Citrus Sinensis ID: 041898

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-----
MAYKIVTLFLLLTLSLPLNLQCTRSPNWIRGGYWHAHSELPIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRNPSVVTLLSIWGGAIFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPDKGTNITKLGTLFDEWRAESQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLNFDYYLPTRDNFTGAHSALYSSSRWFNTNDTVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHAFQLSNDDKWELYSAEKQPADVGNYREIRSSGHAV
cHHHHHHHHHHHHHHccccEEEEccccEEEEEEEcccccccccccccccccEEEEEEEEEEccccEEEEccccHHHHHHHHHHHHHcccccEEEEEEccccccHHcccccHHHHHHHHHHHHHHHHcccccEEEccccccccccHHHHHHHHHHHHHHcccEEEEEEccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEccccccccEEEcccccccccccccccccccccccHHHHHHHHHHHcccccEEEEEcccEEEEEEEccEEEEEccHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccHHHHHHHHccccccc
cHHHHHHHHHHHHHHcccEEEEEEcccHHHHHcccccccccccccccccccEEEEEEEEcccccEEEccccccHHHHHHHHHHHHHHccccEEEEEEccccccHHHcccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHccccHHHEEEEccccccEEEEEccccccccccccccccccccHHHHHHHHHHHHccccccEEEEcccccccEEEcccEEEEcccHHHHHHHHHHHHHHcccEEEEEcHHHccccccccccccHHHHHHHHHHHcccccc
MAYKIVTLFLLLTLslplnlqctrspnwirggywhahselpIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRNPSVVTLLSIWggaifssminqssnrkSFIKSSVEMARFngfhgldlhgvlpdkgtnitklGTLFDEWRAESQLLLVMTShhlpalesvsypldsmqrnLDWIHVLnfdyylptrdnftgaHSALYsssrwfntndtvlglpyhgyawtlvnpdenpvgspatgpaitidgsvgFKFIKGFIRdygygaasvynHSYVMNFFSAKTTWVNFDGVETIRSKVSFakekgllgyhafqlsnddkwelysaekqpadvgnyreirssghav
MAYKIVTLFLLLTLSLPLNLQCTRSPNWIRGGYWHAHSELPIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRNPSVVTLLSIWGGAIFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPDKGTNITKLGTLFDEWRAESQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLNFDYYLPTRDNFTGAHSALYSSSRWFNTNDTVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHAFQLSNDDKWELYSAEkqpadvgnyreirssghav
MAYKIVTlfllltlslplnlQCTRSPNWIRGGYWHAHSELPIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRNPSVVTLLSIWGGAIFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPDKGTNITKLGTLFDEWRAESQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLNFDYYLPTRDNFTGAHSALYSSSRWFNTNDTVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHAFQLSNDDKWELYSAEKQPADVGNYREIRSSGHAV
**YKIVTLFLLLTLSLPLNLQCTRSPNWIRGGYWHAHSELPIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRNPSVVTLLSIWGGAIFSSMINQ*****SFIKSSVEMARFNGFHGLDLHGVLPDKGTNITKLGTLFDEWRAESQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLNFDYYLPTRDNFTGAHSALYSSSRWFNTNDTVLGLPYHGYAWTLVNPDEN*VG*PATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHAFQLSNDDKWELY**********************
*AYKIVTLFLLLTLSLPLNLQCTRSPNWIRGGYWHAHSELPIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRNPSVVTLLSIWGGAIFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPDKGTNITKLGTLFDEWRAESQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLNFDYYLPTRDNFTGAHSALYSSSRWFNTNDTVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHAFQLSNDDKWELYSAEKQPADVGNYREIRS*****
MAYKIVTLFLLLTLSLPLNLQCTRSPNWIRGGYWHAHSELPIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRNPSVVTLLSIWGGAIFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPDKGTNITKLGTLFDEWRAESQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLNFDYYLPTRDNFTGAHSALYSSSRWFNTNDTVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHAFQLSNDDKWELYSAEKQPADVGNYRE********
MAYKIVTLFLLLTLSLPLNLQCTRSPNWIRGGYWHAHSELPIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRNPSVVTLLSIWGGAIFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPDKGTNITKLGTLFDEWRAESQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLNFDYYLPTRDNFTGAHSALYSSSRWFNTNDTVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHAFQLSNDDKWELYSAEKQPADVGNYREIRS*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAYKIVTLFLLLTLSLPLNLQCTRSPNWIRGGYWHAHSELPIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRNPSVVTLLSIWGGAIFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPDKGTNITKLGTLFDEWRAESQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLNFDYYLPTRDNFTGAHSALYSSSRWFNTNDTVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHAFQLSNDDKWELYSAEKQPADVGNYREIRSSGHAV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query355 2.2.26 [Sep-21-2011]
Q9D7Q1464 Chitotriosidase-1 OS=Mus yes no 0.766 0.586 0.259 3e-21
Q5RBP6410 Chitinase-3-like protein yes no 0.676 0.585 0.298 2e-20
Q13231466 Chitotriosidase-1 OS=Homo yes no 0.825 0.628 0.252 8e-20
P36222383 Chitinase-3-like protein no no 0.676 0.626 0.291 2e-19
Q29411383 Chitinase-3-like protein yes no 0.676 0.626 0.291 5e-19
Q6TMG6361 Chitinase-3-like protein N/A no 0.676 0.664 0.288 7e-19
Q9WTV1381 Chitinase-3-like protein no no 0.783 0.729 0.298 1e-18
P30922383 Chitinase-3-like protein yes no 0.659 0.610 0.302 2e-18
Q15782390 Chitinase-3-like protein no no 0.777 0.707 0.280 2e-18
Q7YS85361 Chitinase-3-like protein N/A no 0.774 0.761 0.277 2e-18
>sp|Q9D7Q1|CHIT1_MOUSE Chitotriosidase-1 OS=Mus musculus GN=Chit1 PE=1 SV=2 Back     alignment and function desciption
 Score =  103 bits (256), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 153/331 (46%), Gaps = 59/331 (17%)

Query: 44  EIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRNPSVVTLLSI----WG 99
           ++   L +H++  FAF     + +     +++      N++K +NP + TLL++    +G
Sbjct: 45  DVDPNLCTHVI--FAFAGMDNHQLSTVEHNDELLYQELNSLKTKNPKLKTLLAVGGWTFG 102

Query: 100 GAIFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLP--------DKGTNITKLGTL 151
              F+ M+  +SNR++F+KS++   R  GF GLDL    P        DK      +  L
Sbjct: 103 TQKFTDMVATASNRQTFVKSALSFLRTQGFDGLDLDWEFPGGRGSPTVDKERFTALIQDL 162

Query: 152 FDEWRAESQ------LLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLNFDYYLPTRDNF 205
              ++ E+Q      LLL         L    Y +D + ++LD+I+++ +D++  + +  
Sbjct: 163 AKAFQEEAQSSGKERLLLTAAVPSDRGLVDAGYEVDKIAQSLDFINLMAYDFH-SSLEKT 221

Query: 206 TGAHSALYSS----------------SRWFN----TNDTVLGLPYHGYAWTLVNPDENPV 245
           TG +S LY                  + W       +  +LG+P +G ++TL +  +N V
Sbjct: 222 TGHNSPLYKRQGESGAAAEQNVDAAVTLWLQKGTPASKLILGMPTYGRSFTLASSSDNGV 281

Query: 246 GSPATGPAITIDGSVGFKFIKGFIRDYG----YGAASVYNHSYVMN----FFSAKTTWVN 297
           G+PATGP     G+ G      + +D G    Y A S      + +    +      WV+
Sbjct: 282 GAPATGP-----GAPG-----PYTKDKGVLAYYEACSWKERHRIEDQKVPYAFQDNQWVS 331

Query: 298 FDGVETIRSKVSFAKEKGLLGYHAFQLSNDD 328
           FD VE+ ++K ++ K+KGL G   + L  DD
Sbjct: 332 FDDVESFKAKAAYLKQKGLGGAMVWVLDLDD 362
Degrades chitin, chitotriose and chitobiose. May participate in the defense against nematodes and other pathogens.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4
>sp|Q5RBP6|CH3L1_PONAB Chitinase-3-like protein 1 OS=Pongo abelii GN=CHI3L1 PE=2 SV=1 Back     alignment and function description
>sp|Q13231|CHIT1_HUMAN Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1 Back     alignment and function description
>sp|P36222|CH3L1_HUMAN Chitinase-3-like protein 1 OS=Homo sapiens GN=CHI3L1 PE=1 SV=2 Back     alignment and function description
>sp|Q29411|CH3L1_PIG Chitinase-3-like protein 1 OS=Sus scrofa GN=CHI3L1 PE=1 SV=2 Back     alignment and function description
>sp|Q6TMG6|CH3L1_SHEEP Chitinase-3-like protein 1 OS=Ovis aries GN=CHI3L1 PE=1 SV=1 Back     alignment and function description
>sp|Q9WTV1|CH3L1_RAT Chitinase-3-like protein 1 OS=Rattus norvegicus GN=Chi3l1 PE=2 SV=3 Back     alignment and function description
>sp|P30922|CH3L1_BOVIN Chitinase-3-like protein 1 OS=Bos taurus GN=CHI3L1 PE=1 SV=3 Back     alignment and function description
>sp|Q15782|CH3L2_HUMAN Chitinase-3-like protein 2 OS=Homo sapiens GN=CHI3L2 PE=1 SV=1 Back     alignment and function description
>sp|Q7YS85|CH3L1_BUBBU Chitinase-3-like protein 1 OS=Bubalus bubalis GN=CHI3L1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query355
224142429375 predicted protein [Populus trichocarpa] 0.915 0.866 0.5 1e-101
359497026 738 PREDICTED: G-type lectin S-receptor-like 0.963 0.463 0.482 2e-95
359497679359 PREDICTED: chitotriosidase-1-like [Vitis 0.918 0.908 0.502 1e-94
359484771 781 PREDICTED: G-type lectin S-receptor-like 0.895 0.407 0.479 2e-91
296088199 1130 unnamed protein product [Vitis vinifera] 0.918 0.288 0.476 6e-91
255565055 721 conserved hypothetical protein [Ricinus 0.867 0.427 0.455 5e-85
356558668 909 PREDICTED: uncharacterized protein LOC10 0.952 0.371 0.420 6e-82
224142425 763 predicted protein [Populus trichocarpa] 0.926 0.431 0.438 5e-78
5814093 739 receptor-like kinase CHRK1 [Nicotiana ta 0.814 0.391 0.437 4e-74
147787796 658 hypothetical protein VITISV_036051 [Viti 0.833 0.449 0.408 4e-68
>gi|224142429|ref|XP_002324560.1| predicted protein [Populus trichocarpa] gi|222865994|gb|EEF03125.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 183/366 (50%), Positives = 256/366 (69%), Gaps = 41/366 (11%)

Query: 7   TLFLLLTLS-LPLNLQCTRSPNWIRGGYWHAHSELPIAEIHSALFSHLMCAFAFINSSTY 65
           T+ LL + + L    +C+ +  WI+ GYW+  S+ PI +I+SALF+HL+CAFA +NSSTY
Sbjct: 6   TIILLFSFAFLSSQNRCSVAQKWIKAGYWYGGSDFPIPDINSALFTHLLCAFANVNSSTY 65

Query: 66  NIFINSTSEQFFVIFTNTVKHRNPSVVTLLSIWGG---------------AIFSSMINQS 110
            + I S  +Q F IFT  VK +NPS+VTLLSIW G               ++ SSM+ QS
Sbjct: 66  ELSIPSDFQQNFSIFTGIVKRKNPSIVTLLSIWNGQAETYKSIIGEAVNSSVLSSMLTQS 125

Query: 111 SNRKSFIKSSVEMARFNGFHGLDLHGVLPDKGTNITKLGTLFDEWRAE----------SQ 160
           S RKSFI+SSV+ AR  GF G+DL  + P+  T+++ +GTL DEWRA           S+
Sbjct: 126 SYRKSFIESSVKTARTLGFQGIDLFWLWPNS-TDLSNIGTLLDEWRATVDSEPRNSSVSK 184

Query: 161 LLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLNFDYYLPTRDNFTGAHSALYSS----- 215
           L+L M   + P+L+SVSYP++SM+RNLDW HV+ +DY++P+R+NFTG H+ALY+      
Sbjct: 185 LILTMGVRYSPSLQSVSYPINSMKRNLDWAHVVAYDYHMPSRENFTGNHAALYNPSSNIS 244

Query: 216 ---------SRWFNTNDTVLGLPYHGYAWTLVNPDENPVGSPATGPAITIDGSVGFKFIK 266
                    SR +  N  +LG+PYHGYAW LV+P +N +G+PA+GP +TIDGS+G++F++
Sbjct: 245 TDFGIREWLSRGYPANKLLLGMPYHGYAWKLVDPTDNSLGAPASGPGVTIDGSIGYRFVR 304

Query: 267 GFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHAFQLSN 326
            FI++YGYGA SVYN +YV+N+F A +TW+NFD VET+R+K+S+AKEKGLLGY+ FQ+ N
Sbjct: 305 SFIQNYGYGARSVYNSTYVVNYFVAGSTWINFDDVETVRAKISYAKEKGLLGYNVFQVIN 364

Query: 327 DDKWEL 332
           DD W L
Sbjct: 365 DDNWAL 370

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359497026|ref|XP_003635401.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|359497679|ref|XP_003635605.1| PREDICTED: chitotriosidase-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359484771|ref|XP_003633158.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296088199|emb|CBI35714.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255565055|ref|XP_002523520.1| conserved hypothetical protein [Ricinus communis] gi|223537227|gb|EEF38859.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356558668|ref|XP_003547625.1| PREDICTED: uncharacterized protein LOC100787480 [Glycine max] Back     alignment and taxonomy information
>gi|224142425|ref|XP_002324558.1| predicted protein [Populus trichocarpa] gi|222865992|gb|EEF03123.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|5814093|gb|AAD52097.1|AF088885_1 receptor-like kinase CHRK1 [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|147787796|emb|CAN60684.1| hypothetical protein VITISV_036051 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query355
TAIR|locus:2133955369 AT4G19760 [Arabidopsis thalian 0.487 0.468 0.401 3.7e-46
TAIR|locus:2134020332 AT4G19730 [Arabidopsis thalian 0.529 0.566 0.384 8.4e-41
TAIR|locus:2134025379 ChiC "class V chitinase" [Arab 0.552 0.517 0.404 1.7e-36
TAIR|locus:2134030366 AT4G19820 [Arabidopsis thalian 0.521 0.505 0.391 9.8e-32
TAIR|locus:2134015398 AT4G19800 [Arabidopsis thalian 0.521 0.464 0.366 2.7e-29
TAIR|locus:2133940362 AT4G19750 [Arabidopsis thalian 0.552 0.541 0.358 3.1e-28
TAIR|locus:2133970261 AT4G19770 [Arabidopsis thalian 0.498 0.678 0.352 2.5e-26
TAIR|locus:2134010363 AT4G19720 [Arabidopsis thalian 0.478 0.468 0.365 4.6e-25
ZFIN|ZDB-GENE-071004-113 481 chia.5 "chitinase, acidic.5" [ 0.487 0.359 0.312 2.8e-20
ZFIN|ZDB-GENE-040426-2891471 chia.3 "chitinase, acidic.3" [ 0.487 0.367 0.305 5.1e-19
TAIR|locus:2133955 AT4G19760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 326 (119.8 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
 Identities = 75/187 (40%), Positives = 113/187 (60%)

Query:    41 PIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRNPSVVTLLSIWGG 100
             P + I S LF+HL CAFA ++SST+ + I++ +   F  FT TVK +N  V TLLSI G 
Sbjct:    36 PSSFIDSTLFTHLFCAFADVDSSTHEVTISAANSYQFSSFTETVKEKNTDVQTLLSIGGK 95

Query:   101 ----AIFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPDKGTNITKLGTLFDEWR 156
                 A+ +SM + S NRK+FI SS+++AR   F+GLDL    P     +T  G L +EWR
Sbjct:    96 DADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWEYPSNDVEMTNFGKLLEEWR 155

Query:   157 A----ES----QLLLVMTS--HHLPALESVSYPLDSMQRNLDWIHVLNFDYYLPTRDNFT 206
             A    ES    QL L++T+  ++ P  + V YP+ ++  NLD+++++ +D+Y P     T
Sbjct:   156 AAVVEESDKTNQLPLLLTAAVYYSPQYDGVEYPVKAIADNLDFVNIMAYDFYGPGWSPVT 215

Query:   207 GAHSALY 213
             G  +AL+
Sbjct:   216 GPPAALF 222
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0004568 "chitinase activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
TAIR|locus:2134020 AT4G19730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134025 ChiC "class V chitinase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134030 AT4G19820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134015 AT4G19800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133940 AT4G19750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133970 AT4G19770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134010 AT4G19720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-071004-113 chia.5 "chitinase, acidic.5" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2891 chia.3 "chitinase, acidic.3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
grail3.0020033001
hypothetical protein (375 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
cd02879299 cd02879, GH18_plant_chitinase_class_V, The class V 4e-89
smart00636334 smart00636, Glyco_18, Glyco_18 domain 4e-49
pfam00704325 pfam00704, Glyco_hydro_18, Glycosyl hydrolases fam 6e-44
cd02872362 cd02872, GH18_chitolectin_chitotriosidase, This co 6e-32
cd00598210 cd00598, GH18_chitinase-like, The GH18 (glycosyl h 1e-18
cd06548322 cd06548, GH18_chitinase, The GH18 (glycosyl hydrol 3e-12
COG3325441 COG3325, ChiA, Chitinase [Carbohydrate transport a 1e-10
cd02873413 cd02873, GH18_IDGF, The IDGF's (imaginal disc grow 7e-09
cd06545253 cd06545, GH18_3CO4_chitinase, The Bacteroides thet 4e-06
>gnl|CDD|119358 cd02879, GH18_plant_chitinase_class_V, The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information 
 Score =  269 bits (689), Expect = 4e-89
 Identities = 120/340 (35%), Positives = 170/340 (50%), Gaps = 75/340 (22%)

Query: 26  PNWIRGGYWHAHS-ELPIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTV 84
              ++GGYW A S E P + I S+LF+HL  AFA ++ STY + I+ + E  F  FT TV
Sbjct: 1   STIVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETV 60

Query: 85  KHRNPSVVTLLSIWGGA----IFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPD 140
           K +NPSV TLLSI GG      F++M +  + RK+FI SS+++AR  GF GLDL    P 
Sbjct: 61  KRKNPSVKTLLSIGGGGSDSSAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPS 120

Query: 141 KGTNITKLGTLFDEWRAESQ----------LLLVMTSHHLPAL----ESVSYPLDSMQRN 186
               +   G L +EWRA  +          LLL    +  P L    +SVSYP++++ +N
Sbjct: 121 SQVEMENFGKLLEEWRAAVKDEARSSGRPPLLLTAAVYFSPILFLSDDSVSYPIEAINKN 180

Query: 187 LDWIHVLNFDYYLPTRDNFTGAHSALYSSSRWFNTND--------------TVLGLPYHG 232
           LDW++V+ +DYY     N TG  +ALY  +   +T+                VLGLP +G
Sbjct: 181 LDWVNVMAYDYYGSWESNTTGPAAALYDPNSNVSTDYGIKSWIKAGVPAKKLVLGLPLYG 240

Query: 233 YAWTLVNPDENPVGSPATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAK 292
            AWTL                                          Y+ + V ++  A 
Sbjct: 241 RAWTL------------------------------------------YDTTTVSSYVYAG 258

Query: 293 TTWVNFDGVETIRSKVSFAKEKGLLGYHAFQLSNDDKWEL 332
           TTW+ +D V++I  KV +AK+KGLLGY A+ +  DD   L
Sbjct: 259 TTWIGYDDVQSIAVKVKYAKQKGLLGYFAWAVGYDDNNWL 298

The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. Length = 299
>gnl|CDD|214753 smart00636, Glyco_18, Glyco_18 domain Back     alignment and domain information
>gnl|CDD|216071 pfam00704, Glyco_hydro_18, Glycosyl hydrolases family 18 Back     alignment and domain information
>gnl|CDD|119351 cd02872, GH18_chitolectin_chitotriosidase, This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information
>gnl|CDD|119349 cd00598, GH18_chitinase-like, The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>gnl|CDD|119365 cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>gnl|CDD|225862 COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|119352 cd02873, GH18_IDGF, The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>gnl|CDD|119362 cd06545, GH18_3CO4_chitinase, The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 355
cd02872362 GH18_chitolectin_chitotriosidase This conserved do 100.0
cd02873413 GH18_IDGF The IDGF's (imaginal disc growth factors 100.0
cd02879299 GH18_plant_chitinase_class_V The class V plant chi 100.0
COG3325441 ChiA Chitinase [Carbohydrate transport and metabol 100.0
cd02878345 GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin 100.0
KOG2806432 consensus Chitinase [Carbohydrate transport and me 100.0
smart00636334 Glyco_18 Glycosyl hydrolase family 18. 100.0
cd06548322 GH18_chitinase The GH18 (glycosyl hydrolases, fami 100.0
cd02876318 GH18_SI-CLP Stabilin-1 interacting chitinase-like 100.0
PF00704343 Glyco_hydro_18: Glycosyl hydrolases family 18; Int 100.0
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 100.0
cd02874313 GH18_CFLE_spore_hydrolase Cortical fragment-lytic 100.0
cd06549298 GH18_trifunctional GH18 domain of an uncharacteriz 100.0
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 100.0
cd00598210 GH18_chitinase-like The GH18 (glycosyl hydrolase, 100.0
COG3858423 Predicted glycosyl hydrolase [General function pre 100.0
cd06544253 GH18_narbonin Narbonin is a plant 2S protein from 100.0
cd06546256 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 100.0
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 99.97
KOG2091392 consensus Predicted member of glycosyl hydrolase f 99.94
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 99.93
cd02877280 GH18_hevamine_XipI_class_III This conserved domain 99.91
cd06543294 GH18_PF-ChiA-like PF-ChiA is an uncharacterized ch 99.88
COG3469332 Chitinase [Carbohydrate transport and metabolism] 99.67
KOG4701 568 consensus Chitinase [Cell wall/membrane/envelope b 99.41
cd06547339 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG 98.24
PF13200316 DUF4015: Putative glycosyl hydrolase domain 97.63
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 97.54
PF03644311 Glyco_hydro_85: Glycosyl hydrolase family 85 ; Int 97.53
PF11340181 DUF3142: Protein of unknown function (DUF3142); In 97.22
KOG2331 526 consensus Predicted glycosylhydrolase [General fun 94.06
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 92.57
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 92.55
cd02930353 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin 91.52
COG1306400 Uncharacterized conserved protein [Function unknow 89.47
cd04734343 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN 89.09
TIGR01370315 cysRS possible cysteinyl-tRNA synthetase, Methanoc 88.94
PF13199559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 87.16
cd04735353 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN 86.53
COG1649418 Uncharacterized protein conserved in bacteria [Fun 85.18
cd02803327 OYE_like_FMN_family Old yellow enzyme (OYE)-like F 83.35
cd02932336 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN 81.83
PF02684373 LpxB: Lipid-A-disaccharide synthetase; InterPro: I 81.68
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 81.46
cd02801231 DUS_like_FMN Dihydrouridine synthase-like (DUS-lik 81.38
PRK12568 730 glycogen branching enzyme; Provisional 81.29
PRK10550312 tRNA-dihydrouridine synthase C; Provisional 80.77
cd04733338 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN 80.43
TIGR02103 898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 80.26
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information 
Probab=100.00  E-value=2e-66  Score=493.93  Aligned_cols=313  Identities=29%  Similarity=0.471  Sum_probs=274.8

Q ss_pred             EEEEecCCC-------CCCccccCCCCccEEEEEEEEEeCCCcEEEeCCC---ChHHHHHHHHHHHhcCCCcEEEEEEcC
Q 041898           30 RGGYWHAHS-------ELPIAEIHSALFSHLMCAFAFINSSTYNIFINST---SEQFFVIFTNTVKHRNPSVVTLLSIWG   99 (355)
Q Consensus        30 ~~~Y~~~~~-------~~~~~~~~~~~~thvi~~f~~~~~~~~~~~~~~~---~~~~~~~~~~~lk~~~~~~kvllsiGG   99 (355)
                      ++|||+.|.       .|.+++++.++||||+|+|+.++++|........   +...+.++. .+|++||++||++||||
T Consensus         1 v~~y~~~w~~~~~~~~~~~~~~i~~~~~Thv~y~f~~i~~~g~~~~~~~~~d~~~~~~~~~~-~lk~~~p~lkvlisiGG   79 (362)
T cd02872           1 VVCYFTNWAQYRPGNGKFVPENIDPFLCTHIIYAFAGLNPDGNIIILDEWNDIDLGLYERFN-ALKEKNPNLKTLLAIGG   79 (362)
T ss_pred             CEEEECcchhcCCCCCCcChhHCCcccCCEEEEeeEEECCCCCEEecCchhhhhhhHHHHHH-HHHhhCCCceEEEEEcC
Confidence            478998832       5788999999999999999999998644333221   345667775 79999999999999999


Q ss_pred             Cc----chhhhhcCcHHHHHHHHHHHHHHHcCCCCEEEEEccCCCC----CccHHHHHHHHHHHHc---cC--CcEEEEE
Q 041898          100 GA----IFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPDK----GTNITKLGTLFDEWRA---ES--QLLLVMT  166 (355)
Q Consensus       100 ~~----~~~~~~~~~~~r~~fi~~i~~~l~~~~~DGIdiDwE~~~~----~~~~~~~~~~l~~lr~---~~--~~~ls~a  166 (355)
                      |.    .|+.++++++.|++||+++++++++|+|||||||||+|..    ++++++|+.||++||+   ..  +++||++
T Consensus        80 ~~~~~~~f~~~~~~~~~r~~fi~~iv~~l~~~~~DGidiDwE~p~~~~~~~~d~~~~~~ll~~lr~~l~~~~~~~~ls~a  159 (362)
T cd02872          80 WNFGSAKFSAMAASPENRKTFIKSAIAFLRKYGFDGLDLDWEYPGQRGGPPEDKENFVTLLKELREAFEPEAPRLLLTAA  159 (362)
T ss_pred             CCCCcchhHHHhCCHHHHHHHHHHHHHHHHHcCCCCeeeeeeccccCCCCHHHHHHHHHHHHHHHHHHHhhCcCeEEEEE
Confidence            86    6999999999999999999999999999999999999974    5789999999999999   33  7999999


Q ss_pred             eccCCcccccCCChhhhhccCcEEEEeeccCcCCCCCCCCCCCCCCCCcc---------c-------ccc----cCceEE
Q 041898          167 SHHLPALESVSYPLDSMQRNLDWIHVLNFDYYLPTRDNFTGAHSALYSSS---------R-------WFN----TNDTVL  226 (355)
Q Consensus       167 ~~~~~~~~~~~yd~~~l~~~vD~v~vm~YD~~~~~~~~~~g~~apl~~~~---------~-------~~~----~~Klvl  226 (355)
                      +|+.+......||+++|.+++|+|+||+||++++| +..+|++|||+...         .       |++    |+||+|
T Consensus       160 v~~~~~~~~~~~d~~~l~~~vD~v~vmtYD~~~~~-~~~~g~~spl~~~~~~~~~~~~~~v~~~v~~~~~~gvp~~Klvl  238 (362)
T cd02872         160 VSAGKETIDAAYDIPEISKYLDFINVMTYDFHGSW-EGVTGHNSPLYAGSADTGDQKYLNVDYAIKYWLSKGAPPEKLVL  238 (362)
T ss_pred             ecCChHHHhhcCCHHHHhhhcceEEEecccCCCCC-CCCCCCCCCCCCCCCCccccccccHHHHHHHHHHcCCCHHHeEe
Confidence            99877666667999999999999999999999997 57899999997421         0       443    999999


Q ss_pred             eceeeeeeeEecCCCCCCCCCCccCCCC-----CCCCccchHHHHHhhhcCCCceeEEEecCceeeEEEeCCEEEEeCCH
Q 041898          227 GLPYHGYAWTLVNPDENPVGSPATGPAI-----TIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGV  301 (355)
Q Consensus       227 Glp~yG~~~~~~~~~~~~~~~p~~~~~~-----~~~g~~~y~ei~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~v~ydd~  301 (355)
                      |||+|||.|++.+..++++|+|+.+++.     .++|.++|.|||+.+ +.+  ++..||+.+++||.+.+++||+|||+
T Consensus       239 Glp~YG~~~~~~~~~~~~~g~~~~g~~~~g~~~~~~g~~~y~ei~~~~-~~~--~~~~~D~~~~~~y~~~~~~~v~ydd~  315 (362)
T cd02872         239 GIPTYGRSFTLASPSNTGVGAPASGPGTAGPYTREAGFLAYYEICEFL-KSG--WTVVWDDEQKVPYAYKGNQWVGYDDE  315 (362)
T ss_pred             ccccccceeeecCCccCCCCCccCCCCCCCCCcCCCccchHHHHHHhh-cCC--cEEEEeCCcceeEEEECCEEEEeCCH
Confidence            9999999999998888888999877653     367899999999987 667  89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCEEEEEecCCCCCcchhhhcccccccccccc
Q 041898          302 ETIRSKVSFAKEKGLLGYHAFQLSNDDKWELYSAEKQPADVGNYRE  347 (355)
Q Consensus       302 ~S~~~K~~~~~~~gl~Gv~iW~l~~Dd~~~l~~~~~~~l~~~~~~~  347 (355)
                      +|++.|++|++++||||+++|++++||+.+.|+...+||+++|++.
T Consensus       316 ~Si~~K~~~~~~~~lgGv~iW~l~~DD~~g~cg~~~~pLl~~i~~~  361 (362)
T cd02872         316 ESIALKVQYLKSKGLGGAMVWSIDLDDFRGTCGQGKYPLLNAINRA  361 (362)
T ss_pred             HHHHHHHHHHHhCCCceEEEEeeecCcCCCccCCCCCcHHHHHHHh
Confidence            9999999999999999999999999999999998899999999764

The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information
>COG3325 ChiA Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02878 GH18_zymocin_alpha Zymocin, alpha subunit Back     alignment and domain information
>KOG2806 consensus Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00636 Glyco_18 Glycosyl hydrolase family 18 Back     alignment and domain information
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome Back     alignment and domain information
>PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination Back     alignment and domain information
>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>COG3858 Predicted glycosyl hydrolase [General function prediction only] Back     alignment and domain information
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L Back     alignment and domain information
>cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>KOG2091 consensus Predicted member of glycosyl hydrolase family 18 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain Back     alignment and domain information
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain Back     alignment and domain information
>COG3469 Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PF03644 Glyco_hydro_85: Glycosyl hydrolase family 85 ; InterPro: IPR005201 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF11340 DUF3142: Protein of unknown function (DUF3142); InterPro: IPR021488 This bacterial family of proteins has no known function Back     alignment and domain information
>KOG2331 consensus Predicted glycosylhydrolase [General function prediction only] Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain Back     alignment and domain information
>COG1306 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 Back     alignment and domain information
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4 Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain Back     alignment and domain information
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>cd02801 DUS_like_FMN Dihydrouridine synthase-like (DUS-like) FMN-binding domain Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK10550 tRNA-dihydrouridine synthase C; Provisional Back     alignment and domain information
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2 Back     alignment and domain information
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
3aqu_A356 Crystal Structure Of A Class V Chitinase From Arabi 2e-62
3alg_A353 Crystal Structure Of Class V Chitinase (E115q Mutan 4e-56
3alf_A353 Crystal Structure Of Class V Chitinase From Nicotia 5e-56
1waw_A445 Specificity And Affinity Of Natural Product Cyclope 4e-21
1hki_A365 Crystal Structure Of Human Chitinase In Complex Wit 4e-21
1lg1_A365 Crystal Structure Of Human Chitotriosidase In Compl 4e-21
1guv_A366 Structure Of Human Chitotriosidase Length = 366 4e-21
1hkk_A364 High Resoultion Crystal Structure Of Human Chitinas 4e-21
1hjv_A362 Crystal Structure Of Hcgp-39 In Complex With Chitin 1e-20
2pi6_A361 Crystal Structure Of The Sheep Signalling Glycoprot 5e-20
1sr0_A361 Crystal Structure Of Signalling Protein From Sheep( 5e-20
1xhg_A361 Crystal Structure Of A 40 Kda Signalling Protein Fr 7e-20
4ay1_A365 Human Ykl-39 Is A Pseudo-Chitinase With Retained Ch 2e-19
1tfv_A361 Crystal Structure Of A Buffalo Signaling Glycoprote 2e-19
1owq_A361 Crystal Structure Of A 40 Kda Signalling Protein (S 6e-19
1zbv_A361 Crystal Structure Of The Goat Signalling Protein (S 7e-19
2esc_A361 Crystal Structure Of A 40 Kda Protective Signalling 8e-19
1e9l_A377 The Crystal Structure Of Novel Mammalian Lectin Ym1 1e-18
1syt_A361 Crystal Structure Of Signalling Protein From Goat S 4e-18
1ljy_A361 Crystal Structure Of A Novel Regulatory 40 Kda Mamm 5e-18
3fxy_A395 Acidic Mammalian Chinase, Catalytic Domain Length = 1e-13
2ybt_A381 Crystal Structure Of Human Acidic Chitinase In Comp 2e-13
3ars_A584 Crystal Structure Analysis Of Chitinase A From Vibr 9e-07
3b9a_A584 Crystal Structure Of Vibrio Harveyi Chitinase A Com 5e-06
3b8s_A584 Crystal Structure Of Wild-Type Chitinase A From Vib 1e-05
3g6l_A406 The Crystal Structure Of A Chitinase Crchi1 From Th 2e-05
1itx_A419 Catalytic Domain Of Chitinase A1 From Bacillus Circ 9e-05
3qok_A420 Crystal Structure Of Putative Chitinase Ii From Kle 2e-04
1jnd_A420 Crystal Structure Of Imaginal Disc Growth Factor-2 3e-04
1w9p_A433 Specificity And Affinity Of Natural Product Cyclope 3e-04
1wno_A395 Crystal Structure Of A Native Chitinase From Asperg 3e-04
>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  235 bits (600), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 132/343 (38%), Positives = 193/343 (56%), Gaps = 31/343 (9%)
Query: 29  IRGGYWHAHSELPIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRN 88
           ++  YW   SE P+ +I S+LF+HL CAFA +NS T  + ++S ++  F  FT TV+ RN
Sbjct: 5   VKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQRRN 64
Query: 89  PSVVTLLSIWGG----AIFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPDKGTN 144
           PSV TLLSI GG      ++SM +  ++RKSFI SS+ +AR  GFHGLDL    P   T 
Sbjct: 65  PSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATE 124
Query: 145 ITKLGTLFDEWRA----------ESQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHVLN 194
           +T  GTL  EWR+          + +LLL     +     SV YP+ ++  +LDW++++ 
Sbjct: 125 MTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMA 184
Query: 195 FDYYLPTRDNFTGAHSALYSSSRWFNTND---------------TVLGLPYHGYAWTLVN 239
           +D+Y P     TG  +AL+  S    + D                VLG PY+GYAW L N
Sbjct: 185 YDFYGPGWSRVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTN 244
Query: 240 PDENPVGSPATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFD 299
            + +   +P TG AI+ DGS+G+  I+ FI D   GA +VYN + V ++  A T W+ +D
Sbjct: 245 ANSHSYYAPTTGAAISPDGSIGYGQIRKFIVD--NGATTVYNSTVVGDYCYAGTNWIGYD 302
Query: 300 GVETIRSKVSFAKEKGLLGYHAFQLSNDDKWELYSAEKQPADV 342
             ++I +KV +AK++GLLGY ++ +  DD   L  A  Q  D 
Sbjct: 303 DNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSRAASQAWDA 345
>pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 Length = 353 Back     alignment and structure
>pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum Length = 353 Back     alignment and structure
>pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitor Argadin Against Human Chitinase Length = 445 Back     alignment and structure
>pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With Glucoallosamidin B Length = 365 Back     alignment and structure
>pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With Chitobiose Length = 365 Back     alignment and structure
>pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase Length = 366 Back     alignment and structure
>pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin Length = 364 Back     alignment and structure
>pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin Tetramer Length = 362 Back     alignment and structure
>pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein (Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a Resolution Reveals Specific Binding Characteristics Of Sps-40 Length = 361 Back     alignment and structure
>pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40) At 3.0a Resolution Using Crystal Grown In The Presence Of Polysaccharides Length = 361 Back     alignment and structure
>pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From Porcine (spp-40) At 2.89a Resolution Length = 361 Back     alignment and structure
>pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained Chitooligosaccharide Binding Properties Length = 365 Back     alignment and structure
>pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein (Spb-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40) Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a Resolution Length = 361 Back     alignment and structure
>pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling Protein From Bovine (Spc-40) At 2.1 A Resolution Length = 361 Back     alignment and structure
>pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1 Suggests A Saccharide Binding Site Length = 377 Back     alignment and structure
>pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40 In The Presense Of N,n',n''-triacetyl-chitotriose At 2.6a Resolution Length = 361 Back     alignment and structure
>pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary Gland Protein (Mgp-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain Length = 395 Back     alignment and structure
>pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex With Bisdionin C Length = 381 Back     alignment and structure
>pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio Harveyi With Novel Inhibitors - Apo Structure Of Mutant W275g Length = 584 Back     alignment and structure
>pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed With Hexasaccharide Length = 584 Back     alignment and structure
>pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio Harveyi Length = 584 Back     alignment and structure
>pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The Nematophagous Fungus Clonostachys Rosea Length = 406 Back     alignment and structure
>pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 Length = 419 Back     alignment and structure
>pdb|3QOK|A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae Length = 420 Back     alignment and structure
>pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2 Length = 420 Back     alignment and structure
>pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human And Bacterial Chitinasefra Length = 433 Back     alignment and structure
>pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus Fumigatus Yj- 407 Length = 395 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 2e-76
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 4e-75
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 2e-56
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 6e-55
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 6e-55
1wb0_A445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 4e-53
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 1e-49
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 4e-37
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 1e-36
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 3e-31
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 5e-31
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 6e-31
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 2e-30
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 7e-29
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 1e-28
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 1e-28
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 6e-28
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 2e-26
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 3e-22
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 6e-21
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 6e-21
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 9e-18
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 6e-12
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 6e-10
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 2e-07
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 2e-05
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Length = 356 Back     alignment and structure
 Score =  238 bits (609), Expect = 2e-76
 Identities = 130/342 (38%), Positives = 192/342 (56%), Gaps = 31/342 (9%)

Query: 27  NWIRGGYWHAHSELPIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKH 86
             ++  YW   SE P+ +I S+LF+HL CAFA +NS T  + ++S ++  F  FT TV+ 
Sbjct: 3   TVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQR 62

Query: 87  RNPSVVTLLSIWGG----AIFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPDKG 142
           RNPSV TLLSI GG      ++SM +  ++RKSFI SS+ +AR  GFHGLDL    P   
Sbjct: 63  RNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSA 122

Query: 143 TNITKLGTLFDEWRAE----------SQLLLVMTSHHLPALESVSYPLDSMQRNLDWIHV 192
           T +T  GTL  EWR+            +LLL     +     SV YP+ ++  +LDW+++
Sbjct: 123 TEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNL 182

Query: 193 LNFDYYLPTRDNFTGAHSALY-SSSRWFNTNDT--------------VLGLPYHGYAWTL 237
           + +D+Y P     TG  +AL+  S+   + +                VLG PY+GYAW L
Sbjct: 183 MAYDFYGPGWSRVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRL 242

Query: 238 VNPDENPVGSPATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVN 297
            N + +   +P TG AI+ DGS+G+  I+ FI D   GA +VYN + V ++  A T W+ 
Sbjct: 243 TNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVD--NGATTVYNSTVVGDYCYAGTNWIG 300

Query: 298 FDGVETIRSKVSFAKEKGLLGYHAFQLSNDDKWELYSAEKQP 339
           +D  ++I +KV +AK++GLLGY ++ +  DD   L  A  Q 
Sbjct: 301 YDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSRAASQA 342
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Length = 353 Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Length = 365 Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Length = 395 Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Length = 377 Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445 Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Length = 361 Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Length = 420 Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Length = 420 Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Length = 433 Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Length = 419 Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Length = 312 Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Length = 392 Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Length = 540 Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Length = 574 Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Length = 406 Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Length = 435 Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Length = 499 Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Length = 584 Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Length = 319 Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Length = 275 Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Length = 393 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Length = 333 Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Length = 290 Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Length = 271 Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Length = 290 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Length = 302 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query355
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 100.0
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 100.0
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 100.0
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 100.0
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 100.0
1wb0_A445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 100.0
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 100.0
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 100.0
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 100.0
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 100.0
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 100.0
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 100.0
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 100.0
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 100.0
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 100.0
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 100.0
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 100.0
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 100.0
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 100.0
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 100.0
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 100.0
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 100.0
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 100.0
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 100.0
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 100.0
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 100.0
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 100.0
3ian_A321 Chitinase; structural genomics, hydrolase, glycosi 100.0
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 100.0
4ac1_X283 Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g 99.97
2gsj_A271 Protein PPL-2; mimosoideae, chimerolectin, endochi 99.97
2hvm_A273 Hevamine; hydrolase, chitinase/lysozyme; 1.80A {He 99.97
2uy2_A294 Endochitinase; carbohydrate metabolism, polysaccha 99.96
1cnv_A299 Concanavalin B; plant chitinase, chitin binding pr 99.96
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 99.95
2xtk_A310 CHIA1, class III chitinase CHIA1; hydrolase, GH18; 99.94
1eok_A290 Endo-beta-N-acetylglucosaminidase F3; alpha/beta-b 99.93
1ta3_A274 XIP-1, xylanase inhibitor protein I; beta alpha ba 99.92
3mu7_A273 XAIP-II, xylanase and alpha-amylase inhibitor prot 99.89
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 99.88
2dsk_A311 Chitinase; catalytic domain, active domain, crysta 99.75
2vtf_A 626 Endo-beta-N-acetylglucosaminidase; hydrolase, fami 97.5
2w91_A 653 Endo-beta-N-acetylglucosaminidase D; hydrolase, N- 97.27
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 90.8
3k30_A 690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 88.95
2aam_A309 Hypothetical protein TM1410; structural genomics, 87.31
3kru_A343 NADH:flavin oxidoreductase/NADH oxidase; homotetra 86.56
3vmn_A 643 Dextranase; TIM barrel, immunoglobrin fold, greek- 85.56
1o94_A 729 Tmadh, trimethylamine dehydrogenase; electron tran 85.11
3gr7_A340 NADPH dehydrogenase; flavin, FMN, beta-alpha-barre 83.21
3hgj_A349 Chromate reductase; TIM barrel, oxidoreductase; HE 82.42
3l5l_A363 Xenobiotic reductase A; TIM barrel, oxidoreductase 80.6
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Back     alignment and structure
Probab=100.00  E-value=9.5e-71  Score=520.31  Aligned_cols=314  Identities=42%  Similarity=0.767  Sum_probs=285.3

Q ss_pred             CcEEEEEecCCCCCCccccCCCCccEEEEEEEEEeCCCcEEEeCCCChHHHHHHHHHHHhcCCCcEEEEEEcCCc----c
Q 041898           27 NWIRGGYWHAHSELPIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRNPSVVTLLSIWGGA----I  102 (355)
Q Consensus        27 ~~~~~~Y~~~~~~~~~~~~~~~~~thvi~~f~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsiGG~~----~  102 (355)
                      ..+++|||-..+.+.+++++.++||||+|+|+.++++++.+...+.++..+.++++.+|+++|++|+|+|||||+    .
T Consensus         3 ~~~~~gY~~~~~~~~~~~i~~~~~THi~yaF~~i~~~~~~v~~~~~~~~~~~~~~~~lk~~~~~lkvllsiGGw~~~~~~   82 (356)
T 3aqu_A            3 TVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQRRNPSVKTLLSIGGGIADKTA   82 (356)
T ss_dssp             CCEEEEEECGGGCCCGGGSCGGGCSEEEEEEEEEETTTTEEECCTTTHHHHHHHHHHHTTTCTTCEEEEEEECTTSCHHH
T ss_pred             ceEEEEEEeCCCCCCHHHCCcccCCEEEEEEEEecCCCCEEEeCCccHHHHHHHHHHHHhhCCCceEEEEECCCCCCcch
Confidence            468899994456789999999999999999999999877888777667788889888999999999999999996    6


Q ss_pred             hhhhhcCcHHHHHHHHHHHHHHHcCCCCEEEEEccCCCCCccHHHHHHHHHHHHc--c--------CCcEEEEEeccCCc
Q 041898          103 FSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPDKGTNITKLGTLFDEWRA--E--------SQLLLVMTSHHLPA  172 (355)
Q Consensus       103 ~~~~~~~~~~r~~fi~~i~~~l~~~~~DGIdiDwE~~~~~~~~~~~~~~l~~lr~--~--------~~~~ls~a~~~~~~  172 (355)
                      |+.+++++++|++||+++++++++|+|||||||||+|..++|+.+|+.||++||+  .        ++++||+++|+.+.
T Consensus        83 f~~~~~~~~~r~~fi~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~~l~~~~~~~g~~~~~Ls~av~~~~~  162 (356)
T 3aqu_A           83 YASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNN  162 (356)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEEESSSE
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHhCCCeEEEEEeecCChhHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEeccCCch
Confidence            9999999999999999999999999999999999999777899999999999998  1        36899999997665


Q ss_pred             ccccCCChhhhhccCcEEEEeeccCcCC-CCCCCCCCCCCCCCccc-----------ccc----cCceEEeceeeeeeeE
Q 041898          173 LESVSYPLDSMQRNLDWIHVLNFDYYLP-TRDNFTGAHSALYSSSR-----------WFN----TNDTVLGLPYHGYAWT  236 (355)
Q Consensus       173 ~~~~~yd~~~l~~~vD~v~vm~YD~~~~-~~~~~~g~~apl~~~~~-----------~~~----~~KlvlGlp~yG~~~~  236 (355)
                      ....+||+++|.+++||||||+||+||+ | +..+||+|||+.+..           |++    |+||+||+|+|||.|+
T Consensus       163 ~~~~~~d~~~l~~~vD~inlMtYD~~g~~w-~~~~g~~apl~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~YGr~~~  241 (356)
T 3aqu_A          163 YYSVLYPVSAVASSLDWVNLMAYDFYGPGW-SRVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYGYAWR  241 (356)
T ss_dssp             ETTEECCHHHHHHHCSEEEEECCCCCCTTT-CSBCCCTTCSCCTTCSSCCHHHHHHHHHHTTCCGGGEEEEEESEEEEEE
T ss_pred             hhhccCCHHHHhhhccEEEEEeeecccCCC-CCCcCCCCcCCCCCCCCccHHHHHHHHHHcCCCHHHEEEEeccceeeeE
Confidence            5445699999999999999999999998 7 578999999984321           554    9999999999999999


Q ss_pred             ecCCCCCCCCCCccCCCCCCCCccchHHHHHhhhcCCCceeEEEecCceeeEEEeCCEEEEeCCHHHHHHHHHHHHHcCC
Q 041898          237 LVNPDENPVGSPATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGL  316 (355)
Q Consensus       237 ~~~~~~~~~~~p~~~~~~~~~g~~~y~ei~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~v~ydd~~S~~~K~~~~~~~gl  316 (355)
                      +.++.++++++|+.|++..++|.++|.|||+++++.+  ++..||+++++||+|.+++||+|||++|++.|++|++++||
T Consensus       242 ~~~~~~~~~~~p~~g~~~~~~g~~~y~ei~~~l~~~g--~~~~~D~~~~~~y~y~~~~~v~ydd~~Si~~K~~~~~~~gL  319 (356)
T 3aqu_A          242 LTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNG--ATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGL  319 (356)
T ss_dssp             ESCTTCCSTTCBEEEECSSTTCEEEHHHHHHHHHHHT--CEEEEETTTTEEEEEETTEEEEECCHHHHHHHHHHHHHTTC
T ss_pred             ecCCcCCCCCCCCCCCCCCCCCeeeHHHHHHHHhcCC--CeEEEchhhceEEEEeCCEEEEeCCHHHHHHHHHHHHhCCC
Confidence            9998899999999988877889999999999988888  99999999999999999999999999999999999999999


Q ss_pred             CEEEEEecCCCCCcchhhhcccccccc
Q 041898          317 LGYHAFQLSNDDKWELYSAEKQPADVG  343 (355)
Q Consensus       317 ~Gv~iW~l~~Dd~~~l~~~~~~~l~~~  343 (355)
                      ||+|+|+|++||.+.+++++++.|...
T Consensus       320 gGv~~W~l~~Dd~~~ll~a~~~~l~~~  346 (356)
T 3aqu_A          320 LGYFSWHVGADDNSGLSRAASQAWDAT  346 (356)
T ss_dssp             CEEEEECGGGSSTTHHHHHHHHHHHHC
T ss_pred             CeEEEEeccCCCCchHHHHHHHHhccc
Confidence            999999999999999999998887653
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Back     alignment and structure
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Back     alignment and structure
>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} Back     alignment and structure
>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala} Back     alignment and structure
>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A* Back     alignment and structure
>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* Back     alignment and structure
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5 Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Back     alignment and structure
>2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A* Back     alignment and structure
>1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A* Back     alignment and structure
>1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB: 1om0_A* 1te1_A* Back     alignment and structure
>3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} SCOP: c.1.8.0 PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A* Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A Back     alignment and structure
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A* Back     alignment and structure
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A* Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15 Back     alignment and structure
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A* Back     alignment and structure
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A* Back     alignment and structure
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A* Back     alignment and structure
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 355
d1goia2356 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic 8e-32
d1wb0a1297 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma 2e-26
d2pi6a1292 c.1.8.5 (A:1-239,A:308-361) Signal processing prot 7e-23
d1vf8a1302 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin 1e-21
d1jnda1327 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth f 7e-20
d1nara_289 c.1.8.5 (A:) Seed storage protein {Vicia narbonens 4e-19
d1itxa1347 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu 3e-18
d1w9pa1333 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergil 4e-17
d1edqa2358 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt 5e-17
d1kfwa1374 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitina 1e-15
d1ll7a1330 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus ( 3e-15
d1edta_265 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {St 2e-09
d2ebna_285 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl 7e-08
d1vf8a270 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mo 1e-06
d1ta3a_274 c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I { 0.001
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 356 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase B, catalytic domain
species: Serratia marcescens [TaxId: 615]

 Score =  120 bits (302), Expect = 8e-32
 Identities = 57/333 (17%), Positives = 109/333 (32%), Gaps = 57/333 (17%)

Query: 33  YWHAHSELPIAEIHSAL---FSHLMCAFAFINSSTYNIFINSTSEQFFVIF---TNTVKH 86
              +    P++ I  A     +H+  +F  INS+    +  +T++            +K 
Sbjct: 22  TDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKA 81

Query: 87  RNPSVVTLLSIWG----------GAIFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHG 136
            NPS+  + SI G           A + + +   ++R  F +S V + +  GF G+++  
Sbjct: 82  HNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDW 141

Query: 137 VLPDKGTNITKLGTLFDEWRAESQLLLVMTSHHLPA-------------LESVSYPLDSM 183
               +   +        E R       +                     L      L  +
Sbjct: 142 E-YPQAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQI 200

Query: 184 QRNLDWIHVLNFDYYLPTRDNFTGAHSALYSSSRWFNTNDTVLGLPYHGYAWTLVNPDEN 243
              LD+I+++ +D   P  +  T   +AL+  +    T    L     G++W  +     
Sbjct: 201 VAPLDYINLMTYDLAGP-WEKVTNHQAALFGDA-AGPTFYNALREANLGWSWEELTRAFP 258

Query: 244 PVGSPATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVET 303
              S     A+                        V +   VM         V FD  E+
Sbjct: 259 SPFSLTVDAAV----------------QQHLMMEGVPSAKIVM--------GVPFDDAES 294

Query: 304 IRSKVSFAKEKGLLGYHAFQLSNDD-KWELYSA 335
            + K  + K++ L G   + L  D+   +L +A
Sbjct: 295 FKYKAKYIKQQQLGGVMFWHLGQDNRNGDLLAA 327
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 Back     information, alignment and structure
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 Back     information, alignment and structure
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 327 Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Length = 289 Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 Back     information, alignment and structure
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 333 Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358 Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374 Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Length = 330 Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Length = 265 Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Length = 285 Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 70 Back     information, alignment and structure
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 274 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query355
d1wb0a1297 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 100.0
d2pi6a1292 Signal processing protein (SPC-40, MGP-40) {Sheep 100.0
d1jnda1327 Imaginal disc growth factor-2 {Fruit fly (Drosophi 100.0
d1itxa1347 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 100.0
d1vf8a1302 Chitinase-like lectin ym1, saccharide binding doma 100.0
d1kfwa1374 Psychrophilic chitinase B {Arthrobacter sp., tad20 100.0
d1w9pa1333 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 100.0
d1edqa2358 Chitinase A, catalytic domain {Serratia marcescens 100.0
d1ll7a1330 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 100.0
d1goia2356 Chitinase B, catalytic domain {Serratia marcescens 100.0
d1nara_289 Seed storage protein {Vicia narbonensis, Narbonin 100.0
d2hvma_273 Hevamine A (chitinase/lysozyme) {Para rubber tree 99.96
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 99.96
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.95
d1ta3a_274 Xylanase inhibitor protein I, XIP-I {Wheat (Tritic 99.93
d1cnva_283 Seed storage protein {Jack bean (Canavalia ensifor 99.92
d1eoka_282 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.79
d1vf8a270 Chitinase-like lectin ym1 {Mouse (Mus musculus) [T 99.48
d1wb0a268 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 99.38
d2pi6a268 Signal processing protein (SPC-40, MGP-40) {Sheep 99.33
d1itxa272 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 99.13
d1edqa373 Chitinase A {Serratia marcescens [TaxId: 615]} 99.01
d1kfwa261 Psychrophilic chitinase B {Arthrobacter sp., tad20 98.86
d1jnda292 Imaginal disc growth factor-2 {Fruit fly (Drosophi 98.76
d1w9pa262 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 98.43
d1ll7a262 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 98.41
d1goia388 Chitinase B {Serratia marcescens [TaxId: 615]} 98.23
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 90.77
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 84.96
d1z41a1337 NADPH dehydrogenase NamA {Bacillus subtilis [TaxId 84.48
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 83.11
d1uasa2273 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 82.89
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 82.28
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 80.71
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitotriosidase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-56  Score=409.20  Aligned_cols=269  Identities=24%  Similarity=0.368  Sum_probs=213.5

Q ss_pred             EEEEEecCC-------CCCCccccCCCCccEEEEEEEEEeCCCcEEEeCCCChHHHHHHHHHHHhcCCCcEEEEEEcCCc
Q 041898           29 IRGGYWHAH-------SELPIAEIHSALFSHLMCAFAFINSSTYNIFINSTSEQFFVIFTNTVKHRNPSVVTLLSIWGGA  101 (355)
Q Consensus        29 ~~~~Y~~~~-------~~~~~~~~~~~~~thvi~~f~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~kvllsiGG~~  101 (355)
                      +++|||+.|       ..+.+++++.++||||+|+|+.+++++ .....+.++..++++. .+|+++|++|||+|||||+
T Consensus         2 kvvcYy~~w~~~~~~~~~~~~~~i~~~~~THi~yaf~~~~~~~-~~~~~~~~~~~~~~~~-~lk~~~p~lKvllSiGG~~   79 (297)
T d1wb0a1           2 KLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQ-LSTTEWNDETLYQEFN-GLKKMNPKLKTLLAIGGWN   79 (297)
T ss_dssp             EEEEEEETTGGGSCGGGCCCGGGCCTTTCSEEEEEEEEEETTE-EECSSTTHHHHHHHHH-HGGGTCTTCEEEEEEECTT
T ss_pred             eEEEEECcCcccCCCCCCCChhHCCcccCCEEEEEEEEccCCc-cccCCcccHHHHHHHH-HHHHhCCCCeEEEEEeccc
Confidence            689999984       247899999999999999999998764 3333444556666765 7999999999999999987


Q ss_pred             ----chhhhhcCcHHHHHHHHHHHHHHHcCCCCEEEEEccCCCC----CccHHHHHHHHHHHHc----------cCCcEE
Q 041898          102 ----IFSSMINQSSNRKSFIKSSVEMARFNGFHGLDLHGVLPDK----GTNITKLGTLFDEWRA----------ESQLLL  163 (355)
Q Consensus       102 ----~~~~~~~~~~~r~~fi~~i~~~l~~~~~DGIdiDwE~~~~----~~~~~~~~~~l~~lr~----------~~~~~l  163 (355)
                          .|+.++++++.|++||++++++|++|+|||||||||+|..    +.|+.+|+.|+++||+          .+.+.+
T Consensus        80 ~~~~~fs~~~~~~~~R~~Fi~siv~~l~~y~fDGiDiDWE~p~~~~~~~~d~~n~~~l~~~Lr~~l~~~~~~~~~~~~~~  159 (297)
T d1wb0a1          80 FGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLL  159 (297)
T ss_dssp             TCSHHHHHHHTSHHHHHHHHHHHHHHHHHTTCCEEEEECSCTTSTTCCTTHHHHHHHHHHHHHHHHHHHHHHHCSCCCEE
T ss_pred             cccchHHHHhhhhHHHHHHHHHHHHHHHHcCCCceeEEEEeccccCCChHHHHHHHHHHHHHHHHHhhhhhhcCCCceeE
Confidence                6999999999999999999999999999999999999964    4789999999999998          356899


Q ss_pred             EEEeccCCcccccCCChhhhhccCcEEEEeeccCcCCCCCCCCCCCCCCCCcccccccCceEEeceeeeeeeEecCCCCC
Q 041898          164 VMTSHHLPALESVSYPLDSMQRNLDWIHVLNFDYYLPTRDNFTGAHSALYSSSRWFNTNDTVLGLPYHGYAWTLVNPDEN  243 (355)
Q Consensus       164 s~a~~~~~~~~~~~yd~~~l~~~vD~v~vm~YD~~~~~~~~~~g~~apl~~~~~~~~~~KlvlGlp~yG~~~~~~~~~~~  243 (355)
                      ++++|+.+......|+++++.+++|+||||+||++++| +..+++++||+....                          
T Consensus       160 s~~~~~~~~~~~~~~~~~~i~~~vD~invmtYD~~g~~-~~~tg~~aply~~~~--------------------------  212 (297)
T d1wb0a1         160 SAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSW-EKVTGHNSPLYKRQE--------------------------  212 (297)
T ss_dssp             EEEECCCHHHHHHHCCHHHHHHHCSEEEECCCCSSCTT-SSBCCCSSCSSCCTT--------------------------
T ss_pred             EEEccCchhHhhhccCHHHHHhhCCEEEEEecccCCCC-CCCCCCCCcCCCCcc--------------------------
Confidence            99999887666667999999999999999999999997 678999999984210                          


Q ss_pred             CCCCCccCCCCCCCCccchHHHHHhhhcCCCceeEEEecCceeeEEEeCCEEEEeCCHHHHHHHHHHHHHcCCCEEEEEe
Q 041898          244 PVGSPATGPAITIDGSVGFKFIKGFIRDYGYGAASVYNHSYVMNFFSAKTTWVNFDGVETIRSKVSFAKEKGLLGYHAFQ  323 (355)
Q Consensus       244 ~~~~p~~~~~~~~~g~~~y~ei~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~v~ydd~~S~~~K~~~~~~~gl~Gv~iW~  323 (355)
                         .+  +.    ....+-....+.....|  ..     .++-      --+|.|||++|++.|++|++++||||+|+|+
T Consensus       213 ---~~--~~----~~~~~~d~~v~~~~~~G--~p-----~~Kl------vlGipyd~~~si~~K~~~~~~~glgGv~~W~  270 (297)
T d1wb0a1         213 ---ES--GA----AASLNVDAAVQQWLQKG--TP-----ASKL------ILGMPTDDVESFKTKVSYLKQKGLGGAMVWA  270 (297)
T ss_dssp             ---CC--GG----GGGCSHHHHHHHHHHTT--CC-----GGGE------EEEEESCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             ---cc--CC----CCCCCHHHHHHHHHHcC--CC-----HHHe------EEEeccCCHHHHHHHHHHHHhcCCceEEEEe
Confidence               00  00    00011111122111122  00     0000      0134489999999999999999999999999


Q ss_pred             cCCCCCcch-hhhccccccccccccc
Q 041898          324 LSNDDKWEL-YSAEKQPADVGNYREI  348 (355)
Q Consensus       324 l~~Dd~~~l-~~~~~~~l~~~~~~~~  348 (355)
                      +++||+.+. |+...+||++++.++|
T Consensus       271 l~~DD~~G~~cg~~~~pLl~ai~~~l  296 (297)
T d1wb0a1         271 LDLDDFAGFSCNQGRYPLIQTLRQEL  296 (297)
T ss_dssp             GGGSCTTCSSSSSCSSHHHHHHHHHC
T ss_pred             CccccCCCCcCCCCCccHHHHHHHHh
Confidence            999999995 9999999999999876
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Back     information, alignment and structure
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1w9pa2 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1ll7a2 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1goia3 d.26.3.1 (A:292-379) Chitinase B {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure