Citrus Sinensis ID: 042005
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 432 | 2.2.26 [Sep-21-2011] | |||||||
| Q0WRX3 | 502 | Serine carboxypeptidase-l | yes | no | 0.833 | 0.717 | 0.451 | 1e-97 | |
| P52711 | 516 | Serine carboxypeptidase I | N/A | no | 0.831 | 0.695 | 0.463 | 7e-97 | |
| Q9M099 | 465 | Serine carboxypeptidase 2 | no | no | 0.831 | 0.772 | 0.425 | 5e-91 | |
| O82229 | 454 | Putative serine carboxype | no | no | 0.831 | 0.790 | 0.425 | 1e-88 | |
| Q8S8K6 | 462 | Serine carboxypeptidase-l | no | no | 0.821 | 0.768 | 0.433 | 2e-88 | |
| Q949Q7 | 479 | Serine carboxypeptidase-l | no | no | 0.828 | 0.747 | 0.405 | 2e-88 | |
| Q9ZQQ0 | 452 | Serine carboxypeptidase-l | no | no | 0.824 | 0.787 | 0.406 | 1e-87 | |
| P08819 | 444 | Serine carboxypeptidase 2 | N/A | no | 0.817 | 0.795 | 0.407 | 4e-87 | |
| Q9SFB5 | 459 | Serine carboxypeptidase-l | no | no | 0.828 | 0.779 | 0.404 | 7e-87 | |
| Q1PF08 | 464 | Serine carboxypeptidase-l | no | no | 0.819 | 0.762 | 0.406 | 4e-86 |
| >sp|Q0WRX3|SCP40_ARATH Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 357 bits (916), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/430 (45%), Positives = 257/430 (59%), Gaps = 70/430 (16%)
Query: 66 QDGLKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLN 125
Q+GL+ +D I LPGQP V+FDQY GYV V+ GRS FYYFVE+ ++ S PL+LWLN
Sbjct: 73 QEGLRKRDLIRRLPGQP-PVSFDQYGGYVTVNESAGRSFFYYFVEASKSKDSSPLLLWLN 131
Query: 126 GGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWN----------------------KD 163
GGPG SS G + ELGPFRV+ DGKTL++N YAWN D
Sbjct: 132 GGPGCSSLAYGALQELGPFRVHSDGKTLFRNRYAWNNAANVLFLESPAGVGFSYTNTTSD 191
Query: 164 YKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQ 223
+ +GD TA D+Y FLV+WL RFPEYK RD +IAGESYAGHY+PQLA IL + ++
Sbjct: 192 LEKHGDRNTAADNYIFLVNWLERFPEYKGRDLYIAGESYAGHYVPQLAHTILLH----HR 247
Query: 224 TIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSS--DKVC 281
+ NL+GI +GNA+I+ ET + G DF+ +HAL+ ++ L S+ + + ++S + C
Sbjct: 248 SFFNLKGILIGNAVINDETDLMGMYDFFESHALISEDSLARLKSNCDLKTESASVMTEEC 307
Query: 282 LEFIDQGDAAAGNIYSYDIYAPLCNSSS-----KFNTEIA--------------NSGEIN 322
DQ D + Y+IYAPLC +S+ K T I N E+
Sbjct: 308 AVVSDQIDMDTYYLDIYNIYAPLCLNSTLTRRPKRGTTIREFDPCSDHYVQAYLNRPEVQ 367
Query: 323 ---------------------RNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTC 361
+ W D P TV+P+I+ELM +G+R+WV+SGDTDG +PVT
Sbjct: 368 AALHANATKLPYEWQPCSSVIKKWNDSPTTVIPLIKELMGQGVRVWVFSGDTDGRIPVTS 427
Query: 362 TRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQ-NLTFVTVRGAGHFVPSYQPARALVLF 420
T+Y++KK+ +TAW+PWY GEVGGY Y+ LTF TVRGAGH VPS+QP R+L LF
Sbjct: 428 TKYSLKKMNLTAKTAWHPWYLGGEVGGYTEEYKGKLTFATVRGAGHQVPSFQPKRSLSLF 487
Query: 421 SSFINGTLPP 430
F+N T P
Sbjct: 488 IHFLNDTPLP 497
|
Probable carboxypeptidase. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 1EC: 6EC: .EC: - |
| >sp|P52711|CBP23_HORVU Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 354 bits (909), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 201/434 (46%), Positives = 253/434 (58%), Gaps = 75/434 (17%)
Query: 68 GLKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVES--PQNSSSKPLVLWLN 125
G K+ D++E+LPG P GV+F QY+GYV VD+ GR+LFYY E+ +KPL+LWLN
Sbjct: 79 GRKEADRVEALPGHPRGVDFAQYAGYVTVDAAAGRALFYYLAEAVGGNGDKTKPLLLWLN 138
Query: 126 GGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK----------------------D 163
GGPG SS G G M ELGPFRV DGKTLY N Y+WN D
Sbjct: 139 GGPGCSSLGYGAMEELGPFRVMSDGKTLYSNPYSWNHAANVLFLESPAGVGYSYSNTTAD 198
Query: 164 YKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQ 223
Y +GD TA D+Y FL +WL RFPEYK R+F+I GESYAGHY+PQLA AIL +HA+
Sbjct: 199 YGRSGDNGTAEDAYQFLDNWLERFPEYKGREFYITGESYAGHYVPQLAHAIL---RHASP 255
Query: 224 TIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLN---SSDKV 280
INL+GI +GNA+I+ T KG DF+WTHAL+ DE G++ + NF + +S+ +
Sbjct: 256 D-INLKGIMIGNAVINDWTDSKGMYDFFWTHALISDETADGISKNCNFTAYGAGVASNAL 314
Query: 281 CLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGE-------------INR---- 323
C D+ + +I Y+IYAP C S IA S + +NR
Sbjct: 315 CDAASDEVGESLADIDIYNIYAPNCQSEKLVTPPIAPSIDNFDPCTDYYVEAYLNRPDVQ 374
Query: 324 ----------------------NWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTC 361
W D +TVLPIIQELM IR+WVYSGDTDG +PVT
Sbjct: 375 KALHANVTRLDHPWSACSDVLTRWVDSAKTVLPIIQELMKNSIRVWVYSGDTDGRVPVTS 434
Query: 362 TRYAVKKLGTPVRTAWYPWYTQ----GEVGGYAVGYQ-NLTFVTVRGAGHFVPSYQPARA 416
+R +V +L PV W PW++ GEVGGY V Y+ +L+ VTVRGAGH VPSYQP RA
Sbjct: 435 SRLSVNQLQLPVAAKWRPWFSSTKGAGEVGGYIVQYKGDLSLVTVRGAGHEVPSYQPRRA 494
Query: 417 LVLFSSFINGTLPP 430
LVL +F+ G P
Sbjct: 495 LVLVQNFLAGKALP 508
|
Hordeum vulgare (taxid: 4513) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 6 EC: . EC: 6 |
| >sp|Q9M099|SCP24_ARATH Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 335 bits (858), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 186/437 (42%), Positives = 248/437 (56%), Gaps = 78/437 (17%)
Query: 70 KDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNS-SSKPLVLWLNGGP 128
++KD+I++LPGQP V F QYSGYVNV+ GR+LFY+ ES S +KPL+LWLNGGP
Sbjct: 28 QEKDRIKALPGQP-KVAFSQYSGYVNVNQSHGRALFYWLTESSSPSPHTKPLLLWLNGGP 86
Query: 129 GFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNKD----------------------YKV 166
G SS G E+GPFR+NK G LY N++AWNKD K
Sbjct: 87 GCSSIAYGASEEIGPFRINKTGSNLYLNKFAWNKDANLLFLESPAGVGYSYTNTSSDLKD 146
Query: 167 NGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTII 226
+GD RTA+D+ FL+ WL+RFP+YK RDF+IAGESYAGHY+PQLA+ I N+ ++ II
Sbjct: 147 SGDERTAQDNLIFLIKWLSRFPQYKYRDFYIAGESYAGHYVPQLAKKINDYNKAFSKPII 206
Query: 227 NLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFID 286
NL+G +GNA+ D + GTV ++WTHA++ D+ Y + NF SD C ++
Sbjct: 207 NLKGFLVGNAVTDNQYDSIGTVTYWWTHAIISDKSYKSILKYCNFTVERVSDD-CDNAVN 265
Query: 287 QG-DAAAGNIYSYDIYAPLCNSS-SKFNTE------------------------------ 314
+ G+I Y IY P C ++ K NT
Sbjct: 266 YAMNHEFGDIDQYSIYTPTCVAAQQKKNTTGFFVRMKNTLLRRRLVSGYDPCTESYAEKY 325
Query: 315 ---------------------IANSGEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDT 353
A S + + WKD +T+LPI +EL A G+RIW++SGDT
Sbjct: 326 FNRPDVQRAMHANVTGIRYKWTACSDVLIKTWKDSDKTMLPIYKELAASGLRIWIFSGDT 385
Query: 354 DGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP 413
D +PVT TR+++ L PV+T WYPWYT +VGG+ Y+ LTF TVRGAGH VP ++P
Sbjct: 386 DSVVPVTATRFSLSHLNLPVKTRWYPWYTDNQVGGWTEVYKGLTFATVRGAGHEVPLFEP 445
Query: 414 ARALVLFSSFINGTLPP 430
RAL+LF SF+ G P
Sbjct: 446 KRALILFRSFLAGKELP 462
|
Active serine carboxypeptidase with broad substrate preference, including basic and hydrophilic groups. Processes a protein involved in an early event in the brassinosteroid signaling pathway. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 6 EC: . EC: 6 |
| >sp|O82229|SCP23_ARATH Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 327 bits (837), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/428 (42%), Positives = 241/428 (56%), Gaps = 69/428 (16%)
Query: 70 KDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPG 129
+++D I++LPGQP V F Q+SGYV V+ GRSLFY+ ESP +S +KPL+LWLNGGPG
Sbjct: 26 QEEDMIKALPGQP-QVGFSQFSGYVTVNESHGRSLFYWLTESPSSSHTKPLLLWLNGGPG 84
Query: 130 FSSFGAGTMMELGPFRVNKDGKTLYQNEYAWN----------------------KDYKVN 167
SS G G E+GPFR+NK G LY N++ WN D K +
Sbjct: 85 CSSIGYGASEEIGPFRINKTGSNLYLNKFTWNTEANILFLESPAGVGFSYTNTSSDLKDS 144
Query: 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAI-LYNNQHANQTII 226
GD RTA+++ FL+ W++RFP+Y+ RDF+I GESYAGHY+PQLA+ I LYN N II
Sbjct: 145 GDERTAQENLIFLIKWMSRFPQYQYRDFYIVGESYAGHYVPQLAKKIHLYNKAFNNTPII 204
Query: 227 NLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFID 286
NL+G +GN +D G + W+HA++ D+ Y + +F + +SDK C +
Sbjct: 205 NLKGFMVGNGDMDKHYDRLGAAMYAWSHAMISDKTYKSILKHCSFTADKTSDK-CNWALY 263
Query: 287 QGDAAAGNIYSYDIYAPLC---NSSSKF------------------NTEI---------- 315
G + Y IY+P C + +KF EI
Sbjct: 264 FAYREFGKVNGYSIYSPSCVHQTNQTKFLHGRLLVEEYEYDPCTESYAEIYYNRPDVQRA 323
Query: 316 --ANSGEI-----------NRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCT 362
AN I N NWKD ++LPI +EL A G+RIWV+SGDTD +PVT T
Sbjct: 324 MHANLTSIPYKWTLCNMVVNNNWKDSEFSMLPIYKELTAAGLRIWVFSGDTDAVVPVTGT 383
Query: 363 RYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422
R A+ KL PV+T WYPWY++ +VGG+ Y+ LTF T+RGAGH VP QP RAL L S
Sbjct: 384 RLALSKLNLPVKTPWYPWYSEKQVGGWTEVYEGLTFATIRGAGHEVPVLQPERALTLLRS 443
Query: 423 FINGTLPP 430
F+ G P
Sbjct: 444 FLAGKELP 451
|
Probable carboxypeptidase. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 6 EC: . EC: - |
| >sp|Q8S8K6|SCP28_ARATH Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 326 bits (836), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/431 (43%), Positives = 239/431 (55%), Gaps = 76/431 (17%)
Query: 70 KDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPG 129
K KDKI SLPGQP +NF Q+SGYV VD GR+LFY+ E+P+ S +KPLVLWLNGGPG
Sbjct: 33 KMKDKIISLPGQPPNLNFSQFSGYVTVDPAAGRALFYWLTEAPRPSGTKPLVLWLNGGPG 92
Query: 130 FSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK----------------------DYKVN 167
SS G E+GPFRVN DGKTL N YAWNK D
Sbjct: 93 CSSIAYGASEEVGPFRVNPDGKTLRLNLYAWNKVANVLFLDSPAGVGFSYTNTSSDELTV 152
Query: 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIIN 227
GD RT D+Y FLV WL RFPEYK R F+IAGESYAGHYIP+LAQ I+ N+ A IN
Sbjct: 153 GDKRTGEDAYRFLVRWLERFPEYKERAFYIAGESYAGHYIPELAQLIVNRNKGAKNPTIN 212
Query: 228 LRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTS-----SYNFASLNSSDKVCL 282
L+GI MGN L+D KG D++W H L+ DE Y+ LT S F LN C
Sbjct: 213 LKGILMGNPLVDDYNDNKGMRDYWWNHGLISDESYNDLTKWCLNDSILFPKLN-----CN 267
Query: 283 EFIDQGDAAAGNIYSYDIYAPLC---------------------------------NSSS 309
++Q + G+I Y+I +P C N
Sbjct: 268 AALNQALSEFGDIDPYNINSPACTTHASSNEWMQAWRYRGNDECVVGYTRKYMNDPNVHK 327
Query: 310 KFNTEIANSGE-------INRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCT 362
F+ + S I +NWKD P+++LPII+ L+ +RIW++SGD+D LP++ T
Sbjct: 328 SFHARLNGSTPWTPCSRVIRKNWKDSPKSMLPIIKNLLQAHLRIWIFSGDSDAVLPLSGT 387
Query: 363 RYAVKKLGTPVRTAWYPWY-TQGEVGGYAVGYQN--LTFVTVRGAGHFVPSYQPARALVL 419
R+++ + WYPWY + G VGG++ Y++ LT+ TVR AGH VP QP AL L
Sbjct: 388 RHSINAMKLKSSKRWYPWYHSHGLVGGWSQVYEDGLLTYTTVRAAGHEVPLSQPRLALFL 447
Query: 420 FSSFI-NGTLP 429
F+ F+ N +LP
Sbjct: 448 FTHFLANHSLP 458
|
Probable carboxypeptidase. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 6 EC: . EC: - |
| >sp|Q949Q7|SCP29_ARATH Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 326 bits (836), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/427 (40%), Positives = 235/427 (55%), Gaps = 69/427 (16%)
Query: 70 KDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPG 129
K++DK+ LPGQ V+F YSG+V + Q GR+LFY+ E+ +++ SKPLVLWLNGGPG
Sbjct: 33 KEQDKVSKLPGQNFNVSFAHYSGFVATNEQLGRALFYWLFEAVEDAKSKPLVLWLNGGPG 92
Query: 130 FSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK----------------------DYKVN 167
SS G E+GPF + DGKTLY N+Y+WN+ D K N
Sbjct: 93 CSSVAYGEAEEIGPFHIKADGKTLYLNQYSWNQAANILFLDAPVGVGYSYSNTSSDLKSN 152
Query: 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIIN 227
GD RTA DS FL+ W+ RFPEYK RDF+I GESYAGHYIPQL++AI+ +NQ +++ IN
Sbjct: 153 GDKRTAEDSLKFLLKWVERFPEYKGRDFYIVGESYAGHYIPQLSEAIVKHNQGSDKNSIN 212
Query: 228 LRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQ 287
L+G +GN L+D G + W+ + D+ Y L F S S K C + ++
Sbjct: 213 LKGYMVGNGLMDDFHDRLGLFQYIWSLGFISDQTYSLLQLQCGFESFIHSSKQCNKILEI 272
Query: 288 GDAAAGNIYSYDIYAPLCNSSS-------------------------KFNTEIANSGEIN 322
D GNI Y ++ P C +++ K T N E+
Sbjct: 273 ADKEIGNIDQYSVFTPACVANASQSNMLLKKRPMTSRVSEQYDPCTEKHTTVYFNLPEVQ 332
Query: 323 R----------------------NWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVT 360
+ +W D P +VL I EL+A G+RIWV+SGD D +PVT
Sbjct: 333 KALHVPPGLAPSKWDTCSDVVSEHWNDSPSSVLNIYHELIAAGLRIWVFSGDADAVVPVT 392
Query: 361 CTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420
TRY++ L +A+ PWY G+VGG++ Y L FVTVRGAGH VP ++P +AL LF
Sbjct: 393 STRYSIDALNLRPLSAYGPWYLDGQVGGWSQQYAGLNFVTVRGAGHEVPLHRPKQALALF 452
Query: 421 SSFINGT 427
+FI+GT
Sbjct: 453 KAFISGT 459
|
Probable carboxypeptidase. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 6 EC: . EC: - |
| >sp|Q9ZQQ0|SCP26_ARATH Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 323 bits (828), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/431 (40%), Positives = 235/431 (54%), Gaps = 75/431 (17%)
Query: 70 KDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESP--QNSSSKPLVLWLNGG 127
++KD+I LPG+P V+F +SGY+ V+ GR+LFY+ ESP +N SKPLVLWLNGG
Sbjct: 25 QEKDRIFHLPGEPNDVSFSHFSGYITVNESAGRALFYWLTESPPSENPESKPLVLWLNGG 84
Query: 128 PGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK----------------------DYK 165
PG SS G E+GPFR+N DGKTLY N Y+WNK D
Sbjct: 85 PGCSSVAYGAAEEIGPFRINPDGKTLYHNPYSWNKLANLLFLESPAGVGFSYSNTTSDLY 144
Query: 166 VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTI 225
GD RTA D+Y FLV W RFP+YK R+F+IAGESYAGHY+PQL+Q I+Y ++
Sbjct: 145 TAGDQRTAEDAYVFLVKWFERFPQYKHREFYIAGESYAGHYVPQLSQ-IVYEKRNP---A 200
Query: 226 INLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFI 285
IN +G +GNA+ID G +++W H L+ D YH L + F S C + +
Sbjct: 201 INFKGFIVGNAVIDDYHDYVGLFEYWWAHGLISDLTYHNLRITCEFGSSEHPSSKCTKAM 260
Query: 286 DQGDAAAGNIYSYDIYAPLCNS------------------------SSKFNTEIANSGEI 321
+ D GNI Y IY C + K++ NS E+
Sbjct: 261 EAADLEQGNIDPYSIYTVTCKKEAAALRSRFSRVRHPWMWRAYDPCTEKYSGMYFNSPEV 320
Query: 322 NR----------------------NWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPV 359
+ W D P ++LPI +EL+A G+RIWV+SGDTD +P+
Sbjct: 321 QKAMHANITGLAYPWKGCSDIVGEKWADSPLSMLPIYKELIAAGLRIWVFSGDTDSVVPI 380
Query: 360 TCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVL 419
T TRY+++ L + WYPW G+VGG++ Y+ LT VT+ GAGH VP ++P RA +L
Sbjct: 381 TGTRYSIRALKLQPLSKWYPWNDDGQVGGWSQVYKGLTLVTIHGAGHEVPLFRPRRAFLL 440
Query: 420 FSSFI-NGTLP 429
F SF+ N LP
Sbjct: 441 FQSFLDNKPLP 451
|
Probable carboxypeptidase. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 6 EC: . EC: - |
| >sp|P08819|CBP2_WHEAT Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 322 bits (824), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 177/434 (40%), Positives = 227/434 (52%), Gaps = 81/434 (18%)
Query: 73 DKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSS 132
D+I LPGQP V+FD YSGY+ VD GRSLFY E+P+++ PLVLWLNGGPG SS
Sbjct: 9 DRIARLPGQP-AVDFDMYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSS 67
Query: 133 FGAGTMMELGPFRVNKDGKTLYQNEYAWNK----------------------DYKVNGDI 170
G ELG FRV G L NEY WNK D +GD
Sbjct: 68 VAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDN 127
Query: 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRG 230
RTA DSY FL W RFP YK RDF+IAGESYAGHY+P+L+Q + + +INL+G
Sbjct: 128 RTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLV----HRSKNPVINLKG 183
Query: 231 IAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDA 290
+GN LID GT +F+W H ++ D+ Y L + S C D A
Sbjct: 184 FMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAATDVATA 243
Query: 291 AAGNIYSYDIYAPLCN-------------------------------SSSKFNTEIAN-- 317
GNI Y +Y P+CN + +++T N
Sbjct: 244 EQGNIDMYSLYTPVCNITSSSSSSSSSLSQQRRSRGRYPWLTGSYDPCTERYSTAYYNRR 303
Query: 318 ---------------------SGEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGA 356
S IN +W D P+++LPI +EL+A G+RIWV+SGDTD
Sbjct: 304 DVQMALHANVTGAMNYTWATCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAV 363
Query: 357 LPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARA 416
+P+T TRY++ LG P T+WYPWY EVGG++ Y+ LT V+VRGAGH VP ++P +A
Sbjct: 364 VPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQA 423
Query: 417 LVLFSSFINGTLPP 430
LVLF F+ G P
Sbjct: 424 LVLFQYFLQGKPMP 437
|
Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 6 EC: . EC: 6 |
| >sp|Q9SFB5|SCP27_ARATH Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 321 bits (822), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 173/428 (40%), Positives = 236/428 (55%), Gaps = 70/428 (16%)
Query: 72 KDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESP--QNSSSKPLVLWLNGGPG 129
+D+I +LPGQP V+F QYSGYV V + GR+LFY+ VESP ++ S+PLVLWLNGGPG
Sbjct: 31 RDRISNLPGQPSNVDFRQYSGYVTVHEERGRALFYWLVESPLARDPKSRPLVLWLNGGPG 90
Query: 130 FSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK----------------------DYKVN 167
SS G E+GPFRV DGKTL+ YAWNK D
Sbjct: 91 CSSVAYGAAEEIGPFRVGSDGKTLHSKLYAWNKLANLLFLESPAGVGFSYSNTTSDLYTT 150
Query: 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIIN 227
GD RTA DSY FLV+W RFP+YK R+F+I GESYAGH++PQL++ + N+ IN
Sbjct: 151 GDQRTAEDSYIFLVNWFERFPQYKHREFYIVGESYAGHFVPQLSKLVHERNKGFKNPAIN 210
Query: 228 LRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGL-TSSYNFASLNSSDKVCLEFID 286
L+G +GNA+ D GT +++W H L+ D YH L T+ Y+ +S + S + C+ +
Sbjct: 211 LKGFMVGNAVTDDYHDYIGTFEYWWNHGLISDSTYHQLKTACYSVSSQHPSMQ-CMVALR 269
Query: 287 QGDAAAGNIYSYDIYAPLCNSS------------------------------SKFNTEIA 316
+ GNI Y I+ CNS+ ++ + + A
Sbjct: 270 NAELEQGNIDPYSIFTKPCNSTVALKRFLKGRYPWMSRAYDPCTERYSNVYFNRLDVQKA 329
Query: 317 NSGEINR--------------NWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCT 362
+ R W D P ++LPI +EL+ G++IWV+SGDTD +P+T T
Sbjct: 330 LHANVTRLSYPWKACSDIVGSYWDDSPLSMLPIYKELITAGLKIWVFSGDTDAVVPITAT 389
Query: 363 RYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422
RY+V L T WYPWY G+VGG++ Y+ LT VTV GAGH VP ++P +A +LF S
Sbjct: 390 RYSVDALKLATITNWYPWYDHGKVGGWSQVYKGLTLVTVAGAGHEVPLHRPRQAFILFRS 449
Query: 423 FINGTLPP 430
F+ P
Sbjct: 450 FLESKPMP 457
|
Probable carboxypeptidase. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 6 EC: . EC: - |
| >sp|Q1PF08|SCP22_ARATH Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 318 bits (816), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/435 (40%), Positives = 245/435 (56%), Gaps = 81/435 (18%)
Query: 70 KDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNS-SSKPLVLWLNGGP 128
+++D+I++LPGQP V F Q+SGYV V+ GRSLFY+ ES +S +KPL+LWLNGGP
Sbjct: 26 QEEDRIKALPGQP-KVGFSQFSGYVTVNESHGRSLFYWLTESSSHSPHTKPLLLWLNGGP 84
Query: 129 GFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWN----------------------KDYKV 166
G SS G E+GPFR++K G LY N ++WN D++
Sbjct: 85 GCSSIAYGASEEIGPFRISKTGCNLYLNNFSWNTEANLLFLESPVGVGFSYTNTSSDFEE 144
Query: 167 NGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAIL-YNNQHANQTI 225
+GD RTA+++ FL+SW++RFP+Y+ RDF+I GESYAGHY+PQLAQ I YNN + N +
Sbjct: 145 SGDERTAQENLIFLISWMSRFPQYRYRDFYIVGESYAGHYVPQLAQKIHEYNNAYKN-PV 203
Query: 226 INLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFI 285
INL+G +GN +D GT+ ++W+HA++ D Y+ + + +F + + K C I
Sbjct: 204 INLKGFMVGNPEMDKNNDRLGTITYWWSHAMISDASYNRILKNCDFTA-DRFSKECDSAI 262
Query: 286 DQGDAAAGNIYSYDIYAPLC------NSSSKFNTEIA----------------------- 316
A G+I Y IY P C + +KF +
Sbjct: 263 YVAAADFGDIDQYSIYTPKCVPPQDQTNQTKFEQMMQMHTTKRFLEDQYDPCTENYAEIY 322
Query: 317 -NSGEINR------------------------NWKDKPQTVLPIIQELMAEGIRIWVYSG 351
N E+ R NW+D ++LPI +EL+A G+RIWVYSG
Sbjct: 323 YNRPEVQRAMHANHTAIPYKWTACSDSVFNNWNWRDSDNSMLPIYKELIAAGLRIWVYSG 382
Query: 352 DTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSY 411
DTD +PVT TRY++ KL V+T WYPWY+ +VGG Y+ LTFVTVRGAGH VP +
Sbjct: 383 DTDSVIPVTATRYSLGKLNLRVKTRWYPWYSGNQVGGRTEVYEGLTFVTVRGAGHEVPFF 442
Query: 412 QPARALVLFSSFING 426
QP AL+L SF+ G
Sbjct: 443 QPQSALILLRSFLAG 457
|
Probable carboxypeptidase. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 6 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 432 | ||||||
| 359492624 | 488 | PREDICTED: serine carboxypeptidase-like | 0.972 | 0.860 | 0.560 | 1e-140 | |
| 225428737 | 488 | PREDICTED: serine carboxypeptidase II-3- | 0.976 | 0.864 | 0.536 | 1e-139 | |
| 297741315 | 477 | unnamed protein product [Vitis vinifera] | 0.909 | 0.823 | 0.549 | 1e-136 | |
| 147811059 | 488 | hypothetical protein VITISV_017087 [Viti | 0.976 | 0.864 | 0.532 | 1e-133 | |
| 225458529 | 488 | PREDICTED: serine carboxypeptidase II-3- | 0.863 | 0.764 | 0.537 | 1e-125 | |
| 302142365 | 1017 | unnamed protein product [Vitis vinifera] | 0.863 | 0.366 | 0.537 | 1e-125 | |
| 357443925 | 497 | Serine carboxypeptidase-like protein [Me | 0.854 | 0.742 | 0.519 | 1e-120 | |
| 356547861 | 433 | PREDICTED: serine carboxypeptidase II-3- | 0.858 | 0.856 | 0.519 | 1e-120 | |
| 357462111 | 497 | Serine carboxypeptidase-like protein [Me | 0.854 | 0.742 | 0.517 | 1e-119 | |
| 356552178 | 495 | PREDICTED: serine carboxypeptidase II-3- | 0.925 | 0.808 | 0.476 | 1e-115 |
| >gi|359492624|ref|XP_002282319.2| PREDICTED: serine carboxypeptidase-like 40-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 276/492 (56%), Positives = 322/492 (65%), Gaps = 72/492 (14%)
Query: 1 MANSAFIIWISLLCLSNW-KCYGWIDMNPL-KFIKEELSKER--DNYALTSYSSDIYAVA 56
MAN A IW SL CL +C G NP+ K I+E LSK R D + TS+ + +
Sbjct: 1 MANIALNIWFSLCCLVGLVQCCGGRGFNPIGKLIREGLSKGRLSDEWTWTSFPLNTTS-- 58
Query: 57 GHSALLNSPQDGLKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSS 116
P DGLK+ KIESLPGQP GV+FDQ+SGYV VDS GR+LFYYFVESPQNS+
Sbjct: 59 ------KFPLDGLKESHKIESLPGQPNGVDFDQFSGYVTVDSLAGRALFYYFVESPQNST 112
Query: 117 SKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK-------------- 162
+KPLVLWLNGGPG SSFG G MMELGPFRVNKDG+TLY N++AWNK
Sbjct: 113 TKPLVLWLNGGPGCSSFGIGAMMELGPFRVNKDGETLYLNKHAWNKEANIIFLESPAGVG 172
Query: 163 --------DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAI 214
DY +GD RTA DSY FL+SWL FPEYKTRDFFIAGE YAGHY+PQLAQ I
Sbjct: 173 FSYSDTASDYNSSGDYRTASDSYIFLLSWLEIFPEYKTRDFFIAGEGYAGHYVPQLAQTI 232
Query: 215 LYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASL 274
L N + IINLRGIAMGN +D ET KG VD+YW+HAL+ DEIY L + N +S
Sbjct: 233 LLFNSIPDLPIINLRGIAMGNPYVDRETAFKGIVDYYWSHALISDEIYMELILNCNVSSE 292
Query: 275 NSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFN---------------------- 312
S+ + C+ ++ Q D A GNI YDIYAPLCNSS+ N
Sbjct: 293 ESASEECIAWLLQADNAMGNINVYDIYAPLCNSSADSNSVSGLISAFDPCSGNYIHAYLN 352
Query: 313 ------------TEIANSGEINRN----WKDKPQTVLPIIQELMAEGIRIWVYSGDTDGA 356
T + E R+ WKD P T+LP IQELM+ GI++W+YSGDTDG
Sbjct: 353 IPQVQEALHANVTGLPCPWEFCRHIFGMWKDSPATMLPSIQELMSSGIQVWIYSGDTDGV 412
Query: 357 LPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARA 416
+PVT +RY +KKLGT VRT W+PWYT GEVGGYAV YQNLTFVTVRG+GHFVPSYQPAR+
Sbjct: 413 VPVTSSRYFIKKLGTLVRTPWHPWYTHGEVGGYAVEYQNLTFVTVRGSGHFVPSYQPARS 472
Query: 417 LVLFSSFINGTL 428
L LF SF+NGTL
Sbjct: 473 LQLFCSFLNGTL 484
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225428737|ref|XP_002281988.1| PREDICTED: serine carboxypeptidase II-3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/490 (53%), Positives = 326/490 (66%), Gaps = 68/490 (13%)
Query: 1 MANSAFIIWISLLCLSNW-KCYGWIDMNPL-KFIKEELSKER-DNYALTSYSSDIYAVAG 57
M + F+I ISL CL +C+G + L K ++ + SK + + +++ S S++
Sbjct: 1 MKAAFFLILISLTCLVALVQCHGGSRYDLLGKLMQAQRSKRQSEGHSIESMSTE------ 54
Query: 58 HSALLNSPQDGLKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSS 117
+S + QDGLKD D+I++LPGQP G+N DQYSGYV VD Q GR+LFYYFVES QNSSS
Sbjct: 55 YSPVYMGSQDGLKDGDRIQALPGQPNGLNLDQYSGYVTVDPQAGRALFYYFVES-QNSSS 113
Query: 118 KPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWN---------------- 161
KPLVLWLNGGPG SS G+G MMELGPFRVN DG TL NEYAW+
Sbjct: 114 KPLVLWLNGGPGCSSLGSGAMMELGPFRVNGDGNTLSYNEYAWSNVANILFLESPAGVGF 173
Query: 162 ------KDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAIL 215
DY +GD +TA D+YTFL++WL RFPEYKTRDFFI GESYAGHY+PQL+Q IL
Sbjct: 174 SYSNTTSDYDKSGDKQTAEDNYTFLLNWLERFPEYKTRDFFITGESYAGHYVPQLSQKIL 233
Query: 216 YNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLN 275
NN+ NQT+INL+GIA+GNA ID ET +KG DF+WTH+L+ DEI G+ + NF+S
Sbjct: 234 QNNKITNQTVINLKGIAIGNAWIDYETGLKGMYDFFWTHSLISDEINEGINLNCNFSSET 293
Query: 276 SSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIA--------------NSGEI 321
+ VC +++D DAA G IY YDIYAPLC+SSS I+ N E+
Sbjct: 294 TISDVCEQYLDAADAAVGYIYIYDIYAPLCSSSSNSTRPISVFDPCSEDYIQTYLNIPEV 353
Query: 322 NRN----------------------WKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPV 359
++ WKD P TVLP+I+ELM GI +W+YSGDTDG +P
Sbjct: 354 QKSMHANVTNIPGPWESCNDAIFYGWKDMPLTVLPVIEELMVSGISVWIYSGDTDGRVPT 413
Query: 360 TCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVL 419
T TRY++ LGT V+T WYPWYTQGEVGGYAVGY+NL+FVT+RGAGHFVPSYQP RAL
Sbjct: 414 TSTRYSINNLGTSVKTPWYPWYTQGEVGGYAVGYKNLSFVTIRGAGHFVPSYQPTRALAF 473
Query: 420 FSSFINGTLP 429
FSSF+ G LP
Sbjct: 474 FSSFLAGKLP 483
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297741315|emb|CBI32446.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/459 (54%), Positives = 310/459 (67%), Gaps = 66/459 (14%)
Query: 30 KFIKEELSKER-DNYALTSYSSDIYAVAGHSALLNSPQDGLKDKDKIESLPGQPLGVNFD 88
K ++ + SK + + +++ S S++ +S + QDGLKD D+I++LPGQP G+N D
Sbjct: 21 KLMQAQRSKRQSEGHSIESMSTE------YSPVYMGSQDGLKDGDRIQALPGQPNGLNLD 74
Query: 89 QYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNK 148
QYSGYV VD Q GR+LFYYFVES QNSSSKPLVLWLNGGPG SS G+G MMELGPFRVN
Sbjct: 75 QYSGYVTVDPQAGRALFYYFVES-QNSSSKPLVLWLNGGPGCSSLGSGAMMELGPFRVNG 133
Query: 149 DGKTLYQNEYAWNK----------------------DYKVNGDIRTARDSYTFLVSWLAR 186
DG TL NEYAW+ DY +GD +TA D+YTFL++WL R
Sbjct: 134 DGNTLSYNEYAWSNVANILFLESPAGVGFSYSNTTSDYDKSGDKQTAEDNYTFLLNWLER 193
Query: 187 FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKG 246
FPEYKTRDFFI GESYAGHY+PQL+Q IL NN+ NQT+INL+GIA+GNA ID ET +KG
Sbjct: 194 FPEYKTRDFFITGESYAGHYVPQLSQKILQNNKITNQTVINLKGIAIGNAWIDYETGLKG 253
Query: 247 TVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCN 306
DF+WTH+L+ DEI G+ + NF+S + VC +++D DAA G IY YDIYAPLC+
Sbjct: 254 MYDFFWTHSLISDEINEGINLNCNFSSETTISDVCEQYLDAADAAVGYIYIYDIYAPLCS 313
Query: 307 SSSKFNTEIA--------------NSGEINRN----------------------WKDKPQ 330
SSS I+ N E+ ++ WKD P
Sbjct: 314 SSSNSTRPISVFDPCSEDYIQTYLNIPEVQKSMHANVTNIPGPWESCNDAIFYGWKDMPL 373
Query: 331 TVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYA 390
TVLP+I+ELM GI +W+YSGDTDG +P T TRY++ LGT V+T WYPWYTQGEVGGYA
Sbjct: 374 TVLPVIEELMVSGISVWIYSGDTDGRVPTTSTRYSINNLGTSVKTPWYPWYTQGEVGGYA 433
Query: 391 VGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFINGTLP 429
VGY+NL+FVT+RGAGHFVPSYQP RAL FSSF+ G LP
Sbjct: 434 VGYKNLSFVTIRGAGHFVPSYQPTRALAFFSSFLAGKLP 472
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147811059|emb|CAN63486.1| hypothetical protein VITISV_017087 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 261/490 (53%), Positives = 325/490 (66%), Gaps = 68/490 (13%)
Query: 1 MANSAFIIWISLLCLSNW-KCYGWIDMNPL-KFIKEELSKER-DNYALTSYSSDIYAVAG 57
M + F+ +SL CL +C+G + L K ++ + SK + + +++ S S++
Sbjct: 1 MKAAFFLTLLSLTCLVALVQCHGGSRYDLLGKLMQAQRSKRQSEGHSVESMSTE------ 54
Query: 58 HSALLNSPQDGLKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSS 117
+S + QDGLKD D+I++LPGQP G+N DQYSGYV VD Q GR+LFYYFVES QNSSS
Sbjct: 55 YSPVYMGSQDGLKDGDRIQALPGQPNGLNLDQYSGYVTVDPQAGRALFYYFVES-QNSSS 113
Query: 118 KPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWN---------------- 161
KPLVLWLNGGPG SS G+G MMELGPFRVN DG TL NEYAW+
Sbjct: 114 KPLVLWLNGGPGCSSLGSGAMMELGPFRVNSDGNTLSYNEYAWSNVANILFLESPAGVGF 173
Query: 162 ------KDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAIL 215
DY +GD +TA D+YTFL++WL RFPEYKTRDFFI GESYAGHY+PQL+Q IL
Sbjct: 174 SYSNTTSDYDKSGDKQTAEDNYTFLLNWLERFPEYKTRDFFITGESYAGHYVPQLSQKIL 233
Query: 216 YNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLN 275
NN+ NQT+INL+GIA+GNA ID ET +KG DF+WTH+L+ DEI G+ + NF+S
Sbjct: 234 QNNKITNQTLINLKGIAIGNAWIDYETGLKGMYDFFWTHSLISDEINEGINLNCNFSSET 293
Query: 276 SSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIA--------------NSGEI 321
+ C +++D DAA G IY YDIYAPLC+SSS I+ N E+
Sbjct: 294 TISDACEQYLDDADAAIGYIYIYDIYAPLCSSSSNSTRPISVFDPCSEDYIQTYLNIPEV 353
Query: 322 NRN----------------------WKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPV 359
++ WKD P TVLP+I+ELM GI +W+YSGDTDG +P
Sbjct: 354 QKSMHANVTNIPGPWESCNDAIFYGWKDMPLTVLPVIEELMVSGISVWIYSGDTDGRVPT 413
Query: 360 TCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVL 419
T TRY++ LGT V+T WYPWYTQGEVGGYAVGY+NL+FVT+RGAGHFVPSYQPARAL
Sbjct: 414 TSTRYSINNLGTSVKTPWYPWYTQGEVGGYAVGYKNLSFVTIRGAGHFVPSYQPARALAF 473
Query: 420 FSSFINGTLP 429
FSSF+ G LP
Sbjct: 474 FSSFLAGKLP 483
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458529|ref|XP_002282331.1| PREDICTED: serine carboxypeptidase II-3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/428 (53%), Positives = 277/428 (64%), Gaps = 55/428 (12%)
Query: 59 SALLNSPQDGLKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSK 118
S L PQDGL DKIESLPGQP GVNFDQY+GYV VD + GR+LFYYFVESP++SS+K
Sbjct: 62 SPLYIGPQDGLMQDDKIESLPGQPEGVNFDQYAGYVTVDPKAGRALFYYFVESPEDSSTK 121
Query: 119 PLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWN----------------- 161
PLVLWLNGGPG SS G G M ELGPFRVN DGKTL++NEYAWN
Sbjct: 122 PLVLWLNGGPGCSSLGYGAMEELGPFRVNPDGKTLFRNEYAWNNVSNVIFLESPAGVGFS 181
Query: 162 -----KDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILY 216
DY GD +TA DSYTFL++WL RFP+YKTRDFFI GESY+GHY+PQLA IL
Sbjct: 182 YSNTSSDYVNVGDKKTAEDSYTFLINWLERFPQYKTRDFFITGESYSGHYVPQLAYTILS 241
Query: 217 NNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNS 276
NN NQT+INL+GIA+GNA ID T +KG D+ WTHAL DE G+ +F + N
Sbjct: 242 NNNKTNQTVINLKGIAIGNAWIDDNTSLKGIYDYIWTHALSSDESNAGIQKYCDFTTGNF 301
Query: 277 SDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIA-----------------NSG 319
S K CL++ Q + GNI Y+IYAPLC+SS + + N
Sbjct: 302 STK-CLDYTYQAEGEVGNIDIYNIYAPLCHSSGPTSRSVGSVNDFDPCSDYYVESYLNLA 360
Query: 320 EINR---------------NWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRY 364
E+ + W D P T+LP I++LMA GI +W+YSGDTDG +PVT +RY
Sbjct: 361 EVQKALHARNTTWGACSGVGWTDSPTTILPTIKQLMASGISVWIYSGDTDGRVPVTSSRY 420
Query: 365 AVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFI 424
++ PV+TAW PWY EVGGY V Y+ + F TVRGAGH VPSYQP RAL + +SF+
Sbjct: 421 SINTFKLPVKTAWRPWYYNKEVGGYVVEYKGVVFATVRGAGHLVPSYQPGRALTMIASFL 480
Query: 425 NGTLPPPA 432
GTLPPP+
Sbjct: 481 QGTLPPPS 488
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302142365|emb|CBI19568.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/428 (53%), Positives = 277/428 (64%), Gaps = 55/428 (12%)
Query: 59 SALLNSPQDGLKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSK 118
S L PQDGL DKIESLPGQP GVNFDQY+GYV VD + GR+LFYYFVESP++SS+K
Sbjct: 591 SPLYIGPQDGLMQDDKIESLPGQPEGVNFDQYAGYVTVDPKAGRALFYYFVESPEDSSTK 650
Query: 119 PLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWN----------------- 161
PLVLWLNGGPG SS G G M ELGPFRVN DGKTL++NEYAWN
Sbjct: 651 PLVLWLNGGPGCSSLGYGAMEELGPFRVNPDGKTLFRNEYAWNNVSNVIFLESPAGVGFS 710
Query: 162 -----KDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILY 216
DY GD +TA DSYTFL++WL RFP+YKTRDFFI GESY+GHY+PQLA IL
Sbjct: 711 YSNTSSDYVNVGDKKTAEDSYTFLINWLERFPQYKTRDFFITGESYSGHYVPQLAYTILS 770
Query: 217 NNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNS 276
NN NQT+INL+GIA+GNA ID T +KG D+ WTHAL DE G+ +F + N
Sbjct: 771 NNNKTNQTVINLKGIAIGNAWIDDNTSLKGIYDYIWTHALSSDESNAGIQKYCDFTTGNF 830
Query: 277 SDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIA-----------------NSG 319
S K CL++ Q + GNI Y+IYAPLC+SS + + N
Sbjct: 831 STK-CLDYTYQAEGEVGNIDIYNIYAPLCHSSGPTSRSVGSVNDFDPCSDYYVESYLNLA 889
Query: 320 EINR---------------NWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRY 364
E+ + W D P T+LP I++LMA GI +W+YSGDTDG +PVT +RY
Sbjct: 890 EVQKALHARNTTWGACSGVGWTDSPTTILPTIKQLMASGISVWIYSGDTDGRVPVTSSRY 949
Query: 365 AVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFI 424
++ PV+TAW PWY EVGGY V Y+ + F TVRGAGH VPSYQP RAL + +SF+
Sbjct: 950 SINTFKLPVKTAWRPWYYNKEVGGYVVEYKGVVFATVRGAGHLVPSYQPGRALTMIASFL 1009
Query: 425 NGTLPPPA 432
GTLPPP+
Sbjct: 1010 QGTLPPPS 1017
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357443925|ref|XP_003592240.1| Serine carboxypeptidase-like protein [Medicago truncatula] gi|355481288|gb|AES62491.1| Serine carboxypeptidase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/433 (51%), Positives = 278/433 (64%), Gaps = 64/433 (14%)
Query: 59 SALLNSPQDGLKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSK 118
SA +PQ+GL+ DKI++LPGQP GVNFDQYSGYV V+ + GR LFYYFVESP NSS+K
Sbjct: 60 SAPYVTPQEGLRQADKIDTLPGQPYGVNFDQYSGYVTVNPEAGRELFYYFVESPYNSSTK 119
Query: 119 PLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK---------------- 162
PLVLWLNGGPG SS G G ELGPFR+N DGKTLY+N+YAWN+
Sbjct: 120 PLVLWLNGGPGCSSLGYGAFQELGPFRINSDGKTLYRNQYAWNEVANVLFLESPAGVGFS 179
Query: 163 ------DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILY 216
DY +GD TA+DSY FL++WL RFP+YKTR F+IAGESYAGHY+PQLA IL+
Sbjct: 180 YSNTTSDYDKSGDKSTAKDSYVFLINWLERFPQYKTRAFYIAGESYAGHYVPQLASTILH 239
Query: 217 NNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSY-----NF 271
NN+ N T+INL+GI++GNA ID T +KG D++WTHAL D+ H L Y +F
Sbjct: 240 NNKLYNNTVINLKGISIGNAWIDDATSLKGLFDYFWTHALNSDQT-HELIEKYCDFTVDF 298
Query: 272 ASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFN------------------- 312
S N+S +C D+ G I Y+IYAPLC+ SS N
Sbjct: 299 TSGNTS-AICNNVTDRAYTEKGKIDFYNIYAPLCHDSSLKNGSTGYVSNDFDPCSDYYGI 357
Query: 313 ----------------TEIANSGEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGA 356
T + EIN WKD P TVLP I+ L+ GI++W+YSGDTDG
Sbjct: 358 AYLNRPEVQQALHAKPTNWSYCSEINSKWKDSPITVLPTIKYLIDSGIKLWIYSGDTDGR 417
Query: 357 LPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARA 416
+PVT +RY++ L P+ AW+PWY+ E+GGY VGY+ LTFVTVRGAGH VPS+QP RA
Sbjct: 418 VPVTSSRYSINTLKLPINDAWHPWYSGKEIGGYVVGYKGLTFVTVRGAGHLVPSWQPERA 477
Query: 417 LVLFSSFINGTLP 429
L L SSF+ G+LP
Sbjct: 478 LTLISSFLYGSLP 490
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356547861|ref|XP_003542323.1| PREDICTED: serine carboxypeptidase II-3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/427 (51%), Positives = 279/427 (65%), Gaps = 56/427 (13%)
Query: 58 HSALLNSPQDGLKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSS 117
HSA +PQ+GL+ DKI +LPGQP GVNFDQYSG+V VD + GRSLFYYFVESP NSS+
Sbjct: 2 HSAAYVAPQEGLRQADKIVTLPGQPHGVNFDQYSGHVTVDPKTGRSLFYYFVESPHNSSA 61
Query: 118 KPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK--------------- 162
KPLVLWLNGGPG SS G G ELGPFRVN DGKTL+ N+YAWN+
Sbjct: 62 KPLVLWLNGGPGCSSLGYGAFEELGPFRVNSDGKTLFHNKYAWNEVANVLFLESPAGVGF 121
Query: 163 -------DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAIL 215
DY +GD TA+D+Y FL++WL RFPEYKTR+F+I GESYAGHY+PQLA IL
Sbjct: 122 SYSNTTSDYDRSGDKSTAKDAYVFLINWLERFPEYKTREFYITGESYAGHYVPQLAYTIL 181
Query: 216 YNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLN 275
NN+ + Q+ INL+GIA+GNALID T +KG D++WTHAL D+ +H + +F S N
Sbjct: 182 VNNKFSQQS-INLKGIAIGNALIDDVTTIKGIFDYFWTHALNSDQTHHLIKKYCDFTSEN 240
Query: 276 SSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIA-----------------NS 318
S C+ G+I S +IYAPLC SS N N
Sbjct: 241 IS-AACINATISSILEKGSIDSSNIYAPLCYDSSLKNGSTGSVYDFDPCSAYYVEAYLNR 299
Query: 319 GEINR---------------NWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTR 363
E+ + +WKD P T+LPII+ L+A I++W+YSGDTD +PVT +R
Sbjct: 300 PEVQKALHAKPTNWTHCSGFDWKDSPTTILPIIEYLIASHIKLWIYSGDTDATVPVTSSR 359
Query: 364 YAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSF 423
Y++ L P++ W+PWY+ EVGGY VGY+ +TFVTVRGAGHFVPS+QPAR+L + SSF
Sbjct: 360 YSINTLRLPIQVDWHPWYSGNEVGGYVVGYKAVTFVTVRGAGHFVPSWQPARSLTMISSF 419
Query: 424 INGTLPP 430
++GTLPP
Sbjct: 420 LSGTLPP 426
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357462111|ref|XP_003601337.1| Serine carboxypeptidase-like protein [Medicago truncatula] gi|355490385|gb|AES71588.1| Serine carboxypeptidase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/433 (51%), Positives = 277/433 (63%), Gaps = 64/433 (14%)
Query: 59 SALLNSPQDGLKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSK 118
SA +PQ+GL+ DKI++LPGQP GVNFDQYSGYV V+ + GR LFYYFVESP NSS+K
Sbjct: 60 SAPYVTPQEGLRQADKIDTLPGQPYGVNFDQYSGYVTVNPEAGRELFYYFVESPYNSSTK 119
Query: 119 PLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK---------------- 162
PLVLWLNGGPG SS G G ELGPFR+N DGKTLY+N+YAW +
Sbjct: 120 PLVLWLNGGPGCSSLGYGAFQELGPFRINSDGKTLYRNQYAWTEVANVLFLESPAGVGFS 179
Query: 163 ------DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILY 216
DY +GD TA+DSY FL++WL RFP+YKTR F+IAGESYAGHY+PQLA IL+
Sbjct: 180 YSNTTSDYDKSGDKSTAKDSYVFLINWLERFPQYKTRAFYIAGESYAGHYVPQLASTILH 239
Query: 217 NNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSY-----NF 271
NN+ N T+INL+GI++GNA ID T +KG D++WTHAL D+ H L Y +F
Sbjct: 240 NNKLYNNTVINLKGISIGNAWIDDATSLKGLFDYFWTHALNSDQT-HELIEKYCDFTVDF 298
Query: 272 ASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFN------------------- 312
S N+S +C D+ G I Y+IYAPLC+ SS N
Sbjct: 299 TSGNTS-AICNNVTDRAYTEKGKIDFYNIYAPLCHDSSLKNGSTGYVSNDFDPCSDYYGI 357
Query: 313 ----------------TEIANSGEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGA 356
T + EIN WKD P TVLP I+ L+ GI++W+YSGDTDG
Sbjct: 358 AYLNRPEVQQALHAKPTNWSYCSEINSKWKDSPITVLPTIKYLIDSGIKLWIYSGDTDGR 417
Query: 357 LPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARA 416
+PVT +RY++ L P+ AW+PWY+ E+GGY VGY+ LTFVTVRGAGH VPS+QP RA
Sbjct: 418 VPVTSSRYSINTLKLPINDAWHPWYSGKEIGGYVVGYKGLTFVTVRGAGHLVPSWQPERA 477
Query: 417 LVLFSSFINGTLP 429
L L SSF+ G+LP
Sbjct: 478 LTLISSFLYGSLP 490
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552178|ref|XP_003544446.1| PREDICTED: serine carboxypeptidase II-3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/460 (47%), Positives = 283/460 (61%), Gaps = 60/460 (13%)
Query: 30 KFIKEELSKERDNYALTSYSSDIYAVAGHSAL-LNSPQDGLKDKDKIESLPGQP-LGVNF 87
KFI+ + +++R +S ++++ S + + Q GL + DK+++LPGQP GV+F
Sbjct: 33 KFIQTKRAQKRSYGEASSMATNLGGDEHFSKVYVVKEQSGLMEGDKVKALPGQPSQGVDF 92
Query: 88 DQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVN 147
DQY+GYV VD++ GR+LFYYFVESP N+S++PLVLWLNGGPG SSFG G M ELGPFRVN
Sbjct: 93 DQYAGYVTVDAKAGRALFYYFVESPHNASNRPLVLWLNGGPGCSSFGYGAMQELGPFRVN 152
Query: 148 KDGKTLYQNEYAWN----------------------KDYKVNGDIRTARDSYTFLVSWLA 185
DGKTLY+N+YAWN DY GD TA DSYTFL++WL
Sbjct: 153 SDGKTLYRNQYAWNNVANVIFLESPAGVGFSYSNTSSDYTKTGDKSTAMDSYTFLLNWLE 212
Query: 186 RFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMK 245
RFP+YKTRD FI GESYAGHY+PQLA IL N+ N T+INL+GIA+GN ID K
Sbjct: 213 RFPQYKTRDLFITGESYAGHYVPQLADTILTYNKLTNHTVINLKGIAVGNGWIDDNMCGK 272
Query: 246 GTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLC 305
G +++WTHAL DE + G+ +F S N + + C ++ +GD G+I YDIYAP C
Sbjct: 273 GMYEYFWTHALNSDETHEGIQRYCDFESGNLTGE-CSKYQSRGDTEIGSIDIYDIYAPPC 331
Query: 306 NSSSK--------------------FNTEIANSGEINR---------------NWKDKPQ 330
+S++K + N E+ W D P
Sbjct: 332 DSAAKKPGSSPATNYDSNFDPCSDDYTNSYLNLAEVQEALHAKASVWYPCRGVGWTDSPA 391
Query: 331 TVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYA 390
T+LP I L++ GI W+YSGDTDG +P+T +RY+V L PV T W PWY+ EVGGY
Sbjct: 392 TILPTINRLISSGINTWIYSGDTDGRVPITSSRYSVNALKLPVETTWRPWYSSNEVGGYL 451
Query: 391 VGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFINGTLPP 430
VGY+ LT +TVRGAGH VPSYQP RAL + S F+ G LPP
Sbjct: 452 VGYKGLTLITVRGAGHMVPSYQPQRALTMISFFLLGELPP 491
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 432 | ||||||
| TAIR|locus:2087368 | 502 | scpl40 "serine carboxypeptidas | 0.303 | 0.260 | 0.511 | 2.4e-98 | |
| TAIR|locus:2078598 | 473 | scpl25 "serine carboxypeptidas | 0.379 | 0.346 | 0.428 | 9.9e-92 | |
| TAIR|locus:2061436 | 464 | scpl22 "serine carboxypeptidas | 0.243 | 0.226 | 0.580 | 1.8e-90 | |
| TAIR|locus:2058734 | 462 | scpl28 "serine carboxypeptidas | 0.335 | 0.313 | 0.468 | 4.2e-89 | |
| TAIR|locus:2077422 | 459 | SCPL27 "serine carboxypeptidas | 0.335 | 0.315 | 0.421 | 3.5e-88 | |
| TAIR|locus:2039275 | 452 | scpl26 "serine carboxypeptidas | 0.331 | 0.316 | 0.421 | 2.8e-87 | |
| TAIR|locus:2086137 | 478 | scpl33 "serine carboxypeptidas | 0.342 | 0.309 | 0.427 | 4.2e-73 | |
| TAIR|locus:2118706 | 465 | BRS1 "BRI1 SUPPRESSOR 1" [Arab | 0.263 | 0.245 | 0.547 | 6.8e-67 | |
| TAIR|locus:2008480 | 463 | SCPL32 "serine carboxypeptidas | 0.275 | 0.257 | 0.520 | 7.7e-66 | |
| TAIR|locus:2166870 | 499 | SCPL34 "serine carboxypeptidas | 0.451 | 0.390 | 0.373 | 3.3e-63 |
| TAIR|locus:2087368 scpl40 "serine carboxypeptidase-like 40" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 373 (136.4 bits), Expect = 2.4e-98, Sum P(3) = 2.4e-98
Identities = 68/133 (51%), Positives = 93/133 (69%)
Query: 299 DIYAPLCNSSSKFNTEIANSGEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALP 358
++ A L +++K E + + W D P TV+P+I+ELM +G+R+WV+SGDTDG +P
Sbjct: 365 EVQAALHANATKLPYEWQPCSSVIKKWNDSPTTVIPLIKELMGQGVRVWVFSGDTDGRIP 424
Query: 359 VTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQN-LTFVTVRGAGHFVPSYQPARAL 417
VT T+Y++KK+ +TAW+PWY GEVGGY Y+ LTF TVRGAGH VPS+QP R+L
Sbjct: 425 VTSTKYSLKKMNLTAKTAWHPWYLGGEVGGYTEEYKGKLTFATVRGAGHQVPSFQPKRSL 484
Query: 418 VLFSSFINGT-LP 429
LF F+N T LP
Sbjct: 485 SLFIHFLNDTPLP 497
|
|
| TAIR|locus:2078598 scpl25 "serine carboxypeptidase-like 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 337 (123.7 bits), Expect = 9.9e-92, Sum P(3) = 9.9e-92
Identities = 72/168 (42%), Positives = 99/168 (58%)
Query: 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAIL-YNNQHANQTII 226
GD RTA+DS FL+ WL RFP Y R+ +I GESYAGHY+PQLA+ I+ YN + N +
Sbjct: 152 GDRRTAKDSLQFLIQWLHRFPRYNHREIYITGESYAGHYVPQLAKEIMNYNKRSKNP--L 209
Query: 227 NLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFID 286
NL+GI +GNA+ D GTV ++W+HA++ D YH L S+ +F+ SD+ +
Sbjct: 210 NLKGIMVGNAVTDNHYDNLGTVSYWWSHAMISDRTYHQLISTCDFSRQKESDECETLYSY 269
Query: 287 QGDAAAGNIYSYDIYAPLCNSSSKFNTEI-ANSGEINRNWKDKPQTVL 333
+ GNI Y+IYAP CN SS +SG + P +VL
Sbjct: 270 AMEQEFGNIDQYNIYAPPCNKSSDGGGSYNGSSGRRSMRLPHLPHSVL 317
|
|
| TAIR|locus:2061436 scpl22 "serine carboxypeptidase-like 22" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 342 (125.4 bits), Expect = 1.8e-90, Sum P(3) = 1.8e-90
Identities = 61/105 (58%), Positives = 77/105 (73%)
Query: 322 NRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWY 381
N NW+D ++LPI +EL+A G+RIWVYSGDTD +PVT TRY++ KL V+T WYPWY
Sbjct: 353 NWNWRDSDNSMLPIYKELIAAGLRIWVYSGDTDSVIPVTATRYSLGKLNLRVKTRWYPWY 412
Query: 382 TQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFING 426
+ +VGG Y+ LTFVTVRGAGH VP +QP AL+L SF+ G
Sbjct: 413 SGNQVGGRTEVYEGLTFVTVRGAGHEVPFFQPQSALILLRSFLAG 457
|
|
| TAIR|locus:2058734 scpl28 "serine carboxypeptidase-like 28" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 328 (120.5 bits), Expect = 4.2e-89, Sum P(3) = 4.2e-89
Identities = 68/145 (46%), Positives = 88/145 (60%)
Query: 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIIN 227
GD RT D+Y FLV WL RFPEYK R F+IAGESYAGHYIP+LAQ I+ N+ A IN
Sbjct: 153 GDKRTGEDAYRFLVRWLERFPEYKERAFYIAGESYAGHYIPELAQLIVNRNKGAKNPTIN 212
Query: 228 LRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQ 287
L+GI MGN L+D KG D++W H L+ DE Y+ LT S+ C ++Q
Sbjct: 213 LKGILMGNPLVDDYNDNKGMRDYWWNHGLISDESYNDLTKWCLNDSILFPKLNCNAALNQ 272
Query: 288 GDAAAGNIYSYDIYAPLCNSSSKFN 312
+ G+I Y+I +P C + + N
Sbjct: 273 ALSEFGDIDPYNINSPACTTHASSN 297
|
|
| TAIR|locus:2077422 SCPL27 "serine carboxypeptidase-like 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 317 (116.6 bits), Expect = 3.5e-88, Sum P(3) = 3.5e-88
Identities = 62/147 (42%), Positives = 89/147 (60%)
Query: 163 DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHAN 222
D GD RTA DSY FLV+W RFP+YK R+F+I GESYAGH++PQL++ + N+
Sbjct: 146 DLYTTGDQRTAEDSYIFLVNWFERFPQYKHREFYIVGESYAGHFVPQLSKLVHERNKGFK 205
Query: 223 QTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGL-TSSYNFASLNSSDKVC 281
INL+G +GNA+ D GT +++W H L+ D YH L T+ Y+ +S + S + C
Sbjct: 206 NPAINLKGFMVGNAVTDDYHDYIGTFEYWWNHGLISDSTYHQLKTACYSVSSQHPSMQ-C 264
Query: 282 LEFIDQGDAAAGNIYSYDIYAPLCNSS 308
+ + + GNI Y I+ CNS+
Sbjct: 265 MVALRNAELEQGNIDPYSIFTKPCNST 291
|
|
| TAIR|locus:2039275 scpl26 "serine carboxypeptidase-like 26" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 313 (115.2 bits), Expect = 2.8e-87, Sum P(3) = 2.8e-87
Identities = 62/147 (42%), Positives = 83/147 (56%)
Query: 163 DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHAN 222
D GD RTA D+Y FLV W RFP+YK R+F+IAGESYAGHY+PQL+Q I+Y ++
Sbjct: 142 DLYTAGDQRTAEDAYVFLVKWFERFPQYKHREFYIAGESYAGHYVPQLSQ-IVYEKRNP- 199
Query: 223 QTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCL 282
IN +G +GNA+ID G +++W H L+ D YH L + F S C
Sbjct: 200 --AINFKGFIVGNAVIDDYHDYVGLFEYWWAHGLISDLTYHNLRITCEFGSSEHPSSKCT 257
Query: 283 EFIDQGDAAAGNIYSYDIYAPLCNSSS 309
+ ++ D GNI Y IY C +
Sbjct: 258 KAMEAADLEQGNIDPYSIYTVTCKKEA 284
|
|
| TAIR|locus:2086137 scpl33 "serine carboxypeptidase-like 33" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 301 (111.0 bits), Expect = 4.2e-73, Sum P(3) = 4.2e-73
Identities = 65/152 (42%), Positives = 91/152 (59%)
Query: 161 NKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQ- 219
+ D + D A D+Y F+V+W AR+P+YK+RDFFIAGESYAGHY PQLA+ I N+
Sbjct: 148 SSDLENLNDAFVAEDAYNFMVAWFARYPQYKSRDFFIAGESYAGHYSPQLAELIYDRNKV 207
Query: 220 HANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDK 279
+ INL+G +GN L D E KG +++ W+HA++ D +Y + +F S N S+
Sbjct: 208 QPKDSFINLKGFIVGNPLTDDEYDNKGILEYAWSHAVISDHLYDSAKHNCDFKSSNWSEP 267
Query: 280 VCLEFIDQGDAAAGNIYSYDIYAPLC--NSSS 309
C ++ I Y+IYAP C NSSS
Sbjct: 268 -CNVAMNTVFTKYKEIDIYNIYAPKCISNSSS 298
|
|
| TAIR|locus:2118706 BRS1 "BRI1 SUPPRESSOR 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 353 (129.3 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
Identities = 63/115 (54%), Positives = 83/115 (72%)
Query: 316 ANSGEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRT 375
A S + + WKD +T+LPI +EL A G+RIW++SGDTD +PVT TR+++ L PV+T
Sbjct: 348 ACSDVLIKTWKDSDKTMLPIYKELAASGLRIWIFSGDTDSVVPVTATRFSLSHLNLPVKT 407
Query: 376 AWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFINGT-LP 429
WYPWYT +VGG+ Y+ LTF TVRGAGH VP ++P RAL+LF SF+ G LP
Sbjct: 408 RWYPWYTDNQVGGWTEVYKGLTFATVRGAGHEVPLFEPKRALILFRSFLAGKELP 462
|
|
| TAIR|locus:2008480 SCPL32 "serine carboxypeptidase-like 32" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 353 (129.3 bits), Expect = 7.7e-66, Sum P(2) = 7.7e-66
Identities = 63/121 (52%), Positives = 85/121 (70%)
Query: 312 NTEIANSGEINR-NWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLG 370
N I N +N NW D ++VLPI ++L+A G R+WVYSGDTDG +PV TRY + KL
Sbjct: 341 NWTICNDDILNHWNWTDSKRSVLPIYKKLIAGGFRVWVYSGDTDGRVPVLSTRYCINKLE 400
Query: 371 TPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFINGTLPP 430
P++TAW PWY + +V G+ Y+ LTF T RGAGH VPS++P+ +L FS+F+NG +PP
Sbjct: 401 LPIKTAWRPWYHETQVSGWFQEYEGLTFATFRGAGHDVPSFKPSESLAFFSAFLNG-VPP 459
Query: 431 P 431
P
Sbjct: 460 P 460
|
|
| TAIR|locus:2166870 SCPL34 "serine carboxypeptidase-like 34" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 348 (127.6 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 77/206 (37%), Positives = 119/206 (57%)
Query: 127 GPGFSSFGAGTMMELGPFRVNKDGKTLYQNE-----YAW---NKDYKVNGDIRTARDSYT 178
GP F + ++L P+ NK L+ +++ ++D K GD TARDSY
Sbjct: 118 GPFFPQNSSQPKLKLNPYSWNKAANLLFLESPVGVGFSYTNTSRDIKQLGDTVTARDSYN 177
Query: 179 FLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQT-IINLRGIAMGNAL 237
FLV+W RFP+YK+ DF+IAGESYAGHY+PQL++ I N+ A++ INL+G+ +GNAL
Sbjct: 178 FLVNWFKRFPQYKSHDFYIAGESYAGHYVPQLSELIYKENKIASKKDFINLKGLMIGNAL 237
Query: 238 IDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYS 297
+D ET KG +++ W HA++ D +Y + + +F K C + +D+ +
Sbjct: 238 LDDETDQKGMIEYAWDHAVISDALYEKVNKNCDFKQ-KLVTKECNDALDEYFDVYKILDM 296
Query: 298 YDIYAPLCNSSSKFNTEIANSGEINR 323
Y +YAP C +S N+ ++S NR
Sbjct: 297 YSLYAPKCVPTST-NSSTSHSVAGNR 321
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 432 | |||
| pfam00450 | 415 | pfam00450, Peptidase_S10, Serine carboxypeptidase | 1e-131 | |
| PLN03016 | 433 | PLN03016, PLN03016, sinapoylglucose-malate O-sinap | 2e-42 | |
| PLN02209 | 437 | PLN02209, PLN02209, serine carboxypeptidase | 2e-39 | |
| PTZ00472 | 462 | PTZ00472, PTZ00472, serine carboxypeptidase (CBP1) | 2e-32 | |
| COG2939 | 498 | COG2939, COG2939, Carboxypeptidase C (cathepsin A) | 7e-27 | |
| PLN02213 | 319 | PLN02213, PLN02213, sinapoylglucose-malate O-sinap | 1e-25 |
| >gnl|CDD|215926 pfam00450, Peptidase_S10, Serine carboxypeptidase | Back alignment and domain information |
|---|
Score = 383 bits (985), Expect = e-131
Identities = 159/418 (38%), Positives = 208/418 (49%), Gaps = 73/418 (17%)
Query: 79 PGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTM 138
PG + F QYSGY+ VD GRSLFY+F ES N + PLVLWLNGGPG SS G G
Sbjct: 1 PGLDGPLPFKQYSGYLTVDESAGRSLFYWFFESENNPENDPLVLWLNGGPGCSSLG-GLF 59
Query: 139 MELGPFRVNKDGKTLYQNEYAWNK----------------------DYKVNGDIRTARDS 176
ELGPFRVN G TLY N Y+WNK DYK + D TA+D+
Sbjct: 60 EELGPFRVN-SGPTLYLNPYSWNKVANVLFLDQPVGVGFSYSNTTSDYKTD-DEETAKDN 117
Query: 177 YTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNA 236
Y FL + +FPEYK F+IAGESYAGHY+P LAQ IL N+ INL+G+ +GN
Sbjct: 118 YEFLQKFFEKFPEYKNNPFYIAGESYAGHYVPALAQEILDGNKKGTGPNINLKGVLIGNG 177
Query: 237 LIDLETMMKGTVDFYWTHALMPDEIYHGLTSS--YNFASLNSSDKVCLEFIDQGD---AA 291
L D + F + H L+ DE+Y L + + + ++ CL +++ A
Sbjct: 178 LTDPAIQYNSYIPFAYYHGLISDELYESLKKACCGKYPDCDPANTKCLNLVEEASGCNAY 237
Query: 292 AGNIYSYDIYAPLCNSSSK------------------------FNTEI------ANSGEI 321
G I Y+IY P C +SS N AN G +
Sbjct: 238 NGGINPYNIYTPCCYNSSLSLNPSSTDSCGGYDCYDESYVEKYLNRPDVRKALHANKGSV 297
Query: 322 NR---------NW--KDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLG 370
NW D +++LPI+ +L+ G+R+ +YSGD D T+ + L
Sbjct: 298 GEWSRCNDEVFNWYGDDISKSMLPILPKLLEGGLRVLIYSGDHDLICNFLGTQAWIDALN 357
Query: 371 TPVRTAWYPWYTQ--GEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFING 426
+ + PWY G+V GY Y NLTF TV+GAGH VP QP AL +F F++G
Sbjct: 358 WSGKDGFRPWYVSVDGQVAGYVKSYGNLTFATVKGAGHMVPEDQPEAALQMFKRFLSG 415
|
Length = 415 |
| >gnl|CDD|178590 PLN03016, PLN03016, sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Score = 154 bits (390), Expect = 2e-42
Identities = 105/412 (25%), Positives = 177/412 (42%), Gaps = 60/412 (14%)
Query: 75 IESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFG 134
++ LPG + F+ +GY+ + + FYYF++S N PL++WLNGGPG S G
Sbjct: 23 VKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLG 82
Query: 135 AGTMMELGP----FRV-NKDGKTLYQNEYAWNKDYKV--------------------NGD 169
G + E GP F V N +L+ Y+W K + GD
Sbjct: 83 -GIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGD 141
Query: 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLR 229
I + ++ FL WL+R P+Y + ++ G+SY+G +P L Q I N + INL+
Sbjct: 142 ISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQ 201
Query: 230 GIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYN--FASLNSSDKVCLEFIDQ 287
G +GN + ++ + + + L+ DEIY + N + +++ S+ CL+ ++
Sbjct: 202 GYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEE 261
Query: 288 GDAAAGNIYSYDIYAPLCNSSS-------------------------KFNTEIANSGEIN 322
I + I P C+ ++ + E + G+
Sbjct: 262 YHKCTAKINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWA 321
Query: 323 RNWKDKP-----QTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAW 377
R + P + +P G R +YSGD D A+P T+ ++ L W
Sbjct: 322 RCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNW 381
Query: 378 YPWYTQGEVGGYAVGYQN-LTFVTVRGAGHFVPSYQPARALVLFSSFINGTL 428
PW ++ GY Y N +TF T++ GH Y+P ++F +I+G
Sbjct: 382 RPWMINNQIAGYTRAYSNKMTFATIKAGGH-TAEYRPNETFIMFQRWISGQP 432
|
Length = 433 |
| >gnl|CDD|177859 PLN02209, PLN02209, serine carboxypeptidase | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 2e-39
Identities = 106/412 (25%), Positives = 178/412 (43%), Gaps = 62/412 (15%)
Query: 75 IESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFG 134
++ LPG + F+ +GY+ + ++ FYYF++S +N PL++WLNGGPG S
Sbjct: 25 VKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL- 83
Query: 135 AGTMMELGPFRV-----NKDGKTLYQNEYAWNKDYKV--------------------NGD 169
+G E GP + N +L Y+W K + D
Sbjct: 84 SGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSD 143
Query: 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLR 229
+ + FL WL + P++ + F++ G+SY+G +P L I N INL+
Sbjct: 144 TSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQ 203
Query: 230 GIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTS--SYNFASLNSSDKVCLEFIDQ 287
G +GN + +E + + +L+ DE+Y L N+ S++ S+K CL+ +++
Sbjct: 204 GYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKKCLKLVEE 263
Query: 288 GDAAAGNIYSYDIYAPLCNSSSKF------------------NTEI---------ANSGE 320
NI S+ C+ S+ N E + GE
Sbjct: 264 YHKCTDNINSHHTLIANCDDSNTQHISPDCYYYPYHLVECWANNESVREALHVDKGSIGE 323
Query: 321 INRNWKDKP-----QTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRT 375
R+ + P ++ +P G R ++SGD D +P T+ +K L +
Sbjct: 324 WIRDHRGIPYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIID 383
Query: 376 AWYPWYTQGEVGGYAVGYQN-LTFVTVRGAGHFVPSYQPARALVLFSSFING 426
W PW +G++ GY Y N +TF TV+G GH Y P + ++F +I+G
Sbjct: 384 DWRPWMIKGQIAGYTRTYSNKMTFATVKGGGH-TAEYLPEESSIMFQRWISG 434
|
Length = 437 |
| >gnl|CDD|240429 PTZ00472, PTZ00472, serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 2e-32
Identities = 106/426 (24%), Positives = 160/426 (37%), Gaps = 94/426 (22%)
Query: 84 GVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSK-PLVLWLNGGPGFSSFGAGTMMELG 142
VN Q+SGY ++ ++Y+ P+N + + P++LW+ GGPG SS A + E G
Sbjct: 44 SVN--QWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFA-LLAENG 100
Query: 143 PFRVNKDGKTLYQNEYAWNK---------------------DYKVNGDIRTARDSYTFLV 181
P +N+ +Y N Y+WN DY N + + D Y FL
Sbjct: 101 PCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHN-ESEVSEDMYNFLQ 159
Query: 182 SWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241
++ + + D F+ GESY GHY P A I N+ + INL G+A+GN L D
Sbjct: 160 AFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPY 219
Query: 242 TMMKGTVDFYWTHA-------LMPDEIYHGLTS----------------SYNFASLNSSD 278
T W + +E Y ++S +S + +
Sbjct: 220 TQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSVAR 279
Query: 279 KVCLEFIDQGDAAAGNIYSYDIY----APLCNSSSKFNTEIAN----------------- 317
+C E+I A N +YDI PLC + +
Sbjct: 280 ALCNEYIAVYSATGLN--NYDIRKPCIGPLCYNMDNTIAFMNREDVQSSLGVKPATWQSC 337
Query: 318 SGEIN----RNWKDKPQTVLPIIQELMAEGIRIWVYSGDTD------------GALPVTC 361
+ E+N +W +P L+ +G+R+ +Y+GD D AL
Sbjct: 338 NMEVNLMFEMDWMKNFNYTVP---GLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPG 394
Query: 362 TRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQ-NLTFVTVRGAGHFVPSYQPARALVLF 420
P W G V A +FV V AGH VP QPA AL +
Sbjct: 395 NAEFNAAPDVPFSAVDGRW--AGLVRSAASNTSSGFSFVQVYNAGHMVPMDQPAVALTMI 452
Query: 421 SSFING 426
+ F+
Sbjct: 453 NRFLRN 458
|
Length = 462 |
| >gnl|CDD|225490 COG2939, COG2939, Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 7e-27
Identities = 60/204 (29%), Positives = 86/204 (42%), Gaps = 40/204 (19%)
Query: 88 DQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVN 147
Y+GY D++D F+Y ESP + +++P++ WLNGGPG SS G + ELGP R+
Sbjct: 75 RDYTGYP--DAEDF--FFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQ 129
Query: 148 KDGKTLYQ-NEYAWN--------------------KDYKVNGDIRTARDSYTFLVSWLAR 186
Y N +W D K +D Y+FL + +
Sbjct: 130 SGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVYSFLRLFFDK 189
Query: 187 FPEY--KTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGN-ALID---- 239
FP Y F+AGESY GHYIP A +L +N N +NL + +GN D
Sbjct: 190 FPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGN-VNLSSVLIGNGLWTDPLTQ 248
Query: 240 ---LETMMKGTVDFYWTHALMPDE 260
E + ++ E
Sbjct: 249 YLTYEPIAAEK---GPYDGVLSSE 269
|
Length = 498 |
| >gnl|CDD|165857 PLN02213, PLN02213, sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 1e-25
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 34/292 (11%)
Query: 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIIN 227
GDI + ++ FL WL+R P+Y + ++ G+SY+G +P L Q I N + IN
Sbjct: 26 GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPIN 85
Query: 228 LRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTS--SYNFASLNSSDKVCLEFI 285
L+G +GN + ++ + + + L+ DEIY + + N+ +++ S+ CL+
Sbjct: 86 LQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLT 145
Query: 286 DQGDAAAGNIYSYDIYAPLCNSSS-------------------------KFNTEIANSGE 320
++ I + I P C+ ++ + E + G+
Sbjct: 146 EEYHKCTAKINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGK 205
Query: 321 INRNWKDKPQ-----TVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRT 375
R + P + +P G R +YSGD D A+P T+ ++ L
Sbjct: 206 WARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIH 265
Query: 376 AWYPWYTQGEVGGYAVGYQN-LTFVTVRGAGHFVPSYQPARALVLFSSFING 426
W PW ++ GY Y N +TF T++ GH Y+P ++F +I+G
Sbjct: 266 NWRPWMINNQIAGYTRAYSNKMTFATIKAGGH-TAEYRPNETFIMFQRWISG 316
|
Length = 319 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 432 | |||
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 100.0 | |
| PLN02209 | 437 | serine carboxypeptidase | 100.0 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 100.0 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 100.0 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 100.0 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 100.0 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 100.0 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 100.0 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 98.78 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 98.68 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 98.57 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 98.52 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 98.45 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 98.38 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 98.34 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 98.33 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 98.33 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 98.31 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 98.24 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 98.23 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 98.08 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 98.05 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 98.04 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 98.02 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 98.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 98.0 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 97.99 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 97.96 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 97.94 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 97.93 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 97.87 | |
| PLN02578 | 354 | hydrolase | 97.84 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 97.82 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 97.79 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 97.78 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 97.5 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 97.47 | |
| PLN02511 | 388 | hydrolase | 97.42 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 97.34 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 97.33 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 97.32 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 97.32 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 97.31 | |
| PRK10566 | 249 | esterase; Provisional | 97.23 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 97.22 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 97.01 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 96.92 | |
| PRK10115 | 686 | protease 2; Provisional | 96.9 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 96.82 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 96.74 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 96.66 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 96.48 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 96.42 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 96.33 | |
| PRK07581 | 339 | hypothetical protein; Validated | 96.24 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 96.14 | |
| PLN02965 | 255 | Probable pheophorbidase | 96.0 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 95.89 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 95.67 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 95.57 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 95.13 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 95.04 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 94.85 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 94.84 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 94.79 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 94.78 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 93.45 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 92.31 | |
| PLN00021 | 313 | chlorophyllase | 91.96 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 91.62 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 90.99 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 90.83 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 90.03 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 89.59 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 89.18 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 88.74 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 88.63 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 87.64 | |
| PLN02872 | 395 | triacylglycerol lipase | 87.08 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 86.94 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 86.76 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 86.71 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 86.07 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 84.79 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 84.74 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 84.67 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 84.57 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 84.34 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 84.27 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 84.23 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 84.06 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 83.63 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 83.41 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 83.12 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 83.05 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 82.99 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 81.79 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 81.13 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 81.02 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 80.45 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 80.31 | |
| PLN02454 | 414 | triacylglycerol lipase | 80.26 |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-99 Score=767.54 Aligned_cols=362 Identities=47% Similarity=0.888 Sum_probs=325.9
Q ss_pred cccCCccccCCCCCCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcC
Q 042005 69 LKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNK 148 (432)
Q Consensus 69 ~~~~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~ 148 (432)
.++.++|++|||++.+++|++|||||+|+++.+++||||||||+++|++|||||||||||||||++ |+|.|+|||+++.
T Consensus 24 ~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~ 102 (454)
T KOG1282|consen 24 VDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKY 102 (454)
T ss_pred cchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcC
Confidence 346788999999998899999999999998889999999999999999999999999999999996 9999999999999
Q ss_pred CCCeeecCCCCCCC---------------CCc------ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccc
Q 042005 149 DGKTLYQNEYAWNK---------------DYK------VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYI 207 (432)
Q Consensus 149 ~~~~l~~N~~SW~~---------------~~~------~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yv 207 (432)
+|.+|..||||||| +|+ .++|+.+|+|++.||++||++||||++|+|||+|||||||||
T Consensus 103 ~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YV 182 (454)
T KOG1282|consen 103 NGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYV 182 (454)
T ss_pred CCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceeh
Confidence 98899999999999 232 258899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhhhccccc-----CCCChHHHH
Q 042005 208 PQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFAS-----LNSSDKVCL 282 (432)
Q Consensus 208 P~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~-----~~~~~~~C~ 282 (432)
|+||++|+++|+...++.|||||++||||++|+..+..++.+|+|.||+|++++++.+++.|.... ....+..|.
T Consensus 183 P~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~ 262 (454)
T KOG1282|consen 183 PALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCN 262 (454)
T ss_pred HHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHH
Confidence 999999999997544578999999999999999999999999999999999999999999998742 123467899
Q ss_pred HHHHHHH-HhcCCCcccccCCCcCCCCC-------------Cc-C---CCCcCccc---cc-----c--ccc--------
Q 042005 283 EFIDQGD-AAAGNIYSYDIYAPLCNSSS-------------KF-N---TEIANSGE---IN-----R--NWK-------- 326 (432)
Q Consensus 283 ~~~~~~~-~~~g~~n~Ydi~~~~c~~~~-------------~~-~---~pYLN~~~---~~-----~--~w~-------- 326 (432)
.+++.+. ...++++.|+++.+.|.... .+ . ..|||+++ ++ . .|.
T Consensus 263 ~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~Cn~~v~~ 342 (454)
T KOG1282|consen 263 KAVEEFDSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWERCNDEVNY 342 (454)
T ss_pred HHHHHHHHHHhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccccChhhhc
Confidence 9998888 55578999999888897411 01 1 23999999 12 1 364
Q ss_pred ---cCCCCcHHHHHHHHHcC-CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeec-CeeeeEEEEecceEEEEE
Q 042005 327 ---DKPQTVLPIIQELMAEG-IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQ-GEVGGYAVGYQNLTFVTV 401 (432)
Q Consensus 327 ---d~~~~~~~~l~~LL~~g-irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~-~~~~G~~k~~~nLTf~~V 401 (432)
+...++++.+..++.++ +|||||+||.|++||+.||++||++|++....+|+||+++ +|+|||+++|+||||+||
T Consensus 343 ~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tV 422 (454)
T KOG1282|consen 343 NYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATV 422 (454)
T ss_pred ccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEE
Confidence 45678889999999855 9999999999999999999999999999999999999995 899999999999999999
Q ss_pred cCCcccccccChHHHHHHHHHHHcCCCCCC
Q 042005 402 RGAGHFVPSYQPARALVLFSSFINGTLPPP 431 (432)
Q Consensus 402 ~~AGHmvP~dqP~~a~~m~~~fl~~~~~~~ 431 (432)
+|||||||.|||++|++||++||+|+++|.
T Consensus 423 rGaGH~VP~~~p~~al~m~~~fl~g~~l~~ 452 (454)
T KOG1282|consen 423 RGAGHMVPYDKPESALIMFQRFLNGQPLPS 452 (454)
T ss_pred eCCcccCCCCCcHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999999999999985
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-87 Score=686.68 Aligned_cols=360 Identities=28% Similarity=0.592 Sum_probs=304.2
Q ss_pred CcccCCccccCCCCCCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEc
Q 042005 68 GLKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVN 147 (432)
Q Consensus 68 ~~~~~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~ 147 (432)
+.+++|+|+.|||++.++++++|||||+|+++.+++||||||||+++|+++||||||||||||||+ +|+|.|+|||+++
T Consensus 18 ~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~ 96 (437)
T PLN02209 18 HVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALK 96 (437)
T ss_pred cCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceec
Confidence 344778999999998888999999999998777899999999999999999999999999999999 5999999999998
Q ss_pred CCC-----CeeecCCCCCCC---------------CCcc-----cCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccc
Q 042005 148 KDG-----KTLYQNEYAWNK---------------DYKV-----NGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESY 202 (432)
Q Consensus 148 ~~~-----~~l~~N~~SW~~---------------~~~~-----~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESY 202 (432)
.++ .++++||||||+ +|.. .+++++|+++++||+.||++||+|+++||||+||||
T Consensus 97 ~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESY 176 (437)
T PLN02209 97 NKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSY 176 (437)
T ss_pred cCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCc
Confidence 763 379999999999 2321 245678899999999999999999999999999999
Q ss_pred ccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhhhccccc--CCCChHH
Q 042005 203 AGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFAS--LNSSDKV 280 (432)
Q Consensus 203 aG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~--~~~~~~~ 280 (432)
||||||.+|++|+++|++.+++.||||||+||||++||..|..++.+|++.+|+|++++++++++.|.... ....+..
T Consensus 177 aG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~ 256 (437)
T PLN02209 177 SGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKK 256 (437)
T ss_pred CceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHH
Confidence 99999999999999886544568999999999999999999999999999999999999999999996421 1234578
Q ss_pred HHHHHHHHHHhcCCCcccccCCCcCCCCCC------c-C------CCCcCccc---cc-------cccccCC--------
Q 042005 281 CLEFIDQGDAAAGNIYSYDIYAPLCNSSSK------F-N------TEIANSGE---IN-------RNWKDKP-------- 329 (432)
Q Consensus 281 C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~------~-~------~pYLN~~~---~~-------~~w~d~~-------- 329 (432)
|..++..+......+|.|++....|..... + . ..|||+++ .+ ..|..+.
T Consensus 257 C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~~~~~~~~~~d 336 (437)
T PLN02209 257 CLKLVEEYHKCTDNINSHHTLIANCDDSNTQHISPDCYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHRGIPYKSD 336 (437)
T ss_pred HHHHHHHHHHHhhcCCccccccccccccccccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCCCCCccccchhhcccc
Confidence 988777665555667777654444542211 1 0 23999998 12 2464321
Q ss_pred -CCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecc-eEEEEEcCCccc
Q 042005 330 -QTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQN-LTFVTVRGAGHF 407 (432)
Q Consensus 330 -~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~n-LTf~~V~~AGHm 407 (432)
.+..+.+..+|++|+|||||+||.|++||+.|+++|+++|+|+++++|++|+++++++||+|+|+| |||++|+|||||
T Consensus 337 ~~~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHm 416 (437)
T PLN02209 337 IRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHT 416 (437)
T ss_pred hhhhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCC
Confidence 123344445555789999999999999999999999999999999999999999999999999996 999999999999
Q ss_pred ccccChHHHHHHHHHHHcCCCC
Q 042005 408 VPSYQPARALVLFSSFINGTLP 429 (432)
Q Consensus 408 vP~dqP~~a~~m~~~fl~~~~~ 429 (432)
|| |||++|++||++|+.+++|
T Consensus 417 Vp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 417 AE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred cC-cCHHHHHHHHHHHHcCCCC
Confidence 98 7999999999999999875
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-87 Score=683.21 Aligned_cols=357 Identities=28% Similarity=0.599 Sum_probs=306.2
Q ss_pred cCCccccCCCCCCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCC-
Q 042005 71 DKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKD- 149 (432)
Q Consensus 71 ~~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~- 149 (432)
..+.|++|||++.++++++||||++|+++.+++||||||||+++|+++||||||||||||||+ .|+|+|+|||+++.+
T Consensus 19 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 19 SASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEV 97 (433)
T ss_pred ccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccc
Confidence 446789999998778899999999998767789999999999999999999999999999999 599999999998643
Q ss_pred ----CCeeecCCCCCCC---------------CCc-----ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccc
Q 042005 150 ----GKTLYQNEYAWNK---------------DYK-----VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGH 205 (432)
Q Consensus 150 ----~~~l~~N~~SW~~---------------~~~-----~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~ 205 (432)
+.++.+||+|||+ +|. ..+|+++|++++.||++||++||+|+++||||+|||||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~ 177 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGM 177 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccce
Confidence 3578999999999 221 1245567799999999999999999999999999999999
Q ss_pred cchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhhhccccc--CCCChHHHHH
Q 042005 206 YIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFAS--LNSSDKVCLE 283 (432)
Q Consensus 206 yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~--~~~~~~~C~~ 283 (432)
|||++|++|+++|+...++.||||||+||||++||..|..++.+|+|.+|||++++++.+++.|.... ...+...|..
T Consensus 178 yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C~~ 257 (433)
T PLN03016 178 IVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLK 257 (433)
T ss_pred ehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHHHH
Confidence 99999999999986544568999999999999999999999999999999999999999999997431 1234678998
Q ss_pred HHHHHHHhcCCCcccccCCCcCCCCC----Cc-------CCCCcCccc---cc-------cccccCCC---------CcH
Q 042005 284 FIDQGDAAAGNIYSYDIYAPLCNSSS----KF-------NTEIANSGE---IN-------RNWKDKPQ---------TVL 333 (432)
Q Consensus 284 ~~~~~~~~~g~~n~Ydi~~~~c~~~~----~~-------~~pYLN~~~---~~-------~~w~d~~~---------~~~ 333 (432)
++..+....+.+|+|||+.+.|.... .+ ...|||+++ .+ ..|..|.. +..
T Consensus 258 ~~~~~~~~~~~~n~yni~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cn~~v~~~~d~~~~~ 337 (433)
T PLN03016 258 LTEEYHKCTAKINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIPYNHDIVSSI 337 (433)
T ss_pred HHHHHHHHhcCCChhhccCCcccccccCCCcccccchHHHHHHhCCHHHHHHhCCCCCCCCCCccCCcccccccccchhh
Confidence 88887777889999999866564211 01 024999997 12 24664322 233
Q ss_pred HHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecc-eEEEEEcCCcccccccC
Q 042005 334 PIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQN-LTFVTVRGAGHFVPSYQ 412 (432)
Q Consensus 334 ~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~n-LTf~~V~~AGHmvP~dq 412 (432)
+.+..++.+++|||||+||.|++||+.||++|+++|+|++.++|++|+++++++||+|+|+| |||++|++|||||| +|
T Consensus 338 ~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~q 416 (433)
T PLN03016 338 PYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YR 416 (433)
T ss_pred HHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CC
Confidence 44455555789999999999999999999999999999999999999999999999999985 99999999999998 79
Q ss_pred hHHHHHHHHHHHcCCCC
Q 042005 413 PARALVLFSSFINGTLP 429 (432)
Q Consensus 413 P~~a~~m~~~fl~~~~~ 429 (432)
|++|++||++|+++++|
T Consensus 417 P~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 417 PNETFIMFQRWISGQPL 433 (433)
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 99999999999999875
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-87 Score=685.54 Aligned_cols=347 Identities=40% Similarity=0.718 Sum_probs=288.2
Q ss_pred CCCCCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCCC-CeeecCC
Q 042005 79 PGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDG-KTLYQNE 157 (432)
Q Consensus 79 pg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~~-~~l~~N~ 157 (432)
||++.++++++|||||+|+++.+++||||||||+++|+++||||||||||||||| +|+|.|+|||+++.++ .+++.||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 8888889999999999999777899999999999999999999999999999999 5999999999999543 6899999
Q ss_pred CCCCC-------------CCc--------ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHH
Q 042005 158 YAWNK-------------DYK--------VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILY 216 (432)
Q Consensus 158 ~SW~~-------------~~~--------~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~ 216 (432)
+|||+ +++ ..+++++|+++++||++||++||+++++||||+||||||||||.+|.+|++
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~ 159 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQ 159 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhh
Confidence 99999 111 246789999999999999999999999999999999999999999999999
Q ss_pred hccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhhhcccc-cCCCChHHHHHHHHHHHH-----
Q 042005 217 NNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFA-SLNSSDKVCLEFIDQGDA----- 290 (432)
Q Consensus 217 ~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~-~~~~~~~~C~~~~~~~~~----- 290 (432)
++++...+.||||||+||||++||..|..++.+|++.+|+|++++++++.+.|... ........|..+.+.+..
T Consensus 160 ~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 239 (415)
T PF00450_consen 160 QNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAIS 239 (415)
T ss_dssp HTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHHH
T ss_pred ccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhcccc
Confidence 99764456899999999999999999999999999999999999999999998653 223566789888777664
Q ss_pred -hcCCCcccccCCCcCCC-----CC----CcC-----CCCcCccc---cc-------cccc-------------cCCCCc
Q 042005 291 -AAGNIYSYDIYAPLCNS-----SS----KFN-----TEIANSGE---IN-------RNWK-------------DKPQTV 332 (432)
Q Consensus 291 -~~g~~n~Ydi~~~~c~~-----~~----~~~-----~pYLN~~~---~~-------~~w~-------------d~~~~~ 332 (432)
..+++|+||++.+.|.. .. .+. ..|||+++ .+ ..|. +.+.++
T Consensus 240 ~~~~~~n~Ydi~~~~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~V~~~~~~~d~~~~~ 319 (415)
T PF00450_consen 240 QCNGGINPYDIRQPCYNPSRSSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDAVNFNWLYDDFMPSS 319 (415)
T ss_dssp HHHTTSETTSTTSEETT-SHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HHHHHHCCTCCC-SBC
T ss_pred cccCCcceeeeeccccccccccccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCcccccccccccccccc
Confidence 34799999999863320 00 000 23999987 11 1333 456788
Q ss_pred HHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeee--cCeeeeEEEEecceEEEEEcCCcccccc
Q 042005 333 LPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYT--QGEVGGYAVGYQNLTFVTVRGAGHFVPS 410 (432)
Q Consensus 333 ~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~--~~~~~G~~k~~~nLTf~~V~~AGHmvP~ 410 (432)
.+.++.||++++|||||+||+|++||+.|+++|+++|+|+++++|++|.. +++++||+|+|+||||++|++||||||+
T Consensus 320 ~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~ 399 (415)
T PF00450_consen 320 IPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQ 399 (415)
T ss_dssp HHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHH
T ss_pred hhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChh
Confidence 89999999999999999999999999999999999999999999999987 8999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHcC
Q 042005 411 YQPARALVLFSSFING 426 (432)
Q Consensus 411 dqP~~a~~m~~~fl~~ 426 (432)
|||+++++||++||+|
T Consensus 400 dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 400 DQPEAALQMFRRFLKG 415 (415)
T ss_dssp HSHHHHHHHHHHHHCT
T ss_pred hCHHHHHHHHHHHhcC
Confidence 9999999999999986
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-81 Score=649.02 Aligned_cols=346 Identities=27% Similarity=0.514 Sum_probs=292.0
Q ss_pred CCCCceeEEeeEEecC-CCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCCCCeeecCCCCCC
Q 042005 83 LGVNFDQYSGYVNVDS-QDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWN 161 (432)
Q Consensus 83 ~~~~~~~ysGyl~v~~-~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~~~~l~~N~~SW~ 161 (432)
.+.++++|||||+|++ ..+++||||||||+++|+++||||||||||||||| +|+|+|||||+++.++.++..||||||
T Consensus 41 ~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~ 119 (462)
T PTZ00472 41 CDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWN 119 (462)
T ss_pred cCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCcccc
Confidence 3467899999999975 45789999999999999999999999999999999 599999999999998778999999999
Q ss_pred C---------------CCc-----ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhcccc
Q 042005 162 K---------------DYK-----VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHA 221 (432)
Q Consensus 162 ~---------------~~~-----~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~ 221 (432)
+ +|. ..+++++|+|+++||+.||++||+++.+|+||+||||||+|||.+|.+|+++|+..
T Consensus 120 ~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~ 199 (462)
T PTZ00472 120 NEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKG 199 (462)
T ss_pred cccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhcccc
Confidence 9 221 24567899999999999999999999999999999999999999999999998764
Q ss_pred ccceeeeeeeEeccccccccccchhhHHHHHh-------cCCCCHHHHHhHhh---hcccc--c----CCCChHHHHHHH
Q 042005 222 NQTIINLRGIAMGNALIDLETMMKGTVDFYWT-------HALMPDEIYHGLTS---SYNFA--S----LNSSDKVCLEFI 285 (432)
Q Consensus 222 ~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~-------~glI~~~~~~~~~~---~C~~~--~----~~~~~~~C~~~~ 285 (432)
...+||||||+||||++||..|..++.+|+|. +|+|++++++++.+ .|... . .......|..+.
T Consensus 200 ~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~a~ 279 (462)
T PTZ00472 200 DGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSVAR 279 (462)
T ss_pred CCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHH
Confidence 45789999999999999999999999999996 58999999988764 34321 0 011234465444
Q ss_pred HHHHH-----hcCCCcccccCCCcCCCCCCcC----CCCcCccc---cc----cccc------------cCCCCcHHHHH
Q 042005 286 DQGDA-----AAGNIYSYDIYAPLCNSSSKFN----TEIANSGE---IN----RNWK------------DKPQTVLPIIQ 337 (432)
Q Consensus 286 ~~~~~-----~~g~~n~Ydi~~~~c~~~~~~~----~pYLN~~~---~~----~~w~------------d~~~~~~~~l~ 337 (432)
..|.. ..+++|+|||+.+ |..+.... +.|||+++ .+ ..|. |.+.++.+.++
T Consensus 280 ~~c~~~~~~~~~~g~n~Ydi~~~-c~~~~c~~~~~~~~yLN~~~Vq~AL~v~~~~w~~c~~~V~~~~~~D~~~~~~~~l~ 358 (462)
T PTZ00472 280 ALCNEYIAVYSATGLNNYDIRKP-CIGPLCYNMDNTIAFMNREDVQSSLGVKPATWQSCNMEVNLMFEMDWMKNFNYTVP 358 (462)
T ss_pred HHHHHHHHHHHhcCCChhheecc-CCCCCccCHHHHHHHhCCHHHHHHhCCCCCCceeCCHHHHHHhhhccccchHHHHH
Confidence 33321 1368999999975 75432111 34999998 22 2465 34466778999
Q ss_pred HHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCc-----cceee-eecCeeeeEEEEec-----ceEEEEEcCCcc
Q 042005 338 ELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRT-----AWYPW-YTQGEVGGYAVGYQ-----NLTFVTVRGAGH 406 (432)
Q Consensus 338 ~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~-----~~~~w-~~~~~~~G~~k~~~-----nLTf~~V~~AGH 406 (432)
.||++|+|||||+||.|++||+.|+++|+++|+|++++ +|++| .++++++||+|+|+ ||||++|++|||
T Consensus 359 ~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH 438 (462)
T PTZ00472 359 GLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGH 438 (462)
T ss_pred HHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCc
Confidence 99999999999999999999999999999999999975 56899 56889999999999 999999999999
Q ss_pred cccccChHHHHHHHHHHHcCCCCC
Q 042005 407 FVPSYQPARALVLFSSFINGTLPP 430 (432)
Q Consensus 407 mvP~dqP~~a~~m~~~fl~~~~~~ 430 (432)
|||+|||+++++|+++|+.+++++
T Consensus 439 ~vp~d~P~~~~~~i~~fl~~~~~~ 462 (462)
T PTZ00472 439 MVPMDQPAVALTMINRFLRNRPLS 462 (462)
T ss_pred cChhhHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999874
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-59 Score=465.53 Aligned_cols=262 Identities=27% Similarity=0.531 Sum_probs=222.2
Q ss_pred cCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchh
Q 042005 167 NGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKG 246 (432)
Q Consensus 167 ~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~ 246 (432)
++|+++|+|++.||+.||++||+|+++||||+||||||||||+||++|+++|...+.+.||||||+|||||++|..+..+
T Consensus 25 ~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~~~~~~ 104 (319)
T PLN02213 25 TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNF 104 (319)
T ss_pred cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCccccchh
Confidence 46667789999999999999999999999999999999999999999999886544568999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHhHhhhccccc--CCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCC----Cc-------CC
Q 042005 247 TVDFYWTHALMPDEIYHGLTSSYNFAS--LNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSS----KF-------NT 313 (432)
Q Consensus 247 ~~~~~~~~glI~~~~~~~~~~~C~~~~--~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~----~~-------~~ 313 (432)
+.+|+|.+|+|++++++.+++.|.... ...+...|..++..+....+.+|+||++.+.|.... .+ .+
T Consensus 105 ~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 184 (319)
T PLN02213 105 RIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHHILTPDCDVTNVTSPDCYYYPYHLIE 184 (319)
T ss_pred HhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHhhcccCcccCccCCCCCcccchhHHHH
Confidence 999999999999999999999996422 123457899888877777788999999865564210 01 02
Q ss_pred CCcCccc---cc-------cccccCCC---------CcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCC
Q 042005 314 EIANSGE---IN-------RNWKDKPQ---------TVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVR 374 (432)
Q Consensus 314 pYLN~~~---~~-------~~w~d~~~---------~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~ 374 (432)
.|||+++ .+ ..|..|.. +..+.+..+|.+++|||||+||.|++||+.|+++|+++|+|++.
T Consensus 185 ~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~~~~d~~~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~ 264 (319)
T PLN02213 185 CWANDESVREALHIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPI 264 (319)
T ss_pred HHhCCHHHHHHhCcCCCCCCCCccCCcccccccccccchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCC
Confidence 3999997 12 24764422 23344445555789999999999999999999999999999999
Q ss_pred ccceeeeecCeeeeEEEEecc-eEEEEEcCCcccccccChHHHHHHHHHHHcCCCC
Q 042005 375 TAWYPWYTQGEVGGYAVGYQN-LTFVTVRGAGHFVPSYQPARALVLFSSFINGTLP 429 (432)
Q Consensus 375 ~~~~~w~~~~~~~G~~k~~~n-LTf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~ 429 (432)
++|++|+++++++||+|+|+| |||++|++|||||| +||++|++||++||++++|
T Consensus 265 ~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 265 HNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred CCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 999999999999999999986 99999999999998 6999999999999999875
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-55 Score=442.44 Aligned_cols=333 Identities=26% Similarity=0.425 Sum_probs=261.2
Q ss_pred CceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCCCCeee--cCCCCCCC-
Q 042005 86 NFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLY--QNEYAWNK- 162 (432)
Q Consensus 86 ~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~~~~l~--~N~~SW~~- 162 (432)
++++|+||..+. ..+|||+|+++++|.++|+|+||||||||||+ .|+|.|+||.+|+.+. ++. .||+||++
T Consensus 73 pv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~-~P~~~~NP~SW~~~ 146 (498)
T COG2939 73 PVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGT-SPSYPDNPGSWLDF 146 (498)
T ss_pred chhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCC-CCCCCCCccccccC
Confidence 367888884443 23999999999999999999999999999999 5999999999999883 344 59999999
Q ss_pred ------------CCcc-------cCChhhHHHHHHHHHHHHHHCCCCCCC--CeEEEccccccccchHHHHHHHHhcccc
Q 042005 163 ------------DYKV-------NGDIRTARDSYTFLVSWLARFPEYKTR--DFFIAGESYAGHYIPQLAQAILYNNQHA 221 (432)
Q Consensus 163 ------------~~~~-------~~~~~~a~d~~~fL~~F~~~fP~~~~~--~~yI~GESYaG~yvP~lA~~I~~~n~~~ 221 (432)
+|+. .+-+.+.+|++.|++.||+.||++.+. ++||+||||||+|+|.||..|+++|..
T Consensus 147 adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~- 225 (498)
T COG2939 147 ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA- 225 (498)
T ss_pred CceEEEecCcccCcccccccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc-
Confidence 2322 244578999999999999999999888 999999999999999999999998632
Q ss_pred ccceeeeeeeEeccc-cccccccchhhHHHHHhc----CCCCHHHHHhHhhhccccc-------C--CCChHHHHHHHHH
Q 042005 222 NQTIINLRGIAMGNA-LIDLETMMKGTVDFYWTH----ALMPDEIYHGLTSSYNFAS-------L--NSSDKVCLEFIDQ 287 (432)
Q Consensus 222 ~~~~inLkGi~IGNg-~idp~~~~~~~~~~~~~~----glI~~~~~~~~~~~C~~~~-------~--~~~~~~C~~~~~~ 287 (432)
.+-.+||++++|||| +|||..++..+..++... +..+.+.++.+++.|+... . ......|..+...
T Consensus 226 ~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~ 305 (498)
T COG2939 226 LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAY 305 (498)
T ss_pred cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHH
Confidence 234799999999999 999999999999998854 4566777888888776421 1 1233457666555
Q ss_pred HHHhc------C---CCcccccCCCcCCCCCC---cC------CCCcC-ccc------cccccc---------------c
Q 042005 288 GDAAA------G---NIYSYDIYAPLCNSSSK---FN------TEIAN-SGE------INRNWK---------------D 327 (432)
Q Consensus 288 ~~~~~------g---~~n~Ydi~~~~c~~~~~---~~------~pYLN-~~~------~~~~w~---------------d 327 (432)
+.... . ..|+||++.. |..... +. ..|++ .++ .+.+|. +
T Consensus 306 ~~~~~~~~~~r~~~~~~n~y~~r~~-~~d~g~~~~~y~~~~~~ld~~~~~~~~~~~~~~~d~~~~c~t~a~~~f~~~~~~ 384 (498)
T COG2939 306 LTGLMREYVGRAGGRLLNVYDIREE-CRDPGLGGSCYDTLSTSLDYFNFDPEQEVNDPEVDNISGCTTDAMTDFLTFTGG 384 (498)
T ss_pred HHhcchhhhccccccccccccchhh-cCCCCcccccccceeeccccccccchhccccccccchhccchHHHHhhhhhcCC
Confidence 54322 2 3899999874 754321 11 22555 222 111221 2
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccce-----eeee--cCeeeeEEEEecceEEEE
Q 042005 328 KPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWY-----PWYT--QGEVGGYAVGYQNLTFVT 400 (432)
Q Consensus 328 ~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~-----~w~~--~~~~~G~~k~~~nLTf~~ 400 (432)
..+.....+..++.+++.+++|.||.|.+|++.|++.|..+|+|.+...|. +|.. ..+..|-.++++|+||++
T Consensus 385 ~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r 464 (498)
T COG2939 385 WAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLR 464 (498)
T ss_pred cccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcccccccCCceEEE
Confidence 234555677788888999999999999999999999999999999987553 3433 456777788889999999
Q ss_pred EcCCcccccccChHHHHHHHHHHHcC
Q 042005 401 VRGAGHFVPSYQPARALVLFSSFING 426 (432)
Q Consensus 401 V~~AGHmvP~dqP~~a~~m~~~fl~~ 426 (432)
++.||||||+|+|+.+++|++.|+.+
T Consensus 465 ~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 465 IYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred EecCcceeecCChHHHHHHHHHHHhh
Confidence 99999999999999999999999987
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-55 Score=411.31 Aligned_cols=328 Identities=25% Similarity=0.389 Sum_probs=267.7
Q ss_pred EEeeEEecCCCCceEEEEEEEcCCC-CCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCCCCeeecCCCCCCC------
Q 042005 90 YSGYVNVDSQDGRSLFYYFVESPQN-SSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK------ 162 (432)
Q Consensus 90 ysGyl~v~~~~~~~lFywf~es~~~-p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~------ 162 (432)
-+||++|+. ++|+|||++.+..+ ...+|+.|||+||||.||..+|+|.|+||+..+ +.+|+++|.+
T Consensus 4 ~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adllf 76 (414)
T KOG1283|consen 4 DWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLLF 76 (414)
T ss_pred cccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEEE
Confidence 379999984 69999999998754 378999999999999999999999999999865 6789999999
Q ss_pred ---------------CCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceee
Q 042005 163 ---------------DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIIN 227 (432)
Q Consensus 163 ---------------~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~in 227 (432)
++-+++++++|.|+.+.|+.||..||||+.+||||+-|||||+..+.+|..+.+..+. +..+.|
T Consensus 77 vDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~-G~i~~n 155 (414)
T KOG1283|consen 77 VDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKR-GEIKLN 155 (414)
T ss_pred ecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhc-Cceeec
Confidence 2224688999999999999999999999999999999999999999999999998876 467899
Q ss_pred eeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhh---hcccc-cC---CCChHHHHHHHHHHHHhcCCCccccc
Q 042005 228 LRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTS---SYNFA-SL---NSSDKVCLEFIDQGDAAAGNIYSYDI 300 (432)
Q Consensus 228 LkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~---~C~~~-~~---~~~~~~C~~~~~~~~~~~g~~n~Ydi 300 (432)
+.||++|++||+|..-..+..+|+++.+++|+...+...+ .|... +. ..+..........+...+.+++.|||
T Consensus 156 f~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYNi 235 (414)
T KOG1283|consen 156 FIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYNI 235 (414)
T ss_pred ceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceeee
Confidence 9999999999999999999999999999999988876543 34321 10 11211112223344456678999999
Q ss_pred CCCcCCCCCCcC---------------------------CCCcCccc-----cc---cccc------------cCCCCcH
Q 042005 301 YAPLCNSSSKFN---------------------------TEIANSGE-----IN---RNWK------------DKPQTVL 333 (432)
Q Consensus 301 ~~~~c~~~~~~~---------------------------~pYLN~~~-----~~---~~w~------------d~~~~~~ 333 (432)
..++-.++...+ +.+||-+- .+ ..|. |+++++.
T Consensus 236 l~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~vrkkLgIip~~~~wGgqsg~vFt~lq~dFMKPvi 315 (414)
T KOG1283|consen 236 LTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGPVRKKLGIIPGGVKWGGQSGDVFTKLQGDFMKPVI 315 (414)
T ss_pred eccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhcccccccccccCCCCcccCcCCchHHHhhhhhcccHH
Confidence 876544332110 01444432 11 2343 7789999
Q ss_pred HHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccce--ee---eecCeeeeEEEEecceEEEEEcCCcccc
Q 042005 334 PIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWY--PW---YTQGEVGGYAVGYQNLTFVTVRGAGHFV 408 (432)
Q Consensus 334 ~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~--~w---~~~~~~~G~~k~~~nLTf~~V~~AGHmv 408 (432)
..+.+||++|++|.||+|++|.||++.|+++|+.+|+|++...++ +| +++-..+||.|+|+||.|..|..|||||
T Consensus 316 ~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~wilraghmv 395 (414)
T KOG1283|consen 316 SKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFFWILRAGHMV 395 (414)
T ss_pred HHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeEEeecccCcc
Confidence 999999999999999999999999999999999999999987543 33 4466789999999999999999999999
Q ss_pred cccChHHHHHHHHHHHc
Q 042005 409 PSYQPARALVLFSSFIN 425 (432)
Q Consensus 409 P~dqP~~a~~m~~~fl~ 425 (432)
|.|+|+.|.+|++.+.+
T Consensus 396 p~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 396 PADNPAAASHMLRHVTK 412 (414)
T ss_pred cCCCHHHHhhheeeccc
Confidence 99999999999987653
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.6e-06 Score=82.44 Aligned_cols=63 Identities=17% Similarity=0.215 Sum_probs=49.0
Q ss_pred HHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHH
Q 042005 338 ELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARAL 417 (432)
Q Consensus 338 ~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~ 417 (432)
.+.+-.++||+.+|+.|.+ +....+.+.+.+. +.+++.+.++||+++.++|++..
T Consensus 226 ~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~ 280 (288)
T TIGR01250 226 KLSEIKVPTLLTVGEFDTM-TPEAAREMQELIA------------------------GSRLVVFPDGSHMTMIEDPEVYF 280 (288)
T ss_pred HhhccCCCEEEEecCCCcc-CHHHHHHHHHhcc------------------------CCeEEEeCCCCCCcccCCHHHHH
Confidence 3334468999999999985 4455555555432 34678899999999999999999
Q ss_pred HHHHHHHc
Q 042005 418 VLFSSFIN 425 (432)
Q Consensus 418 ~m~~~fl~ 425 (432)
+.+.+|++
T Consensus 281 ~~i~~fl~ 288 (288)
T TIGR01250 281 KLLSDFIR 288 (288)
T ss_pred HHHHHHhC
Confidence 99999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.4e-06 Score=80.77 Aligned_cols=69 Identities=20% Similarity=0.147 Sum_probs=52.3
Q ss_pred HHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHH
Q 042005 338 ELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARAL 417 (432)
Q Consensus 338 ~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~ 417 (432)
.+-+-.++|||..|+.|.+++... +.+.+.+. .-.+..+..+.++||+++.++|+...
T Consensus 234 ~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~---------------------~~~~~~~~~i~~~gH~~~~e~p~~~~ 291 (302)
T PRK00870 234 VLERWDKPFLTAFSDSDPITGGGD-AILQKRIP---------------------GAAGQPHPTIKGAGHFLQEDSGEELA 291 (302)
T ss_pred hhhcCCCceEEEecCCCCcccCch-HHHHhhcc---------------------cccccceeeecCCCccchhhChHHHH
Confidence 344457999999999999999754 44433332 01134567899999999999999999
Q ss_pred HHHHHHHcCCC
Q 042005 418 VLFSSFINGTL 428 (432)
Q Consensus 418 ~m~~~fl~~~~ 428 (432)
+.+.+|+...|
T Consensus 292 ~~l~~fl~~~~ 302 (302)
T PRK00870 292 EAVLEFIRATP 302 (302)
T ss_pred HHHHHHHhcCC
Confidence 99999997654
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.6e-05 Score=75.11 Aligned_cols=60 Identities=13% Similarity=0.130 Sum_probs=51.7
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+||+..|..|.+++..-.+.+.+.+. +..++.|.+|||+++.++|+...+++.
T Consensus 222 i~~Pvlli~G~~D~~v~~~~~~~~~~~~~------------------------~~~~~~i~~agH~~~~e~p~~~~~~i~ 277 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLDHGLKLLWNMP------------------------DAQLHVFSRCGHWAQWEHADAFNRLVI 277 (282)
T ss_pred CCCCEEEEEccCCCcCCchhHHHHHHhCC------------------------CCEEEEeCCCCcCCcccCHHHHHHHHH
Confidence 35899999999999999866666665543 667889999999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 278 ~fl~ 281 (282)
T TIGR03343 278 DFLR 281 (282)
T ss_pred HHhh
Confidence 9985
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=98.52 E-value=8.6e-06 Score=76.30 Aligned_cols=59 Identities=15% Similarity=0.128 Sum_probs=50.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.+||....+.+.+.+. +..+..+.++||+.+.++|+...+.+.+
T Consensus 198 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 253 (257)
T TIGR03611 198 QHPVLLIANRDDMLVPYTQSLRLAAALP------------------------NAQLKLLPYGGHASNVTDPETFNRALLD 253 (257)
T ss_pred CccEEEEecCcCcccCHHHHHHHHHhcC------------------------CceEEEECCCCCCccccCHHHHHHHHHH
Confidence 5899999999999999887777665542 4567889999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 254 fl~ 256 (257)
T TIGR03611 254 FLK 256 (257)
T ss_pred Hhc
Confidence 985
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=7.2e-05 Score=72.07 Aligned_cols=63 Identities=14% Similarity=0.162 Sum_probs=51.6
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChH---HHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPA---RALV 418 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~---~a~~ 418 (432)
-..+|||.+|+.|.+||....+.+.+.+. .+-++.++.+|||++..++|+ ++++
T Consensus 208 i~~Pvliv~G~~D~i~~~~~~~~l~~~~~-----------------------~~~~~~~~~~~gH~~~~e~~~~~~~~~~ 264 (276)
T PHA02857 208 IKTPILILQGTNNEISDVSGAYYFMQHAN-----------------------CNREIKIYEGAKHHLHKETDEVKKSVMK 264 (276)
T ss_pred CCCCEEEEecCCCCcCChHHHHHHHHHcc-----------------------CCceEEEeCCCcccccCCchhHHHHHHH
Confidence 35899999999999999999988888753 134778999999999999884 4666
Q ss_pred HHHHHHcCC
Q 042005 419 LFSSFINGT 427 (432)
Q Consensus 419 m~~~fl~~~ 427 (432)
-+.+||.+.
T Consensus 265 ~~~~~l~~~ 273 (276)
T PHA02857 265 EIETWIFNR 273 (276)
T ss_pred HHHHHHHHh
Confidence 677788653
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.2e-05 Score=72.70 Aligned_cols=60 Identities=25% Similarity=0.385 Sum_probs=50.7
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+|++.+|+.|.++|....+.+.+.+. +.++..+.++||+++.++|+...+.++
T Consensus 192 ~~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i~ 247 (251)
T TIGR02427 192 IAVPTLCIAGDQDGSTPPELVREIADLVP------------------------GARFAEIRGAGHIPCVEQPEAFNAALR 247 (251)
T ss_pred cCCCeEEEEeccCCcCChHHHHHHHHhCC------------------------CceEEEECCCCCcccccChHHHHHHHH
Confidence 35899999999999999876666655532 456789999999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
.|+.
T Consensus 248 ~fl~ 251 (251)
T TIGR02427 248 DFLR 251 (251)
T ss_pred HHhC
Confidence 9973
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=98.34 E-value=5.6e-05 Score=73.68 Aligned_cols=60 Identities=22% Similarity=0.290 Sum_probs=50.0
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||.+|..|.++|....+. +.++. .+.+++.+.+|||+++.++|++..+.+.+
T Consensus 234 ~~P~lvi~G~~D~~~~~~~~~~-~~~~~-----------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 289 (294)
T PLN02824 234 KCPVLIAWGEKDPWEPVELGRA-YANFD-----------------------AVEDFIVLPGVGHCPQDEAPELVNPLIES 289 (294)
T ss_pred CCCeEEEEecCCCCCChHHHHH-HHhcC-----------------------CccceEEeCCCCCChhhhCHHHHHHHHHH
Confidence 5899999999999999876655 43322 23567899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+.+
T Consensus 290 fl~~ 293 (294)
T PLN02824 290 FVAR 293 (294)
T ss_pred HHhc
Confidence 9964
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.6e-05 Score=74.37 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=48.4
Q ss_pred CCeEEEEecCCccccCchhH-HHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCT-RYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt-~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
..+|||..|+.|.+++.... +.+.+.+ .+.++.++.+|||+++.++|+...+++.
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~i------------------------p~~~~~~i~~aGH~~~~e~Pe~~~~~i~ 282 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATF------------------------PDHVLVELPNAKHFIQEDAPDRIAAAII 282 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhc------------------------CCCeEEEcCCCcccccccCHHHHHHHHH
Confidence 59999999999998876543 3333443 4678899999999999999999999999
Q ss_pred HHH
Q 042005 422 SFI 424 (432)
Q Consensus 422 ~fl 424 (432)
+|+
T Consensus 283 ~~~ 285 (286)
T PRK03204 283 ERF 285 (286)
T ss_pred Hhc
Confidence 997
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.2e-05 Score=72.37 Aligned_cols=59 Identities=24% Similarity=0.345 Sum_probs=50.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||.+|+.|.++|....+.+.+.+. +..++.+.++||+++.++|+...+.+.+
T Consensus 220 ~~P~lii~g~~D~~vp~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 275 (278)
T TIGR03056 220 TIPLHLIAGEEDKAVPPDESKRAATRVP------------------------TATLHVVPGGGHLVHEEQADGVVGLILQ 275 (278)
T ss_pred CCCEEEEEeCCCcccCHHHHHHHHHhcc------------------------CCeEEEECCCCCcccccCHHHHHHHHHH
Confidence 5899999999999999877777766543 4456888999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|++
T Consensus 276 f~~ 278 (278)
T TIGR03056 276 AAE 278 (278)
T ss_pred HhC
Confidence 984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=0.00015 Score=68.65 Aligned_cols=60 Identities=15% Similarity=0.236 Sum_probs=50.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+..|+.|..++....+.+.+.+ .+.++.++.++||+.+.++|+...+.+.+
T Consensus 195 ~~P~l~i~G~~D~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~~~~p~~~~~~l~~ 250 (255)
T PRK10673 195 PHPALFIRGGNSPYVTEAYRDDLLAQF------------------------PQARAHVIAGAGHWVHAEKPDAVLRAIRR 250 (255)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhC------------------------CCcEEEEeCCCCCeeeccCHHHHHHHHHH
Confidence 479999999999988876555555443 36788999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 251 fl~~ 254 (255)
T PRK10673 251 YLND 254 (255)
T ss_pred HHhc
Confidence 9964
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.00032 Score=70.45 Aligned_cols=63 Identities=13% Similarity=0.221 Sum_probs=52.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHH----HHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPAR----ALV 418 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~----a~~ 418 (432)
.++|||.+|+.|.+++....+.+.+++. ..+-++..+.++||++..++|++ +++
T Consensus 279 ~~P~Lii~G~~D~vv~~~~~~~l~~~~~----------------------~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~ 336 (349)
T PLN02385 279 SLPLLILHGEADKVTDPSVSKFLYEKAS----------------------SSDKKLKLYEDAYHSILEGEPDEMIFQVLD 336 (349)
T ss_pred CCCEEEEEeCCCCccChHHHHHHHHHcC----------------------CCCceEEEeCCCeeecccCCChhhHHHHHH
Confidence 5899999999999999988887777653 12457788999999999999987 788
Q ss_pred HHHHHHcCC
Q 042005 419 LFSSFINGT 427 (432)
Q Consensus 419 m~~~fl~~~ 427 (432)
.+.+|+...
T Consensus 337 ~i~~wL~~~ 345 (349)
T PLN02385 337 DIISWLDSH 345 (349)
T ss_pred HHHHHHHHh
Confidence 888998654
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.8e-05 Score=85.76 Aligned_cols=233 Identities=16% Similarity=0.219 Sum_probs=131.8
Q ss_pred EEecCCCCceEEEEEEEcCC-CCC-CCCeEEEEcCCCChhhhhHh--hhhhcCCeEEcCCC-CeeecCCCCCCC---CCc
Q 042005 94 VNVDSQDGRSLFYYFVESPQ-NSS-SKPLVLWLNGGPGFSSFGAG--TMMELGPFRVNKDG-KTLYQNEYAWNK---DYK 165 (432)
Q Consensus 94 l~v~~~~~~~lFywf~es~~-~p~-~~PlilWlnGGPGcSSl~~G--~f~E~GP~~~~~~~-~~l~~N~~SW~~---~~~ 165 (432)
+.+....+..+..|++.-.+ ++. +-|+|+++-||| +++ .| ...|.=++.- .| ..+.+|+-.=+- ++.
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~~~~~~~q~~~~--~G~~V~~~n~RGS~GyG~~F~ 442 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGYSFNPEIQVLAS--AGYAVLAPNYRGSTGYGREFA 442 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-cccccchhhHHHhc--CCeEEEEeCCCCCCccHHHHH
Confidence 34433346789999987654 333 359999999999 555 34 2222211111 11 123334332211 000
Q ss_pred c----cCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 166 V----NGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 166 ~----~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
. .--....+|+.+++. |++..|..-...+.|+|.|||| +++..++.+.. .+|..+...|.++..
T Consensus 443 ~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGG----ymtl~~~~~~~-------~f~a~~~~~~~~~~~ 510 (620)
T COG1506 443 DAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGG----YMTLLAATKTP-------RFKAAVAVAGGVDWL 510 (620)
T ss_pred HhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHH----HHHHHHHhcCc-------hhheEEeccCcchhh
Confidence 0 011256778888898 9999998888889999999999 88888877642 467777666666654
Q ss_pred ccchhhHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCcccc
Q 042005 242 TMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEI 321 (432)
Q Consensus 242 ~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~ 321 (432)
..... +. ...+...++.... .. . ....|--+.+
T Consensus 511 ~~~~~-----~~-----~~~~~~~~~~~~~----~~-~--------------~~~~~~~~sp------------------ 543 (620)
T COG1506 511 LYFGE-----ST-----EGLRFDPEENGGG----PP-E--------------DREKYEDRSP------------------ 543 (620)
T ss_pred hhccc-----cc-----hhhcCCHHHhCCC----cc-c--------------ChHHHHhcCh------------------
Confidence 32210 00 0000001110000 00 0 0000000000
Q ss_pred ccccccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEE
Q 042005 322 NRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTV 401 (432)
Q Consensus 322 ~~~w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V 401 (432)
..... +-..++||.||..|..|+..-++++.+.|+-.|. +..+++.
T Consensus 544 -----------~~~~~---~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~--------------------~~~~~~~ 589 (620)
T COG1506 544 -----------IFYAD---NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGK--------------------PVELVVF 589 (620)
T ss_pred -----------hhhhc---ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCc--------------------eEEEEEe
Confidence 01111 1136999999999999999999999999973222 4667899
Q ss_pred cCCcccccc-cChHHHHHHHHHHH
Q 042005 402 RGAGHFVPS-YQPARALVLFSSFI 424 (432)
Q Consensus 402 ~~AGHmvP~-dqP~~a~~m~~~fl 424 (432)
++.||-... ..-...++-+.+|+
T Consensus 590 p~e~H~~~~~~~~~~~~~~~~~~~ 613 (620)
T COG1506 590 PDEGHGFSRPENRVKVLKEILDWF 613 (620)
T ss_pred CCCCcCCCCchhHHHHHHHHHHHH
Confidence 999999987 22333444444454
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00019 Score=69.96 Aligned_cols=64 Identities=9% Similarity=0.125 Sum_probs=52.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||.+|+.|.+++.....+++..+. .+.++..+.+|||+++.++|++..+.+..
T Consensus 228 ~~P~lii~G~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~~~gH~~~~e~p~~v~~~i~~ 284 (295)
T PRK03592 228 DVPKLLINAEPGAILTTGAIRDWCRSWP-----------------------NQLEITVFGAGLHFAQEDSPEEIGAAIAA 284 (295)
T ss_pred CCCeEEEeccCCcccCcHHHHHHHHHhh-----------------------hhcceeeccCcchhhhhcCHHHHHHHHHH
Confidence 5899999999999996666666665432 34567888999999999999999999999
Q ss_pred HHcCCCC
Q 042005 423 FINGTLP 429 (432)
Q Consensus 423 fl~~~~~ 429 (432)
|+.+...
T Consensus 285 fl~~~~~ 291 (295)
T PRK03592 285 WLRRLRL 291 (295)
T ss_pred HHHHhcc
Confidence 9976554
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00073 Score=67.10 Aligned_cols=63 Identities=17% Similarity=0.140 Sum_probs=51.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHH----HHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPAR----ALV 418 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~----a~~ 418 (432)
.++|||.+|+.|.++|....+.+.+.+.. .+-++..+.++||++..++|+. +.+
T Consensus 251 ~~PvLii~G~~D~ivp~~~~~~l~~~i~~----------------------~~~~l~~~~~a~H~~~~e~pd~~~~~~~~ 308 (330)
T PLN02298 251 SIPFIVLHGSADVVTDPDVSRALYEEAKS----------------------EDKTIKIYDGMMHSLLFGEPDENIEIVRR 308 (330)
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHhcc----------------------CCceEEEcCCcEeeeecCCCHHHHHHHHH
Confidence 58999999999999999998888877641 2447788999999999999854 566
Q ss_pred HHHHHHcCC
Q 042005 419 LFSSFINGT 427 (432)
Q Consensus 419 m~~~fl~~~ 427 (432)
.+.+|+...
T Consensus 309 ~i~~fl~~~ 317 (330)
T PLN02298 309 DILSWLNER 317 (330)
T ss_pred HHHHHHHHh
Confidence 677787653
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=98.04 E-value=7.2e-05 Score=67.91 Aligned_cols=53 Identities=28% Similarity=0.419 Sum_probs=42.2
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALV 418 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~ 418 (432)
-+.+|++..|+.|.+++..-.+.+.+.+ ++..++++.++||+++.++|++..+
T Consensus 175 ~~~pvl~i~g~~D~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 175 IKVPVLVIHGEDDPIVPPESAEELADKL------------------------PNAELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp SSSEEEEEEETTSSSSHHHHHHHHHHHS------------------------TTEEEEEETTSSSTHHHHSHHHHHH
T ss_pred cCCCeEEeecCCCCCCCHHHHHHHHHHC------------------------CCCEEEEECCCCCccHHHCHHHHhc
Confidence 3699999999999999955555554443 3567899999999999999987643
|
... |
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00037 Score=71.40 Aligned_cols=62 Identities=8% Similarity=0.005 Sum_probs=51.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccccc-ChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSY-QPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~d-qP~~a~~m~~ 421 (432)
++++||.+|+.|.++|...++.+.+++.= ..-++..+.+++|++..+ .|+.+++.+.
T Consensus 324 ~vPvLIi~G~~D~vvp~~~a~~l~~~~~~----------------------~~k~l~~~~ga~H~l~~e~~~e~v~~~I~ 381 (395)
T PLN02652 324 TVPFMVLHGTADRVTDPLASQDLYNEAAS----------------------RHKDIKLYDGFLHDLLFEPEREEVGRDII 381 (395)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhcCC----------------------CCceEEEECCCeEEeccCCCHHHHHHHHH
Confidence 69999999999999999999999887530 112446789999999776 7999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
.|+.+
T Consensus 382 ~FL~~ 386 (395)
T PLN02652 382 DWMEK 386 (395)
T ss_pred HHHHH
Confidence 99864
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.0013 Score=67.51 Aligned_cols=59 Identities=17% Similarity=0.044 Sum_probs=44.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|++..|+.|.+++ ...+.+.+.++ .+..++.|.+|||+++.|+|+...+++.+
T Consensus 325 ~vP~liI~G~~D~i~~-~~~~~~~~~~~-----------------------~~~~~~~i~~aGH~~~~E~P~~f~~~l~~ 380 (402)
T PLN02894 325 KVPTTFIYGRHDWMNY-EGAVEARKRMK-----------------------VPCEIIRVPQGGHFVFLDNPSGFHSAVLY 380 (402)
T ss_pred CCCEEEEEeCCCCCCc-HHHHHHHHHcC-----------------------CCCcEEEeCCCCCeeeccCHHHHHHHHHH
Confidence 5899999999998876 33444444432 12457899999999999999998888877
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 381 ~~~ 383 (402)
T PLN02894 381 ACR 383 (402)
T ss_pred HHH
Confidence 764
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00067 Score=68.57 Aligned_cols=65 Identities=20% Similarity=0.251 Sum_probs=51.6
Q ss_pred CCeEEEEecCCccccCchhH-HHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCT-RYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt-~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
.++|||..|+.|.++|..+. ..+++.|. +...+.++.+|.+|||+++.++|++..+.+.
T Consensus 292 ~~PtLii~G~~D~~~p~~~~~~~~~~~l~--------------------~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~ 351 (360)
T PLN02679 292 SLPILVLWGDQDPFTPLDGPVGKYFSSLP--------------------SQLPNVTLYVLEGVGHCPHDDRPDLVHEKLL 351 (360)
T ss_pred CCCEEEEEeCCCCCcCchhhHHHHHHhhh--------------------ccCCceEEEEcCCCCCCccccCHHHHHHHHH
Confidence 58999999999999998653 23444432 1224678899999999999999999999999
Q ss_pred HHHcCC
Q 042005 422 SFINGT 427 (432)
Q Consensus 422 ~fl~~~ 427 (432)
+|+...
T Consensus 352 ~FL~~~ 357 (360)
T PLN02679 352 PWLAQL 357 (360)
T ss_pred HHHHhc
Confidence 999653
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00022 Score=66.98 Aligned_cols=54 Identities=15% Similarity=0.255 Sum_probs=43.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|++..|+.|.++.. ...+ .+.+++.|.++||+++.++|++..+.|..
T Consensus 188 ~~P~lii~G~~D~~~~~-----~~~~-------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 237 (242)
T PRK11126 188 TFPFYYLCGERDSKFQA-----LAQQ-------------------------LALPLHVIPNAGHNAHRENPAAFAASLAQ 237 (242)
T ss_pred CCCeEEEEeCCcchHHH-----HHHH-------------------------hcCeEEEeCCCCCchhhhChHHHHHHHHH
Confidence 68999999999975421 1111 14578999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 238 fl~~ 241 (242)
T PRK11126 238 ILRL 241 (242)
T ss_pred HHhh
Confidence 9853
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00079 Score=65.93 Aligned_cols=264 Identities=18% Similarity=0.179 Sum_probs=137.7
Q ss_pred eeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhh---hHhhhhhcCCeEEc-C--CCCeeecCCCCCC
Q 042005 88 DQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSF---GAGTMMELGPFRVN-K--DGKTLYQNEYAWN 161 (432)
Q Consensus 88 ~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl---~~G~f~E~GP~~~~-~--~~~~l~~N~~SW~ 161 (432)
....+|++++ + +++++.|. -+++.|+|+.|-|=|=.+=. .+..|.--| +++- . .|...+..|-.-
T Consensus 21 ~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wyswr~q~~~la~~~-~rviA~DlrGyG~Sd~P~~~- 91 (322)
T KOG4178|consen 21 AISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYSWRHQIPGLASRG-YRVIAPDLRGYGFSDAPPHI- 91 (322)
T ss_pred hcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchhhhhhhhhhhhcc-eEEEecCCCCCCCCCCCCCc-
Confidence 4557888875 2 88888887 67899999999998855432 124455556 6653 2 232233333110
Q ss_pred CCCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 162 KDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 162 ~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
...+-...+.|+..+|. . +......+.|++||+. +|-++...-...-+--+++++... ||..+|.
T Consensus 92 ---~~Yt~~~l~~di~~lld----~---Lg~~k~~lvgHDwGai----vaw~la~~~Perv~~lv~~nv~~~-~p~~~~~ 156 (322)
T KOG4178|consen 92 ---SEYTIDELVGDIVALLD----H---LGLKKAFLVGHDWGAI----VAWRLALFYPERVDGLVTLNVPFP-NPKLKPL 156 (322)
T ss_pred ---ceeeHHHHHHHHHHHHH----H---hccceeEEEeccchhH----HHHHHHHhChhhcceEEEecCCCC-Ccccchh
Confidence 11233455555555444 2 3356899999999995 555554443221112344444444 6666665
Q ss_pred ccch-----hhHHHHHhcCCCCHHHHHh----HhhhcccccC--------C-CChHHHHHHHHHHHH---------hcCC
Q 042005 242 TMMK-----GTVDFYWTHALMPDEIYHG----LTSSYNFASL--------N-SSDKVCLEFIDQGDA---------AAGN 294 (432)
Q Consensus 242 ~~~~-----~~~~~~~~~glI~~~~~~~----~~~~C~~~~~--------~-~~~~~C~~~~~~~~~---------~~g~ 294 (432)
.... ++..+.++.....+..+.. +...|..... . .....|-...+.+.. .+|.
T Consensus 157 ~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gp 236 (322)
T KOG4178|consen 157 DSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGP 236 (322)
T ss_pred hhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccccccccc
Confidence 4332 2222333333333332211 1122322110 0 000112111111110 0122
Q ss_pred CcccccCCCcCCCCCCcCCCCcCccccc-cccccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCC
Q 042005 295 IYSYDIYAPLCNSSSKFNTEIANSGEIN-RNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPV 373 (432)
Q Consensus 295 ~n~Ydi~~~~c~~~~~~~~pYLN~~~~~-~~w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~ 373 (432)
+|.| ..+ .+|. . .+ ..+.+-.++|+++.|++|.++++..-....+.
T Consensus 237 lNyy---------------------rn~~r~w~-a----~~--~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk----- 283 (322)
T KOG4178|consen 237 LNYY---------------------RNFRRNWE-A----AP--WALAKITIPVLFIWGDLDPVLPYPIFGELYRK----- 283 (322)
T ss_pred chhh---------------------HHHhhCch-h----cc--ccccccccceEEEEecCcccccchhHHHHHHH-----
Confidence 2222 111 2331 0 00 01222248999999999999999833333322
Q ss_pred CccceeeeecCeeeeEEEEecce-EEEEEcCCcccccccChHHHHHHHHHHHcC
Q 042005 374 RTAWYPWYTQGEVGGYAVGYQNL-TFVTVRGAGHFVPSYQPARALVLFSSFING 426 (432)
Q Consensus 374 ~~~~~~w~~~~~~~G~~k~~~nL-Tf~~V~~AGHmvP~dqP~~a~~m~~~fl~~ 426 (432)
...++ .-+++.++||.+++++|++..+++..|++.
T Consensus 284 ------------------~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 284 ------------------DVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINS 319 (322)
T ss_pred ------------------hhccccceEEecCCcccccccCHHHHHHHHHHHHHh
Confidence 12333 447889999999999999999999999964
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00042 Score=66.87 Aligned_cols=60 Identities=17% Similarity=0.280 Sum_probs=49.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||..|+.|.++|....++..+.+ .+.+++.+. +|||.+.++|+...+.+.+
T Consensus 207 ~~P~lii~G~~D~~v~~~~~~~l~~~~------------------------~~~~~~~i~-~gH~~~~e~p~~~~~~i~~ 261 (276)
T TIGR02240 207 QQPTLVLAGDDDPIIPLINMRLLAWRI------------------------PNAELHIID-DGHLFLITRAEAVAPIIMK 261 (276)
T ss_pred CCCEEEEEeCCCCcCCHHHHHHHHHhC------------------------CCCEEEEEc-CCCchhhccHHHHHHHHHH
Confidence 589999999999999987766665553 245666775 5999999999999999999
Q ss_pred HHcCC
Q 042005 423 FINGT 427 (432)
Q Consensus 423 fl~~~ 427 (432)
|+.+.
T Consensus 262 fl~~~ 266 (276)
T TIGR02240 262 FLAEE 266 (276)
T ss_pred HHHHh
Confidence 99753
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00091 Score=67.12 Aligned_cols=59 Identities=22% Similarity=0.347 Sum_probs=47.7
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
+-.++||+.+|+.|.++|.... +.+ +++.++..+.++||+...++|+...+.|
T Consensus 312 ~i~~Pvlii~g~~D~~vp~~~~----~~l-----------------------~~~~~~~~~~~~gH~~~~e~p~~~~~~i 364 (371)
T PRK14875 312 SLAIPVLVIWGEQDRIIPAAHA----QGL-----------------------PDGVAVHVLPGAGHMPQMEAAADVNRLL 364 (371)
T ss_pred cCCCCEEEEEECCCCccCHHHH----hhc-----------------------cCCCeEEEeCCCCCChhhhCHHHHHHHH
Confidence 3368999999999999986432 111 1356778999999999999999999999
Q ss_pred HHHHcC
Q 042005 421 SSFING 426 (432)
Q Consensus 421 ~~fl~~ 426 (432)
.+|+.+
T Consensus 365 ~~fl~~ 370 (371)
T PRK14875 365 AEFLGK 370 (371)
T ss_pred HHHhcc
Confidence 999965
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0018 Score=59.63 Aligned_cols=59 Identities=22% Similarity=0.312 Sum_probs=44.6
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+||+.+|..|..++-. .+.+.+. .++.+++++.++||+++.++|+...+.|.
T Consensus 193 ~~~P~l~i~g~~D~~~~~~-~~~~~~~------------------------~~~~~~~~~~~~gH~~~~e~~~~~~~~i~ 247 (251)
T TIGR03695 193 LTIPVLYLCGEKDEKFVQI-AKEMQKL------------------------LPNLTLVIIANAGHNIHLENPEAFAKILL 247 (251)
T ss_pred CCCceEEEeeCcchHHHHH-HHHHHhc------------------------CCCCcEEEEcCCCCCcCccChHHHHHHHH
Confidence 3589999999999765321 1222111 23567889999999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|++
T Consensus 248 ~~l~ 251 (251)
T TIGR03695 248 AFLE 251 (251)
T ss_pred HHhC
Confidence 9984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0019 Score=65.12 Aligned_cols=59 Identities=15% Similarity=0.149 Sum_probs=48.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+.+|+.|.+++....+++.+.+ .+..++.+ ++||+.+.++|++..+.|.+
T Consensus 296 ~~PvLiI~G~~D~~v~~~~~~~l~~~~------------------------p~a~l~~i-~~GH~~~~e~p~~~~~~I~~ 350 (354)
T PLN02578 296 SCPLLLLWGDLDPWVGPAKAEKIKAFY------------------------PDTTLVNL-QAGHCPHDEVPEQVNKALLE 350 (354)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhC------------------------CCCEEEEe-CCCCCccccCHHHHHHHHHH
Confidence 589999999999999887666655443 24456667 79999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+.+
T Consensus 351 fl~~ 354 (354)
T PLN02578 351 WLSS 354 (354)
T ss_pred HHhC
Confidence 9853
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0048 Score=61.48 Aligned_cols=68 Identities=12% Similarity=0.091 Sum_probs=51.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh---HHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP---ARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP---~~a~~m 419 (432)
.++|||.+|+.|.+++..+++.+.+.++=. |. ...+.+++.+.||||++..++| +.+++-
T Consensus 259 ~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~---------------~~--~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~ 321 (330)
T PRK10749 259 TTPLLLLQAEEERVVDNRMHDRFCEARTAA---------------GH--PCEGGKPLVIKGAYHEILFEKDAMRSVALNA 321 (330)
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHHHhhc---------------CC--CCCCceEEEeCCCcchhhhCCcHHHHHHHHH
Confidence 589999999999999999988888776410 10 0124567899999999999887 456666
Q ss_pred HHHHHcCC
Q 042005 420 FSSFINGT 427 (432)
Q Consensus 420 ~~~fl~~~ 427 (432)
+..|+...
T Consensus 322 i~~fl~~~ 329 (330)
T PRK10749 322 IVDFFNRH 329 (330)
T ss_pred HHHHHhhc
Confidence 77787653
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0038 Score=65.42 Aligned_cols=67 Identities=10% Similarity=0.165 Sum_probs=54.7
Q ss_pred HHHHHH-cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc-cCh
Q 042005 336 IQELMA-EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS-YQP 413 (432)
Q Consensus 336 l~~LL~-~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~-dqP 413 (432)
+..+++ -.++|||.+|+.|.++|....+...+.+. +-.++.+.+|||+.+. ++|
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP------------------------~a~l~vI~~aGH~~~v~e~p 465 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP------------------------RARVKVIDDKDHITIVVGRQ 465 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC------------------------CCEEEEeCCCCCcchhhcCH
Confidence 444553 36899999999999999988777666653 4567899999999996 999
Q ss_pred HHHHHHHHHHHcC
Q 042005 414 ARALVLFSSFING 426 (432)
Q Consensus 414 ~~a~~m~~~fl~~ 426 (432)
+...+.++.|...
T Consensus 466 ~~fa~~L~~F~~~ 478 (481)
T PLN03087 466 KEFARELEEIWRR 478 (481)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999999854
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0017 Score=66.29 Aligned_cols=58 Identities=19% Similarity=0.071 Sum_probs=49.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||..|+.|.+++....+.+.+.. +.++++|.+|||+++.++|++..+.|.+
T Consensus 325 ~vPvLiI~G~~D~~v~~~~~~~~a~~~-------------------------~a~l~vIp~aGH~~~~E~Pe~v~~~I~~ 379 (383)
T PLN03084 325 KTPITVCWGLRDRWLNYDGVEDFCKSS-------------------------QHKLIELPMAGHHVQEDCGEELGGIISG 379 (383)
T ss_pred CCCEEEEeeCCCCCcCHHHHHHHHHhc-------------------------CCeEEEECCCCCCcchhCHHHHHHHHHH
Confidence 589999999999999887766655532 3467899999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 380 Fl~ 382 (383)
T PLN03084 380 ILS 382 (383)
T ss_pred Hhh
Confidence 985
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0032 Score=75.45 Aligned_cols=74 Identities=14% Similarity=0.207 Sum_probs=51.0
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeE-EEEecceEEEEEcCCcccccccChHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGY-AVGYQNLTFVTVRGAGHFVPSYQPARALVL 419 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~-~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m 419 (432)
+-..++|+..|+.|.+++ ...+++.+.+. +...+. -...++..++.|.+|||+++.++|+...+.
T Consensus 1566 ~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~-------------~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~ 1631 (1655)
T PLN02980 1566 QCDTPLLLVVGEKDVKFK-QIAQKMYREIG-------------KSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRA 1631 (1655)
T ss_pred hCCCCEEEEEECCCCccH-HHHHHHHHHcc-------------ccccccccccccceEEEEECCCCCchHHHCHHHHHHH
Confidence 335899999999999875 33344444442 000000 001223578999999999999999999999
Q ss_pred HHHHHcCCC
Q 042005 420 FSSFINGTL 428 (432)
Q Consensus 420 ~~~fl~~~~ 428 (432)
+.+|+.+..
T Consensus 1632 I~~FL~~~~ 1640 (1655)
T PLN02980 1632 LRKFLTRLH 1640 (1655)
T ss_pred HHHHHHhcc
Confidence 999997644
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.017 Score=56.72 Aligned_cols=43 Identities=19% Similarity=0.218 Sum_probs=35.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccc
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVP 409 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP 409 (432)
.+++||.+|+.|.+||....+.+.+++. +..++++.++||+..
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP------------------------EAELKVTNNAGHSAF 290 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC------------------------CCEEEEECCCCCCCC
Confidence 4899999999999999987777666643 456788999999974
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0053 Score=62.79 Aligned_cols=59 Identities=14% Similarity=0.179 Sum_probs=43.8
Q ss_pred CCeEEEEecCCccccCchhHH-HHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHH------
Q 042005 343 GIRIWVYSGDTDGALPVTCTR-YAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPAR------ 415 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~-~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~------ 415 (432)
.+++||.+|+.|.++|..... ..++. ..+..++++.++||+...++|+.
T Consensus 298 ~vPtLiI~g~dDpi~p~~~~~~~~~~~------------------------~p~~~l~~~~~gGH~~~~E~p~~~~~~~w 353 (388)
T PLN02511 298 RVPLLCIQAANDPIAPARGIPREDIKA------------------------NPNCLLIVTPSGGHLGWVAGPEAPFGAPW 353 (388)
T ss_pred CCCeEEEEcCCCCcCCcccCcHhHHhc------------------------CCCEEEEECCCcceeccccCCCCCCCCcc
Confidence 589999999999999975432 12221 24788899999999999999864
Q ss_pred HHHHHHHHHc
Q 042005 416 ALVLFSSFIN 425 (432)
Q Consensus 416 a~~m~~~fl~ 425 (432)
+.+.+.+|+.
T Consensus 354 ~~~~i~~Fl~ 363 (388)
T PLN02511 354 TDPVVMEFLE 363 (388)
T ss_pred HHHHHHHHHH
Confidence 3566666663
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.017 Score=57.38 Aligned_cols=46 Identities=11% Similarity=0.017 Sum_probs=35.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccC
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQ 412 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dq 412 (432)
.+++|+.+|+.|.+++....+... ++ ..+++++.+.++||+.+.+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~~-~~-----------------------~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKPE-SL-----------------------PPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHHH-Hh-----------------------CCCeEEEECCCCCceeeCCC
Confidence 589999999999999876544432 21 24678899999999988764
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0049 Score=57.10 Aligned_cols=164 Identities=13% Similarity=0.117 Sum_probs=93.9
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHH
Q 042005 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVD 249 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~ 249 (432)
....+|+..+++...++. ..-...++|+|.|||| ++|..+..+.. -.++.++.++|++|+.........
T Consensus 42 ~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG----~~a~~~~~~~~------~~f~a~v~~~g~~d~~~~~~~~~~ 110 (213)
T PF00326_consen 42 QADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGG----YLALLAATQHP------DRFKAAVAGAGVSDLFSYYGTTDI 110 (213)
T ss_dssp HHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHH----HHHHHHHHHTC------CGSSEEEEESE-SSTTCSBHHTCC
T ss_pred ccchhhHHHHHHHHhccc-cccceeEEEEcccccc----cccchhhcccc------eeeeeeeccceecchhcccccccc
Confidence 356777777776665554 5566789999999999 56665555432 247899999999988755432100
Q ss_pred HHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCC
Q 042005 250 FYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKP 329 (432)
Q Consensus 250 ~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~ 329 (432)
+... ........ ....... ..... ++-..
T Consensus 111 ------------~~~~-~~~~~~~~-~~~~~~~---~~~s~-------~~~~~--------------------------- 139 (213)
T PF00326_consen 111 ------------YTKA-EYLEYGDP-WDNPEFY---RELSP-------ISPAD--------------------------- 139 (213)
T ss_dssp ------------HHHG-HHHHHSST-TTSHHHH---HHHHH-------GGGGG---------------------------
T ss_pred ------------cccc-cccccCcc-chhhhhh---hhhcc-------ccccc---------------------------
Confidence 1110 00000000 0011111 11100 00000
Q ss_pred CCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccc
Q 042005 330 QTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVP 409 (432)
Q Consensus 330 ~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP 409 (432)
.+. ...+|||.+|+.|.+||...++.+.+.|.-.+ ....+++..++||-..
T Consensus 140 --------~~~-~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g--------------------~~~~~~~~p~~gH~~~ 190 (213)
T PF00326_consen 140 --------NVQ-IKPPVLIIHGENDPRVPPSQSLRLYNALRKAG--------------------KPVELLIFPGEGHGFG 190 (213)
T ss_dssp --------GCG-GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTT--------------------SSEEEEEETT-SSSTT
T ss_pred --------ccc-CCCCEEEEccCCCCccCHHHHHHHHHHHHhcC--------------------CCEEEEEcCcCCCCCC
Confidence 000 24899999999999999999999999886222 2478899999999555
Q ss_pred ccC-hHHHHHHHHHHH
Q 042005 410 SYQ-PARALVLFSSFI 424 (432)
Q Consensus 410 ~dq-P~~a~~m~~~fl 424 (432)
.++ .....+.+.+|+
T Consensus 191 ~~~~~~~~~~~~~~f~ 206 (213)
T PF00326_consen 191 NPENRRDWYERILDFF 206 (213)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHH
Confidence 332 224455555555
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.074 Score=51.50 Aligned_cols=73 Identities=11% Similarity=0.020 Sum_probs=47.9
Q ss_pred HHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccc-cccChH
Q 042005 336 IQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFV-PSYQPA 414 (432)
Q Consensus 336 l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmv-P~dqP~ 414 (432)
.+.|.+-+.++|+..|+.|... ..+.+.+.-. ..|+.- -...+.+++++.+|||.+ ..+.++
T Consensus 200 ~~~l~~~~~P~ll~~g~~D~~~-----~~~~~~~~~~--~~~~~~----------l~~~~v~~~~~~~~~H~l~~e~~~~ 262 (274)
T TIGR03100 200 KAGLERFQGPVLFILSGNDLTA-----QEFADSVLGE--PAWRGA----------LEDPGIERVEIDGADHTFSDRVWRE 262 (274)
T ss_pred HHHHHhcCCcEEEEEcCcchhH-----HHHHHHhccC--hhhHHH----------hhcCCeEEEecCCCCcccccHHHHH
Confidence 3444455799999999999873 2333322100 000000 012578899999999999 666679
Q ss_pred HHHHHHHHHHc
Q 042005 415 RALVLFSSFIN 425 (432)
Q Consensus 415 ~a~~m~~~fl~ 425 (432)
...+.+.+|+.
T Consensus 263 ~v~~~i~~wL~ 273 (274)
T TIGR03100 263 WVAARTTEWLR 273 (274)
T ss_pred HHHHHHHHHHh
Confidence 99999999985
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0061 Score=60.93 Aligned_cols=62 Identities=18% Similarity=0.140 Sum_probs=51.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccC-hHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQ-PARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dq-P~~a~~m~~ 421 (432)
.+++|+.+|+.|.+++..+++.+.+++. ..+-++..+.+++|++..+. ++.+++-+.
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~----------------------~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~ 327 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLS----------------------ISNKELHTLEDMDHVITIEPGNEEVLKKII 327 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhcc----------------------CCCcEEEEECCCCCCCccCCCHHHHHHHHH
Confidence 5899999999999999999988887753 12346678899999999985 688888899
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
.||.+
T Consensus 328 ~wL~~ 332 (332)
T TIGR01607 328 EWISN 332 (332)
T ss_pred HHhhC
Confidence 99864
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.018 Score=56.18 Aligned_cols=128 Identities=16% Similarity=0.198 Sum_probs=68.4
Q ss_pred CceEEEEEE-EcCCCCCCCCeEEEEcCCCChhhh----h-HhhhhhcCCeE-EcCCCC----eeecCCCCCCCC-----C
Q 042005 101 GRSLFYYFV-ESPQNSSSKPLVLWLNGGPGFSSF----G-AGTMMELGPFR-VNKDGK----TLYQNEYAWNKD-----Y 164 (432)
Q Consensus 101 ~~~lFywf~-es~~~p~~~PlilWlnGGPGcSSl----~-~G~f~E~GP~~-~~~~~~----~l~~N~~SW~~~-----~ 164 (432)
++.+-|..+ +...+....|+|+.|.|++|.-.. . +..+....++. +-+|.. ....+..+|+.+ |
T Consensus 29 ~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~ 108 (283)
T PLN02442 29 GCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFY 108 (283)
T ss_pred CCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCccee
Confidence 455666544 433334568999999999886421 0 01333344554 344421 111123344331 1
Q ss_pred cccCC---------hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecc
Q 042005 165 KVNGD---------IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGN 235 (432)
Q Consensus 165 ~~~~~---------~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGN 235 (432)
..... +...+++...+..++. .+...+++|+|.|+|| +.|..+..+.. -.+++++..+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~---~~~~~~~~i~G~S~GG----~~a~~~a~~~p------~~~~~~~~~~ 175 (283)
T PLN02442 109 LNATQEKWKNWRMYDYVVKELPKLLSDNFD---QLDTSRASIFGHSMGG----HGALTIYLKNP------DKYKSVSAFA 175 (283)
T ss_pred eccccCCCcccchhhhHHHHHHHHHHHHHH---hcCCCceEEEEEChhH----HHHHHHHHhCc------hhEEEEEEEC
Confidence 10000 1123344444444443 3445678999999999 56655555542 2478899999
Q ss_pred cccccc
Q 042005 236 ALIDLE 241 (432)
Q Consensus 236 g~idp~ 241 (432)
|..++.
T Consensus 176 ~~~~~~ 181 (283)
T PLN02442 176 PIANPI 181 (283)
T ss_pred CccCcc
Confidence 988754
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.023 Score=53.69 Aligned_cols=62 Identities=21% Similarity=0.217 Sum_probs=46.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.++|...++++.+.++=.+. ..++++.+..++||.+. | ..++-+.+
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~------------------~~~~~~~~~~~~~H~~~---~-~~~~~~~~ 243 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGL------------------DKNLTCLWEPGVRHRIT---P-EALDAGVA 243 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC------------------CcceEEEecCCCCCccC---H-HHHHHHHH
Confidence 36999999999999999999888887751111 12478899999999975 3 45666667
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
||.+
T Consensus 244 fl~~ 247 (249)
T PRK10566 244 FFRQ 247 (249)
T ss_pred HHHh
Confidence 7653
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.013 Score=57.91 Aligned_cols=214 Identities=14% Similarity=0.111 Sum_probs=107.4
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccccc-ch-
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETM-MK- 245 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~-~~- 245 (432)
+.+.+-..|++-+.+|.... .+ .+.+|.|+|+|| +||..-..+.. -.++-++|.+||--|... ..
T Consensus 138 d~~~~e~~fvesiE~WR~~~-~L--~KmilvGHSfGG----YLaa~YAlKyP------erV~kLiLvsP~Gf~~~~~~~~ 204 (365)
T KOG4409|consen 138 DPTTAEKEFVESIEQWRKKM-GL--EKMILVGHSFGG----YLAAKYALKYP------ERVEKLILVSPWGFPEKPDSEP 204 (365)
T ss_pred CcccchHHHHHHHHHHHHHc-CC--cceeEeeccchH----HHHHHHHHhCh------HhhceEEEecccccccCCCcch
Confidence 33445558899999999876 33 479999999999 66655544442 248889999999766532 10
Q ss_pred --hhHHHHHh--cC--CCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccC---CCcCCCCCCcCCC-C
Q 042005 246 --GTVDFYWT--HA--LMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIY---APLCNSSSKFNTE-I 315 (432)
Q Consensus 246 --~~~~~~~~--~g--lI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~---~~~c~~~~~~~~p-Y 315 (432)
.-....|. .. +.....+..++-.- .-....|....-.......+.-..|+. ...|......++. +
T Consensus 205 ~~~~~~~~w~~~~~~~~~~~nPl~~LR~~G-----p~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~f 279 (365)
T KOG4409|consen 205 EFTKPPPEWYKALFLVATNFNPLALLRLMG-----PLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAF 279 (365)
T ss_pred hhcCCChHHHhhhhhhhhcCCHHHHHHhcc-----ccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHH
Confidence 00011111 10 00111111111000 012223332221111111111111110 0012110000000 0
Q ss_pred cCccccccccccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecc
Q 042005 316 ANSGEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQN 395 (432)
Q Consensus 316 LN~~~~~~~w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~n 395 (432)
-|.-+ -..|. -+++...+..| ++.++|++..|+.|.+--..|.+ ....|. -..
T Consensus 280 k~l~~-~~g~A--r~Pm~~r~~~l-~~~~pv~fiyG~~dWmD~~~g~~-~~~~~~----------------------~~~ 332 (365)
T KOG4409|consen 280 KNLFE-PGGWA--RRPMIQRLREL-KKDVPVTFIYGDRDWMDKNAGLE-VTKSLM----------------------KEY 332 (365)
T ss_pred HHHHh-ccchh--hhhHHHHHHhh-ccCCCEEEEecCcccccchhHHH-HHHHhh----------------------ccc
Confidence 00000 01122 12333444433 34699999999999986555543 333321 123
Q ss_pred eEEEEEcCCcccccccChHHHHHHHHHHHcC
Q 042005 396 LTFVTVRGAGHFVPSYQPARALVLFSSFING 426 (432)
Q Consensus 396 LTf~~V~~AGHmvP~dqP~~a~~m~~~fl~~ 426 (432)
...+.|.+|||.|-.|+|+.--+.+..+++.
T Consensus 333 ~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 333 VEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred ceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 5679999999999999999988888887753
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.00062 Score=68.39 Aligned_cols=118 Identities=16% Similarity=0.300 Sum_probs=72.7
Q ss_pred eEEEEEEEcC--CCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcC--------CCCeeecCCCCCCCCCcccC----
Q 042005 103 SLFYYFVESP--QNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNK--------DGKTLYQNEYAWNKDYKVNG---- 168 (432)
Q Consensus 103 ~lFywf~es~--~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~--------~~~~l~~N~~SW~~~~~~~~---- 168 (432)
.-.||++++. .+|++||+||++-|| |.+.+.=|+.+.. +..+..-= ||+-+.
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~~L~~i~~~l~~~SILvL------DYsLt~~~~~ 170 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIEFLLNIYKLLPEVSILVL------DYSLTSSDEH 170 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHHHHHHHHHHcCCCeEEEE------eccccccccC
Confidence 3469999963 468889999999999 5555555554320 00011111 333222
Q ss_pred ChhhHHHHH---HHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc
Q 042005 169 DIRTARDSY---TFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET 242 (432)
Q Consensus 169 ~~~~a~d~~---~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~ 242 (432)
+..--.|++ +..+...+.. -..++.|.|+|=||+-+-.+.+++.+.+. ..-=|++++.+||+++..
T Consensus 171 ~~~yPtQL~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~-----~~~Pk~~iLISPWv~l~~ 239 (374)
T PF10340_consen 171 GHKYPTQLRQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNK-----LPYPKSAILISPWVNLVP 239 (374)
T ss_pred CCcCchHHHHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCC-----CCCCceeEEECCCcCCcC
Confidence 222233333 3333333222 34689999999999988888888766442 123479999999999863
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.21 Score=51.63 Aligned_cols=58 Identities=10% Similarity=-0.003 Sum_probs=45.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+.+|..|.++|....+.+.+.. .+..++.+.++ |+ +++|+.+++.+.+
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~------------------------~~~~l~~i~~~-~~--~e~~~~~~~~i~~ 407 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSS------------------------ADGKLLEIPFK-PV--YRNFDKALQEISD 407 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhC------------------------CCCeEEEccCC-Cc--cCCHHHHHHHHHH
Confidence 479999999999999999888666543 23455777776 33 3599999999999
Q ss_pred HHcCC
Q 042005 423 FINGT 427 (432)
Q Consensus 423 fl~~~ 427 (432)
||..+
T Consensus 408 wL~~~ 412 (414)
T PRK05077 408 WLEDR 412 (414)
T ss_pred HHHHH
Confidence 98643
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.038 Score=60.73 Aligned_cols=137 Identities=17% Similarity=0.163 Sum_probs=79.2
Q ss_pred EEecCCCCceEEEEEEEcCC--CCCCCCeEEEEcCCCChhhhh-----HhhhhhcCCeEE--cCCCCeeecCCCCCCCCC
Q 042005 94 VNVDSQDGRSLFYYFVESPQ--NSSSKPLVLWLNGGPGFSSFG-----AGTMMELGPFRV--NKDGKTLYQNEYAWNKDY 164 (432)
Q Consensus 94 l~v~~~~~~~lFywf~es~~--~p~~~PlilWlnGGPGcSSl~-----~G~f~E~GP~~~--~~~~~~l~~N~~SW~~~~ 164 (432)
+.+....|..+-.|++..+. .....|+||+.-||||.|... ...|.+.|=..+ |.-|. .----.|.+..
T Consensus 419 v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs--~g~G~~w~~~g 496 (686)
T PRK10115 419 LWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGG--GELGQQWYEDG 496 (686)
T ss_pred EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCC--CccCHHHHHhh
Confidence 33433456677766554322 235569999999999998431 234555554332 21110 00012233311
Q ss_pred cccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccccc
Q 042005 165 KVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETM 243 (432)
Q Consensus 165 ~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~ 243 (432)
....-...-+|+.+...... .-.--....+.|.|-|||| .++..++.+.. =.++.++.+.|++|....
T Consensus 497 ~~~~k~~~~~D~~a~~~~Lv-~~g~~d~~rl~i~G~S~GG----~l~~~~~~~~P------dlf~A~v~~vp~~D~~~~ 564 (686)
T PRK10115 497 KFLKKKNTFNDYLDACDALL-KLGYGSPSLCYGMGGSAGG----MLMGVAINQRP------ELFHGVIAQVPFVDVVTT 564 (686)
T ss_pred hhhcCCCcHHHHHHHHHHHH-HcCCCChHHeEEEEECHHH----HHHHHHHhcCh------hheeEEEecCCchhHhhh
Confidence 00111245667776665443 3333345679999999999 67777776542 259999999999997653
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.066 Score=50.62 Aligned_cols=62 Identities=21% Similarity=0.176 Sum_probs=47.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|++.+|+.|.++|..-.++..+.|+= .| .+.++.++.++||.+..+.-+.+.+-|++
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~---------------~g-----~~~~~~~~~~~gH~i~~~~~~~~~~~l~~ 207 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALIS---------------LG-----GDVTLDIVEDLGHAIDPRLMQFALDRLRY 207 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHH---------------CC-----CCeEEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 46999999999999999998888887750 01 24678888999999976655665555555
Q ss_pred HH
Q 042005 423 FI 424 (432)
Q Consensus 423 fl 424 (432)
++
T Consensus 208 ~l 209 (232)
T PRK11460 208 TV 209 (232)
T ss_pred Hc
Confidence 55
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0036 Score=57.56 Aligned_cols=59 Identities=17% Similarity=0.137 Sum_probs=49.7
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+||+.+|..|.+++....+.+.+.+ .+-++..+.++||+++.++|+...+.+.
T Consensus 187 i~~Pvlii~g~~D~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 242 (245)
T TIGR01738 187 ISVPFLRLYGYLDGLVPAKVVPYLDKLA------------------------PHSELYIFAKAAHAPFLSHAEAFCALLV 242 (245)
T ss_pred CCCCEEEEeecCCcccCHHHHHHHHHhC------------------------CCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 3589999999999999987766655543 2456788999999999999999999999
Q ss_pred HHH
Q 042005 422 SFI 424 (432)
Q Consensus 422 ~fl 424 (432)
+|+
T Consensus 243 ~fi 245 (245)
T TIGR01738 243 AFK 245 (245)
T ss_pred hhC
Confidence 986
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0049 Score=58.53 Aligned_cols=60 Identities=17% Similarity=0.082 Sum_probs=50.3
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-.++|||..|..|.++|....+...+.+ .+..++.+.++||+++.++|+...+.+.
T Consensus 195 i~~P~lii~G~~D~~~~~~~~~~~~~~i------------------------~~~~~~~i~~~gH~~~~e~p~~f~~~l~ 250 (256)
T PRK10349 195 VSMPFLRLYGYLDGLVPRKVVPMLDKLW------------------------PHSESYIFAKAAHAPFISHPAEFCHLLV 250 (256)
T ss_pred cCCCeEEEecCCCccCCHHHHHHHHHhC------------------------CCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 3689999999999999887655444443 3668899999999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|-+
T Consensus 251 ~~~~ 254 (256)
T PRK10349 251 ALKQ 254 (256)
T ss_pred HHhc
Confidence 9864
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.12 Score=50.94 Aligned_cols=268 Identities=14% Similarity=0.123 Sum_probs=138.7
Q ss_pred EeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHh----hhhhcCCeEE--cCCCCeeecCCCCCCCCC
Q 042005 91 SGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAG----TMMELGPFRV--NKDGKTLYQNEYAWNKDY 164 (432)
Q Consensus 91 sGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G----~f~E~GP~~~--~~~~~~l~~N~~SW~~~~ 164 (432)
.|+.... .+..++|+.+++.+++. -+|+++.|.=.++.- +- .|...|=-.+ +--|...+.. ..+..
T Consensus 11 ~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~~l~~~G~~V~~~D~RGhG~S~r---~~rg~ 82 (298)
T COG2267 11 EGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELADDLAARGFDVYALDLRGHGRSPR---GQRGH 82 (298)
T ss_pred cceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHHHHHhCCCEEEEecCCCCCCCCC---CCcCC
Confidence 4555543 35789999998876544 899999999777664 33 3444553332 2222222221 11111
Q ss_pred cccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc--
Q 042005 165 KVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET-- 242 (432)
Q Consensus 165 ~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~-- 242 (432)
. .+-.+.-.|+..|++..-.. ....|++|.|+|-|| .||..-+.+.. -+++|+++-+|++....
T Consensus 83 ~-~~f~~~~~dl~~~~~~~~~~---~~~~p~~l~gHSmGg----~Ia~~~~~~~~------~~i~~~vLssP~~~l~~~~ 148 (298)
T COG2267 83 V-DSFADYVDDLDAFVETIAEP---DPGLPVFLLGHSMGG----LIALLYLARYP------PRIDGLVLSSPALGLGGAI 148 (298)
T ss_pred c-hhHHHHHHHHHHHHHHHhcc---CCCCCeEEEEeCcHH----HHHHHHHHhCC------ccccEEEEECccccCChhH
Confidence 1 11123333444444433332 346799999999999 67766666542 58999999999998774
Q ss_pred cchhhHH-HHHhcCCCCHHH-HHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccc
Q 042005 243 MMKGTVD-FYWTHALMPDEI-YHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGE 320 (432)
Q Consensus 243 ~~~~~~~-~~~~~glI~~~~-~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~ 320 (432)
....... .+...+-+-+.. ... . . .. .....+. ..|...+.. +. .||.+.-..
T Consensus 149 ~~~~~~~~~~~~~~~~~p~~~~~~-~-~-~~----~~~~~~~-----------sr~~~~~~~--~~-----~dP~~~~~~ 203 (298)
T COG2267 149 LRLILARLALKLLGRIRPKLPVDS-N-L-LE----GVLTDDL-----------SRDPAEVAA--YE-----ADPLIGVGG 203 (298)
T ss_pred HHHHHHHHhcccccccccccccCc-c-c-cc----CcCcchh-----------hcCHHHHHH--Hh-----cCCccccCC
Confidence 1110000 000011010000 000 0 0 00 0000000 000000000 00 011100000
Q ss_pred cccccccCCCCc--HHHHHHHHHcCCeEEEEecCCccccC-chhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceE
Q 042005 321 INRNWKDKPQTV--LPIIQELMAEGIRIWVYSGDTDGALP-VTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLT 397 (432)
Q Consensus 321 ~~~~w~d~~~~~--~~~l~~LL~~girVLIy~Gd~D~i~n-~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLT 397 (432)
....|.+..... .+..+......++|||.+|..|.++. ..+..++.+++. ..+.+
T Consensus 204 ~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~----------------------~~~~~ 261 (298)
T COG2267 204 PVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAG----------------------SPDKE 261 (298)
T ss_pred ccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcC----------------------CCCce
Confidence 001121110000 11222233346999999999999999 688888888865 23467
Q ss_pred EEEEcCCcccccccCh---HHHHHHHHHHHcCC
Q 042005 398 FVTVRGAGHFVPSYQP---ARALVLFSSFINGT 427 (432)
Q Consensus 398 f~~V~~AGHmvP~dqP---~~a~~m~~~fl~~~ 427 (432)
++.+.||-|.+-.+.+ +++++-+..|+...
T Consensus 262 ~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 262 LKVIPGAYHELLNEPDRAREEVLKDILAWLAEA 294 (298)
T ss_pred EEecCCcchhhhcCcchHHHHHHHHHHHHHHhh
Confidence 8999999999988765 47888888888554
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.044 Score=50.85 Aligned_cols=111 Identities=15% Similarity=0.143 Sum_probs=57.4
Q ss_pred CCCCCeEEEEcCCCChhhhhHh-------hhhhcCCeEEcCCCCee--ecCCCCCCCCCcccCChhhHHHHHHHHHHHHH
Q 042005 115 SSSKPLVLWLNGGPGFSSFGAG-------TMMELGPFRVNKDGKTL--YQNEYAWNKDYKVNGDIRTARDSYTFLVSWLA 185 (432)
Q Consensus 115 p~~~PlilWlnGGPGcSSl~~G-------~f~E~GP~~~~~~~~~l--~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~ 185 (432)
.+..|+||+|.|+++.++. +. ++.+.|=..+-++.... ..+.+.|-.............++..++....+
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA 88 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-HhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH
Confidence 3568999999999976553 22 22233323333332111 11123332211001112233444444444444
Q ss_pred HCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 186 RFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 186 ~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
++ .....+++|+|.|.|| .+|..+..... -.++++++..|.
T Consensus 89 ~~-~id~~~i~l~G~S~Gg----~~a~~~a~~~p------~~~~~~~~~~g~ 129 (212)
T TIGR01840 89 NY-SIDPNRVYVTGLSAGG----GMTAVLGCTYP------DVFAGGASNAGL 129 (212)
T ss_pred hc-CcChhheEEEEECHHH----HHHHHHHHhCc------hhheEEEeecCC
Confidence 44 3445689999999999 55665554432 236677666655
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0054 Score=61.42 Aligned_cols=61 Identities=15% Similarity=0.150 Sum_probs=51.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcC-CcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRG-AGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~-AGHmvP~dqP~~a~~m~~ 421 (432)
..+|||..|+.|.++|....+...+.+. .+-.++++.+ |||+++.++|++..+++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~-----------------------p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~ 333 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG-----------------------PRGSLRVLRSPYGHDAFLKETDRIDAILT 333 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC-----------------------CCCeEEEEeCCccHHHHhcCHHHHHHHHH
Confidence 4799999999999999887777777652 2456788874 999999999999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+|+..
T Consensus 334 ~FL~~ 338 (343)
T PRK08775 334 TALRS 338 (343)
T ss_pred HHHHh
Confidence 99964
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.01 Score=59.14 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=51.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcC-CcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRG-AGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~-AGHmvP~dqP~~a~~m~~ 421 (432)
.++||+..|+.|.++|....+.+.+.+. +.++++|.+ |||+++.+||+....+++
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip------------------------~a~l~~i~~~~GH~~~~~~~~~~~~~~~ 330 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIP------------------------NAELRPIESIWGHLAGFGQNPADIAFID 330 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCccccccCcHHHHHHHH
Confidence 5899999999999999988777766653 456788998 999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 331 ~~~~ 334 (339)
T PRK07581 331 AALK 334 (339)
T ss_pred HHHH
Confidence 9984
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=96.14 E-value=1 Score=43.96 Aligned_cols=121 Identities=19% Similarity=0.272 Sum_probs=74.9
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChh-------hhhHhhhhhcCCeEEcCCCCeeecCCCCCCC-----CCcc--
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFS-------SFGAGTMMELGPFRVNKDGKTLYQNEYAWNK-----DYKV-- 166 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcS-------Sl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~-----~~~~-- 166 (432)
+...-||++.-..-++.+||||-|-|+=|.. .++ .+..+.|=..+-+|+. +-+||. .+..
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d-~lAd~~gFlV~yPdg~-----~~~wn~~~~~~~~~p~~ 117 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWD-ALADREGFLVAYPDGY-----DRAWNANGCGNWFGPAD 117 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchh-hhhcccCcEEECcCcc-----ccccCCCcccccCCccc
Confidence 4677889887777778889999999987643 343 4455555555555553 456655 1111
Q ss_pred -cCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 167 -NGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 167 -~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
..+.+.+..+.+.......+| ......+||+|-|-|| .+|.++.-.-. --+.++++..|..
T Consensus 118 ~~~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG----~Ma~~lac~~p------~~faa~A~VAg~~ 179 (312)
T COG3509 118 RRRGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGG----RMANRLACEYP------DIFAAIAPVAGLL 179 (312)
T ss_pred ccCCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHH----HHHHHHHhcCc------ccccceeeeeccc
Confidence 123334444444444444555 4566789999999999 55655544321 2367777766665
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.015 Score=55.35 Aligned_cols=61 Identities=8% Similarity=0.001 Sum_probs=51.4
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-.+++|+..|..|.++|....+...+.+. +-+++.+.+|||++..++|++..+++.
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~~------------------------~a~~~~i~~~GH~~~~e~p~~v~~~l~ 247 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENWP------------------------PAQTYVLEDSDHSAFFSVPTTLFQYLL 247 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhCC------------------------cceEEEecCCCCchhhcCHHHHHHHHH
Confidence 35899999999999999976666665543 456788999999999999999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+|+..
T Consensus 248 ~~~~~ 252 (255)
T PLN02965 248 QAVSS 252 (255)
T ss_pred HHHHH
Confidence 99853
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.017 Score=57.57 Aligned_cols=61 Identities=30% Similarity=0.431 Sum_probs=52.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
+.+|||..|+.|.++|....+...+.+ .|..+..|.+|||.+..++|++....+..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~------------------------pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~ 319 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKL------------------------PNAELVEIPGAGHLPHLERPEEVAALLRS 319 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhC------------------------CCceEEEeCCCCcccccCCHHHHHHHHHH
Confidence 378999999999999998555555543 48899999999999999999999999999
Q ss_pred HHcCC
Q 042005 423 FINGT 427 (432)
Q Consensus 423 fl~~~ 427 (432)
|+.+.
T Consensus 320 Fi~~~ 324 (326)
T KOG1454|consen 320 FIARL 324 (326)
T ss_pred HHHHh
Confidence 99653
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.16 Score=49.18 Aligned_cols=127 Identities=17% Similarity=0.183 Sum_probs=67.6
Q ss_pred ceEEEEEE-EcCCCCCCCCeEEEEcCCCChhhhhH------hhhh-hcCCeEEcCCCC----eeecCCCCCCCC-----C
Q 042005 102 RSLFYYFV-ESPQNSSSKPLVLWLNGGPGFSSFGA------GTMM-ELGPFRVNKDGK----TLYQNEYAWNKD-----Y 164 (432)
Q Consensus 102 ~~lFywf~-es~~~p~~~PlilWlnGGPGcSSl~~------G~f~-E~GP~~~~~~~~----~l~~N~~SW~~~-----~ 164 (432)
..+-|..+ +...+.+..|+|++|.|+++.... + -.+. +.|=-.+-+|.. .....+..|+.+ |
T Consensus 25 ~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~-~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~ 103 (275)
T TIGR02821 25 VPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHEN-FMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFY 103 (275)
T ss_pred CceEEEEEcCCCccCCCCCEEEEccCCCCCccH-HHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcccc
Confidence 44555544 433234567999999999876542 2 1233 344333444431 111122445431 1
Q ss_pred cccC------ChhhHHHHHHHHHHHHHH-CCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 165 KVNG------DIRTARDSYTFLVSWLAR-FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 165 ~~~~------~~~~a~d~~~fL~~F~~~-fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
...+ .......+.+.|..+.+. ++ ....+++|+|.|+|| ++|..+..+.. -.+++++..+|+
T Consensus 104 ~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~G~S~GG----~~a~~~a~~~p------~~~~~~~~~~~~ 172 (275)
T TIGR02821 104 VDATEEPWSQHYRMYSYIVQELPALVAAQFP-LDGERQGITGHSMGG----HGALVIALKNP------DRFKSVSAFAPI 172 (275)
T ss_pred ccCCcCcccccchHHHHHHHHHHHHHHhhCC-CCCCceEEEEEChhH----HHHHHHHHhCc------ccceEEEEECCc
Confidence 1000 001122233444444444 43 455689999999999 56666655442 246888888888
Q ss_pred ccc
Q 042005 238 IDL 240 (432)
Q Consensus 238 idp 240 (432)
.++
T Consensus 173 ~~~ 175 (275)
T TIGR02821 173 VAP 175 (275)
T ss_pred cCc
Confidence 775
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.049 Score=44.78 Aligned_cols=65 Identities=25% Similarity=0.242 Sum_probs=55.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.++..|.++|+.+.+...+.|. +-..+++.++||-+-...-.-+.+++.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~------------------------~s~lvt~~g~gHg~~~~~s~C~~~~v~~ 89 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP------------------------GSRLVTVDGAGHGVYAGGSPCVDKAVDD 89 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC------------------------CceEEEEeccCcceecCCChHHHHHHHH
Confidence 3899999999999999999999998875 3366999999999986555677899999
Q ss_pred HHcCCCCCC
Q 042005 423 FINGTLPPP 431 (432)
Q Consensus 423 fl~~~~~~~ 431 (432)
|+..-.+|+
T Consensus 90 yl~~G~lP~ 98 (103)
T PF08386_consen 90 YLLDGTLPA 98 (103)
T ss_pred HHHcCCCCC
Confidence 998877775
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.038 Score=56.24 Aligned_cols=64 Identities=20% Similarity=0.172 Sum_probs=51.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEc-CCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVR-GAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~-~AGHmvP~dqP~~a~~m~~ 421 (432)
..+|||..|+.|.++|....++..+.+. +. -...+++.+. ++||+.+.++|++..+.+.
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~-----------------~a---~~~~~l~~i~~~~GH~~~le~p~~~~~~L~ 368 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALL-----------------AA---GADVSYAEIDSPYGHDAFLLDDPRYGRLVR 368 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHH-----------------hc---CCCeEEEEeCCCCCchhHhcCHHHHHHHHH
Confidence 5899999999999999988777666653 00 0124678886 9999999999999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+|+.+
T Consensus 369 ~FL~~ 373 (379)
T PRK00175 369 AFLER 373 (379)
T ss_pred HHHHh
Confidence 99965
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.069 Score=54.65 Aligned_cols=66 Identities=12% Similarity=0.068 Sum_probs=53.4
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcC-CcccccccChHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRG-AGHFVPSYQPARALVLF 420 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~-AGHmvP~dqP~~a~~m~ 420 (432)
-..+||+..|+.|.++|....++..+.+.= .-.+.++..|.+ +||+.+.++|+...+.+
T Consensus 322 I~~PtLvI~G~~D~l~p~~~~~~la~~lp~--------------------~~~~a~l~~I~s~~GH~~~le~p~~~~~~I 381 (389)
T PRK06765 322 IEANVLMIPCKQDLLQPPRYNYKMVDILQK--------------------QGKYAEVYEIESINGHMAGVFDIHLFEKKI 381 (389)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHhhh--------------------cCCCeEEEEECCCCCcchhhcCHHHHHHHH
Confidence 368999999999999998777766666530 002578889985 99999999999999999
Q ss_pred HHHHcCC
Q 042005 421 SSFINGT 427 (432)
Q Consensus 421 ~~fl~~~ 427 (432)
.+|+..+
T Consensus 382 ~~FL~~~ 388 (389)
T PRK06765 382 YEFLNRK 388 (389)
T ss_pred HHHHccc
Confidence 9999753
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.66 Score=45.74 Aligned_cols=61 Identities=18% Similarity=0.198 Sum_probs=45.7
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
...+||+..|-.+--++..-..+.... +.+.-+..+.+|||+|..|+|+...+++.
T Consensus 252 ~~~pvlfi~g~~S~fv~~~~~~~~~~~------------------------fp~~e~~~ld~aGHwVh~E~P~~~~~~i~ 307 (315)
T KOG2382|consen 252 YTGPVLFIKGLQSKFVPDEHYPRMEKI------------------------FPNVEVHELDEAGHWVHLEKPEEFIESIS 307 (315)
T ss_pred cccceeEEecCCCCCcChhHHHHHHHh------------------------ccchheeecccCCceeecCCHHHHHHHHH
Confidence 346888888888877776544444333 23456677788999999999999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
.|+..
T Consensus 308 ~Fl~~ 312 (315)
T KOG2382|consen 308 EFLEE 312 (315)
T ss_pred HHhcc
Confidence 98853
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.21 Score=48.16 Aligned_cols=104 Identities=18% Similarity=0.242 Sum_probs=63.3
Q ss_pred CCCCeEEEEcCCCChhhhhHhhhh----hcCCeEEcCCCCeeecCCCCCCC--CCcccCChhhHHHHHHHHHHHHHHCCC
Q 042005 116 SSKPLVLWLNGGPGFSSFGAGTMM----ELGPFRVNKDGKTLYQNEYAWNK--DYKVNGDIRTARDSYTFLVSWLARFPE 189 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~~G~f~----E~GP~~~~~~~~~l~~N~~SW~~--~~~~~~~~~~a~d~~~fL~~F~~~fP~ 189 (432)
..-|+++.+.|| |.|.|+++.|. +.=-|++- .+..+-|.=++ +...-+-+..++|+...++++|..-|
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~el~s~~~~r~~----a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~- 145 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFASELKSKIRCRCL----ALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELP- 145 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHHHHHhhcceeEE----EeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCC-
Confidence 355999999998 99998877764 22233330 11122222222 00112446788999999998884432
Q ss_pred CCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 190 YKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 190 ~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
.++.|.|+|.|| +||.+-...+ .--+|-|+.+.+=+
T Consensus 146 ---~~iilVGHSmGG----aIav~~a~~k-----~lpsl~Gl~viDVV 181 (343)
T KOG2564|consen 146 ---PQIILVGHSMGG----AIAVHTAASK-----TLPSLAGLVVIDVV 181 (343)
T ss_pred ---CceEEEeccccc----hhhhhhhhhh-----hchhhhceEEEEEe
Confidence 369999999999 5664433332 23468888766533
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.044 Score=55.03 Aligned_cols=62 Identities=21% Similarity=0.198 Sum_probs=50.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEec-ceEEEEEc-CCcccccccChHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQ-NLTFVTVR-GAGHFVPSYQPARALVLF 420 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~-nLTf~~V~-~AGHmvP~dqP~~a~~m~ 420 (432)
..+||+..|+.|.++|....+...+.+. ... ..+|+.|. +|||+++.++|+...+.|
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~---------------------~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l 346 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALP---------------------AAGLRVTYVEIESPYGHDAFLVETDQVEELI 346 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHh---------------------hcCCceEEEEeCCCCCcchhhcCHHHHHHHH
Confidence 5899999999999999988887777654 001 13555664 899999999999999999
Q ss_pred HHHHc
Q 042005 421 SSFIN 425 (432)
Q Consensus 421 ~~fl~ 425 (432)
.+|++
T Consensus 347 ~~FL~ 351 (351)
T TIGR01392 347 RGFLR 351 (351)
T ss_pred HHHhC
Confidence 99984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.086 Score=53.12 Aligned_cols=60 Identities=13% Similarity=0.153 Sum_probs=47.7
Q ss_pred CCeEEEEecCCccccCchhH--HHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCC----cccccccChHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCT--RYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGA----GHFVPSYQPARA 416 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt--~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~A----GHmvP~dqP~~a 416 (432)
..+|||.+|+.|.++|.... +...+.+ .+-.+++|.+| ||++. ++|+..
T Consensus 292 ~~PvLvI~G~~D~~~p~~~~~~~~la~~i------------------------p~a~l~~i~~a~~~~GH~~~-e~P~~~ 346 (360)
T PRK06489 292 KAPVLAINSADDERNPPETGVMEAALKRV------------------------KHGRLVLIPASPETRGHGTT-GSAKFW 346 (360)
T ss_pred CCCEEEEecCCCcccChhhHHHHHHHHhC------------------------cCCeEEEECCCCCCCCcccc-cCHHHH
Confidence 58999999999999987654 3333343 34577999996 99985 899999
Q ss_pred HHHHHHHHcCC
Q 042005 417 LVLFSSFINGT 427 (432)
Q Consensus 417 ~~m~~~fl~~~ 427 (432)
.+.+.+|+...
T Consensus 347 ~~~i~~FL~~~ 357 (360)
T PRK06489 347 KAYLAEFLAQV 357 (360)
T ss_pred HHHHHHHHHhc
Confidence 99999999643
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=93.45 E-value=3 Score=44.51 Aligned_cols=49 Identities=14% Similarity=0.260 Sum_probs=38.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPAR 415 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~ 415 (432)
.++||+..|..|.++|+..++...+.+. +-...++.++||+++..+|..
T Consensus 415 ~vPvLvV~G~~D~IvP~~sa~~l~~~i~------------------------~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 415 KVPVYIIATREDHIAPWQSAYRGAALLG------------------------GPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CCCEEEEeeCCCCcCCHHHHHHHHHHCC------------------------CCEEEEECCCCCchHhhCCCC
Confidence 5899999999999999998887776653 223357889999998887743
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.31 Score=44.40 Aligned_cols=56 Identities=20% Similarity=0.275 Sum_probs=48.2
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-.+++|+.+|..|.++|........+.+. +-.++.+.++||....+.|+..-+++.
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~~~------------------------~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKLIP------------------------NSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHHST------------------------TEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhcC------------------------CCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 46999999999999999988888555543 567899999999999999999888875
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=91.96 E-value=1.1 Score=44.50 Aligned_cols=119 Identities=21% Similarity=0.193 Sum_probs=65.2
Q ss_pred EEEEcCCCCCCCCeEEEEcCCCChhhhh---HhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHH
Q 042005 107 YFVESPQNSSSKPLVLWLNGGPGFSSFG---AGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSW 183 (432)
Q Consensus 107 wf~es~~~p~~~PlilWlnGGPGcSSl~---~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F 183 (432)
.+.++. ..+.|+||++.|+.+.+..- ...|.+.|=..+-.|-...... +. ..+.+.+.++..++.+-
T Consensus 43 v~~P~~--~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~------~~--~~~i~d~~~~~~~l~~~ 112 (313)
T PLN00021 43 VATPSE--AGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGP------DG--TDEIKDAAAVINWLSSG 112 (313)
T ss_pred EEeCCC--CCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCC------Cc--hhhHHHHHHHHHHHHhh
Confidence 444442 35689999999998766541 1333556744444442211110 11 12333456666666654
Q ss_pred HHH-CC---CCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 184 LAR-FP---EYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 184 ~~~-fP---~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
++. .| +....+++|+|+|.||..+-.+|. +... ......+++++..+|+...
T Consensus 113 l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~----~~~~-~~~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 113 LAAVLPEGVRPDLSKLALAGHSRGGKTAFALAL----GKAA-VSLPLKFSALIGLDPVDGT 168 (313)
T ss_pred hhhhcccccccChhheEEEEECcchHHHHHHHh----hccc-cccccceeeEEeecccccc
Confidence 432 12 233467999999999954444443 3221 0112568888888887543
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=91.62 E-value=4.1 Score=40.85 Aligned_cols=137 Identities=17% Similarity=0.147 Sum_probs=79.2
Q ss_pred EeeEEecCCCCceEEEEEEEcCCC-C-CCCCeEEEEcCCCChhhhh-----Hhhhhh----cCCeEEcCCCCeeec-CCC
Q 042005 91 SGYVNVDSQDGRSLFYYFVESPQN-S-SSKPLVLWLNGGPGFSSFG-----AGTMME----LGPFRVNKDGKTLYQ-NEY 158 (432)
Q Consensus 91 sGyl~v~~~~~~~lFywf~es~~~-p-~~~PlilWlnGGPGcSSl~-----~G~f~E----~GP~~~~~~~~~l~~-N~~ 158 (432)
+.=++++ ....++-+.|..... + ..+|+||++-||=-|-+.. -.++.. .+=..+..| .++.+ ++
T Consensus 63 ~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVd-YRLAPEh~- 138 (336)
T KOG1515|consen 63 SKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVD-YRLAPEHP- 138 (336)
T ss_pred eeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecC-cccCCCCC-
Confidence 3444444 346799998877653 3 5899999999997665420 022222 222222222 11111 01
Q ss_pred CCCCCCcccCChhhHHHHHHHHHH-HHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 159 AWNKDYKVNGDIRTARDSYTFLVS-WLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 159 SW~~~~~~~~~~~~a~d~~~fL~~-F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
++. .=++.-..+..++++ |.+..-..+ .++|+|.|=||..+-.+|+++.+.. ...+.|+|+++.-|+
T Consensus 139 -----~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~----~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 139 -----FPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK----LSKPKIKGQILIYPF 206 (336)
T ss_pred -----CCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc----CCCcceEEEEEEecc
Confidence 111 112222223334444 666554443 3999999999988888888777653 135889999999888
Q ss_pred cccccc
Q 042005 238 IDLETM 243 (432)
Q Consensus 238 idp~~~ 243 (432)
..-...
T Consensus 207 ~~~~~~ 212 (336)
T KOG1515|consen 207 FQGTDR 212 (336)
T ss_pred cCCCCC
Confidence 766543
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=90.99 E-value=0.44 Score=47.24 Aligned_cols=110 Identities=15% Similarity=0.153 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCC---Chhh----hhHhhhhh-cCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCC
Q 042005 117 SKPLVLWLNGGP---GFSS----FGAGTMME-LGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFP 188 (432)
Q Consensus 117 ~~PlilWlnGGP---GcSS----l~~G~f~E-~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP 188 (432)
..|+|||+-||. |... + ...|.. .|=..+..| ..+.+. + .+. ...+.+.+.++++.+.-+.+
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~-~~~la~~~g~~Vv~vd-Yrlape-~----~~p--~~~~D~~~a~~~l~~~~~~~- 149 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRI-MRLLASYSGCTVIGID-YTLSPE-A----RFP--QAIEEIVAVCCYFHQHAEDY- 149 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHH-HHHHHHHcCCEEEEec-CCCCCC-C----CCC--CcHHHHHHHHHHHHHhHHHh-
Confidence 469999999997 2211 2 133333 454333333 111110 0 121 11222333344444443333
Q ss_pred CCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 189 EYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 189 ~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
.....++.|+|+|.||+.+-.+|..+.+.. .....++++++..|++|.
T Consensus 150 ~~d~~~i~l~G~SaGG~la~~~a~~~~~~~----~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 150 GINMSRIGFAGDSAGAMLALASALWLRDKQ----IDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred CCChhHEEEEEECHHHHHHHHHHHHHHhcC----CCccChhheEEECCccCC
Confidence 234567999999999977766665553332 112468899999998874
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=90.83 E-value=2.6 Score=40.67 Aligned_cols=60 Identities=8% Similarity=-0.066 Sum_probs=48.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.+++++..|..|.++|..-.+++++.+. +-.++++. +||+.+..+|+...++|.+
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~------------------------~~~~~~l~-~gH~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP------------------------PSQVYELE-SDHSPFFSTPFLLFGLLIK 265 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC------------------------ccEEEEEC-CCCCccccCHHHHHHHHHH
Confidence 4799999999999999987777776643 12456674 9999999999999999998
Q ss_pred HHcCC
Q 042005 423 FINGT 427 (432)
Q Consensus 423 fl~~~ 427 (432)
.....
T Consensus 266 ~a~~~ 270 (273)
T PLN02211 266 AAASV 270 (273)
T ss_pred HHHHh
Confidence 87543
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.03 E-value=4.3 Score=39.76 Aligned_cols=122 Identities=21% Similarity=0.156 Sum_probs=76.5
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCCChhh-----hhHhhhhhcCCeE--EcCCCCeeecCCCCCCCCCcccCChhh
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSS-----FGAGTMMELGPFR--VNKDGKTLYQNEYAWNKDYKVNGDIRT 172 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGPGcSS-----l~~G~f~E~GP~~--~~~~~~~l~~N~~SW~~~~~~~~~~~~ 172 (432)
.+..||.-.......++.+-+|+.+-|.=+-|| . ...|..+|=-. ++..|...+.--. .| ..+-+.+
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~-a~~l~~~g~~v~a~D~~GhG~SdGl~----~y-i~~~d~~ 109 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQST-AKRLAKSGFAVYAIDYEGHGRSDGLH----AY-VPSFDLV 109 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHH-HHHHHhCCCeEEEeeccCCCcCCCCc----cc-CCcHHHH
Confidence 367888877765554566678888887655442 3 25666666433 3332211111000 13 2356678
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 173 ARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 173 a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
.+|...|+..+-. ..++++.|.|++|||-|| ++|..+..+. +--..|+++..|+.
T Consensus 110 v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGG----AV~Ll~~~k~------p~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 110 VDDVISFFDSIKE-REENKGLPRFLFGESMGG----AVALLIALKD------PNFWDGAILVAPMC 164 (313)
T ss_pred HHHHHHHHHHHhh-ccccCCCCeeeeecCcch----HHHHHHHhhC------Ccccccceeeeccc
Confidence 8888777776544 458999999999999999 7777776653 23467777777764
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=89.59 E-value=0.39 Score=51.09 Aligned_cols=59 Identities=14% Similarity=0.168 Sum_probs=44.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.+++||.+|+.|.++|....+.+.+. ..+..++++ .+||+++.+.|+...+.+.+
T Consensus 233 ~~P~lii~G~~D~~v~~~~~~~~~~~------------------------~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~ 287 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPALYDDLSRW------------------------VPRLWRREI-KAGHWLPMSHPQVLAAAVAE 287 (582)
T ss_pred cCceEEEEeCCCcccCHHHhcccccc------------------------CCcceEEEc-cCCCcchhhChhHHHHHHHH
Confidence 48999999999999997544333221 123444555 57999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 288 fl~~ 291 (582)
T PRK05855 288 FVDA 291 (582)
T ss_pred HHHh
Confidence 9964
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=89.18 E-value=1.9 Score=47.96 Aligned_cols=224 Identities=16% Similarity=0.170 Sum_probs=123.6
Q ss_pred CceEEEEEEEcCC--CCCCCCeEEEEcCCCChhhh------h--HhhhhhcCCeEEcCCCCeeecCCCCCCC---CCccc
Q 042005 101 GRSLFYYFVESPQ--NSSSKPLVLWLNGGPGFSSF------G--AGTMMELGPFRVNKDGKTLYQNEYAWNK---DYKVN 167 (432)
Q Consensus 101 ~~~lFywf~es~~--~p~~~PlilWlnGGPGcSSl------~--~G~f~E~GP~~~~~~~~~l~~N~~SW~~---~~~~~ 167 (432)
+-.+.+++.-.++ +.++-||+++.-|||++-+. + ..++...|...+.-|+.... .+.|.- -+..-
T Consensus 507 ~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~--~~G~~~~~~~~~~l 584 (755)
T KOG2100|consen 507 GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSG--GYGWDFRSALPRNL 584 (755)
T ss_pred cEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcC--CcchhHHHHhhhhc
Confidence 3456677665543 33567999999999982111 1 12344456655443331111 111111 01111
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCC-CCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchh
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKT-RDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKG 246 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~-~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~ 246 (432)
++ ...+|.....+.+.+.+ +.. ..+.|+|-|||| +++..++.+..+ --+|--+-.+|++|...-...
T Consensus 585 G~-~ev~D~~~~~~~~~~~~--~iD~~ri~i~GwSyGG----y~t~~~l~~~~~-----~~fkcgvavaPVtd~~~yds~ 652 (755)
T KOG2100|consen 585 GD-VEVKDQIEAVKKVLKLP--FIDRSRVAIWGWSYGG----YLTLKLLESDPG-----DVFKCGVAVAPVTDWLYYDST 652 (755)
T ss_pred CC-cchHHHHHHHHHHHhcc--cccHHHeEEeccChHH----HHHHHHhhhCcC-----ceEEEEEEecceeeeeeeccc
Confidence 22 23445556666666555 444 469999999999 899998887531 345665777888876521111
Q ss_pred hHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccc
Q 042005 247 TVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWK 326 (432)
Q Consensus 247 ~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~ 326 (432)
+.+ ..+|+-.+ ..+. |.-..
T Consensus 653 ~te--rymg~p~~-------------------~~~~---------------y~e~~------------------------ 672 (755)
T KOG2100|consen 653 YTE--RYMGLPSE-------------------NDKG---------------YEESS------------------------ 672 (755)
T ss_pred ccH--hhcCCCcc-------------------ccch---------------hhhcc------------------------
Confidence 100 00221111 0110 10000
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcc
Q 042005 327 DKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGH 406 (432)
Q Consensus 327 d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGH 406 (432)
....+..+ ++.+.|+.+|..|..+.+..+..++++|.-.|.. +..++..+..|
T Consensus 673 -----~~~~~~~~--~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~--------------------~~~~vypde~H 725 (755)
T KOG2100|consen 673 -----VSSPANNI--KTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVP--------------------FRLLVYPDENH 725 (755)
T ss_pred -----ccchhhhh--ccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCc--------------------eEEEEeCCCCc
Confidence 00111111 1356899999999999999999999999744443 44466777778
Q ss_pred cccccCh-HHHHHHHHHHHc
Q 042005 407 FVPSYQP-ARALVLFSSFIN 425 (432)
Q Consensus 407 mvP~dqP-~~a~~m~~~fl~ 425 (432)
-+-.-.+ ...+..+.+|+.
T Consensus 726 ~is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 726 GISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred ccccccchHHHHHHHHHHHH
Confidence 7755443 456677777775
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=88.74 E-value=3.6 Score=39.81 Aligned_cols=123 Identities=10% Similarity=0.011 Sum_probs=65.3
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCC---hhh-hhH----hhhhhcCCeEEcCC--CCeeecCCCCCCCCCcccCCh
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPG---FSS-FGA----GTMMELGPFRVNKD--GKTLYQNEYAWNKDYKVNGDI 170 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPG---cSS-l~~----G~f~E~GP~~~~~~--~~~l~~N~~SW~~~~~~~~~~ 170 (432)
..++|.|+++.... ..+|+||.+.|-.+ ++. + + -.|.+.|=-.+..| |..-+..+. ...+-.
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~-~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~------~~~~~~ 80 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRM-VALQARAFAAGGFGVLQIDLYGCGDSAGDF------AAARWD 80 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHH-HHHHHHHHHHCCCEEEEECCCCCCCCCCcc------ccCCHH
Confidence 45689998876532 33699999998643 222 1 1 23445563222222 211111111 011112
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccch
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMK 245 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~ 245 (432)
...+|+..+ .+|++.. ...+++|.|+|.||..+-.+| .+. .-.++++++-+|.++-.....
T Consensus 81 ~~~~Dv~~a-i~~L~~~---~~~~v~LvG~SmGG~vAl~~A----~~~------p~~v~~lVL~~P~~~g~~~l~ 141 (266)
T TIGR03101 81 VWKEDVAAA-YRWLIEQ---GHPPVTLWGLRLGALLALDAA----NPL------AAKCNRLVLWQPVVSGKQQLQ 141 (266)
T ss_pred HHHHHHHHH-HHHHHhc---CCCCEEEEEECHHHHHHHHHH----HhC------ccccceEEEeccccchHHHHH
Confidence 334554443 3344433 236899999999995444333 322 235788999999887654433
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=88.63 E-value=1.1 Score=43.19 Aligned_cols=103 Identities=15% Similarity=0.175 Sum_probs=52.0
Q ss_pred CCCCeEEEEcCCCChhhhhHhhh----hhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCC
Q 042005 116 SSKPLVLWLNGGPGFSSFGAGTM----MELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYK 191 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~~G~f----~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~ 191 (432)
.+.|.||++.|..+.++. +.-+ .+-| |++- .+...-+..+... ......-++..+.+.++++....
T Consensus 16 ~~~p~vvliHG~~~~~~~-w~~~~~~L~~~g-~~vi----~~dl~g~G~s~~~--~~~~~~~~~~~~~l~~~i~~l~~-- 85 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWC-WYKIRCLMENSG-YKVT----CIDLKSAGIDQSD--ADSVTTFDEYNKPLIDFLSSLPE-- 85 (273)
T ss_pred CCCCeEEEECCCCCCcCc-HHHHHHHHHhCC-CEEE----EecccCCCCCCCC--cccCCCHHHHHHHHHHHHHhcCC--
Confidence 567999999998777765 4332 2234 3221 0111111111100 00011222333445555554322
Q ss_pred CCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 192 TRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 192 ~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
..+++|.|+||||. ++.....+.. -.++++++.++..
T Consensus 86 ~~~v~lvGhS~GG~----v~~~~a~~~p------~~v~~lv~~~~~~ 122 (273)
T PLN02211 86 NEKVILVGHSAGGL----SVTQAIHRFP------KKICLAVYVAATM 122 (273)
T ss_pred CCCEEEEEECchHH----HHHHHHHhCh------hheeEEEEecccc
Confidence 46899999999995 4444433321 2467777776653
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=87.64 E-value=5.7 Score=38.33 Aligned_cols=115 Identities=14% Similarity=0.280 Sum_probs=71.7
Q ss_pred CCeEEEEcCCCChhhhhHhhhh----hc-CC-eEEc---CCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCC
Q 042005 118 KPLVLWLNGGPGFSSFGAGTMM----EL-GP-FRVN---KDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFP 188 (432)
Q Consensus 118 ~PlilWlnGGPGcSSl~~G~f~----E~-GP-~~~~---~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP 188 (432)
+++++|+-|=||.... |--|. |. +| +.+- --|.....+.-...++....+-++-.+.-++|++++....+
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 5899999999998886 44443 22 32 3321 11111111110000111223556666777888998887653
Q ss_pred CCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 189 EYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 189 ~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
..+.+++|.|+|=|+ +++.+|+++.. ....+++++.+-=|.+...
T Consensus 81 -~~~~~liLiGHSIGa----yi~levl~r~~---~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 81 -KPNVKLILIGHSIGA----YIALEVLKRLP---DLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred -CCCCcEEEEeCcHHH----HHHHHHHHhcc---ccCCceeEEEEeCCccccc
Confidence 246789999999999 99999999875 1356777777776766443
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=87.08 E-value=1.4 Score=45.23 Aligned_cols=61 Identities=18% Similarity=0.324 Sum_probs=49.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccc---ccccChHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHF---VPSYQPARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHm---vP~dqP~~a~~m 419 (432)
.++|+|+.|+.|.+++....+++.+.|. . ...+..+.++||+ ...+.|+..++-
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp-------------~----------~~~l~~l~~~gH~dfi~~~eape~V~~~ 381 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELP-------------S----------KPELLYLENYGHIDFLLSTSAKEDVYNH 381 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCC-------------C----------ccEEEEcCCCCCHHHHhCcchHHHHHHH
Confidence 4799999999999999999888888875 0 0234677999996 455889999999
Q ss_pred HHHHHcC
Q 042005 420 FSSFING 426 (432)
Q Consensus 420 ~~~fl~~ 426 (432)
+.+|+.+
T Consensus 382 Il~fL~~ 388 (395)
T PLN02872 382 MIQFFRS 388 (395)
T ss_pred HHHHHHH
Confidence 9999864
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=86.94 E-value=1.2 Score=37.67 Aligned_cols=43 Identities=26% Similarity=0.378 Sum_probs=34.3
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccc
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHF 407 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHm 407 (432)
..++|++.+|+.|.+++....+...++++ ..-+++.+.|++|+
T Consensus 103 ~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 103 IRIPVLFIHGENDPLVPPEQVRRLYEALP-----------------------GPKELYIIPGAGHF 145 (145)
T ss_dssp TTSEEEEEEETT-SSSHHHHHHHHHHHHC-----------------------SSEEEEEETTS-TT
T ss_pred cCCcEEEEEECCCCcCCHHHHHHHHHHcC-----------------------CCcEEEEeCCCcCc
Confidence 35799999999999999988888888875 23467999999996
|
... |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=86.76 E-value=7.1 Score=41.80 Aligned_cols=124 Identities=20% Similarity=0.184 Sum_probs=66.2
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCCChhh----hh---HhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhh
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSS----FG---AGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRT 172 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGPGcSS----l~---~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~ 172 (432)
.+..|+...+.-.. ....|+||.+.|--..+. .. .-.|.+.|=-.+..|-...-..... +...+ ...
T Consensus 5 DG~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~----~~~~~-~~~ 78 (550)
T TIGR00976 5 DGTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGE----FDLLG-SDE 78 (550)
T ss_pred CCCEEEEEEEecCC-CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCc----eEecC-ccc
Confidence 35678876664332 346799999987544332 10 0123344433222221100000000 01111 346
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 173 ARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 173 a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
++|+.+++. |+.+.|. .+.++.++|.||||. +|..+.... .-.||+++..+++.|..
T Consensus 79 ~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~----~a~~~a~~~------~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 79 AADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAV----TQLLAAVLQ------PPALRAIAPQEGVWDLY 135 (550)
T ss_pred chHHHHHHH-HHHhCCC-CCCcEEEEEeChHHH----HHHHHhccC------CCceeEEeecCcccchh
Confidence 667666555 6666653 346899999999994 444443332 23699999988887643
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=86.71 E-value=1.6 Score=42.84 Aligned_cols=68 Identities=22% Similarity=0.375 Sum_probs=51.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEe-cceEEEEEcCCccccc--ccChHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGY-QNLTFVTVRGAGHFVP--SYQPARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~-~nLTf~~V~~AGHmvP--~dqP~~a~~m 419 (432)
+.+|+||+|..|-++|+..++..++++- +.. .+++|.++.+++|+.. ...|. ++.-
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c--------------------~~G~a~V~~~~~~~~~H~~~~~~~~~~-a~~W 277 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWC--------------------AAGGADVEYVRYPGGGHLGAAFASAPD-ALAW 277 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHH--------------------HcCCCCEEEEecCCCChhhhhhcCcHH-HHHH
Confidence 5899999999999999999999998863 112 2688999999999975 45654 4555
Q ss_pred HHHHHcCCCCCC
Q 042005 420 FSSFINGTLPPP 431 (432)
Q Consensus 420 ~~~fl~~~~~~~ 431 (432)
|++-+.|++.++
T Consensus 278 l~~rf~G~~~~~ 289 (290)
T PF03583_consen 278 LDDRFAGKPATS 289 (290)
T ss_pred HHHHHCCCCCCC
Confidence 666666777653
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.07 E-value=2.2 Score=38.35 Aligned_cols=61 Identities=21% Similarity=0.361 Sum_probs=45.1
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
+...++++..|+.|.+.+......+...+.. ...++++.++||+...++|+...+.+
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~gH~~~~~~p~~~~~~i 275 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAALPN-----------------------DARLVVIPGAGHFPHLEAPEAFAAAL 275 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhCCC-----------------------CceEEEeCCCCCcchhhcHHHHHHHH
Confidence 3469999999999966665443444444330 36778999999999999999777777
Q ss_pred HHHH
Q 042005 421 SSFI 424 (432)
Q Consensus 421 ~~fl 424 (432)
..|+
T Consensus 276 ~~~~ 279 (282)
T COG0596 276 LAFL 279 (282)
T ss_pred HHHH
Confidence 6644
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=84.79 E-value=4.9 Score=42.13 Aligned_cols=88 Identities=23% Similarity=0.341 Sum_probs=45.5
Q ss_pred CCCCCeEEEEcCCC---Chhhh--hHhhhhhcCCeEEcCCCCeeecCCCCCCCCC--cccCC--hhhHHHHHHHHHHHHH
Q 042005 115 SSSKPLVLWLNGGP---GFSSF--GAGTMMELGPFRVNKDGKTLYQNEYAWNKDY--KVNGD--IRTARDSYTFLVSWLA 185 (432)
Q Consensus 115 p~~~PlilWlnGGP---GcSSl--~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~--~~~~~--~~~a~d~~~fL~~F~~ 185 (432)
.++.||+||+-||+ |.++. .-.+..+.+++.+-.=. ....+..+-... ..... -......++++++-.+
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~--yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~ 169 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSIN--YRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIA 169 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEec--ccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 35679999999997 32221 11233333334432111 111222222100 00011 1234445677777777
Q ss_pred HCCCCCCCCeEEEccccccc
Q 042005 186 RFPEYKTRDFFIAGESYAGH 205 (432)
Q Consensus 186 ~fP~~~~~~~yI~GESYaG~ 205 (432)
.|. -..+++.|+|+|.||+
T Consensus 170 ~fg-gd~~~v~~~G~SaG~~ 188 (493)
T cd00312 170 AFG-GDPDSVTIFGESAGGA 188 (493)
T ss_pred HhC-CCcceEEEEeecHHHH
Confidence 773 4557899999999995
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=84.74 E-value=2.2 Score=44.89 Aligned_cols=85 Identities=24% Similarity=0.320 Sum_probs=62.3
Q ss_pred HHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeE-EEEecceEEEEEcCCcccc--c
Q 042005 333 LPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGY-AVGYQNLTFVTVRGAGHFV--P 409 (432)
Q Consensus 333 ~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~-~k~~~nLTf~~V~~AGHmv--P 409 (432)
-+.|....++|=|+|+|||..|.+++..+|.++-+++. ...+|- ...-+-+-|..|.|.||-. |
T Consensus 343 ~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~-------------~~~g~~~~~v~dF~RlF~vPGm~HC~gG~ 409 (474)
T PF07519_consen 343 DPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVV-------------ARMGGALADVDDFYRLFMVPGMGHCGGGP 409 (474)
T ss_pred CcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHH-------------HhcccccccccceeEEEecCCCcccCCCC
Confidence 35677777889999999999999999999999998874 122222 1111224568999999986 4
Q ss_pred ccChHHHHHHHHHHHcCCCCC
Q 042005 410 SYQPARALVLFSSFINGTLPP 430 (432)
Q Consensus 410 ~dqP~~a~~m~~~fl~~~~~~ 430 (432)
-..|-.++..|.+|+.+-.=|
T Consensus 410 g~~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 410 GPDPFDALTALVDWVENGKAP 430 (474)
T ss_pred CCCCCCHHHHHHHHHhCCCCC
Confidence 456778899999999764433
|
It also includes several bacterial homologues of unknown function. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=84.67 E-value=1 Score=41.77 Aligned_cols=59 Identities=24% Similarity=0.412 Sum_probs=40.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
+.+|++.+|+.|.++|....+...+.|+= .| .+++|.+..+.||-++ ...++.+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~---------------~~-----~~v~~~~~~g~gH~i~----~~~~~~~~~ 210 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKA---------------AG-----ANVEFHEYPGGGHEIS----PEELRDLRE 210 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHC---------------TT------GEEEEEETT-SSS------HHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHh---------------cC-----CCEEEEEcCCCCCCCC----HHHHHHHHH
Confidence 58999999999999999888777776640 00 2588899999999996 455566777
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
||.
T Consensus 211 ~l~ 213 (216)
T PF02230_consen 211 FLE 213 (216)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.57 E-value=5 Score=39.96 Aligned_cols=54 Identities=13% Similarity=0.106 Sum_probs=34.2
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
.+.|+++.++|+. . .. .+.+.|.|.|+|| .+|..+..+.. -.++++++.++...
T Consensus 121 ~~~a~dl~~ll~~----l-~l-~~~~~lvG~SmGG----~vA~~~A~~~P------~~V~~LvLi~s~~~ 174 (343)
T PRK08775 121 ADQADAIALLLDA----L-GI-ARLHAFVGYSYGA----LVGLQFASRHP------ARVRTLVVVSGAHR 174 (343)
T ss_pred HHHHHHHHHHHHH----c-CC-CcceEEEEECHHH----HHHHHHHHHCh------HhhheEEEECcccc
Confidence 3456666665553 2 22 2346799999999 56666655432 25888988887543
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=84.34 E-value=10 Score=42.44 Aligned_cols=29 Identities=14% Similarity=-0.077 Sum_probs=25.5
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcC
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLG 370 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~ 370 (432)
-.++||+.+|..|..++..++.++.++|.
T Consensus 454 IkvPvLlIhGw~D~~V~~~~s~~ly~aL~ 482 (767)
T PRK05371 454 IKASVLVVHGLNDWNVKPKQVYQWWDALP 482 (767)
T ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHHH
Confidence 35899999999999999999888888875
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=84.27 E-value=6 Score=36.55 Aligned_cols=117 Identities=22% Similarity=0.231 Sum_probs=56.3
Q ss_pred CCCCCeEEEEcCCCChhhhhHhhhhhc---CC-eEE-cCCCCe---eecCCC---CCCCCC--ccc--CChhhHHHHHHH
Q 042005 115 SSSKPLVLWLNGGPGFSSFGAGTMMEL---GP-FRV-NKDGKT---LYQNEY---AWNKDY--KVN--GDIRTARDSYTF 179 (432)
Q Consensus 115 p~~~PlilWlnGGPGcSSl~~G~f~E~---GP-~~~-~~~~~~---l~~N~~---SW~~~~--~~~--~~~~~a~d~~~f 179 (432)
.+.+|+||||-|= |.+.-.+..+.+. -| ..+ -+.++. .....+ +|=... ... .+.+..++..+.
T Consensus 11 ~~~~~lvi~LHG~-G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 11 GKAKPLVILLHGY-GDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp ST-SEEEEEE--T-TS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCceEEEEECCC-CCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 4577999999986 6666434555551 12 222 222221 112334 775511 111 133333334444
Q ss_pred HHHHHHHC--CCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc
Q 042005 180 LVSWLARF--PEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET 242 (432)
Q Consensus 180 L~~F~~~f--P~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~ 242 (432)
|.+|++.- -....++++|.|-|-|| .+|..+.-+. .-.+.|++.-+|++-+..
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa----~~al~~~l~~------p~~~~gvv~lsG~~~~~~ 144 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGA----AMALYLALRY------PEPLAGVVALSGYLPPES 144 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHH----HHHHHHHHCT------SSTSSEEEEES---TTGC
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHH----HHHHHHHHHc------CcCcCEEEEeeccccccc
Confidence 44444321 12566789999999999 6666666554 237899999999875543
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=84.23 E-value=4.9 Score=37.78 Aligned_cols=36 Identities=14% Similarity=0.106 Sum_probs=25.1
Q ss_pred CCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 192 TRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 192 ~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
..++++.|+|+|| .+|..+..+. .-.++++++.|+.
T Consensus 73 ~~~~~lvGhS~Gg----~ia~~~a~~~------p~~v~~lili~~~ 108 (256)
T PRK10349 73 PDKAIWLGWSLGG----LVASQIALTH------PERVQALVTVASS 108 (256)
T ss_pred CCCeEEEEECHHH----HHHHHHHHhC------hHhhheEEEecCc
Confidence 3579999999999 4555554433 2357888887763
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=84.06 E-value=13 Score=34.91 Aligned_cols=110 Identities=17% Similarity=0.158 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCCCChhhhhHh-------hhhhcCCeEEcCCCCee--ecCCCCCCCCCcccCChhhHHHHHHHHHHHHHH
Q 042005 116 SSKPLVLWLNGGPGFSSFGAG-------TMMELGPFRVNKDGKTL--YQNEYAWNKDYKVNGDIRTARDSYTFLVSWLAR 186 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~~G-------~f~E~GP~~~~~~~~~l--~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~ 186 (432)
...||||+|-|.=+...- +. +=.+.|=..+-+++..- ..+-|.|.......+ ...+. +...|.+.+..
T Consensus 14 ~~~PLVv~LHG~~~~a~~-~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g-~~d~~-~i~~lv~~v~~ 90 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQSAED-FAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRG-GGDVA-FIAALVDYVAA 90 (220)
T ss_pred CCCCEEEEeCCCCCCHHH-HHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccC-ccchh-hHHHHHHhHhh
Confidence 467999999998554332 11 11122322333443211 122334433211111 11222 33333444443
Q ss_pred CCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 187 FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 187 fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
....-.+.+|++|.|=|| .+|..|.-... =-+.++++..|..
T Consensus 91 ~~~iD~~RVyv~G~S~Gg----~ma~~la~~~p------d~faa~a~~sG~~ 132 (220)
T PF10503_consen 91 RYNIDPSRVYVTGLSNGG----MMANVLACAYP------DLFAAVAVVSGVP 132 (220)
T ss_pred hcccCCCceeeEEECHHH----HHHHHHHHhCC------ccceEEEeecccc
Confidence 335667889999999999 56665554432 2577888777763
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.63 E-value=4.6 Score=41.34 Aligned_cols=126 Identities=18% Similarity=0.256 Sum_probs=75.8
Q ss_pred EeeEEecCCCCceEEEEEEEcCC----CCCCCCeEEEEcCCCChhhhh-----HhhhhhcCCeE---EcCCC----Ceee
Q 042005 91 SGYVNVDSQDGRSLFYYFVESPQ----NSSSKPLVLWLNGGPGFSSFG-----AGTMMELGPFR---VNKDG----KTLY 154 (432)
Q Consensus 91 sGyl~v~~~~~~~lFywf~es~~----~p~~~PlilWlnGGPGcSSl~-----~G~f~E~GP~~---~~~~~----~~l~ 154 (432)
.=+|...+ .|.-..=|+..... +..++|+||-|-|=.|.|.-. ....++.| ++ +|.-| +-.+
T Consensus 95 Reii~~~D-GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~VVfN~RG~~g~~LtT 172 (409)
T KOG1838|consen 95 REIIKTSD-GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRVVVFNHRGLGGSKLTT 172 (409)
T ss_pred eEEEEeCC-CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEEEEECCCCCCCCccCC
Confidence 45666654 34555666654432 356789999999999988531 35567788 44 34333 1011
Q ss_pred cCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEec
Q 042005 155 QNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMG 234 (432)
Q Consensus 155 ~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IG 234 (432)
++- |. .+. .+|+-.+++---++||+ +++|.+|.|+||. .+..++-+..++ .-=..|++|-
T Consensus 173 pr~------f~-ag~---t~Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~---iL~nYLGE~g~~----~~l~~a~~v~ 232 (409)
T KOG1838|consen 173 PRL------FT-AGW---TEDLREVVNHIKKRYPQ---APLFAVGFSMGGN---ILTNYLGEEGDN----TPLIAAVAVC 232 (409)
T ss_pred Cce------ee-cCC---HHHHHHHHHHHHHhCCC---CceEEEEecchHH---HHHHHhhhccCC----CCceeEEEEe
Confidence 111 11 122 22333333333357875 6999999999996 567777665433 2347889999
Q ss_pred cccc
Q 042005 235 NALI 238 (432)
Q Consensus 235 Ng~i 238 (432)
|||=
T Consensus 233 ~Pwd 236 (409)
T KOG1838|consen 233 NPWD 236 (409)
T ss_pred ccch
Confidence 9983
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=83.41 E-value=2.4 Score=42.48 Aligned_cols=61 Identities=10% Similarity=0.132 Sum_probs=46.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh---HHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP---ARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP---~~a~~m 419 (432)
..+||+.+|+.|.++|....+.+.+.+. + ...++.++ .+||+.+.+.+ +.+..-
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~-----------------~-----~~~~~~~~-~~gH~~~~~~~~~~~~v~~~ 342 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVS-----------------S-----EDYTELSF-PGGHIGIYVSGKAQKEVPPA 342 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcC-----------------C-----CCeEEEEc-CCCCEEEEECchhHhhhhHH
Confidence 5899999999999999998888887764 0 12344444 58999998765 566777
Q ss_pred HHHHHcC
Q 042005 420 FSSFING 426 (432)
Q Consensus 420 ~~~fl~~ 426 (432)
+.+|+..
T Consensus 343 i~~wl~~ 349 (350)
T TIGR01836 343 IGKWLQA 349 (350)
T ss_pred HHHHHHh
Confidence 7788753
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=83.12 E-value=10 Score=36.29 Aligned_cols=102 Identities=21% Similarity=0.490 Sum_probs=56.2
Q ss_pred CCCCeEEEEcCCCChhhhhHhhh-----hhcC---Ce-EEcCCC----CeeecCCCCC-CCCCcccCChhhHHHHHHHHH
Q 042005 116 SSKPLVLWLNGGPGFSSFGAGTM-----MELG---PF-RVNKDG----KTLYQNEYAW-NKDYKVNGDIRTARDSYTFLV 181 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~~G~f-----~E~G---P~-~~~~~~----~~l~~N~~SW-~~~~~~~~~~~~a~d~~~fL~ 181 (432)
.++|+++|+-|-||-++. +--| .+.+ |+ .+.--+ +.-..+..|= |++ ..+-++..+.=++|++
T Consensus 27 ~~~~li~~IpGNPG~~gF-Y~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~e--ifsL~~QV~HKlaFik 103 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF-YTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEE--IFSLQDQVDHKLAFIK 103 (301)
T ss_pred CCceEEEEecCCCCchhH-HHHHHHHHHHhcccccceeEEeccccccCCccccccccccccc--ccchhhHHHHHHHHHH
Confidence 688999999999998875 3322 2222 21 121101 0000111111 111 1123334444456776
Q ss_pred HHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEe
Q 042005 182 SWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAM 233 (432)
Q Consensus 182 ~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~I 233 (432)
++. | +++++||.|+|=|. ++..+|+..++ ...+++-..+
T Consensus 104 ~~~---P--k~~ki~iiGHSiGa----Ym~Lqil~~~k----~~~~vqKa~~ 142 (301)
T KOG3975|consen 104 EYV---P--KDRKIYIIGHSIGA----YMVLQILPSIK----LVFSVQKAVL 142 (301)
T ss_pred HhC---C--CCCEEEEEecchhH----HHHHHHhhhcc----cccceEEEEE
Confidence 654 3 57899999999998 88888888754 2345544443
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=83.05 E-value=22 Score=33.83 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=46.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|.++.|+.|.+|...-...|-+..+ +.++ ..+...|||-+.+|.+.....+.+
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~-----------------------~~f~-l~~fdGgHFfl~~~~~~v~~~i~~ 231 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK-----------------------GDFT-LRVFDGGHFFLNQQREEVLARLEQ 231 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc-----------------------CCce-EEEecCcceehhhhHHHHHHHHHH
Confidence 4799999999999999876666655422 2344 566778999999999999998888
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
.+.
T Consensus 232 ~l~ 234 (244)
T COG3208 232 HLA 234 (244)
T ss_pred Hhh
Confidence 874
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=82.99 E-value=2.2 Score=36.21 Aligned_cols=63 Identities=14% Similarity=0.238 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
...+.+.+.|++..+.+| +..+.|+|+|-||-.+-.+|..+.++... ...+++-+..|.|-+.
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCcccc
Confidence 445567777788777777 46899999999998888888877765432 2467888888888774
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=81.79 E-value=3.6 Score=37.28 Aligned_cols=57 Identities=14% Similarity=0.033 Sum_probs=39.9
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
.+.-..+++.+.+..+.++.+. .++++.|+|||| .++........ -.++++++.++.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~l~~---~~~~~vG~S~Gg----~~~~~~a~~~p------~~v~~lvl~~~~ 78 (230)
T PF00561_consen 22 FPDYTTDDLAADLEALREALGI---KKINLVGHSMGG----MLALEYAAQYP------ERVKKLVLISPP 78 (230)
T ss_dssp SCTHCHHHHHHHHHHHHHHHTT---SSEEEEEETHHH----HHHHHHHHHSG------GGEEEEEEESES
T ss_pred cccccHHHHHHHHHHHHHHhCC---CCeEEEEECCCh----HHHHHHHHHCc------hhhcCcEEEeee
Confidence 3445566677777777776642 349999999999 55555555542 279999988885
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=81.13 E-value=2.1 Score=39.03 Aligned_cols=63 Identities=19% Similarity=0.203 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHHHHHH---CCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 171 RTARDSYTFLVSWLAR---FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~---fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
...+|..++++-..+. + ++...+++|+|+|=||+.+-.++..+.+.. ...++++++..|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~------~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRG------LPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTT------TCHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhc------ccchhhhhcccccccc
Confidence 4455555544443332 3 355678999999999988888886666553 2349999999998877
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=81.02 E-value=1.7 Score=40.11 Aligned_cols=97 Identities=15% Similarity=0.131 Sum_probs=56.1
Q ss_pred eEEEEcCCCChhhhhHhhhhhcCC--eEE---cCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCCC
Q 042005 120 LVLWLNGGPGFSSFGAGTMMELGP--FRV---NKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRD 194 (432)
Q Consensus 120 lilWlnGGPGcSSl~~G~f~E~GP--~~~---~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~ 194 (432)
-|+++-+|=|.++.=..+-..+++ +.+ ...+. . .......+-++.|+...+.|+ +..|+ -|
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~-------~-~~~~~~~si~~la~~y~~~I~---~~~~~---gp 67 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGR-------G-DDEPPPDSIEELASRYAEAIR---ARQPE---GP 67 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTS-------C-TTSHEESSHHHHHHHHHHHHH---HHTSS---SS
T ss_pred eEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCC-------C-CCCCCCCCHHHHHHHHHHHhh---hhCCC---CC
Confidence 366777776655541244444555 333 22211 0 011111244566666666554 33442 39
Q ss_pred eEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 195 FFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 195 ~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
++|+|.|+||..+=.+|+++.++. ...+.|++.++.
T Consensus 68 ~~L~G~S~Gg~lA~E~A~~Le~~G-------~~v~~l~liD~~ 103 (229)
T PF00975_consen 68 YVLAGWSFGGILAFEMARQLEEAG-------EEVSRLILIDSP 103 (229)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTT--------SESEEEEESCS
T ss_pred eeehccCccHHHHHHHHHHHHHhh-------hccCceEEecCC
Confidence 999999999987777777776653 468888888854
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.45 E-value=2.4 Score=39.51 Aligned_cols=59 Identities=17% Similarity=0.251 Sum_probs=42.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
+.+|++.+|..|.+||..-+++..+.|.=.| .+..+..+. .||.++.+-=+ .+++
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g--------------------~~v~~~~~~-~GH~i~~e~~~----~~~~ 200 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASG--------------------ADVEVRWHE-GGHEIPPEELE----AARS 200 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcC--------------------CCEEEEEec-CCCcCCHHHHH----HHHH
Confidence 6899999999999999999988887775111 134445555 99999865444 4445
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+.+
T Consensus 201 wl~~ 204 (207)
T COG0400 201 WLAN 204 (207)
T ss_pred HHHh
Confidence 6543
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=80.31 E-value=5.5 Score=33.42 Aligned_cols=90 Identities=21% Similarity=0.236 Sum_probs=49.1
Q ss_pred eEEEEcCCCChhhhhHhh----hhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCCCe
Q 042005 120 LVLWLNGGPGFSSFGAGT----MMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDF 195 (432)
Q Consensus 120 lilWlnGGPGcSSl~~G~----f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~ 195 (432)
+||++.|+-|.+.. +.. |.+.|=..+..+. ...++.....+.-+++...-+..+ ...++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~~l~~~G~~v~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i 63 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAEALAEQGYAVVAFDY--------------PGHGDSDGADAVERVLADIRAGYP--DPDRI 63 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHHHHHHTTEEEEEESC--------------TTSTTSHHSHHHHHHHHHHHHHHC--TCCEE
T ss_pred CEEEECCCCCCHHH-HHHHHHHHHHCCCEEEEEec--------------CCCCccchhHHHHHHHHHHHhhcC--CCCcE
Confidence 58999999876554 333 3344443333221 111111112222233332223333 45789
Q ss_pred EEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 196 FIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 196 yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
+++|.|.||. +|..+...+ -.++++++-+|+
T Consensus 64 ~l~G~S~Gg~----~a~~~~~~~-------~~v~~~v~~~~~ 94 (145)
T PF12695_consen 64 ILIGHSMGGA----IAANLAARN-------PRVKAVVLLSPY 94 (145)
T ss_dssp EEEEETHHHH----HHHHHHHHS-------TTESEEEEESES
T ss_pred EEEEEccCcH----HHHHHhhhc-------cceeEEEEecCc
Confidence 9999999995 444444443 368888888885
|
... |
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=80.26 E-value=3.8 Score=42.09 Aligned_cols=68 Identities=16% Similarity=0.213 Sum_probs=49.1
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
..+.+++...+++..+++|..+ ..++++|||-||-.+-..|..|.+.... ...++++.+..|.|-+..
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 4678889999999999998764 3699999999996555555555543211 124567788888888765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 432 | ||||
| 1bcr_A | 263 | Complex Of The Wheat Serine Carboxypeptidase, Cpdw- | 6e-56 | ||
| 1whs_A | 255 | Structure Of The Complex Of L-Benzylsuccinate With | 1e-55 | ||
| 1wht_A | 256 | Structure Of The Complex Of L-Benzylsuccinate With | 1e-55 | ||
| 3sc2_A | 259 | Refined Atomic Model Of Wheat Serine Carboxypeptida | 2e-55 | ||
| 1gxs_A | 270 | Crystal Structure Of Hydroxynitrile Lyase From Sorg | 6e-47 | ||
| 1bcr_B | 160 | Complex Of The Wheat Serine Carboxypeptidase, Cpdw- | 3e-32 | ||
| 1wht_B | 153 | Structure Of The Complex Of L-Benzylsuccinate With | 4e-32 | ||
| 3sc2_B | 152 | Refined Atomic Model Of Wheat Serine Carboxypeptida | 4e-32 | ||
| 1whs_B | 153 | Structure Of The Complex Of L-Benzylsuccinate With | 4e-32 | ||
| 1ivy_A | 452 | Physiological Dimer Hpp Precursor Length = 452 | 2e-30 | ||
| 1ivy_A | 452 | Physiological Dimer Hpp Precursor Length = 452 | 4e-08 | ||
| 4az0_A | 300 | Crystal Structure Of Cathepsin A, Complexed With 8a | 5e-30 | ||
| 1gxs_B | 158 | Crystal Structure Of Hydroxynitrile Lyase From Sorg | 2e-28 | ||
| 1wpx_A | 421 | Crystal Structure Of Carboxypeptidase Y Inhibitor C | 1e-23 | ||
| 1ac5_A | 483 | Crystal Structure Of Kex1(delta)p, A Prohormone-pro | 3e-23 | ||
| 1cpy_A | 421 | Site-Directed Mutagenesis On (Serine) Carboxypeptid | 3e-22 | ||
| 4az0_B | 155 | Crystal Structure Of Cathepsin A, Complexed With 8a | 3e-08 |
| >pdb|1BCR|A Chain A, Complex Of The Wheat Serine Carboxypeptidase, Cpdw-Ii, With The Microbial Peptide Aldehyde Inhibitor, Antipain, And Arginine At Room Temperature Length = 263 | Back alignment and structure |
|
| >pdb|1WHS|A Chain A, Structure Of The Complex Of L-Benzylsuccinate With Wheat Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution Length = 255 | Back alignment and structure |
|
| >pdb|1WHT|A Chain A, Structure Of The Complex Of L-Benzylsuccinate With Wheat Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution Length = 256 | Back alignment and structure |
|
| >pdb|3SC2|A Chain A, Refined Atomic Model Of Wheat Serine Carboxypeptidase Ii At 2.2- Angstroms Resolution Length = 259 | Back alignment and structure |
|
| >pdb|1GXS|A Chain A, Crystal Structure Of Hydroxynitrile Lyase From Sorghum Bicolor In Complex With Inhibitor Benzoic Acid: A Novel Cyanogenic Enzyme Length = 270 | Back alignment and structure |
|
| >pdb|1BCR|B Chain B, Complex Of The Wheat Serine Carboxypeptidase, Cpdw-Ii, With The Microbial Peptide Aldehyde Inhibitor, Antipain, And Arginine At Room Temperature Length = 160 | Back alignment and structure |
|
| >pdb|1WHT|B Chain B, Structure Of The Complex Of L-Benzylsuccinate With Wheat Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution Length = 153 | Back alignment and structure |
|
| >pdb|3SC2|B Chain B, Refined Atomic Model Of Wheat Serine Carboxypeptidase Ii At 2.2- Angstroms Resolution Length = 152 | Back alignment and structure |
|
| >pdb|1WHS|B Chain B, Structure Of The Complex Of L-Benzylsuccinate With Wheat Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution Length = 153 | Back alignment and structure |
|
| >pdb|1IVY|A Chain A, Physiological Dimer Hpp Precursor Length = 452 | Back alignment and structure |
|
| >pdb|1IVY|A Chain A, Physiological Dimer Hpp Precursor Length = 452 | Back alignment and structure |
|
| >pdb|4AZ0|A Chain A, Crystal Structure Of Cathepsin A, Complexed With 8a. Length = 300 | Back alignment and structure |
|
| >pdb|1GXS|B Chain B, Crystal Structure Of Hydroxynitrile Lyase From Sorghum Bicolor In Complex With Inhibitor Benzoic Acid: A Novel Cyanogenic Enzyme Length = 158 | Back alignment and structure |
|
| >pdb|1WPX|A Chain A, Crystal Structure Of Carboxypeptidase Y Inhibitor Complexed With The Cognate Proteinase Length = 421 | Back alignment and structure |
|
| >pdb|1AC5|A Chain A, Crystal Structure Of Kex1(delta)p, A Prohormone-processing Carboxypeptidase From Saccharomyces Cerevisiae Length = 483 | Back alignment and structure |
|
| >pdb|1CPY|A Chain A, Site-Directed Mutagenesis On (Serine) Carboxypeptidase Y From Yeast. The Significance Of Thr 60 And Met 398 In Hydrolysis And Aminolysis Reactions Length = 421 | Back alignment and structure |
|
| >pdb|4AZ0|B Chain B, Crystal Structure Of Cathepsin A, Complexed With 8a. Length = 155 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 432 | |||
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 1e-126 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 1e-121 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 1e-105 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 1e-101 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 7e-93 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 9e-35 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 2e-46 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 5e-45 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 |
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* Length = 421 | Back alignment and structure |
|---|
Score = 370 bits (952), Expect = e-126
Identities = 104/432 (24%), Positives = 163/432 (37%), Gaps = 90/432 (20%)
Query: 74 KIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSF 133
KI+ + N QY+GY++V+ +D + F++ ES + + P++LWLNGGPG SS
Sbjct: 1 KIKDPKILGIDPNVTQYTGYLDVEDED-KHFFFWTFESRNDPAKDPVILWLNGGPGCSSL 59
Query: 134 GAGTMMELGPFRVNKDGKTLYQNEYAWNK-------------------DYKVNGDIRTAR 174
G LGP + D K + N Y+WN V+ + +
Sbjct: 60 T-GLFFALGPSSIGPDLKPIG-NPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGK 117
Query: 175 DSYTFLVSWLARFPEY--KTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIA 232
D Y FL + +FPEY K +DF IAG SYAGHYIP A IL + NL +
Sbjct: 118 DVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDR----NFNLTSVL 173
Query: 233 MGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAA 292
+GN L D T P + S +++ S + CL I+ +
Sbjct: 174 IGNGLTDPLTQYNYYEPMACGEGGEPSVLP-----SEECSAMEDSLERCLGLIESCYDS- 227
Query: 293 GNIYSYDIYAPLCNSSSKFNTEIAN----------------------------------- 317
+++S CN++ +
Sbjct: 228 QSVWSCVPATIYCNNAQLAPYQRTGRNVYDIRKDCEGGNLCYPTLQDIDDYLNQDYVKEA 287
Query: 318 -----------SGEINRNW---KDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTR 363
+ +INRN+ D + + +L+ + + I VY+GD D +
Sbjct: 288 VGAEVDHYESCNFDINRNFLFAGDWMKPYHTAVTDLLNQDLPILVYAGDKDFICNWLGNK 347
Query: 364 YAVKKLGTPVRTAW-----YPWYTQ--GEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARA 416
L + W EV G Y++ T++ V GH VP P A
Sbjct: 348 AWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPENA 407
Query: 417 LVLFSSFINGTL 428
L + + +I+G
Sbjct: 408 LSMVNEWIHGGF 419
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 Length = 483 | Back alignment and structure |
|---|
Score = 361 bits (928), Expect = e-121
Identities = 106/476 (22%), Positives = 169/476 (35%), Gaps = 124/476 (26%)
Query: 70 KDKDKIESLPGQPLGVN----FDQYSGYVNV-----DSQDGRSLFYYFVESPQNSS---- 116
+ K E LPG + ++G++ + D QD L Y+F + N S
Sbjct: 6 EYKVAYELLPGLSEVPDPSNIPQMHAGHIPLRSEDADEQDSSDLEYFFWKFTNNDSNGNV 65
Query: 117 SKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK-------------- 162
+PL++WLNGGPG SS G ++E GPFRVN DGK LY NE +W
Sbjct: 66 DRPLIIWLNGGPGCSSMD-GALVESGPFRVNSDGK-LYLNEGSWISKGDLLFIDQPTGTG 123
Query: 163 --------------DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIP 208
+ + FL ++ FPE TR ++GESYAG YIP
Sbjct: 124 FSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIP 183
Query: 209 QLAQAILYNNQHA--NQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLT 266
A AIL +N+ + + +L+ + +GN ID T + F L+ +
Sbjct: 184 FFANAILNHNKFSKIDGDTYDLKALLIGNGWIDPNTQSLSYLPFAMEKKLIDE------- 236
Query: 267 SSYNFASLNSSDKVCLEFIDQGD---------AAAGNIYS-----------------YDI 300
S+ NF L ++ + C I+ NI + ++
Sbjct: 237 SNPNFKHLTNAHENCQNLINSASTDEAAHFSYQECENILNLLLSYTRESSQKGTADCLNM 296
Query: 301 YAPLCNSSSK----------------FN------------TEIAN----SGEINRNWK-D 327
Y S F+ +I + + +
Sbjct: 297 YNFNLKDSYPSCGMNWPKDISFVSKFFSTPGVIDSLHLDSDKIDHWKECTNSVGTKLSNP 356
Query: 328 KPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKL------GTPVRTAWYPWY 381
+ + ++ L+ GI I +++GD D + L G + W
Sbjct: 357 ISKPSIHLLPGLLESGIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWI 416
Query: 382 TQ-------GEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFINGTLPP 430
+ E GY +NLTFV+V A H VP + + + + N +
Sbjct: 417 HKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVPFDKSLVSRGIVDIYSNDVMII 472
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* Length = 255 | Back alignment and structure |
|---|
Score = 310 bits (796), Expect = e-105
Identities = 114/256 (44%), Positives = 139/256 (54%), Gaps = 27/256 (10%)
Query: 73 DKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSS 132
D+I LPGQP V+FD YSGY+ VD GRSLFY E+P+++ PLVLWLNGGPG SS
Sbjct: 4 DRIARLPGQP-AVDFDMYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSS 62
Query: 133 FGAGTMMELGPFRVNKDGKTLYQNEYAWNK----------------------DYKVNGDI 170
G ELG FRV G L NEY WNK D +GD
Sbjct: 63 VAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDN 122
Query: 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRG 230
RTA DSY FL W RFP YK RDF+IAGESYAGHY+P+L+Q + + +INL+G
Sbjct: 123 RTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVH----RSKNPVINLKG 178
Query: 231 IAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDA 290
+GN LID GT +F+W H ++ D+ Y L + S C D A
Sbjct: 179 FMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAATDVATA 238
Query: 291 AAGNIYSYDIYAPLCN 306
GNI Y +Y P+CN
Sbjct: 239 EQGNIDMYSLYTPVCN 254
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 Length = 270 | Back alignment and structure |
|---|
Score = 301 bits (774), Expect = e-101
Identities = 106/266 (39%), Positives = 141/266 (53%), Gaps = 26/266 (9%)
Query: 66 QDGLKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQ-NSSSKPLVLWL 124
Q ++ D+I LPGQP GV F Y GYV +D +GR+L+Y+F E+ + ++ PLVLWL
Sbjct: 1 QLQQQEDDRILGLPGQPNGVAFGMYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWL 60
Query: 125 NGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK---------------------D 163
NGGPG SS G G M ELG FRV+ +G++L NEYAWNK
Sbjct: 61 NGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGFSYSNTSS 120
Query: 164 YKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQ 223
GD + A+D+YTFLV W RFP Y R+F+IAGES GH+IPQL+Q + N N
Sbjct: 121 DLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES--GHFIPQLSQVVYRNRN--NS 176
Query: 224 TIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLE 283
IN +G+ + + L + M G + +W H L+ DE S C E
Sbjct: 177 PFINFQGLLVSSGLTNDHEDMIGMFESWWHHGLISDETRDSGLKVCPGTSFMHPTPECTE 236
Query: 284 FIDQGDAAAGNIYSYDIYAPLCNSSS 309
++ A GNI Y IY P C+
Sbjct: 237 VWNKALAEQGNINPYTIYTPTCDREP 262
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 Length = 452 | Back alignment and structure |
|---|
Score = 286 bits (734), Expect = 7e-93
Identities = 85/266 (31%), Positives = 126/266 (47%), Gaps = 35/266 (13%)
Query: 70 KDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPG 129
D+D+I+ LPG +F QYSGY+ + L Y+FVES ++ + P+VLWLNGGPG
Sbjct: 2 PDQDEIQRLPGLAKQPSFRQYSGYLKSS--GSKHLHYWFVESQKDPENSPVVLWLNGGPG 59
Query: 130 FSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK--------------------DYKVNGD 169
SS G + E GPF V DG TL N Y+WN + D
Sbjct: 60 CSSLD-GLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATND 118
Query: 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLR 229
A+ ++ L + FPEYK F+ GESYAG YIP LA ++ + +NL+
Sbjct: 119 TEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPS------MNLQ 172
Query: 230 GIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFAS----LNSSDKVCLEFI 285
G+A+GN L E V F + H L+ + ++ L + + ++ D C+ +
Sbjct: 173 GLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNL 232
Query: 286 DQGDAAAGN--IYSYDIYAPLCNSSS 309
+ GN + Y++YAP
Sbjct: 233 QEVARIVGNSGLNIYNLYAPCAGGVP 258
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 Length = 452 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 9e-35
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 318 SGEINRNWKDKPQTVLP-IIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTA 376
+ +N ++ +++ ++ L ++ +I +Y+GD D A + V L +
Sbjct: 335 NFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQ 394
Query: 377 WYPWYTQ-----GEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFING 426
PW + ++ G+ + ++ F+T++GAGH VP+ +P A +FS F+N
Sbjct: 395 RRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNK 449
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* Length = 153 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 2e-46
Identities = 61/113 (53%), Positives = 82/113 (72%)
Query: 318 SGEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAW 377
S IN +W D P+++LPI +EL+A G+RIWV+SGDTD +P+T TRY++ LG P T+W
Sbjct: 39 SDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSW 98
Query: 378 YPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFINGTLPP 430
YPWY EVGG++ Y+ LT V+VRGAGH VP ++P +ALVLF F+ G P
Sbjct: 99 YPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQYFLQGKPMP 151
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 Length = 158 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 5e-45
Identities = 57/116 (49%), Positives = 79/116 (68%), Gaps = 3/116 (2%)
Query: 318 SGEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAW 377
S I W +LP+ +EL+ G+R+WVYSGDTD +PV+ TR ++ L PV+T+W
Sbjct: 41 SNTIFDQWGQAADDLLPVYRELIQAGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSW 100
Query: 378 YPWY---TQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFINGTLPP 430
YPWY T+ EVGG++V Y+ LT+VTVRGAGH VP ++PA+A +LF F+ G P
Sbjct: 101 YPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLLFKQFLKGEPMP 156
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 6e-05
Identities = 40/329 (12%), Positives = 88/329 (26%), Gaps = 120/329 (36%)
Query: 45 LTSYSSDIYAVAGHSA---LLNSPQDGLKDKD-----------KIESLPGQ-----PLGV 85
T + ++ + L+ L + + + LP + P +
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL 330
Query: 86 ---------------NFDQY----------SGYVNVDSQDGRSLFYYFVESPQNS--SSK 118
N+ S ++ + R +F P ++ +
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI 390
Query: 119 PL-VLWLNGGPGFSSFGAGTMM-ELGPFR-VNKDGKT-------LYQ------------- 155
L ++W + ++ +L + V K K +Y
Sbjct: 391 LLSLIWFDV----IKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446
Query: 156 ----NEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLA 211
+ Y K + + I D Y F+ S+ GH++ +
Sbjct: 447 RSIVDHYNIPKTFDSDDLIPPYLDQY-----------------FY----SHIGHHLKNIE 485
Query: 212 QA-------ILYNNQHANQTIINLRGIAMG------NALIDLETMMKGTVDFYWTHALMP 258
+++ + + I A N L L+ FY +
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLK--------FYKPYICDN 537
Query: 259 DEIYHGLTSSY-NFASLNSSDKVCLEFID 286
D Y L ++ +F + +C ++ D
Sbjct: 538 DPKYERLVNAILDFLPKIEENLICSKYTD 566
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 432 | |||
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 100.0 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 100.0 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 100.0 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 100.0 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 100.0 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 100.0 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 100.0 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 100.0 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 98.83 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 98.8 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 98.77 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 98.74 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 98.74 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 98.74 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 98.72 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 98.71 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 98.68 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 98.67 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 98.64 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 98.63 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 98.63 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 98.63 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 98.62 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 98.61 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 98.61 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 98.61 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 98.6 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 98.58 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 98.56 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 98.54 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 98.54 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 98.54 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 98.53 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 98.53 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 98.52 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 98.52 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 98.52 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 98.51 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 98.5 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 98.5 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 98.5 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 98.5 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 98.48 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 98.47 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 98.47 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 98.46 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 98.45 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 98.44 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 98.44 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 98.43 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 98.42 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 98.4 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 98.4 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 98.4 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 98.39 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 98.39 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 98.39 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 98.38 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 98.38 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 98.38 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 98.37 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 98.36 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 98.36 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 98.36 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 98.35 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 98.35 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 98.35 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 98.34 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 98.33 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 98.32 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 98.31 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 98.31 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 98.31 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 98.31 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 98.29 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 98.27 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 98.27 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 98.26 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 98.26 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 98.22 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 98.22 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 98.22 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 98.21 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 98.2 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 98.2 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 98.2 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 98.19 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 98.18 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 98.18 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.17 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 98.17 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 98.16 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 98.14 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 98.13 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 98.13 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 98.12 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 98.11 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 98.11 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 98.1 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 98.09 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 98.08 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 98.07 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 98.05 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 98.05 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 98.04 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 98.04 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 98.04 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 98.04 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.02 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 98.0 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 98.0 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 98.0 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 97.98 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 97.98 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 97.96 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 97.95 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 97.95 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 97.95 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 97.94 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 97.94 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 97.94 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 97.93 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 97.92 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 97.91 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 97.89 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 97.89 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 97.88 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 97.87 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 97.87 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 97.09 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 97.83 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 97.8 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 97.79 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 97.78 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 97.76 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 97.76 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 97.72 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 97.68 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 97.66 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 97.64 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 97.56 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 97.52 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 97.52 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 97.46 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 97.45 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 97.39 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 97.39 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 97.37 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 97.32 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 97.3 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 97.23 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 97.21 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 97.16 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 97.13 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 97.12 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 97.11 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 97.08 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 97.01 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 96.96 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 96.71 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 96.68 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 96.65 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 96.58 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 96.58 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 96.57 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 96.52 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 96.5 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 96.49 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 96.4 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 96.25 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 95.94 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 95.9 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 95.86 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 95.8 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 95.75 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 95.51 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 95.22 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 95.22 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 95.22 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 95.2 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 95.12 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 95.11 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 95.05 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 94.98 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 94.98 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 94.96 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 94.87 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 94.83 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 94.62 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 94.59 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 94.42 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 94.35 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 94.32 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 94.12 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 93.85 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 93.64 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 93.4 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 93.08 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 92.19 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 92.13 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 92.02 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 91.75 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 91.62 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 91.58 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 91.51 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 91.49 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 91.07 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 90.94 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 90.56 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 90.07 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 90.02 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 89.97 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 89.88 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 89.44 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 89.24 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 89.2 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 89.14 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 87.23 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 86.36 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 86.12 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 84.02 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 83.67 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 83.1 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 82.93 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 81.9 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 81.63 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 81.25 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 80.11 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 80.1 |
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-88 Score=692.82 Aligned_cols=349 Identities=33% Similarity=0.650 Sum_probs=308.4
Q ss_pred cCCccccCCCCCCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCCC
Q 042005 71 DKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDG 150 (432)
Q Consensus 71 ~~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~~ 150 (432)
++|+|++|||++.++++++|||||+|++ +++||||||||+++|+++||||||||||||||+ .|+|.|+|||+++.++
T Consensus 3 ~~d~V~~LPg~~~~~~~~~~sGyv~v~~--~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~-~g~~~e~GP~~~~~~~ 79 (452)
T 1ivy_A 3 DQDEIQRLPGLAKQPSFRQYSGYLKSSG--SKHLHYWFVESQKDPENSPVVLWLNGGPGCSSL-DGLLTEHGPFLVQPDG 79 (452)
T ss_dssp TTTBCSSCTTCSSCCSSCEEEEEEECST--TEEEEEEEECCSSCGGGSCEEEEECCTTTBCTH-HHHHTTTSSEEECTTS
T ss_pred ccCccccCCCCCCCCCceeeEEEEeeCC--CCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HHHHHhcCCcEEeCCC
Confidence 5789999999998889999999999974 589999999999999999999999999999999 5999999999999988
Q ss_pred CeeecCCCCCCC---------------CCc-----ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHH
Q 042005 151 KTLYQNEYAWNK---------------DYK-----VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQL 210 (432)
Q Consensus 151 ~~l~~N~~SW~~---------------~~~-----~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~l 210 (432)
.+++.||+||++ +|. .++++++|+|+++||++||++||+|++++|||+||||||+|||++
T Consensus 80 ~~l~~n~~sw~~~~~~lfiDqP~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~l 159 (452)
T 1ivy_A 80 VTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTL 159 (452)
T ss_dssp SCEEECTTCGGGSSEEEEECCSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHH
T ss_pred ceeeeCCCcccccccEEEEecCCCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHH
Confidence 889999999999 221 135678999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhhhccccc----CCCChHHHHHHHH
Q 042005 211 AQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFAS----LNSSDKVCLEFID 286 (432)
Q Consensus 211 A~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~----~~~~~~~C~~~~~ 286 (432)
|.+|+++ ..+|||||+||||++||..+..++++|+|.||+|++++++.+++.|.... .......|..+++
T Consensus 160 a~~i~~~------~~~~l~g~~ign~~~d~~~~~~~~~~~~~~~glis~~~~~~~~~~c~~~~~~~~~~~~~~~C~~~~~ 233 (452)
T 1ivy_A 160 AVLVMQD------PSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQ 233 (452)
T ss_dssp HHHHTTC------TTSCEEEEEEESCCSBHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHEETTEECCSSCCCHHHHHHHH
T ss_pred HHHHHhc------CccccceEEecCCccChhhhhhhHHHHHhhhhcCCHHHHHHHHHHhhhcccccccccchHHHHHHHH
Confidence 9999853 36999999999999999999999999999999999999999999886421 1134567998888
Q ss_pred HHHHhc--CCCcccccCCCcCCCCC--------------------------------------------Cc-C----CCC
Q 042005 287 QGDAAA--GNIYSYDIYAPLCNSSS--------------------------------------------KF-N----TEI 315 (432)
Q Consensus 287 ~~~~~~--g~~n~Ydi~~~~c~~~~--------------------------------------------~~-~----~pY 315 (432)
.+.+.. +++|+|||+.+ |.... .+ . ..|
T Consensus 234 ~~~~~~~~~~in~Y~i~~~-C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~~~~~~~y 312 (452)
T 1ivy_A 234 EVARIVGNSGLNIYNLYAP-CAGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTY 312 (452)
T ss_dssp HHHHHHHSSSCCTTCTTSC-CTTCCSSSEEEETTEEEECCCSCSSTTSCCCCCCGGGHHHHTCEEEECCTTCCCHHHHHH
T ss_pred HHHHHHhcCCCcccccccc-cccccccccchhcccccccccchhhhhhhhccccccccccccccccCCCCccchHHHHHH
Confidence 887754 89999999875 74210 11 0 129
Q ss_pred cCccc---cc------cccc-----------cCCCCcHHHHHHHHHc-CCeEEEEecCCccccCchhHHHHHHhcCCCCC
Q 042005 316 ANSGE---IN------RNWK-----------DKPQTVLPIIQELMAE-GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVR 374 (432)
Q Consensus 316 LN~~~---~~------~~w~-----------d~~~~~~~~l~~LL~~-girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~ 374 (432)
||+++ ++ ..|. +.+.++++.+++||++ |+|||||+||+|++||+.||++|+++|+|++.
T Consensus 313 lN~~~Vq~ALhv~~~~~~W~~Cs~~V~~~~~~~~~s~~~~~~~LL~~~girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~ 392 (452)
T 1ivy_A 313 LNNPYVRKALNIPEQLPQWDMCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKME 392 (452)
T ss_dssp HTSHHHHHHTTCCTTSCCCCSBCHHHHHHCBCCCSBSHHHHHHHHHHTCCEEEEEEETTCSSSCHHHHHHHHHHTCCCEE
T ss_pred hCcHHHHHHcCCCCCCCccccCcHHHHhhhhcccccHHHHHHHHHhccCceEEEEeCCCCccCCcHHHHHHHHhcCCccc
Confidence 99997 11 2354 4567889999999998 99999999999999999999999999999999
Q ss_pred ccceeeeec-C----eeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHHHHcCCCC
Q 042005 375 TAWYPWYTQ-G----EVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFINGTLP 429 (432)
Q Consensus 375 ~~~~~w~~~-~----~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~ 429 (432)
.+|++|+++ + +++||+|+|+||||++|++||||||+|||++|++||++||.|++|
T Consensus 393 ~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~al~m~~~fl~g~~l 452 (452)
T 1ivy_A 393 VQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQPY 452 (452)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHHHHHHHHHTTCCC
T ss_pred ccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHHHHHHHHHhcCCCC
Confidence 999999986 5 999999999999999999999999999999999999999999886
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-85 Score=666.83 Aligned_cols=339 Identities=29% Similarity=0.494 Sum_probs=285.0
Q ss_pred CCCCCCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCCCCeeecCC
Q 042005 78 LPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNE 157 (432)
Q Consensus 78 lpg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~~~~l~~N~ 157 (432)
.+|++ .++++|||||+|++ .+++||||||||+++|+++||||||||||||||+ .|+|+|+|||+++.+. +++.||
T Consensus 7 ~~g~~--~~~~~ysGYv~v~~-~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS~-~g~~~e~GP~~~~~~~-~l~~n~ 81 (421)
T 1cpy_A 7 ILGID--PNVTQYTGYLDVED-EDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSL-TGLFFALGPSSIGPDL-KPIGNP 81 (421)
T ss_dssp GSSSC--CSSCCCEEEEEETT-TTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTH-HHHTTTTSSEEEETTT-EEEECT
T ss_pred ccCCC--CCCceeEEEEEcCC-CCcEEEEEEEEeCCCCCCCCEEEEECCCCchHhH-HHHHHccCCcEECCCC-ceeECC
Confidence 45554 46899999999985 5799999999999999999999999999999999 5999999999998775 799999
Q ss_pred CCCCC---------------CCc----ccCChhhHHHHHHHHHHHHHHCCCCCC--CCeEEEccccccccchHHHHHHHH
Q 042005 158 YAWNK---------------DYK----VNGDIRTARDSYTFLVSWLARFPEYKT--RDFFIAGESYAGHYIPQLAQAILY 216 (432)
Q Consensus 158 ~SW~~---------------~~~----~~~~~~~a~d~~~fL~~F~~~fP~~~~--~~~yI~GESYaG~yvP~lA~~I~~ 216 (432)
||||+ +|. ..+++++|+|++.||+.||++||+|+. +||||+||||||||||+||++|++
T Consensus 82 ~sW~~~an~lfiDqPvGtGfSy~~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~ 161 (421)
T 1cpy_A 82 YSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILS 161 (421)
T ss_dssp TCGGGGSEEECCCCSTTSTTCEESSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTT
T ss_pred cccccccCEEEecCCCcccccCCCCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHh
Confidence 99999 221 235678999999999999999999999 999999999999999999999999
Q ss_pred hccccccceeeeeeeEeccccccccccchhhHHHHHhcC----CCCHHHHHhHhh---hccccc----CCCC-------h
Q 042005 217 NNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHA----LMPDEIYHGLTS---SYNFAS----LNSS-------D 278 (432)
Q Consensus 217 ~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~g----lI~~~~~~~~~~---~C~~~~----~~~~-------~ 278 (432)
+|+ ..||||||+||||++||..|..++.+|++.+| +|++++++.+.+ .|.... .... .
T Consensus 162 ~n~----~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~g~~~~li~~~~~~~~~~~~~~c~~~i~~c~~~~~~~~c~~a~ 237 (421)
T 1cpy_A 162 HKD----RNFNLTSVLIGNGLTDPLTQYNYYEPMACGEGGEPSVLPSEECSAMEDSLERCLGLIESCYDSQSVWSCVPAT 237 (421)
T ss_dssp CSS----CSSCCCEEEEESCCCCHHHHGGGHHHHHTTCSSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred ccc----cccceeeEEecCcccChhhhhhhHHHHHhhcCCCCccCCHHHHHHHHHHHHHHHHHHHhhhcccccchhhHHH
Confidence 885 36999999999999999999999999999886 999999887654 243210 0012 2
Q ss_pred HHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcC------CCCcCccc---cc----cccc--------------cCCCC
Q 042005 279 KVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFN------TEIANSGE---IN----RNWK--------------DKPQT 331 (432)
Q Consensus 279 ~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~------~pYLN~~~---~~----~~w~--------------d~~~~ 331 (432)
..|..++...... .++|+|||+.+ |.....+. ..|||+++ ++ ..|. |.+.+
T Consensus 238 ~~c~~~~~~~~~~-~~~n~Ydi~~~-c~~~~~c~~~~~~~~~ylN~~~V~~AL~v~~~~w~~cs~~V~~~~~~~~d~~~p 315 (421)
T 1cpy_A 238 IYCNNAQLAPYQR-TGRNVYDIRKD-CEGGNLCYPTLQDIDDYLNQDYVKEAVGAEVDHYESCNFDINRNFLFAGDWMKP 315 (421)
T ss_dssp HHHHHHHTHHHHH-HCCBTTBSSSC-CCSSSCSSTHHHHHHHHHHSHHHHHHTTCCCSCCCSBCHHHHHHHHTTTGGGSC
T ss_pred HHHHHHHHHHHhc-CCCChhhcccc-CCCCCccccchhHHHHHhCCHHHHHHhCCCCCceEECchhHhhhhhhcCCcccc
Confidence 3344333333333 36899999875 75432221 24999988 22 2365 33456
Q ss_pred cHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCc-----cceeeee--cCeeeeEEEEecceEEEEEcCC
Q 042005 332 VLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRT-----AWYPWYT--QGEVGGYAVGYQNLTFVTVRGA 404 (432)
Q Consensus 332 ~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~-----~~~~w~~--~~~~~G~~k~~~nLTf~~V~~A 404 (432)
..+.++.||++|+|||||+||+|++||+.||++|+++|+|++++ +|++|++ +++++||+|+|+||||++|++|
T Consensus 316 ~~~~l~~LL~~girVlIysGd~D~i~~~~Gt~~wi~~L~w~~~~~F~~a~~~~w~~~~~~~vaG~~~~~~~Ltf~~V~~A 395 (421)
T 1cpy_A 316 YHTAVTDLLNQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNG 395 (421)
T ss_dssp THHHHHHHHHTTCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEECEETTEEEEEETTC
T ss_pred hHHHHHHHHhcCCeEEEEECCcccccChHHHHHHHHhccCccchhhhhccccceEEcCCCceeeEEEEeccEEEEEECCC
Confidence 67788999999999999999999999999999999999999986 7999998 7899999999999999999999
Q ss_pred cccccccChHHHHHHHHHHHcCC
Q 042005 405 GHFVPSYQPARALVLFSSFINGT 427 (432)
Q Consensus 405 GHmvP~dqP~~a~~m~~~fl~~~ 427 (432)
|||||+|||++|++||++||.|+
T Consensus 396 GHmVP~dqP~~al~m~~~fl~g~ 418 (421)
T 1cpy_A 396 GHMVPFDVPENALSMVNEWIHGG 418 (421)
T ss_dssp CSSHHHHCHHHHHHHHHHHHTTT
T ss_pred cccCcccCHHHHHHHHHHHhcCc
Confidence 99999999999999999999886
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-86 Score=685.10 Aligned_cols=358 Identities=27% Similarity=0.436 Sum_probs=301.3
Q ss_pred cCCcccc--CCCCCCC----CCceeEEeeEEecCCC-------CceEEEEEEEcC--CCCCCCCeEEEEcCCCChhhhhH
Q 042005 71 DKDKIES--LPGQPLG----VNFDQYSGYVNVDSQD-------GRSLFYYFVESP--QNSSSKPLVLWLNGGPGFSSFGA 135 (432)
Q Consensus 71 ~~~~v~~--lpg~~~~----~~~~~ysGyl~v~~~~-------~~~lFywf~es~--~~p~~~PlilWlnGGPGcSSl~~ 135 (432)
++++|+. |||++.. ..+++|||||+|+++. +++||||||||+ ++|+++||+|||||||||||+ .
T Consensus 5 ~~~~V~~~~LPg~~~~~~~~~~~~~~aG~~~v~~~~~~~~~~~~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~-~ 83 (483)
T 1ac5_A 5 EEYKVAYELLPGLSEVPDPSNIPQMHAGHIPLRSEDADEQDSSDLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSM-D 83 (483)
T ss_dssp GGTBCCGGGSTTGGGCSCTTSSCEEEEEEEECSCSSSCSSCCCCCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTH-H
T ss_pred ccceecCCCCCCCCCCcccCCCceeEEEEEecCccccccccCCCceEEEEEEEecCCCCCcCCCEEEEECCCCchHhh-h
Confidence 4677888 9999742 3579999999998655 789999999998 689999999999999999999 5
Q ss_pred hhhhhcCCeEEcCCCCeeecCCCCCCC---------------CCcc-------------cCChhhHHHHHHHHHHHHHHC
Q 042005 136 GTMMELGPFRVNKDGKTLYQNEYAWNK---------------DYKV-------------NGDIRTARDSYTFLVSWLARF 187 (432)
Q Consensus 136 G~f~E~GP~~~~~~~~~l~~N~~SW~~---------------~~~~-------------~~~~~~a~d~~~fL~~F~~~f 187 (432)
|+|.|+|||+++.++ +++.|||||++ +|.. ++++++|++++.||++||++|
T Consensus 84 g~~~e~GP~~~~~~~-~l~~n~~sw~~~~n~lfiDqPvGtGfSy~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~f 162 (483)
T 1ac5_A 84 GALVESGPFRVNSDG-KLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIF 162 (483)
T ss_dssp HHHHSSSSEEECTTS-CEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHC
T ss_pred hhHhhcCCeEecCCC-ceeecccchhhcCCeEEEecCCCccccCCcCcccccccccccCCCHHHHHHHHHHHHHHHHHhC
Confidence 999999999999886 69999999999 2321 245689999999999999999
Q ss_pred CCCCCCCeEEEccccccccchHHHHHHHHhcccc--ccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHH--HH
Q 042005 188 PEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHA--NQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEI--YH 263 (432)
Q Consensus 188 P~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~--~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~--~~ 263 (432)
|+|++++|||+||||||||||++|++|+++|+.. ..++||||||+||||++||..|..++.+|+|.||+|++++ ++
T Consensus 163 P~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkGi~IGNg~~d~~~~~~~~~~f~~~~gli~~~~~~~~ 242 (483)
T 1ac5_A 163 PEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWIDPNTQSLSYLPFAMEKKLIDESNPNFK 242 (483)
T ss_dssp TTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCCHHHHHTTHHHHHHHTTSCCTTSTTHH
T ss_pred hhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceeeeEecCCcccchhhhccHHHHHHhCCCCCccHHHHH
Confidence 9999999999999999999999999999998753 2457999999999999999999999999999999999875 65
Q ss_pred hHh---hhcccc--cC------CCChHHHHHHHHHHHHhc---------CCCcccccCCC----cCCCCCCc----CCCC
Q 042005 264 GLT---SSYNFA--SL------NSSDKVCLEFIDQGDAAA---------GNIYSYDIYAP----LCNSSSKF----NTEI 315 (432)
Q Consensus 264 ~~~---~~C~~~--~~------~~~~~~C~~~~~~~~~~~---------g~~n~Ydi~~~----~c~~~~~~----~~pY 315 (432)
.+. +.|... .. ......|..+++.+.+.+ +++|.||++.+ .|...... ...|
T Consensus 243 ~~~~~~~~C~~~i~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~c~n~ydi~~~~~~~~c~~~~~~~~~~~~~y 322 (483)
T 1ac5_A 243 HLTNAHENCQNLINSASTDEAAHFSYQECENILNLLLSYTRESSQKGTADCLNMYNFNLKDSYPSCGMNWPKDISFVSKF 322 (483)
T ss_dssp HHHHHHHHHHHHHHHCCSGGGGSSSCHHHHTHHHHHHHHTCCCCTTSTTSEEETTEEEEEECTTTTTTTCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHhhcccccccccCcccccccccCCCCCcccccccchhHHHHH
Confidence 543 467531 11 123467998888776543 46789999752 34322110 0349
Q ss_pred cCccc---cc-------ccccc------------CCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCC
Q 042005 316 ANSGE---IN-------RNWKD------------KPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPV 373 (432)
Q Consensus 316 LN~~~---~~-------~~w~d------------~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~ 373 (432)
||+++ ++ ..|.. .++++++.++.||++|+|||||+||+|++||+.||++|+++|+|++
T Consensus 323 lN~~~Vq~ALhv~~~~~~~w~~Cs~~V~~~~~~d~~~~~~~~l~~LL~~girVLIYsGD~D~icn~~Gt~~~i~~L~W~g 402 (483)
T 1ac5_A 323 FSTPGVIDSLHLDSDKIDHWKECTNSVGTKLSNPISKPSIHLLPGLLESGIEIVLFNGDKDLICNNKGVLDTIDNLKWGG 402 (483)
T ss_dssp HTSTTHHHHTTCCTTTCCCCCSBCHHHHHHCCCSSCCCGGGGHHHHHHTTCEEEEEEETTCSTTCHHHHHHHHHHCEETT
T ss_pred hCCHHHHHHhCCCCCCCCCeeeCchhHHHHhcCCCcCcHHHHHHHHHhcCceEEEEECCcCcccCcHHHHHHHHhcCccc
Confidence 99998 12 15753 3567889999999999999999999999999999999999999998
Q ss_pred Cc------cceeeeecC-------eeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHHHHcCCCCC
Q 042005 374 RT------AWYPWYTQG-------EVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFINGTLPP 430 (432)
Q Consensus 374 ~~------~~~~w~~~~-------~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~~ 430 (432)
++ +|++|++++ +++||+|+|+||||++|++||||||+|||++|++||++||.+.+|.
T Consensus 403 ~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP~dqP~~al~m~~~fl~~~~l~ 472 (483)
T 1ac5_A 403 IKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVPFDKSLVSRGIVDIYSNDVMII 472 (483)
T ss_dssp EESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHHHHCHHHHHHHHHHHTTCCEEE
T ss_pred ccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCcchhHHHHHHHHHHHHCCcccc
Confidence 54 568998866 8999999999999999999999999999999999999999998874
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-66 Score=501.19 Aligned_cols=230 Identities=37% Similarity=0.717 Sum_probs=207.2
Q ss_pred cccCCccccCCCCCCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcC
Q 042005 69 LKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNK 148 (432)
Q Consensus 69 ~~~~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~ 148 (432)
+++.|+|++|||++.+++|++|||||+|++ ++|||||||||+++|+++||||||||||||||| .|+|+|+|||+++.
T Consensus 3 ap~~d~V~~LPG~~~~~~~~~ysGyv~v~~--~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS~-~g~~~E~GP~~~~~ 79 (300)
T 4az3_A 3 APDQDEIQRLPGLAKQPSFRQYSGYLKGSG--SKHLHYWFVESQKDPENSPVVLWLNGGPGCSSL-DGLLTEHGPFLVQP 79 (300)
T ss_dssp CCGGGBCCCCTTBSSCCSSCEEEEEEECST--TEEEEEEEECCSSCTTTSCEEEEECCTTTBCTH-HHHHHTTSSEEECT
T ss_pred CCCcCccccCcCcCCCCCcceeeeeeecCC--CCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HHHHhcCCCceecC
Confidence 457889999999998899999999999974 689999999999999999999999999999999 59999999999999
Q ss_pred CCCeeecCCCCCCC---------------CCc-----ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccch
Q 042005 149 DGKTLYQNEYAWNK---------------DYK-----VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIP 208 (432)
Q Consensus 149 ~~~~l~~N~~SW~~---------------~~~-----~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP 208 (432)
++.+++.||||||+ +|. .++++++|+|++.||++||++||+|++++|||+||||||||||
T Consensus 80 ~~~~l~~N~~sW~~~an~lfiD~PvGtGfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP 159 (300)
T 4az3_A 80 DGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIP 159 (300)
T ss_dssp TSSCEEECTTCGGGSSEEEEECCSTTSTTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHH
T ss_pred CCccccccCccHHhhhcchhhcCCCcccccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHH
Confidence 98889999999999 221 3467899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhhhccccc----CCCChHHHHHH
Q 042005 209 QLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFAS----LNSSDKVCLEF 284 (432)
Q Consensus 209 ~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~----~~~~~~~C~~~ 284 (432)
+||++|++++ +||||||+||||++||..|..++++|+|.||||++++++.+++.|.... ....+..|..+
T Consensus 160 ~~a~~i~~~~------~inLkG~~iGNg~~d~~~~~~~~~~fa~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~C~~~ 233 (300)
T 4az3_A 160 TLAVLVMQDP------SMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTN 233 (300)
T ss_dssp HHHHHHTTCT------TSCEEEEEEESCCSBHHHHHHHHHHHHHHTTSSCHHHHHHHHHHTEETTEECCSSCCCHHHHHH
T ss_pred HHHHHHHhCC------CcccccceecCCccCHHHhcchhHHHHhhcCcCCHHHHHHHHHHHHHhhccCcCCCCcHHHHHH
Confidence 9999999865 5999999999999999999999999999999999999999999886532 13455789999
Q ss_pred HHHHHHhc--CCCcccccCCCcCCCC
Q 042005 285 IDQGDAAA--GNIYSYDIYAPLCNSS 308 (432)
Q Consensus 285 ~~~~~~~~--g~~n~Ydi~~~~c~~~ 308 (432)
++.+.+.. +++|+|||+.+ |...
T Consensus 234 ~~~~~~~~~~~~~N~YdI~~~-C~~~ 258 (300)
T 4az3_A 234 LQEVARIVGNSGLNIYNLYAP-CAGG 258 (300)
T ss_dssp HHHHHHHHHSSSCCTTCTTSC-CTTC
T ss_pred HHHHHHHhccCCCChhhccCc-CCCC
Confidence 88887765 57999999986 7543
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-64 Score=479.94 Aligned_cols=230 Identities=50% Similarity=0.941 Sum_probs=210.5
Q ss_pred cCCccccCCCCCCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhH-hhhhhcCCeEEcCC
Q 042005 71 DKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGA-GTMMELGPFRVNKD 149 (432)
Q Consensus 71 ~~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~-G~f~E~GP~~~~~~ 149 (432)
++++|++|||++. +++++|||||+|+++.+++||||||||+++|+++||||||||||||||+ . |+|+|+|||+++.+
T Consensus 2 ~~~~V~~lpG~~~-~~~~~~sGy~~v~~~~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS~-~~g~~~E~GP~~v~~~ 79 (255)
T 1whs_A 2 AADRIARLPGQPA-VDFDMYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSV-AYGASEELGAFRVKPR 79 (255)
T ss_dssp TTTBCCCCTTCCC-CSSCEEEEEEEEETTTTEEEEEEEECCCGGGCSCCEEEEECCTTTBCTT-TTHHHHTSSSEEECGG
T ss_pred CcCeeecCCCCCC-CCceEEEEEEECCCCCCcEEEEEEEEecCCCCCCCEEEEECCCCchHHH-HHHHHhccCCeEecCC
Confidence 3678999999986 8899999999999777899999999999999999999999999999999 6 99999999999988
Q ss_pred CCeeecCCCCCCC---------------CCc-------ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccc
Q 042005 150 GKTLYQNEYAWNK---------------DYK-------VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYI 207 (432)
Q Consensus 150 ~~~l~~N~~SW~~---------------~~~-------~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yv 207 (432)
+.+++.||+|||+ +|. .++++++|+|+++||+.||++||+|+++||||+|||||||||
T Consensus 80 ~~~l~~N~~sW~~~anvlfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yv 159 (255)
T 1whs_A 80 GAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYV 159 (255)
T ss_dssp GCCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHH
T ss_pred CCeeeeCcccccccCCEEEEecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccH
Confidence 8889999999999 111 257789999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHH
Q 042005 208 PQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQ 287 (432)
Q Consensus 208 P~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~ 287 (432)
|.+|++|+++| +..||||||+||||++||..+..++.+|++.||+|++++++.+++.|........+..|..+++.
T Consensus 160 p~la~~i~~~n----~~~inLkGi~ign~~~d~~~~~~~~~~~a~~~gli~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~ 235 (255)
T 1whs_A 160 PELSQLVHRSK----NPVINLKGFMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAATDV 235 (255)
T ss_dssp HHHHHHHHHHT----CSSCEEEEEEEEEECCBHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHTTSCSSSCCHHHHHHHHH
T ss_pred HHHHHHHHHcC----CcccccceEEecCCccCHHHhhhhHHHHHHHcCCCCHHHHHHHHHhccccccCCchHHHHHHHHH
Confidence 99999999998 24799999999999999999999999999999999999999999999865323456789999999
Q ss_pred HHHhcCCCcccccCCCcCC
Q 042005 288 GDAAAGNIYSYDIYAPLCN 306 (432)
Q Consensus 288 ~~~~~g~~n~Ydi~~~~c~ 306 (432)
+.+.++++|+|||+.+.|.
T Consensus 236 ~~~~~~~in~YdI~~~~C~ 254 (255)
T 1whs_A 236 ATAEQGNIDMYSLYTPVCN 254 (255)
T ss_dssp HHHHHCSSCTTSTTSCCCC
T ss_pred HHHHhCCCChhhcCCCCCC
Confidence 9988899999999987784
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-63 Score=474.06 Aligned_cols=241 Identities=44% Similarity=0.850 Sum_probs=214.4
Q ss_pred cCCccccCCCCCCCCCceeEEeeEEecCCCCceEEEEEEEc-CCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCC
Q 042005 71 DKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVES-PQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKD 149 (432)
Q Consensus 71 ~~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es-~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~ 149 (432)
+.++|++|||++.++++++|||||+|+++.+++|||||||| +++|+++||||||||||||||+.+|+|+|+|||+++.+
T Consensus 6 ~~~~V~~lpG~~~~~~~~~~sGyv~v~~~~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~ 85 (270)
T 1gxs_A 6 EDDRILGLPGQPNGVAFGMYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTN 85 (270)
T ss_dssp HHHBCCCCTTCCSCCCSCEEEEEEEEETTTTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTT
T ss_pred ccCccccCCCCCCCCCceEEEEEEEcCCCCCcEEEEEEEEecCCCCCCCCEEEEecCCCcccchhhhhHHhccCceecCC
Confidence 46789999999866889999999999987789999999999 88999999999999999999993399999999999998
Q ss_pred CCeeecCCCCCCC---------------CCc------ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccch
Q 042005 150 GKTLYQNEYAWNK---------------DYK------VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIP 208 (432)
Q Consensus 150 ~~~l~~N~~SW~~---------------~~~------~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP 208 (432)
+.+++.||||||+ +|. .++|+++|+|+++||+.||++||+|+++||||+||| |||||
T Consensus 86 ~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES--G~yvP 163 (270)
T 1gxs_A 86 GESLLLNEYAWNKAANILFAESPAGVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES--GHFIP 163 (270)
T ss_dssp SSCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC--TTHHH
T ss_pred CCcceeCccchhccccEEEEeccccccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC--CcchH
Confidence 8889999999999 221 246778999999999999999999999999999999 89999
Q ss_pred HHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHH
Q 042005 209 QLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQG 288 (432)
Q Consensus 209 ~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~ 288 (432)
++|++|+++|++ +..||||||+||||++||..+..++.+|+|.||+|++++++.+++.|........+..|..+++.+
T Consensus 164 ~la~~i~~~n~~--~~~inLkGi~ign~~~d~~~~~~~~~~~a~~~gli~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~ 241 (270)
T 1gxs_A 164 QLSQVVYRNRNN--SPFINFQGLLVSSGLTNDHEDMIGMFESWWHHGLISDETRDSGLKVCPGTSFMHPTPECTEVWNKA 241 (270)
T ss_dssp HHHHHHHHTTTT--CTTCEEEEEEEESCCCBHHHHHHHHHHHHHHTTCSCHHHHHHHHHHSTTCCSSSCCHHHHHHHHHH
T ss_pred HHHHHHHhcccc--ccceeeeeEEEeCCccChhhhhhhHHHHHHhcCCCCHHHHHHHHHHhcccccCCchHHHHHHHHHH
Confidence 999999999864 457999999999999999999999999999999999999999999998753224557899999999
Q ss_pred HHhcCCCcccccCCCcCCCCCCcCCCCcCc
Q 042005 289 DAAAGNIYSYDIYAPLCNSSSKFNTEIANS 318 (432)
Q Consensus 289 ~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~ 318 (432)
.+.++++|+|||+.+.|.... .||+.|
T Consensus 242 ~~~~~~in~YdI~~~~c~~~~---~~~~~~ 268 (270)
T 1gxs_A 242 LAEQGNINPYTIYTPTCDREP---SPYQRR 268 (270)
T ss_dssp HHHTTTSCTTSTTSCCCCCSS---CSCCSC
T ss_pred HHHhCCCChhhcCCCCCCCCC---chhhhh
Confidence 988999999999998885322 456554
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=253.71 Aligned_cols=108 Identities=50% Similarity=1.055 Sum_probs=103.4
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeec---CeeeeEEEEecceEEEEE
Q 042005 325 WKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQ---GEVGGYAVGYQNLTFVTV 401 (432)
Q Consensus 325 w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~---~~~~G~~k~~~nLTf~~V 401 (432)
|.+.++++++.++.||++|+|||||+||+|++||+.||++|+++|+|++.++|++|+++ ++++||+|+|+||||++|
T Consensus 48 ~~d~~~~~~~~~~~Ll~~girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V 127 (158)
T 1gxs_B 48 WGQAADDLLPVYRELIQAGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTV 127 (158)
T ss_dssp CCCCCSBCHHHHHHHHHTTCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEE
T ss_pred hhhccccHHHHHHHHHHcCCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEE
Confidence 44667789999999999999999999999999999999999999999999999999998 899999999999999999
Q ss_pred cCCcccccccChHHHHHHHHHHHcCCCCCCC
Q 042005 402 RGAGHFVPSYQPARALVLFSSFINGTLPPPA 432 (432)
Q Consensus 402 ~~AGHmvP~dqP~~a~~m~~~fl~~~~~~~~ 432 (432)
++||||||+|||++|++||++||.|+++|++
T Consensus 128 ~~AGHmVP~dqP~~al~m~~~fl~g~~l~~~ 158 (158)
T 1gxs_B 128 RGAGHLVPVHRPAQAFLLFKQFLKGEPMPAE 158 (158)
T ss_dssp TTCCSSHHHHCHHHHHHHHHHHHHTCCCCCC
T ss_pred CCCcccCcccCcHHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999999999874
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-34 Score=251.47 Aligned_cols=108 Identities=54% Similarity=1.082 Sum_probs=103.7
Q ss_pred ccccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcC
Q 042005 324 NWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRG 403 (432)
Q Consensus 324 ~w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~ 403 (432)
.|.|.++++++.++.||++|+|||||+||+|++||+.||++|+++|+|++.++|++|+++++++||+|+|+||||++|++
T Consensus 45 ~~~d~~~s~~~~~~~Ll~~girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~ 124 (153)
T 1whs_B 45 HWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRG 124 (153)
T ss_dssp SCCCCCSBCHHHHHHHHHTTCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETT
T ss_pred hhhhccccHHHHHHHHHhcCceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECC
Confidence 34466778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccChHHHHHHHHHHHcCCCCCC
Q 042005 404 AGHFVPSYQPARALVLFSSFINGTLPPP 431 (432)
Q Consensus 404 AGHmvP~dqP~~a~~m~~~fl~~~~~~~ 431 (432)
||||||+|||++|++||++||.|+++|+
T Consensus 125 AGHmVP~dqP~~a~~m~~~fl~~~~l~~ 152 (153)
T 1whs_B 125 AGHEVPLHRPRQALVLFQYFLQGKPMPG 152 (153)
T ss_dssp CCSSHHHHSHHHHHHHHHHHHHTCCCCC
T ss_pred CcccCcccCHHHHHHHHHHHHCCCCCCC
Confidence 9999999999999999999999999986
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=248.44 Aligned_cols=96 Identities=27% Similarity=0.567 Sum_probs=91.4
Q ss_pred HHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeee-----cCeeeeEEEEecceEEEEEcCCcccc
Q 042005 334 PIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYT-----QGEVGGYAVGYQNLTFVTVRGAGHFV 408 (432)
Q Consensus 334 ~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~-----~~~~~G~~k~~~nLTf~~V~~AGHmv 408 (432)
..++.|+++|+|||||+||+|++||+.|+++|+++|+|+++.+|++|+. ++++|||+|+|+||||++|++|||||
T Consensus 54 ~~~~~Ll~~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmV 133 (155)
T 4az3_B 54 QYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMV 133 (155)
T ss_dssp HHHHHHHTCCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCH
T ss_pred HHHHHHHHcCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcC
Confidence 4677888999999999999999999999999999999999999999975 36899999999999999999999999
Q ss_pred cccChHHHHHHHHHHHcCCCC
Q 042005 409 PSYQPARALVLFSSFINGTLP 429 (432)
Q Consensus 409 P~dqP~~a~~m~~~fl~~~~~ 429 (432)
|+|||++|++||++||+|+||
T Consensus 134 P~dqP~~al~m~~~fl~g~pF 154 (155)
T 4az3_B 134 PTDKPLAAFTMFSRFLNKQPY 154 (155)
T ss_dssp HHHCHHHHHHHHHHHHTTCCC
T ss_pred hhhCHHHHHHHHHHHHcCCCC
Confidence 999999999999999999997
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.83 E-value=6.3e-07 Score=84.37 Aligned_cols=62 Identities=15% Similarity=0.131 Sum_probs=49.2
Q ss_pred CCeEEEEecCCccccCchh----------------HHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcc
Q 042005 343 GIRIWVYSGDTDGALPVTC----------------TRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGH 406 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~G----------------t~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGH 406 (432)
..+||+.+|+.|.++|... .+.+.+.+ .+.++.++.+|||
T Consensus 238 ~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH 293 (315)
T 4f0j_A 238 QMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRI------------------------PQATLVEFPDLGH 293 (315)
T ss_dssp CSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHS------------------------TTEEEEEETTCCS
T ss_pred CCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhc------------------------CCceEEEeCCCCc
Confidence 5899999999999999432 23333332 3678899999999
Q ss_pred cccccChHHHHHHHHHHHcCCC
Q 042005 407 FVPSYQPARALVLFSSFINGTL 428 (432)
Q Consensus 407 mvP~dqP~~a~~m~~~fl~~~~ 428 (432)
+++.++|+...+.+.+||..++
T Consensus 294 ~~~~~~p~~~~~~i~~fl~~~~ 315 (315)
T 4f0j_A 294 TPQIQAPERFHQALLEGLQTQP 315 (315)
T ss_dssp CHHHHSHHHHHHHHHHHHCC--
T ss_pred chhhhCHHHHHHHHHHHhccCC
Confidence 9999999999999999997653
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=4.4e-06 Score=77.73 Aligned_cols=252 Identities=15% Similarity=0.163 Sum_probs=134.7
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhh----hhhcCC--eEEcCCCCeeecCCCCCCCCCcccCChhhH
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGT----MMELGP--FRVNKDGKTLYQNEYAWNKDYKVNGDIRTA 173 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~----f~E~GP--~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a 173 (432)
.+..+.|+.+...+ ..+|+||++.|++|++.. +.- |.+.|= +.++.-|......+ .....+-++.+
T Consensus 26 ~g~~l~~~~~~~~~--~~~~~vv~~hG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-----~~~~~~~~~~~ 97 (303)
T 3pe6_A 26 DGQYLFCRYWAPTG--TPKALIFVSHGAGEHSGR-YEELARMLMGLDLLVFAHDHVGHGQSEGE-----RMVVSDFHVFV 97 (303)
T ss_dssp TSCEEEEEEECCSS--CCSEEEEEECCTTCCGGG-GHHHHHHHHHTTEEEEEECCTTSTTSCSS-----TTCCSSTHHHH
T ss_pred CCeEEEEEEeccCC--CCCeEEEEECCCCchhhH-HHHHHHHHHhCCCcEEEeCCCCCCCCCCC-----CCCCCCHHHHH
Confidence 46789999987653 457999999999887775 333 333341 12222221111100 11112445678
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHh
Q 042005 174 RDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWT 253 (432)
Q Consensus 174 ~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~ 253 (432)
+|+..+++..-..++ ..+++|+|+|+|| .+|..+..... -.++++++.+|.................
T Consensus 98 ~d~~~~l~~l~~~~~---~~~~~l~G~S~Gg----~~a~~~a~~~p------~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 164 (303)
T 3pe6_A 98 RDVLQHVDSMQKDYP---GLPVFLLGHSMGG----AIAILTAAERP------GHFAGMVLISPLVLANPESATTFKVLAA 164 (303)
T ss_dssp HHHHHHHHHHHHHST---TCCEEEEEETHHH----HHHHHHHHHST------TTCSEEEEESCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccC---CceEEEEEeCHHH----HHHHHHHHhCc------ccccEEEEECccccCchhccHHHHHHHH
Confidence 888888887777654 4689999999999 45555555432 2589999999987664332211110000
Q ss_pred cCCCCHHHHHhHhhhccccc----CCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCC
Q 042005 254 HALMPDEIYHGLTSSYNFAS----LNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKP 329 (432)
Q Consensus 254 ~glI~~~~~~~~~~~C~~~~----~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~ 329 (432)
.....+........ ...... .....+... ....... .. ..|....
T Consensus 165 ------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~~-----~~------------~~~~~~~ 213 (303)
T 3pe6_A 165 ------KVLNSVLPNLSSGPIDSSVLSRNK---TEVDIYNSD-----PLICRAG-----LK------------VCFGIQL 213 (303)
T ss_dssp ------HHHHTTCCSCCCCCCCGGGTCSCH---HHHHHHHTC-----TTSCCSC-----CC------------HHHHHHH
T ss_pred ------HHHHHhcccccCCccchhhhhcch---hHHHHhccC-----ccccccc-----hh------------hhhHHHH
Confidence 00000000000000 000001 011111100 0000000 00 0000000
Q ss_pred CCcHHHHHHHH-HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccc
Q 042005 330 QTVLPIIQELM-AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFV 408 (432)
Q Consensus 330 ~~~~~~l~~LL-~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmv 408 (432)
......+...+ +-..+||+.+|..|.+++....+.+.+.+. ..+.+++++.++||+.
T Consensus 214 ~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~gH~~ 271 (303)
T 3pe6_A 214 LNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAK----------------------SQDKTLKIYEGAYHVL 271 (303)
T ss_dssp HHHHHHHHHHGGGCCSCEEEEEETTCSSBCHHHHHHHHHHCC----------------------CSSEEEEEETTCCSCG
T ss_pred HHHHHHHHHHhhcCCCCEEEEeeCCCCCCChHHHHHHHHhcc----------------------cCCceEEEeCCCccce
Confidence 00011222223 236899999999999999988888887764 1257889999999999
Q ss_pred cccChHHHHHH---HHHHHc
Q 042005 409 PSYQPARALVL---FSSFIN 425 (432)
Q Consensus 409 P~dqP~~a~~m---~~~fl~ 425 (432)
+.++|+...++ +.+|+.
T Consensus 272 ~~~~p~~~~~~~~~~~~~l~ 291 (303)
T 3pe6_A 272 HKELPEVTNSVFHEINMWVS 291 (303)
T ss_dssp GGSCHHHHHHHHHHHHHHHH
T ss_pred eccchHHHHHHHHHHHHHHh
Confidence 99999866555 445554
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=98.77 E-value=7.1e-07 Score=82.14 Aligned_cols=60 Identities=15% Similarity=0.116 Sum_probs=52.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.++|....+.+.+.+. +.++.++.++||+++.++|+...+.+.+
T Consensus 208 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 263 (272)
T 3fsg_A 208 QFPFKIMVGRNDQVVGYQEQLKLINHNE------------------------NGEIVLLNRTGHNLMIDQREAVGFHFDL 263 (272)
T ss_dssp SSCEEEEEETTCTTTCSHHHHHHHTTCT------------------------TEEEEEESSCCSSHHHHTHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCcCCHHHHHHHHHhcC------------------------CCeEEEecCCCCCchhcCHHHHHHHHHH
Confidence 5899999999999999988877776643 4578999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 264 fl~~ 267 (272)
T 3fsg_A 264 FLDE 267 (272)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9853
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.74 E-value=6e-07 Score=82.75 Aligned_cols=58 Identities=14% Similarity=0.134 Sum_probs=51.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.++|....+.+.+.+. +.+++++.++||+++.++|+...+.+.+
T Consensus 221 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 276 (278)
T 3oos_A 221 KIPSFIYCGKHDVQCPYIFSCEIANLIP------------------------NATLTKFEESNHNPFVEEIDKFNQFVND 276 (278)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHST------------------------TEEEEEETTCSSCHHHHSHHHHHHHHHH
T ss_pred CCCEEEEEeccCCCCCHHHHHHHHhhCC------------------------CcEEEEcCCcCCCcccccHHHHHHHHHh
Confidence 5899999999999999988888877753 5578999999999999999999999998
Q ss_pred HH
Q 042005 423 FI 424 (432)
Q Consensus 423 fl 424 (432)
||
T Consensus 277 fl 278 (278)
T 3oos_A 277 TL 278 (278)
T ss_dssp TC
T ss_pred hC
Confidence 85
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=98.74 E-value=8.5e-07 Score=82.02 Aligned_cols=59 Identities=12% Similarity=0.110 Sum_probs=50.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||.+|+.|.++|....+.+.+.+. +.+++++.+|||+++.++|+...+.+.+
T Consensus 196 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 251 (254)
T 2ocg_A 196 QCPALIVHGEKDPLVPRFHADFIHKHVK------------------------GSRLHLMPEGKHNLHLRFADEFNKLAED 251 (254)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHST------------------------TCEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred cCCEEEEecCCCccCCHHHHHHHHHhCC------------------------CCEEEEcCCCCCchhhhCHHHHHHHHHH
Confidence 5899999999999999877766655543 4577899999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 252 fl~ 254 (254)
T 2ocg_A 252 FLQ 254 (254)
T ss_dssp HHC
T ss_pred HhC
Confidence 983
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=98.74 E-value=4.3e-07 Score=83.65 Aligned_cols=248 Identities=16% Similarity=0.212 Sum_probs=133.5
Q ss_pred EEeeEEe-cCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhh-----hHhhhhhcCCeE--EcCCCCeeecCCCCCC
Q 042005 90 YSGYVNV-DSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSF-----GAGTMMELGPFR--VNKDGKTLYQNEYAWN 161 (432)
Q Consensus 90 ysGyl~v-~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl-----~~G~f~E~GP~~--~~~~~~~l~~N~~SW~ 161 (432)
-..++++ ....+..++|+.....+ .++|+||++.|++|.+.. -.-.+.+.|=-. ++.-|......
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~--~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~----- 82 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQ--DERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGG----- 82 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSS--TTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCS-----
T ss_pred CcceEEEeeccCcceEEEEeccCCC--CCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCC-----
Confidence 3677888 22236789888765432 257999999999887431 013344556322 22222111100
Q ss_pred CCCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 162 KDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 162 ~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
.....+-++.++++..+++.. ...+++|+|+|+||..+-.+|..+.+ ... ..-.++++++.+|..+..
T Consensus 83 -~~~~~~~~~~~~d~~~~~~~l-------~~~~~~l~G~S~Gg~~a~~~a~~~~~-~p~---~~~~v~~~il~~~~~~~~ 150 (270)
T 3llc_A 83 -AFRDGTISRWLEEALAVLDHF-------KPEKAILVGSSMGGWIALRLIQELKA-RHD---NPTQVSGMVLIAPAPDFT 150 (270)
T ss_dssp -CGGGCCHHHHHHHHHHHHHHH-------CCSEEEEEEETHHHHHHHHHHHHHHT-CSC---CSCEEEEEEEESCCTTHH
T ss_pred -ccccccHHHHHHHHHHHHHHh-------ccCCeEEEEeChHHHHHHHHHHHHHh-ccc---cccccceeEEecCcccch
Confidence 011123344566665555532 25689999999999655555554322 210 004799999999987643
Q ss_pred ccchhhHHHHHhcCCCCHHHHHhHhhhcccccC----CCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcC
Q 042005 242 TMMKGTVDFYWTHALMPDEIYHGLTSSYNFASL----NSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIAN 317 (432)
Q Consensus 242 ~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~----~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN 317 (432)
... .+ ..+.......+......... ................ +++.
T Consensus 151 ~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---------------- 199 (270)
T 3llc_A 151 SDL------IE--PLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRA-------NRVM---------------- 199 (270)
T ss_dssp HHT------TG--GGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHH-------TCCT----------------
T ss_pred hhh------hh--hhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhh-------hhhh----------------
Confidence 221 00 11122222222111100000 0000000000000000 0000
Q ss_pred ccccccccccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceE
Q 042005 318 SGEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLT 397 (432)
Q Consensus 318 ~~~~~~~w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLT 397 (432)
..+-.-..+||+.+|+.|.+++....+.+.+.+. + .+.+
T Consensus 200 -------------------~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~-------------~---------~~~~ 238 (270)
T 3llc_A 200 -------------------AGMIDTGCPVHILQGMADPDVPYQHALKLVEHLP-------------A---------DDVV 238 (270)
T ss_dssp -------------------TSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSC-------------S---------SSEE
T ss_pred -------------------hhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcC-------------C---------CCee
Confidence 0001124799999999999999998888888764 0 1378
Q ss_pred EEEEcCCcccccc-cChHHHHHHHHHHHcCCC
Q 042005 398 FVTVRGAGHFVPS-YQPARALVLFSSFINGTL 428 (432)
Q Consensus 398 f~~V~~AGHmvP~-dqP~~a~~m~~~fl~~~~ 428 (432)
+.++.++||+.+. +.++...+.+.+|+...|
T Consensus 239 ~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~p 270 (270)
T 3llc_A 239 LTLVRDGDHRLSRPQDIDRMRNAIRAMIEPRP 270 (270)
T ss_dssp EEEETTCCSSCCSHHHHHHHHHHHHHHHC---
T ss_pred EEEeCCCcccccccccHHHHHHHHHHHhcCCC
Confidence 8999999998765 678999999999997653
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.72 E-value=8.2e-06 Score=78.45 Aligned_cols=250 Identities=15% Similarity=0.144 Sum_probs=134.1
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHh----hhhhcCCeEEcCCCCeeecCCCCCCC--CCcccCChhhH
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAG----TMMELGPFRVNKDGKTLYQNEYAWNK--DYKVNGDIRTA 173 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G----~f~E~GP~~~~~~~~~l~~N~~SW~~--~~~~~~~~~~a 173 (432)
.+..+.|+.+...+ ..+|+||++.|++|.+.. +- .|.+.|=-.+..|- .-+..+. .....+-.+.+
T Consensus 44 dg~~l~~~~~~p~~--~~~p~vv~~HG~~~~~~~-~~~~~~~l~~~g~~vi~~D~-----~G~G~S~~~~~~~~~~~~~~ 115 (342)
T 3hju_A 44 DGQYLFCRYWKPTG--TPKALIFVSHGAGEHSGR-YEELARMLMGLDLLVFAHDH-----VGHGQSEGERMVVSDFHVFV 115 (342)
T ss_dssp TSCEEEEEEECCSS--CCSEEEEEECCTTCCGGG-GHHHHHHHHTTTEEEEEECC-----TTSTTSCSSTTCCSCTHHHH
T ss_pred CCeEEEEEEeCCCC--CCCcEEEEECCCCcccch-HHHHHHHHHhCCCeEEEEcC-----CCCcCCCCcCCCcCcHHHHH
Confidence 46789999987643 457999999999988875 33 33333411111111 1111111 11112445668
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHh
Q 042005 174 RDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWT 253 (432)
Q Consensus 174 ~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~ 253 (432)
+|+..+|...-..++ ..+++|+|+|+|| .+|..+..... -.++++++.+|..++.............
T Consensus 116 ~d~~~~l~~l~~~~~---~~~v~l~G~S~Gg----~~a~~~a~~~p------~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 182 (342)
T 3hju_A 116 RDVLQHVDSMQKDYP---GLPVFLLGHSMGG----AIAILTAAERP------GHFAGMVLISPLVLANPESATTFKVLAA 182 (342)
T ss_dssp HHHHHHHHHHHHHST---TCCEEEEEETHHH----HHHHHHHHHST------TTCSEEEEESCCCSCCTTTTSHHHHHHH
T ss_pred HHHHHHHHHHHHhCC---CCcEEEEEeChHH----HHHHHHHHhCc------cccceEEEECcccccchhhhhHHHHHHH
Confidence 888888887777654 4689999999999 45555554432 2589999999988765433221111100
Q ss_pred cCCCCHHHHHhHhhhccccc----CCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCC
Q 042005 254 HALMPDEIYHGLTSSYNFAS----LNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKP 329 (432)
Q Consensus 254 ~glI~~~~~~~~~~~C~~~~----~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~ 329 (432)
.....+...-.... ........ ...+.. +.+..... .. . .|....
T Consensus 183 ------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~-----~~-----------~-~~~~~~ 231 (342)
T 3hju_A 183 ------KVLNLVLPNLSLGPIDSSVLSRNKTE---VDIYNS-----DPLICRAG-----LK-----------V-CFGIQL 231 (342)
T ss_dssp ------HHHHHHCTTCBCCCCCGGGSCSCHHH---HHHHHT-----CTTCCCSC-----CB-----------H-HHHHHH
T ss_pred ------HHHHHhccccccCcccccccccchHH---HHHHhc-----Cccccccc-----cc-----------H-HHHHHH
Confidence 01111111000000 00011111 111110 00000000 00 0 000000
Q ss_pred CCcHHHHHHHH-HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccc
Q 042005 330 QTVLPIIQELM-AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFV 408 (432)
Q Consensus 330 ~~~~~~l~~LL-~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmv 408 (432)
......+...+ +-..+||+.+|+.|.+++....+.+.+.+. -.+..++++.++||+.
T Consensus 232 ~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~gH~~ 289 (342)
T 3hju_A 232 LNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAK----------------------SQDKTLKIYEGAYHVL 289 (342)
T ss_dssp HHHHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCC----------------------CSSEEEEEETTCCSCG
T ss_pred HHHHHHHHHHHHhCCcCEEEEEeCCCcccChHHHHHHHHHcC----------------------CCCceEEEECCCCchh
Confidence 00011222223 236899999999999999988888888764 0256789999999999
Q ss_pred cccChHHHHHHHHHH
Q 042005 409 PSYQPARALVLFSSF 423 (432)
Q Consensus 409 P~dqP~~a~~m~~~f 423 (432)
..++|+...++++.+
T Consensus 290 ~~~~~~~~~~~~~~~ 304 (342)
T 3hju_A 290 HKELPEVTNSVFHEI 304 (342)
T ss_dssp GGSCHHHHHHHHHHH
T ss_pred hcCChHHHHHHHHHH
Confidence 999998666654433
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.71 E-value=3.6e-06 Score=80.14 Aligned_cols=61 Identities=15% Similarity=0.199 Sum_probs=52.4
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+|||.+|+.|.+++....+++++++. .+.++.++.++||+++.++|+...+.+.
T Consensus 245 i~~P~lii~G~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 301 (306)
T 2r11_A 245 ARVPILLLLGEHEVIYDPHSALHRASSFV-----------------------PDIEAEVIKNAGHVLSMEQPTYVNERVM 301 (306)
T ss_dssp CCSCEEEEEETTCCSSCHHHHHHHHHHHS-----------------------TTCEEEEETTCCTTHHHHSHHHHHHHHH
T ss_pred CCCCEEEEEeCCCcccCHHHHHHHHHHHC-----------------------CCCEEEEeCCCCCCCcccCHHHHHHHHH
Confidence 35899999999999999877776776431 3567899999999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 302 ~fl~ 305 (306)
T 2r11_A 302 RFFN 305 (306)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9985
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=98.68 E-value=1.6e-06 Score=81.03 Aligned_cols=63 Identities=11% Similarity=0.131 Sum_probs=54.2
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
+-.++||+.+|..|.+++....+.+.+.+. +.+++++.++||+++.++|+...+.|
T Consensus 231 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i 286 (299)
T 3g9x_A 231 QSPVPKLLFWGTPGVLIPPAEAARLAESLP------------------------NCKTVDIGPGLHYLQEDNPDLIGSEI 286 (299)
T ss_dssp HCCSCEEEEEEEECSSSCHHHHHHHHHHST------------------------TEEEEEEEEESSCHHHHCHHHHHHHH
T ss_pred cCCCCeEEEecCCCCCCCHHHHHHHHhhCC------------------------CCeEEEeCCCCCcchhcCHHHHHHHH
Confidence 346899999999999999988777776653 46788999999999999999999999
Q ss_pred HHHHcCC
Q 042005 421 SSFINGT 427 (432)
Q Consensus 421 ~~fl~~~ 427 (432)
++++...
T Consensus 287 ~~~~~~~ 293 (299)
T 3g9x_A 287 ARWLPAL 293 (299)
T ss_dssp HHHSGGG
T ss_pred HHHHhhh
Confidence 9998653
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=98.67 E-value=1.9e-06 Score=80.87 Aligned_cols=62 Identities=16% Similarity=0.238 Sum_probs=53.2
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
+-.++||+.+|..|.++|....+.+.+.+. +-+++.+.++||+++.++|+...+.+
T Consensus 234 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i 289 (309)
T 3u1t_A 234 ASPIPKLLFHAEPGALAPKPVVDYLSENVP------------------------NLEVRFVGAGTHFLQEDHPHLIGQGI 289 (309)
T ss_dssp HCCSCEEEEEEEECSSSCHHHHHHHHHHST------------------------TEEEEEEEEESSCHHHHCHHHHHHHH
T ss_pred cCCCCEEEEecCCCCCCCHHHHHHHHhhCC------------------------CCEEEEecCCcccchhhCHHHHHHHH
Confidence 346899999999999999888878877753 44667789999999999999999999
Q ss_pred HHHHcC
Q 042005 421 SSFING 426 (432)
Q Consensus 421 ~~fl~~ 426 (432)
.+|+..
T Consensus 290 ~~fl~~ 295 (309)
T 3u1t_A 290 ADWLRR 295 (309)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999964
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=98.64 E-value=3.3e-06 Score=78.98 Aligned_cols=62 Identities=15% Similarity=0.240 Sum_probs=45.2
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+||+.+|+.|.+++.......+.++. .+.++.++ ++||+++.++|+...+.+.
T Consensus 242 i~~P~lii~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~-~~gH~~~~e~p~~~~~~i~ 297 (306)
T 3r40_A 242 IPVPMLALWGASGIAQSAATPLDVWRKWA-----------------------SDVQGAPI-ESGHFLPEEAPDQTAEALV 297 (306)
T ss_dssp BCSCEEEEEETTCC------CHHHHHHHB-----------------------SSEEEEEE-SSCSCHHHHSHHHHHHHHH
T ss_pred CCcceEEEEecCCcccCchhHHHHHHhhc-----------------------CCCeEEEe-cCCcCchhhChHHHHHHHH
Confidence 46899999999999999655555555432 35666777 8999999999999999999
Q ss_pred HHHcCC
Q 042005 422 SFINGT 427 (432)
Q Consensus 422 ~fl~~~ 427 (432)
+|+.+.
T Consensus 298 ~fl~~~ 303 (306)
T 3r40_A 298 RFFSAA 303 (306)
T ss_dssp HHHHC-
T ss_pred HHHHhc
Confidence 999764
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=98.63 E-value=2.7e-06 Score=80.48 Aligned_cols=65 Identities=17% Similarity=0.210 Sum_probs=54.2
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+|||..|+.|.++|....+++.+.+. +.+++++.+|||+++.++|++..+.+.
T Consensus 212 i~~P~lii~G~~D~~~p~~~~~~~~~~~~------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~ 267 (282)
T 1iup_A 212 LPNETLIIHGREDQVVPLSSSLRLGELID------------------------RAQLHVFGRCGHWTQIEQTDRFNRLVV 267 (282)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHCT------------------------TEEEEEESSCCSCHHHHSHHHHHHHHH
T ss_pred cCCCEEEEecCCCCCCCHHHHHHHHHhCC------------------------CCeEEEECCCCCCccccCHHHHHHHHH
Confidence 35899999999999999887776666643 567899999999999999999999999
Q ss_pred HHHcCCCCC
Q 042005 422 SFINGTLPP 430 (432)
Q Consensus 422 ~fl~~~~~~ 430 (432)
+|+.....|
T Consensus 268 ~fl~~~~~~ 276 (282)
T 1iup_A 268 EFFNEANTP 276 (282)
T ss_dssp HHHHTC---
T ss_pred HHHhcCCCc
Confidence 999876655
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.63 E-value=5.2e-06 Score=76.19 Aligned_cols=247 Identities=14% Similarity=0.123 Sum_probs=128.6
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCC---Chhh----hhHhhhhhcCCeEEc-CCCCeeecCCCCCCCCCcccCChh
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGP---GFSS----FGAGTMMELGPFRVN-KDGKTLYQNEYAWNKDYKVNGDIR 171 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGP---GcSS----l~~G~f~E~GP~~~~-~~~~~l~~N~~SW~~~~~~~~~~~ 171 (432)
.+..+.++.+.... ....|+||++.||+ |... .....|.+ + +.+- .|-. . .....-..
T Consensus 12 dg~~l~~~~~~p~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~-~-~~v~~~d~~-~----------~~~~~~~~ 77 (275)
T 3h04_A 12 DAFALPYTIIKAKN-QPTKGVIVYIHGGGLMFGKANDLSPQYIDILTE-H-YDLIQLSYR-L----------LPEVSLDC 77 (275)
T ss_dssp TSCEEEEEEECCSS-SSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTT-T-EEEEEECCC-C----------TTTSCHHH
T ss_pred CcEEEEEEEEccCC-CCCCCEEEEEECCcccCCchhhhHHHHHHHHHh-C-ceEEeeccc-c----------CCccccch
Confidence 46778888886543 35689999999998 5443 10133444 3 6652 2210 0 00112234
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchh-hHHH
Q 042005 172 TARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKG-TVDF 250 (432)
Q Consensus 172 ~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~-~~~~ 250 (432)
..+|+.++++...+. +...+++|.|+|+||..+-.+|.. -.++++++.+|..+....... ...+
T Consensus 78 ~~~d~~~~~~~l~~~---~~~~~i~l~G~S~Gg~~a~~~a~~------------~~v~~~v~~~~~~~~~~~~~~~~~~~ 142 (275)
T 3h04_A 78 IIEDVYASFDAIQSQ---YSNCPIFTFGRSSGAYLSLLIARD------------RDIDGVIDFYGYSRINTEPFKTTNSY 142 (275)
T ss_dssp HHHHHHHHHHHHHHT---TTTSCEEEEEETHHHHHHHHHHHH------------SCCSEEEEESCCSCSCSHHHHSCCHH
T ss_pred hHHHHHHHHHHHHhh---CCCCCEEEEEecHHHHHHHHHhcc------------CCccEEEeccccccccccccccccch
Confidence 556666666655554 334789999999999554444443 157999999999876432111 0011
Q ss_pred HHh-cCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCC
Q 042005 251 YWT-HALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKP 329 (432)
Q Consensus 251 ~~~-~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~ 329 (432)
... ...+.+...+.+...-..... ....... ..... ...+.. .+....... .|....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~--~~~~~~~~~-----------------~~~~~~ 200 (275)
T 3h04_A 143 YAKIAQSINETMIAQLTSPTPVVQD-QIAQRFL-IYVYA-RGTGKW--INMINIADY-----------------TDSKYN 200 (275)
T ss_dssp HHHHHTTSCHHHHHTTSCSSCCSSC-SSGGGHH-HHHHH-HHHTCH--HHHHCCSCT-----------------TSGGGS
T ss_pred hhcccccchHHHHhcccCCCCcCCC-ccccchh-hhhhh-hhcCch--HHhhccccc-----------------cccccc
Confidence 111 111233322222111110000 1101110 00000 000000 000000000 000000
Q ss_pred CCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccc
Q 042005 330 QTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVP 409 (432)
Q Consensus 330 ~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP 409 (432)
..... +-.-. +|||.+|+.|.++|....+.+.+.+. +..++++.++||+..
T Consensus 201 -~~~~~---~~~~~-P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~H~~~ 251 (275)
T 3h04_A 201 -IAPDE---LKTLP-PVFIAHCNGDYDVPVEESEHIMNHVP------------------------HSTFERVNKNEHDFD 251 (275)
T ss_dssp -CCHHH---HTTCC-CEEEEEETTCSSSCTHHHHHHHTTCS------------------------SEEEEEECSSCSCTT
T ss_pred -cccch---hccCC-CEEEEecCCCCCCChHHHHHHHHhcC------------------------CceEEEeCCCCCCcc
Confidence 00111 11223 99999999999999988888877653 335789999999999
Q ss_pred ccCh---HHHHHHHHHHHcC
Q 042005 410 SYQP---ARALVLFSSFING 426 (432)
Q Consensus 410 ~dqP---~~a~~m~~~fl~~ 426 (432)
.++| +...+.+.+|+..
T Consensus 252 ~~~~~~~~~~~~~i~~fl~~ 271 (275)
T 3h04_A 252 RRPNDEAITIYRKVVDFLNA 271 (275)
T ss_dssp SSCCHHHHHHHHHHHHHHHH
T ss_pred cCCchhHHHHHHHHHHHHHH
Confidence 9999 5778888888753
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.63 E-value=4.3e-06 Score=75.51 Aligned_cols=58 Identities=14% Similarity=0.117 Sum_probs=50.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.+++....+.+.+.+. +.+++++.++||+.+.++|+...+.+.+
T Consensus 188 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 243 (245)
T 3e0x_A 188 DIPVKAIVAKDELLTLVEYSEIIKKEVE------------------------NSELKIFETGKHFLLVVNAKGVAEEIKN 243 (245)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHSS------------------------SEEEEEESSCGGGHHHHTHHHHHHHHHT
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHcC------------------------CceEEEeCCCCcceEEecHHHHHHHHHh
Confidence 5899999999999999988887777653 4578999999999999999999999988
Q ss_pred HH
Q 042005 423 FI 424 (432)
Q Consensus 423 fl 424 (432)
|+
T Consensus 244 fl 245 (245)
T 3e0x_A 244 FI 245 (245)
T ss_dssp TC
T ss_pred hC
Confidence 85
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1.1e-05 Score=75.78 Aligned_cols=59 Identities=19% Similarity=0.190 Sum_probs=48.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||.+|+.| .++....+.+.+.+ .+.+++++.+|||+++.++|+...+.+.+
T Consensus 233 ~~P~lii~G~~D-~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 287 (293)
T 1mtz_A 233 KIPTLITVGEYD-EVTPNVARVIHEKI------------------------AGSELHVFRDCSHLTMWEDREGYNKLLSD 287 (293)
T ss_dssp CSCEEEEEETTC-SSCHHHHHHHHHHS------------------------TTCEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred CCCEEEEeeCCC-CCCHHHHHHHHHhC------------------------CCceEEEeCCCCCCccccCHHHHHHHHHH
Confidence 589999999999 56655555555554 24577899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 288 fl~~ 291 (293)
T 1mtz_A 288 FILK 291 (293)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9964
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=98.61 E-value=5.4e-06 Score=73.42 Aligned_cols=195 Identities=13% Similarity=0.111 Sum_probs=124.1
Q ss_pred EeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhh------hhhcCCeEEcCCCCeeecCCCCCCCCC
Q 042005 91 SGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGT------MMELGPFRVNKDGKTLYQNEYAWNKDY 164 (432)
Q Consensus 91 sGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~------f~E~GP~~~~~~~~~l~~N~~SW~~~~ 164 (432)
..+++++ +..++.+.+...+ +.|+||++.|++|.+.. +.. |.+.|=-.+..|-. -...||-.+.
T Consensus 6 ~~~~~~~---g~~l~~~~~~~~~---~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~---g~g~s~~~~~ 75 (207)
T 3bdi_A 6 EEFIDVN---GTRVFQRKMVTDS---NRRSIALFHGYSFTSMD-WDKADLFNNYSKIGYNVYAPDYP---GFGRSASSEK 75 (207)
T ss_dssp EEEEEET---TEEEEEEEECCTT---CCEEEEEECCTTCCGGG-GGGGTHHHHHHTTTEEEEEECCT---TSTTSCCCTT
T ss_pred eEEEeeC---CcEEEEEEEeccC---CCCeEEEECCCCCCccc-cchHHHHHHHHhCCCeEEEEcCC---cccccCcccC
Confidence 4566663 5788888776543 67999999999987764 333 44455222222211 0111110000
Q ss_pred cccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccc
Q 042005 165 KVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMM 244 (432)
Q Consensus 165 ~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~ 244 (432)
. .......++..+.+..+.+... ..+++|.|+|+||. +|..+..+.. -.++++++.+|.....
T Consensus 76 ~-~~~~~~~~~~~~~~~~~~~~~~---~~~i~l~G~S~Gg~----~a~~~a~~~~------~~~~~~v~~~~~~~~~--- 138 (207)
T 3bdi_A 76 Y-GIDRGDLKHAAEFIRDYLKANG---VARSVIMGASMGGG----MVIMTTLQYP------DIVDGIIAVAPAWVES--- 138 (207)
T ss_dssp T-CCTTCCHHHHHHHHHHHHHHTT---CSSEEEEEETHHHH----HHHHHHHHCG------GGEEEEEEESCCSCGG---
T ss_pred C-CCCcchHHHHHHHHHHHHHHcC---CCceEEEEECccHH----HHHHHHHhCc------hhheEEEEeCCccccc---
Confidence 0 0111134555555666666552 35899999999994 4444444432 2589999888763221
Q ss_pred hhhHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccc
Q 042005 245 KGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRN 324 (432)
Q Consensus 245 ~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~ 324 (432)
+ .
T Consensus 139 -----~---------------------------------------------------~---------------------- 140 (207)
T 3bdi_A 139 -----L---------------------------------------------------K---------------------- 140 (207)
T ss_dssp -----G---------------------------------------------------H----------------------
T ss_pred -----h---------------------------------------------------h----------------------
Confidence 0 0
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCC
Q 042005 325 WKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGA 404 (432)
Q Consensus 325 w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~A 404 (432)
..+ -+-..+|++.+|+.|.+++....+.+.+.+. +.++..+.++
T Consensus 141 ---------~~~---~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~ 184 (207)
T 3bdi_A 141 ---------GDM---KKIRQKTLLVWGSKDHVVPIALSKEYASIIS------------------------GSRLEIVEGS 184 (207)
T ss_dssp ---------HHH---TTCCSCEEEEEETTCTTTTHHHHHHHHHHST------------------------TCEEEEETTC
T ss_pred ---------HHH---hhccCCEEEEEECCCCccchHHHHHHHHhcC------------------------CceEEEeCCC
Confidence 000 0113789999999999999988888877752 4577899999
Q ss_pred cccccccChHHHHHHHHHHHcC
Q 042005 405 GHFVPSYQPARALVLFSSFING 426 (432)
Q Consensus 405 GHmvP~dqP~~a~~m~~~fl~~ 426 (432)
||..+.++|+...+.+.+|+..
T Consensus 185 ~H~~~~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 185 GHPVYIEKPEEFVRITVDFLRN 206 (207)
T ss_dssp CSCHHHHSHHHHHHHHHHHHHT
T ss_pred CCCccccCHHHHHHHHHHHHhh
Confidence 9999999999999999999964
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=98.61 E-value=1.3e-06 Score=81.82 Aligned_cols=62 Identities=18% Similarity=0.148 Sum_probs=54.2
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+||+..|+.|.+++....+.+.+.+. +.++..+.++||+++.++|+...+.+.
T Consensus 230 i~~P~lii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i~ 285 (293)
T 3hss_A 230 IAAPVLVIGFADDVVTPPYLGREVADALP------------------------NGRYLQIPDAGHLGFFERPEAVNTAML 285 (293)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHST------------------------TEEEEEETTCCTTHHHHSHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHCC------------------------CceEEEeCCCcchHhhhCHHHHHHHHH
Confidence 35899999999999999988777777653 567899999999999999999999999
Q ss_pred HHHcCC
Q 042005 422 SFINGT 427 (432)
Q Consensus 422 ~fl~~~ 427 (432)
+|+...
T Consensus 286 ~fl~~~ 291 (293)
T 3hss_A 286 KFFASV 291 (293)
T ss_dssp HHHHTC
T ss_pred HHHHhc
Confidence 999753
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=98.61 E-value=6.3e-06 Score=73.65 Aligned_cols=184 Identities=15% Similarity=0.177 Sum_probs=117.7
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCC---Ch--h----hhhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCCh
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGP---GF--S----SFGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDI 170 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGP---Gc--S----Sl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~ 170 (432)
.+ .+.+|+++... ....|+||++.|+| |. + .+ .-.|.+.|=-.+..|-. -+...... .....
T Consensus 15 ~g-~l~~~~~~p~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~-~~~l~~~g~~v~~~d~~-----g~g~s~~~-~~~~~ 85 (208)
T 3trd_A 15 VG-QLEVMITRPKG-IEKSVTGIICHPHPLHGGTMNNKVVTTL-AKALDELGLKTVRFNFR-----GVGKSQGR-YDNGV 85 (208)
T ss_dssp SS-EEEEEEECCSS-CCCSEEEEEECSCGGGTCCTTCHHHHHH-HHHHHHTTCEEEEECCT-----TSTTCCSC-CCTTT
T ss_pred Cc-eEEEEEEcCCC-CCCCCEEEEEcCCCCCCCccCCchHHHH-HHHHHHCCCEEEEEecC-----CCCCCCCC-ccchH
Confidence 35 88898887653 34789999999965 22 1 23 24455555322222211 01111100 01233
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHH
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDF 250 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~ 250 (432)
...+|+..++....+.++ ..+++|+|+|+|| .+|..+. +. . .++++++.+|..
T Consensus 86 ~~~~d~~~~~~~l~~~~~---~~~i~l~G~S~Gg----~~a~~~a-~~------~-~v~~~v~~~~~~------------ 138 (208)
T 3trd_A 86 GEVEDLKAVLRWVEHHWS---QDDIWLAGFSFGA----YISAKVA-YD------Q-KVAQLISVAPPV------------ 138 (208)
T ss_dssp HHHHHHHHHHHHHHHHCT---TCEEEEEEETHHH----HHHHHHH-HH------S-CCSEEEEESCCT------------
T ss_pred HHHHHHHHHHHHHHHhCC---CCeEEEEEeCHHH----HHHHHHh-cc------C-CccEEEEecccc------------
Confidence 456666666665555554 3789999999999 4555554 22 1 689999888876
Q ss_pred HHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCCC
Q 042005 251 YWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKPQ 330 (432)
Q Consensus 251 ~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~~ 330 (432)
+.|++...
T Consensus 139 ---------------------------------------------~~~~~~~~--------------------------- 146 (208)
T 3trd_A 139 ---------------------------------------------FYEGFASL--------------------------- 146 (208)
T ss_dssp ---------------------------------------------TSGGGTTC---------------------------
T ss_pred ---------------------------------------------ccCCchhh---------------------------
Confidence 11111100
Q ss_pred CcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc
Q 042005 331 TVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS 410 (432)
Q Consensus 331 ~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~ 410 (432)
-....+||+.+|+.|.+++....+.+.+.+. .+.++.++.++||+...
T Consensus 147 ---------~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~H~~~~ 194 (208)
T 3trd_A 147 ---------TQMASPWLIVQGDQDEVVPFEQVKAFVNQIS-----------------------SPVEFVVMSGASHFFHG 194 (208)
T ss_dssp ---------CSCCSCEEEEEETTCSSSCHHHHHHHHHHSS-----------------------SCCEEEEETTCCSSCTT
T ss_pred ---------hhcCCCEEEEECCCCCCCCHHHHHHHHHHcc-----------------------CceEEEEeCCCCCcccc
Confidence 0014799999999999999999999988865 22678899999999988
Q ss_pred cChHHHHHHHHHHH
Q 042005 411 YQPARALVLFSSFI 424 (432)
Q Consensus 411 dqP~~a~~m~~~fl 424 (432)
++ +...+.+.+|+
T Consensus 195 ~~-~~~~~~i~~fl 207 (208)
T 3trd_A 195 RL-IELRELLVRNL 207 (208)
T ss_dssp CH-HHHHHHHHHHH
T ss_pred cH-HHHHHHHHHHh
Confidence 76 67777888887
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.60 E-value=2.6e-06 Score=81.08 Aligned_cols=60 Identities=20% Similarity=0.339 Sum_probs=52.8
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+||+.+|+.|.+++....+.+.+.+. +.+++.+.++||+++.++|+...+.+.
T Consensus 254 i~~P~Lii~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~g~gH~~~~e~~~~~~~~i~ 309 (314)
T 3kxp_A 254 VTKPVLIVRGESSKLVSAAALAKTSRLRP------------------------DLPVVVVPGADHYVNEVSPEITLKAIT 309 (314)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHCT------------------------TSCEEEETTCCSCHHHHCHHHHHHHHH
T ss_pred CCCCEEEEecCCCccCCHHHHHHHHHhCC------------------------CceEEEcCCCCCcchhhCHHHHHHHHH
Confidence 36899999999999999888888777753 456789999999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 310 ~fl~ 313 (314)
T 3kxp_A 310 NFID 313 (314)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9985
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=5.2e-07 Score=83.65 Aligned_cols=240 Identities=13% Similarity=0.084 Sum_probs=131.8
Q ss_pred eeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCCh--hhhh---HhhhhhcCCe--EEcCCCCeeecCCCCC
Q 042005 88 DQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGF--SSFG---AGTMMELGPF--RVNKDGKTLYQNEYAW 160 (432)
Q Consensus 88 ~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGc--SSl~---~G~f~E~GP~--~~~~~~~~l~~N~~SW 160 (432)
....=+++++ +..+.|+.+...+ ...|+||++.|++|. +... .-.|.+.|=- .++.-|. ..
T Consensus 21 ~~~~~~~~~~---g~~l~~~~~~p~~--~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~-------G~ 88 (270)
T 3pfb_A 21 GMATITLERD---GLQLVGTREEPFG--EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGH-------GD 88 (270)
T ss_dssp EEEEEEEEET---TEEEEEEEEECSS--SSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTS-------TT
T ss_pred cceEEEeccC---CEEEEEEEEcCCC--CCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccc-------cC
Confidence 3445556653 5789999997643 347999999999988 3220 1344555522 2222111 11
Q ss_pred CC-CCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 161 NK-DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 161 ~~-~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
.. .....+-.+.++|+..++...-+.. ...+++|+|+|+||. +|..+..... -.++++++.+|..+
T Consensus 89 s~~~~~~~~~~~~~~d~~~~i~~l~~~~---~~~~i~l~G~S~Gg~----~a~~~a~~~p------~~v~~~v~~~~~~~ 155 (270)
T 3pfb_A 89 SDGKFENMTVLNEIEDANAILNYVKTDP---HVRNIYLVGHAQGGV----VASMLAGLYP------DLIKKVVLLAPAAT 155 (270)
T ss_dssp SSSCGGGCCHHHHHHHHHHHHHHHHTCT---TEEEEEEEEETHHHH----HHHHHHHHCT------TTEEEEEEESCCTH
T ss_pred CCCCCCccCHHHHHHhHHHHHHHHHhCc---CCCeEEEEEeCchhH----HHHHHHHhCc------hhhcEEEEeccccc
Confidence 11 0111233456777766665544322 234899999999994 5555444432 25899999988765
Q ss_pred ccccchhhHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCcc
Q 042005 240 LETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSG 319 (432)
Q Consensus 240 p~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~ 319 (432)
....... ...... ..+... +....... ......... ..
T Consensus 156 ~~~~~~~--~~~~~~-~~~~~~---~~~~~~~~-~~~~~~~~~---~~-------------------------------- 193 (270)
T 3pfb_A 156 LKGDALE--GNTQGV-TYNPDH---IPDRLPFK-DLTLGGFYL---RI-------------------------------- 193 (270)
T ss_dssp HHHHHHH--TEETTE-ECCTTS---CCSEEEET-TEEEEHHHH---HH--------------------------------
T ss_pred cchhhhh--hhhhcc-ccCccc---cccccccc-ccccchhHh---hc--------------------------------
Confidence 4321000 000000 000000 00000000 000000000 00
Q ss_pred ccccccccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEE
Q 042005 320 EINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFV 399 (432)
Q Consensus 320 ~~~~~w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~ 399 (432)
+.. .+..+.+-.-..+||+.+|+.|.+++....+.+.+.+. +.+++
T Consensus 194 -----~~~-----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~ 239 (270)
T 3pfb_A 194 -----AQQ-----LPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQ------------------------NSTLH 239 (270)
T ss_dssp -----HHH-----CCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCS------------------------SEEEE
T ss_pred -----ccc-----cCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCC------------------------CCeEE
Confidence 000 01112222235899999999999999988888877743 45789
Q ss_pred EEcCCcccccccChHHHHHHHHHHHcCCC
Q 042005 400 TVRGAGHFVPSYQPARALVLFSSFINGTL 428 (432)
Q Consensus 400 ~V~~AGHmvP~dqP~~a~~m~~~fl~~~~ 428 (432)
.+.++||....++|+...+.+.+|+....
T Consensus 240 ~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 268 (270)
T 3pfb_A 240 LIEGADHCFSDSYQKNAVNLTTDFLQNNN 268 (270)
T ss_dssp EETTCCTTCCTHHHHHHHHHHHHHHC---
T ss_pred EcCCCCcccCccchHHHHHHHHHHHhhcC
Confidence 99999999999999999999999997653
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=98.56 E-value=5.7e-06 Score=77.16 Aligned_cols=60 Identities=15% Similarity=0.178 Sum_probs=50.6
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
+-..+||+.+|+.|.+++....+.+.+.+. + +++++ ++||+++.++|+...+.+
T Consensus 232 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~-~~gH~~~~~~p~~~~~~i 285 (297)
T 2qvb_A 232 ETDMPKLFINAEPGAIITGRIRDYVRSWPN------------------------Q-TEITV-PGVHFVQEDSPEEIGAAI 285 (297)
T ss_dssp HCCSCEEEEEEEECSSSCHHHHHHHHTSSS------------------------E-EEEEE-EESSCGGGTCHHHHHHHH
T ss_pred cccccEEEEecCCCCcCCHHHHHHHHHHcC------------------------C-eEEEe-cCccchhhhCHHHHHHHH
Confidence 346899999999999999877666665543 4 67888 999999999999999999
Q ss_pred HHHHcC
Q 042005 421 SSFING 426 (432)
Q Consensus 421 ~~fl~~ 426 (432)
.+|+..
T Consensus 286 ~~fl~~ 291 (297)
T 2qvb_A 286 AQFVRR 291 (297)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999963
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=98.54 E-value=4.2e-05 Score=74.02 Aligned_cols=67 Identities=21% Similarity=0.311 Sum_probs=54.9
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEE-cCCcccccccChHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTV-RGAGHFVPSYQPARALVL 419 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V-~~AGHmvP~dqP~~a~~m 419 (432)
+-.++|||.+|+.|.++|....+.+.+.+.= +| .+.+++++ .++||+++.++|+...+.
T Consensus 298 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---------------~~-----~~~~~~~~~~~~gH~~~~e~p~~~~~~ 357 (366)
T 2pl5_A 298 NATCRFLVVSYSSDWLYPPAQSREIVKSLEA---------------AD-----KRVFYVELQSGEGHDSFLLKNPKQIEI 357 (366)
T ss_dssp TCCSEEEEEEETTCCSSCHHHHHHHHHHHHH---------------TT-----CCEEEEEECCCBSSGGGGSCCHHHHHH
T ss_pred cCCCCEEEEecCCCcccCHHHHHHHHHHhhh---------------cc-----cCeEEEEeCCCCCcchhhcChhHHHHH
Confidence 3458999999999999999888888777530 00 05678889 899999999999999999
Q ss_pred HHHHHcCC
Q 042005 420 FSSFINGT 427 (432)
Q Consensus 420 ~~~fl~~~ 427 (432)
+.+|+...
T Consensus 358 i~~fl~~~ 365 (366)
T 2pl5_A 358 LKGFLENP 365 (366)
T ss_dssp HHHHHHCC
T ss_pred HHHHHccC
Confidence 99999653
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.8e-06 Score=83.28 Aligned_cols=66 Identities=18% Similarity=0.215 Sum_probs=55.3
Q ss_pred HHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceE-EEEEcCCcccccccChHH
Q 042005 337 QELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLT-FVTVRGAGHFVPSYQPAR 415 (432)
Q Consensus 337 ~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLT-f~~V~~AGHmvP~dqP~~ 415 (432)
+.+-+-..+||+.+|+.|.+++....+.+.+.+. +.+ ++++.++||+++.++|+.
T Consensus 263 ~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~~------------------------~~~~~~~i~~~gH~~~~e~p~~ 318 (330)
T 3p2m_A 263 DDVDALSAPITLVRGGSSGFVTDQDTAELHRRAT------------------------HFRGVHIVEKSGHSVQSDQPRA 318 (330)
T ss_dssp HHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHCS------------------------SEEEEEEETTCCSCHHHHCHHH
T ss_pred HHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeeEEEeCCCCCCcchhCHHH
Confidence 3343446899999999999999887777776653 446 899999999999999999
Q ss_pred HHHHHHHHHcC
Q 042005 416 ALVLFSSFING 426 (432)
Q Consensus 416 a~~m~~~fl~~ 426 (432)
..+.+.+|+..
T Consensus 319 ~~~~i~~fl~~ 329 (330)
T 3p2m_A 319 LIEIVRGVLDT 329 (330)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHhc
Confidence 99999999964
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=98.54 E-value=9.4e-06 Score=75.05 Aligned_cols=188 Identities=16% Similarity=0.148 Sum_probs=118.3
Q ss_pred eEEEEEEEcCCCCCCCCeEEEEcCCCChhh---------hhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhH
Q 042005 103 SLFYYFVESPQNSSSKPLVLWLNGGPGFSS---------FGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTA 173 (432)
Q Consensus 103 ~lFywf~es~~~p~~~PlilWlnGGPGcSS---------l~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a 173 (432)
.+.+++++..+ ...|+||++.|+||.++ + .-.|.+.|=-.+..|-. -+........ ...+..
T Consensus 34 ~l~~~~~~p~~--~~~p~vv~~HG~~~~~~~~~~~~~~~~-~~~l~~~G~~v~~~d~~-----g~G~s~~~~~-~~~~~~ 104 (249)
T 2i3d_A 34 RLEGRYQPSKE--KSAPIAIILHPHPQFGGTMNNQIVYQL-FYLFQKRGFTTLRFNFR-----SIGRSQGEFD-HGAGEL 104 (249)
T ss_dssp EEEEEEECCSS--TTCCEEEEECCCGGGTCCTTSHHHHHH-HHHHHHTTCEEEEECCT-----TSTTCCSCCC-SSHHHH
T ss_pred eEEEEEEcCCC--CCCCEEEEECCCcccCCCccchHHHHH-HHHHHHCCCEEEEECCC-----CCCCCCCCCC-CccchH
Confidence 78888876643 56799999999864332 3 24555666323322211 1111111101 112333
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHh
Q 042005 174 RDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWT 253 (432)
Q Consensus 174 ~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~ 253 (432)
+|+..++...-+..+ ...+++|+|+|+||. +|..+.... +. ++++++.+|..+..
T Consensus 105 ~d~~~~i~~l~~~~~--~~~~i~l~G~S~Gg~----~a~~~a~~~-----p~--v~~~v~~~~~~~~~------------ 159 (249)
T 2i3d_A 105 SDAASALDWVQSLHP--DSKSCWVAGYSFGAW----IGMQLLMRR-----PE--IEGFMSIAPQPNTY------------ 159 (249)
T ss_dssp HHHHHHHHHHHHHCT--TCCCEEEEEETHHHH----HHHHHHHHC-----TT--EEEEEEESCCTTTS------------
T ss_pred HHHHHHHHHHHHhCC--CCCeEEEEEECHHHH----HHHHHHhcC-----CC--ccEEEEEcCchhhh------------
Confidence 666666655545543 345899999999995 444444432 12 89999988876510
Q ss_pred cCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCCCCcH
Q 042005 254 HALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKPQTVL 333 (432)
Q Consensus 254 ~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~~~~~ 333 (432)
+. .. .
T Consensus 160 ---------------------------------------------~~-~~-~---------------------------- 164 (249)
T 2i3d_A 160 ---------------------------------------------DF-SF-L---------------------------- 164 (249)
T ss_dssp ---------------------------------------------CC-TT-C----------------------------
T ss_pred ---------------------------------------------hh-hh-h----------------------------
Confidence 00 00 0
Q ss_pred HHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh
Q 042005 334 PIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP 413 (432)
Q Consensus 334 ~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP 413 (432)
-.-..+||+.+|+.|.+++....+++.+.+.= . . ..+.++.++.++||+.. .+|
T Consensus 165 ------~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~-------------~-~-----~~~~~~~~~~g~~H~~~-~~~ 218 (249)
T 2i3d_A 165 ------APCPSSGLIINGDADKVAPEKDVNGLVEKLKT-------------Q-K-----GILITHRTLPGANHFFN-GKV 218 (249)
T ss_dssp ------TTCCSCEEEEEETTCSSSCHHHHHHHHHHHTT-------------S-T-----TCCEEEEEETTCCTTCT-TCH
T ss_pred ------cccCCCEEEEEcCCCCCCCHHHHHHHHHHHhh-------------c-c-----CCceeEEEECCCCcccc-cCH
Confidence 01147999999999999999999888888750 0 0 01568899999999998 799
Q ss_pred HHHHHHHHHHHc
Q 042005 414 ARALVLFSSFIN 425 (432)
Q Consensus 414 ~~a~~m~~~fl~ 425 (432)
+...+.+.+|+.
T Consensus 219 ~~~~~~i~~fl~ 230 (249)
T 2i3d_A 219 DELMGECEDYLD 230 (249)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999888888875
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.53 E-value=2.8e-06 Score=79.91 Aligned_cols=218 Identities=13% Similarity=0.075 Sum_probs=129.4
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHh----hhhhcCCeEEcCCCCeeecCCCCCCC-CCcccCChhhHHH
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAG----TMMELGPFRVNKDGKTLYQNEYAWNK-DYKVNGDIRTARD 175 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G----~f~E~GP~~~~~~~~~l~~N~~SW~~-~~~~~~~~~~a~d 175 (432)
+..+.+|++... ..|+||++.|++|.+.. +- .|.+.|=-.+..|-. -+.... .....+..+.++|
T Consensus 15 g~~l~~~~~~p~----~~p~vv~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~-----G~g~s~~~~~~~~~~~~~~d 84 (290)
T 3ksr_A 15 QDELSGTLLTPT----GMPGVLFVHGWGGSQHH-SLVRAREAVGLGCICMTFDLR-----GHEGYASMRQSVTRAQNLDD 84 (290)
T ss_dssp TEEEEEEEEEEE----SEEEEEEECCTTCCTTT-THHHHHHHHTTTCEEECCCCT-----TSGGGGGGTTTCBHHHHHHH
T ss_pred CeEEEEEEecCC----CCcEEEEeCCCCCCcCc-HHHHHHHHHHCCCEEEEeecC-----CCCCCCCCcccccHHHHHHH
Confidence 578888888654 77999999999998775 33 333444333332211 111111 0111233456777
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhcC
Q 042005 176 SYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHA 255 (432)
Q Consensus 176 ~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~g 255 (432)
+..+++ ++...+.....+++|+|+|+|| .+|..+..+. .++++++.+|.+.......
T Consensus 85 ~~~~i~-~l~~~~~~~~~~v~l~G~S~Gg----~~a~~~a~~~--------~~~~~~l~~p~~~~~~~~~---------- 141 (290)
T 3ksr_A 85 IKAAYD-QLASLPYVDAHSIAVVGLSYGG----YLSALLTRER--------PVEWLALRSPALYKDAHWD---------- 141 (290)
T ss_dssp HHHHHH-HHHTSTTEEEEEEEEEEETHHH----HHHHHHTTTS--------CCSEEEEESCCCCCSSCTT----------
T ss_pred HHHHHH-HHHhcCCCCccceEEEEEchHH----HHHHHHHHhC--------CCCEEEEeCcchhhhhhhh----------
Confidence 777766 5555555556689999999999 5555554432 2788888877765432110
Q ss_pred CCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCCCCcHHH
Q 042005 256 LMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKPQTVLPI 335 (432)
Q Consensus 256 lI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~~~~~~~ 335 (432)
........ ...+...... ... + .....
T Consensus 142 -~~~~~~~~--------------------~~~~~~~~~~--~~~-------------------------~-----~~~~~ 168 (290)
T 3ksr_A 142 -QPKVSLNA--------------------DPDLMDYRRR--ALA-------------------------P-----GDNLA 168 (290)
T ss_dssp -SBHHHHHH--------------------STTHHHHTTS--CCC-------------------------G-----GGCHH
T ss_pred -cccccccC--------------------Chhhhhhhhh--hhh-------------------------h-----ccccH
Confidence 00000000 0000000000 000 0 00122
Q ss_pred HHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccccc-ChH
Q 042005 336 IQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSY-QPA 414 (432)
Q Consensus 336 l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~d-qP~ 414 (432)
...+-.-..+||+.+|..|.+++....+.+.+.+.- .++.++..+.++||..+.+ .|+
T Consensus 169 ~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~gH~~~~~~~~~ 227 (290)
T 3ksr_A 169 LAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTN---------------------ARSLTSRVIAGADHALSVKEHQQ 227 (290)
T ss_dssp HHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTT---------------------SSEEEEEEETTCCTTCCSHHHHH
T ss_pred HHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhcc---------------------CCCceEEEcCCCCCCCCcchHHH
Confidence 333444468999999999999999999999888750 1236789999999998765 788
Q ss_pred HHHHHHHHHHc
Q 042005 415 RALVLFSSFIN 425 (432)
Q Consensus 415 ~a~~m~~~fl~ 425 (432)
...+.+.+|+.
T Consensus 228 ~~~~~i~~fl~ 238 (290)
T 3ksr_A 228 EYTRALIDWLT 238 (290)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888888874
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.53 E-value=5.5e-06 Score=80.38 Aligned_cols=59 Identities=17% Similarity=0.261 Sum_probs=49.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||..|+.|.++|. ..+.+.+.+ .+.+++++.+|||+++.++|++..+.+.+
T Consensus 263 ~~P~Lvi~G~~D~~~p~-~~~~~~~~i------------------------p~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 317 (330)
T 3nwo_A 263 TAPVLVIAGEHDEATPK-TWQPFVDHI------------------------PDVRSHVFPGTSHCTHLEKPEEFRAVVAQ 317 (330)
T ss_dssp CSCEEEEEETTCSSCHH-HHHHHHHHC------------------------SSEEEEEETTCCTTHHHHSHHHHHHHHHH
T ss_pred CCCeEEEeeCCCccChH-HHHHHHHhC------------------------CCCcEEEeCCCCCchhhcCHHHHHHHHHH
Confidence 58999999999998874 345555543 36688999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 318 FL~~ 321 (330)
T 3nwo_A 318 FLHQ 321 (330)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9964
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=98.52 E-value=8.1e-06 Score=76.51 Aligned_cols=59 Identities=17% Similarity=0.194 Sum_probs=47.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.++|. ..+.+.++. -.+.+++++.++||+++.++|+...+.+.+
T Consensus 227 ~~P~lii~G~~D~~~~~--~~~~~~~~~----------------------~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 282 (286)
T 2qmq_A 227 KCPVMLVVGDQAPHEDA--VVECNSKLD----------------------PTQTSFLKMADSGGQPQLTQPGKLTEAFKY 282 (286)
T ss_dssp CSCEEEEEETTSTTHHH--HHHHHHHSC----------------------GGGEEEEEETTCTTCHHHHCHHHHHHHHHH
T ss_pred CCCEEEEecCCCccccH--HHHHHHHhc----------------------CCCceEEEeCCCCCcccccChHHHHHHHHH
Confidence 58999999999999982 344444431 025788999999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 283 fl~ 285 (286)
T 2qmq_A 283 FLQ 285 (286)
T ss_dssp HHC
T ss_pred Hhc
Confidence 995
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=98.52 E-value=1.2e-05 Score=75.45 Aligned_cols=60 Identities=13% Similarity=0.096 Sum_probs=47.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+..|+.| ++....+.+.+.+ .+.+++++.+|||+++.++|+...+.|.+
T Consensus 236 ~~P~l~i~G~~D--~~~~~~~~~~~~~------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 289 (301)
T 3kda_A 236 PTMTLAGGGAGG--MGTFQLEQMKAYA------------------------EDVEGHVLPGCGHWLPEECAAPMNRLVID 289 (301)
T ss_dssp CEEEEEECSTTS--CTTHHHHHHHTTB------------------------SSEEEEEETTCCSCHHHHTHHHHHHHHHH
T ss_pred CcceEEEecCCC--CChhHHHHHHhhc------------------------ccCeEEEcCCCCcCchhhCHHHHHHHHHH
Confidence 589999999999 4444333333222 35788999999999999999999999999
Q ss_pred HHcCCC
Q 042005 423 FINGTL 428 (432)
Q Consensus 423 fl~~~~ 428 (432)
|+....
T Consensus 290 ~l~~~~ 295 (301)
T 3kda_A 290 FLSRGR 295 (301)
T ss_dssp HHTTSC
T ss_pred HHhhCc
Confidence 997654
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=98.52 E-value=6.3e-06 Score=77.23 Aligned_cols=60 Identities=13% Similarity=0.148 Sum_probs=53.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||.+|+.|.++|....+.+.+.+. +.+++++.++||+++.++|++..+++.+
T Consensus 200 ~~P~Lii~G~~D~~~p~~~~~~l~~~~p------------------------~~~~~~~~~~GH~~~~e~p~~~~~~i~~ 255 (268)
T 3v48_A 200 RCPVQIICASDDLLVPTACSSELHAALP------------------------DSQKMVMPYGGHACNVTDPETFNALLLN 255 (268)
T ss_dssp CSCEEEEEETTCSSSCTHHHHHHHHHCS------------------------SEEEEEESSCCTTHHHHCHHHHHHHHHH
T ss_pred CCCeEEEEeCCCcccCHHHHHHHHHhCC------------------------cCeEEEeCCCCcchhhcCHHHHHHHHHH
Confidence 5899999999999999988888877754 5677999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 256 fl~~ 259 (268)
T 3v48_A 256 GLAS 259 (268)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9853
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=1.1e-05 Score=75.55 Aligned_cols=68 Identities=21% Similarity=0.316 Sum_probs=54.8
Q ss_pred HHHHHHHHcCCeEEEEecCCccccCchhH-HHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccC
Q 042005 334 PIIQELMAEGIRIWVYSGDTDGALPVTCT-RYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQ 412 (432)
Q Consensus 334 ~~l~~LL~~girVLIy~Gd~D~i~n~~Gt-~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dq 412 (432)
..++.+-...++||+.+|+.|.++|.... +.+.+.+ .+.+++++.+|||+++.++
T Consensus 210 ~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~i~~~gH~~~~e~ 265 (279)
T 1hkh_A 210 SDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAV------------------------PEADYVEVEGAPHGLLWTH 265 (279)
T ss_dssp HHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHC------------------------TTSEEEEETTCCTTHHHHT
T ss_pred hhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhC------------------------CCeeEEEeCCCCccchhcC
Confidence 44555533468999999999999998776 5555553 2557889999999999999
Q ss_pred hHHHHHHHHHHHc
Q 042005 413 PARALVLFSSFIN 425 (432)
Q Consensus 413 P~~a~~m~~~fl~ 425 (432)
|++..+.+.+|+.
T Consensus 266 p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 266 ADEVNAALKTFLA 278 (279)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999985
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.50 E-value=9.3e-06 Score=76.55 Aligned_cols=59 Identities=14% Similarity=0.193 Sum_probs=51.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+.+|+.|.++|....+.+.+.+. +..++++.+|||+++.++|+...+.+.+
T Consensus 229 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 284 (289)
T 1u2e_A 229 KAQTLIVWGRNDRFVPMDAGLRLLSGIA------------------------GSELHIFRDCGHWAQWEHADAFNQLVLN 284 (289)
T ss_dssp CSCEEEEEETTCSSSCTHHHHHHHHHST------------------------TCEEEEESSCCSCHHHHTHHHHHHHHHH
T ss_pred CCCeEEEeeCCCCccCHHHHHHHHhhCC------------------------CcEEEEeCCCCCchhhcCHHHHHHHHHH
Confidence 5899999999999999887777776653 4577899999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 285 fl~ 287 (289)
T 1u2e_A 285 FLA 287 (289)
T ss_dssp HHT
T ss_pred Hhc
Confidence 995
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1.8e-05 Score=76.71 Aligned_cols=60 Identities=18% Similarity=0.121 Sum_probs=51.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecce-EEEEEcCCcccccc---cChHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNL-TFVTVRGAGHFVPS---YQPARALV 418 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nL-Tf~~V~~AGHmvP~---dqP~~a~~ 418 (432)
..+|||.+|+.|.++|....+++.+.+. +. .++++.++||+.+. ++|+...+
T Consensus 313 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 368 (377)
T 1k8q_A 313 HVPIAVWNGGNDLLADPHDVDLLLSKLP------------------------NLIYHRKIPPYNHLDFIWAMDAPQAVYN 368 (377)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHTTCT------------------------TEEEEEEETTCCTTHHHHCTTHHHHTHH
T ss_pred CCCEEEEEeCCCcccCHHHHHHHHHhCc------------------------CcccEEecCCCCceEEEecCCcHHHHHH
Confidence 5899999999999999988888777754 22 36889999999996 89999999
Q ss_pred HHHHHHcC
Q 042005 419 LFSSFING 426 (432)
Q Consensus 419 m~~~fl~~ 426 (432)
.+.+|+..
T Consensus 369 ~i~~fl~~ 376 (377)
T 1k8q_A 369 EIVSMMGT 376 (377)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhcc
Confidence 99999864
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=98.50 E-value=7.4e-06 Score=75.35 Aligned_cols=57 Identities=14% Similarity=0.047 Sum_probs=47.7
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
+-..+||+.+|+.|.+++....+.+.+.+. +.+++++.+ ||+++.++|+...+.|
T Consensus 229 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~g-gH~~~~e~p~~~~~~i 283 (286)
T 3qit_A 229 SIQVPTTLVYGDSSKLNRPEDLQQQKMTMT------------------------QAKRVFLSG-GHNLHIDAAAALASLI 283 (286)
T ss_dssp HCCSCEEEEEETTCCSSCHHHHHHHHHHST------------------------TSEEEEESS-SSCHHHHTHHHHHHHH
T ss_pred ccCCCeEEEEeCCCcccCHHHHHHHHHHCC------------------------CCeEEEeeC-CchHhhhChHHHHHHh
Confidence 446899999999999999888777776653 457899999 9999999999988877
Q ss_pred HH
Q 042005 421 SS 422 (432)
Q Consensus 421 ~~ 422 (432)
++
T Consensus 284 ~~ 285 (286)
T 3qit_A 284 LT 285 (286)
T ss_dssp HC
T ss_pred hc
Confidence 53
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=2.3e-06 Score=91.26 Aligned_cols=231 Identities=12% Similarity=0.107 Sum_probs=133.0
Q ss_pred EEecCCCC-ceEEEEEEEcCC-CC-CCCCeEEEEcCCCChhh-----------hhHhhhhhcCCeEEcCCCCeeecCCCC
Q 042005 94 VNVDSQDG-RSLFYYFVESPQ-NS-SSKPLVLWLNGGPGFSS-----------FGAGTMMELGPFRVNKDGKTLYQNEYA 159 (432)
Q Consensus 94 l~v~~~~~-~~lFywf~es~~-~p-~~~PlilWlnGGPGcSS-----------l~~G~f~E~GP~~~~~~~~~l~~N~~S 159 (432)
+.+....+ ..+.++.+...+ ++ ...|+||++.|||++.. + .-.|.+.|=-.+..|....-.....
T Consensus 458 ~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~-~~~la~~G~~v~~~d~rG~g~s~~~ 536 (706)
T 2z3z_A 458 GTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGW-DIYMAQKGYAVFTVDSRGSANRGAA 536 (706)
T ss_dssp EEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCH-HHHHHHTTCEEEEECCTTCSSSCHH
T ss_pred EEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHH-HHHHHhCCcEEEEEecCCCcccchh
Confidence 33333345 678888885543 22 34699999999998862 3 2456667733333221100000000
Q ss_pred CCC-CCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 160 WNK-DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 160 W~~-~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
|.+ .+. .-.....+|+..+++ ++...+.....+++|+|+|||| .+|..+..+.. -.++++++.+|.+
T Consensus 537 ~~~~~~~-~~~~~~~~D~~~~~~-~l~~~~~~d~~~i~l~G~S~GG----~~a~~~a~~~p------~~~~~~v~~~~~~ 604 (706)
T 2z3z_A 537 FEQVIHR-RLGQTEMADQMCGVD-FLKSQSWVDADRIGVHGWSYGG----FMTTNLMLTHG------DVFKVGVAGGPVI 604 (706)
T ss_dssp HHHTTTT-CTTHHHHHHHHHHHH-HHHTSTTEEEEEEEEEEETHHH----HHHHHHHHHST------TTEEEEEEESCCC
T ss_pred HHHHHhh-ccCCccHHHHHHHHH-HHHhCCCCCchheEEEEEChHH----HHHHHHHHhCC------CcEEEEEEcCCcc
Confidence 100 111 011234566666665 4555655555689999999999 56666555432 2478999999987
Q ss_pred cccccchhhHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCc
Q 042005 239 DLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANS 318 (432)
Q Consensus 239 dp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~ 318 (432)
+.......+. +.+. . .+...... +.. ++..
T Consensus 605 ~~~~~~~~~~--------------~~~~---~--~~~~~~~~-------~~~-------~~~~----------------- 634 (706)
T 2z3z_A 605 DWNRYAIMYG--------------ERYF---D--APQENPEG-------YDA-------ANLL----------------- 634 (706)
T ss_dssp CGGGSBHHHH--------------HHHH---C--CTTTCHHH-------HHH-------HCGG-----------------
T ss_pred chHHHHhhhh--------------hhhc---C--CcccChhh-------hhh-------CCHh-----------------
Confidence 7532110000 0000 0 00000000 000 0000
Q ss_pred cccccccccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEE
Q 042005 319 GEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTF 398 (432)
Q Consensus 319 ~~~~~~w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf 398 (432)
. .+-+-..+|||.+|..|.+|+...++++.+.|.= +| ....+
T Consensus 635 ---------------~---~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~---------------~~-----~~~~~ 676 (706)
T 2z3z_A 635 ---------------K---RAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVK---------------AR-----TYPDY 676 (706)
T ss_dssp ---------------G---GGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHH---------------HT-----CCCEE
T ss_pred ---------------H---hHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHH---------------CC-----CCeEE
Confidence 0 0001247999999999999999999988887740 00 13678
Q ss_pred EEEcCCcccccccChHHHHHHHHHHHc
Q 042005 399 VTVRGAGHFVPSYQPARALVLFSSFIN 425 (432)
Q Consensus 399 ~~V~~AGHmvP~dqP~~a~~m~~~fl~ 425 (432)
..+.++||+...++|+...+.+.+|+.
T Consensus 677 ~~~~~~gH~~~~~~~~~~~~~i~~fl~ 703 (706)
T 2z3z_A 677 YVYPSHEHNVMGPDRVHLYETITRYFT 703 (706)
T ss_dssp EEETTCCSSCCTTHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCCCcccHHHHHHHHHHHHH
Confidence 999999999998899999999999985
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=98.48 E-value=8.5e-06 Score=74.59 Aligned_cols=56 Identities=18% Similarity=0.240 Sum_probs=48.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.+++....+.+.+.+. +.++.++.++||+ .+|+...+.+.+
T Consensus 206 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~---~~p~~~~~~i~~ 258 (262)
T 3r0v_A 206 SIPTLVMDGGASPAWIRHTAQELADTIP------------------------NARYVTLENQTHT---VAPDAIAPVLVE 258 (262)
T ss_dssp CSCEEEEECTTCCHHHHHHHHHHHHHST------------------------TEEEEECCCSSSS---CCHHHHHHHHHH
T ss_pred CCCEEEEeecCCCCCCHHHHHHHHHhCC------------------------CCeEEEecCCCcc---cCHHHHHHHHHH
Confidence 6899999999999999887777777653 4578999999994 699999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 259 fl~ 261 (262)
T 3r0v_A 259 FFT 261 (262)
T ss_dssp HHC
T ss_pred HHh
Confidence 985
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=8.9e-06 Score=80.21 Aligned_cols=60 Identities=18% Similarity=0.200 Sum_probs=52.3
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+||+.+|+.|.++|....+.+.+.+. +.+++++.++||+++.++|+...+.+.
T Consensus 283 i~~PvLii~G~~D~~~~~~~~~~l~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i~ 338 (398)
T 2y6u_A 283 VRKRTIHIVGARSNWCPPQNQLFLQKTLQ------------------------NYHLDVIPGGSHLVNVEAPDLVIERIN 338 (398)
T ss_dssp CCSEEEEEEETTCCSSCHHHHHHHHHHCS------------------------SEEEEEETTCCTTHHHHSHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCCCHHHHHHHHHhCC------------------------CceEEEeCCCCccchhcCHHHHHHHHH
Confidence 36899999999999999988877776652 567899999999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 339 ~fl~ 342 (398)
T 2y6u_A 339 HHIH 342 (398)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9985
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=98.47 E-value=5.7e-06 Score=77.60 Aligned_cols=63 Identities=14% Similarity=0.193 Sum_probs=51.4
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-.++||+.+|..|.++|....+.+.+.+ .+ ++.++ ++||+++.++|+...+.+.
T Consensus 234 i~~P~l~i~g~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~-~~gH~~~~e~p~~~~~~i~ 287 (302)
T 1mj5_A 234 SPIPKLFINAEPGALTTGRMRDFCRTWP------------------------NQ-TEITV-AGAHFIQEDSPDEIGAAIA 287 (302)
T ss_dssp CCSCEEEEEEEECSSSSHHHHHHHTTCS------------------------SE-EEEEE-EESSCGGGTCHHHHHHHHH
T ss_pred cCCCeEEEEeCCCCCCChHHHHHHHHhc------------------------CC-ceEEe-cCcCcccccCHHHHHHHHH
Confidence 3689999999999999986655554443 24 67888 9999999999999999999
Q ss_pred HHHcCCCCC
Q 042005 422 SFINGTLPP 430 (432)
Q Consensus 422 ~fl~~~~~~ 430 (432)
+|+.....+
T Consensus 288 ~fl~~~~~~ 296 (302)
T 1mj5_A 288 AFVRRLRPA 296 (302)
T ss_dssp HHHHHHSCC
T ss_pred HHHHhhccc
Confidence 999765443
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=6.4e-06 Score=75.76 Aligned_cols=60 Identities=13% Similarity=0.163 Sum_probs=52.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+.+|+.|.+++....+.+.+.+. +.+++++.++||+++.++|+...+++.+
T Consensus 206 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 261 (267)
T 3sty_A 206 SVKRVFIVATENDALKKEFLKLMIEKNP------------------------PDEVKEIEGSDHVTMMSKPQQLFTTLLS 261 (267)
T ss_dssp GSCEEEEECCCSCHHHHHHHHHHHHHSC------------------------CSEEEECTTCCSCHHHHSHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhCC------------------------CceEEEeCCCCccccccChHHHHHHHHH
Confidence 4899999999999999888777777653 4577889999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 262 fl~~ 265 (267)
T 3sty_A 262 IANK 265 (267)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9864
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.3e-05 Score=73.85 Aligned_cols=61 Identities=13% Similarity=0.248 Sum_probs=53.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.+++....+.+.+.+. +.+++++.++||+++.++|+...+.+.+
T Consensus 218 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 273 (282)
T 3qvm_A 218 STPALIFQSAKDSLASPEVGQYMAENIP------------------------NSQLELIQAEGHCLHMTDAGLITPLLIH 273 (282)
T ss_dssp CSCEEEEEEEECTTCCHHHHHHHHHHSS------------------------SEEEEEEEEESSCHHHHCHHHHHHHHHH
T ss_pred CCCeEEEEeCCCCcCCHHHHHHHHHhCC------------------------CCcEEEecCCCCcccccCHHHHHHHHHH
Confidence 5899999999999999988877776653 4578999999999999999999999999
Q ss_pred HHcCC
Q 042005 423 FINGT 427 (432)
Q Consensus 423 fl~~~ 427 (432)
|+...
T Consensus 274 fl~~~ 278 (282)
T 3qvm_A 274 FIQNN 278 (282)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99754
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=98.44 E-value=2.2e-05 Score=70.44 Aligned_cols=184 Identities=13% Similarity=-0.010 Sum_probs=115.0
Q ss_pred eEEEEEEEcCCC-CCCCCeEEEEcCCC---Ch--h----hhhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhh
Q 042005 103 SLFYYFVESPQN-SSSKPLVLWLNGGP---GF--S----SFGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRT 172 (432)
Q Consensus 103 ~lFywf~es~~~-p~~~PlilWlnGGP---Gc--S----Sl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~ 172 (432)
.+..+++...+. |...|+||++.|+| |. + .+ .-.|.+.|=-.+..|- .-+..+.... ......
T Consensus 21 ~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~-~~~l~~~g~~v~~~d~-----~g~g~s~~~~-~~~~~~ 93 (220)
T 2fuk_A 21 PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMA-ARALRELGITVVRFNF-----RSVGTSAGSF-DHGDGE 93 (220)
T ss_dssp EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHH-HHHHHTTTCEEEEECC-----TTSTTCCSCC-CTTTHH
T ss_pred eEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchHHHHH-HHHHHHCCCeEEEEec-----CCCCCCCCCc-ccCchh
Confidence 566665544432 46789999999975 21 1 12 1344555633332221 1111111111 122345
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHH
Q 042005 173 ARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYW 252 (432)
Q Consensus 173 a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~ 252 (432)
++|+..++...-+.+ ...+++|+|+|+||. +|..+.... .++++++.+|..+...
T Consensus 94 ~~d~~~~~~~l~~~~---~~~~i~l~G~S~Gg~----~a~~~a~~~--------~v~~~v~~~~~~~~~~---------- 148 (220)
T 2fuk_A 94 QDDLRAVAEWVRAQR---PTDTLWLAGFSFGAY----VSLRAAAAL--------EPQVLISIAPPAGRWD---------- 148 (220)
T ss_dssp HHHHHHHHHHHHHHC---TTSEEEEEEETHHHH----HHHHHHHHH--------CCSEEEEESCCBTTBC----------
T ss_pred HHHHHHHHHHHHhcC---CCCcEEEEEECHHHH----HHHHHHhhc--------cccEEEEecccccchh----------
Confidence 667666666555554 345899999999995 444443331 5899999888876532
Q ss_pred hcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCCCCc
Q 042005 253 THALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKPQTV 332 (432)
Q Consensus 253 ~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~~~~ 332 (432)
|+-.
T Consensus 149 ---------------------------------------------~~~~------------------------------- 152 (220)
T 2fuk_A 149 ---------------------------------------------FSDV------------------------------- 152 (220)
T ss_dssp ---------------------------------------------CTTC-------------------------------
T ss_pred ---------------------------------------------hhhc-------------------------------
Confidence 1000
Q ss_pred HHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccC
Q 042005 333 LPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQ 412 (432)
Q Consensus 333 ~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dq 412 (432)
....+||+.+|+.|.++|....+.+.+.+. .+.++.++.++||+.+. .
T Consensus 153 --------~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~H~~~~-~ 200 (220)
T 2fuk_A 153 --------QPPAQWLVIQGDADEIVDPQAVYDWLETLE-----------------------QQPTLVRMPDTSHFFHR-K 200 (220)
T ss_dssp --------CCCSSEEEEEETTCSSSCHHHHHHHHTTCS-----------------------SCCEEEEETTCCTTCTT-C
T ss_pred --------ccCCcEEEEECCCCcccCHHHHHHHHHHhC-----------------------cCCcEEEeCCCCceehh-h
Confidence 013579999999999999998888887763 24577899999999888 4
Q ss_pred hHHHHHHHHHHHcC
Q 042005 413 PARALVLFSSFING 426 (432)
Q Consensus 413 P~~a~~m~~~fl~~ 426 (432)
|+...+.+.+|+..
T Consensus 201 ~~~~~~~i~~~l~~ 214 (220)
T 2fuk_A 201 LIDLRGALQHGVRR 214 (220)
T ss_dssp HHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777777753
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=1.2e-05 Score=82.29 Aligned_cols=60 Identities=12% Similarity=0.178 Sum_probs=50.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.++|....+.+.+.+ .+.+++++.++||+++.++|+...+.+.+
T Consensus 485 ~~Pvlii~G~~D~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 540 (555)
T 3i28_A 485 LIPALMVTAEKDFVLVPQMSQHMEDWI------------------------PHLKRGHIEDCGHWTQMDKPTEVNQILIK 540 (555)
T ss_dssp CSCEEEEEETTCSSSCGGGGTTGGGTC------------------------TTCEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred ccCEEEEEeCCCCCcCHHHHHHHHhhC------------------------CCceEEEeCCCCCCcchhCHHHHHHHHHH
Confidence 479999999999999986665554443 35678999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 541 fl~~ 544 (555)
T 3i28_A 541 WLDS 544 (555)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9964
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=98.43 E-value=1.6e-05 Score=74.68 Aligned_cols=60 Identities=17% Similarity=0.283 Sum_probs=52.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||.+|+.|.++|....+.+.+.+. +-+++++.++||+++.++|+...+.+.+
T Consensus 225 ~~P~lii~G~~D~~~p~~~~~~~~~~~~------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 280 (285)
T 1c4x_A 225 PHDVLVFHGRQDRIVPLDTSLYLTKHLK------------------------HAELVVLDRCGHWAQLERWDAMGPMLME 280 (285)
T ss_dssp CSCEEEEEETTCSSSCTHHHHHHHHHCS------------------------SEEEEEESSCCSCHHHHSHHHHHHHHHH
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHhCC------------------------CceEEEeCCCCcchhhcCHHHHHHHHHH
Confidence 5899999999999999988777776643 4577899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 281 fl~~ 284 (285)
T 1c4x_A 281 HFRA 284 (285)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 9963
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=7.3e-06 Score=75.80 Aligned_cols=59 Identities=20% Similarity=0.232 Sum_probs=51.4
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+||+.+|+.|.++|....+.+.+.+. +.+++++.+|||+. .++|+...+.+.
T Consensus 188 i~~P~lii~G~~D~~v~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~-~~~~~~~~~~i~ 242 (251)
T 2wtm_A 188 YTKPVLIVHGDQDEAVPYEASVAFSKQYK------------------------NCKLVTIPGDTHCY-DHHLELVTEAVK 242 (251)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHSS------------------------SEEEEEETTCCTTC-TTTHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCcChHHHHHHHHhCC------------------------CcEEEEECCCCccc-chhHHHHHHHHH
Confidence 36899999999999999988887776642 45778899999999 999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 243 ~fl~ 246 (251)
T 2wtm_A 243 EFML 246 (251)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9985
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=98.40 E-value=1.7e-05 Score=74.33 Aligned_cols=58 Identities=17% Similarity=0.127 Sum_probs=50.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||.+|+.|.++|....+.+.+.+. +..++++. +||+++.++|++..+.+.+
T Consensus 208 ~~P~Lvi~G~~D~~~~~~~~~~l~~~ip------------------------~a~~~~i~-~gH~~~~e~p~~~~~~i~~ 262 (266)
T 3om8_A 208 ERPTLVIAGAYDTVTAASHGELIAASIA------------------------GARLVTLP-AVHLSNVEFPQAFEGAVLS 262 (266)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHST------------------------TCEEEEES-CCSCHHHHCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCEEEEeC-CCCCccccCHHHHHHHHHH
Confidence 5899999999999999887777776653 56778886 8999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 263 Fl~ 265 (266)
T 3om8_A 263 FLG 265 (266)
T ss_dssp HHT
T ss_pred Hhc
Confidence 984
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=98.40 E-value=2.1e-05 Score=71.97 Aligned_cols=61 Identities=15% Similarity=0.213 Sum_probs=53.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.+++....+.+.+.+. ++.++.++.++||+++.++|+...+.|.+
T Consensus 208 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 264 (269)
T 4dnp_A 208 KVPCHIFQTARDHSVPASVATYLKNHLG-----------------------GKNTVHWLNIEGHLPHLSAPTLLAQELRR 264 (269)
T ss_dssp CSCEEEEEEESBTTBCHHHHHHHHHHSS-----------------------SCEEEEEEEEESSCHHHHCHHHHHHHHHH
T ss_pred cCCEEEEecCCCcccCHHHHHHHHHhCC-----------------------CCceEEEeCCCCCCccccCHHHHHHHHHH
Confidence 5899999999999999988888887764 12678899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 265 fl~~ 268 (269)
T 4dnp_A 265 ALSH 268 (269)
T ss_dssp HHC-
T ss_pred HHhh
Confidence 9964
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=98.40 E-value=1.5e-05 Score=70.84 Aligned_cols=192 Identities=18% Similarity=0.155 Sum_probs=120.1
Q ss_pred EeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhh------hhhcCCeEEcCC--CCeeecCCCCCCC
Q 042005 91 SGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGT------MMELGPFRVNKD--GKTLYQNEYAWNK 162 (432)
Q Consensus 91 sGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~------f~E~GP~~~~~~--~~~l~~N~~SW~~ 162 (432)
..+++++ +..++|+.+.... ....|+||++.|++|.+.. +.. |.+.|=-.+..| +......+. .
T Consensus 9 ~~~~~~~---g~~l~~~~~~p~~-~~~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~---~ 80 (210)
T 1imj_A 9 EGTIQVQ---GQALFFREALPGS-GQARFSVLLLHGIRFSSET-WQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAA---A 80 (210)
T ss_dssp CCCEEET---TEEECEEEEECSS-SCCSCEEEECCCTTCCHHH-HHHHTHHHHHHHTTCEEEEECCTTSGGGTTSC---C
T ss_pred cceEeeC---CeEEEEEEeCCCC-CCCCceEEEECCCCCccce-eecchhHHHHHHCCCeEEEecCCCCCCCCCCC---C
Confidence 4566663 5789998886543 3467999999999988875 332 444553222222 111111110 0
Q ss_pred CCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc
Q 042005 163 DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET 242 (432)
Q Consensus 163 ~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~ 242 (432)
.+. ..+...++++..+++.. ...++++.|+|+|| .+|..+..... -.++++++.+|...+..
T Consensus 81 ~~~-~~~~~~~~~~~~~~~~~-------~~~~~~l~G~S~Gg----~~a~~~a~~~~------~~v~~~v~~~~~~~~~~ 142 (210)
T 1imj_A 81 PAP-IGELAPGSFLAAVVDAL-------ELGPPVVISPSLSG----MYSLPFLTAPG------SQLPGFVPVAPICTDKI 142 (210)
T ss_dssp SSC-TTSCCCTHHHHHHHHHH-------TCCSCEEEEEGGGH----HHHHHHHTSTT------CCCSEEEEESCSCGGGS
T ss_pred cch-hhhcchHHHHHHHHHHh-------CCCCeEEEEECchH----HHHHHHHHhCc------cccceEEEeCCCccccc
Confidence 011 11111225555555442 23589999999999 45555544432 25889998887754210
Q ss_pred cchhhHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccc
Q 042005 243 MMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEIN 322 (432)
Q Consensus 243 ~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~ 322 (432)
.
T Consensus 143 -----------------------------------------------------------~-------------------- 143 (210)
T 1imj_A 143 -----------------------------------------------------------N-------------------- 143 (210)
T ss_dssp -----------------------------------------------------------C--------------------
T ss_pred -----------------------------------------------------------c--------------------
Confidence 0
Q ss_pred cccccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEc
Q 042005 323 RNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVR 402 (432)
Q Consensus 323 ~~w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~ 402 (432)
.. .+-.-..+|++.+|+.|. ++....+.+ +.+. +.++..+.
T Consensus 144 ----------~~---~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~~------------------------~~~~~~~~ 184 (210)
T 1imj_A 144 ----------AA---NYASVKTPALIVYGDQDP-MGQTSFEHL-KQLP------------------------NHRVLIMK 184 (210)
T ss_dssp ----------HH---HHHTCCSCEEEEEETTCH-HHHHHHHHH-TTSS------------------------SEEEEEET
T ss_pred ----------ch---hhhhCCCCEEEEEcCccc-CCHHHHHHH-hhCC------------------------CCCEEEec
Confidence 01 111225799999999999 988776666 5432 44778899
Q ss_pred CCcccccccChHHHHHHHHHHHcC
Q 042005 403 GAGHFVPSYQPARALVLFSSFING 426 (432)
Q Consensus 403 ~AGHmvP~dqP~~a~~m~~~fl~~ 426 (432)
++||+.+.++|+...+.+.+|+..
T Consensus 185 ~~~H~~~~~~~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 185 GAGHPCYLDKPEEWHTGLLDFLQG 208 (210)
T ss_dssp TCCTTHHHHCHHHHHHHHHHHHHT
T ss_pred CCCcchhhcCHHHHHHHHHHHHHh
Confidence 999999999999999999999965
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=2.4e-06 Score=78.81 Aligned_cols=61 Identities=21% Similarity=0.287 Sum_probs=50.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.+++....+.|.+.+. .+.++..+.+ ||+.+.++|+...+.+.+
T Consensus 189 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~g-gH~~~~~~~~~~~~~i~~ 244 (267)
T 3fla_A 189 DCPVTVFTGDHDPRVSVGEARAWEEHTT-----------------------GPADLRVLPG-GHFFLVDQAAPMIATMTE 244 (267)
T ss_dssp SSCEEEEEETTCTTCCHHHHHGGGGGBS-----------------------SCEEEEEESS-STTHHHHTHHHHHHHHHH
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhcC-----------------------CCceEEEecC-CceeeccCHHHHHHHHHH
Confidence 5799999999999999877666665543 1367889998 999999999999999999
Q ss_pred HHcCC
Q 042005 423 FINGT 427 (432)
Q Consensus 423 fl~~~ 427 (432)
|+...
T Consensus 245 fl~~~ 249 (267)
T 3fla_A 245 KLAGP 249 (267)
T ss_dssp HTC--
T ss_pred Hhccc
Confidence 99653
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=98.39 E-value=8.7e-05 Score=68.90 Aligned_cols=60 Identities=20% Similarity=0.205 Sum_probs=50.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||.+|+.|.++|.....+++.++- .+.+++++.+|||+++.++|+...+.+.+
T Consensus 215 ~~P~lii~G~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 271 (275)
T 1a88_A 215 DVPVLVAHGTDDQVVPYADAAPKSAELL-----------------------ANATLKSYEGLPHGMLSTHPEVLNPDLLA 271 (275)
T ss_dssp CSCEEEEEETTCSSSCSTTTHHHHHHHS-----------------------TTEEEEEETTCCTTHHHHCHHHHHHHHHH
T ss_pred CCCEEEEecCCCccCCcHHHHHHHHhhC-----------------------CCcEEEEcCCCCccHHHhCHHHHHHHHHH
Confidence 5899999999999999875555554421 35688999999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 272 fl~ 274 (275)
T 1a88_A 272 FVK 274 (275)
T ss_dssp HHH
T ss_pred Hhh
Confidence 985
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.39 E-value=2e-05 Score=72.35 Aligned_cols=60 Identities=8% Similarity=-0.053 Sum_probs=45.6
Q ss_pred cCCeEEEEe--cCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHH
Q 042005 342 EGIRIWVYS--GDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVL 419 (432)
Q Consensus 342 ~girVLIy~--Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m 419 (432)
-..+|||.+ ++.|..++....+.+.+.+ .+.+++++.+|||+++.++|+...+.
T Consensus 202 i~~P~lii~g~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~ 257 (264)
T 3ibt_A 202 LPQKPEICHIYSQPLSQDYRQLQLEFAAGH------------------------SWFHPRHIPGRTHFPSLENPVAVAQA 257 (264)
T ss_dssp CSSCCEEEEEECCSCCHHHHHHHHHHHHHC------------------------TTEEEEECCCSSSCHHHHCHHHHHHH
T ss_pred cCCCeEEEEecCCccchhhHHHHHHHHHhC------------------------CCceEEEcCCCCCcchhhCHHHHHHH
Confidence 358999995 4666555554445544443 35678999999999999999999999
Q ss_pred HHHHHc
Q 042005 420 FSSFIN 425 (432)
Q Consensus 420 ~~~fl~ 425 (432)
+.+|+.
T Consensus 258 i~~fl~ 263 (264)
T 3ibt_A 258 IREFLQ 263 (264)
T ss_dssp HHHHTC
T ss_pred HHHHHh
Confidence 999985
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=98.38 E-value=2.4e-05 Score=73.47 Aligned_cols=60 Identities=15% Similarity=0.242 Sum_probs=51.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||.+|+.|.++|.....+++.+. ..+.+++++.+|||+++.++|++..+.+.+
T Consensus 221 ~~P~Lii~G~~D~~~p~~~~~~~~~~~-----------------------~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 277 (281)
T 3fob_A 221 NIPTLIIHGDSDATVPFEYSGKLTHEA-----------------------IPNSKVALIKGGPHGLNATHAKEFNEALLL 277 (281)
T ss_dssp CSCEEEEEETTCSSSCGGGTHHHHHHH-----------------------STTCEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred CCCEEEEecCCCCCcCHHHHHHHHHHh-----------------------CCCceEEEeCCCCCchhhhhHHHHHHHHHH
Confidence 589999999999999998665555332 146788999999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 278 Fl~ 280 (281)
T 3fob_A 278 FLK 280 (281)
T ss_dssp HHC
T ss_pred Hhh
Confidence 996
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=98.38 E-value=9.1e-05 Score=69.00 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=51.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||.+|+.|.++|....+.+.+.+. +..++++. +||+++.++|++..+.+.+
T Consensus 206 ~~P~lvi~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~-~gH~~~~e~p~~~~~~i~~ 260 (266)
T 2xua_A 206 KVPALVISGTHDLAATPAQGRELAQAIA------------------------GARYVELD-ASHISNIERADAFTKTVVD 260 (266)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHST------------------------TCEEEEES-CCSSHHHHTHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHhCC------------------------CCEEEEec-CCCCchhcCHHHHHHHHHH
Confidence 5899999999999999877777776653 45778899 9999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 261 fl~~ 264 (266)
T 2xua_A 261 FLTE 264 (266)
T ss_dssp HHTC
T ss_pred HHHh
Confidence 9965
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.38 E-value=6.5e-05 Score=71.00 Aligned_cols=58 Identities=16% Similarity=0.153 Sum_probs=50.0
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||..|+.|.+++.. .+.+.+ +. +.+++++.+|||+++.++|++..+.+.+
T Consensus 218 ~~P~lvi~G~~D~~~~~~-~~~~~~-~~------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 271 (286)
T 2yys_A 218 RRPLYVLVGERDGTSYPY-AEEVAS-RL------------------------RAPIRVLPEAGHYLWIDAPEAFEEAFKE 271 (286)
T ss_dssp SSCEEEEEETTCTTTTTT-HHHHHH-HH------------------------TCCEEEETTCCSSHHHHCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCcCCHh-HHHHHh-CC------------------------CCCEEEeCCCCCCcChhhHHHHHHHHHH
Confidence 489999999999999987 666555 42 4567899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 272 fl~~ 275 (286)
T 2yys_A 272 ALAA 275 (286)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9965
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=98.37 E-value=1.3e-05 Score=72.41 Aligned_cols=66 Identities=26% Similarity=0.274 Sum_probs=49.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.+++....+.+.+.+.=.+. -.+.++.++.++||+...+.++...+.|++
T Consensus 165 ~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~------------------~~~~~~~~~~~~~H~~~~~~~~~i~~~l~~ 226 (232)
T 1fj2_A 165 DISILQCHGDCDPLVPLMFGSLTVEKLKTLVN------------------PANVTFKTYEGMMHSSCQQEMMDVKQFIDK 226 (232)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHHHSC------------------GGGEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCccCCHHHHHHHHHHHHHhCC------------------CCceEEEEeCCCCcccCHHHHHHHHHHHHH
Confidence 47999999999999999988888877630000 024788999999999977777666666666
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
++..
T Consensus 227 ~l~~ 230 (232)
T 1fj2_A 227 LLPP 230 (232)
T ss_dssp HSCC
T ss_pred hcCC
Confidence 6644
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=98.36 E-value=5.2e-05 Score=71.60 Aligned_cols=59 Identities=10% Similarity=0.145 Sum_probs=51.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||..|+.|.++|....+.+.+.+. +.+++++.+|||+++.++|+...+.+.+
T Consensus 226 ~~P~Lii~G~~D~~~p~~~~~~~~~~~~------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 281 (286)
T 2puj_A 226 KAKTFITWGRDDRFVPLDHGLKLLWNID------------------------DARLHVFSKCGAWAQWEHADEFNRLVID 281 (286)
T ss_dssp CSCEEEEEETTCSSSCTHHHHHHHHHSS------------------------SEEEEEESSCCSCHHHHTHHHHHHHHHH
T ss_pred CCCEEEEEECCCCccCHHHHHHHHHHCC------------------------CCeEEEeCCCCCCccccCHHHHHHHHHH
Confidence 5899999999999999887777666643 5578899999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 282 fl~ 284 (286)
T 2puj_A 282 FLR 284 (286)
T ss_dssp HHH
T ss_pred HHh
Confidence 985
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=98.36 E-value=1.5e-05 Score=72.78 Aligned_cols=60 Identities=15% Similarity=0.279 Sum_probs=52.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+.+|+.|.++|....+.+.+.+. +.+++.+.++||+++.++|+...+.+.+
T Consensus 197 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 252 (258)
T 3dqz_A 197 SVQRVYVMSSEDKAIPCDFIRWMIDNFN------------------------VSKVYEIDGGDHMVMLSKPQKLFDSLSA 252 (258)
T ss_dssp GSCEEEEEETTCSSSCHHHHHHHHHHSC------------------------CSCEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred cCCEEEEECCCCeeeCHHHHHHHHHhCC------------------------cccEEEcCCCCCchhhcChHHHHHHHHH
Confidence 4899999999999999988877777753 3467899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 253 fl~~ 256 (258)
T 3dqz_A 253 IATD 256 (258)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9853
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=98.36 E-value=8.7e-05 Score=68.86 Aligned_cols=60 Identities=20% Similarity=0.262 Sum_probs=50.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccccc--ChHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSY--QPARALVLF 420 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~d--qP~~a~~m~ 420 (432)
.++|||.+|+.|.++|......++.+.- .+.+++++.+|||+++.+ +|+...+.+
T Consensus 212 ~~P~lii~G~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~gH~~~~e~~~p~~~~~~i 268 (274)
T 1a8q_A 212 DIPTLVVHGDDDQVVPIDATGRKSAQII-----------------------PNAELKVYEGSSHGIAMVPGDKEKFNRDL 268 (274)
T ss_dssp CSCEEEEEETTCSSSCGGGTHHHHHHHS-----------------------TTCEEEEETTCCTTTTTSTTHHHHHHHHH
T ss_pred CCCEEEEecCcCCCCCcHHHHHHHHhhC-----------------------CCceEEEECCCCCceecccCCHHHHHHHH
Confidence 5899999999999999875555554421 356889999999999999 999999999
Q ss_pred HHHHc
Q 042005 421 SSFIN 425 (432)
Q Consensus 421 ~~fl~ 425 (432)
.+|+.
T Consensus 269 ~~fl~ 273 (274)
T 1a8q_A 269 LEFLN 273 (274)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99985
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.6e-05 Score=75.56 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=52.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||..|+.|.++|....+.+.+.+. +..++++.+|||+++.++|+...+.+.+
T Consensus 222 ~~P~Lii~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 277 (296)
T 1j1i_A 222 QVPTLVVQGKDDKVVPVETAYKFLDLID------------------------DSWGYIIPHCGHWAMIEHPEDFANATLS 277 (296)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHCT------------------------TEEEEEESSCCSCHHHHSHHHHHHHHHH
T ss_pred CCCEEEEEECCCcccCHHHHHHHHHHCC------------------------CCEEEEECCCCCCchhcCHHHHHHHHHH
Confidence 5899999999999999988887776653 4577899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 278 fl~~ 281 (296)
T 1j1i_A 278 FLSL 281 (296)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9964
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=98.35 E-value=0.00017 Score=68.28 Aligned_cols=60 Identities=23% Similarity=0.291 Sum_probs=47.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+..|+.|.++|.......+.++ ..+.+++++.+|||+++.++|++..+.+.+
T Consensus 235 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~-----------------------~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 291 (294)
T 1ehy_A 235 DLPVTMIWGLGDTCVPYAPLIEFVPKY-----------------------YSNYTMETIEDCGHFLMVEKPEIAIDRIKT 291 (294)
T ss_dssp CSCEEEEEECCSSCCTTHHHHHHHHHH-----------------------BSSEEEEEETTCCSCHHHHCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCcchHHHHHHHHHH-----------------------cCCCceEEeCCCCCChhhhCHHHHHHHHHH
Confidence 589999999999998852222333332 135688999999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 292 fl~ 294 (294)
T 1ehy_A 292 AFR 294 (294)
T ss_dssp HCC
T ss_pred HhC
Confidence 973
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=98.35 E-value=8.4e-05 Score=69.27 Aligned_cols=60 Identities=23% Similarity=0.236 Sum_probs=50.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+.+|+.|.++|.....+.+.++- .+.+++++.+|||+++.++|+...+.+.+
T Consensus 216 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 272 (276)
T 1zoi_A 216 QQPVLVMHGDDDQIVPYENSGVLSAKLL-----------------------PNGALKTYKGYPHGMPTTHADVINADLLA 272 (276)
T ss_dssp CSCEEEEEETTCSSSCSTTTHHHHHHHS-----------------------TTEEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred CCCEEEEEcCCCcccChHHHHHHHHhhC-----------------------CCceEEEcCCCCCchhhhCHHHHHHHHHH
Confidence 5899999999999999875544444321 35678999999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 273 fl~ 275 (276)
T 1zoi_A 273 FIR 275 (276)
T ss_dssp HHT
T ss_pred Hhc
Confidence 985
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=98.34 E-value=0.00013 Score=67.58 Aligned_cols=60 Identities=17% Similarity=0.176 Sum_probs=52.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||.+|+.|.++|.....+++.++- .+.++.++.+|||+++.++|+...+.+.+
T Consensus 211 ~~P~Lvi~G~~D~~~p~~~~~~~~~~~~-----------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 267 (271)
T 3ia2_A 211 DVPTLVIHGDGDQIVPFETTGKVAAELI-----------------------KGAELKVYKDAPHGFAVTHAQQLNEDLLA 267 (271)
T ss_dssp CSCEEEEEETTCSSSCGGGTHHHHHHHS-----------------------TTCEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCcCChHHHHHHHHHhC-----------------------CCceEEEEcCCCCcccccCHHHHHHHHHH
Confidence 5899999999999999987666665532 35678999999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 268 Fl~ 270 (271)
T 3ia2_A 268 FLK 270 (271)
T ss_dssp HHT
T ss_pred Hhh
Confidence 995
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=98.33 E-value=4.4e-06 Score=87.28 Aligned_cols=235 Identities=18% Similarity=0.190 Sum_probs=132.6
Q ss_pred eeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChh------hhhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCc
Q 042005 92 GYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFS------SFGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYK 165 (432)
Q Consensus 92 Gyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcS------Sl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~ 165 (432)
..+.+....+..+.++++...+.....|+||++.|||+++ .+ .-.|.+.|=-.+..|-..-.....+|.+...
T Consensus 334 ~~~~~~~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~ 412 (582)
T 3o4h_A 334 RLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTF-AASLAAAGFHVVMPNYRGSTGYGEEWRLKII 412 (582)
T ss_dssp EEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHH-HHHHHHTTCEEEEECCTTCSSSCHHHHHTTT
T ss_pred eEEEEECCCCCEEEEEEEcCCCCCCCCcEEEEECCCcccccccccCHH-HHHHHhCCCEEEEeccCCCCCCchhHHhhhh
Confidence 4455544456778888886654334789999999999883 23 2456666643333321100001111221111
Q ss_pred ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccch
Q 042005 166 VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMK 245 (432)
Q Consensus 166 ~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~ 245 (432)
........+|+.++++...+. +.. . +++|+|+|+|| .+|..+..+.. -.++++++.+|..+......
T Consensus 413 ~~~~~~~~~d~~~~~~~l~~~-~~~-d-~i~l~G~S~GG----~~a~~~a~~~p------~~~~~~v~~~~~~~~~~~~~ 479 (582)
T 3o4h_A 413 GDPCGGELEDVSAAARWARES-GLA-S-ELYIMGYSYGG----YMTLCALTMKP------GLFKAGVAGASVVDWEEMYE 479 (582)
T ss_dssp TCTTTHHHHHHHHHHHHHHHT-TCE-E-EEEEEEETHHH----HHHHHHHHHST------TTSSCEEEESCCCCHHHHHH
T ss_pred hhcccccHHHHHHHHHHHHhC-CCc-c-eEEEEEECHHH----HHHHHHHhcCC------CceEEEEEcCCccCHHHHhh
Confidence 111234567777777666554 222 3 89999999999 55555555532 25889999998766432111
Q ss_pred hhHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcC-CCcccccCCCcCCCCCCcCCCCcCccccccc
Q 042005 246 GTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAG-NIYSYDIYAPLCNSSSKFNTEIANSGEINRN 324 (432)
Q Consensus 246 ~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g-~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~ 324 (432)
.. +. .... ..+.. .+ ....|.-..+
T Consensus 480 ~~----------~~-~~~~-------------------~~~~~---~~~~~~~~~~~sp--------------------- 505 (582)
T 3o4h_A 480 LS----------DA-AFRN-------------------FIEQL---TGGSREIMRSRSP--------------------- 505 (582)
T ss_dssp TC----------CH-HHHH-------------------HHHHH---TTTCHHHHHHTCG---------------------
T ss_pred cc----------cc-hhHH-------------------HHHHH---cCcCHHHHHhcCH---------------------
Confidence 00 00 0000 00000 01 0000000000
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCC
Q 042005 325 WKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGA 404 (432)
Q Consensus 325 w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~A 404 (432)
.. .+-+-..+|||.+|+.|.+||...++++.+.|.=. | ....++.+.++
T Consensus 506 --------~~---~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~---------------g-----~~~~~~~~~~~ 554 (582)
T 3o4h_A 506 --------IN---HVDRIKEPLALIHPQNASRTPLKPLLRLMGELLAR---------------G-----KTFEAHIIPDA 554 (582)
T ss_dssp --------GG---GGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHT---------------T-----CCEEEEEETTC
T ss_pred --------HH---HHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhC---------------C-----CCEEEEEECCC
Confidence 00 01112479999999999999999999998887510 1 24678999999
Q ss_pred ccccc-ccChHHHHHHHHHHHc
Q 042005 405 GHFVP-SYQPARALVLFSSFIN 425 (432)
Q Consensus 405 GHmvP-~dqP~~a~~m~~~fl~ 425 (432)
||... .++++..++.+.+|+.
T Consensus 555 gH~~~~~~~~~~~~~~i~~fl~ 576 (582)
T 3o4h_A 555 GHAINTMEDAVKILLPAVFFLA 576 (582)
T ss_dssp CSSCCBHHHHHHHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHHHHHHHH
Confidence 99987 5667777887877874
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=98.32 E-value=4e-06 Score=77.71 Aligned_cols=62 Identities=11% Similarity=0.101 Sum_probs=53.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh-HHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP-ARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP-~~a~~m~~ 421 (432)
..+||+.+|+.|.+++....+.+.+.+. ..+.++..+.++||+.+.++| +...+.+.
T Consensus 205 ~~P~lii~G~~D~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 262 (270)
T 3rm3_A 205 VCPALIFVSDEDHVVPPGNADIIFQGIS----------------------STEKEIVRLRNSYHVATLDYDQPMIIERSL 262 (270)
T ss_dssp CSCEEEEEETTCSSSCTTHHHHHHHHSC----------------------CSSEEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred CCCEEEEECCCCcccCHHHHHHHHHhcC----------------------CCcceEEEeCCCCcccccCccHHHHHHHHH
Confidence 5899999999999999999888888865 024578899999999999997 88899999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+|+..
T Consensus 263 ~fl~~ 267 (270)
T 3rm3_A 263 EFFAK 267 (270)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99864
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=98.31 E-value=7.2e-05 Score=69.95 Aligned_cols=59 Identities=24% Similarity=0.317 Sum_probs=50.8
Q ss_pred CCeEEEEecCCccccCchhH-HHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCT-RYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt-~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
.++|||.+|+.|.++|.... +.+.+.+. +.+++++.+|||+++.++|+...+.+.
T Consensus 217 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~ 272 (277)
T 1brt_A 217 DVPALILHGTGDRTLPIENTARVFHKALP------------------------SAEYVEVEGAPHGLLWTHAEEVNTALL 272 (277)
T ss_dssp CSCEEEEEETTCSSSCGGGTHHHHHHHCT------------------------TSEEEEETTCCTTHHHHTHHHHHHHHH
T ss_pred CCCeEEEecCCCccCChHHHHHHHHHHCC------------------------CCcEEEeCCCCcchhhhCHHHHHHHHH
Confidence 58999999999999998776 55555542 557789999999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 273 ~fl~ 276 (277)
T 1brt_A 273 AFLA 276 (277)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9985
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=98.31 E-value=8.1e-06 Score=87.47 Aligned_cols=232 Identities=14% Similarity=0.166 Sum_probs=131.7
Q ss_pred EEecCCCC-ceEEEEEEEcCC--CCCCCCeEEEEcCCCChh------------hhhHhhhhhcCCeEEcCCCCeeecCCC
Q 042005 94 VNVDSQDG-RSLFYYFVESPQ--NSSSKPLVLWLNGGPGFS------------SFGAGTMMELGPFRVNKDGKTLYQNEY 158 (432)
Q Consensus 94 l~v~~~~~-~~lFywf~es~~--~p~~~PlilWlnGGPGcS------------Sl~~G~f~E~GP~~~~~~~~~l~~N~~ 158 (432)
+.+....+ ..+.++.+...+ .....|+||++.|||+++ .+ .-.|.+.|=-.+..|-...-....
T Consensus 490 ~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~-~~~l~~~G~~v~~~d~rG~g~s~~ 568 (741)
T 2ecf_A 490 GTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLF-NQYLAQQGYVVFSLDNRGTPRRGR 568 (741)
T ss_dssp EEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHH-HHHHHHTTCEEEEECCTTCSSSCH
T ss_pred EEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHH-HHHHHhCCCEEEEEecCCCCCCCh
Confidence 34433346 689999886543 234579999999999985 23 245556664333332110000000
Q ss_pred CCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 159 AWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 159 SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
.|.+.....-.....+|+..++. ++...+.....+++|+|+|+|| .+|..+..+.. -.++++++.+|..
T Consensus 569 ~~~~~~~~~~~~~~~~d~~~~~~-~l~~~~~~~~~~i~l~G~S~GG----~~a~~~a~~~p------~~~~~~v~~~~~~ 637 (741)
T 2ecf_A 569 DFGGALYGKQGTVEVADQLRGVA-WLKQQPWVDPARIGVQGWSNGG----YMTLMLLAKAS------DSYACGVAGAPVT 637 (741)
T ss_dssp HHHHTTTTCTTTHHHHHHHHHHH-HHHTSTTEEEEEEEEEEETHHH----HHHHHHHHHCT------TTCSEEEEESCCC
T ss_pred hhhHHHhhhcccccHHHHHHHHH-HHHhcCCCChhhEEEEEEChHH----HHHHHHHHhCC------CceEEEEEcCCCc
Confidence 11110000011233566666655 4445555555689999999999 45555544432 2589999999988
Q ss_pred cccccchhhHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCc
Q 042005 239 DLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANS 318 (432)
Q Consensus 239 dp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~ 318 (432)
+....... + .+... . .. .... +.+.. ++..
T Consensus 638 ~~~~~~~~-----~---------~~~~~---~--~~-~~~~------~~~~~-------~~~~----------------- 667 (741)
T 2ecf_A 638 DWGLYDSH-----Y---------TERYM---D--LP-ARND------AGYRE-------ARVL----------------- 667 (741)
T ss_dssp CGGGSBHH-----H---------HHHHH---C--CT-GGGH------HHHHH-------HCSG-----------------
T ss_pred chhhhccc-----c---------chhhc---C--Cc-ccCh------hhhhh-------cCHH-----------------
Confidence 75321100 0 00000 0 00 0000 00000 0000
Q ss_pred cccccccccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEE
Q 042005 319 GEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTF 398 (432)
Q Consensus 319 ~~~~~~w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf 398 (432)
..++ +-..+|||.+|+.|.+++....+++.+.|.=.+ ....+
T Consensus 668 ---------------~~~~---~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~--------------------~~~~~ 709 (741)
T 2ecf_A 668 ---------------THIE---GLRSPLLLIHGMADDNVLFTNSTSLMSALQKRG--------------------QPFEL 709 (741)
T ss_dssp ---------------GGGG---GCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTT--------------------CCCEE
T ss_pred ---------------HHHh---hCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCC--------------------CceEE
Confidence 0000 114799999999999999999999888874100 13578
Q ss_pred EEEcCCcccccccChHHHHHHHHHHHc
Q 042005 399 VTVRGAGHFVPSYQPARALVLFSSFIN 425 (432)
Q Consensus 399 ~~V~~AGHmvP~dqP~~a~~m~~~fl~ 425 (432)
.++.++||+...++++...+.+.+|+.
T Consensus 710 ~~~~~~~H~~~~~~~~~~~~~i~~fl~ 736 (741)
T 2ecf_A 710 MTYPGAKHGLSGADALHRYRVAEAFLG 736 (741)
T ss_dssp EEETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCchhHHHHHHHHHHH
Confidence 899999999998888888888888885
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.31 E-value=6.7e-06 Score=79.74 Aligned_cols=66 Identities=12% Similarity=0.072 Sum_probs=54.9
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcC-CcccccccChHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRG-AGHFVPSYQPARALVLF 420 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~-AGHmvP~dqP~~a~~m~ 420 (432)
-.++|||.+|+.|.+++....+.+.+.+.= . ..+.+++++.+ +||+++.++|+...+.+
T Consensus 306 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~---------------~-----g~~~~~~~i~~~~gH~~~~e~p~~~~~~i 365 (377)
T 3i1i_A 306 VEANVLMIPCKQDLLQPSRYNYKMVDLLQK---------------Q-----GKYAEVYEIESINGHMAGVFDIHLFEKKV 365 (377)
T ss_dssp CCSEEEEECBTTCSSSCTHHHHHHHHHHHH---------------T-----TCCEEECCBCCTTGGGHHHHCGGGTHHHH
T ss_pred CCCCEEEEecCCccccCHHHHHHHHHHHHh---------------c-----CCCceEEEcCCCCCCcchhcCHHHHHHHH
Confidence 358999999999999999888888877620 0 02567888988 99999999999999999
Q ss_pred HHHHcCC
Q 042005 421 SSFINGT 427 (432)
Q Consensus 421 ~~fl~~~ 427 (432)
.+|+...
T Consensus 366 ~~fl~~~ 372 (377)
T 3i1i_A 366 YEFLNRK 372 (377)
T ss_dssp HHHHHSC
T ss_pred HHHHHhh
Confidence 9999754
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=98.31 E-value=1.2e-05 Score=71.93 Aligned_cols=194 Identities=15% Similarity=0.051 Sum_probs=117.7
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhh-----HhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHH
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFG-----AGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTAR 174 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~-----~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~ 174 (432)
.+..+.++++...+ ..|+||++.|+.|..... .-.|.+.|=-.+..|-...-.............+-++.++
T Consensus 20 ~g~~l~~~~~~p~~---~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~ 96 (223)
T 2o2g_A 20 GEVKLKGNLVIPNG---ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFDIGLLAS 96 (223)
T ss_dssp TTEEEEEEEECCTT---CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCSSTTCHHHHHH
T ss_pred CCeEEEEEEecCCC---CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhcccCcHHHHHH
Confidence 35788888886532 579999999998766420 1345556644443332100000000000000123345566
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhc
Q 042005 175 DSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTH 254 (432)
Q Consensus 175 d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~ 254 (432)
|+..+++ ++...+.....++++.|+|+||. +|..+..... -.++++++.+|..+..
T Consensus 97 d~~~~i~-~l~~~~~~~~~~i~l~G~S~Gg~----~a~~~a~~~~------~~v~~~v~~~~~~~~~------------- 152 (223)
T 2o2g_A 97 RLVGATD-WLTHNPDTQHLKVGYFGASTGGG----AALVAAAERP------ETVQAVVSRGGRPDLA------------- 152 (223)
T ss_dssp HHHHHHH-HHHHCTTTTTSEEEEEEETHHHH----HHHHHHHHCT------TTEEEEEEESCCGGGC-------------
T ss_pred HHHHHHH-HHHhCcCCCCCcEEEEEeCccHH----HHHHHHHhCC------CceEEEEEeCCCCCcC-------------
Confidence 6666554 44555566677999999999995 4444444432 2589999888753210
Q ss_pred CCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCCCCcHH
Q 042005 255 ALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKPQTVLP 334 (432)
Q Consensus 255 glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~~~~~~ 334 (432)
...
T Consensus 153 -----------------------------------------------~~~------------------------------ 155 (223)
T 2o2g_A 153 -----------------------------------------------PSA------------------------------ 155 (223)
T ss_dssp -----------------------------------------------TTT------------------------------
T ss_pred -----------------------------------------------HHH------------------------------
Confidence 000
Q ss_pred HHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc-cCh
Q 042005 335 IIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS-YQP 413 (432)
Q Consensus 335 ~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~-dqP 413 (432)
+-.-..+||+.+|..|.+++. ...+.++++. .+.++.++.++||.... +++
T Consensus 156 ----~~~~~~P~l~i~g~~D~~~~~-~~~~~~~~~~-----------------------~~~~~~~~~~~~H~~~~~~~~ 207 (223)
T 2o2g_A 156 ----LPHVKAPTLLIVGGYDLPVIA-MNEDALEQLQ-----------------------TSKRLVIIPRASHLFEEPGAL 207 (223)
T ss_dssp ----GGGCCSCEEEEEETTCHHHHH-HHHHHHHHCC-----------------------SSEEEEEETTCCTTCCSTTHH
T ss_pred ----HhcCCCCEEEEEccccCCCCH-HHHHHHHhhC-----------------------CCeEEEEeCCCCcccCChHHH
Confidence 001147999999999999973 3445555432 35678899999999766 567
Q ss_pred HHHHHHHHHHHc
Q 042005 414 ARALVLFSSFIN 425 (432)
Q Consensus 414 ~~a~~m~~~fl~ 425 (432)
+...+.+.+|+.
T Consensus 208 ~~~~~~i~~fl~ 219 (223)
T 2o2g_A 208 TAVAQLASEWFM 219 (223)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 889999999985
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=98.29 E-value=8.5e-05 Score=68.89 Aligned_cols=60 Identities=22% Similarity=0.272 Sum_probs=50.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||.+|+.|.++|......++.++- .+.+++++.+|||+++.++|+...+.+.+
T Consensus 213 ~~P~lii~G~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 269 (273)
T 1a8s_A 213 DVPTLVVHGDADQVVPIEASGIASAALV-----------------------KGSTLKIYSGAPHGLTDTHKDQLNADLLA 269 (273)
T ss_dssp CSCEEEEEETTCSSSCSTTTHHHHHHHS-----------------------TTCEEEEETTCCSCHHHHTHHHHHHHHHH
T ss_pred CCCEEEEECCCCccCChHHHHHHHHHhC-----------------------CCcEEEEeCCCCCcchhhCHHHHHHHHHH
Confidence 5899999999999999875555554421 35678999999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 270 fl~ 272 (273)
T 1a8s_A 270 FIK 272 (273)
T ss_dssp HHH
T ss_pred HHh
Confidence 985
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=98.27 E-value=2.5e-05 Score=70.68 Aligned_cols=64 Identities=9% Similarity=-0.006 Sum_probs=55.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccC-hHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQ-PARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dq-P~~a~~m~~ 421 (432)
..+||+.+|..|.+++....+.+.+.+.- . .+.+++.+.++||+...++ |+...+.+.
T Consensus 184 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-------------~--------~~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 242 (251)
T 3dkr_A 184 KQPTFIGQAGQDELVDGRLAYQLRDALIN-------------A--------ARVDFHWYDDAKHVITVNSAHHALEEDVI 242 (251)
T ss_dssp CSCEEEEEETTCSSBCTTHHHHHHHHCTT-------------C--------SCEEEEEETTCCSCTTTSTTHHHHHHHHH
T ss_pred CCCEEEEecCCCcccChHHHHHHHHHhcC-------------C--------CCceEEEeCCCCcccccccchhHHHHHHH
Confidence 58999999999999999999998888750 0 2467899999999999986 999999999
Q ss_pred HHHcCC
Q 042005 422 SFINGT 427 (432)
Q Consensus 422 ~fl~~~ 427 (432)
+|+...
T Consensus 243 ~fl~~~ 248 (251)
T 3dkr_A 243 AFMQQE 248 (251)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 999754
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=98.27 E-value=0.00067 Score=63.33 Aligned_cols=66 Identities=17% Similarity=0.290 Sum_probs=50.3
Q ss_pred HHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccC
Q 042005 333 LPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQ 412 (432)
Q Consensus 333 ~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dq 412 (432)
...++.+. .++|||..|+.|.+++....+.+.+. .+.+++++.++||+++.++
T Consensus 219 ~~~~~~~~--~~P~lii~G~~D~~~~~~~~~~~~~~-------------------------~~~~~~~i~~~gH~~~~e~ 271 (285)
T 3bwx_A 219 WPLFDALA--TRPLLVLRGETSDILSAQTAAKMASR-------------------------PGVELVTLPRIGHAPTLDE 271 (285)
T ss_dssp HHHHHHHT--TSCEEEEEETTCSSSCHHHHHHHHTS-------------------------TTEEEEEETTCCSCCCSCS
T ss_pred hHHHHHcc--CCCeEEEEeCCCCccCHHHHHHHHhC-------------------------CCcEEEEeCCCCccchhhC
Confidence 34445442 58999999999999987655544332 2567899999999999999
Q ss_pred hHHHHHHHHHHHcC
Q 042005 413 PARALVLFSSFING 426 (432)
Q Consensus 413 P~~a~~m~~~fl~~ 426 (432)
|+.. ..+.+|+..
T Consensus 272 p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 272 PESI-AAIGRLLER 284 (285)
T ss_dssp HHHH-HHHHHHHTT
T ss_pred chHH-HHHHHHHHh
Confidence 9876 678999853
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=98.26 E-value=2.8e-05 Score=74.17 Aligned_cols=60 Identities=13% Similarity=0.015 Sum_probs=47.4
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-.++|||..|+.|.+++ ...+.+.+.+. -..+..+.+.+|||+++. +|++..+.+.
T Consensus 237 i~~P~Lvi~G~~D~~~~-~~~~~~~~~~p----------------------~~~~~~~~~~~~GH~~~~-~p~~~~~~i~ 292 (297)
T 2xt0_A 237 WSGPTFMAVGAQDPVLG-PEVMGMLRQAI----------------------RGCPEPMIVEAGGHFVQE-HGEPIARAAL 292 (297)
T ss_dssp CCSCEEEEEETTCSSSS-HHHHHHHHHHS----------------------TTCCCCEEETTCCSSGGG-GCHHHHHHHH
T ss_pred cCCCeEEEEeCCCcccC-hHHHHHHHhCC----------------------CCeeEEeccCCCCcCccc-CHHHHHHHHH
Confidence 36899999999999999 66666666653 012333447899999999 9999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 293 ~fl~ 296 (297)
T 2xt0_A 293 AAFG 296 (297)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 9985
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=0.00011 Score=71.85 Aligned_cols=60 Identities=17% Similarity=0.210 Sum_probs=49.7
Q ss_pred CCeEEEEecCCccccCc--hhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecce-EEEEEcCCcccccccChHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPV--TCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNL-TFVTVRGAGHFVPSYQPARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~--~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nL-Tf~~V~~AGHmvP~dqP~~a~~m 419 (432)
.++|||.+|+.|.++|. ...+.+.+.+ .+. +++++.+|||+++.++|+...+.
T Consensus 291 ~~PvLii~G~~D~~~p~~~~~~~~l~~~~------------------------p~~~~~~~i~~aGH~~~~e~p~~~~~~ 346 (356)
T 2e3j_A 291 TPPALFIGGQYDVGTIWGAQAIERAHEVM------------------------PNYRGTHMIADVGHWIQQEAPEETNRL 346 (356)
T ss_dssp CSCEEEEEETTCHHHHHTHHHHHTHHHHC------------------------TTEEEEEEESSCCSCHHHHSHHHHHHH
T ss_pred CCCEEEEecCCCccccccHHHHHHHHHhC------------------------cCcceEEEecCcCcccchhCHHHHHHH
Confidence 58999999999999996 4444444443 255 78999999999999999999999
Q ss_pred HHHHHcC
Q 042005 420 FSSFING 426 (432)
Q Consensus 420 ~~~fl~~ 426 (432)
|.+|+..
T Consensus 347 i~~fl~~ 353 (356)
T 2e3j_A 347 LLDFLGG 353 (356)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 9999965
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=98.22 E-value=0.00014 Score=70.08 Aligned_cols=57 Identities=21% Similarity=0.255 Sum_probs=45.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||..|+.| +++. ..+.+.+.+ .+..++++ ++||+++.++|+...+.+.+
T Consensus 248 ~~P~Lvi~G~~D-~~~~-~~~~~~~~~------------------------~~~~~~~i-~~gH~~~~e~p~~~~~~i~~ 300 (318)
T 2psd_A 248 DLPKLFIESDPG-FFSN-AIVEGAKKF------------------------PNTEFVKV-KGLHFLQEDAPDEMGKYIKS 300 (318)
T ss_dssp TSCEEEEEEEEC-SSHH-HHHHHHTTS------------------------SSEEEEEE-EESSSGGGTCHHHHHHHHHH
T ss_pred CCCeEEEEeccc-cCcH-HHHHHHHhC------------------------CCcEEEEe-cCCCCCHhhCHHHHHHHHHH
Confidence 689999999999 8876 555544443 24566777 88999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 301 fl~~ 304 (318)
T 2psd_A 301 FVER 304 (318)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9853
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=98.22 E-value=4.8e-06 Score=76.75 Aligned_cols=63 Identities=16% Similarity=0.105 Sum_probs=48.9
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
+-.++||+.+|+.|.+++....+.+..+ ...+.++.++.++||+++.++|+...+.+
T Consensus 206 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 262 (279)
T 4g9e_A 206 EAQLPIAVVNGRDEPFVELDFVSKVKFG-----------------------NLWEGKTHVIDNAGHAPFREAPAEFDAYL 262 (279)
T ss_dssp HCCSCEEEEEETTCSSBCHHHHTTCCCS-----------------------SBGGGSCEEETTCCSCHHHHSHHHHHHHH
T ss_pred hcCCCEEEEEcCCCcccchHHHHHHhhc-----------------------cCCCCeEEEECCCCcchHHhCHHHHHHHH
Confidence 3368999999999999997543322200 11345678999999999999999999999
Q ss_pred HHHHcC
Q 042005 421 SSFING 426 (432)
Q Consensus 421 ~~fl~~ 426 (432)
.+||.+
T Consensus 263 ~~fl~~ 268 (279)
T 4g9e_A 263 ARFIRD 268 (279)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999964
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=98.22 E-value=9.1e-05 Score=70.22 Aligned_cols=60 Identities=18% Similarity=0.213 Sum_probs=52.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||..|+.|.++|....+.+.+.+. +..++++.+|||+++.++|+...+.+.+
T Consensus 230 ~~P~lvi~G~~D~~~~~~~~~~~~~~~p------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 285 (291)
T 2wue_A 230 RQPVLLIWGREDRVNPLDGALVALKTIP------------------------RAQLHVFGQCGHWVQVEKFDEFNKLTIE 285 (291)
T ss_dssp CSCEEEEEETTCSSSCGGGGHHHHHHST------------------------TEEEEEESSCCSCHHHHTHHHHHHHHHH
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHHCC------------------------CCeEEEeCCCCCChhhhCHHHHHHHHHH
Confidence 5899999999999999887777666643 5678999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+.+
T Consensus 286 fl~~ 289 (291)
T 2wue_A 286 FLGG 289 (291)
T ss_dssp HTTC
T ss_pred HHhc
Confidence 9964
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=98.21 E-value=4.3e-05 Score=73.45 Aligned_cols=59 Identities=20% Similarity=0.094 Sum_probs=47.6
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEE--cCCcccccccChHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTV--RGAGHFVPSYQPARALVL 419 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V--~~AGHmvP~dqP~~a~~m 419 (432)
-.++|||..|+.|.+++ ...+.+.+.+. +..++++ .+|||+++. +|++..+.
T Consensus 248 i~~P~Lvi~G~~D~~~~-~~~~~~~~~ip------------------------~~~~~~i~~~~~GH~~~~-~p~~~~~~ 301 (310)
T 1b6g_A 248 WNGQTFMAIGMKDKLLG-PDVMYPMKALI------------------------NGCPEPLEIADAGHFVQE-FGEQVARE 301 (310)
T ss_dssp CCSEEEEEEETTCSSSS-HHHHHHHHHHS------------------------TTCCCCEEETTCCSCGGG-GHHHHHHH
T ss_pred ccCceEEEeccCcchhh-hHHHHHHHhcc------------------------cccceeeecCCcccchhh-ChHHHHHH
Confidence 36899999999999999 66666666553 2233444 999999999 99999999
Q ss_pred HHHHHcC
Q 042005 420 FSSFING 426 (432)
Q Consensus 420 ~~~fl~~ 426 (432)
+.+|+..
T Consensus 302 i~~Fl~~ 308 (310)
T 1b6g_A 302 ALKHFAE 308 (310)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999964
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=98.20 E-value=2.7e-05 Score=70.26 Aligned_cols=60 Identities=15% Similarity=0.164 Sum_probs=45.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|++.+|+.|.+++....+.+.+.+.=.+ ...++ .+.++||+.+.+.++...+.|++
T Consensus 166 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~--------------------~~~~~-~~~~~gH~~~~~~~~~~~~~l~~ 224 (226)
T 2h1i_A 166 GKSVFIAAGTNDPICSSAESEELKVLLENAN--------------------ANVTM-HWENRGHQLTMGEVEKAKEWYDK 224 (226)
T ss_dssp TCEEEEEEESSCSSSCHHHHHHHHHHHHTTT--------------------CEEEE-EEESSTTSCCHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCCcCCHHHHHHHHHHHHhcC--------------------CeEEE-EeCCCCCCCCHHHHHHHHHHHHH
Confidence 4799999999999999998888888764100 14667 89999999987666665555554
Q ss_pred H
Q 042005 423 F 423 (432)
Q Consensus 423 f 423 (432)
+
T Consensus 225 ~ 225 (226)
T 2h1i_A 225 A 225 (226)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.20 E-value=6.2e-05 Score=66.51 Aligned_cols=61 Identities=16% Similarity=0.140 Sum_probs=51.1
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
...+||+.+|+.|.++|....+.+.+.++ .++.++.++||+.+.++|+...+++
T Consensus 126 ~~~p~lii~G~~D~~vp~~~~~~~~~~~~-------------------------~~~~~~~~~gH~~~~~~p~~~~~~~- 179 (194)
T 2qs9_A 126 NCPYIVQFGSTDDPFLPWKEQQEVADRLE-------------------------TKLHKFTDCGHFQNTEFHELITVVK- 179 (194)
T ss_dssp HCSEEEEEEETTCSSSCHHHHHHHHHHHT-------------------------CEEEEESSCTTSCSSCCHHHHHHHH-
T ss_pred hCCCEEEEEeCCCCcCCHHHHHHHHHhcC-------------------------CeEEEeCCCCCccchhCHHHHHHHH-
Confidence 34689999999999999988888777642 2678899999999999999988887
Q ss_pred HHHcCCC
Q 042005 422 SFINGTL 428 (432)
Q Consensus 422 ~fl~~~~ 428 (432)
+|+.+..
T Consensus 180 ~fl~~~~ 186 (194)
T 2qs9_A 180 SLLKVPA 186 (194)
T ss_dssp HHHTCCC
T ss_pred HHHHhhh
Confidence 8996543
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.1e-05 Score=75.58 Aligned_cols=57 Identities=11% Similarity=0.095 Sum_probs=46.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+.+|+.|.+++.. + .+.+ ...+.. +++.++||+++.++|+...+.+.+
T Consensus 232 ~~P~lii~g~~D~~~~~~-~-~~~~------------------------~~~~~~-~~~~~~gH~~~~e~p~~~~~~i~~ 284 (292)
T 3l80_A 232 KIPSIVFSESFREKEYLE-S-EYLN------------------------KHTQTK-LILCGQHHYLHWSETNSILEKVEQ 284 (292)
T ss_dssp TSCEEEEECGGGHHHHHT-S-TTCC------------------------CCTTCE-EEECCSSSCHHHHCHHHHHHHHHH
T ss_pred CCCEEEEEccCccccchH-H-HHhc------------------------cCCCce-eeeCCCCCcchhhCHHHHHHHHHH
Confidence 689999999999998875 3 2211 123456 889999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+.+
T Consensus 285 fl~~ 288 (292)
T 3l80_A 285 LLSN 288 (292)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9975
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=98.19 E-value=4.6e-05 Score=74.20 Aligned_cols=62 Identities=15% Similarity=-0.002 Sum_probs=50.4
Q ss_pred HcCCeEEEEecCCccccCc----hhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEc-CCcccccccChHH
Q 042005 341 AEGIRIWVYSGDTDGALPV----TCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVR-GAGHFVPSYQPAR 415 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~----~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~-~AGHmvP~dqP~~ 415 (432)
+-.++|||.+|+.|.++|. ...+.+.+.+ .+.+++++. ++||+++.++|+.
T Consensus 310 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~------------------------~~~~~~~i~~~~gH~~~~e~p~~ 365 (377)
T 2b61_A 310 RIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSG------------------------VDLHFYEFPSDYGHDAFLVDYDQ 365 (377)
T ss_dssp TCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTT------------------------CEEEEEEECCTTGGGHHHHCHHH
T ss_pred hcCCCEEEEecCCcccCCccchHHHHHHHHhcC------------------------CCceEEEeCCCCCchhhhcCHHH
Confidence 3358999999999999998 4444444443 245788999 9999999999999
Q ss_pred HHHHHHHHHcC
Q 042005 416 ALVLFSSFING 426 (432)
Q Consensus 416 a~~m~~~fl~~ 426 (432)
..+.|.+|+..
T Consensus 366 ~~~~i~~fl~~ 376 (377)
T 2b61_A 366 FEKRIRDGLAG 376 (377)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999999964
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=98.18 E-value=0.00011 Score=75.12 Aligned_cols=61 Identities=20% Similarity=0.254 Sum_probs=50.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|..|.++|......++.+.- .+.+++++.++||+++.++|+...+.+.+
T Consensus 218 ~~PvLiI~G~~D~~vp~~~~~~~l~~~~-----------------------~~~~~~~i~gagH~~~~e~p~~v~~~I~~ 274 (456)
T 3vdx_A 218 DVPALILHGTGDRTLPIENTARVFHKAL-----------------------PSAEYVEVEGAPHGLLWTHAEEVNTALLA 274 (456)
T ss_dssp CSCCEEEEETTCSSSCGGGTHHHHHHHC-----------------------TTSEEEEETTCCSCTTTTTHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCcCHHHHHHHHHHHC-----------------------CCceEEEeCCCCCcchhhCHHHHHHHHHH
Confidence 5899999999999999984455554421 35678999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 275 FL~~ 278 (456)
T 3vdx_A 275 FLAK 278 (456)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9863
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=98.18 E-value=1.6e-05 Score=73.29 Aligned_cols=190 Identities=15% Similarity=0.166 Sum_probs=115.6
Q ss_pred EEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhh-c--CCeEE-cCCCCeeecCCCCCCCC-----CcccCChhhHH
Q 042005 104 LFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMME-L--GPFRV-NKDGKTLYQNEYAWNKD-----YKVNGDIRTAR 174 (432)
Q Consensus 104 lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E-~--GP~~~-~~~~~~l~~N~~SW~~~-----~~~~~~~~~a~ 174 (432)
+.|++.+.. ...|+||++.|+.|.+.. +.-+.+ . + |.+ ..++........+|... +...+-.+.++
T Consensus 51 ~~~~~~~~~---~~~p~vv~~HG~~~~~~~-~~~~~~~l~~~-~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 125 (251)
T 2r8b_A 51 YFHKSRAGV---AGAPLFVLLHGTGGDENQ-FFDFGARLLPQ-ATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATG 125 (251)
T ss_dssp SCEEEECCC---TTSCEEEEECCTTCCHHH-HHHHHHHHSTT-SEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHH
T ss_pred ceEEEeCCC---CCCcEEEEEeCCCCCHhH-HHHHHHhcCCC-ceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHH
Confidence 445444332 467999999999988765 333322 1 3 432 12111111112334321 11111223467
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhc
Q 042005 175 DSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTH 254 (432)
Q Consensus 175 d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~ 254 (432)
++..++....+.+ ...+++|+|.|+||. +|..+..... -.++++++.+|..+...
T Consensus 126 ~~~~~l~~~~~~~---~~~~i~l~G~S~Gg~----~a~~~a~~~p------~~v~~~v~~~~~~~~~~------------ 180 (251)
T 2r8b_A 126 KMADFIKANREHY---QAGPVIGLGFSNGAN----ILANVLIEQP------ELFDAAVLMHPLIPFEP------------ 180 (251)
T ss_dssp HHHHHHHHHHHHH---TCCSEEEEEETHHHH----HHHHHHHHST------TTCSEEEEESCCCCSCC------------
T ss_pred HHHHHHHHHHhcc---CCCcEEEEEECHHHH----HHHHHHHhCC------cccCeEEEEecCCCccc------------
Confidence 7777777776655 346899999999994 4544444332 25899999988865431
Q ss_pred CCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCCCCcHH
Q 042005 255 ALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKPQTVLP 334 (432)
Q Consensus 255 glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~~~~~~ 334 (432)
....
T Consensus 181 ---------------------------------------------~~~~------------------------------- 184 (251)
T 2r8b_A 181 ---------------------------------------------KISP------------------------------- 184 (251)
T ss_dssp ---------------------------------------------CCCC-------------------------------
T ss_pred ---------------------------------------------cccc-------------------------------
Confidence 0000
Q ss_pred HHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChH
Q 042005 335 IIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPA 414 (432)
Q Consensus 335 ~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~ 414 (432)
. ....+|||.+|+.|.+++....+++.+.|.= .| ..+.+ .++++||+.+.+.++
T Consensus 185 ---~--~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~---------------~~-----~~~~~-~~~~~gH~~~~~~~~ 238 (251)
T 2r8b_A 185 ---A--KPTRRVLITAGERDPICPVQLTKALEESLKA---------------QG-----GTVET-VWHPGGHEIRSGEID 238 (251)
T ss_dssp ---C--CTTCEEEEEEETTCTTSCHHHHHHHHHHHHH---------------HS-----SEEEE-EEESSCSSCCHHHHH
T ss_pred ---c--ccCCcEEEeccCCCccCCHHHHHHHHHHHHH---------------cC-----CeEEE-EecCCCCccCHHHHH
Confidence 0 0147999999999999999888888887640 00 12344 789999999888887
Q ss_pred HHHHHHHHHHc
Q 042005 415 RALVLFSSFIN 425 (432)
Q Consensus 415 ~a~~m~~~fl~ 425 (432)
...+.|++++.
T Consensus 239 ~~~~~l~~~l~ 249 (251)
T 2r8b_A 239 AVRGFLAAYGG 249 (251)
T ss_dssp HHHHHHGGGC-
T ss_pred HHHHHHHHhcC
Confidence 77777766654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.17 E-value=4.4e-05 Score=81.87 Aligned_cols=244 Identities=14% Similarity=0.097 Sum_probs=133.5
Q ss_pred EEecCCCCceEEEEEEEcCC--CCCCCCeEEEEcCCCChhhh-----hHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcc
Q 042005 94 VNVDSQDGRSLFYYFVESPQ--NSSSKPLVLWLNGGPGFSSF-----GAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKV 166 (432)
Q Consensus 94 l~v~~~~~~~lFywf~es~~--~p~~~PlilWlnGGPGcSSl-----~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~ 166 (432)
+.+....+..+.+|++...+ .....|+||++-||||.+.. ....|.+.|=..+..|-..-.....+|.+.-..
T Consensus 420 ~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~ 499 (695)
T 2bkl_A 420 VFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRL 499 (695)
T ss_dssp EEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSG
T ss_pred EEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHh
Confidence 44433346678888775543 23568999999999987641 123356666444332211001111223321111
Q ss_pred cCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchh
Q 042005 167 NGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKG 246 (432)
Q Consensus 167 ~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~ 246 (432)
.......+|+..+++...+. +.....++.|.|.|+|| .+|..+..+.. -.++++++..|++|......
T Consensus 500 ~~~~~~~~D~~~~~~~l~~~-~~~~~~~i~i~G~S~GG----~la~~~~~~~p------~~~~~~v~~~~~~d~~~~~~- 567 (695)
T 2bkl_A 500 DKKQNVFDDFHAAAEYLVQQ-KYTQPKRLAIYGGSNGG----LLVGAAMTQRP------ELYGAVVCAVPLLDMVRYHL- 567 (695)
T ss_dssp GGTHHHHHHHHHHHHHHHHT-TSCCGGGEEEEEETHHH----HHHHHHHHHCG------GGCSEEEEESCCCCTTTGGG-
T ss_pred hcCCCcHHHHHHHHHHHHHc-CCCCcccEEEEEECHHH----HHHHHHHHhCC------cceEEEEEcCCccchhhccc-
Confidence 12234567777766655544 33345679999999999 56666665532 24799999999988643211
Q ss_pred hHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccc
Q 042005 247 TVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWK 326 (432)
Q Consensus 247 ~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~ 326 (432)
+ .+........ . .+ ..... .+.+... ++++-...
T Consensus 568 ---~-----~~~~~~~~~~----g--~~-~~~~~----~~~~~~~----sp~~~~~~----------------------- 601 (695)
T 2bkl_A 568 ---F-----GSGRTWIPEY----G--TA-EKPED----FKTLHAY----SPYHHVRP----------------------- 601 (695)
T ss_dssp ---S-----TTGGGGHHHH----C--CT-TSHHH----HHHHHHH----CGGGCCCS-----------------------
T ss_pred ---c-----CCCcchHHHh----C--CC-CCHHH----HHHHHhc----ChHhhhhh-----------------------
Confidence 0 0000000010 0 00 01111 1111111 11111000
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcc
Q 042005 327 DKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGH 406 (432)
Q Consensus 327 d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGH 406 (432)
+....++||.+|+.|.+|+....+.+.+.|.=.+. . -....+.++.+|||
T Consensus 602 -------------~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~------------~-----~~~~~~~~~~~~gH 651 (695)
T 2bkl_A 602 -------------DVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPG------------N-----PATALLRIEANAGH 651 (695)
T ss_dssp -------------SCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTT------------C-----CSCEEEEEETTCBT
T ss_pred -------------cCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhcc------------C-----CCCEEEEEeCCCCc
Confidence 00125999999999999999999999988851000 0 02467888999999
Q ss_pred cc--cccChHHHHHHHHHHHc
Q 042005 407 FV--PSYQPARALVLFSSFIN 425 (432)
Q Consensus 407 mv--P~dqP~~a~~m~~~fl~ 425 (432)
.. |..++......+..|+.
T Consensus 652 ~~~~~~~~~~~~~~~~~~fl~ 672 (695)
T 2bkl_A 652 GGADQVAKAIESSVDLYSFLF 672 (695)
T ss_dssp TBCSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH
Confidence 98 55566666666666663
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=98.17 E-value=8.8e-05 Score=65.35 Aligned_cols=59 Identities=15% Similarity=0.168 Sum_probs=48.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc----cChHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS----YQPARALV 418 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~----dqP~~a~~ 418 (432)
..+||+.+|+.|.++|....+++.+.++ .++..+.++||+.+. +.|+.. +
T Consensus 125 ~~P~lii~g~~D~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~gH~~~~~~~~~~~~~~-~ 178 (191)
T 3bdv_A 125 SVPTLTFASHNDPLMSFTRAQYWAQAWD-------------------------SELVDVGEAGHINAEAGFGPWEYGL-K 178 (191)
T ss_dssp SSCEEEEECSSBTTBCHHHHHHHHHHHT-------------------------CEEEECCSCTTSSGGGTCSSCHHHH-H
T ss_pred CCCEEEEecCCCCcCCHHHHHHHHHhcC-------------------------CcEEEeCCCCcccccccchhHHHHH-H
Confidence 4799999999999999988777776642 356888999999988 667766 9
Q ss_pred HHHHHHcCC
Q 042005 419 LFSSFINGT 427 (432)
Q Consensus 419 m~~~fl~~~ 427 (432)
.+.+|+...
T Consensus 179 ~i~~fl~~~ 187 (191)
T 3bdv_A 179 RLAEFSEIL 187 (191)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999999653
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.16 E-value=4e-05 Score=71.30 Aligned_cols=59 Identities=10% Similarity=0.198 Sum_probs=49.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+..|+.|.+++....+ +.+.+ .+..+.++.+|||+++.++|+...+.+.+
T Consensus 207 ~~P~lii~G~~D~~~~~~~~~-~~~~~------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 261 (269)
T 2xmz_A 207 KVPTLILAGEYDEKFVQIAKK-MANLI------------------------PNSKCKLISATGHTIHVEDSDEFDTMILG 261 (269)
T ss_dssp CSCEEEEEETTCHHHHHHHHH-HHHHS------------------------TTEEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcccCHHHHH-HHhhC------------------------CCcEEEEeCCCCCChhhcCHHHHHHHHHH
Confidence 589999999999999876543 44433 35678999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 262 fl~~ 265 (269)
T 2xmz_A 262 FLKE 265 (269)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9953
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=98.14 E-value=0.0001 Score=70.62 Aligned_cols=62 Identities=13% Similarity=0.256 Sum_probs=51.3
Q ss_pred CCeEEEEecCCccccCch-hHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVT-CTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~-Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
..+||+++|+.|.+++.. ..+.+.+.+.= .+...++++.++||+.+.++|+...+.+.
T Consensus 210 ~~P~lii~G~~D~~~~~~~~~~~~~~~l~~---------------------~~~~~~~~~~g~gH~~~~~~~~~~~~~i~ 268 (306)
T 3vis_A 210 TVPTLIIGAEYDTIASVTLHSKPFYNSIPS---------------------PTDKAYLELDGASHFAPNITNKTIGMYSV 268 (306)
T ss_dssp CSCEEEEEETTCSSSCTTTTHHHHHHTCCT---------------------TSCEEEEEETTCCTTGGGSCCHHHHHHHH
T ss_pred CCCEEEEecCCCcccCcchhHHHHHHHhcc---------------------CCCceEEEECCCCccchhhchhHHHHHHH
Confidence 479999999999999998 48888887750 01457789999999999999999888888
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 269 ~fl~ 272 (306)
T 3vis_A 269 AWLK 272 (306)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8874
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=98.13 E-value=0.00012 Score=77.20 Aligned_cols=232 Identities=16% Similarity=0.096 Sum_probs=125.5
Q ss_pred CCceEEEEEEEcCC------CCCCCCeEEEEcCCCChhh------hhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCccc
Q 042005 100 DGRSLFYYFVESPQ------NSSSKPLVLWLNGGPGFSS------FGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVN 167 (432)
Q Consensus 100 ~~~~lFywf~es~~------~p~~~PlilWlnGGPGcSS------l~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~ 167 (432)
.+..+..|++...+ .....|+||++.|||+.+. + .-.|.+.|=..+..|-..-...-.+|.+.....
T Consensus 400 dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~ 478 (662)
T 3azo_A 400 DGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLD-VAYFTSRGIGVADVNYGGSTGYGRAYRERLRGR 478 (662)
T ss_dssp TSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHH-HHHHHTTTCEEEEEECTTCSSSCHHHHHTTTTT
T ss_pred CCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHH-HHHHHhCCCEEEEECCCCCCCccHHHHHhhccc
Confidence 45678888875543 1246799999999998764 2 244556664333222110000011111100000
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccch-h
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMK-G 246 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~-~ 246 (432)
-.....+|+.+++....+. +.....+++|+|+||||. +|..++.+. -.++++++..|.+|...... .
T Consensus 479 ~~~~~~~d~~~~~~~l~~~-~~~~~~~i~l~G~S~GG~----~a~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~ 546 (662)
T 3azo_A 479 WGVVDVEDCAAVATALAEE-GTADRARLAVRGGSAGGW----TAASSLVST-------DVYACGTVLYPVLDLLGWADGG 546 (662)
T ss_dssp TTTHHHHHHHHHHHHHHHT-TSSCTTCEEEEEETHHHH----HHHHHHHHC-------CCCSEEEEESCCCCHHHHHTTC
T ss_pred cccccHHHHHHHHHHHHHc-CCcChhhEEEEEECHHHH----HHHHHHhCc-------CceEEEEecCCccCHHHHhccc
Confidence 0123456777766655544 345567899999999994 555544432 14788999888876542111 0
Q ss_pred hHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccc
Q 042005 247 TVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWK 326 (432)
Q Consensus 247 ~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~ 326 (432)
...+. ..+ +..... .. ... .+.+.. + .
T Consensus 547 ~~~~~--------~~~--~~~~~~--~~-~~~------~~~~~~-------~---s------------------------ 573 (662)
T 3azo_A 547 THDFE--------SRY--LDFLIG--SF-EEF------PERYRD-------R---A------------------------ 573 (662)
T ss_dssp SCGGG--------TTH--HHHHTC--CT-TTC------HHHHHH-------T---C------------------------
T ss_pred ccchh--------hHh--HHHHhC--CC-ccc------hhHHHh-------h---C------------------------
Confidence 00000 000 000000 00 000 000000 0 0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcc
Q 042005 327 DKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGH 406 (432)
Q Consensus 327 d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGH 406 (432)
... .+-+-..+|||.+|+.|.+||....+++.+.|.=.+ ....++++.++||
T Consensus 574 -----p~~---~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g--------------------~~~~~~~~~~~gH 625 (662)
T 3azo_A 574 -----PLT---RADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCG--------------------VPHAYLSFEGEGH 625 (662)
T ss_dssp -----GGG---GGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSC--------------------CCEEEEEETTCCS
T ss_pred -----hHh---HhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcC--------------------CCEEEEEECCCCC
Confidence 000 111124799999999999999999999999886111 2467889999999
Q ss_pred cccc-cChHHHHHHHHHHHc
Q 042005 407 FVPS-YQPARALVLFSSFIN 425 (432)
Q Consensus 407 mvP~-dqP~~a~~m~~~fl~ 425 (432)
.... +.++...+.+.+|+.
T Consensus 626 ~~~~~~~~~~~~~~~~~fl~ 645 (662)
T 3azo_A 626 GFRRKETMVRALEAELSLYA 645 (662)
T ss_dssp SCCSHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHH
Confidence 8743 456677777777764
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=98.13 E-value=9.2e-05 Score=68.42 Aligned_cols=60 Identities=15% Similarity=0.247 Sum_probs=51.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+..|+.|.+++....+.+.+.+ .+.+++++.+|||+++.++|+...+.+.+
T Consensus 195 ~~P~l~i~G~~D~~~~~~~~~~~~~~~------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 250 (255)
T 3bf7_A 195 DHPALFIPGGNSPYVSEQYRDDLLAQF------------------------PQARAHVIAGAGHWVHAEKPDAVLRAIRR 250 (255)
T ss_dssp CSCEEEECBTTCSTTCGGGHHHHHHHC------------------------TTEEECCBTTCCSCHHHHCHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHC------------------------CCCeEEEeCCCCCccccCCHHHHHHHHHH
Confidence 479999999999999887766665553 35678899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 251 fl~~ 254 (255)
T 3bf7_A 251 YLND 254 (255)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9964
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=98.12 E-value=0.0002 Score=64.26 Aligned_cols=65 Identities=17% Similarity=0.314 Sum_probs=53.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcC-CCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLG-TPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~-w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
..+||+.+|+.|.+++....+.+.+.+. =.+. .+.++.++.++||+.+.+.|+...+.|+
T Consensus 172 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~H~~~~~~~~~~~~~l~ 232 (238)
T 1ufo_A 172 GVPLLHLHGSRDHIVPLARMEKTLEALRPHYPE-------------------GRLARFVEEGAGHTLTPLMARVGLAFLE 232 (238)
T ss_dssp TCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTT-------------------CCEEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCccCcHHHHHHHHHHhhcCCC-------------------CceEEEEeCCCCcccHHHHHHHHHHHHH
Confidence 5899999999999999998888887753 0000 1568899999999999999999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+|+..
T Consensus 233 ~~l~~ 237 (238)
T 1ufo_A 233 HWLEA 237 (238)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99864
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=98.11 E-value=3.1e-05 Score=83.69 Aligned_cols=228 Identities=13% Similarity=0.109 Sum_probs=129.7
Q ss_pred CCceEEEEEEEcCC--CCCCCCeEEEEcCCCChhh--------hhHhhhh-hcCCeEEcCCCCeeecCCCCCCC-CCccc
Q 042005 100 DGRSLFYYFVESPQ--NSSSKPLVLWLNGGPGFSS--------FGAGTMM-ELGPFRVNKDGKTLYQNEYAWNK-DYKVN 167 (432)
Q Consensus 100 ~~~~lFywf~es~~--~p~~~PlilWlnGGPGcSS--------l~~G~f~-E~GP~~~~~~~~~l~~N~~SW~~-~~~~~ 167 (432)
.+..+.++++...+ .....|+||++-||||+.. . ...+. +.|=..+..|...--.....|.+ .+...
T Consensus 482 dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~-~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~ 560 (740)
T 4a5s_A 482 NETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNW-ATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL 560 (740)
T ss_dssp TTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSH-HHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCT
T ss_pred CCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCH-HHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhh
Confidence 35678888876543 2356799999999999842 2 12333 46755554443211000111111 11111
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhh
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGT 247 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~ 247 (432)
. ....+|+..+++ ++...+.....++.|+|.|||| ++|..+..+.. -.+++++...|.+|.......+
T Consensus 561 ~-~~~~~D~~~~i~-~l~~~~~~d~~ri~i~G~S~GG----~~a~~~a~~~p------~~~~~~v~~~p~~~~~~~~~~~ 628 (740)
T 4a5s_A 561 G-TFEVEDQIEAAR-QFSKMGFVDNKRIAIWGWSYGG----YVTSMVLGSGS------GVFKCGIAVAPVSRWEYYDSVY 628 (740)
T ss_dssp T-SHHHHHHHHHHH-HHHTSTTEEEEEEEEEEETHHH----HHHHHHHTTTC------SCCSEEEEESCCCCGGGSBHHH
T ss_pred C-cccHHHHHHHHH-HHHhcCCcCCccEEEEEECHHH----HHHHHHHHhCC------CceeEEEEcCCccchHHhhhHH
Confidence 1 134566666665 4445554455689999999999 66666665432 2578999999988754221100
Q ss_pred HHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCcccccccccc
Q 042005 248 VDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKD 327 (432)
Q Consensus 248 ~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d 327 (432)
. +.+. ..... .... +.+.. .+.
T Consensus 629 ~--------------~~~~---~~p~~-~~~~------~~~~~-------~~~--------------------------- 650 (740)
T 4a5s_A 629 T--------------ERYM---GLPTP-EDNL------DHYRN-------STV--------------------------- 650 (740)
T ss_dssp H--------------HHHH---CCSST-TTTH------HHHHH-------SCS---------------------------
T ss_pred H--------------HHHc---CCCCc-cccH------HHHHh-------CCH---------------------------
Confidence 0 0000 00000 0000 00000 000
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccc
Q 042005 328 KPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHF 407 (432)
Q Consensus 328 ~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHm 407 (432)
...++.+ +..++||.+|..|.+|+...++++.+.|.=.+ ....+..+.++||.
T Consensus 651 -----~~~~~~i--~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g--------------------~~~~~~~~~~~~H~ 703 (740)
T 4a5s_A 651 -----MSRAENF--KQVEYLLIHGTADDNVHFQQSAQISKALVDVG--------------------VDFQAMWYTDEDHG 703 (740)
T ss_dssp -----GGGGGGG--GGSEEEEEEETTCSSSCTHHHHHHHHHHHHTT--------------------CCCEEEEETTCCTT
T ss_pred -----HHHHhcC--CCCcEEEEEcCCCCccCHHHHHHHHHHHHHCC--------------------CCeEEEEECCCCCc
Confidence 0001111 12489999999999999999999988874110 14678999999999
Q ss_pred c-cccChHHHHHHHHHHHc
Q 042005 408 V-PSYQPARALVLFSSFIN 425 (432)
Q Consensus 408 v-P~dqP~~a~~m~~~fl~ 425 (432)
. ....++..++.+.+|+.
T Consensus 704 ~~~~~~~~~~~~~i~~fl~ 722 (740)
T 4a5s_A 704 IASSTAHQHIYTHMSHFIK 722 (740)
T ss_dssp CCSHHHHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHH
Confidence 8 66778888888888875
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=98.11 E-value=8.2e-05 Score=69.06 Aligned_cols=62 Identities=21% Similarity=0.298 Sum_probs=52.2
Q ss_pred CCeEEEEecCCccccCchh-HHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTC-TRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~G-t~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
..+||+.+|+.|.+++... .+.+.+.+. . ..+.++..+.++||+.+.++|+...+.+.
T Consensus 166 ~~P~l~i~G~~D~~~~~~~~~~~~~~~l~--~-------------------~~~~~~~~~~~~~H~~~~~~~~~~~~~i~ 224 (262)
T 1jfr_A 166 RTPTLVVGADGDTVAPVATHSKPFYESLP--G-------------------SLDKAYLELRGASHFTPNTSDTTIAKYSI 224 (262)
T ss_dssp CSCEEEEEETTCSSSCTTTTHHHHHHHSC--T-------------------TSCEEEEEETTCCTTGGGSCCHHHHHHHH
T ss_pred CCCEEEEecCccccCCchhhHHHHHHHhh--c-------------------CCCceEEEeCCCCcCCcccchHHHHHHHH
Confidence 4799999999999999998 888888874 0 02357788999999999999999888888
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 225 ~fl~ 228 (262)
T 1jfr_A 225 SWLK 228 (262)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=98.10 E-value=0.00013 Score=70.67 Aligned_cols=127 Identities=13% Similarity=0.135 Sum_probs=72.3
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHh---hhhhcCCeEE--cCCCCeeecCC-CCCC--C--CCcccC-
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAG---TMMELGPFRV--NKDGKTLYQNE-YAWN--K--DYKVNG- 168 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G---~f~E~GP~~~--~~~~~~l~~N~-~SW~--~--~~~~~~- 168 (432)
.+..+.+|++...+ ....|+||++.|++|.+.. +. .+.+.|=-.+ +.-|..-...+ .... . ++...+
T Consensus 91 ~g~~l~~~~~~P~~-~~~~p~vv~~HG~g~~~~~-~~~~~~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g~ 168 (346)
T 3fcy_A 91 RGARIHAKYIKPKT-EGKHPALIRFHGYSSNSGD-WNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGL 168 (346)
T ss_dssp GGCEEEEEEEEESC-SSCEEEEEEECCTTCCSCC-SGGGHHHHTTTCEEEEECCTTSSSSCCCCCCCSSCCSBCSSSTTT
T ss_pred CCCEEEEEEEecCC-CCCcCEEEEECCCCCCCCC-hhhhhHHHhCCcEEEEEcCCCCCCCCCCCcccCCCCcCcceeccc
Confidence 35678888886654 4667999999999988764 23 2334452222 22111101000 0000 0 000000
Q ss_pred --------ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 169 --------DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 169 --------~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
-.....|...++ +|+...++....++.|+|.|+|| .+|..+..... .++++++.+|+++.
T Consensus 169 ~~~~~~~~~~~~~~D~~~a~-~~l~~~~~~d~~~i~l~G~S~GG----~la~~~a~~~p-------~v~~~vl~~p~~~~ 236 (346)
T 3fcy_A 169 DDDADNMLFRHIFLDTAQLA-GIVMNMPEVDEDRVGVMGPSQGG----GLSLACAALEP-------RVRKVVSEYPFLSD 236 (346)
T ss_dssp TSCGGGCHHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHH----HHHHHHHHHST-------TCCEEEEESCSSCC
T ss_pred cCCHHHHHHHHHHHHHHHHH-HHHHhCCCCCcCcEEEEEcCHHH----HHHHHHHHhCc-------cccEEEECCCcccC
Confidence 012345555544 46666777766789999999999 55555554431 28999999887653
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=98.09 E-value=4e-05 Score=69.17 Aligned_cols=126 Identities=12% Similarity=0.110 Sum_probs=70.4
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhh-hhc--CCeEEcCCCCeeecCCCCCCCCC-----cccCChhh
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTM-MEL--GPFRVNKDGKTLYQNEYAWNKDY-----KVNGDIRT 172 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f-~E~--GP~~~~~~~~~l~~N~~SW~~~~-----~~~~~~~~ 172 (432)
+..+.|++.+... ...|+||+|-|+.|.+.. +.-+ ... |=-.+-.+.+......++|.... ...+-...
T Consensus 15 ~~~l~~~~~~~~~--~~~p~vv~lHG~g~~~~~-~~~~~~~l~~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 91 (223)
T 3b5e_A 15 DLAFPYRLLGAGK--ESRECLFLLHGSGVDETT-LVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAE 91 (223)
T ss_dssp SSSSCEEEESTTS--SCCCEEEEECCTTBCTTT-THHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHH
T ss_pred CCCceEEEeCCCC--CCCCEEEEEecCCCCHHH-HHHHHHhcCCCceEEEeCCCCCcCCccccccccCCCcccHHHHHHH
Confidence 3467888876543 234999999999887754 2322 222 22222233221111124554310 00111345
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 173 ARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 173 a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
++++.+++....+++ .....+++|+|+|.||. +|..+..+.. -.++++++.+|....
T Consensus 92 ~~~~~~~i~~~~~~~-~~~~~~i~l~G~S~Gg~----~a~~~a~~~~------~~~~~~v~~~~~~~~ 148 (223)
T 3b5e_A 92 TAAFAAFTNEAAKRH-GLNLDHATFLGYSNGAN----LVSSLMLLHP------GIVRLAALLRPMPVL 148 (223)
T ss_dssp HHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHH----HHHHHHHHST------TSCSEEEEESCCCCC
T ss_pred HHHHHHHHHHHHHHh-CCCCCcEEEEEECcHHH----HHHHHHHhCc------cccceEEEecCccCc
Confidence 566666666665554 34456899999999994 4544444432 257899988887543
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=98.08 E-value=0.00011 Score=69.21 Aligned_cols=60 Identities=17% Similarity=0.159 Sum_probs=46.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||.+|..|.+++....+.+.+.+. ...++.++.++||..+.+..+...+.|++
T Consensus 258 ~~P~li~~g~~D~~~~~~~~~~~~~~l~-----------------------~~~~~~~~~~~~H~~~~~~~~~~~~fl~~ 314 (318)
T 1l7a_A 258 KVPVLMSIGLIDKVTPPSTVFAAYNHLE-----------------------TKKELKVYRYFGHEYIPAFQTEKLAFFKQ 314 (318)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHCC-----------------------SSEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeccCCCCCCcccHHHHHhhcC-----------------------CCeeEEEccCCCCCCcchhHHHHHHHHHH
Confidence 4899999999999999999888888875 12567889999999655555555566665
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
++.
T Consensus 315 ~l~ 317 (318)
T 1l7a_A 315 ILK 317 (318)
T ss_dssp HHC
T ss_pred HhC
Confidence 554
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=5.7e-05 Score=68.32 Aligned_cols=60 Identities=17% Similarity=0.125 Sum_probs=47.0
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.+++....+.+.+.+.=. | .+.++..+. +||..+.+.++...+.|++
T Consensus 166 ~~P~lii~G~~D~~~~~~~~~~~~~~l~~~---------------g-----~~~~~~~~~-~gH~~~~~~~~~i~~~l~~ 224 (226)
T 3cn9_A 166 RIPVLHLHGSQDDVVDPALGRAAHDALQAQ---------------G-----VEVGWHDYP-MGHEVSLEEIHDIGAWLRK 224 (226)
T ss_dssp GCCEEEEEETTCSSSCHHHHHHHHHHHHHT---------------T-----CCEEEEEES-CCSSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCccCHHHHHHHHHHHHHc---------------C-----CceeEEEec-CCCCcchhhHHHHHHHHHh
Confidence 479999999999999999888888876400 0 157888899 9999988887776666655
Q ss_pred H
Q 042005 423 F 423 (432)
Q Consensus 423 f 423 (432)
+
T Consensus 225 ~ 225 (226)
T 3cn9_A 225 R 225 (226)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00017 Score=69.24 Aligned_cols=61 Identities=8% Similarity=0.172 Sum_probs=52.3
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-.++|||..|+.|.++|....+.+.+.+. +.+++++.+|||+++.++|+...+++.
T Consensus 240 i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p------------------------~~~~~~i~~~GH~~~~e~p~~~~~~i~ 295 (316)
T 3afi_E 240 SSYPKLLFTGEPGALVSPEFAERFAASLT------------------------RCALIRLGAGLHYLQEDHADAIGRSVA 295 (316)
T ss_dssp CCSCEEEEEEEECSSSCHHHHHHHHHHSS------------------------SEEEEEEEEECSCHHHHHHHHHHHHHH
T ss_pred cCCCeEEEecCCCCccCHHHHHHHHHhCC------------------------CCeEEEcCCCCCCchhhCHHHHHHHHH
Confidence 36899999999999999876666666543 567889999999999999999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+|+..
T Consensus 296 ~fl~~ 300 (316)
T 3afi_E 296 GWIAG 300 (316)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99964
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.05 E-value=5.7e-05 Score=80.72 Aligned_cols=227 Identities=13% Similarity=0.134 Sum_probs=126.2
Q ss_pred ceEEEEEEEcCC--CCCCCCeEEEEcCCCChhh--------hhHhhh-hhcCCeEEcCCCCeeecCCCCCCCCCcccCCh
Q 042005 102 RSLFYYFVESPQ--NSSSKPLVLWLNGGPGFSS--------FGAGTM-MELGPFRVNKDGKTLYQNEYAWNKDYKVNGDI 170 (432)
Q Consensus 102 ~~lFywf~es~~--~p~~~PlilWlnGGPGcSS--------l~~G~f-~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~ 170 (432)
..+.++++...+ .....|+||++.|||+.+. .. ..+ .+.|=-.+..|....-.....|.+.....-..
T Consensus 478 ~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~-~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~ 556 (719)
T 1z68_A 478 ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWI-SYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGV 556 (719)
T ss_dssp EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHH-HHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTH
T ss_pred eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHH-HHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCc
Confidence 678888776543 2356799999999999853 21 222 35664333322110000011111100000112
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHH
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDF 250 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~ 250 (432)
...+|+..++.... ..+.....+++|+|+|+|| .+|..+..+.. -.++++++.+|..+.......+.
T Consensus 557 ~~~~d~~~~~~~l~-~~~~~d~~~i~l~G~S~GG----~~a~~~a~~~p------~~~~~~v~~~~~~~~~~~~~~~~-- 623 (719)
T 1z68_A 557 YEVEDQITAVRKFI-EMGFIDEKRIAIWGWSYGG----YVSSLALASGT------GLFKCGIAVAPVSSWEYYASVYT-- 623 (719)
T ss_dssp HHHHHHHHHHHHHH-TTSCEEEEEEEEEEETHHH----HHHHHHHTTSS------SCCSEEEEESCCCCTTTSBHHHH--
T ss_pred ccHHHHHHHHHHHH-hcCCCCCceEEEEEECHHH----HHHHHHHHhCC------CceEEEEEcCCccChHHhccccc--
Confidence 34566666555443 3444545689999999999 56666655432 25889999999887542110000
Q ss_pred HHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCCC
Q 042005 251 YWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKPQ 330 (432)
Q Consensus 251 ~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~~ 330 (432)
+.+. ..... ... ...+.. ++..
T Consensus 624 ------------~~~~---g~~~~-~~~------~~~~~~-------~~~~----------------------------- 645 (719)
T 1z68_A 624 ------------ERFM---GLPTK-DDN------LEHYKN-------STVM----------------------------- 645 (719)
T ss_dssp ------------HHHH---CCSST-TTT------HHHHHH-------TCSG-----------------------------
T ss_pred ------------hhhc---CCccc-ccc------hhhhhh-------CCHh-----------------------------
Confidence 0000 00000 000 000000 0000
Q ss_pred CcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc
Q 042005 331 TVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS 410 (432)
Q Consensus 331 ~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~ 410 (432)
..++.+ +..++||.+|+.|.+|+...++++.+.|.-.+ ....+.++.++||+...
T Consensus 646 ---~~~~~~--~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~--------------------~~~~~~~~~~~gH~~~~ 700 (719)
T 1z68_A 646 ---ARAEYF--RNVDYLLIHGTADDNVHFQNSAQIAKALVNAQ--------------------VDFQAMWYSDQNHGLSG 700 (719)
T ss_dssp ---GGGGGG--TTSEEEEEEETTCSSSCTHHHHHHHHHHHHTT--------------------CCCEEEEETTCCTTCCT
T ss_pred ---HHHhcC--CCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCC--------------------CceEEEEECcCCCCCCc
Confidence 001111 12389999999999999999999988874110 14678899999999976
Q ss_pred cChHHHHHHHHHHHc
Q 042005 411 YQPARALVLFSSFIN 425 (432)
Q Consensus 411 dqP~~a~~m~~~fl~ 425 (432)
++|+...+.+.+|+.
T Consensus 701 ~~~~~~~~~i~~fl~ 715 (719)
T 1z68_A 701 LSTNHLYTHMTHFLK 715 (719)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHH
Confidence 778999999999885
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=98.04 E-value=0.00036 Score=68.99 Aligned_cols=220 Identities=12% Similarity=0.113 Sum_probs=119.7
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChhh----hhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHH
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFSS----FGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDS 176 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcSS----l~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~ 176 (432)
+..+..|++...+. ...|+||++.|++|... . .-.|.+.|=-.+..|-.. +.-.... ........+.
T Consensus 136 g~~i~~~l~~p~~~-~~~P~vl~~hG~~~~~~~~~~~-~~~l~~~G~~v~~~d~rG-----~G~s~~~--~~~~~~~~~~ 206 (386)
T 2jbw_A 136 GIPMPVYVRIPEGP-GPHPAVIMLGGLESTKEESFQM-ENLVLDRGMATATFDGPG-----QGEMFEY--KRIAGDYEKY 206 (386)
T ss_dssp TEEEEEEEECCSSS-CCEEEEEEECCSSCCTTTTHHH-HHHHHHTTCEEEEECCTT-----SGGGTTT--CCSCSCHHHH
T ss_pred CEEEEEEEEcCCCC-CCCCEEEEeCCCCccHHHHHHH-HHHHHhCCCEEEEECCCC-----CCCCCCC--CCCCccHHHH
Confidence 57788888855432 56799998866655543 2 134455553333222110 0000000 0011112222
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhcCC
Q 042005 177 YTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHAL 256 (432)
Q Consensus 177 ~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~gl 256 (432)
...+.+|+...+.....++.|.|.|+||.. |..+..+. -.++++++. |..+.......
T Consensus 207 ~~~~~~~l~~~~~~~~~~i~l~G~S~GG~l----a~~~a~~~-------~~~~a~v~~-~~~~~~~~~~~---------- 264 (386)
T 2jbw_A 207 TSAVVDLLTKLEAIRNDAIGVLGRSLGGNY----ALKSAACE-------PRLAACISW-GGFSDLDYWDL---------- 264 (386)
T ss_dssp HHHHHHHHHHCTTEEEEEEEEEEETHHHHH----HHHHHHHC-------TTCCEEEEE-SCCSCSTTGGG----------
T ss_pred HHHHHHHHHhCCCcCcccEEEEEEChHHHH----HHHHHcCC-------cceeEEEEe-ccCChHHHHHh----------
Confidence 344555666667666678999999999954 44444432 158888888 88776433211
Q ss_pred CCHHHHHhHhhhcccccCCCChHHHHHHH-HHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCCCCcHHH
Q 042005 257 MPDEIYHGLTSSYNFASLNSSDKVCLEFI-DQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKPQTVLPI 335 (432)
Q Consensus 257 I~~~~~~~~~~~C~~~~~~~~~~~C~~~~-~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~~~~~~~ 335 (432)
++............. .... ... ..+. .|+... .
T Consensus 265 ~~~~~~~~~~~~~g~----~~~~---~~~~~~~~-------~~~~~~--------------------------------~ 298 (386)
T 2jbw_A 265 ETPLTKESWKYVSKV----DTLE---EARLHVHA-------ALETRD--------------------------------V 298 (386)
T ss_dssp SCHHHHHHHHHHTTC----SSHH---HHHHHHHH-------HTCCTT--------------------------------T
T ss_pred ccHHHHHHHHHHhCC----CCHH---HHHHHHHH-------hCChhh--------------------------------h
Confidence 111111111110000 0000 011 1111 011110 0
Q ss_pred HHHHHHcCCeEEEEecCCccccCchhHHHHHHhc-CCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChH
Q 042005 336 IQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKL-GTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPA 414 (432)
Q Consensus 336 l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L-~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~ 414 (432)
++ +-..+|||.+|+.|. |+....+.+.+.| . .+.+++.+.++||.. .++|+
T Consensus 299 ~~---~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~-----------------------~~~~~~~~~~~gH~~-~~~~~ 350 (386)
T 2jbw_A 299 LS---QIACPTYILHGVHDE-VPLSFVDTVLELVPA-----------------------EHLNLVVEKDGDHCC-HNLGI 350 (386)
T ss_dssp GG---GCCSCEEEEEETTSS-SCTHHHHHHHHHSCG-----------------------GGEEEEEETTCCGGG-GGGTT
T ss_pred hc---ccCCCEEEEECCCCC-CCHHHHHHHHHHhcC-----------------------CCcEEEEeCCCCcCC-ccchH
Confidence 00 114799999999999 9998888888887 3 156789999999975 56777
Q ss_pred HHHHHHHHHHc
Q 042005 415 RALVLFSSFIN 425 (432)
Q Consensus 415 ~a~~m~~~fl~ 425 (432)
...+.+.+|+.
T Consensus 351 ~~~~~i~~fl~ 361 (386)
T 2jbw_A 351 RPRLEMADWLY 361 (386)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888888874
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=5.2e-05 Score=67.63 Aligned_cols=61 Identities=16% Similarity=0.129 Sum_probs=50.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.+++....+.+.+.+.-.+ .+.++..+. +||..+.+.++...+.|++
T Consensus 157 ~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g--------------------~~~~~~~~~-~gH~~~~~~~~~~~~~l~~ 215 (218)
T 1auo_A 157 RIPALCLHGQYDDVVQNAMGRSAFEHLKSRG--------------------VTVTWQEYP-MGHEVLPQEIHDIGAWLAA 215 (218)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHTTT--------------------CCEEEEEES-CSSSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCceecHHHHHHHHHHHHhCC--------------------CceEEEEec-CCCccCHHHHHHHHHHHHH
Confidence 5799999999999999998888888875110 146788889 9999999999888888888
Q ss_pred HH
Q 042005 423 FI 424 (432)
Q Consensus 423 fl 424 (432)
++
T Consensus 216 ~l 217 (218)
T 1auo_A 216 RL 217 (218)
T ss_dssp HH
T ss_pred Hh
Confidence 76
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=98.04 E-value=0.00019 Score=66.95 Aligned_cols=62 Identities=11% Similarity=-0.043 Sum_probs=49.4
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
...+|||.+|+.|.++|...++.+.+.+.=. -.+.++.++.++||+.+.++ ++..+.+.
T Consensus 211 ~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~--------------------~~~~~~~~~~~~gH~~~~~~-~~~~~~i~ 269 (273)
T 1vkh_A 211 FSIDMHLVHSYSDELLTLRQTNCLISCLQDY--------------------QLSFKLYLDDLGLHNDVYKN-GKVAKYIF 269 (273)
T ss_dssp HTCEEEEEEETTCSSCCTHHHHHHHHHHHHT--------------------TCCEEEEEECCCSGGGGGGC-HHHHHHHH
T ss_pred cCCCEEEEecCCcCCCChHHHHHHHHHHHhc--------------------CCceEEEEeCCCcccccccC-hHHHHHHH
Confidence 3589999999999999999888888776400 01467889999999999999 66667777
Q ss_pred HHH
Q 042005 422 SFI 424 (432)
Q Consensus 422 ~fl 424 (432)
+|+
T Consensus 270 ~fl 272 (273)
T 1vkh_A 270 DNI 272 (273)
T ss_dssp HTC
T ss_pred HHc
Confidence 765
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=0.00014 Score=73.48 Aligned_cols=61 Identities=11% Similarity=0.098 Sum_probs=53.2
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEc-CCcccccccChHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVR-GAGHFVPSYQPARALVLF 420 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~-~AGHmvP~dqP~~a~~m~ 420 (432)
-..+|||.+|+.|.+++....+++.+.+. +.+++++. ++||+++.++|+...+.+
T Consensus 380 i~~PvLvi~G~~D~~~p~~~~~~l~~~~p------------------------~~~~~~i~~~~GH~~~~e~p~~~~~~i 435 (444)
T 2vat_A 380 ITQPALIICARSDGLYSFDEHVEMGRSIP------------------------NSRLCVVDTNEGHDFFVMEADKVNDAV 435 (444)
T ss_dssp CCSCEEEEECTTCSSSCHHHHHHHHHHST------------------------TEEEEECCCSCGGGHHHHTHHHHHHHH
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHCC------------------------CcEEEEeCCCCCcchHHhCHHHHHHHH
Confidence 35899999999999999988777777653 56778888 899999999999999999
Q ss_pred HHHHcC
Q 042005 421 SSFING 426 (432)
Q Consensus 421 ~~fl~~ 426 (432)
.+|+..
T Consensus 436 ~~fL~~ 441 (444)
T 2vat_A 436 RGFLDQ 441 (444)
T ss_dssp HHHHTC
T ss_pred HHHHHH
Confidence 999964
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.02 E-value=0.00012 Score=79.09 Aligned_cols=138 Identities=17% Similarity=0.122 Sum_probs=80.6
Q ss_pred EEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhh-----hHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccC
Q 042005 94 VNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSF-----GAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNG 168 (432)
Q Consensus 94 l~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl-----~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~ 168 (432)
+.+....+..+.+|++..++.....|+||++-||||.+.. ....|.+.|=..+..+-..-......|.+......
T Consensus 464 ~~~~~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~ 543 (741)
T 1yr2_A 464 VFYPSKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDK 543 (741)
T ss_dssp EEEECTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGG
T ss_pred EEEEcCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhc
Confidence 3333334667888877654324568999999999987641 12345666644333221000000012332111111
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc
Q 042005 169 DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET 242 (432)
Q Consensus 169 ~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~ 242 (432)
.....+|+..+++...+. +.....++.|.|.|+|| .+|..+..+.. -.++++++..|++|...
T Consensus 544 ~~~~~~D~~~~~~~l~~~-~~~~~~ri~i~G~S~GG----~la~~~~~~~p------~~~~~~v~~~~~~d~~~ 606 (741)
T 1yr2_A 544 KQNVFDDFIAAGEWLIAN-GVTPRHGLAIEGGSNGG----LLIGAVTNQRP------DLFAAASPAVGVMDMLR 606 (741)
T ss_dssp THHHHHHHHHHHHHHHHT-TSSCTTCEEEEEETHHH----HHHHHHHHHCG------GGCSEEEEESCCCCTTS
T ss_pred CCCcHHHHHHHHHHHHHc-CCCChHHEEEEEECHHH----HHHHHHHHhCc------hhheEEEecCCcccccc
Confidence 234567777777665554 33455689999999999 56666665542 24889999999887643
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=9.3e-05 Score=79.45 Aligned_cols=251 Identities=13% Similarity=0.052 Sum_probs=133.3
Q ss_pred EEecCCCCceEEEEEEEcCC--CCCCCCeEEEEcCCCChhhh-----hHhhhhh-cCCeEEcCCCCeeecCCCCCCCCCc
Q 042005 94 VNVDSQDGRSLFYYFVESPQ--NSSSKPLVLWLNGGPGFSSF-----GAGTMME-LGPFRVNKDGKTLYQNEYAWNKDYK 165 (432)
Q Consensus 94 l~v~~~~~~~lFywf~es~~--~p~~~PlilWlnGGPGcSSl-----~~G~f~E-~GP~~~~~~~~~l~~N~~SW~~~~~ 165 (432)
+.+....+..+.+|++...+ .....|+||++-||||.+.. ....|.+ .|=..+..|-..-......|.+...
T Consensus 440 ~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~ 519 (710)
T 2xdw_A 440 IFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGI 519 (710)
T ss_dssp EEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTS
T ss_pred EEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhh
Confidence 44443346678888775543 23568999999999987642 0234566 7744433221100000112332111
Q ss_pred ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccch
Q 042005 166 VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMK 245 (432)
Q Consensus 166 ~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~ 245 (432)
........+|+..+++...+. +.....++.|.|.|+|| .+|..+..+.. -.++++++..|++|......
T Consensus 520 ~~~~~~~~~D~~~~~~~l~~~-~~~~~~~i~i~G~S~GG----~la~~~a~~~p------~~~~~~v~~~~~~d~~~~~~ 588 (710)
T 2xdw_A 520 LANKQNCFDDFQCAAEYLIKE-GYTSPKRLTINGGSNGG----LLVATCANQRP------DLFGCVIAQVGVMDMLKFHK 588 (710)
T ss_dssp GGGTHHHHHHHHHHHHHHHHT-TSCCGGGEEEEEETHHH----HHHHHHHHHCG------GGCSEEEEESCCCCTTTGGG
T ss_pred hhcCCchHHHHHHHHHHHHHc-CCCCcceEEEEEECHHH----HHHHHHHHhCc------cceeEEEEcCCcccHhhccc
Confidence 112234557777776655544 43455689999999999 56666665532 25899999999987643211
Q ss_pred hhHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCcccccccc
Q 042005 246 GTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNW 325 (432)
Q Consensus 246 ~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w 325 (432)
.. +........ ..+ ..... .+.+... ++++... +.
T Consensus 589 ~~---------~~~~~~~~~------g~~-~~~~~----~~~~~~~----sp~~~~~--~~------------------- 623 (710)
T 2xdw_A 589 YT---------IGHAWTTDY------GCS-DSKQH----FEWLIKY----SPLHNVK--LP------------------- 623 (710)
T ss_dssp ST---------TGGGGHHHH------CCT-TSHHH----HHHHHHH----CGGGCCC--CC-------------------
T ss_pred cC---------CChhHHHhC------CCC-CCHHH----HHHHHHh----CcHhhhc--cc-------------------
Confidence 00 000000110 000 01111 1111111 1121100 00
Q ss_pred ccCCCCcHHHHHHHHHcCC-eEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCC
Q 042005 326 KDKPQTVLPIIQELMAEGI-RIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGA 404 (432)
Q Consensus 326 ~d~~~~~~~~l~~LL~~gi-rVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~A 404 (432)
. +-...+ ++||.+|+.|.+|+....+.+.+.|.=.... .+.+| ....+.++.+|
T Consensus 624 -----~-------~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~--------~~~~~-----~~~~~~~~~~~ 678 (710)
T 2xdw_A 624 -----E-------ADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGR--------SRKQN-----NPLLIHVDTKA 678 (710)
T ss_dssp -----S-------STTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTT--------STTCC-----SCEEEEEESSC
T ss_pred -----c-------cccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhcc--------ccCCC-----cCEEEEEeCCC
Confidence 0 001135 9999999999999999999998887410000 00001 24678889999
Q ss_pred ccccccc--ChHHHHHHHHHHHc
Q 042005 405 GHFVPSY--QPARALVLFSSFIN 425 (432)
Q Consensus 405 GHmvP~d--qP~~a~~m~~~fl~ 425 (432)
||..... ++....+.+..|+.
T Consensus 679 gH~~~~~~~~~~~~~~~~~~fl~ 701 (710)
T 2xdw_A 679 GHGAGKPTAKVIEEVSDMFAFIA 701 (710)
T ss_dssp CSSTTCCHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCHHHHHHHHHHHHHHHH
Confidence 9998663 34556666666653
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=98.00 E-value=0.00019 Score=63.09 Aligned_cols=60 Identities=13% Similarity=0.255 Sum_probs=48.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh---HHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP---ARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP---~~a~~m 419 (432)
..+||+.+|+.|.++|....+.+.+.+ +.++..+.++||+.+.++| ....+.
T Consensus 128 ~~P~l~i~g~~D~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 182 (192)
T 1uxo_A 128 AKHRAVIASKDDQIVPFSFSKDLAQQI-------------------------DAALYEVQHGGHFLEDEGFTSLPIVYDV 182 (192)
T ss_dssp EEEEEEEEETTCSSSCHHHHHHHHHHT-------------------------TCEEEEETTCTTSCGGGTCSCCHHHHHH
T ss_pred cCCEEEEecCCCCcCCHHHHHHHHHhc-------------------------CceEEEeCCCcCcccccccccHHHHHHH
Confidence 469999999999999998887777664 2356889999999999887 456888
Q ss_pred HHHHHcCC
Q 042005 420 FSSFINGT 427 (432)
Q Consensus 420 ~~~fl~~~ 427 (432)
+++|+...
T Consensus 183 l~~~l~~~ 190 (192)
T 1uxo_A 183 LTSYFSKE 190 (192)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHh
Confidence 99998653
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=98.00 E-value=0.00021 Score=70.73 Aligned_cols=128 Identities=11% Similarity=0.040 Sum_probs=75.4
Q ss_pred CCceEEEEEEEcCC-C-CCCCCeEEEEcCCCChhhhh---------------HhhhhhcCCeEEcCCCCeeecCCCCCCC
Q 042005 100 DGRSLFYYFVESPQ-N-SSSKPLVLWLNGGPGFSSFG---------------AGTMMELGPFRVNKDGKTLYQNEYAWNK 162 (432)
Q Consensus 100 ~~~~lFywf~es~~-~-p~~~PlilWlnGGPGcSSl~---------------~G~f~E~GP~~~~~~~~~l~~N~~SW~~ 162 (432)
.+..+.++.+...+ + ....|+|||+.||++.+... .+...+.|-+.+..+.........+|..
T Consensus 154 dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~~~~~~~ 233 (380)
T 3doh_A 154 TGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTD 233 (380)
T ss_dssp TCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCSBTTTTC
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcccccccc
Confidence 45688888885543 3 34569999999998653210 0112233334444443211122233543
Q ss_pred CCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 163 DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 163 ~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
............++.++++...+.++ ....+++|+|+|+|| .+|..+..... -.++++++.+|..
T Consensus 234 ~~~~~~~~~~~~d~~~~i~~~~~~~~-~d~~ri~l~G~S~GG----~~a~~~a~~~p------~~~~~~v~~sg~~ 298 (380)
T 3doh_A 234 RENPFNPEKPLLAVIKIIRKLLDEYN-IDENRIYITGLSMGG----YGTWTAIMEFP------ELFAAAIPICGGG 298 (380)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHSC-EEEEEEEEEEETHHH----HHHHHHHHHCT------TTCSEEEEESCCC
T ss_pred cccccCCcchHHHHHHHHHHHHHhcC-CCcCcEEEEEECccH----HHHHHHHHhCC------ccceEEEEecCCC
Confidence 11112234567778888888888775 444579999999999 45655544432 1478888877774
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00031 Score=63.49 Aligned_cols=64 Identities=11% Similarity=0.114 Sum_probs=48.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccccc-----C---hH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSY-----Q---PA 414 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~d-----q---P~ 414 (432)
..+||+.+|+.|.+++...++.+.+.|.=. -.+.++.++.++||....+ + .+
T Consensus 169 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~--------------------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 228 (241)
T 3f67_A 169 NAPVLGLYGAKDASIPQDTVETMRQALRAA--------------------NATAEIVVYPEADHAFNADYRASYHEESAK 228 (241)
T ss_dssp CSCEEEEEETTCTTSCHHHHHHHHHHHHHT--------------------TCSEEEEEETTCCTTTTCTTSTTCCHHHHH
T ss_pred CCCEEEEEecCCCCCCHHHHHHHHHHHHHc--------------------CCCcEEEEECCCCcceecCCCCCCCHHHHH
Confidence 589999999999999999988888887400 0257889999999987532 2 35
Q ss_pred HHHHHHHHHHcC
Q 042005 415 RALVLFSSFING 426 (432)
Q Consensus 415 ~a~~m~~~fl~~ 426 (432)
.+.+.+.+|+..
T Consensus 229 ~~~~~~~~fl~~ 240 (241)
T 3f67_A 229 DGWQRMLAWFAQ 240 (241)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 667777888753
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00014 Score=66.02 Aligned_cols=63 Identities=11% Similarity=0.112 Sum_probs=47.9
Q ss_pred Ce-EEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 344 IR-IWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 344 ir-VLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.+ ||+.+|+.|.+++....+.+.+.|+=. | .+.++.++.++||....+..+.+.+.|++
T Consensus 170 ~pp~li~~G~~D~~v~~~~~~~~~~~l~~~---------------~-----~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 229 (239)
T 3u0v_A 170 LPELFQCHGTADELVLHSWAEETNSMLKSL---------------G-----VTTKFHSFPNVYHELSKTELDILKLWILT 229 (239)
T ss_dssp CCCEEEEEETTCSSSCHHHHHHHHHHHHHT---------------T-----CCEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeeCCCCccCHHHHHHHHHHHHHc---------------C-----CcEEEEEeCCCCCcCCHHHHHHHHHHHHH
Confidence 45 999999999999998888888776400 0 25778999999999997666666666666
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
++..
T Consensus 230 ~l~~ 233 (239)
T 3u0v_A 230 KLPG 233 (239)
T ss_dssp HCC-
T ss_pred hCCC
Confidence 6643
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=0.00039 Score=66.95 Aligned_cols=60 Identities=13% Similarity=0.051 Sum_probs=46.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccc-ccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVP-SYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP-~dqP~~a~~m~~ 421 (432)
..+|||.+|..|.+||....+++.+.+. .+.++.++.++||... ....+...+.|+
T Consensus 275 ~~P~lii~G~~D~~~p~~~~~~~~~~l~-----------------------~~~~~~~~~~~gH~~~~~~~~~~~~~fl~ 331 (337)
T 1vlq_A 275 KIPALFSVGLMDNICPPSTVFAAYNYYA-----------------------GPKEIRIYPYNNHEGGGSFQAVEQVKFLK 331 (337)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHCC-----------------------SSEEEEEETTCCTTTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeeCCCCCCCchhHHHHHHhcC-----------------------CCcEEEEcCCCCCCCcchhhHHHHHHHHH
Confidence 4899999999999999999999998875 1356788999999953 344455566666
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+++.
T Consensus 332 ~~l~ 335 (337)
T 1vlq_A 332 KLFE 335 (337)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 6653
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=97.95 E-value=8.3e-05 Score=70.30 Aligned_cols=62 Identities=11% Similarity=0.083 Sum_probs=53.0
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccC-hHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQ-PARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dq-P~~a~~m~~ 421 (432)
..+|||.+|+.|.++|....+.+.+.+. ..+.+++++.+|||+++.++ |+...+.+.
T Consensus 218 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~----------------------~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~ 275 (281)
T 4fbl_A 218 KCPALIIQSREDHVVPPHNGELIYNGIG----------------------STEKELLWLENSYHVATLDNDKELILERSL 275 (281)
T ss_dssp CSCEEEEEESSCSSSCTHHHHHHHHHCC----------------------CSSEEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCcCHHHHHHHHHhCC----------------------CCCcEEEEECCCCCcCccccCHHHHHHHHH
Confidence 5799999999999999998888888864 12457789999999999985 899999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+||..
T Consensus 276 ~FL~~ 280 (281)
T 4fbl_A 276 AFIRK 280 (281)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99964
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00038 Score=59.92 Aligned_cols=57 Identities=14% Similarity=0.152 Sum_probs=48.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.++|....+.+.+.++ .++.++ ++||.. .+.++...+.+.+
T Consensus 119 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-------------------------~~~~~~-~~~H~~-~~~~~~~~~~i~~ 171 (176)
T 2qjw_A 119 AVPISIVHAWHDELIPAADVIAWAQARS-------------------------ARLLLV-DDGHRL-GAHVQAASRAFAE 171 (176)
T ss_dssp SSCEEEEEETTCSSSCHHHHHHHHHHHT-------------------------CEEEEE-SSCTTC-TTCHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHhCC-------------------------ceEEEe-CCCccc-cccHHHHHHHHHH
Confidence 4799999999999999988888887752 355677 999998 4889999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 172 fl~~ 175 (176)
T 2qjw_A 172 LLQS 175 (176)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9864
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00022 Score=65.96 Aligned_cols=57 Identities=14% Similarity=0.091 Sum_probs=48.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||.+|+.|.+++...++.+.+.+. .++.++.++||+.+.++|+.....+.+
T Consensus 204 ~~P~lii~G~~D~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~H~~~~~~~~~~~~~l~~ 258 (262)
T 2pbl_A 204 DAKVTVWVGGAERPAFLDQAIWLVEAWD-------------------------ADHVIAFEKHHFNVIEPLADPESDLVA 258 (262)
T ss_dssp SCEEEEEEETTSCHHHHHHHHHHHHHHT-------------------------CEEEEETTCCTTTTTGGGGCTTCHHHH
T ss_pred CCCEEEEEeCCCCcccHHHHHHHHHHhC-------------------------CeEEEeCCCCcchHHhhcCCCCcHHHH
Confidence 4799999999999999998888888763 367889999999999988776666666
Q ss_pred HH
Q 042005 423 FI 424 (432)
Q Consensus 423 fl 424 (432)
++
T Consensus 259 ~l 260 (262)
T 2pbl_A 259 VI 260 (262)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00015 Score=67.29 Aligned_cols=60 Identities=12% Similarity=0.046 Sum_probs=49.7
Q ss_pred CCeEEEEecCCccccCchh-HHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTC-TRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~G-t~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
..+||+.+|+.|.+++... .+.+.+..+ .+.++.++.++||+.+.++|+...+.+.
T Consensus 165 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~g~~H~~~~~~~~~~~~~i~ 221 (258)
T 2fx5_A 165 QGPMFLMSGGGDTIAFPYLNAQPVYRRAN-----------------------VPVFWGERRYVSHFEPVGSGGAYRGPST 221 (258)
T ss_dssp SSCEEEEEETTCSSSCHHHHTHHHHHHCS-----------------------SCEEEEEESSCCTTSSTTTCGGGHHHHH
T ss_pred CCCEEEEEcCCCcccCchhhHHHHHhccC-----------------------CCeEEEEECCCCCccccchHHHHHHHHH
Confidence 4799999999999999876 666665521 2457789999999999999999999998
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 222 ~fl~ 225 (258)
T 2fx5_A 222 AWFR 225 (258)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8885
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00013 Score=70.70 Aligned_cols=63 Identities=19% Similarity=0.239 Sum_probs=45.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh---HHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP---ARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP---~~a~~m 419 (432)
..+|||.+|+.|.+++. .+.+.+.|.= .| .+..++++.++||.....+| +...+.
T Consensus 265 ~~P~Lvi~G~~D~~~~~--~~~~~~~l~~---------------~~-----~~~~~~~~~g~gH~~~~~~~~~~~~~~~~ 322 (338)
T 2o7r_A 265 GWRVMVVGCHGDPMIDR--QMELAERLEK---------------KG-----VDVVAQFDVGGYHAVKLEDPEKAKQFFVI 322 (338)
T ss_dssp TCEEEEEEETTSTTHHH--HHHHHHHHHH---------------TT-----CEEEEEEESSCCTTGGGTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCcchHH--HHHHHHHHHH---------------CC-----CcEEEEEECCCceEEeccChHHHHHHHHH
Confidence 35999999999999873 3444554420 00 14678899999999988888 788888
Q ss_pred HHHHHcCC
Q 042005 420 FSSFINGT 427 (432)
Q Consensus 420 ~~~fl~~~ 427 (432)
+.+|+...
T Consensus 323 i~~Fl~~~ 330 (338)
T 2o7r_A 323 LKKFVVDS 330 (338)
T ss_dssp HHHHHC--
T ss_pred HHHHHHhh
Confidence 99999653
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=97.94 E-value=2.5e-05 Score=72.92 Aligned_cols=64 Identities=11% Similarity=0.092 Sum_probs=50.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh---------
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP--------- 413 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP--------- 413 (432)
..+|||.+|+.|.++|...++.+.+.|.=.+ ...++.++.++||......+
T Consensus 188 ~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~--------------------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 247 (276)
T 3hxk_A 188 TPPTFIWHTADDEGVPIYNSLKYCDRLSKHQ--------------------VPFEAHFFESGPHGVSLANRTTAPSDAYC 247 (276)
T ss_dssp SCCEEEEEETTCSSSCTHHHHHHHHHHHTTT--------------------CCEEEEEESCCCTTCTTCSTTSCSSSTTC
T ss_pred CCCEEEEecCCCceeChHHHHHHHHHHHHcC--------------------CCeEEEEECCCCCCccccCcccccccccc
Confidence 4799999999999999999998888874111 24678999999998876665
Q ss_pred ----HHHHHHHHHHHcC
Q 042005 414 ----ARALVLFSSFING 426 (432)
Q Consensus 414 ----~~a~~m~~~fl~~ 426 (432)
+..++.+.+|++.
T Consensus 248 ~~~~~~~~~~~~~wl~~ 264 (276)
T 3hxk_A 248 LPSVHRWVSWASDWLER 264 (276)
T ss_dssp CHHHHTHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHh
Confidence 5677788888754
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=0.0017 Score=61.06 Aligned_cols=55 Identities=15% Similarity=0.202 Sum_probs=45.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||..|+.|.++|....+...+.+. +.+++++.++|| ++|+...+.+.+
T Consensus 237 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~p------------------------~~~~~~i~~~gH----e~p~~~~~~i~~ 288 (298)
T 1q0r_A 237 TVPTLVIQAEHDPIAPAPHGKHLAGLIP------------------------TARLAEIPGMGH----ALPSSVHGPLAE 288 (298)
T ss_dssp CSCEEEEEETTCSSSCTTHHHHHHHTST------------------------TEEEEEETTCCS----SCCGGGHHHHHH
T ss_pred CCCEEEEEeCCCccCCHHHHHHHHHhCC------------------------CCEEEEcCCCCC----CCcHHHHHHHHH
Confidence 5899999999999999877776666543 567899999999 677778888888
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 289 fl~ 291 (298)
T 1q0r_A 289 VIL 291 (298)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=97.92 E-value=2e-05 Score=84.05 Aligned_cols=228 Identities=13% Similarity=0.113 Sum_probs=126.4
Q ss_pred eEEEEEEEcCC--CCCCCCeEEEEcCCCChhh--------hhHhhhhhcCCeEEcCCCCeeecCCCCCCC-CCcccCChh
Q 042005 103 SLFYYFVESPQ--NSSSKPLVLWLNGGPGFSS--------FGAGTMMELGPFRVNKDGKTLYQNEYAWNK-DYKVNGDIR 171 (432)
Q Consensus 103 ~lFywf~es~~--~p~~~PlilWlnGGPGcSS--------l~~G~f~E~GP~~~~~~~~~l~~N~~SW~~-~~~~~~~~~ 171 (432)
.+.+|++...+ .....|+||++.|||+... ...-+|.+.|=-.+..|....-.....|.+ .+.. -...
T Consensus 479 ~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~-~~~~ 557 (723)
T 1xfd_A 479 NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRR-LGLL 557 (723)
T ss_dssp EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTC-TTTH
T ss_pred eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhc-cCcc
Confidence 67777775443 2355799999999998742 101235556644444432100000000000 0110 1123
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHH
Q 042005 172 TARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFY 251 (432)
Q Consensus 172 ~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~ 251 (432)
..+|+..++.. +...+.....+++|+|+|+|| .+|..+..+... ...-.++++++.+|..+.....
T Consensus 558 ~~~d~~~~~~~-l~~~~~~d~~~i~l~G~S~GG----~~a~~~a~~~~~--~~p~~~~~~v~~~~~~~~~~~~------- 623 (723)
T 1xfd_A 558 EEKDQMEAVRT-MLKEQYIDRTRVAVFGKDYGG----YLSTYILPAKGE--NQGQTFTCGSALSPITDFKLYA------- 623 (723)
T ss_dssp HHHHHHHHHHH-HHSSSSEEEEEEEEEEETHHH----HHHHHCCCCSSS--TTCCCCSEEEEESCCCCTTSSB-------
T ss_pred cHHHHHHHHHH-HHhCCCcChhhEEEEEECHHH----HHHHHHHHhccc--cCCCeEEEEEEccCCcchHHhh-------
Confidence 45666666554 445554445679999999999 566555443200 0023588999988877643110
Q ss_pred HhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCCCC
Q 042005 252 WTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKPQT 331 (432)
Q Consensus 252 ~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~~~ 331 (432)
..+ .+.. .+. +... .. .|.. .+
T Consensus 624 --------~~~----------------------~~~~---~~~--~~~~-~~--------------------~~~~--~~ 645 (723)
T 1xfd_A 624 --------SAF----------------------SERY---LGL--HGLD-NR--------------------AYEM--TK 645 (723)
T ss_dssp --------HHH----------------------HHHH---HCC--CSSC-CS--------------------STTT--TC
T ss_pred --------hhc----------------------cHhh---cCC--ccCC-hh--------------------HHHh--cC
Confidence 000 0000 010 0000 00 0000 01
Q ss_pred cHHHHHHHHHcC-CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccc-c
Q 042005 332 VLPIIQELMAEG-IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFV-P 409 (432)
Q Consensus 332 ~~~~l~~LL~~g-irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmv-P 409 (432)
.... +-+-. .++||.+|+.|.+||...++++.+.|.=. | .+..++++.++||+. .
T Consensus 646 ~~~~---~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~---------------~-----~~~~~~~~~~~~H~~~~ 702 (723)
T 1xfd_A 646 VAHR---VSALEEQQFLIIHPTADEKIHFQHTAELITQLIRG---------------K-----ANYSLQIYPDESHYFTS 702 (723)
T ss_dssp THHH---HTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHT---------------T-----CCCEEEEETTCCSSCCC
T ss_pred hhhH---HhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHC---------------C-----CCeEEEEECCCCccccc
Confidence 1111 11223 69999999999999999998888876400 0 246789999999998 6
Q ss_pred ccChHHHHHHHHHHHcC
Q 042005 410 SYQPARALVLFSSFING 426 (432)
Q Consensus 410 ~dqP~~a~~m~~~fl~~ 426 (432)
.++|+...+.+.+|+..
T Consensus 703 ~~~~~~~~~~i~~fl~~ 719 (723)
T 1xfd_A 703 SSLKQHLYRSIINFFVE 719 (723)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred CcchHHHHHHHHHHHHH
Confidence 67889999999999964
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00054 Score=66.82 Aligned_cols=60 Identities=15% Similarity=0.059 Sum_probs=46.9
Q ss_pred eEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc----cChHHHHHHH
Q 042005 345 RIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS----YQPARALVLF 420 (432)
Q Consensus 345 rVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~----dqP~~a~~m~ 420 (432)
+|||.+|+.|.+++ ..+.+.+.|.-. | .+.++.++.++||.... ++++...+.+
T Consensus 287 P~Lii~G~~D~~~~--~~~~~~~~l~~~---------------g-----~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i 344 (351)
T 2zsh_A 287 KSLVVVAGLDLIRD--WQLAYAEGLKKA---------------G-----QEVKLMHLEKATVGFYLLPNNNHFHNVMDEI 344 (351)
T ss_dssp EEEEEEETTSTTHH--HHHHHHHHHHHT---------------T-----CCEEEEEETTCCTTTTSSSCSHHHHHHHHHH
T ss_pred CEEEEEcCCCcchH--HHHHHHHHHHHc---------------C-----CCEEEEEECCCcEEEEecCCCHHHHHHHHHH
Confidence 99999999999887 345555555300 1 25688999999999887 7899999999
Q ss_pred HHHHcC
Q 042005 421 SSFING 426 (432)
Q Consensus 421 ~~fl~~ 426 (432)
.+|+..
T Consensus 345 ~~Fl~~ 350 (351)
T 2zsh_A 345 SAFVNA 350 (351)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 999964
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00027 Score=70.66 Aligned_cols=63 Identities=8% Similarity=0.035 Sum_probs=51.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEE---cCCcccccccChHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTV---RGAGHFVPSYQPARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V---~~AGHmvP~dqP~~a~~m 419 (432)
..+|||.+|..|.+++...++.+.+.+.=.+ ...++.++ .++||..+.++|+...+.
T Consensus 333 ~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~--------------------~~~~l~~~~~~~h~gh~~~~~~~~~~~~~ 392 (405)
T 3fnb_A 333 DVPSLFLVGAGEDSELMRQSQVLYDNFKQRG--------------------IDVTLRKFSSESGADAHCQVNNFRLMHYQ 392 (405)
T ss_dssp CSCEEEEEETTSCHHHHHHHHHHHHHHHHTT--------------------CCEEEEEECTTTTCCSGGGGGGHHHHHHH
T ss_pred CCCEEEEecCCCcCCChHHHHHHHHHhccCC--------------------CCceEEEEcCCccchhccccchHHHHHHH
Confidence 5899999999999999998888888873000 13566777 778899999999999999
Q ss_pred HHHHHc
Q 042005 420 FSSFIN 425 (432)
Q Consensus 420 ~~~fl~ 425 (432)
+.+|+.
T Consensus 393 i~~fL~ 398 (405)
T 3fnb_A 393 VFEWLN 398 (405)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00017 Score=70.92 Aligned_cols=129 Identities=12% Similarity=0.087 Sum_probs=67.7
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCC---Chhh--hh---HhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChh
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGP---GFSS--FG---AGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIR 171 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGP---GcSS--l~---~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~ 171 (432)
++..+..+.+.........|+|||+.||. |.+. .. .-.|.+.|=..+..|-. ..- .| ...........
T Consensus 91 ~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r-~~g--g~-~~~~~~~~~~~ 166 (361)
T 1jkm_A 91 DGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFR-NAW--TA-EGHHPFPSGVE 166 (361)
T ss_dssp TSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECC-CSE--ET-TEECCTTHHHH
T ss_pred CCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecC-CCC--CC-CCCCCCCccHH
Confidence 34467777664443333679999999998 6665 31 12334445333322210 000 00 00000001112
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 172 TARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 172 ~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
...+.++++++..+.| ...++.|+|+|+||..+-.+|....+.. ..-.++++++.+|+++.
T Consensus 167 D~~~~~~~v~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~~-----~p~~i~~~il~~~~~~~ 227 (361)
T 1jkm_A 167 DCLAAVLWVDEHRESL---GLSGVVVQGESGGGNLAIATTLLAKRRG-----RLDAIDGVYASIPYISG 227 (361)
T ss_dssp HHHHHHHHHHHTHHHH---TEEEEEEEEETHHHHHHHHHHHHHHHTT-----CGGGCSEEEEESCCCCC
T ss_pred HHHHHHHHHHhhHHhc---CCCeEEEEEECHHHHHHHHHHHHHHhcC-----CCcCcceEEEECCcccc
Confidence 2233344455444444 2228999999999976666555443321 12268999999999886
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00014 Score=65.62 Aligned_cols=63 Identities=17% Similarity=0.097 Sum_probs=50.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh--------H
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP--------A 414 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP--------~ 414 (432)
..+||+.+|..|.+++....+.+.+.+. ..++.++..+.++||....+.| +
T Consensus 160 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 218 (236)
T 1zi8_A 160 KHPALFHMGGQDHFVPAPSRQLITEGFG---------------------ANPLLQVHWYEEAGHSFARTGSSGYVASAAA 218 (236)
T ss_dssp CSCEEEEEETTCTTSCHHHHHHHHHHHT---------------------TCTTEEEEEETTCCTTTTCTTSTTCCHHHHH
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHH---------------------hCCCceEEEECCCCcccccCCCCccCHHHHH
Confidence 4799999999999999998888888874 0125678899999998887765 4
Q ss_pred HHHHHHHHHHcC
Q 042005 415 RALVLFSSFING 426 (432)
Q Consensus 415 ~a~~m~~~fl~~ 426 (432)
.+.+.+.+|+..
T Consensus 219 ~~~~~i~~fl~~ 230 (236)
T 1zi8_A 219 LANERTLDFLVP 230 (236)
T ss_dssp HHHHHHHHHHGG
T ss_pred HHHHHHHHHHHH
Confidence 567777788753
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00017 Score=67.23 Aligned_cols=66 Identities=12% Similarity=0.014 Sum_probs=44.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccC----------
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQ---------- 412 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dq---------- 412 (432)
..+|||.+|+.|.++|...++.+.+.|.= + -...++.++.++||......
T Consensus 191 ~~P~lii~G~~D~~vp~~~~~~~~~~l~~---------------~-----~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 250 (277)
T 3bxp_A 191 SKPAFVWQTATDESVPPINSLKYVQAMLQ---------------H-----QVATAYHLFGSGIHGLALANHVTQKPGKDK 250 (277)
T ss_dssp SCCEEEEECTTCCCSCTHHHHHHHHHHHH---------------T-----TCCEEEEECCCC----------------CH
T ss_pred CCCEEEEeeCCCCccChHHHHHHHHHHHH---------------C-----CCeEEEEEeCCCCcccccccccccCccccc
Confidence 36999999999999999888888877640 0 02467889999999665554
Q ss_pred -----hHHHHHHHHHHHcCCC
Q 042005 413 -----PARALVLFSSFINGTL 428 (432)
Q Consensus 413 -----P~~a~~m~~~fl~~~~ 428 (432)
++...+.+.+|+....
T Consensus 251 ~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 251 YLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT
T ss_pred cccchHHHHHHHHHHHHHhcc
Confidence 4667888888886544
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00033 Score=67.88 Aligned_cols=129 Identities=13% Similarity=0.062 Sum_probs=71.3
Q ss_pred EEecCCCCceEEEEEEEcCCC-CCCCCeEEEEcCCCChhhhh----HhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccC
Q 042005 94 VNVDSQDGRSLFYYFVESPQN-SSSKPLVLWLNGGPGFSSFG----AGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNG 168 (432)
Q Consensus 94 l~v~~~~~~~lFywf~es~~~-p~~~PlilWlnGGPGcSSl~----~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~ 168 (432)
+.+....+..+.++.+...+. +...|+||++.|++|..... .-.|.+.|=-.+-.|-... ..|........+
T Consensus 71 ~~~~~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~---g~s~~~~~~~~~ 147 (367)
T 2hdw_A 71 VTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYT---GESGGQPRNVAS 147 (367)
T ss_dssp EEEECTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTS---TTSCCSSSSCCC
T ss_pred EEEecCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCc---CCCCCcCccccc
Confidence 444433456788776644333 45679999999999866531 1335556633333221100 001000000011
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 169 DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 169 ~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
.....+|+..++. ++...+.....+++|+|+|+||.. |..+.... + .++++++.+|+
T Consensus 148 ~~~~~~d~~~~~~-~l~~~~~~~~~~~~l~G~S~Gg~~----a~~~a~~~-----p--~~~~~v~~~p~ 204 (367)
T 2hdw_A 148 PDINTEDFSAAVD-FISLLPEVNRERIGVIGICGWGGM----ALNAVAVD-----K--RVKAVVTSTMY 204 (367)
T ss_dssp HHHHHHHHHHHHH-HHHHCTTEEEEEEEEEEETHHHHH----HHHHHHHC-----T--TCCEEEEESCC
T ss_pred hhhHHHHHHHHHH-HHHhCcCCCcCcEEEEEECHHHHH----HHHHHhcC-----C--CccEEEEeccc
Confidence 2345566655554 455565555568999999999954 44444332 1 58999988876
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=97.09 E-value=1.9e-06 Score=80.62 Aligned_cols=60 Identities=17% Similarity=0.274 Sum_probs=44.6
Q ss_pred CCeEEEEecCCcc-ccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDG-ALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~-i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
.++||+.+|+.|. +++....+.+.+. ..+.++.++ ++||+++.++|+...+.+.
T Consensus 232 ~~P~lii~G~~D~~~~~~~~~~~~~~~------------------------~~~~~~~~i-~~gH~~~~e~p~~~~~~i~ 286 (304)
T 3b12_A 232 QCPALVFSGSAGLMHSLFEMQVVWAPR------------------------LANMRFASL-PGGHFFVDRFPDDTARILR 286 (304)
Confidence 5899999999995 4444322222211 134567788 9999999999999999999
Q ss_pred HHHcCC
Q 042005 422 SFINGT 427 (432)
Q Consensus 422 ~fl~~~ 427 (432)
+|+...
T Consensus 287 ~fl~~~ 292 (304)
T 3b12_A 287 EFLSDA 292 (304)
Confidence 999764
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=97.83 E-value=2.8e-05 Score=73.04 Aligned_cols=64 Identities=16% Similarity=0.151 Sum_probs=50.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh---------
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP--------- 413 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP--------- 413 (432)
..+|||.+|+.|.++|....+.+.+.|.=. | ...++.++.++||....+.|
T Consensus 205 ~~P~lii~G~~D~~~p~~~~~~~~~~l~~~---------------g-----~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 264 (283)
T 3bjr_A 205 NQPTFIWTTADDPIVPATNTLAYATALATA---------------K-----IPYELHVFKHGPHGLALANAQTAWKPDAN 264 (283)
T ss_dssp CCCEEEEEESCCTTSCTHHHHHHHHHHHHT---------------T-----CCEEEEEECCCSHHHHHHHHHHSCC----
T ss_pred CCCEEEEEcCCCCCCChHHHHHHHHHHHHC---------------C-----CCeEEEEeCCCCccccccccccccccccc
Confidence 479999999999999998888888876400 0 13678899999998777665
Q ss_pred ----HHHHHHHHHHHcC
Q 042005 414 ----ARALVLFSSFING 426 (432)
Q Consensus 414 ----~~a~~m~~~fl~~ 426 (432)
+...+.+.+|+..
T Consensus 265 ~~~~~~~~~~i~~fl~~ 281 (283)
T 3bjr_A 265 QPHVAHWLTLALEWLAD 281 (283)
T ss_dssp ---CCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhh
Confidence 6677888888854
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=97.80 E-value=0.0004 Score=62.06 Aligned_cols=121 Identities=12% Similarity=0.054 Sum_probs=64.1
Q ss_pred eEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhh-hc--CCeEEcCCCCeeecCCCCCCC-----C--Cccc---CC
Q 042005 103 SLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMM-EL--GPFRVNKDGKTLYQNEYAWNK-----D--YKVN---GD 169 (432)
Q Consensus 103 ~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~-E~--GP~~~~~~~~~l~~N~~SW~~-----~--~~~~---~~ 169 (432)
.+.|.+.+. .....| ||+|-|..|.+.. +.-+. .. |=-.+..+.+......++|.. . .... +-
T Consensus 4 ~~~~~~~~~--~~~~~p-vv~lHG~g~~~~~-~~~~~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~ 79 (209)
T 3og9_A 4 MTDYVFKAG--RKDLAP-LLLLHSTGGDEHQ-LVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESL 79 (209)
T ss_dssp CCCEEEECC--CTTSCC-EEEECCTTCCTTT-THHHHHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHH
T ss_pred cceEEEeCC--CCCCCC-EEEEeCCCCCHHH-HHHHHHhcCCCceEEEecCCcCCCCcccceecccccccccCCCCHHHH
Confidence 344555544 235679 9999998877664 23222 22 211122222212223466654 1 1011 11
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
...++++.+++....+.+ .....+++|+|.|+|| .+|..+..+.. -.++++++.+|.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~-~~d~~~~~l~G~S~Gg----~~a~~~a~~~~------~~~~~~v~~~~~~ 137 (209)
T 3og9_A 80 DEETDWLTDEVSLLAEKH-DLDVHKMIAIGYSNGA----NVALNMFLRGK------INFDKIIAFHGMQ 137 (209)
T ss_dssp HHHHHHHHHHHHHHHHHH-TCCGGGCEEEEETHHH----HHHHHHHHTTS------CCCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHhc-CCCcceEEEEEECHHH----HHHHHHHHhCC------cccceEEEECCCC
Confidence 234455556665555544 3344689999999999 55555544432 2478888777654
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00029 Score=66.47 Aligned_cols=83 Identities=10% Similarity=0.053 Sum_probs=49.8
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccc--eeeeecCeeeeEE--EEecceEEEEEcCCcccccccChHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAW--YPWYTQGEVGGYA--VGYQNLTFVTVRGAGHFVPSYQPARA 416 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~--~~w~~~~~~~G~~--k~~~nLTf~~V~~AGHmvP~dqP~~a 416 (432)
+-. +||+.+|+.|.++|....+.+.+.+.-....+- +..+.... .|.. ...++.+++++.+|||+++.++|+..
T Consensus 216 ~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~ 293 (302)
T 1pja_A 216 RVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDS-FGLKTLLARGAIVRCPMAGISHTAWHSNRTLY 293 (302)
T ss_dssp TCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHHHTTT-TSHHHHHHTTCEEEEECSSCCTTTTTSCHHHH
T ss_pred ccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhhhhhh-hchhhHhhcCCeEEEEecCccccccccCHHHH
Confidence 345 999999999999998655443222110000000 00000000 0000 00123788999999999999999999
Q ss_pred HHHHHHHHc
Q 042005 417 LVLFSSFIN 425 (432)
Q Consensus 417 ~~m~~~fl~ 425 (432)
.+.+.+|+.
T Consensus 294 ~~~i~~fl~ 302 (302)
T 1pja_A 294 ETCIEPWLS 302 (302)
T ss_dssp HHHTGGGCC
T ss_pred HHHHHHhcC
Confidence 999998873
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00099 Score=57.97 Aligned_cols=56 Identities=18% Similarity=0.140 Sum_probs=45.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.+++|+.+|+.|.++|.... . ..+.++.++.++||+...++| ...+.+.+
T Consensus 122 ~~p~l~i~G~~D~~v~~~~~-----~------------------------~~~~~~~~~~~~gH~~~~~~~-~~~~~i~~ 171 (181)
T 1isp_A 122 KILYTSIYSSADMIVMNYLS-----R------------------------LDGARNVQIHGVGHIGLLYSS-QVNSLIKE 171 (181)
T ss_dssp CCEEEEEEETTCSSSCHHHH-----C------------------------CBTSEEEEESSCCTGGGGGCH-HHHHHHHH
T ss_pred CCcEEEEecCCCcccccccc-----c------------------------CCCCcceeeccCchHhhccCH-HHHHHHHH
Confidence 47999999999999998521 0 134567899999999999998 68899999
Q ss_pred HHcCCC
Q 042005 423 FINGTL 428 (432)
Q Consensus 423 fl~~~~ 428 (432)
|+....
T Consensus 172 fl~~~~ 177 (181)
T 1isp_A 172 GLNGGG 177 (181)
T ss_dssp HHTTTC
T ss_pred HHhccC
Confidence 997654
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00095 Score=72.02 Aligned_cols=135 Identities=16% Similarity=0.116 Sum_probs=78.6
Q ss_pred ecCCCCceEEEEEEEcCCC--CCCCCeEEEEcCCCChhhhh-----Hh-hhhhcCCeEEcCCCCeeecCCCCCCCCCccc
Q 042005 96 VDSQDGRSLFYYFVESPQN--SSSKPLVLWLNGGPGFSSFG-----AG-TMMELGPFRVNKDGKTLYQNEYAWNKDYKVN 167 (432)
Q Consensus 96 v~~~~~~~lFywf~es~~~--p~~~PlilWlnGGPGcSSl~-----~G-~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~ 167 (432)
+....+..+..|++...+. ....|+||++-||||.+... .. .|.+.|=..+..+-..-..-...|.+.-...
T Consensus 454 ~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~ 533 (711)
T 4hvt_A 454 ATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGI 533 (711)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGG
T ss_pred EECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhc
Confidence 3333467788887765432 35789999999998765421 22 5667775544322110000011232211111
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
.-....+|+...++. +...+......+.|.|.|||| ++|..+..+.. -.+++++...|++|..
T Consensus 534 ~~~~~~~D~~aav~~-L~~~~~~d~~rI~i~G~S~GG----~la~~~a~~~p------d~f~a~V~~~pv~D~~ 596 (711)
T 4hvt_A 534 KRQTAFNDFFAVSEE-LIKQNITSPEYLGIKGGSNGG----LLVSVAMTQRP------ELFGAVACEVPILDMI 596 (711)
T ss_dssp GTHHHHHHHHHHHHH-HHHTTSCCGGGEEEEEETHHH----HHHHHHHHHCG------GGCSEEEEESCCCCTT
T ss_pred cCcCcHHHHHHHHHH-HHHcCCCCcccEEEEeECHHH----HHHHHHHHhCc------CceEEEEEeCCccchh
Confidence 223455666665554 444444455689999999999 56666665532 1478999999998864
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00076 Score=65.07 Aligned_cols=62 Identities=13% Similarity=0.136 Sum_probs=46.1
Q ss_pred CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc---cChHHHHHHH
Q 042005 344 IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS---YQPARALVLF 420 (432)
Q Consensus 344 irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~---dqP~~a~~m~ 420 (432)
.+|||.+|+.|..+ ...+.+.+.+.= . ..+.++.++.++||+.+. .+|+.+.+.+
T Consensus 257 ~P~lii~G~~D~~~--~~~~~~~~~l~~---------------~-----~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i 314 (326)
T 3d7r_A 257 PPVYMFGGGREMTH--PDMKLFEQMMLQ---------------H-----HQYIEFYDYPKMVHDFPIYPIRQSHKAIKQI 314 (326)
T ss_dssp CCEEEEEETTSTTH--HHHHHHHHHHHH---------------T-----TCCEEEEEETTCCTTGGGSSSHHHHHHHHHH
T ss_pred CCEEEEEeCcccch--HHHHHHHHHHHH---------------C-----CCcEEEEEeCCCcccccccCCHHHHHHHHHH
Confidence 48999999999643 344555555420 0 025688999999999887 8899999999
Q ss_pred HHHHcCC
Q 042005 421 SSFINGT 427 (432)
Q Consensus 421 ~~fl~~~ 427 (432)
.+|+...
T Consensus 315 ~~fl~~~ 321 (326)
T 3d7r_A 315 AKSIDED 321 (326)
T ss_dssp HHHHTSC
T ss_pred HHHHHHH
Confidence 9999653
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.0011 Score=72.00 Aligned_cols=136 Identities=16% Similarity=0.074 Sum_probs=77.3
Q ss_pred EEecCCCCceEEEEEEEcCC-C-CCCCCeEEEEcCCCChhh------hhHhhhhhcCCeEEcCCCCeeecCCCCCCC-CC
Q 042005 94 VNVDSQDGRSLFYYFVESPQ-N-SSSKPLVLWLNGGPGFSS------FGAGTMMELGPFRVNKDGKTLYQNEYAWNK-DY 164 (432)
Q Consensus 94 l~v~~~~~~~lFywf~es~~-~-p~~~PlilWlnGGPGcSS------l~~G~f~E~GP~~~~~~~~~l~~N~~SW~~-~~ 164 (432)
+.+....+..+..|++...+ + ....|+||++-||||.+. . .-.|.+.|=..+..+-..-......|.+ .-
T Consensus 483 ~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~-~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~ 561 (751)
T 2xe4_A 483 RFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQ-HLPYCDRGMIFAIAHIRGGSELGRAWYEIGA 561 (751)
T ss_dssp EEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGG-GHHHHTTTCEEEEECCTTSCTTCTHHHHTTS
T ss_pred EEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHH-HHHHHhCCcEEEEEeeCCCCCcCcchhhccc
Confidence 44443346678777664433 2 356799999999998764 2 2345566643332221100001122322 11
Q ss_pred cccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 165 KVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 165 ~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
.........+|+...++...+ .+.....++.|.|.|||| .+|..+..+.. -.++++++..|++|..
T Consensus 562 ~~~~~~~~~~D~~~~~~~l~~-~~~~d~~ri~i~G~S~GG----~la~~~a~~~p------~~~~a~v~~~~~~d~~ 627 (751)
T 2xe4_A 562 KYLTKRNTFSDFIAAAEFLVN-AKLTTPSQLACEGRSAGG----LLMGAVLNMRP------DLFKVALAGVPFVDVM 627 (751)
T ss_dssp SGGGTHHHHHHHHHHHHHHHH-TTSCCGGGEEEEEETHHH----HHHHHHHHHCG------GGCSEEEEESCCCCHH
T ss_pred cccccCccHHHHHHHHHHHHH-CCCCCcccEEEEEECHHH----HHHHHHHHhCc------hheeEEEEeCCcchHH
Confidence 001122456677776654444 444445689999999999 56666665532 1478999999988754
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0021 Score=59.50 Aligned_cols=53 Identities=25% Similarity=0.370 Sum_probs=41.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+..|+.|.+++ ...+.+. ..++++.+|||+++.++|+...+.+.+
T Consensus 208 ~~P~lii~G~~D~~~~-----~~~~~~~-------------------------~~~~~i~~~gH~~~~e~p~~~~~~i~~ 257 (264)
T 1r3d_A 208 KLPIHYVCGEQDSKFQ-----QLAESSG-------------------------LSYSQVAQAGHNVHHEQPQAFAKIVQA 257 (264)
T ss_dssp SSCEEEEEETTCHHHH-----HHHHHHC-------------------------SEEEEETTCCSCHHHHCHHHHHHHHHH
T ss_pred CCCEEEEEECCCchHH-----HHHHHhC-------------------------CcEEEcCCCCCchhhcCHHHHHHHHHH
Confidence 5899999999997542 1222211 347889999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 258 fl~ 260 (264)
T 1r3d_A 258 MIH 260 (264)
T ss_dssp HHH
T ss_pred HHH
Confidence 985
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00033 Score=75.18 Aligned_cols=132 Identities=17% Similarity=0.109 Sum_probs=76.0
Q ss_pred CCCceEEEEEEEcCC--CCCCCCeEEEEcCCCChhhhh-----HhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChh
Q 042005 99 QDGRSLFYYFVESPQ--NSSSKPLVLWLNGGPGFSSFG-----AGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIR 171 (432)
Q Consensus 99 ~~~~~lFywf~es~~--~p~~~PlilWlnGGPGcSSl~-----~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~ 171 (432)
..+..+..|++..+. .....|+||++-||||.+... .-.|.+.|=..+..+-..-......|.+.-....-..
T Consensus 433 ~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~ 512 (693)
T 3iuj_A 433 KDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQN 512 (693)
T ss_dssp TTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHH
T ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCC
Confidence 345677777775443 235689999999999865431 1355566644433221100001112333111112223
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 172 TARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 172 ~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
..+|+..+++... ..+.....++.|.|.|+|| .+|..+..+.. -.+++++...|++|..
T Consensus 513 ~~~D~~~~~~~l~-~~~~~d~~ri~i~G~S~GG----~la~~~~~~~p------~~~~a~v~~~~~~d~~ 571 (693)
T 3iuj_A 513 VFDDFIAAAEYLK-AEGYTRTDRLAIRGGSNGG----LLVGAVMTQRP------DLMRVALPAVGVLDML 571 (693)
T ss_dssp HHHHHHHHHHHHH-HTTSCCGGGEEEEEETHHH----HHHHHHHHHCT------TSCSEEEEESCCCCTT
T ss_pred cHHHHHHHHHHHH-HcCCCCcceEEEEEECHHH----HHHHHHHhhCc------cceeEEEecCCcchhh
Confidence 4567766655444 4444455689999999999 56666655532 1478999999998864
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0027 Score=61.17 Aligned_cols=55 Identities=13% Similarity=0.141 Sum_probs=43.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh---HHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP---ARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP---~~a~~m 419 (432)
..+|||.+|+.|.++|.. .+.+. .+.+++++.+|||+++.++| +...+.
T Consensus 294 ~~P~Lii~G~~D~~~p~~-----~~~l~-----------------------~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 345 (354)
T 2rau_A 294 LVPTIAFVSERFGIQIFD-----SKILP-----------------------SNSEIILLKGYGHLDVYTGENSEKDVNSV 345 (354)
T ss_dssp CCCEEEEEETTTHHHHBC-----GGGSC-----------------------TTCEEEEETTCCGGGGTSSTTHHHHTHHH
T ss_pred CCCEEEEecCCCCCCccc-----hhhhc-----------------------cCceEEEcCCCCCchhhcCCCcHHHHHHH
Confidence 589999999999987732 11211 24588999999999988776 888999
Q ss_pred HHHHHc
Q 042005 420 FSSFIN 425 (432)
Q Consensus 420 ~~~fl~ 425 (432)
+.+|+.
T Consensus 346 i~~fl~ 351 (354)
T 2rau_A 346 VLKWLS 351 (354)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=97.56 E-value=6.2e-05 Score=71.75 Aligned_cols=63 Identities=21% Similarity=0.244 Sum_probs=50.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||.+|+.|.+++...++++.+.|. -+| .+.++.++.++||+...+++......+.+
T Consensus 236 ~~P~lii~G~~D~~v~~~~~~~~~~~l~---------------~~g-----~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 295 (303)
T 4e15_A 236 STKIYVVAAEHDSTTFIEQSRHYADVLR---------------KKG-----YKASFTLFKGYDHFDIIEETAIDDSDVSR 295 (303)
T ss_dssp TSEEEEEEEEESCHHHHHHHHHHHHHHH---------------HHT-----CCEEEEEEEEEETTHHHHGGGSTTSHHHH
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHHHH---------------HCC-----CceEEEEeCCCCchHHHHHHhCCCcHHHH
Confidence 5899999999999999999999888774 011 24678999999999998888777666776
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
++.
T Consensus 296 ~l~ 298 (303)
T 4e15_A 296 FLR 298 (303)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00052 Score=64.11 Aligned_cols=58 Identities=10% Similarity=0.009 Sum_probs=44.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc--cChHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS--YQPARALVLF 420 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~--dqP~~a~~m~ 420 (432)
..+||+.+|+.|.+++....+.|.+.+. +..++..+. +||+.+. ++|++..+.|
T Consensus 221 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~-ggH~~~~~~~~~~~~~~~i 276 (280)
T 3qmv_A 221 DCPTTAFSAAADPIATPEMVEAWRPYTT-----------------------GSFLRRHLP-GNHFFLNGGPSRDRLLAHL 276 (280)
T ss_dssp CSCEEEEEEEECSSSCHHHHHTTGGGBS-----------------------SCEEEEEEE-EETTGGGSSHHHHHHHHHH
T ss_pred ecCeEEEEecCCCCcChHHHHHHHHhcC-----------------------CceEEEEec-CCCeEEcCchhHHHHHHHH
Confidence 4799999999999999866665555432 224455555 6999999 8999999999
Q ss_pred HHHH
Q 042005 421 SSFI 424 (432)
Q Consensus 421 ~~fl 424 (432)
.+||
T Consensus 277 ~~~L 280 (280)
T 3qmv_A 277 GTEL 280 (280)
T ss_dssp HTTC
T ss_pred HhhC
Confidence 8875
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0031 Score=60.98 Aligned_cols=66 Identities=17% Similarity=0.249 Sum_probs=51.6
Q ss_pred CCeEEEEecCCccccCc-----hhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCc-----ccccccC
Q 042005 343 GIRIWVYSGDTDGALPV-----TCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAG-----HFVPSYQ 412 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~-----~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AG-----HmvP~dq 412 (432)
.++|||++|+.|.+++. ...+.+.+.++= +| .+.+++.+.++| |++..++
T Consensus 245 ~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~---------------~g-----~~~~~~~~~~~gi~G~~H~~~~~~ 304 (328)
T 1qlw_A 245 SIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNA---------------AG-----GKGQLMSLPALGVHGNSHMMMQDR 304 (328)
T ss_dssp TSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHH---------------TT-----CCEEEEEGGGGTCCCCCTTGGGST
T ss_pred CCCEEEEeccCCccccchhhHHHHHHHHHHHHHH---------------hC-----CCceEEEcCCCCcCCCcccchhcc
Confidence 48999999999999995 777777777630 00 145677788555 9999999
Q ss_pred -hHHHHHHHHHHHcCCC
Q 042005 413 -PARALVLFSSFINGTL 428 (432)
Q Consensus 413 -P~~a~~m~~~fl~~~~ 428 (432)
|+...+.+.+|+....
T Consensus 305 ~~~~~~~~i~~fl~~~~ 321 (328)
T 1qlw_A 305 NNLQVADLILDWIGRNT 321 (328)
T ss_dssp THHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhcc
Confidence 9999999999997543
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.016 Score=57.67 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=67.9
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhh----hhhc---C-----CeEEcCCCCeeecCCCCCCCCCc--c
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGT----MMEL---G-----PFRVNKDGKTLYQNEYAWNKDYK--V 166 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~----f~E~---G-----P~~~~~~~~~l~~N~~SW~~~~~--~ 166 (432)
+..++|....+.. .+.|.||.+.|.||++.. +.- |.+. | -|++- .+...-+..+.... .
T Consensus 77 g~~i~~~~~~~~~--~~~~plll~HG~~~s~~~-~~~~~~~L~~~~~~~~~~~~~~~vi----~~dl~G~G~S~~~~~~~ 149 (388)
T 4i19_A 77 GATIHFLHVRSPE--PDATPMVITHGWPGTPVE-FLDIIGPLTDPRAHGGDPADAFHLV----IPSLPGFGLSGPLKSAG 149 (388)
T ss_dssp TEEEEEEEECCSS--TTCEEEEEECCTTCCGGG-GHHHHHHHHCGGGGTSCGGGCEEEE----EECCTTSGGGCCCSSCC
T ss_pred CeEEEEEEccCCC--CCCCeEEEECCCCCCHHH-HHHHHHHHhCcccccCCCCCCeEEE----EEcCCCCCCCCCCCCCC
Confidence 5789888776542 456889999999998765 332 2221 0 24331 01111122222100 1
Q ss_pred cCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 167 NGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 167 ~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
.+-++.|+++..++. .. ...++++.|+|+|| .+|..+..+.. -.++|+++.++...|.
T Consensus 150 ~~~~~~a~~~~~l~~----~l---g~~~~~l~G~S~Gg----~ia~~~a~~~p------~~v~~lvl~~~~~~~~ 207 (388)
T 4i19_A 150 WELGRIAMAWSKLMA----SL---GYERYIAQGGDIGA----FTSLLLGAIDP------SHLAGIHVNLLQTNLS 207 (388)
T ss_dssp CCHHHHHHHHHHHHH----HT---TCSSEEEEESTHHH----HHHHHHHHHCG------GGEEEEEESSCCCCBC
T ss_pred CCHHHHHHHHHHHHH----Hc---CCCcEEEEeccHHH----HHHHHHHHhCh------hhceEEEEecCCCCCC
Confidence 233455666555554 32 23479999999999 56666555542 3589999998766554
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00082 Score=64.28 Aligned_cols=59 Identities=22% Similarity=0.344 Sum_probs=44.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
+.+||+.+|+.|.+||....++..+.|+= .| ...++.+..|+||-+. | +.++.+.+
T Consensus 205 ~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~---------------~g-----~~~~~~~y~g~gH~i~---~-~~l~~~~~ 260 (285)
T 4fhz_A 205 KPPVLLVHGDADPVVPFADMSLAGEALAE---------------AG-----FTTYGHVMKGTGHGIA---P-DGLSVALA 260 (285)
T ss_dssp CCCEEEEEETTCSSSCTHHHHHHHHHHHH---------------TT-----CCEEEEEETTCCSSCC---H-HHHHHHHH
T ss_pred cCcccceeeCCCCCcCHHHHHHHHHHHHH---------------CC-----CCEEEEEECCCCCCCC---H-HHHHHHHH
Confidence 46899999999999999998888777640 11 1467788899999874 3 34566777
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
||.
T Consensus 261 fL~ 263 (285)
T 4fhz_A 261 FLK 263 (285)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00065 Score=65.27 Aligned_cols=126 Identities=13% Similarity=0.211 Sum_probs=67.0
Q ss_pred eEEEEEEEcCCCCCCCCeEEEEcCCC---Chhhhh---Hhhhhh-cCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHH
Q 042005 103 SLFYYFVESPQNSSSKPLVLWLNGGP---GFSSFG---AGTMME-LGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARD 175 (432)
Q Consensus 103 ~lFywf~es~~~p~~~PlilWlnGGP---GcSSl~---~G~f~E-~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d 175 (432)
.+..+.+.........|+||++.||. |..... ...|.+ .|=-.+..|-. .. +.+ .+. ...+.+.+
T Consensus 64 ~l~~~~~~P~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~r-g~--~~~---~~~--~~~~d~~~ 135 (323)
T 1lzl_A 64 EVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYR-LA--PET---TFP--GPVNDCYA 135 (323)
T ss_dssp CEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCC-CT--TTS---CTT--HHHHHHHH
T ss_pred eeEEEEEecCCCCCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCC-CC--CCC---CCC--chHHHHHH
Confidence 56666554433345679999999998 655431 122333 35333332211 00 000 011 11122333
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccccc
Q 042005 176 SYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETM 243 (432)
Q Consensus 176 ~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~ 243 (432)
.++++.+..+.+ .....+++|+|+|.||..+-.+|...-+.. ...++++++.+|+++....
T Consensus 136 ~~~~l~~~~~~~-~~d~~~i~l~G~S~GG~la~~~a~~~~~~~------~~~~~~~vl~~p~~~~~~~ 196 (323)
T 1lzl_A 136 ALLYIHAHAEEL-GIDPSRIAVGGQSAGGGLAAGTVLKARDEG------VVPVAFQFLEIPELDDRLE 196 (323)
T ss_dssp HHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHHC------SSCCCEEEEESCCCCTTCC
T ss_pred HHHHHHhhHHHc-CCChhheEEEecCchHHHHHHHHHHHhhcC------CCCeeEEEEECCccCCCcC
Confidence 344444433322 233357999999999965555554433321 2368999999999886543
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.005 Score=59.27 Aligned_cols=111 Identities=14% Similarity=0.075 Sum_probs=61.4
Q ss_pred CCCCCeEEEEcCCCC---hhhhh---Hhhhh-hcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHC
Q 042005 115 SSSKPLVLWLNGGPG---FSSFG---AGTMM-ELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARF 187 (432)
Q Consensus 115 p~~~PlilWlnGGPG---cSSl~---~G~f~-E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~f 187 (432)
....|+||++-||.. ..... ...+. +.|=-.+..|- .+.+ ...-....+|...+++...+.
T Consensus 77 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dy-r~~p----------~~~~~~~~~D~~~a~~~l~~~- 144 (322)
T 3fak_A 77 CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDY-RLAP----------EHPFPAAVEDGVAAYRWLLDQ- 144 (322)
T ss_dssp CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECC-CCTT----------TSCTTHHHHHHHHHHHHHHHH-
T ss_pred CCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeC-CCCC----------CCCCCcHHHHHHHHHHHHHHc-
Confidence 346899999999973 22210 01122 34533333331 1110 001112345555555433333
Q ss_pred CCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccc
Q 042005 188 PEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMM 244 (432)
Q Consensus 188 P~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~ 244 (432)
.+...++.|+|+|+||..+-.+|...-+.. ...++++++..|++|.....
T Consensus 145 -~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~------~~~~~~~vl~~p~~~~~~~~ 194 (322)
T 3fak_A 145 -GFKPQHLSISGDSAGGGLVLAVLVSARDQG------LPMPASAIPISPWADMTCTN 194 (322)
T ss_dssp -TCCGGGEEEEEETHHHHHHHHHHHHHHHTT------CCCCSEEEEESCCCCTTCCC
T ss_pred -CCCCceEEEEEcCcCHHHHHHHHHHHHhcC------CCCceEEEEECCEecCcCCC
Confidence 455678999999999966555555443321 23489999999999876543
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0017 Score=60.40 Aligned_cols=129 Identities=18% Similarity=0.179 Sum_probs=68.8
Q ss_pred CCceEEEEEEEcCC--CCCCCCeEEEEcCCCChhhhhH-------hhhhhcCCeEEcCCCC---eeecCCCCCCC----C
Q 042005 100 DGRSLFYYFVESPQ--NSSSKPLVLWLNGGPGFSSFGA-------GTMMELGPFRVNKDGK---TLYQNEYAWNK----D 163 (432)
Q Consensus 100 ~~~~lFywf~es~~--~p~~~PlilWlnGGPGcSSl~~-------G~f~E~GP~~~~~~~~---~l~~N~~SW~~----~ 163 (432)
.+..+-++.+...+ .....|+||++-|++|.+.. + -++.+.|=..+..+.. .-.....+|.- +
T Consensus 27 ~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~-~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g~~ 105 (280)
T 3i6y_A 27 LNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDEN-FMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQGAG 105 (280)
T ss_dssp TTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSH-HHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTTCC
T ss_pred cCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhH-HhhcccHHHHHhhCCeEEEEeCCcccccccCcccccccccCcc
Confidence 34566666554332 24567999999999887653 2 2333445444443321 01112224432 1
Q ss_pred -CcccCC------hhhHHHHHHHHHHHHH-HCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecc
Q 042005 164 -YKVNGD------IRTARDSYTFLVSWLA-RFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGN 235 (432)
Q Consensus 164 -~~~~~~------~~~a~d~~~fL~~F~~-~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGN 235 (432)
|....+ ......+.+-+..+++ .++. ..+++|+|+|.|| .+|..+..+.. -.++++++.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~G~S~GG----~~a~~~a~~~p------~~~~~~v~~s 173 (280)
T 3i6y_A 106 FYVNATQAPWNRHYQMYDYVVNELPELIESMFPV--SDKRAIAGHSMGG----HGALTIALRNP------ERYQSVSAFS 173 (280)
T ss_dssp TTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE--EEEEEEEEETHHH----HHHHHHHHHCT------TTCSCEEEES
T ss_pred ccccccCCCccchhhHHHHHHHHHHHHHHHhCCC--CCCeEEEEECHHH----HHHHHHHHhCC------ccccEEEEeC
Confidence 111000 0112223333444443 3332 4689999999999 56665555542 2578999999
Q ss_pred cccccc
Q 042005 236 ALIDLE 241 (432)
Q Consensus 236 g~idp~ 241 (432)
|.+++.
T Consensus 174 ~~~~~~ 179 (280)
T 3i6y_A 174 PINNPV 179 (280)
T ss_dssp CCCCGG
T ss_pred Cccccc
Confidence 988764
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0075 Score=56.13 Aligned_cols=103 Identities=13% Similarity=0.074 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCCCChhhhhHhhhhhcCC-eEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCCC
Q 042005 116 SSKPLVLWLNGGPGFSSFGAGTMMELGP-FRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRD 194 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~~G~f~E~GP-~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~ 194 (432)
...|.|+.+.|++|.++. +..+.+... +++- .+...-++..... ..+-++.++++.++++... + ..+
T Consensus 19 ~~~~~lv~lhg~~~~~~~-~~~~~~l~~~~~v~----~~d~~G~~~~~~~-~~~~~~~~~~~~~~i~~~~---~---~~~ 86 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFS-YASLPRLKSDTAVV----GLNCPYARDPENM-NCTHGAMIESFCNEIRRRQ---P---RGP 86 (265)
T ss_dssp TSSEEEEEECCTTCCGGG-GTTSCCCSSSEEEE----EEECTTTTCGGGC-CCCHHHHHHHHHHHHHHHC---S---SCC
T ss_pred CCCCEEEEECCCCCCHHH-HHHHHhcCCCCEEE----EEECCCCCCCCCC-CCCHHHHHHHHHHHHHHhC---C---CCC
Confidence 456889999999998887 555543211 2210 0111111111111 1234566777766666431 1 358
Q ss_pred eEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 195 FFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 195 ~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
+.|+|+|+||..+-.+|.++.++. -.++++++.++.
T Consensus 87 ~~l~GhS~Gg~ia~~~a~~l~~~~-------~~v~~lvl~~~~ 122 (265)
T 3ils_A 87 YHLGGWSSGGAFAYVVAEALVNQG-------EEVHSLIIIDAP 122 (265)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTT-------CCEEEEEEESCC
T ss_pred EEEEEECHhHHHHHHHHHHHHhCC-------CCceEEEEEcCC
Confidence 999999999966666666554432 247888877665
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0068 Score=54.84 Aligned_cols=59 Identities=19% Similarity=0.262 Sum_probs=45.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
+.+||+.+|+.|.+||....++..+.|+ -.| ...+|.+..|+||.+. + ..++.+++
T Consensus 151 ~~Pvl~~hG~~D~~vp~~~~~~~~~~L~---------------~~g-----~~v~~~~ypg~gH~i~---~-~el~~i~~ 206 (210)
T 4h0c_A 151 QTPVFISTGNPDPHVPVSRVQESVTILE---------------DMN-----AAVSQVVYPGRPHTIS---G-DEIQLVNN 206 (210)
T ss_dssp TCEEEEEEEESCTTSCHHHHHHHHHHHH---------------HTT-----CEEEEEEEETCCSSCC---H-HHHHHHHH
T ss_pred CCceEEEecCCCCccCHHHHHHHHHHHH---------------HCC-----CCeEEEEECCCCCCcC---H-HHHHHHHH
Confidence 4799999999999999999888777764 011 1367888899999884 2 34677888
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
||.
T Consensus 207 wL~ 209 (210)
T 4h0c_A 207 TIL 209 (210)
T ss_dssp TTT
T ss_pred HHc
Confidence 885
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00062 Score=64.80 Aligned_cols=59 Identities=17% Similarity=0.010 Sum_probs=41.9
Q ss_pred eEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccc-----ccChHHHHHH
Q 042005 345 RIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVP-----SYQPARALVL 419 (432)
Q Consensus 345 rVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP-----~dqP~~a~~m 419 (432)
++||.+|+.|.+++. .+.+.+.+.- . ....++.++.|+||... ..+++.+.+.
T Consensus 242 P~lii~G~~D~~~~~--~~~~~~~l~~---------------~-----g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~ 299 (311)
T 2c7b_A 242 PALVVTAEYDPLRDE--GELYAYKMKA---------------S-----GSRAVAVRFAGMVHGFVSFYPFVDAGREALDL 299 (311)
T ss_dssp CEEEEEETTCTTHHH--HHHHHHHHHH---------------T-----TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHH
T ss_pred cceEEEcCCCCchHH--HHHHHHHHHH---------------C-----CCCEEEEEeCCCccccccccccCHHHHHHHHH
Confidence 999999999999862 3333333320 0 02467899999999876 3456888888
Q ss_pred HHHHHc
Q 042005 420 FSSFIN 425 (432)
Q Consensus 420 ~~~fl~ 425 (432)
+.+|+.
T Consensus 300 i~~fl~ 305 (311)
T 2c7b_A 300 AAASIR 305 (311)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888885
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.012 Score=58.97 Aligned_cols=121 Identities=11% Similarity=0.068 Sum_probs=68.4
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhh----hhhcCCeEEcCCCCeeecCCCCCCCCC-cccCChhhHH
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGT----MMELGPFRVNKDGKTLYQNEYAWNKDY-KVNGDIRTAR 174 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~----f~E~GP~~~~~~~~~l~~N~~SW~~~~-~~~~~~~~a~ 174 (432)
.+..+..+++.... ....|+||++.|+.|.....+.. |.+.|=-.+..|... +..+... ...+.+..+
T Consensus 176 ~g~~l~~~~~~P~~-~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G-----~G~s~~~~~~~~~~~~~- 248 (415)
T 3mve_A 176 EKGKITAHLHLTNT-DKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPS-----VGYSSKYPLTEDYSRLH- 248 (415)
T ss_dssp SSSEEEEEEEESCS-SSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTT-----SGGGTTSCCCSCTTHHH-
T ss_pred CCEEEEEEEEecCC-CCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCC-----CCCCCCCCCCCCHHHHH-
Confidence 35677777765433 45679999999998874321233 334553333222211 1111100 011122233
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 175 DSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 175 d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
..+..|+...++....++.|+|+|+||..+..+|. .. .-.++++++.+|.++.
T Consensus 249 ---~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~----~~------~~~v~~~v~~~~~~~~ 301 (415)
T 3mve_A 249 ---QAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSF----LE------QEKIKACVILGAPIHD 301 (415)
T ss_dssp ---HHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHH----HT------TTTCCEEEEESCCCSH
T ss_pred ---HHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHH----hC------CcceeEEEEECCcccc
Confidence 44555666666666678999999999965555543 22 1258899998888654
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0003 Score=67.04 Aligned_cols=121 Identities=13% Similarity=0.115 Sum_probs=65.4
Q ss_pred eEEEEEEEcCCCCCCCCeEEEEcCCC---Chhhhh---Hhhhhhc-CCeEEcCCCCeeecCCCCCCCCCcccCChhhHHH
Q 042005 103 SLFYYFVESPQNSSSKPLVLWLNGGP---GFSSFG---AGTMMEL-GPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARD 175 (432)
Q Consensus 103 ~lFywf~es~~~p~~~PlilWlnGGP---GcSSl~---~G~f~E~-GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d 175 (432)
.+..+.+.........|+||++.||+ |.+... ...|.+. |=-.+..|-. .. + ...-....+|
T Consensus 59 ~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~r-g~--~--------~~~~~~~~~d 127 (310)
T 2hm7_A 59 TLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYR-LA--P--------EHKFPAAVED 127 (310)
T ss_dssp EEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCC-CT--T--------TSCTTHHHHH
T ss_pred eEEEEEEecCCCCCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCC-CC--C--------CCCCCccHHH
Confidence 67777775543245679999999975 322210 1233443 4333322210 00 0 0111233445
Q ss_pred HHHHHHHHHHHCC-C--CCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 176 SYTFLVSWLARFP-E--YKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 176 ~~~fL~~F~~~fP-~--~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
...+++ |+.... + ....+++|+|+|+||..+-.+|...-+.. ...++++++.+|+++..
T Consensus 128 ~~~~~~-~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~------~~~v~~~vl~~p~~~~~ 189 (310)
T 2hm7_A 128 AYDALQ-WIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERG------GPALAFQLLIYPSTGYD 189 (310)
T ss_dssp HHHHHH-HHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTT------CCCCCCEEEESCCCCCC
T ss_pred HHHHHH-HHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcC------CCCceEEEEEcCCcCCC
Confidence 444443 333332 2 23467999999999965555554432221 23689999999998765
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.015 Score=55.87 Aligned_cols=61 Identities=10% Similarity=0.171 Sum_probs=44.2
Q ss_pred CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc-----cChHHHHH
Q 042005 344 IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS-----YQPARALV 418 (432)
Q Consensus 344 irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~-----dqP~~a~~ 418 (432)
-++||.+|+.|.++ ..++.+.+.|.=. | ...++.++.|+||.... .+++.+.+
T Consensus 241 pP~li~~G~~D~~~--~~~~~~~~~l~~~---------------g-----~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~ 298 (322)
T 3k6k_A 241 PEMLIHVGSEEALL--SDSTTLAERAGAA---------------G-----VSVELKIWPDMPHVFQMYGKFVNAADISIK 298 (322)
T ss_dssp CCEEEEEESSCTTH--HHHHHHHHHHHHT---------------T-----CCEEEEEETTCCTTGGGGTTTCHHHHHHHH
T ss_pred CcEEEEECCcCccH--HHHHHHHHHHHHC---------------C-----CCEEEEEECCCccccccccccChHHHHHHH
Confidence 48999999999874 3455655555311 1 14678999999998764 34678889
Q ss_pred HHHHHHcC
Q 042005 419 LFSSFING 426 (432)
Q Consensus 419 m~~~fl~~ 426 (432)
.+.+|+..
T Consensus 299 ~i~~fl~~ 306 (322)
T 3k6k_A 299 EICHWISA 306 (322)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99999864
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.039 Score=54.11 Aligned_cols=61 Identities=13% Similarity=0.077 Sum_probs=43.5
Q ss_pred CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccc----ccChHHHHHH
Q 042005 344 IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVP----SYQPARALVL 419 (432)
Q Consensus 344 irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP----~dqP~~a~~m 419 (432)
-+|||.+|+.|.+++. .+.+.+.|+= +| ...++..+.|+||... .++++.+++.
T Consensus 285 pP~Li~~G~~D~l~~~--~~~~~~~L~~---------------~g-----~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~ 342 (365)
T 3ebl_A 285 AKSLIIVSGLDLTCDR--QLAYADALRE---------------DG-----HHVKVVQCENATVGFYLLPNTVHYHEVMEE 342 (365)
T ss_dssp CCEEEEEETTSTTHHH--HHHHHHHHHH---------------TT-----CCEEEEEETTCCTTGGGSSCSHHHHHHHHH
T ss_pred CCEEEEEcCcccchhH--HHHHHHHHHH---------------CC-----CCEEEEEECCCcEEEeccCCCHHHHHHHHH
Confidence 3899999999977654 3556666530 11 2467899999999765 3566788888
Q ss_pred HHHHHcC
Q 042005 420 FSSFING 426 (432)
Q Consensus 420 ~~~fl~~ 426 (432)
+.+||..
T Consensus 343 i~~Fl~~ 349 (365)
T 3ebl_A 343 ISDFLNA 349 (365)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888853
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.021 Score=53.36 Aligned_cols=33 Identities=24% Similarity=0.404 Sum_probs=29.8
Q ss_pred cceEEEEEcCCcccccccChHHHHHHHHHHHcC
Q 042005 394 QNLTFVTVRGAGHFVPSYQPARALVLFSSFING 426 (432)
Q Consensus 394 ~nLTf~~V~~AGHmvP~dqP~~a~~m~~~fl~~ 426 (432)
.+.+++++.+|||+++.++|++..+.+.+|+..
T Consensus 239 p~a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~ 271 (276)
T 2wj6_A 239 PWFSYAKLGGPTHFPAIDVPDRAAVHIREFATA 271 (276)
T ss_dssp TTEEEEECCCSSSCHHHHSHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCcccccCHHHHHHHHHHHHhh
Confidence 367889999999999999999999999999863
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0047 Score=59.61 Aligned_cols=59 Identities=17% Similarity=0.066 Sum_probs=43.3
Q ss_pred eEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccccc-----ChHHHHHH
Q 042005 345 RIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSY-----QPARALVL 419 (432)
Q Consensus 345 rVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~d-----qP~~a~~m 419 (432)
++||.+|+.|.+++ ..+.+.+.|.-.+ .+.++.++.++||..... +++.+.+.
T Consensus 254 P~lii~G~~D~l~~--~~~~~a~~l~~ag--------------------~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~ 311 (323)
T 3ain_A 254 PALIITAEHDPLRD--QGEAYANKLLQSG--------------------VQVTSVGFNNVIHGFVSFFPFIEQGRDAIGL 311 (323)
T ss_dssp CEEEEEETTCTTHH--HHHHHHHHHHHTT--------------------CCEEEEEETTCCTTGGGGTTTCHHHHHHHHH
T ss_pred HHHEEECCCCccHH--HHHHHHHHHHHcC--------------------CCEEEEEECCCccccccccCcCHHHHHHHHH
Confidence 99999999999873 4455555553100 146789999999998764 45788888
Q ss_pred HHHHHc
Q 042005 420 FSSFIN 425 (432)
Q Consensus 420 ~~~fl~ 425 (432)
+.+|+.
T Consensus 312 i~~fl~ 317 (323)
T 3ain_A 312 IGYVLR 317 (323)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888874
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.003 Score=63.35 Aligned_cols=116 Identities=13% Similarity=-0.017 Sum_probs=65.4
Q ss_pred eEEEEEEEcCCCCCCCCeEEEEcCCCCh--hhhhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHH
Q 042005 103 SLFYYFVESPQNSSSKPLVLWLNGGPGF--SSFGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFL 180 (432)
Q Consensus 103 ~lFywf~es~~~p~~~PlilWlnGGPGc--SSl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL 180 (432)
.+..+++...+ +...|+||++.|++|. ..+ .-.|.+.|=-.+..|-.. +.-.. ..-.....+|+.+ .
T Consensus 144 ~l~~~l~~P~~-~~~~P~Vv~~hG~~~~~~~~~-a~~La~~Gy~V~a~D~rG-----~g~~~---~~~~~~~~~d~~~-~ 212 (422)
T 3k2i_A 144 RVRATLFLPPG-PGPFPGIIDIFGIGGGLLEYR-ASLLAGHGFATLALAYYN-----FEDLP---NNMDNISLEYFEE-A 212 (422)
T ss_dssp TEEEEEEECSS-SCCBCEEEEECCTTCSCCCHH-HHHHHTTTCEEEEEECSS-----STTSC---SSCSCEETHHHHH-H
T ss_pred cEEEEEEcCCC-CCCcCEEEEEcCCCcchhHHH-HHHHHhCCCEEEEEccCC-----CCCCC---CCcccCCHHHHHH-H
Confidence 35555554432 3567999999999884 334 256667774333222111 10000 0001112334333 3
Q ss_pred HHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 181 VSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 181 ~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
..|+...++....++.|+|+|+|| .+|..+..... .++++++.+|....
T Consensus 213 ~~~l~~~~~v~~~~i~l~G~S~GG----~lAl~~a~~~p-------~v~a~V~~~~~~~~ 261 (422)
T 3k2i_A 213 VCYMLQHPQVKGPGIGLLGISLGA----DICLSMASFLK-------NVSATVSINGSGIS 261 (422)
T ss_dssp HHHHHTSTTBCCSSEEEEEETHHH----HHHHHHHHHCS-------SEEEEEEESCCSBC
T ss_pred HHHHHhCcCcCCCCEEEEEECHHH----HHHHHHHhhCc-------CccEEEEEcCcccc
Confidence 345666777667799999999999 55555544431 28888888887643
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.044 Score=51.07 Aligned_cols=105 Identities=18% Similarity=0.133 Sum_probs=63.0
Q ss_pred CCCCeEEEEcCCC---Chhh-----hhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHC
Q 042005 116 SSKPLVLWLNGGP---GFSS-----FGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARF 187 (432)
Q Consensus 116 ~~~PlilWlnGGP---GcSS-----l~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~f 187 (432)
...|+|||+-||- |... + .-.+.+.|=-.+..| ..+. | ...-....+|..++++...+..
T Consensus 25 ~~~p~iv~~HGGg~~~g~~~~~~~~~-~~~l~~~g~~Vi~vd-Yrla--P--------e~~~p~~~~D~~~al~~l~~~~ 92 (274)
T 2qru_A 25 EPTNYVVYLHGGGMIYGTKSDLPEEL-KELFTSNGYTVLALD-YLLA--P--------NTKIDHILRTLTETFQLLNEEI 92 (274)
T ss_dssp SSCEEEEEECCSTTTSCCGGGCCHHH-HHHHHTTTEEEEEEC-CCCT--T--------TSCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEEEEeCccccCCChhhchHHH-HHHHHHCCCEEEEeC-CCCC--C--------CCCCcHHHHHHHHHHHHHHhcc
Confidence 4679999999997 5332 2 234555552222222 1111 1 1111345777777777666544
Q ss_pred CCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 188 PEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 188 P~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
.+ ..+++|+|+|-||+.+-.+|..+ +.. ...++++++..|+.|..
T Consensus 93 ~~--~~~i~l~G~SaGG~lA~~~a~~~-~~~------~~~~~~~vl~~~~~~~~ 137 (274)
T 2qru_A 93 IQ--NQSFGLCGRSAGGYLMLQLTKQL-QTL------NLTPQFLVNFYGYTDLE 137 (274)
T ss_dssp TT--TCCEEEEEETHHHHHHHHHHHHH-HHT------TCCCSCEEEESCCSCSG
T ss_pred cc--CCcEEEEEECHHHHHHHHHHHHH-hcC------CCCceEEEEEccccccc
Confidence 22 56899999999997777766544 111 13578888888887743
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0014 Score=60.62 Aligned_cols=59 Identities=10% Similarity=0.099 Sum_probs=51.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.+++|+..|+.|.++|....+++.+.+. +-.++++.+|||+++.++|++..+.+.+
T Consensus 196 ~~P~l~i~G~~D~~~p~~~~~~~~~~~~------------------------~~~~~~i~~~gH~~~~e~P~~~~~~l~~ 251 (257)
T 3c6x_A 196 SIKKIYVWTDQDEIFLPEFQLWQIENYK------------------------PDKVYKVEGGDHKLQLTKTKEIAEILQE 251 (257)
T ss_dssp GSCEEEEECTTCSSSCHHHHHHHHHHSC------------------------CSEEEECCSCCSCHHHHSHHHHHHHHHH
T ss_pred cccEEEEEeCCCcccCHHHHHHHHHHCC------------------------CCeEEEeCCCCCCcccCCHHHHHHHHHH
Confidence 3799999999999999988877777753 4467888999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 252 f~~ 254 (257)
T 3c6x_A 252 VAD 254 (257)
T ss_dssp HHH
T ss_pred HHH
Confidence 985
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0019 Score=60.01 Aligned_cols=59 Identities=15% Similarity=0.210 Sum_probs=51.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.+++|+..|+.|.++|....+.+.+.+. +-+++++.+|||+++.++|++..+++.+
T Consensus 205 ~~P~l~i~G~~D~~~~~~~~~~~~~~~p------------------------~~~~~~i~~~gH~~~~e~P~~~~~~l~~ 260 (264)
T 2wfl_A 205 SVKRAYIFCNEDKSFPVEFQKWFVESVG------------------------ADKVKEIKEADHMGMLSQPREVCKCLLD 260 (264)
T ss_dssp GSCEEEEEETTCSSSCHHHHHHHHHHHC------------------------CSEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred CCCeEEEEeCCcCCCCHHHHHHHHHhCC------------------------CceEEEeCCCCCchhhcCHHHHHHHHHH
Confidence 3799999999999999887777766653 4477899999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 261 f~~ 263 (264)
T 2wfl_A 261 ISD 263 (264)
T ss_dssp HHC
T ss_pred Hhh
Confidence 984
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0011 Score=60.94 Aligned_cols=60 Identities=17% Similarity=0.113 Sum_probs=48.0
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+..|+.|.++|....+.+.+. ..+.+++++.+|||+++.++|++..+.+.+
T Consensus 196 ~~P~l~i~G~~D~~~~~~~~~~~~~~------------------------~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 251 (258)
T 1m33_A 196 SMPFLRLYGYLDGLVPRKVVPMLDKL------------------------WPHSESYIFAKAAHAPFISHPAEFCHLLVA 251 (258)
T ss_dssp CSCEEEEEETTCSSSCGGGCC-CTTT------------------------CTTCEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred CCCEEEEeecCCCCCCHHHHHHHHHh------------------------CccceEEEeCCCCCCccccCHHHHHHHHHH
Confidence 58999999999999987543222211 135678899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 252 fl~~ 255 (258)
T 1m33_A 252 LKQR 255 (258)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 9964
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0037 Score=57.33 Aligned_cols=62 Identities=10% Similarity=0.060 Sum_probs=52.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccC-hHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQ-PARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dq-P~~a~~m~~ 421 (432)
..+|||.+|+.|.++|....+.+.+.+. ..+.+++++.+|||+++.++ |+...+.+.
T Consensus 182 ~~P~Lii~G~~D~~~p~~~~~~~~~~~~----------------------~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~ 239 (247)
T 1tqh_A 182 YAPTFVVQARHDEMINPDSANIIYNEIE----------------------SPVKQIKWYEQSGHVITLDQEKDQLHEDIY 239 (247)
T ss_dssp CSCEEEEEETTCSSSCTTHHHHHHHHCC----------------------CSSEEEEEETTCCSSGGGSTTHHHHHHHHH
T ss_pred CCCEEEEecCCCCCCCcchHHHHHHhcC----------------------CCceEEEEeCCCceeeccCccHHHHHHHHH
Confidence 5899999999999999988888877764 01357899999999999986 799999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+|+..
T Consensus 240 ~Fl~~ 244 (247)
T 1tqh_A 240 AFLES 244 (247)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99964
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0021 Score=60.06 Aligned_cols=60 Identities=13% Similarity=0.294 Sum_probs=51.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.+++|+..|..|.++|....+.+.+.+. +-+++++.+|||+++.++|++..+.+.+
T Consensus 199 ~~P~l~i~G~~D~~~p~~~~~~~~~~~p------------------------~~~~~~i~~aGH~~~~e~P~~~~~~i~~ 254 (273)
T 1xkl_A 199 SVKRVYIVCTEDKGIPEEFQRWQIDNIG------------------------VTEAIEIKGADHMAMLCEPQKLCASLLE 254 (273)
T ss_dssp GSCEEEEEETTCTTTTHHHHHHHHHHHC------------------------CSEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred CCCeEEEEeCCccCCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCCchhcCHHHHHHHHHH
Confidence 3799999999999999887777766653 4577899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 255 fl~~ 258 (273)
T 1xkl_A 255 IAHK 258 (273)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9953
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.061 Score=50.79 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=28.2
Q ss_pred ceEEEEEcCCcccccc-cChHHHHHHHHHHHcCCC
Q 042005 395 NLTFVTVRGAGHFVPS-YQPARALVLFSSFINGTL 428 (432)
Q Consensus 395 nLTf~~V~~AGHmvP~-dqP~~a~~m~~~fl~~~~ 428 (432)
+.+++.+.+ ||+.+. ++|+...+.+.+|+....
T Consensus 249 ~~~~~~i~g-gH~~~~~e~~~~~~~~i~~fl~~~~ 282 (300)
T 1kez_A 249 EHDTVAVPG-DHFTMVQEHADAIARHIDAWLGGGN 282 (300)
T ss_dssp CCEEEEESS-CTTTSSSSCSHHHHHHHHHHHTCC-
T ss_pred CCeEEEecC-CChhhccccHHHHHHHHHHHHHhcc
Confidence 467889999 999996 999999999999997643
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.015 Score=58.92 Aligned_cols=116 Identities=13% Similarity=0.016 Sum_probs=65.9
Q ss_pred eEEEEEEEcCCCCCCCCeEEEEcCCCCh--hhhhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHH
Q 042005 103 SLFYYFVESPQNSSSKPLVLWLNGGPGF--SSFGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFL 180 (432)
Q Consensus 103 ~lFywf~es~~~p~~~PlilWlnGGPGc--SSl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL 180 (432)
.+.-+++...+ +...|+||.+.|+.|. ... .-.|.+.|=-.+..|-......+ ........+|+.+ .
T Consensus 160 ~l~~~l~~P~~-~~~~P~Vv~lhG~~~~~~~~~-a~~La~~Gy~Vla~D~rG~~~~~--------~~~~~~~~~d~~~-a 228 (446)
T 3hlk_A 160 RVRGTLFLPPE-PGPFPGIVDMFGTGGGLLEYR-ASLLAGKGFAVMALAYYNYEDLP--------KTMETLHLEYFEE-A 228 (446)
T ss_dssp TEEEEEEECSS-SCCBCEEEEECCSSCSCCCHH-HHHHHTTTCEEEEECCSSSTTSC--------SCCSEEEHHHHHH-H
T ss_pred eEEEEEEeCCC-CCCCCEEEEECCCCcchhhHH-HHHHHhCCCEEEEeccCCCCCCC--------cchhhCCHHHHHH-H
Confidence 35555554432 3567999999999884 334 25666666333332211100000 0011122344433 3
Q ss_pred HHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 181 VSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 181 ~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
..|+...+.....++.|.|+|+|| .+|..+..... .++++++.+|....
T Consensus 229 ~~~l~~~~~vd~~~i~l~G~S~GG----~lAl~~A~~~p-------~v~a~V~~~~~~~~ 277 (446)
T 3hlk_A 229 MNYLLSHPEVKGPGVGLLGISKGG----ELCLSMASFLK-------GITAAVVINGSVAN 277 (446)
T ss_dssp HHHHHTSTTBCCSSEEEEEETHHH----HHHHHHHHHCS-------CEEEEEEESCCSBC
T ss_pred HHHHHhCCCCCCCCEEEEEECHHH----HHHHHHHHhCC-------CceEEEEEcCcccc
Confidence 456667777767799999999999 55555544431 27888888887643
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0019 Score=59.92 Aligned_cols=59 Identities=15% Similarity=0.286 Sum_probs=50.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+..|+.|.++|....+.+.+.+. +.+++++.++||+++.++|+...+.+.+
T Consensus 210 ~~P~lvi~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 265 (271)
T 1wom_A 210 TVPSLILQCADDIIAPATVGKYMHQHLP------------------------YSSLKQMEARGHCPHMSHPDETIQLIGD 265 (271)
T ss_dssp CSCEEEEEEETCSSSCHHHHHHHHHHSS------------------------SEEEEEEEEESSCHHHHCHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHCC------------------------CCEEEEeCCCCcCccccCHHHHHHHHHH
Confidence 5899999999999999876665555542 4577899999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 266 fl~ 268 (271)
T 1wom_A 266 YLK 268 (271)
T ss_dssp HHH
T ss_pred HHH
Confidence 985
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0011 Score=63.35 Aligned_cols=64 Identities=19% Similarity=0.226 Sum_probs=49.8
Q ss_pred CCeEEEEecCCccccCchhHHHHH--HhcCCCCCccceeeeecCeeeeEEEEecce-EEEEEcCCcccccccChHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAV--KKLGTPVRTAWYPWYTQGEVGGYAVGYQNL-TFVTVRGAGHFVPSYQPARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i--~~L~w~~~~~~~~w~~~~~~~G~~k~~~nL-Tf~~V~~AGHmvP~dqP~~a~~m 419 (432)
.++|||..|+.|.++|..+.+.++ +.+. +...+. +++++.+|||+++.++|+...+.
T Consensus 261 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--------------------~~~p~~~~~~~i~~~gH~~~~e~p~~~~~~ 320 (328)
T 2cjp_A 261 KVPTKFIVGEFDLVYHIPGAKEYIHNGGFK--------------------KDVPLLEEVVVLEGAAHFVSQERPHEISKH 320 (328)
T ss_dssp CSCEEEEEETTCGGGGSTTHHHHHHHSHHH--------------------HHSTTBCCCEEETTCCSCHHHHSHHHHHHH
T ss_pred CCCEEEEEeCCcccccCcchhhhhhhhhHH--------------------HHhcCCeeEEEcCCCCCCcchhCHHHHHHH
Confidence 579999999999999987654444 2221 001345 57899999999999999999999
Q ss_pred HHHHHcC
Q 042005 420 FSSFING 426 (432)
Q Consensus 420 ~~~fl~~ 426 (432)
+.+|+..
T Consensus 321 i~~fl~~ 327 (328)
T 2cjp_A 321 IYDFIQK 327 (328)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9999964
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.36 Score=46.15 Aligned_cols=102 Identities=15% Similarity=0.090 Sum_probs=58.6
Q ss_pred CCCCeEEEEcC--CCChhhhhHhhhhh-cC-CeEE---cCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCC
Q 042005 116 SSKPLVLWLNG--GPGFSSFGAGTMME-LG-PFRV---NKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFP 188 (432)
Q Consensus 116 ~~~PlilWlnG--GPGcSSl~~G~f~E-~G-P~~~---~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP 188 (432)
.+.|.||.+.| ++|.+.. +..+.+ .. =+++ +.-| +.-. +....+-++.++++.++++... +
T Consensus 79 ~~~~~lv~lhG~~~~~~~~~-~~~~~~~L~~~~~v~~~d~~G-------~G~~-~~~~~~~~~~~~~~~~~l~~~~---~ 146 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQV-YSRLAEELDAGRRVSALVPPG-------FHGG-QALPATLTVLVRSLADVVQAEV---A 146 (319)
T ss_dssp CSSCEEEEECCSSTTCSGGG-GHHHHHHHCTTSEEEEEECTT-------SSTT-CCEESSHHHHHHHHHHHHHHHH---T
T ss_pred CCCCeEEEECCCCcCCCHHH-HHHHHHHhCCCceEEEeeCCC-------CCCC-CCCCCCHHHHHHHHHHHHHHhc---C
Confidence 35688999999 6776665 444433 21 1222 2111 1111 1111234456677666666543 1
Q ss_pred CCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 189 EYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 189 ~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
..+++|.|+|+||..+-.+|.++.++ .-.++++++.++...
T Consensus 147 ---~~~~~lvGhS~Gg~vA~~~A~~~~~~-------~~~v~~lvl~~~~~~ 187 (319)
T 3lcr_A 147 ---DGEFALAGHSSGGVVAYEVARELEAR-------GLAPRGVVLIDSYSF 187 (319)
T ss_dssp ---TSCEEEEEETHHHHHHHHHHHHHHHT-------TCCCSCEEEESCCCC
T ss_pred ---CCCEEEEEECHHHHHHHHHHHHHHhc-------CCCccEEEEECCCCC
Confidence 26899999999996666666555433 235788888877643
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=95.94 E-value=0.24 Score=46.27 Aligned_cols=102 Identities=10% Similarity=0.049 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCCCChhhhhHhhhhh-cCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCC-CC
Q 042005 116 SSKPLVLWLNGGPGFSSFGAGTMME-LGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYK-TR 193 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~~G~f~E-~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~-~~ 193 (432)
...|.|+.+-|..|+++. +.-+.+ .. +.+-. +.. + ......+-++.|+++.++++. .. ..
T Consensus 22 ~~~~~l~~~hg~~~~~~~-~~~~~~~L~-~~v~~----~d~-~----~~~~~~~~~~~a~~~~~~i~~-------~~~~~ 83 (283)
T 3tjm_A 22 SSERPLFLVHPIEGSTTV-FHSLASRLS-IPTYG----LQC-T----RAAPLDSIHSLAAYYIDCIRQ-------VQPEG 83 (283)
T ss_dssp SSSCCEEEECCTTCCSGG-GHHHHHHCS-SCEEE----ECC-C----TTSCCSCHHHHHHHHHHHHTT-------TCCSS
T ss_pred CCCCeEEEECCCCCCHHH-HHHHHHhcC-ceEEE----Eec-C----CCCCCCCHHHHHHHHHHHHHH-------hCCCC
Confidence 345678899999998876 454444 33 33210 000 0 000112334556666555542 22 36
Q ss_pred CeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 194 DFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 194 ~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
+++|+|+|+||..+-.+|.++.++... .-++.++++.++.-.
T Consensus 84 ~~~l~GhS~Gg~va~~~a~~~~~~~~~----v~~~~~lvlid~~~~ 125 (283)
T 3tjm_A 84 PYRVAGYSYGACVAFEMCSQLQAQQSP----APTHNSLFLFDGSPT 125 (283)
T ss_dssp CCEEEEETHHHHHHHHHHHHHHHHHTT----SCCCCEEEEESCCTT
T ss_pred CEEEEEECHhHHHHHHHHHHHHHcCCC----CCccceEEEEcCCch
Confidence 899999999997777777766544321 112338888877643
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0089 Score=56.27 Aligned_cols=59 Identities=20% Similarity=0.144 Sum_probs=48.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccccc-ChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSY-QPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~d-qP~~a~~m~~ 421 (432)
.++|||.+|+.|.++|....+...+.+. +.+++++.+|||++..+ .|++..+.+.
T Consensus 257 ~~P~lii~G~~D~~~~~~~~~~l~~~~p------------------------~~~~~~i~~~gH~~~~~~~~~~~~~~i~ 312 (317)
T 1wm1_A 257 HIPAVIVHGRYDMACQVQNAWDLAKAWP------------------------EAELHIVEGAGHSYDEPGILHQLMIATD 312 (317)
T ss_dssp TSCEEEEEETTCSSSCHHHHHHHHHHCT------------------------TSEEEEETTCCSSTTSHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCCCCHHHHHHHHhhCC------------------------CceEEEECCCCCCCCCcchHHHHHHHHH
Confidence 4899999999999999877766666543 56789999999998664 6888999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 313 ~f~~ 316 (317)
T 1wm1_A 313 RFAG 316 (317)
T ss_dssp HHTC
T ss_pred HHhc
Confidence 9974
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.096 Score=49.25 Aligned_cols=126 Identities=11% Similarity=0.014 Sum_probs=64.4
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhH-----hhhhhcCCeEEcCCCCeeecCC--CCCCCCC--ccc----
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGA-----GTMMELGPFRVNKDGKTLYQNE--YAWNKDY--KVN---- 167 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~-----G~f~E~GP~~~~~~~~~l~~N~--~SW~~~~--~~~---- 167 (432)
+..+-+|++...+.....|+||++.|+.+.... + -.+.+.|=..+..+.. ....| ..|+.+. ...
T Consensus 37 ~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~-~~~~p~~~~~~~g~~~g~s~~~~ 114 (304)
T 3d0k_A 37 DRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGAD-YRDFWIPAADRHKLLIVAPTFS-DEIWPGVESYNNGRAFTAAGNPR 114 (304)
T ss_dssp TCCEEEEEEECTTCCTTSCEEEEECCTTCCHHH-HHHHTHHHHHHHTCEEEEEECC-TTTSCHHHHTTTTTCBCTTSCBC
T ss_pred CceEEEEEEeCCCCCCCCcEEEEeCCCCCCHHH-HHHHHHHHHHHCCcEEEEeCCc-cccCCCccccccCccccccCCCC
Confidence 456777766544333567999999999987643 2 2344556544433321 00000 0111110 000
Q ss_pred -CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecc-ccc
Q 042005 168 -GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGN-ALI 238 (432)
Q Consensus 168 -~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGN-g~i 238 (432)
.+....+++.+++ .++.........+++|+|+|.|| .+|..+..... ...++++++.+ |+.
T Consensus 115 ~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~l~G~S~GG----~~a~~~a~~~p-----~~~~~~~vl~~~~~~ 177 (304)
T 3d0k_A 115 HVDGWTYALVARVL-ANIRAAEIADCEQVYLFGHSAGG----QFVHRLMSSQP-----HAPFHAVTAANPGWY 177 (304)
T ss_dssp CGGGSTTHHHHHHH-HHHHHTTSCCCSSEEEEEETHHH----HHHHHHHHHSC-----STTCSEEEEESCSSC
T ss_pred cccchHHHHHHHHH-HHHHhccCCCCCcEEEEEeChHH----HHHHHHHHHCC-----CCceEEEEEecCccc
Confidence 0111122333333 33333334556789999999999 45555554432 12577888665 553
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=95.80 E-value=0.43 Score=43.81 Aligned_cols=64 Identities=11% Similarity=-0.013 Sum_probs=41.6
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
+-++.++++..++..+.+.++ -.++++.|+|.|| .+|..+..+.... .....++++++.++-.+
T Consensus 72 ~~~~~a~~l~~~i~~l~~~~~---~~~~~lvGHS~Gg----~ia~~~~~~~~~~-~~~~~v~~lv~i~~p~~ 135 (254)
T 3ds8_A 72 TPDDWSKWLKIAMEDLKSRYG---FTQMDGVGHSNGG----LALTYYAEDYAGD-KTVPTLRKLVAIGSPFN 135 (254)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC---CSEEEEEEETHHH----HHHHHHHHHSTTC-TTSCEEEEEEEESCCTT
T ss_pred CHHHHHHHHHHHHHHHHHHhC---CCceEEEEECccH----HHHHHHHHHccCC-ccccceeeEEEEcCCcC
Confidence 345677788777777776653 2689999999999 5555555554210 11236888887776433
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=95.75 E-value=0.046 Score=50.32 Aligned_cols=132 Identities=15% Similarity=0.120 Sum_probs=70.1
Q ss_pred CCceEEEEEEEcCC-CCCCCCeEEEEcCCCChhhhhHh-------hhhhcCCeEEcCCC----CeeecCCCCCCC----C
Q 042005 100 DGRSLFYYFVESPQ-NSSSKPLVLWLNGGPGFSSFGAG-------TMMELGPFRVNKDG----KTLYQNEYAWNK----D 163 (432)
Q Consensus 100 ~~~~lFywf~es~~-~p~~~PlilWlnGGPGcSSl~~G-------~f~E~GP~~~~~~~----~~l~~N~~SW~~----~ 163 (432)
.+..+.++.+...+ +.+..|+||++.|++|.+.. +. ++.+.|=..+..|. .+......+|.- +
T Consensus 25 ~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~-~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~ 103 (278)
T 3e4d_A 25 LKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHAN-VMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAG 103 (278)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHH-HHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTTBC
T ss_pred cCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCccc-hhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccCCcc
Confidence 35666666664332 24567999999999887654 22 33444544444442 111111234432 1
Q ss_pred -Cccc------CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccc
Q 042005 164 -YKVN------GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNA 236 (432)
Q Consensus 164 -~~~~------~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 236 (432)
|... ...+..+.+.+-+..+++........+++|+|+|+|| .+|..+..+.. -.+++++..+|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG----~~a~~~a~~~p------~~~~~~v~~~~ 173 (278)
T 3e4d_A 104 FYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGG----HGAMTIALKNP------ERFKSCSAFAP 173 (278)
T ss_dssp TTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHH----HHHHHHHHHCT------TTCSCEEEESC
T ss_pred ccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHH----HHHHHHHHhCC------cccceEEEeCC
Confidence 1110 0001122222233344443222333689999999999 45555544432 25889999999
Q ss_pred cccccc
Q 042005 237 LIDLET 242 (432)
Q Consensus 237 ~idp~~ 242 (432)
.+++..
T Consensus 174 ~~~~~~ 179 (278)
T 3e4d_A 174 IVAPSS 179 (278)
T ss_dssp CSCGGG
T ss_pred cccccC
Confidence 888653
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.072 Score=48.36 Aligned_cols=107 Identities=20% Similarity=0.221 Sum_probs=58.3
Q ss_pred CCCCCeEEEEcCCCChhhhhHhh------hh-hcCCeEEcCCCCeeecCCCCCCCCCc--ccCChhhHHHHHHHHHHHHH
Q 042005 115 SSSKPLVLWLNGGPGFSSFGAGT------MM-ELGPFRVNKDGKTLYQNEYAWNKDYK--VNGDIRTARDSYTFLVSWLA 185 (432)
Q Consensus 115 p~~~PlilWlnGGPGcSSl~~G~------f~-E~GP~~~~~~~~~l~~N~~SW~~~~~--~~~~~~~a~d~~~fL~~F~~ 185 (432)
....|+||++.|+.|.... +.. +. +.|=..+-.+.. .+|..+.. ....+..++++..+++..
T Consensus 38 ~~~~p~vv~~HG~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~-- 108 (263)
T 2uz0_A 38 CEDIPVLYLLHGMSGNHNS-WLKRTNVERLLRGTNLIVVMPNTS------NGWYTDTQYGFDYYTALAEELPQVLKRF-- 108 (263)
T ss_dssp -CCBCEEEEECCTTCCTTH-HHHHSCHHHHTTTCCCEEEECCCT------TSTTSBCTTSCBHHHHHHTHHHHHHHHH--
T ss_pred CCCCCEEEEECCCCCCHHH-HHhccCHHHHHhcCCeEEEEECCC------CCccccCCCcccHHHHHHHHHHHHHHHH--
Confidence 4567999999999987654 222 22 233333333221 12211110 001223344555555433
Q ss_pred HCCCC--CCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc
Q 042005 186 RFPEY--KTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET 242 (432)
Q Consensus 186 ~fP~~--~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~ 242 (432)
+++. ...+++|+|+|+||..+-.+| . .. -.++++++.+|.+++..
T Consensus 109 -~~~~~~~~~~i~l~G~S~Gg~~a~~~a----~-~~------~~~~~~v~~~~~~~~~~ 155 (263)
T 2uz0_A 109 -FPNMTSKREKTFIAGLSMGGYGCFKLA----L-TT------NRFSHAASFSGALSFQN 155 (263)
T ss_dssp -CTTBCCCGGGEEEEEETHHHHHHHHHH----H-HH------CCCSEEEEESCCCCSSS
T ss_pred -hccccCCCCceEEEEEChHHHHHHHHH----h-Cc------cccceEEEecCCcchhh
Confidence 3212 236799999999995444444 3 21 25899999999987653
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.05 Score=50.44 Aligned_cols=126 Identities=14% Similarity=0.120 Sum_probs=67.7
Q ss_pred CCceEEEEEEEcCC-CCCCCCeEEEEcCCCChhhhhH-------hhhhhcCCeEEcCCCC---eeecCCCCCCC----C-
Q 042005 100 DGRSLFYYFVESPQ-NSSSKPLVLWLNGGPGFSSFGA-------GTMMELGPFRVNKDGK---TLYQNEYAWNK----D- 163 (432)
Q Consensus 100 ~~~~lFywf~es~~-~p~~~PlilWlnGGPGcSSl~~-------G~f~E~GP~~~~~~~~---~l~~N~~SW~~----~- 163 (432)
.+..+-++.+...+ +.+..|+|+++-||+|.... + -++.+.|=..+..+.. ......-+|.- +
T Consensus 32 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~-~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~ 110 (283)
T 4b6g_A 32 LQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQN-FITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGF 110 (283)
T ss_dssp TTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSHH-HHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCT
T ss_pred hCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCccc-hhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCcc
Confidence 35566666664332 24667999999999876643 2 2334445334433310 01111224421 1
Q ss_pred CcccC----------ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEe
Q 042005 164 YKVNG----------DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAM 233 (432)
Q Consensus 164 ~~~~~----------~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~I 233 (432)
|.... .+..++++..++++ .++. ..+++|+|+|+|| .+|..+..+.. -.+++++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~--~~~~~l~G~S~GG----~~a~~~a~~~p------~~~~~~~~ 175 (283)
T 4b6g_A 111 YLNATEQPWAANYQMYDYILNELPRLIEK---HFPT--NGKRSIMGHSMGG----HGALVLALRNQ------ERYQSVSA 175 (283)
T ss_dssp TSBCCSTTGGGTCBHHHHHHTHHHHHHHH---HSCE--EEEEEEEEETHHH----HHHHHHHHHHG------GGCSCEEE
T ss_pred cccCccCcccchhhHHHHHHHHHHHHHHH---hCCC--CCCeEEEEEChhH----HHHHHHHHhCC------ccceeEEE
Confidence 11100 11123344444443 2332 3579999999999 45555544432 25789999
Q ss_pred cccccccc
Q 042005 234 GNALIDLE 241 (432)
Q Consensus 234 GNg~idp~ 241 (432)
.+|.+++.
T Consensus 176 ~s~~~~~~ 183 (283)
T 4b6g_A 176 FSPILSPS 183 (283)
T ss_dssp ESCCCCGG
T ss_pred ECCccccc
Confidence 99988764
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=95.22 E-value=0.18 Score=47.12 Aligned_cols=120 Identities=14% Similarity=0.226 Sum_probs=62.7
Q ss_pred EEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhh--HhhhhhcCCeEE-cCCCCeeecCCCCCCC---C
Q 042005 90 YSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFG--AGTMMELGPFRV-NKDGKTLYQNEYAWNK---D 163 (432)
Q Consensus 90 ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~--~G~f~E~GP~~~-~~~~~~l~~N~~SW~~---~ 163 (432)
.+.++++.+ +..++|.-... + +.|.||.+.|+||.+... ..+|...| |++ -.| ..-+..+. +
T Consensus 15 ~~~~~~~~~--g~~l~~~~~g~---~-~g~~vvllHG~~~~~~~~~~~~~~~~~~-~~vi~~D-----~~G~G~S~~~~~ 82 (317)
T 1wm1_A 15 DSGWLDTGD--GHRIYWELSGN---P-NGKPAVFIHGGPGGGISPHHRQLFDPER-YKVLLFD-----QRGCGRSRPHAS 82 (317)
T ss_dssp EEEEEECSS--SCEEEEEEEEC---T-TSEEEEEECCTTTCCCCGGGGGGSCTTT-EEEEEEC-----CTTSTTCBSTTC
T ss_pred eeeEEEcCC--CcEEEEEEcCC---C-CCCcEEEECCCCCcccchhhhhhccccC-CeEEEEC-----CCCCCCCCCCcc
Confidence 366888753 46787765432 1 235588999999854310 12232212 332 111 11111111 0
Q ss_pred CcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 164 YKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 164 ~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
....+-++.++|+.. +.+.. .-.+++|.|+|+|| .+|..+..+.. -.++++++.++..
T Consensus 83 ~~~~~~~~~~~dl~~----l~~~l---~~~~~~lvGhS~Gg----~ia~~~a~~~p------~~v~~lvl~~~~~ 140 (317)
T 1wm1_A 83 LDNNTTWHLVADIER----LREMA---GVEQWLVFGGSWGS----TLALAYAQTHP------ERVSEMVLRGIFT 140 (317)
T ss_dssp CTTCSHHHHHHHHHH----HHHHT---TCSSEEEEEETHHH----HHHHHHHHHCG------GGEEEEEEESCCC
T ss_pred cccccHHHHHHHHHH----HHHHc---CCCcEEEEEeCHHH----HHHHHHHHHCC------hheeeeeEeccCC
Confidence 001122344555444 44433 23579999999999 56666555542 2578888877654
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=95.22 E-value=0.045 Score=50.33 Aligned_cols=131 Identities=15% Similarity=0.150 Sum_probs=67.7
Q ss_pred CCceEEEEEEEc-CCCCCCCCeEEEEcCCCChhhhhH-------hhhhhcCCeEEcCCC----CeeecCCCCCCC----C
Q 042005 100 DGRSLFYYFVES-PQNSSSKPLVLWLNGGPGFSSFGA-------GTMMELGPFRVNKDG----KTLYQNEYAWNK----D 163 (432)
Q Consensus 100 ~~~~lFywf~es-~~~p~~~PlilWlnGGPGcSSl~~-------G~f~E~GP~~~~~~~----~~l~~N~~SW~~----~ 163 (432)
.+..+-++.+.. ..+++..|+||++-||+|.+.. + -.+.+.|=..+..|. ........+|.. +
T Consensus 26 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~-~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~ 104 (282)
T 3fcx_A 26 LNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQN-FISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAG 104 (282)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHH-HHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCCCCC
T ss_pred cCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCccc-hhhcchHHHHhhcCCeEEEEeccccCccccccccccccccCCcc
Confidence 345566665543 3234678999999999886654 2 223355543443331 111112223322 1
Q ss_pred -CcccCCh------hhHHHHHHHHHHHHH-HCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecc
Q 042005 164 -YKVNGDI------RTARDSYTFLVSWLA-RFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGN 235 (432)
Q Consensus 164 -~~~~~~~------~~a~d~~~fL~~F~~-~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGN 235 (432)
|....+. ....++.+.+..+.+ .++ ....+++|+|.|+|| .+|..+..+.. -.++++++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~i~l~G~S~GG----~~a~~~a~~~p------~~~~~~v~~s 173 (282)
T 3fcx_A 105 FYVDATEDPWKTNYRMYSYVTEELPQLINANFP-VDPQRMSIFGHSMGG----HGALICALKNP------GKYKSVSAFA 173 (282)
T ss_dssp TTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSS-EEEEEEEEEEETHHH----HHHHHHHHTST------TTSSCEEEES
T ss_pred cccccCcccccchhhHHHHHHHHHHHHHHHHcC-CCccceEEEEECchH----HHHHHHHHhCc------ccceEEEEeC
Confidence 1111110 112233334455554 343 334579999999999 55555554432 2478899989
Q ss_pred ccccccc
Q 042005 236 ALIDLET 242 (432)
Q Consensus 236 g~idp~~ 242 (432)
|.+++..
T Consensus 174 ~~~~~~~ 180 (282)
T 3fcx_A 174 PICNPVL 180 (282)
T ss_dssp CCCCGGG
T ss_pred CccCccc
Confidence 9887643
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=95.20 E-value=0.018 Score=54.73 Aligned_cols=63 Identities=11% Similarity=0.094 Sum_probs=47.0
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
+-.++||+..|..|.+.+.. .+..+. ++.+++++.+|||+++.++|+...+.|
T Consensus 241 ~i~~P~Lli~g~~D~~~~~~----~~~~~~-----------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i 293 (316)
T 3c5v_A 241 SCPIPKLLLLAGVDRLDKDL----TIGQMQ-----------------------GKFQMQVLPQCGHAVHEDAPDKVAEAV 293 (316)
T ss_dssp HSSSCEEEEESSCCCCCHHH----HHHHHT-----------------------TCSEEEECCCCSSCHHHHSHHHHHHHH
T ss_pred cCCCCEEEEEecccccccHH----HHHhhC-----------------------CceeEEEcCCCCCcccccCHHHHHHHH
Confidence 34689999999999764321 122221 234678999999999999999999999
Q ss_pred HHHHcCCCCC
Q 042005 421 SSFINGTLPP 430 (432)
Q Consensus 421 ~~fl~~~~~~ 430 (432)
.+|+....++
T Consensus 294 ~~fl~~~~~~ 303 (316)
T 3c5v_A 294 ATFLIRHRFA 303 (316)
T ss_dssp HHHHHHTTSS
T ss_pred HHHHHhcccc
Confidence 9999765544
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=95.12 E-value=0.03 Score=53.57 Aligned_cols=129 Identities=15% Similarity=0.129 Sum_probs=69.3
Q ss_pred EEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCC---Chhhhh---Hhhhhh-cCCeEEcCCCCeeecCCCCCCCCCcc
Q 042005 94 VNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGP---GFSSFG---AGTMME-LGPFRVNKDGKTLYQNEYAWNKDYKV 166 (432)
Q Consensus 94 l~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGP---GcSSl~---~G~f~E-~GP~~~~~~~~~l~~N~~SW~~~~~~ 166 (432)
+.+....+ .+..+.+..... ..|+||++-||+ |..... .-.|.+ .|=-.+..|- .+.+ .
T Consensus 66 ~~~~~~~g-~i~~~~~~p~~~--~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dy-r~~p-~--------- 131 (326)
T 3ga7_A 66 CAVPTPYG-DVTTRLYSPQPT--SQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDY-SLSP-Q--------- 131 (326)
T ss_dssp EEECCTTS-CEEEEEEESSSS--CSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECC-CCTT-T---------
T ss_pred EEeecCCC-CeEEEEEeCCCC--CCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeC-CCCC-C---------
Confidence 44443333 677777755432 349999999998 654431 122333 4644443331 1100 0
Q ss_pred cCChhhHHHHHHHHHHHHHHC-CC--CCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 167 NGDIRTARDSYTFLVSWLARF-PE--YKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 167 ~~~~~~a~d~~~fL~~F~~~f-P~--~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
..-....+|...+++ |+..+ .+ ....+++|+|+|.||..+-.+|...-+.. .....++++++..|+.+..
T Consensus 132 ~~~~~~~~D~~~a~~-~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~----~~~~~~~~~vl~~~~~~~~ 204 (326)
T 3ga7_A 132 ARYPQAIEETVAVCS-YFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKH----IRCGNVIAILLWYGLYGLQ 204 (326)
T ss_dssp SCTTHHHHHHHHHHH-HHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHT----CCSSEEEEEEEESCCCSCS
T ss_pred CCCCcHHHHHHHHHH-HHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcC----CCccCceEEEEeccccccC
Confidence 011123355554443 33333 22 23468999999999966555554443321 1123589999988887653
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=95.11 E-value=0.21 Score=46.53 Aligned_cols=57 Identities=14% Similarity=0.054 Sum_probs=42.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccccc-ChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSY-QPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~d-qP~~a~~m~~ 421 (432)
.++|||.+|+.|.++|....+.+.+.+. +.+++++.+|||++... .+++..+.++
T Consensus 255 ~~P~Lii~G~~D~~~~~~~~~~~~~~~p------------------------~~~~~~i~~~gH~~~~~~~~~~~~~~i~ 310 (313)
T 1azw_A 255 DIPGVIVHGRYDVVCPLQSAWDLHKAWP------------------------KAQLQISPASGHSAFEPENVDALVRATD 310 (313)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHCT------------------------TSEEEEETTCCSSTTSHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCcCCHHHHHHHHhhCC------------------------CcEEEEeCCCCCCcCCCccHHHHHHHHh
Confidence 4899999999999999877776666643 55789999999987432 2445555555
Q ss_pred HH
Q 042005 422 SF 423 (432)
Q Consensus 422 ~f 423 (432)
+|
T Consensus 311 ~f 312 (313)
T 1azw_A 311 GF 312 (313)
T ss_dssp HH
T ss_pred hc
Confidence 54
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=95.05 E-value=0.49 Score=48.11 Aligned_cols=65 Identities=18% Similarity=0.268 Sum_probs=47.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc-cChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS-YQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~-dqP~~a~~m~~ 421 (432)
..+|+|++|..|.++|...+++..+.+.= .| ...+|.+..++||.... ..=..++.-++
T Consensus 344 ~~PvlI~hG~~D~vVP~~~s~~l~~~l~~---------------~G-----~~V~~~~y~~~~H~~~~~~~~~d~l~WL~ 403 (462)
T 3guu_A 344 KFPRFIWHAIPDEIVPYQPAATYVKEQCA---------------KG-----ANINFSPYPIAEHLTAEIFGLVPSLWFIK 403 (462)
T ss_dssp CSEEEEEEETTCSSSCHHHHHHHHHHHHH---------------TT-----CEEEEEEESSCCHHHHHHHTHHHHHHHHH
T ss_pred CCCEEEEeCCCCCcCCHHHHHHHHHHHHH---------------cC-----CCeEEEEECcCCccCchhhhHHHHHHHHH
Confidence 47999999999999999999999988640 11 14677888999999875 22334455555
Q ss_pred HHHcCC
Q 042005 422 SFINGT 427 (432)
Q Consensus 422 ~fl~~~ 427 (432)
+-+.|+
T Consensus 404 ~r~~G~ 409 (462)
T 3guu_A 404 QAFDGT 409 (462)
T ss_dssp HHHHTC
T ss_pred HHhCCC
Confidence 555665
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.98 E-value=0.14 Score=51.94 Aligned_cols=63 Identities=17% Similarity=0.128 Sum_probs=45.5
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
+.+++++|+..|++..-..++...+.|++++|+|||| .+|..+..+.. -.+.|+++-++.+..
T Consensus 101 t~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG----~lA~~~~~~yP------~~v~g~i~ssapv~~ 163 (446)
T 3n2z_B 101 TSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGG----MLAAWFRMKYP------HMVVGALAASAPIWQ 163 (446)
T ss_dssp SHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHH----HHHHHHHHHCT------TTCSEEEEETCCTTC
T ss_pred CHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHH----HHHHHHHHhhh------ccccEEEEeccchhc
Confidence 4568899999988877776655567799999999999 66666665542 246777776655443
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=94.98 E-value=0.32 Score=46.61 Aligned_cols=101 Identities=11% Similarity=0.158 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCCChhhhhHhhhhh-cCC-eEE---cCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCC
Q 042005 117 SKPLVLWLNGGPGFSSFGAGTMME-LGP-FRV---NKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYK 191 (432)
Q Consensus 117 ~~PlilWlnGGPGcSSl~~G~f~E-~GP-~~~---~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~ 191 (432)
+.|.++++.|+.|.+.. +.-+.+ ..+ +.+ +..+ ++-. .....+-++.|++....+.. ..+
T Consensus 100 ~~~~l~~lhg~~~~~~~-~~~l~~~L~~~~~v~~~d~~g-------~~~~-~~~~~~~~~~a~~~~~~i~~---~~~--- 164 (329)
T 3tej_A 100 NGPTLFCFHPASGFAWQ-FSVLSRYLDPQWSIIGIQSPR-------PNGP-MQTAANLDEVCEAHLATLLE---QQP--- 164 (329)
T ss_dssp SSCEEEEECCTTSCCGG-GGGGGGTSCTTCEEEEECCCT-------TTSH-HHHCSSHHHHHHHHHHHHHH---HCS---
T ss_pred CCCcEEEEeCCcccchH-HHHHHHhcCCCCeEEEeeCCC-------CCCC-CCCCCCHHHHHHHHHHHHHH---hCC---
Confidence 45789999999887766 444433 322 221 1111 0000 00011234455555555443 233
Q ss_pred CCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 192 TRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 192 ~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
..+++|.|+|+||..+-.+|.++.++. -.++++++.++...
T Consensus 165 ~~~~~l~G~S~Gg~ia~~~a~~L~~~~-------~~v~~lvl~d~~~~ 205 (329)
T 3tej_A 165 HGPYYLLGYSLGGTLAQGIAARLRARG-------EQVAFLGLLDTWPP 205 (329)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHTT-------CCEEEEEEESCCCT
T ss_pred CCCEEEEEEccCHHHHHHHHHHHHhcC-------CcccEEEEeCCCCC
Confidence 358999999999977777777765543 35888888887654
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=94.96 E-value=0.21 Score=45.89 Aligned_cols=121 Identities=17% Similarity=0.164 Sum_probs=63.4
Q ss_pred CceEEEEEEEcCC--CCCCCCeEEEEcCCCChhhhh----------HhhhhhcC---CeEE-cCCCCeeecCCCCCCCCC
Q 042005 101 GRSLFYYFVESPQ--NSSSKPLVLWLNGGPGFSSFG----------AGTMMELG---PFRV-NKDGKTLYQNEYAWNKDY 164 (432)
Q Consensus 101 ~~~lFywf~es~~--~p~~~PlilWlnGGPGcSSl~----------~G~f~E~G---P~~~-~~~~~~l~~N~~SW~~~~ 164 (432)
+..+-++.+.-.+ ..+..|+||++.|++|....- .-.|.+.| ++.+ ..+... ...+|...+
T Consensus 43 ~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~---~~~~~~~~~ 119 (268)
T 1jjf_A 43 NSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNA---AGPGIADGY 119 (268)
T ss_dssp TEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCC---CCTTCSCHH
T ss_pred CCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCC---CCccccccH
Confidence 4556565553322 245679999999998754210 13344555 4443 333211 011111111
Q ss_pred cccCChhhHHHHHHHHHHHHH-HCCCC-CCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 165 KVNGDIRTARDSYTFLVSWLA-RFPEY-KTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 165 ~~~~~~~~a~d~~~fL~~F~~-~fP~~-~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
....+++.+-+..|++ .++.. ...+++|+|.|+|| .+|..+..+.. -.++++++.+|..+
T Consensus 120 -----~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG----~~a~~~a~~~p------~~~~~~v~~s~~~~ 181 (268)
T 1jjf_A 120 -----ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGG----GQSFNIGLTNL------DKFAYIGPISAAPN 181 (268)
T ss_dssp -----HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHH----HHHHHHHHTCT------TTCSEEEEESCCTT
T ss_pred -----HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHH----HHHHHHHHhCc------hhhhheEEeCCCCC
Confidence 1122233344445554 34321 34679999999999 55655554432 24788888888654
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=94.87 E-value=0.033 Score=52.21 Aligned_cols=119 Identities=18% Similarity=0.231 Sum_probs=63.1
Q ss_pred EeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhh--HhhhhhcCCeEEc-CCCCeeecCCCCCCC---CC
Q 042005 91 SGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFG--AGTMMELGPFRVN-KDGKTLYQNEYAWNK---DY 164 (432)
Q Consensus 91 sGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~--~G~f~E~GP~~~~-~~~~~l~~N~~SW~~---~~ 164 (432)
.+++++.+ +..++|.-... + +.|.||.|.|+||.+... ..+|...| |++- .| ..-+.-+. ..
T Consensus 13 ~~~~~~~~--g~~l~y~~~G~---~-~g~pvvllHG~~~~~~~~~~~~~~~~~~-~~vi~~D-----~~G~G~S~~~~~~ 80 (313)
T 1azw_A 13 QGSLKVDD--RHTLYFEQCGN---P-HGKPVVMLHGGPGGGCNDKMRRFHDPAK-YRIVLFD-----QRGSGRSTPHADL 80 (313)
T ss_dssp EEEEECSS--SCEEEEEEEEC---T-TSEEEEEECSTTTTCCCGGGGGGSCTTT-EEEEEEC-----CTTSTTSBSTTCC
T ss_pred cceEEcCC--CCEEEEEecCC---C-CCCeEEEECCCCCccccHHHHHhcCcCc-ceEEEEC-----CCCCcCCCCCccc
Confidence 67888752 46787765432 2 235588999999854321 12222211 3331 11 11111111 00
Q ss_pred cccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 165 KVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 165 ~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
...+-++.++|+..+ .+.. .-.+++|.|+|+|| .+|..+..+.. -.++++++.++..
T Consensus 81 ~~~~~~~~~~dl~~l----~~~l---~~~~~~lvGhSmGg----~ia~~~a~~~p------~~v~~lvl~~~~~ 137 (313)
T 1azw_A 81 VDNTTWDLVADIERL----RTHL---GVDRWQVFGGSWGS----TLALAYAQTHP------QQVTELVLRGIFL 137 (313)
T ss_dssp TTCCHHHHHHHHHHH----HHHT---TCSSEEEEEETHHH----HHHHHHHHHCG------GGEEEEEEESCCC
T ss_pred ccccHHHHHHHHHHH----HHHh---CCCceEEEEECHHH----HHHHHHHHhCh------hheeEEEEecccc
Confidence 011223445554444 4433 33579999999999 56666655542 2588988887654
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=94.83 E-value=0.021 Score=53.75 Aligned_cols=59 Identities=14% Similarity=0.164 Sum_probs=42.3
Q ss_pred CCeEEEEecCCccccCch-hHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVT-CTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~-Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
.++||+..|+.|.+++.. ....|-+. ..+++..++ ++||+++.++|++..+.|.
T Consensus 231 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~------------------------~~~~~~~~~-~~GH~~~~E~P~~v~~~i~ 285 (291)
T 3qyj_A 231 SCPVLVLWGEKGIIGRKYDVLATWRER------------------------AIDVSGQSL-PCGHFLPEEAPEETYQAIY 285 (291)
T ss_dssp CSCEEEEEETTSSHHHHSCHHHHHHTT------------------------BSSEEEEEE-SSSSCHHHHSHHHHHHHHH
T ss_pred ccceEEEecccccccchhhHHHHHHhh------------------------cCCcceeec-cCCCCchhhCHHHHHHHHH
Confidence 479999999999765432 22223211 124455555 5999999999999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+|+..
T Consensus 286 ~fL~~ 290 (291)
T 3qyj_A 286 NFLTH 290 (291)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99863
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=94.62 E-value=0.071 Score=50.79 Aligned_cols=58 Identities=7% Similarity=0.095 Sum_probs=45.2
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+|||.+|+.|.++|....+.+.+.+. ..+.+++++.+|||+++ ++|+...+.++
T Consensus 199 i~~PvLii~G~~D~~vp~~~~~~l~~~i~----------------------~~~~~l~~i~~agH~~~-e~p~~~~~fl~ 255 (305)
T 1tht_A 199 TSVPLIAFTANNDDWVKQEEVYDMLAHIR----------------------TGHCKLYSLLGSSHDLG-ENLVVLRNFYQ 255 (305)
T ss_dssp CCSCEEEEEETTCTTSCHHHHHHHHTTCT----------------------TCCEEEEEETTCCSCTT-SSHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCccCHHHHHHHHHhcC----------------------CCCcEEEEeCCCCCchh-hCchHHHHHHH
Confidence 35899999999999999988777776653 12457789999999985 99987655554
Q ss_pred H
Q 042005 422 S 422 (432)
Q Consensus 422 ~ 422 (432)
+
T Consensus 256 ~ 256 (305)
T 1tht_A 256 S 256 (305)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=94.59 E-value=0.015 Score=55.34 Aligned_cols=123 Identities=9% Similarity=0.134 Sum_probs=65.4
Q ss_pred eEEEEEEEcCCCCCCCCeEEEEcCCC---Chhhhh---Hhhhh-hcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHH
Q 042005 103 SLFYYFVESPQNSSSKPLVLWLNGGP---GFSSFG---AGTMM-ELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARD 175 (432)
Q Consensus 103 ~lFywf~es~~~p~~~PlilWlnGGP---GcSSl~---~G~f~-E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d 175 (432)
.+..+.++. ....|+||++.||. |..... ...|. +.|=-.+..|-. . .+.+ .+. ...+.+.+
T Consensus 67 ~i~~~~y~~---~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyr-g--~g~~---~~p--~~~~d~~~ 135 (311)
T 1jji_A 67 DIRVRVYQQ---KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYR-L--APEH---KFP--AAVYDCYD 135 (311)
T ss_dssp EEEEEEEES---SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECC-C--TTTS---CTT--HHHHHHHH
T ss_pred cEEEEEEcC---CCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCC-C--CCCC---CCC--CcHHHHHH
Confidence 455555532 34679999999998 544321 12233 345222222210 0 0000 011 11223344
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccccc
Q 042005 176 SYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETM 243 (432)
Q Consensus 176 ~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~ 243 (432)
.++++.+..+.+ .....++.|+|+|.||..+-.+|...-+.. ...++++++.+|+++....
T Consensus 136 ~~~~l~~~~~~~-~~d~~~i~l~G~S~GG~la~~~a~~~~~~~------~~~~~~~vl~~p~~~~~~~ 196 (311)
T 1jji_A 136 ATKWVAENAEEL-RIDPSKIFVGGDSAGGNLAAAVSIMARDSG------EDFIKHQILIYPVVNFVAP 196 (311)
T ss_dssp HHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTT------CCCEEEEEEESCCCCSSSC
T ss_pred HHHHHHhhHHHh-CCCchhEEEEEeCHHHHHHHHHHHHHHhcC------CCCceEEEEeCCccCCCCC
Confidence 445555444433 233457999999999966555554433221 2368999999999987544
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=94.42 E-value=0.029 Score=53.68 Aligned_cols=121 Identities=17% Similarity=0.160 Sum_probs=67.4
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCC---Chhhhh---Hhhh-hhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhH
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGP---GFSSFG---AGTM-MELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTA 173 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGP---GcSSl~---~G~f-~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a 173 (432)
+..+..+.+.... ...|+||++-||. |..... ...+ .+.|=-.+..|- .+.+ .+ .-....
T Consensus 70 G~~i~~~~~~P~~--~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dy-r~~p-~~---------~~p~~~ 136 (317)
T 3qh4_A 70 GRPVPVRIYRAAP--TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDY-RLAP-EH---------PYPAAL 136 (317)
T ss_dssp SCEEEEEEEECSC--SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECC-CCTT-TS---------CTTHHH
T ss_pred CCeEEEEEEecCC--CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecC-CCCC-CC---------CCchHH
Confidence 4467777775543 5679999999986 332210 1222 245644443331 1111 01 111233
Q ss_pred HHHHHH---HHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 174 RDSYTF---LVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 174 ~d~~~f---L~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
+|...+ +.+-...+ .....++.|+|+|.||..+-.+|...-++. ...++++++..|++|..
T Consensus 137 ~D~~~a~~~l~~~~~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~------~~~~~~~vl~~p~~~~~ 200 (317)
T 3qh4_A 137 HDAIEVLTWVVGNATRL-GFDARRLAVAGSSAGATLAAGLAHGAADGS------LPPVIFQLLHQPVLDDR 200 (317)
T ss_dssp HHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTS------SCCCCEEEEESCCCCSS
T ss_pred HHHHHHHHHHHhhHHhh-CCCcceEEEEEECHHHHHHHHHHHHHHhcC------CCCeeEEEEECceecCC
Confidence 344333 33322222 344457999999999976666655443322 34689999999999876
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=94.35 E-value=0.27 Score=45.14 Aligned_cols=130 Identities=19% Similarity=0.197 Sum_probs=68.1
Q ss_pred CCceEEEEEEEcCC--CCCCCCeEEEEcCCCChhhhhHh-------hhhhcCCeEEcCCCC---eeecCCCCCCC----C
Q 042005 100 DGRSLFYYFVESPQ--NSSSKPLVLWLNGGPGFSSFGAG-------TMMELGPFRVNKDGK---TLYQNEYAWNK----D 163 (432)
Q Consensus 100 ~~~~lFywf~es~~--~p~~~PlilWlnGGPGcSSl~~G-------~f~E~GP~~~~~~~~---~l~~N~~SW~~----~ 163 (432)
.+..+-++.+.-.+ ..+..|+||++-||+|.... +. ++.+.|=..+..+.. .-.....+|.- +
T Consensus 25 ~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~-~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g~~ 103 (280)
T 3ls2_A 25 THCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDEN-FMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQGAG 103 (280)
T ss_dssp TTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHH-HHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTTCC
T ss_pred cCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhh-hhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccCCc
Confidence 35566666654332 24567999999999876643 22 333445444444421 01112223321 1
Q ss_pred -Cccc------CChhhHHHHHHHHHHHHHH-CCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecc
Q 042005 164 -YKVN------GDIRTARDSYTFLVSWLAR-FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGN 235 (432)
Q Consensus 164 -~~~~------~~~~~a~d~~~fL~~F~~~-fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGN 235 (432)
|... ........+.+-+..+++. ++. ..+++|+|+|+|| .+|..+..+.. -.+++++..+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~G~S~GG----~~a~~~a~~~p------~~~~~~~~~s 171 (280)
T 3ls2_A 104 FYVNATQAPYNTHFNMYDYVVNELPALIEQHFPV--TSTKAISGHSMGG----HGALMIALKNP------QDYVSASAFS 171 (280)
T ss_dssp TTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSE--EEEEEEEEBTHHH----HHHHHHHHHST------TTCSCEEEES
T ss_pred cccccccccccccccHHHHHHHHHHHHHHhhCCC--CCCeEEEEECHHH----HHHHHHHHhCc------hhheEEEEec
Confidence 1110 0011122222333344432 332 3679999999999 56665555432 2578999999
Q ss_pred ccccccc
Q 042005 236 ALIDLET 242 (432)
Q Consensus 236 g~idp~~ 242 (432)
|.+++..
T Consensus 172 ~~~~~~~ 178 (280)
T 3ls2_A 172 PIVNPIN 178 (280)
T ss_dssp CCSCGGG
T ss_pred CccCccc
Confidence 9887643
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=94.32 E-value=0.12 Score=50.98 Aligned_cols=65 Identities=18% Similarity=0.084 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 173 ARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 173 a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
..|....+..+.+.+.--...+++|+|+|+||+.+-.+|..+.... ...++++|++.+.+..|..
T Consensus 148 ~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~----~~~~~~~~~~~~~~~~~l~ 212 (397)
T 3h2g_A 148 TIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHL----SKEFHLVASAPISGPYALE 212 (397)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHC----TTTSEEEEEEEESCCSSHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhc----CcCcceEEEecccccccHH
Confidence 3445556666665542111358999999999976655554444432 1246899999998877654
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=94.12 E-value=0.54 Score=46.28 Aligned_cols=128 Identities=13% Similarity=0.127 Sum_probs=70.4
Q ss_pred EEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhh----------------------hhHhhhhhcCCeEEcCCCC
Q 042005 94 VNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSS----------------------FGAGTMMELGPFRVNKDGK 151 (432)
Q Consensus 94 l~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSS----------------------l~~G~f~E~GP~~~~~~~~ 151 (432)
+.+....+..+..+++...+.....|+||++.|+.|... + .-.|.+.|--.+..|-.
T Consensus 90 v~~~~~~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~-a~~la~~G~~Vl~~D~r 168 (391)
T 3g8y_A 90 WEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSM-ALNMVKEGYVAVAVDNA 168 (391)
T ss_dssp EEECCSTTCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCH-HHHHHTTTCEEEECCCT
T ss_pred EEEEcCCCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHH-HHHHHHCCCEEEEecCC
Confidence 334433456787777754332456799999999865442 2 13466777666554421
Q ss_pred ee--e----cCCCCCCCCCcccCChhhH---------------HHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHH
Q 042005 152 TL--Y----QNEYAWNKDYKVNGDIRTA---------------RDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQL 210 (432)
Q Consensus 152 ~l--~----~N~~SW~~~~~~~~~~~~a---------------~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~l 210 (432)
.. . .....|+. .....+ .|... ...|+...|+....++.|+|+|+||. +
T Consensus 169 g~G~s~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~D~~~-a~d~l~~~~~vd~~rI~v~G~S~GG~----~ 238 (391)
T 3g8y_A 169 AAGEASDLECYDKGWNY-----DYDVVSRFLLELGWSWLGYTSYLDMQ-VLNWMKAQSYIRKDRIVISGFSLGTE----P 238 (391)
T ss_dssp TSGGGCSSGGGTTTTSC-----CHHHHHHHHHHTTCCHHHHHHHHHHH-HHHHHHTCTTEEEEEEEEEEEGGGHH----H
T ss_pred CccccCCcccccccccc-----hHHHHHHHHHhcCCCHHHHHHHHHHH-HHHHHHhccCCCCCeEEEEEEChhHH----H
Confidence 00 0 00111111 111111 34433 34566777777677899999999995 3
Q ss_pred HHHHHHhccccccceeeeeeeEecccccc
Q 042005 211 AQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 211 A~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
|..+..... .++++++..++.+
T Consensus 239 al~~a~~~~-------~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 239 MMVLGVLDK-------DIYAFVYNDFLCQ 260 (391)
T ss_dssp HHHHHHHCT-------TCCEEEEESCBCC
T ss_pred HHHHHHcCC-------ceeEEEEccCCCC
Confidence 433333332 4677776665543
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=93.85 E-value=0.81 Score=42.92 Aligned_cols=119 Identities=14% Similarity=0.174 Sum_probs=65.2
Q ss_pred EeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhh----hhhcCCeEE-cCC--CCeeecCCCCCCCC
Q 042005 91 SGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGT----MMELGPFRV-NKD--GKTLYQNEYAWNKD 163 (432)
Q Consensus 91 sGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~----f~E~GP~~~-~~~--~~~l~~N~~SW~~~ 163 (432)
..+++++ +..++|.-.. +.|.||.+.|.||.+.. +.- |.+.| |++ -.| |...+..+- . .+
T Consensus 13 ~~~~~~~---g~~l~y~~~G------~g~~vvllHG~~~~~~~-w~~~~~~L~~~g-~~via~Dl~G~G~S~~~~-~-~~ 79 (328)
T 2cjp_A 13 HKMVAVN---GLNMHLAELG------EGPTILFIHGFPELWYS-WRHQMVYLAERG-YRAVAPDLRGYGDTTGAP-L-ND 79 (328)
T ss_dssp EEEEEET---TEEEEEEEEC------SSSEEEEECCTTCCGGG-GHHHHHHHHTTT-CEEEEECCTTSTTCBCCC-T-TC
T ss_pred eeEecCC---CcEEEEEEcC------CCCEEEEECCCCCchHH-HHHHHHHHHHCC-cEEEEECCCCCCCCCCcC-c-CC
Confidence 5666664 4678776442 24889999999998775 332 22333 332 222 211111110 0 00
Q ss_pred CcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 164 YKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 164 ~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
....+-++.++|+.++|... .. .-.+++|.|+|+|| .+|..+..+.. -.++++++.++.
T Consensus 80 ~~~~~~~~~a~dl~~~l~~l----~~-~~~~~~lvGhS~Gg----~ia~~~A~~~p------~~v~~lvl~~~~ 138 (328)
T 2cjp_A 80 PSKFSILHLVGDVVALLEAI----AP-NEEKVFVVAHDWGA----LIAWHLCLFRP------DKVKALVNLSVH 138 (328)
T ss_dssp GGGGSHHHHHHHHHHHHHHH----CT-TCSSEEEEEETHHH----HHHHHHHHHCG------GGEEEEEEESCC
T ss_pred cccccHHHHHHHHHHHHHHh----cC-CCCCeEEEEECHHH----HHHHHHHHhCh------hheeEEEEEccC
Confidence 00112345566666665543 10 13589999999999 56665555442 258888887753
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=93.64 E-value=0.041 Score=49.77 Aligned_cols=61 Identities=16% Similarity=0.088 Sum_probs=44.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||++.|+.|.+++. ..+.|.+.+ .+..+.++. +||+.+.++|+...+.+.+
T Consensus 179 ~~P~lvi~G~~D~~~~~-~~~~~~~~~------------------------~~~~~~~~~-~gH~~~~e~p~~~~~~i~~ 232 (242)
T 2k2q_B 179 QSPVHVFNGLDDKKCIR-DAEGWKKWA------------------------KDITFHQFD-GGHMFLLSQTEEVAERIFA 232 (242)
T ss_dssp CCSEEEEEECSSCCHHH-HHHHHHTTC------------------------CCSEEEEEE-CCCSHHHHHCHHHHHHHHH
T ss_pred CCCEEEEeeCCCCcCHH-HHHHHHHHh------------------------cCCeEEEEe-CCceeEcCCHHHHHHHHHH
Confidence 48999999999988652 233333221 122345665 5999999999999999999
Q ss_pred HHcCCCC
Q 042005 423 FINGTLP 429 (432)
Q Consensus 423 fl~~~~~ 429 (432)
|+...++
T Consensus 233 fl~~~~~ 239 (242)
T 2k2q_B 233 ILNQHPI 239 (242)
T ss_dssp HHHTTTS
T ss_pred HhhccCc
Confidence 9977654
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=93.40 E-value=0.44 Score=43.57 Aligned_cols=101 Identities=12% Similarity=0.102 Sum_probs=54.7
Q ss_pred CCCCCeEEEEcCCCChhhhhHh----hhhhcCCeEE-cCCCCeeecCCCCCCCCC--cccCChhhHHHHHHHHHHHHHHC
Q 042005 115 SSSKPLVLWLNGGPGFSSFGAG----TMMELGPFRV-NKDGKTLYQNEYAWNKDY--KVNGDIRTARDSYTFLVSWLARF 187 (432)
Q Consensus 115 p~~~PlilWlnGGPGcSSl~~G----~f~E~GP~~~-~~~~~~l~~N~~SW~~~~--~~~~~~~~a~d~~~fL~~F~~~f 187 (432)
+.+.|.||.+.|.++.+.. +. .|.+.| |++ ..|- .-+..+... ...+-++.|+|+.++| +..
T Consensus 7 ~~~g~~vvllHG~~~~~~~-w~~~~~~L~~~g-~~via~Dl-----~G~G~S~~~~~~~~~~~~~a~dl~~~l----~~l 75 (264)
T 2wfl_A 7 AKQQKHFVLVHGGCLGAWI-WYKLKPLLESAG-HKVTAVDL-----SAAGINPRRLDEIHTFRDYSEPLMEVM----ASI 75 (264)
T ss_dssp --CCCEEEEECCTTCCGGG-GTTHHHHHHHTT-CEEEEECC-----TTSTTCSCCGGGCCSHHHHHHHHHHHH----HHS
T ss_pred CCCCCeEEEECCCccccch-HHHHHHHHHhCC-CEEEEeec-----CCCCCCCCCcccccCHHHHHHHHHHHH----HHh
Confidence 4567899999999877764 33 333334 433 2221 111111100 0112334555555544 444
Q ss_pred CCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 188 PEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 188 P~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
. ...+++|.|+|+|| .+|..+..+.. -.++++++.++..
T Consensus 76 ~--~~~~~~lvGhSmGG----~va~~~a~~~p------~~v~~lvl~~~~~ 114 (264)
T 2wfl_A 76 P--PDEKVVLLGHSFGG----MSLGLAMETYP------EKISVAVFMSAMM 114 (264)
T ss_dssp C--TTCCEEEEEETTHH----HHHHHHHHHCG------GGEEEEEEESSCC
T ss_pred C--CCCCeEEEEeChHH----HHHHHHHHhCh------hhhceeEEEeecc
Confidence 2 12589999999999 45555554432 2578888887753
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=93.08 E-value=0.85 Score=44.96 Aligned_cols=38 Identities=11% Similarity=0.115 Sum_probs=25.2
Q ss_pred EecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhh
Q 042005 95 NVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSS 132 (432)
Q Consensus 95 ~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSS 132 (432)
.+....+..+..|++...+.....|+||++.|+.|...
T Consensus 96 ~~~~~~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~ 133 (398)
T 3nuz_A 96 EFYPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKE 133 (398)
T ss_dssp EECCSTTBCEEEEEEEESSCCSCEEEEEEECCTTCCHH
T ss_pred EEEcCCCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcc
Confidence 33333466787777754332456799999999977543
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=92.19 E-value=1.8 Score=40.06 Aligned_cols=51 Identities=16% Similarity=0.068 Sum_probs=34.7
Q ss_pred HHHHHHH-CCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 180 LVSWLAR-FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 180 L~~F~~~-fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
|..+++. ++ ....+++|+|.|+|| .+|..+..+.. -.++++++.+|..+..
T Consensus 99 l~~~i~~~~~-~~~~~~~l~G~S~GG----~~al~~a~~~p------~~~~~~v~~sg~~~~~ 150 (280)
T 1r88_A 99 LPDWLAANRG-LAPGGHAAVGAAQGG----YGAMALAAFHP------DRFGFAGSMSGFLYPS 150 (280)
T ss_dssp HHHHHHHHSC-CCSSCEEEEEETHHH----HHHHHHHHHCT------TTEEEEEEESCCCCTT
T ss_pred HHHHHHHHCC-CCCCceEEEEECHHH----HHHHHHHHhCc------cceeEEEEECCccCcC
Confidence 3344444 54 334589999999999 66666655542 2488999999987653
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.13 E-value=0.14 Score=46.25 Aligned_cols=64 Identities=16% Similarity=0.213 Sum_probs=44.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.++|....+.+.+.+.=. +|. ...-..+.+.++||+++.++ ...+.+.+
T Consensus 172 ~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~--------------~g~---~~~~~~~~~~~~gH~~~~~~--~~~~~i~~ 232 (243)
T 1ycd_A 172 KTKMIFIYGASDQAVPSVRSKYLYDIYLKA--------------QNG---NKEKVLAYEHPGGHMVPNKK--DIIRPIVE 232 (243)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHHHHH--------------TTT---CTTTEEEEEESSSSSCCCCH--HHHHHHHH
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHHhhhh--------------ccc---cccccEEEecCCCCcCCchH--HHHHHHHH
Confidence 589999999999999998888877665300 000 00013357889999998764 46677777
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 233 fl~ 235 (243)
T 1ycd_A 233 QIT 235 (243)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=92.02 E-value=0.8 Score=43.19 Aligned_cols=117 Identities=10% Similarity=-0.019 Sum_probs=60.9
Q ss_pred eEEEEEE-EcCCC-CCCCCeEEEEcCCCChhhh--------h--HhhhhhcC---CeEE-cCCCCeeecCCCCCCCCCcc
Q 042005 103 SLFYYFV-ESPQN-SSSKPLVLWLNGGPGFSSF--------G--AGTMMELG---PFRV-NKDGKTLYQNEYAWNKDYKV 166 (432)
Q Consensus 103 ~lFywf~-es~~~-p~~~PlilWlnGGPGcSSl--------~--~G~f~E~G---P~~~-~~~~~~l~~N~~SW~~~~~~ 166 (432)
.+-++.+ +..-+ .+..|+|++|.||+|.... . .-.+.+.| |+.+ ..+... .+ +...
T Consensus 52 ~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~-----~~---~~~~ 123 (297)
T 1gkl_A 52 TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNG-----GN---CTAQ 123 (297)
T ss_dssp EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCS-----TT---CCTT
T ss_pred EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcC-----Cc---cchH
Confidence 4555544 33222 3567999999999985321 0 12344556 6654 333210 00 0000
Q ss_pred cCChhhHHHHHHHHHHHHHHCCCC-----------CCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecc
Q 042005 167 NGDIRTARDSYTFLVSWLARFPEY-----------KTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGN 235 (432)
Q Consensus 167 ~~~~~~a~d~~~fL~~F~~~fP~~-----------~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGN 235 (432)
.-.+..++++..++.+ .++.+ ....+.|+|.|+|| .+|..+..+.. -.+++++..+
T Consensus 124 ~~~~~~~~~l~~~i~~---~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG----~~al~~a~~~p------~~f~~~v~~s 190 (297)
T 1gkl_A 124 NFYQEFRQNVIPFVES---KYSTYAESTTPQGIAASRMHRGFGGFAMGG----LTTWYVMVNCL------DYVAYFMPLS 190 (297)
T ss_dssp THHHHHHHTHHHHHHH---HSCSSCSSCSHHHHHTTGGGEEEEEETHHH----HHHHHHHHHHT------TTCCEEEEES
T ss_pred HHHHHHHHHHHHHHHH---hCCccccccccccccCCccceEEEEECHHH----HHHHHHHHhCc------hhhheeeEec
Confidence 0011233444444443 34433 23459999999999 55655544432 1477888888
Q ss_pred ccccc
Q 042005 236 ALIDL 240 (432)
Q Consensus 236 g~idp 240 (432)
|....
T Consensus 191 g~~~~ 195 (297)
T 1gkl_A 191 GDYWY 195 (297)
T ss_dssp CCCCB
T ss_pred ccccc
Confidence 76543
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=91.75 E-value=1.3 Score=41.67 Aligned_cols=54 Identities=15% Similarity=0.036 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 174 RDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 174 ~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
+++..++++- ++ ....+++|+|.|+|| .+|..+..+.. -.++++++.+|.+++.
T Consensus 104 ~~l~~~i~~~---~~-~~~~~~~l~G~S~GG----~~al~~a~~~p------~~~~~~v~~sg~~~~~ 157 (304)
T 1sfr_A 104 SELPGWLQAN---RH-VKPTGSAVVGLSMAA----SSALTLAIYHP------QQFVYAGAMSGLLDPS 157 (304)
T ss_dssp THHHHHHHHH---HC-BCSSSEEEEEETHHH----HHHHHHHHHCT------TTEEEEEEESCCSCTT
T ss_pred HHHHHHHHHH---CC-CCCCceEEEEECHHH----HHHHHHHHhCc------cceeEEEEECCccCcc
Confidence 4444444432 32 333489999999999 66666655542 2588999999987654
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=91.62 E-value=1.2 Score=41.44 Aligned_cols=118 Identities=13% Similarity=0.157 Sum_probs=63.4
Q ss_pred EeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhh-cCC-eEE---cCCCCeeecCCCCCCCCCc
Q 042005 91 SGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMME-LGP-FRV---NKDGKTLYQNEYAWNKDYK 165 (432)
Q Consensus 91 sGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E-~GP-~~~---~~~~~~l~~N~~SW~~~~~ 165 (432)
+-+++++ +..++|.-.. +.|.||.|.|.|+.+.. +.-+.+ ... +++ +--|...+..+-.-. ...
T Consensus 7 ~~~~~~~---~~~~~~~~~g------~g~~~vllHG~~~~~~~-w~~~~~~l~~~~~vi~~Dl~G~G~s~~~~~~~-~~~ 75 (291)
T 3qyj_A 7 QTIVDTT---EARINLVKAG------HGAPLLLLHGYPQTHVM-WHKIAPLLANNFTVVATDLRGYGDSSRPASVP-HHI 75 (291)
T ss_dssp EEEEECS---SCEEEEEEEC------CSSEEEEECCTTCCGGG-GTTTHHHHTTTSEEEEECCTTSTTSCCCCCCG-GGG
T ss_pred eeEEecC---CeEEEEEEcC------CCCeEEEECCCCCCHHH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCc-ccc
Confidence 4466664 4678876432 34678899999998876 443222 211 433 211211111110000 000
Q ss_pred ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccc
Q 042005 166 VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNA 236 (432)
Q Consensus 166 ~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 236 (432)
..+.+..++++..++. .. ...+++|+|+|+|| .+|..+..+.. -.++++++.++
T Consensus 76 ~~~~~~~~~~~~~~~~----~l---~~~~~~l~GhS~Gg----~ia~~~a~~~p------~~v~~lvl~~~ 129 (291)
T 3qyj_A 76 NYSKRVMAQDQVEVMS----KL---GYEQFYVVGHDRGA----RVAHRLALDHP------HRVKKLALLDI 129 (291)
T ss_dssp GGSHHHHHHHHHHHHH----HT---TCSSEEEEEETHHH----HHHHHHHHHCT------TTEEEEEEESC
T ss_pred ccCHHHHHHHHHHHHH----Hc---CCCCEEEEEEChHH----HHHHHHHHhCc------hhccEEEEECC
Confidence 1233445555555444 33 34589999999999 56666655542 25788888764
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=91.58 E-value=1.2 Score=40.87 Aligned_cols=99 Identities=8% Similarity=-0.003 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCCChhhhhHh----hhhhcCCeEE-cCCCCeeecCCCCCCCCC--cccCChhhHHHHHHHHHHHHHHCCC
Q 042005 117 SKPLVLWLNGGPGFSSFGAG----TMMELGPFRV-NKDGKTLYQNEYAWNKDY--KVNGDIRTARDSYTFLVSWLARFPE 189 (432)
Q Consensus 117 ~~PlilWlnGGPGcSSl~~G----~f~E~GP~~~-~~~~~~l~~N~~SW~~~~--~~~~~~~~a~d~~~fL~~F~~~fP~ 189 (432)
+.|.||.+-|.++.+.. +. .|.+.| |++ ..|- .-+..+... ...+-++.|+++ ..+++...
T Consensus 3 ~~~~vvllHG~~~~~~~-w~~~~~~L~~~g-~rVia~Dl-----~G~G~S~~~~~~~~~~~~~a~dl----~~~l~~l~- 70 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWS-WYKLKPLLEAAG-HKVTALDL-----AASGTDLRKIEELRTLYDYTLPL----MELMESLS- 70 (273)
T ss_dssp CCCEEEEECCTTCCGGG-GTTHHHHHHHTT-CEEEECCC-----TTSTTCCCCGGGCCSHHHHHHHH----HHHHHTSC-
T ss_pred CCCeEEEECCCCCCcch-HHHHHHHHHhCC-CEEEEecC-----CCCCCCccCcccccCHHHHHHHH----HHHHHHhc-
Confidence 45789999999877754 33 233334 443 2221 111111100 001233445554 44554432
Q ss_pred CCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 190 YKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 190 ~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
...+++|.|+|+||. +|..+..+.. -.++++++.++..
T Consensus 71 -~~~~~~lvGhSmGG~----va~~~a~~~P------~~v~~lvl~~~~~ 108 (273)
T 1xkl_A 71 -ADEKVILVGHSLGGM----NLGLAMEKYP------QKIYAAVFLAAFM 108 (273)
T ss_dssp -SSSCEEEEEETTHHH----HHHHHHHHCG------GGEEEEEEESCCC
T ss_pred -cCCCEEEEecCHHHH----HHHHHHHhCh------HhheEEEEEeccC
Confidence 135899999999994 5555554432 2588999888753
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=91.51 E-value=0.97 Score=42.73 Aligned_cols=124 Identities=11% Similarity=0.141 Sum_probs=66.9
Q ss_pred EeeEEecCCCCceEEEEEEEcCC-CCCCCCeEEEEcCCCChhhhhHhhh----hhcCCeE--EcCCCC-eeecCCCCCCC
Q 042005 91 SGYVNVDSQDGRSLFYYFVESPQ-NSSSKPLVLWLNGGPGFSSFGAGTM----MELGPFR--VNKDGK-TLYQNEYAWNK 162 (432)
Q Consensus 91 sGyl~v~~~~~~~lFywf~es~~-~p~~~PlilWlnGGPGcSSl~~G~f----~E~GP~~--~~~~~~-~l~~N~~SW~~ 162 (432)
..++++. .+..++||.+.... .+...|.||.+.|-.+.+.. +.-+ .+.|=-. ++.-|. ..+..+ . .
T Consensus 9 ~~~i~~~--dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~-~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~--~-~ 82 (305)
T 1tht_A 9 AHVLRVN--NGQELHVWETPPKENVPFKNNTILIASGFARRMDH-FAGLAEYLSTNGFHVFRYDSLHHVGLSSGS--I-D 82 (305)
T ss_dssp EEEEEET--TTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGG-GHHHHHHHHTTTCCEEEECCCBCC-----------
T ss_pred EEEEEcC--CCCEEEEEEecCcccCCCCCCEEEEecCCccCchH-HHHHHHHHHHCCCEEEEeeCCCCCCCCCCc--c-c
Confidence 4466664 35789999885433 23457899999998776655 3433 3334211 221111 111100 0 0
Q ss_pred CCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 163 DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 163 ~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
++ +-+..++|+..+ .++++.. ...+++|.|+|+|| .+|..+..+ . .++++++.+|..+
T Consensus 83 ~~---~~~~~~~D~~~~-~~~l~~~---~~~~~~lvGhSmGG----~iA~~~A~~-------~-~v~~lvl~~~~~~ 140 (305)
T 1tht_A 83 EF---TMTTGKNSLCTV-YHWLQTK---GTQNIGLIAASLSA----RVAYEVISD-------L-ELSFLITAVGVVN 140 (305)
T ss_dssp CC---CHHHHHHHHHHH-HHHHHHT---TCCCEEEEEETHHH----HHHHHHTTT-------S-CCSEEEEESCCSC
T ss_pred ce---ehHHHHHHHHHH-HHHHHhC---CCCceEEEEECHHH----HHHHHHhCc-------c-CcCEEEEecCchh
Confidence 11 223445555433 3344433 23589999999999 555554322 2 5788888877654
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=91.49 E-value=0.11 Score=53.35 Aligned_cols=110 Identities=16% Similarity=0.247 Sum_probs=54.3
Q ss_pred CCCCeEEEEcCCC---Chhhh---hHhhhhhcCCeEEc-CCCCeeecCCCCCCC--CCc--ccCChhhHHHHH---HHHH
Q 042005 116 SSKPLVLWLNGGP---GFSSF---GAGTMMELGPFRVN-KDGKTLYQNEYAWNK--DYK--VNGDIRTARDSY---TFLV 181 (432)
Q Consensus 116 ~~~PlilWlnGGP---GcSSl---~~G~f~E~GP~~~~-~~~~~l~~N~~SW~~--~~~--~~~~~~~a~d~~---~fL~ 181 (432)
...|+|||+-||+ |.++. ....|.+.|.+.+- .+ .++ .+..+-. ... .... ..-.|.. ++++
T Consensus 95 ~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~n-YRl--g~~Gf~~~~~~~~~~~~n-~gl~D~~~al~wv~ 170 (489)
T 1qe3_A 95 QNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLN-YRL--GPFGFLHLSSFDEAYSDN-LGLLDQAAALKWVR 170 (489)
T ss_dssp CSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEEC-CCC--HHHHSCCCTTTCTTSCSC-HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecC-ccC--cccccCccccccccCCCC-cchHHHHHHHHHHH
Confidence 3479999999998 54432 11345555655432 11 111 1111111 100 0111 1123333 3333
Q ss_pred HHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 182 SWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 182 ~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
+-...|. -...++.|+|+|+|| .++..++..... .--++++++.+|..
T Consensus 171 ~~i~~fg-gDp~~V~l~G~SaGg----~~~~~~~~~~~~----~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 171 ENISAFG-GDPDNVTVFGESAGG----MSIAALLAMPAA----KGLFQKAIMESGAS 218 (489)
T ss_dssp HHGGGGT-EEEEEEEEEEETHHH----HHHHHHTTCGGG----TTSCSEEEEESCCC
T ss_pred HHHHHhC-CCcceeEEEEechHH----HHHHHHHhCccc----cchHHHHHHhCCCC
Confidence 3333331 234579999999999 455554443211 12378888888876
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=91.07 E-value=0.22 Score=48.12 Aligned_cols=52 Identities=23% Similarity=0.362 Sum_probs=41.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccC
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQ 412 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dq 412 (432)
..+|||++|+.|.+||+..+++..+.|+=.+. -.+..++++.++||.++...
T Consensus 90 ~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~------------------~~~ve~~~~~g~gH~~~~~~ 141 (318)
T 2d81_A 90 QRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDN------------------SANVSYVTTTGAVHTFPTDF 141 (318)
T ss_dssp GCEEEEEEETTCCSSCHHHHHHHHHHHTTTSC------------------GGGEEEEEETTCCSSEEESS
T ss_pred CCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCC------------------CcceEEEEeCCCCCCCccCC
Confidence 36999999999999999999999988751110 02578899999999986554
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=90.94 E-value=0.95 Score=43.39 Aligned_cols=59 Identities=15% Similarity=0.119 Sum_probs=37.7
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
..+.|+..++..+.+. +...+++|.|+|+|| .+|..+..+.. ..-.++++++.+|..++
T Consensus 89 ~~~~d~~~~~~~l~~~---l~~~~~~LvGhSmGG----~iAl~~A~~~~----~p~rV~~lVL~~~~~~~ 147 (335)
T 2q0x_A 89 HDAEDVDDLIGILLRD---HCMNEVALFATSTGT----QLVFELLENSA----HKSSITRVILHGVVCDP 147 (335)
T ss_dssp HHHHHHHHHHHHHHHH---SCCCCEEEEEEGGGH----HHHHHHHHHCT----TGGGEEEEEEEEECCCT
T ss_pred CcHHHHHHHHHHHHHH---cCCCcEEEEEECHhH----HHHHHHHHhcc----chhceeEEEEECCcccc
Confidence 3456666666555443 334689999999999 56665554210 01258999998876544
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=90.56 E-value=1.9 Score=39.76 Aligned_cols=39 Identities=13% Similarity=-0.009 Sum_probs=30.1
Q ss_pred CCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 193 RDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 193 ~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
.+++|+|.|+|| .+|..+..+.. -.++++++.+|.+++.
T Consensus 114 ~~~~l~G~S~GG----~~al~~a~~~p------~~~~~~v~~sg~~~~~ 152 (280)
T 1dqz_A 114 TGNAAVGLSMSG----GSALILAAYYP------QQFPYAASLSGFLNPS 152 (280)
T ss_dssp SSCEEEEETHHH----HHHHHHHHHCT------TTCSEEEEESCCCCTT
T ss_pred CceEEEEECHHH----HHHHHHHHhCC------chheEEEEecCccccc
Confidence 489999999999 66766665542 2489999999988764
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=90.07 E-value=1.3 Score=41.40 Aligned_cols=122 Identities=17% Similarity=0.216 Sum_probs=66.4
Q ss_pred EeeEEecCCCC-ceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhh----hhh-cCCeEE---cCCCCeeecCCCCCC
Q 042005 91 SGYVNVDSQDG-RSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGT----MME-LGPFRV---NKDGKTLYQNEYAWN 161 (432)
Q Consensus 91 sGyl~v~~~~~-~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~----f~E-~GP~~~---~~~~~~l~~N~~SW~ 161 (432)
+.++.++...+ ..+.|+-.. ...|.||.|.|+++++.. +.- |.+ .+ |++ +--|...+..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~g-----~~~p~lvllHG~~~~~~~-w~~~~~~L~~~~~-~~via~Dl~GhG~S~~~---- 83 (316)
T 3c5v_A 15 MEDVEVENETGKDTFRVYKSG-----SEGPVLLLLHGGGHSALS-WAVFTAAIISRVQ-CRIVALDLRSHGETKVK---- 83 (316)
T ss_dssp EEEEEEEETTEEEEEEEEEEC-----SSSCEEEEECCTTCCGGG-GHHHHHHHHTTBC-CEEEEECCTTSTTCBCS----
T ss_pred cceEEecCCcceEEEEEEecC-----CCCcEEEEECCCCccccc-HHHHHHHHhhcCC-eEEEEecCCCCCCCCCC----
Confidence 45666653210 245555432 245889999999877764 332 222 13 543 21111111100
Q ss_pred CCCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 162 KDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 162 ~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
... ..+-++.|+|+..++....... ..+++|+|+|+|| .+|..+..+.. .+ .++++++.++.
T Consensus 84 ~~~-~~~~~~~a~dl~~~l~~l~~~~----~~~~~lvGhSmGG----~ia~~~A~~~~---~p--~v~~lvl~~~~ 145 (316)
T 3c5v_A 84 NPE-DLSAETMAKDVGNVVEAMYGDL----PPPIMLIGHSMGG----AIAVHTASSNL---VP--SLLGLCMIDVV 145 (316)
T ss_dssp CTT-CCCHHHHHHHHHHHHHHHHTTC----CCCEEEEEETHHH----HHHHHHHHTTC---CT--TEEEEEEESCC
T ss_pred Ccc-ccCHHHHHHHHHHHHHHHhccC----CCCeEEEEECHHH----HHHHHHHhhcc---CC--CcceEEEEccc
Confidence 000 1234567888877777653211 1579999999999 56666655421 11 38899887764
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=90.02 E-value=2.6 Score=41.82 Aligned_cols=56 Identities=16% Similarity=0.087 Sum_probs=43.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecc-eEEEEEcCCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQN-LTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~n-LTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
.+++++..|..|.+.+. +.|.+.. .+ ..+..+.++||++++++|+...+.|+
T Consensus 338 ~vPt~v~~~~~D~~~~p---~~~~~~~------------------------~~~~~~~~~~~gGHf~~lE~Pe~~~~~l~ 390 (408)
T 3g02_A 338 HKPFGFSFFPKDLVPVP---RSWIATT------------------------GNLVFFRDHAEGGHFAALERPRELKTDLT 390 (408)
T ss_dssp EEEEEEEECTBSSSCCC---HHHHGGG------------------------EEEEEEEECSSCBSCHHHHCHHHHHHHHH
T ss_pred CCCEEEEeCCcccccCc---HHHHHhc------------------------CCeeEEEECCCCcCchhhhCHHHHHHHHH
Confidence 48999999999976554 3455442 12 34567788999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 391 ~fl~ 394 (408)
T 3g02_A 391 AFVE 394 (408)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9985
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=89.97 E-value=1.5 Score=39.87 Aligned_cols=100 Identities=13% Similarity=0.071 Sum_probs=51.5
Q ss_pred CCeEEEEcCCCChhhhhHhhhhh-cCC-eEE-cCC--CCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCC
Q 042005 118 KPLVLWLNGGPGFSSFGAGTMME-LGP-FRV-NKD--GKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKT 192 (432)
Q Consensus 118 ~PlilWlnGGPGcSSl~~G~f~E-~GP-~~~-~~~--~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~ 192 (432)
+|.||.+.|.++.+.. +.-+.+ ... +++ ..| |...+..+ .+... ...+-++.++|+.++++ .. ..
T Consensus 20 ~~~vvllHG~~~~~~~-w~~~~~~L~~~~~vi~~Dl~G~G~S~~~-~~~~~-~~~~~~~~a~dl~~~l~----~l---~~ 89 (271)
T 1wom_A 20 KASIMFAPGFGCDQSV-WNAVAPAFEEDHRVILFDYVGSGHSDLR-AYDLN-RYQTLDGYAQDVLDVCE----AL---DL 89 (271)
T ss_dssp SSEEEEECCTTCCGGG-GTTTGGGGTTTSEEEECCCSCCSSSCCT-TCCTT-GGGSHHHHHHHHHHHHH----HT---TC
T ss_pred CCcEEEEcCCCCchhh-HHHHHHHHHhcCeEEEECCCCCCCCCCC-ccccc-ccccHHHHHHHHHHHHH----Hc---CC
Confidence 4889999998777665 443322 211 443 112 11111000 00000 00122345566555544 33 33
Q ss_pred CCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 193 RDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 193 ~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
.+++|.|+|+||. +|..+..+.. -.++++++.++.
T Consensus 90 ~~~~lvGhS~GG~----va~~~a~~~p------~~v~~lvl~~~~ 124 (271)
T 1wom_A 90 KETVFVGHSVGAL----IGMLASIRRP------ELFSHLVMVGPS 124 (271)
T ss_dssp SCEEEEEETHHHH----HHHHHHHHCG------GGEEEEEEESCC
T ss_pred CCeEEEEeCHHHH----HHHHHHHhCH------HhhcceEEEcCC
Confidence 6899999999994 5554444432 247888887764
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=89.88 E-value=0.4 Score=44.19 Aligned_cols=59 Identities=27% Similarity=0.309 Sum_probs=45.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
+.+|++.+|+.|.++|....++..+.|+= .| -+.+|.+..|+||.++. +.++.+.+
T Consensus 183 ~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~---------------~g-----~~v~~~~y~g~gH~i~~----~~l~~~~~ 238 (246)
T 4f21_A 183 GLPILVCHGTDDQVLPEVLGHDLSDKLKV---------------SG-----FANEYKHYVGMQHSVCM----EEIKDISN 238 (246)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHT---------------TT-----CCEEEEEESSCCSSCCH----HHHHHHHH
T ss_pred CCchhhcccCCCCccCHHHHHHHHHHHHH---------------CC-----CCeEEEEECCCCCccCH----HHHHHHHH
Confidence 58999999999999999988888877641 11 14677888999999863 34566777
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
||.
T Consensus 239 fL~ 241 (246)
T 4f21_A 239 FIA 241 (246)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=89.44 E-value=1.1 Score=44.19 Aligned_cols=64 Identities=9% Similarity=0.130 Sum_probs=45.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcC--Cccccccc-ChHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRG--AGHFVPSY-QPARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~--AGHmvP~d-qP~~a~~m 419 (432)
..+|||++|..|.++|...+++..+.+.= .| . .++.++.+ ++|+.... --..+++-
T Consensus 307 ~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~---------------~G-----~-v~~~~~~~~~~~H~~~~~~~~~~~~~w 365 (377)
T 4ezi_A 307 TAPLLLVGTKGDRDVPYAGAEMAYHSFRK---------------YS-----D-FVWIKSVSDALDHVQAHPFVLKEQVDF 365 (377)
T ss_dssp SSCEEEEECTTCSSSCHHHHHHHHHHHHT---------------TC-----S-CEEEEESCSSCCTTTTHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHh---------------cC-----C-EEEEEcCCCCCCccChHHHHHHHHHHH
Confidence 47999999999999999999998888640 01 2 57788888 99987643 22345556
Q ss_pred HHHHHcCC
Q 042005 420 FSSFINGT 427 (432)
Q Consensus 420 ~~~fl~~~ 427 (432)
|++++.++
T Consensus 366 l~~~~~~~ 373 (377)
T 4ezi_A 366 FKQFERQE 373 (377)
T ss_dssp HHHHHTSS
T ss_pred HHHhhcch
Confidence 66666543
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=89.24 E-value=0.21 Score=44.67 Aligned_cols=60 Identities=15% Similarity=0.160 Sum_probs=43.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcc--cccccChHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGH--FVPSYQPARALVLF 420 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGH--mvP~dqP~~a~~m~ 420 (432)
..+|+++.|+.|.+++. .. ..|.... -+++++..|.| || |...++|+...+.+
T Consensus 168 ~~P~l~i~g~~D~~~~~-~~------------~~w~~~~-----------~~~~~~~~i~g-~H~~~~~~~~~~~~~~~i 222 (230)
T 1jmk_C 168 KADIDLLTSGADFDIPE-WL------------ASWEEAT-----------TGAYRMKRGFG-THAEMLQGETLDRNAGIL 222 (230)
T ss_dssp SSEEEEEECSSCCCCCT-TE------------ECSGGGB-----------SSCEEEEECSS-CGGGTTSHHHHHHHHHHH
T ss_pred cccEEEEEeCCCCCCcc-cc------------chHHHhc-----------CCCeEEEEecC-ChHHHcCcHhHHHHHHHH
Confidence 47999999999998762 10 1121110 13567788887 99 99999999999999
Q ss_pred HHHHcCC
Q 042005 421 SSFINGT 427 (432)
Q Consensus 421 ~~fl~~~ 427 (432)
.+|+.+.
T Consensus 223 ~~~l~~~ 229 (230)
T 1jmk_C 223 LEFLNTQ 229 (230)
T ss_dssp HHHHTCB
T ss_pred HHHHhhc
Confidence 9999653
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=89.20 E-value=0.36 Score=42.07 Aligned_cols=54 Identities=11% Similarity=0.080 Sum_probs=41.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||.+|+.|.+||+.-+++.. ++-.+.++.|+||.. ..++..++.|.+
T Consensus 137 ~~P~LiihG~~D~~Vp~~~s~~l~---------------------------~~~~l~i~~g~~H~~--~~~~~~~~~I~~ 187 (202)
T 4fle_A 137 PDLLWLLQQTGDEVLDYRQAVAYY---------------------------TPCRQTVESGGNHAF--VGFDHYFSPIVT 187 (202)
T ss_dssp GGGEEEEEETTCSSSCHHHHHHHT---------------------------TTSEEEEESSCCTTC--TTGGGGHHHHHH
T ss_pred CceEEEEEeCCCCCCCHHHHHHHh---------------------------hCCEEEEECCCCcCC--CCHHHHHHHHHH
Confidence 369999999999999996654432 123468899999963 456677888899
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
||+
T Consensus 188 FL~ 190 (202)
T 4fle_A 188 FLG 190 (202)
T ss_dssp HHT
T ss_pred HHh
Confidence 995
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=89.14 E-value=2 Score=38.86 Aligned_cols=98 Identities=11% Similarity=0.057 Sum_probs=51.9
Q ss_pred CCeEEEEcCCCChhhhhH----hhhhhcCCeEE-cCCCCeeecCCCCCCCCCc--ccCChhhHHHHHHHHHHHHHHCCCC
Q 042005 118 KPLVLWLNGGPGFSSFGA----GTMMELGPFRV-NKDGKTLYQNEYAWNKDYK--VNGDIRTARDSYTFLVSWLARFPEY 190 (432)
Q Consensus 118 ~PlilWlnGGPGcSSl~~----G~f~E~GP~~~-~~~~~~l~~N~~SW~~~~~--~~~~~~~a~d~~~fL~~F~~~fP~~ 190 (432)
.|.||.+.|.++.+.. + -.|.+.| |++ ..|- .-+..+.... ..+-++.++|+ ..|++...
T Consensus 3 ~~~vvllHG~~~~~~~-w~~~~~~L~~~g-~~via~Dl-----~G~G~S~~~~~~~~~~~~~a~dl----~~~l~~l~-- 69 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWI-WHKLKPLLEALG-HKVTALDL-----AASGVDPRQIEEIGSFDEYSEPL----LTFLEALP-- 69 (257)
T ss_dssp CCEEEEECCTTCCGGG-GTTHHHHHHHTT-CEEEEECC-----TTSTTCSCCGGGCCSHHHHTHHH----HHHHHTSC--
T ss_pred CCcEEEEcCCccCcCC-HHHHHHHHHhCC-CEEEEeCC-----CCCCCCCCCcccccCHHHHHHHH----HHHHHhcc--
Confidence 4678999999866654 3 3344445 543 2221 1111111000 01223444444 44554432
Q ss_pred CCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 191 KTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 191 ~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
...+++|.|+|+||. +|..+..+.. -.++++++.++..
T Consensus 70 ~~~~~~lvGhSmGG~----va~~~a~~~p------~~v~~lVl~~~~~ 107 (257)
T 3c6x_A 70 PGEKVILVGESCGGL----NIAIAADKYC------EKIAAAVFHNSVL 107 (257)
T ss_dssp TTCCEEEEEEETHHH----HHHHHHHHHG------GGEEEEEEEEECC
T ss_pred ccCCeEEEEECcchH----HHHHHHHhCc------hhhheEEEEeccc
Confidence 135899999999995 5555544432 2578888877753
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=87.23 E-value=0.46 Score=48.74 Aligned_cols=114 Identities=18% Similarity=0.193 Sum_probs=56.4
Q ss_pred CCCCCeEEEEcCCC---Chhhhh---HhhhhhcCCeEEcCCCCeeecCCCCCCC--CCc----ccCChhhHHHHHHHH--
Q 042005 115 SSSKPLVLWLNGGP---GFSSFG---AGTMMELGPFRVNKDGKTLYQNEYAWNK--DYK----VNGDIRTARDSYTFL-- 180 (432)
Q Consensus 115 p~~~PlilWlnGGP---GcSSl~---~G~f~E~GP~~~~~~~~~l~~N~~SW~~--~~~----~~~~~~~a~d~~~fL-- 180 (432)
.+..|+|||+-||+ |.++.. ...|.+.|.+.+-.=..++ .+..+-. +.. ...-...-.|...+|
T Consensus 96 ~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRl--g~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~w 173 (498)
T 2ogt_A 96 GKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRM--NVFGFLHLGDSFGEAYAQAGNLGILDQVAALRW 173 (498)
T ss_dssp SCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCC--HHHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHH
T ss_pred CCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcC--chhhccCchhhccccccCCCCcccHHHHHHHHH
Confidence 35679999999999 655431 1345566665542111111 1111111 100 000011223433333
Q ss_pred -HHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 181 -VSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 181 -~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
++-...| .-...++.|+|||.||. ++..++..... .--++++++-+|..+
T Consensus 174 v~~~i~~f-ggdp~~V~l~G~SaGg~----~~~~~~~~~~~----~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 174 VKENIAAF-GGDPDNITIFGESAGAA----SVGVLLSLPEA----SGLFRRAMLQSGSGS 224 (498)
T ss_dssp HHHHGGGG-TEEEEEEEEEEETHHHH----HHHHHHHCGGG----TTSCSEEEEESCCTT
T ss_pred HHHHHHHh-CCCCCeEEEEEECHHHH----HHHHHHhcccc----cchhheeeeccCCcc
Confidence 3332233 12245699999999994 44444443221 113788888888665
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=86.36 E-value=3.3 Score=38.60 Aligned_cols=94 Identities=11% Similarity=0.038 Sum_probs=53.6
Q ss_pred CCCCeEEEEcCCCChhh---------hhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHH
Q 042005 116 SSKPLVLWLNGGPGFSS---------FGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLAR 186 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSS---------l~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~ 186 (432)
.++|.||.+.|..|.+. + .-.|.+.|--.+..+-. . . ...+...+++.+.+.++.+.
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~-~~~L~~~G~~v~~~d~~-----g------~--g~s~~~~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGI-PSALRRDGAQVYVTEVS-----Q------L--DTSEVRGEQLLQQVEEIVAL 70 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTH-HHHHHHTTCCEEEECCC-----S------S--SCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEeCCCCCCccccccccHHHH-HHHHHhCCCEEEEEeCC-----C------C--CCchhhHHHHHHHHHHHHHH
Confidence 45788999999988653 2 12344444322211110 0 0 11223455566666666655
Q ss_pred CCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccc
Q 042005 187 FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNA 236 (432)
Q Consensus 187 fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 236 (432)
. ...+++|.|+|+||. +|..+..+.. -.++++++.++
T Consensus 71 ~---~~~~v~lvGhS~GG~----~a~~~a~~~p------~~v~~lv~i~~ 107 (285)
T 1ex9_A 71 S---GQPKVNLIGHSHGGP----TIRYVAAVRP------DLIASATSVGA 107 (285)
T ss_dssp H---CCSCEEEEEETTHHH----HHHHHHHHCG------GGEEEEEEESC
T ss_pred h---CCCCEEEEEECHhHH----HHHHHHHhCh------hheeEEEEECC
Confidence 4 236899999999994 4444444332 25788888776
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=86.12 E-value=1.9 Score=38.70 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=25.4
Q ss_pred CCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 193 RDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 193 ~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
.+++|.|+|+|| .+|..+..+.. -.++++++.++.
T Consensus 74 ~~~~lvGhS~Gg----~va~~~a~~~p------~~v~~lvl~~~~ 108 (258)
T 1m33_A 74 DKAIWLGWSLGG----LVASQIALTHP------ERVRALVTVASS 108 (258)
T ss_dssp SSEEEEEETHHH----HHHHHHHHHCG------GGEEEEEEESCC
T ss_pred CCeEEEEECHHH----HHHHHHHHHhh------HhhceEEEECCC
Confidence 689999999999 55555555442 258888887754
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=84.02 E-value=6.2 Score=37.63 Aligned_cols=98 Identities=9% Similarity=0.125 Sum_probs=55.1
Q ss_pred CCCCeEEEEcCCCChhhhh---------HhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHH
Q 042005 116 SSKPLVLWLNGGPGFSSFG---------AGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLAR 186 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~---------~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~ 186 (432)
.++|.||.+.|..|.+... .-.|.+.|--.+..+-. .+... ...+...+++.+.+.++.+.
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~-----g~g~s-----~~~~~~~~~l~~~i~~~l~~ 75 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLS-----GFQSD-----DGPNGRGEQLLAYVKTVLAA 75 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCC-----SSCCS-----SSTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCC-----CCCCC-----CCCCCCHHHHHHHHHHHHHH
Confidence 4578899999998876320 12344455333222211 11110 01123455666666666655
Q ss_pred CCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccc
Q 042005 187 FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNA 236 (432)
Q Consensus 187 fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 236 (432)
. ...+++|.|+|+||. +|..+..+.. -.++++++.++
T Consensus 76 ~---~~~~v~lvGHS~GG~----va~~~a~~~p------~~V~~lV~i~~ 112 (320)
T 1ys1_X 76 T---GATKVNLVGHSQGGL----TSRYVAAVAP------DLVASVTTIGT 112 (320)
T ss_dssp H---CCSCEEEEEETHHHH----HHHHHHHHCG------GGEEEEEEESC
T ss_pred h---CCCCEEEEEECHhHH----HHHHHHHhCh------hhceEEEEECC
Confidence 4 235899999999995 4444444432 25888888776
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=83.67 E-value=1 Score=42.07 Aligned_cols=60 Identities=12% Similarity=0.103 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
...+++..++++..+++|. .+++|+|+|-||-.+-.+|..+... ..+++.+..|.|.+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~---~~i~l~GHSLGGalA~l~a~~l~~~-------~~~~~~~tfg~P~vg~ 178 (269)
T 1tib_A 119 SVADTLRQKVEDAVREHPD---YRVVFTGHSLGGALATVAGADLRGN-------GYDIDVFSYGAPRVGN 178 (269)
T ss_dssp HHHHHHHHHHHHHHHHCTT---SEEEEEEETHHHHHHHHHHHHHTTS-------SSCEEEEEESCCCCBC
T ss_pred HHHHHHHHHHHHHHHHCCC---ceEEEecCChHHHHHHHHHHHHHhc-------CCCeEEEEeCCCCCCC
Confidence 4556777788887777875 5799999999995444443333211 2468899999988753
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=83.10 E-value=5.2 Score=41.86 Aligned_cols=125 Identities=22% Similarity=0.263 Sum_probs=66.8
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCCChh-----------h-hh-H-hhhhhcCCeEE--cCCCCeeecCCCCCCC-
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGPGFS-----------S-FG-A-GTMMELGPFRV--NKDGKTLYQNEYAWNK- 162 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGPGcS-----------S-l~-~-G~f~E~GP~~~--~~~~~~l~~N~~SW~~- 162 (432)
.+..|..+.+.... .+..|+||...|-.+.. + +. . -.|.+.|=-.+ +.-|..-+... +..
T Consensus 34 DG~~L~~~~~~P~~-~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g~--~~~~ 110 (615)
T 1mpx_A 34 DGVKLHTVIVLPKG-AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGD--YVMT 110 (615)
T ss_dssp TSCEEEEEEEEETT-CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSC--CCTT
T ss_pred CCCEEEEEEEeCCC-CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCCc--cccc
Confidence 46778888775433 24569999988643332 0 10 0 24566663333 22221111111 111
Q ss_pred -----CCcccCChhhHHHHHHHHHHHHHHC-CCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccc
Q 042005 163 -----DYKVNGDIRTARDSYTFLVSWLARF-PEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNA 236 (432)
Q Consensus 163 -----~~~~~~~~~~a~d~~~fL~~F~~~f-P~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 236 (432)
+|. ......++|+.+++. |+... |.- +.++.|+|.|||| .++..+.... .-.||+++...|
T Consensus 111 ~~~~~~~~-~~g~~~~~D~~~~i~-~l~~~~~~~-~~rv~l~G~S~GG----~~al~~a~~~------~~~l~a~v~~~~ 177 (615)
T 1mpx_A 111 RPLRGPLN-PSEVDHATDAWDTID-WLVKNVSES-NGKVGMIGSSYEG----FTVVMALTNP------HPALKVAVPESP 177 (615)
T ss_dssp CCCSBTTB-CSSCCHHHHHHHHHH-HHHHHCTTE-EEEEEEEEETHHH----HHHHHHHTSC------CTTEEEEEEESC
T ss_pred cccccccc-cccccHHHHHHHHHH-HHHhcCCCC-CCeEEEEecCHHH----HHHHHHhhcC------CCceEEEEecCC
Confidence 011 001144666665544 44333 533 3489999999999 5555554332 235999999999
Q ss_pred cccc
Q 042005 237 LIDL 240 (432)
Q Consensus 237 ~idp 240 (432)
..|.
T Consensus 178 ~~d~ 181 (615)
T 1mpx_A 178 MIDG 181 (615)
T ss_dssp CCCT
T ss_pred cccc
Confidence 9884
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=82.93 E-value=1.1 Score=44.71 Aligned_cols=114 Identities=14% Similarity=0.165 Sum_probs=62.8
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhh---HhhhhhcC-----CeEEc-CCCCeeecCCCCCCCCC---cccC
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFG---AGTMMELG-----PFRVN-KDGKTLYQNEYAWNKDY---KVNG 168 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~---~G~f~E~G-----P~~~~-~~~~~l~~N~~SW~~~~---~~~~ 168 (432)
+..++|....+.. .+.|.||.+.|.||++..- +..|.+.. .|++- .| ..-+..+... ...+
T Consensus 94 g~~i~~~~~~~~~--~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~~gf~vv~~D-----lpG~G~S~~~~~~~~~~ 166 (408)
T 3g02_A 94 GLTIHFAALFSER--EDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPS-----LPGYTFSSGPPLDKDFG 166 (408)
T ss_dssp TEEEEEEEECCSC--TTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEEC-----CTTSTTSCCSCSSSCCC
T ss_pred CEEEEEEEecCCC--CCCCeEEEECCCCCcHHHHHHHHHHHhcccccccCceEEEEEC-----CCCCCCCCCCCCCCCCC
Confidence 5789988876542 4567799999999987641 24455531 25542 11 1112221100 0123
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 169 DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 169 ~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
-++.|+++..++.. . .+. .++++.|+|+|| .+|..+..+.. .++|+.|..+.+
T Consensus 167 ~~~~a~~~~~l~~~----l-g~~-~~~~lvG~S~Gg----~ia~~~A~~~p-------~~~~~~l~~~~~ 219 (408)
T 3g02_A 167 LMDNARVVDQLMKD----L-GFG-SGYIIQGGDIGS----FVGRLLGVGFD-------ACKAVHLNFCNM 219 (408)
T ss_dssp HHHHHHHHHHHHHH----T-TCT-TCEEEEECTHHH----HHHHHHHHHCT-------TEEEEEESCCCC
T ss_pred HHHHHHHHHHHHHH----h-CCC-CCEEEeCCCchH----HHHHHHHHhCC-------CceEEEEeCCCC
Confidence 44566666555553 2 221 279999999999 45555544432 356666654433
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=81.90 E-value=4.8 Score=41.88 Aligned_cols=126 Identities=21% Similarity=0.179 Sum_probs=69.0
Q ss_pred ecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhh--H-----hhhhhcCCeEEcCC--CCeeecCCCCCCCCCcc
Q 042005 96 VDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFG--A-----GTMMELGPFRVNKD--GKTLYQNEYAWNKDYKV 166 (432)
Q Consensus 96 v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~--~-----G~f~E~GP~~~~~~--~~~l~~N~~SW~~~~~~ 166 (432)
+....|..|..+.+.... ....|+||...|.-+..... + -.|.+.|=-.+..| |..-+... + ..
T Consensus 14 i~~~DG~~L~~~~~~P~~-~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~--~----~~ 86 (587)
T 3i2k_A 14 VPMRDGVRLAVDLYRPDA-DGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGE--F----VP 86 (587)
T ss_dssp EECTTSCEEEEEEEEECC-SSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSC--C----CT
T ss_pred EECCCCCEEEEEEEECCC-CCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCc--c----cc
Confidence 333346778887765432 34679999987543333221 1 34556664333222 21111111 1 00
Q ss_pred cCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc-ccccc
Q 042005 167 NGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL-IDLET 242 (432)
Q Consensus 167 ~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~-idp~~ 242 (432)
-...++|..+++ +|+.+.|.. +.++.++|.|||| .++..+.... .-.||+++..+|. .|...
T Consensus 87 --~~~~~~D~~~~i-~~l~~~~~~-~~~v~l~G~S~GG----~~a~~~a~~~------~~~l~a~v~~~~~~~d~~~ 149 (587)
T 3i2k_A 87 --HVDDEADAEDTL-SWILEQAWC-DGNVGMFGVSYLG----VTQWQAAVSG------VGGLKAIAPSMASADLYRA 149 (587)
T ss_dssp --TTTHHHHHHHHH-HHHHHSTTE-EEEEEECEETHHH----HHHHHHHTTC------CTTEEEBCEESCCSCTCCC
T ss_pred --ccchhHHHHHHH-HHHHhCCCC-CCeEEEEeeCHHH----HHHHHHHhhC------CCccEEEEEeCCccccccc
Confidence 123456665443 466655533 3689999999999 4454444433 2368999999998 77543
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=81.63 E-value=1.5 Score=40.59 Aligned_cols=67 Identities=18% Similarity=0.354 Sum_probs=48.0
Q ss_pred CCeEEEEecC----CccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEc--CCcccccccChHHH
Q 042005 343 GIRIWVYSGD----TDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVR--GAGHFVPSYQPARA 416 (432)
Q Consensus 343 girVLIy~Gd----~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~--~AGHmvP~dqP~~a 416 (432)
+++|+++.|+ .|.++|...++..-..+. +... .++.+.|. +|+|+...++| ..
T Consensus 165 ~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~-------------~~~~-------~~~~~~v~g~~a~H~~l~e~~-~v 223 (250)
T 3lp5_A 165 SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQ-------------DQVK-------HFTEITVTGANTAHSDLPQNK-QI 223 (250)
T ss_dssp TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHT-------------TTSS-------EEEEEECTTTTBSSCCHHHHH-HH
T ss_pred CceEEEEEecCCCCCCceeeHHHHHHHHHHhc-------------cccc-------ceEEEEEeCCCCchhcchhCH-HH
Confidence 5899999999 899999987655322222 1111 23335555 58899999999 78
Q ss_pred HHHHHHHHcCCCCC
Q 042005 417 LVLFSSFINGTLPP 430 (432)
Q Consensus 417 ~~m~~~fl~~~~~~ 430 (432)
.+.+.+||...+.+
T Consensus 224 ~~~I~~FL~~~~~~ 237 (250)
T 3lp5_A 224 VSLIRQYLLAETMP 237 (250)
T ss_dssp HHHHHHHTSCCCCC
T ss_pred HHHHHHHHhccccC
Confidence 99999999876653
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=81.25 E-value=1.9 Score=40.23 Aligned_cols=62 Identities=13% Similarity=0.149 Sum_probs=40.7
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
...+++...|++..+++|. .+++++|+|-||-.+-.+|..++++... ....+++-+..|.|-
T Consensus 117 ~l~~~~~~~l~~~~~~~p~---~~i~~~GHSLGgalA~l~a~~l~~~~~~--~~~~~v~~~tfg~P~ 178 (269)
T 1tgl_A 117 EVQNELVATVLDQFKQYPS---YKVAVTGHSLGGATALLCALDLYQREEG--LSSSNLFLYTQGQPR 178 (269)
T ss_pred HHHHHHHHHHHHHHHHCCC---ceEEEEeeCHHHHHHHHHHHHHhhhhhc--cCCCCeEEEEeCCCc
Confidence 4566777778877777764 4699999999997777777666433221 112345666666653
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=80.11 E-value=2.2 Score=40.04 Aligned_cols=59 Identities=14% Similarity=0.070 Sum_probs=40.7
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceee-eeeeEecccccc
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIIN-LRGIAMGNALID 239 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~in-LkGi~IGNg~id 239 (432)
...+++..+|++..+++|. .+++|+|+|-||-.+-.+|..+.+. .++ ++-+..|.|-+.
T Consensus 118 ~~~~~~~~~l~~~~~~~p~---~~i~vtGHSLGGalA~l~a~~l~~~-------g~~~v~~~tfg~PrvG 177 (279)
T 1tia_A 118 LVRDDIIKELKEVVAQNPN---YELVVVGHSLGAAVATLAATDLRGK-------GYPSAKLYAYASPRVG 177 (279)
T ss_pred HHHHHHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHHhc-------CCCceeEEEeCCCCCc
Confidence 3455677777877777775 5799999999996666555555432 123 677777777653
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=80.10 E-value=2.3 Score=39.75 Aligned_cols=63 Identities=14% Similarity=0.218 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 172 TARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 172 ~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
..+++..++++..+++|. .+++|+|+|-||-.+-.+|..+..+... ....+++-+..|.|-+.
T Consensus 119 ~~~~~~~~l~~~~~~~~~---~~i~vtGHSLGGalA~l~a~~~~~~~~~--~~~~~v~~~tFg~Prvg 181 (269)
T 1lgy_A 119 VVNDYFPVVQEQLTAHPT---YKVIVTGHSLGGAQALLAGMDLYQREPR--LSPKNLSIFTVGGPRVG 181 (269)
T ss_dssp HHHHHHHHHHHHHHHCTT---CEEEEEEETHHHHHHHHHHHHHHHHCTT--CSTTTEEEEEESCCCCB
T ss_pred HHHHHHHHHHHHHHHCCC---CeEEEeccChHHHHHHHHHHHHHhhccc--cCCCCeEEEEecCCCcC
Confidence 455667778887777874 5799999999997776666666543221 12345677777877664
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 432 | ||||
| g1wht.1 | 409 | c.69.1.5 (A:,B:) Serine carboxypeptidase II {Wheat | 1e-107 | |
| g1gxs.1 | 425 | c.69.1.5 (A:,B:) Hydroxynitrile lyase {Sorghum (So | 3e-99 | |
| d1wpxa1 | 421 | c.69.1.5 (A:1-421) Serine carboxypeptidase II {Bak | 3e-78 | |
| d1ac5a_ | 483 | c.69.1.5 (A:) Serine carboxypeptidase II {Baker's | 4e-73 | |
| d1ivya_ | 452 | c.69.1.5 (A:) Human 'protective protein', HPP {Hum | 2e-58 | |
| d1ivya_ | 452 | c.69.1.5 (A:) Human 'protective protein', HPP {Hum | 6e-29 |
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 421 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 247 bits (630), Expect = 3e-78
Identities = 105/415 (25%), Positives = 156/415 (37%), Gaps = 78/415 (18%)
Query: 83 LGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELG 142
+ N QY+GY++V+ + + F++ ES + + P++LWLNGGPG SS G ELG
Sbjct: 10 IDPNVTQYTGYLDVEDE-DKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLT-GLFFELG 67
Query: 143 PFRVNKDGKTLYQNEYAWNK-------------------DYKVNGDIRTARDSYTFLVSW 183
P + D K + N Y+WN V+ + +D Y FL +
Sbjct: 68 PSSIGPDLKPIG-NPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELF 126
Query: 184 LARFPEY--KTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241
+FPEY K +DF IAGESYAGHYIP A IL NL + +GN L D
Sbjct: 127 FDQFPEYVNKGQDFHIAGESYAGHYIPVFASEIL----SHKDRNFNLTSVLIGNGLTDPL 182
Query: 242 TMMKGTVDFYWTHALMPDEIYHGLTSSYN--FASLNSSDKVCLEFIDQGDAAAGNIYS-- 297
T P + S+ + C + IY
Sbjct: 183 TQYNYYEPMACGEGGEPSVLPSEECSAMEDSLERCLGLIESCYDSQSVWSCVPATIYCNN 242
Query: 298 -------------YDIYAP-----LCNSSSKFNTEIAN------------------SGEI 321
YDI LC + + + N + +I
Sbjct: 243 AQLAPYQRTGRNVYDIRKDCEGGNLCYPTLQDIDDYLNQDYVKEAVGAEVDHYESCNFDI 302
Query: 322 NRNW---KDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAW- 377
NRN+ D + + +L+ + + I VY+GD D + L +
Sbjct: 303 NRNFLFAGDWMKPYHTAVTDLLNQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFA 362
Query: 378 ----YPWYTQ--GEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFING 426
W EV G Y++ T++ V GH VP P AL + + +I+G
Sbjct: 363 SQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPENALSMVNEWIHG 417
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} Length = 483 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Score = 235 bits (600), Expect = 4e-73
Identities = 96/460 (20%), Positives = 166/460 (36%), Gaps = 110/460 (23%)
Query: 76 ESLPGQPLGVN----FDQYSGYVNVDSQD-------GRSLFYYFVES--PQNSSSKPLVL 122
E LPG + ++G++ + S+D F++ + + +PL++
Sbjct: 12 ELLPGLSEVPDPSNIPQMHAGHIPLRSEDADEQDSSDLEYFFWKFTNNDSNGNVDRPLII 71
Query: 123 WLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK-------------------- 162
WLNGGPG SS G ++E GPFRVN DGK LY NE +W
Sbjct: 72 WLNGGPGCSSMD-GALVESGPFRVNSDGK-LYLNEGSWISKGDLLFIDQPTGTGFSVEQN 129
Query: 163 --------DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAI 214
+ + FL ++ FPE TR ++GESYAG YIP A AI
Sbjct: 130 KDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAI 189
Query: 215 LYNNQ--HANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHG-------- 264
L +N+ + +L+ + +GN ID T + F L+ + +
Sbjct: 190 LNHNKFSKIDGDTYDLKALLIGNGWIDPNTQSLSYLPFAMEKKLIDESNPNFKHLTNAHE 249
Query: 265 -----LTSSYNFASLNSSDKVCLEFID-----------QGDAAAGNIYSYDIYAPLCNSS 308
+ S+ + + S + C ++ +G A N+Y++++ +
Sbjct: 250 NCQNLINSASTDEAAHFSYQECENILNLLLSYTRESSQKGTADCLNMYNFNLKDSYPSCG 309
Query: 309 SKFNTEIAN---------------------------SGEINRNW-KDKPQTVLPIIQELM 340
+ +I+ + + + + ++ L+
Sbjct: 310 MNWPKDISFVSKFFSTPGVIDSLHLDSDKIDHWKECTNSVGTKLSNPISKPSIHLLPGLL 369
Query: 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKL------GTPVRTAWYPWYTQ-------GEVG 387
GI I +++GD D + L G + W + E
Sbjct: 370 ESGIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFS 429
Query: 388 GYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFINGT 427
GY +NLTFV+V A H VP + + + + N
Sbjct: 430 GYVKYDRNLTFVSVYNASHMVPFDKSLVSRGIVDIYSNDV 469
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} Length = 452 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Score = 196 bits (498), Expect = 2e-58
Identities = 85/267 (31%), Positives = 125/267 (46%), Gaps = 35/267 (13%)
Query: 71 DKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGF 130
D+D+I+ LPG +F QYSGY+ + L Y+FVES ++ + P+VLWLNGGPG
Sbjct: 3 DQDEIQRLPGLAKQPSFRQYSGYLKSS--GSKHLHYWFVESQKDPENSPVVLWLNGGPGC 60
Query: 131 SSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK--------------------DYKVNGDI 170
SS G + E GPF V DG TL N Y+WN + D
Sbjct: 61 SSLD-GLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDT 119
Query: 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRG 230
A+ ++ L + FPEYK F+ GESYAG YIP LA ++ +NL+G
Sbjct: 120 EVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVM------QDPSMNLQG 173
Query: 231 IAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFAS----LNSSDKVCLEFID 286
+A+GN L E V F + H L+ + ++ L + + ++ D C+ +
Sbjct: 174 LAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQ 233
Query: 287 QGDAAAGN--IYSYDIYAPLCNSSSKF 311
+ GN + Y++YAP
Sbjct: 234 EVARIVGNSGLNIYNLYAPCAGGVPSH 260
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} Length = 452 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (289), Expect = 6e-29
Identities = 62/361 (17%), Positives = 115/361 (31%), Gaps = 26/361 (7%)
Query: 81 QPLGVNFD--QYSGYVNVDSQDGRSLFYY---FVESPQNSSSKPLVLWLNGGPGFSSFGA 135
P GV F Y D++ +S F F + L L G S G
Sbjct: 100 SPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLT-----GESYAG- 153
Query: 136 GTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDF 195
+ V +D Q N + +S + +
Sbjct: 154 -IYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQND----NSLVYFAYYHGLLGNRLWSSL 208
Query: 196 FIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHA 255
S N I+ G+ + N + +
Sbjct: 209 QTHCCSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAPCAGGVPSHFRYEKDTV 268
Query: 256 LMPDE----IYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKF 311
++ D L ++ A L S DKV ++ AA + N +
Sbjct: 269 VVQDLGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQL 328
Query: 312 NTEIANSGEINRNWKDKPQTVLP-IIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLG 370
+ +N ++ +++ ++ L ++ +I +Y+GD D A + V L
Sbjct: 329 PQWDMCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLN 388
Query: 371 TPVRTAWYPWYTQ-----GEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFIN 425
+ PW + ++ G+ + ++ F+T++GAGH VP+ +P A +FS F+N
Sbjct: 389 QKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLN 448
Query: 426 G 426
Sbjct: 449 K 449
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 432 | |||
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 100.0 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 100.0 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 100.0 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 100.0 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.11 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 98.94 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 98.93 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 98.88 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 98.87 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 98.86 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 98.83 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 98.78 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 98.77 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 98.75 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 98.69 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 98.66 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 98.65 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 98.52 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 98.48 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 98.37 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 98.32 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 98.29 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 98.21 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 98.02 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 98.01 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 98.0 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 97.97 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 97.8 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 97.75 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 97.71 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 97.6 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 97.59 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 97.52 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 97.48 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 97.45 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 97.39 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 97.35 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 97.32 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 97.3 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 97.21 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 97.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 96.96 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 96.85 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 96.75 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 96.66 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 96.49 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 96.48 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 96.47 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 95.39 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 94.82 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 94.75 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 94.6 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 94.15 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 93.95 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 91.91 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 91.45 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 91.39 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 91.23 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 90.16 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 89.91 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 88.84 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 88.79 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 86.44 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 86.38 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 86.16 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 84.7 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 84.61 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 84.24 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 83.56 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 82.31 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 82.06 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 82.02 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 80.82 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 80.75 |
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-87 Score=691.10 Aligned_cols=351 Identities=32% Similarity=0.618 Sum_probs=303.5
Q ss_pred ccCCccccCCCCCCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCC
Q 042005 70 KDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKD 149 (432)
Q Consensus 70 ~~~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~ 149 (432)
+++++|++|||++.++++++|||||+|++ ++|||||||||+++|+++||||||||||||||| +|+|.|+|||+++.+
T Consensus 2 ~~~~~v~~lPg~~~~~~~~~ysGyl~~~~--~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~~~e~GP~~v~~~ 78 (452)
T d1ivya_ 2 PDQDEIQRLPGLAKQPSFRQYSGYLKSSG--SKHLHYWFVESQKDPENSPVVLWLNGGPGCSSL-DGLLTEHGPFLVQPD 78 (452)
T ss_dssp CTTTBCSSCTTCSSCCSSCEEEEEEECST--TEEEEEEEECCSSCGGGSCEEEEECCTTTBCTH-HHHHTTTSSEEECTT
T ss_pred CccCccccCcCcCCCCCccceeeeeecCC--CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HHHHHccCCcEEcCC
Confidence 46889999999998899999999999975 589999999999999999999999999999999 599999999999999
Q ss_pred CCeeecCCCCCCC-------------CC-------cccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchH
Q 042005 150 GKTLYQNEYAWNK-------------DY-------KVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQ 209 (432)
Q Consensus 150 ~~~l~~N~~SW~~-------------~~-------~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~ 209 (432)
+.+++.||||||+ ++ ..+++.++|.|+++||++||++||+++++|+||+||||||||||.
T Consensus 79 ~~~~~~N~~SW~~~anllfIDqPvGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ 158 (452)
T d1ivya_ 79 GVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPT 158 (452)
T ss_dssp SSCEEECTTCGGGSSEEEEECCSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHH
T ss_pred CCeeccCCcchhcccCEEEEecCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHH
Confidence 8889999999999 11 135678999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhhhccccc----CCCChHHHHHHH
Q 042005 210 LAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFAS----LNSSDKVCLEFI 285 (432)
Q Consensus 210 lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~----~~~~~~~C~~~~ 285 (432)
||.+|++++ .+||+||+||||++|+..+..++.+|++.||+|++++++.+++.|.... .......|..++
T Consensus 159 ia~~i~~~~------~i~l~Gi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (452)
T d1ivya_ 159 LAVLVMQDP------SMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNL 232 (452)
T ss_dssp HHHHHTTCT------TSCEEEEEEESCCSBHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHEETTEECCSSCCCHHHHHHH
T ss_pred HHHHHHhcC------cccccceEcCCCccCchhcchhHHHHHHhcccccchHHHHHHHHHhhhhhhhhccccCHHHHHHH
Confidence 999999754 5999999999999999999999999999999999999999988776431 134567899888
Q ss_pred HHHHHhc--CCCcccccCCCcCCCCCCc---------------------------------C---------------CCC
Q 042005 286 DQGDAAA--GNIYSYDIYAPLCNSSSKF---------------------------------N---------------TEI 315 (432)
Q Consensus 286 ~~~~~~~--g~~n~Ydi~~~~c~~~~~~---------------------------------~---------------~pY 315 (432)
+.+.... .++|.|+++.+.|...... . ..|
T Consensus 233 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 312 (452)
T d1ivya_ 233 QEVARIVGNSGLNIYNLYAPCAGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTY 312 (452)
T ss_dssp HHHHHHHHSSSCCTTCTTSCCTTCCSSSEEEETTEEEECCCSCSSTTSCCCCCCGGGHHHHTCEEEECCTTCCCHHHHHH
T ss_pred HHHHHHhccCCCChhhhccccccCCcchhhhhhcchhhhhhhhhhcccccccccchhccccCccccCCCCCccchHHHHH
Confidence 8776654 5799999987655321100 0 018
Q ss_pred cCccc---cc------cccc-----------cCCCCcHH-HHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCC
Q 042005 316 ANSGE---IN------RNWK-----------DKPQTVLP-IIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVR 374 (432)
Q Consensus 316 LN~~~---~~------~~w~-----------d~~~~~~~-~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~ 374 (432)
||+++ .+ ..|. +...++.+ .++.|+++++|||||+||+|++||+.||+.|+++|+|.++
T Consensus 313 ln~~~V~~aL~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~~~rVliy~Gd~D~~~~~~gte~~i~~l~~~~~ 392 (452)
T d1ivya_ 313 LNNPYVRKALNIPEQLPQWDMCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKME 392 (452)
T ss_dssp HTSHHHHHHTTCCTTSCCCCSBCHHHHHHCBCCCSBSHHHHHHHHHHTCCEEEEEEETTCSSSCHHHHHHHHHHTCCCEE
T ss_pred hcCHHHHHhcCCCCcccccccccchhhhhhhcccccchHHHHHHHHhCCCEEEEEeCCcceeCCCHHHHHHHHhcCCccc
Confidence 88887 11 1233 44455555 4556667899999999999999999999999999999999
Q ss_pred ccceeeee-----cCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHHHHcCCCC
Q 042005 375 TAWYPWYT-----QGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFINGTLP 429 (432)
Q Consensus 375 ~~~~~w~~-----~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~ 429 (432)
.+|++|+. +++++||+|+|+||||++|++||||||+|||++|++||+|||+|+|+
T Consensus 393 ~~~~~~~~~~~~~~~~v~G~v~~~~nltf~~V~~AGHmVP~dqP~~a~~m~~~fi~g~pf 452 (452)
T d1ivya_ 393 VQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQPY 452 (452)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHHHHHHHHHTTCCC
T ss_pred cccccceecccCCCCEEEEEEEEECCeEEEEECCccccCcccCHHHHHHHHHHHHcCCCC
Confidence 99999975 36899999999999999999999999999999999999999999986
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7e-83 Score=651.93 Aligned_cols=338 Identities=30% Similarity=0.517 Sum_probs=281.1
Q ss_pred CCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCCCCeeecCCCCCC
Q 042005 82 PLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWN 161 (432)
Q Consensus 82 ~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~~~~l~~N~~SW~ 161 (432)
..++++++|||||+|++ ++++||||||||+++|+++||||||||||||||| +|+|.|+|||++++++ +++.||||||
T Consensus 9 ~~~~~~~~ysGyl~v~~-~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS~-~g~~~e~GP~~i~~~~-~~~~N~~sW~ 85 (421)
T d1wpxa1 9 GIDPNVTQYTGYLDVED-EDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSL-TGLFFELGPSSIGPDL-KPIGNPYSWN 85 (421)
T ss_dssp SSSSSSCEEEEEEECTT-SCCEEEEEEECCSSCTTTSCEEEEECCTTTBCTH-HHHHHTTSSEEECTTS-CEEECTTCGG
T ss_pred CCCCCCceeeeeeecCC-CCceEEEEEEEeCCCCCCCCEEEEECCCCcHHHH-HHHHHhcCCcEECCCC-ccccCCcccc
Confidence 33467899999999975 3689999999999999999999999999999999 5999999999999886 6999999999
Q ss_pred C---------------CCc----ccCChhhHHHHHHHHHHHHHHCCCC--CCCCeEEEccccccccchHHHHHHHHhccc
Q 042005 162 K---------------DYK----VNGDIRTARDSYTFLVSWLARFPEY--KTRDFFIAGESYAGHYIPQLAQAILYNNQH 220 (432)
Q Consensus 162 ~---------------~~~----~~~~~~~a~d~~~fL~~F~~~fP~~--~~~~~yI~GESYaG~yvP~lA~~I~~~n~~ 220 (432)
+ +|. ..++.++|+|+++||++||++||++ +++||||+||||||+|||.||.+|+++|+
T Consensus 86 ~~anllfiD~PvGtGfSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~- 164 (421)
T d1wpxa1 86 SNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKD- 164 (421)
T ss_dssp GSSEEEEECCSTTSTTCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSS-
T ss_pred cccCEEEEecCCCCCceecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccC-
Confidence 9 222 2467899999999999999999999 78999999999999999999999999874
Q ss_pred cccceeeeeeeEeccccccccccchhhHHHHHhcC----CCCHHHHHhHhhhccc---c-c---CCCChHHHHHHHHHHH
Q 042005 221 ANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHA----LMPDEIYHGLTSSYNF---A-S---LNSSDKVCLEFIDQGD 289 (432)
Q Consensus 221 ~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~g----lI~~~~~~~~~~~C~~---~-~---~~~~~~~C~~~~~~~~ 289 (432)
..+|||||+||||++||..+...+.+|++.++ ++++++++.+.+.|.. . . .......|..+...+.
T Consensus 165 ---~~inlkGi~iGng~~dp~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 241 (421)
T d1wpxa1 165 ---RNFNLTSVLIGNGLTDPLTQYNYYEPMACGEGGEPSVLPSEECSAMEDSLERCLGLIESCYDSQSVWSCVPATIYCN 241 (421)
T ss_dssp ---CSSCCCEEEEESCCCCHHHHGGGHHHHHTTCSSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred ---CCcceeeeEecCCcccchhhhhhHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhc
Confidence 47999999999999999999999999999998 8888888776554321 0 0 0122233433222222
Q ss_pred H------hcCCCcccccCCCcCCCCCCcC------CCCcCccc---cc----cccc--------------cCCCCcHHHH
Q 042005 290 A------AAGNIYSYDIYAPLCNSSSKFN------TEIANSGE---IN----RNWK--------------DKPQTVLPII 336 (432)
Q Consensus 290 ~------~~g~~n~Ydi~~~~c~~~~~~~------~pYLN~~~---~~----~~w~--------------d~~~~~~~~l 336 (432)
. ...+.+.||++.+ |....... ..|||+++ ++ ..|. |.+.++.+.+
T Consensus 242 ~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~~ylN~~~Vq~aL~v~~~~~~~cs~~v~~~~~~~~d~~~~~~~~l 320 (421)
T d1wpxa1 242 NAQLAPYQRTGRNVYDIRKD-CEGGNLCYPTLQDIDDYLNQDYVKEAVGAEVDHYESCNFDINRNFLFAGDWMKPYHTAV 320 (421)
T ss_dssp HHHTHHHHHTTBCSSCTTSB-CCSSTTSCTTHHHHHHHHTSHHHHHHHTCCSSSCCSBCHHHHHHHHTTTCTTCCTTHHH
T ss_pred ccccchhhhcCccccccccc-ccCCCcCCCcHhhhhhhhccHHHHHHhCCCCCcceecCchHhhhhhccCcccCcHHHHH
Confidence 1 1247789999864 65432211 24999987 11 2343 4567788999
Q ss_pred HHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCc-----cceeeee--cCeeeeEEEEecceEEEEEcCCccccc
Q 042005 337 QELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRT-----AWYPWYT--QGEVGGYAVGYQNLTFVTVRGAGHFVP 409 (432)
Q Consensus 337 ~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~-----~~~~w~~--~~~~~G~~k~~~nLTf~~V~~AGHmvP 409 (432)
+.||++++|||||+||+|++||+.||++||++|+|++.+ ++++|+. +++++||+|+|+||||++|++||||||
T Consensus 321 ~~LL~~~irVLIysGd~D~~~p~~Gte~~i~~L~w~~~~~f~~~~~~~w~~~~~~~~aG~~~~~~nltf~~V~~AGHmvP 400 (421)
T d1wpxa1 321 TDLLNQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVP 400 (421)
T ss_dssp HHHHHTTCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEEEEETTEEEEEETTCCSSHH
T ss_pred HHHHhcCCeEEEEeCCcCccCCchhHHHHHHhCCCCcccchhcCcccceeecCCCeEEEEEEEECCeEEEEECCccccCc
Confidence 999999999999999999999999999999999999986 4578874 679999999999999999999999999
Q ss_pred ccChHHHHHHHHHHHcCC
Q 042005 410 SYQPARALVLFSSFINGT 427 (432)
Q Consensus 410 ~dqP~~a~~m~~~fl~~~ 427 (432)
+|||++|++||++||+|.
T Consensus 401 ~d~P~~a~~m~~~fi~G~ 418 (421)
T d1wpxa1 401 FDVPENALSMVNEWIHGG 418 (421)
T ss_dssp HHCHHHHHHHHHHHHTTT
T ss_pred ccCHHHHHHHHHHHhcCC
Confidence 999999999999999874
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=100.00 E-value=1.1e-82 Score=661.30 Aligned_cols=353 Identities=26% Similarity=0.428 Sum_probs=280.3
Q ss_pred ccCCCCCCCCC----ceeEEeeEEecC-------CCCceEEEEEEEcCCCCC--CCCeEEEEcCCCChhhhhHhhhhhcC
Q 042005 76 ESLPGQPLGVN----FDQYSGYVNVDS-------QDGRSLFYYFVESPQNSS--SKPLVLWLNGGPGFSSFGAGTMMELG 142 (432)
Q Consensus 76 ~~lpg~~~~~~----~~~ysGyl~v~~-------~~~~~lFywf~es~~~p~--~~PlilWlnGGPGcSSl~~G~f~E~G 142 (432)
..|||++.... +++|||||++.+ +.+.+|||||||++.+++ ++||||||||||||||| .|+|+|+|
T Consensus 12 ~~lPg~~~~~~~~~~~~~yaG~l~~~~~~~~~~~~~~~~~ffw~fe~~~~~~~~~~Pl~lWlnGGPGcSS~-~g~f~E~G 90 (483)
T d1ac5a_ 12 ELLPGLSEVPDPSNIPQMHAGHIPLRSEDADEQDSSDLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSM-DGALVESG 90 (483)
T ss_dssp GGSTTGGGCSCTTSSCEEEEEEEECSCSSSCSSCCCCCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTH-HHHHHSSS
T ss_pred ccCCCCCCCCCCCCcccceeeEEecCcccCCCCCCCcceEEEEEEEecCCCCCCCCCEEEEECCCCcHHHH-HHHHHccC
Confidence 37888853111 489999999943 335699999999988764 57999999999999999 59999999
Q ss_pred CeEEcCCCCeeecCCCCCCC---------------CCc-------------ccCChhhHHHHHHHHHHHHHHCCCCCCCC
Q 042005 143 PFRVNKDGKTLYQNEYAWNK---------------DYK-------------VNGDIRTARDSYTFLVSWLARFPEYKTRD 194 (432)
Q Consensus 143 P~~~~~~~~~l~~N~~SW~~---------------~~~-------------~~~~~~~a~d~~~fL~~F~~~fP~~~~~~ 194 (432)
||+++.++ +++.||||||+ +|. ..+++++|+++++||++||++||+|++++
T Consensus 91 P~~v~~~~-~l~~Np~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~ 169 (483)
T d1ac5a_ 91 PFRVNSDG-KLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRK 169 (483)
T ss_dssp SEEECTTS-CEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSE
T ss_pred CeEECCCC-ceeeCCCcccccCCEEEEeCCCCcCeeecCCCCccccccccccCCHHHHHHHHHHHHHHHHHhCcccccCC
Confidence 99999887 69999999999 232 12446799999999999999999999999
Q ss_pred eEEEccccccccchHHHHHHHHhcccc--ccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHH--Hh---Hhh
Q 042005 195 FFIAGESYAGHYIPQLAQAILYNNQHA--NQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIY--HG---LTS 267 (432)
Q Consensus 195 ~yI~GESYaG~yvP~lA~~I~~~n~~~--~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~--~~---~~~ 267 (432)
|||+||||||||||+||.+|+++|+.. ....||||||+||||++||..|..++.+|++.+|+|++..+ .+ ..+
T Consensus 170 ~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~d~~~q~~sy~~~~~~~gli~~~~~~~~~~~~~~~ 249 (483)
T d1ac5a_ 170 IILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWIDPNTQSLSYLPFAMEKKLIDESNPNFKHLTNAHE 249 (483)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCCHHHHHTTHHHHHHHTTSCCTTSTTHHHHHHHHH
T ss_pred eEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCccChhhhhhhHHHHHHHcCCCChHHHHHHHHHHHHH
Confidence 999999999999999999999998643 24579999999999999999999999999999999997532 12 223
Q ss_pred hcccc-------c-CCCChHHHHHHHHHHHHhc---------CCCcccccCCC----cCCCCCCcC----CCCcCccc--
Q 042005 268 SYNFA-------S-LNSSDKVCLEFIDQGDAAA---------GNIYSYDIYAP----LCNSSSKFN----TEIANSGE-- 320 (432)
Q Consensus 268 ~C~~~-------~-~~~~~~~C~~~~~~~~~~~---------g~~n~Ydi~~~----~c~~~~~~~----~pYLN~~~-- 320 (432)
.|... . .......|..+.+.+.... .++|.|++... .|....... ..|||+++
T Consensus 250 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~y~~~~~~~~~~~~~~~p~~~~~~~~yln~~~V~ 329 (483)
T d1ac5a_ 250 NCQNLINSASTDEAAHFSYQECENILNLLLSYTRESSQKGTADCLNMYNFNLKDSYPSCGMNWPKDISFVSKFFSTPGVI 329 (483)
T ss_dssp HHHHHHHHCCSGGGGSSSCHHHHTHHHHHHHHTCCCCTTSTTSEEETTEEEEEECTTTTTTTCCTHHHHHHHHHTSTTHH
T ss_pred HHHHHHHhhccchhhhhhHHHHHHHHHHHhhhccchhhccccccccccccccCCCCcccccCCccchhHHHHHhcChhhh
Confidence 34320 0 1123356776666554432 13566766432 121111110 23999998
Q ss_pred -cc-------cccc------------cCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccc---
Q 042005 321 -IN-------RNWK------------DKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAW--- 377 (432)
Q Consensus 321 -~~-------~~w~------------d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~--- 377 (432)
++ ..|. |.++++.+.++.||++|+|||||+||+|++||+.|+++|+++|+|++.+.|
T Consensus 330 ~ALhv~~~~~~~w~~cs~~v~~~~~~d~~~~~~~~l~~LL~~girVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f~~~ 409 (483)
T d1ac5a_ 330 DSLHLDSDKIDHWKECTNSVGTKLSNPISKPSIHLLPGLLESGIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDD 409 (483)
T ss_dssp HHTTCCTTTCCCCCSBCHHHHHHCCCSSCCCGGGGHHHHHHTTCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTT
T ss_pred hhhhcCCCCccccccCChHHHHHhcCCccccHHHHHHHHHHCCCEEEEEECChhhcCCCHHHHHHHHhCCCccccccccC
Confidence 11 2365 346778899999999999999999999999999999999999999987654
Q ss_pred ---eeeee-------cCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHHHHcCCCCC
Q 042005 378 ---YPWYT-------QGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSFINGTLPP 430 (432)
Q Consensus 378 ---~~w~~-------~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~~ 430 (432)
++|+. +++++||+|+++||||++|++||||||+|||++|++||++||++..+.
T Consensus 410 ~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~~ 472 (483)
T d1ac5a_ 410 AVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVPFDKSLVSRGIVDIYSNDVMII 472 (483)
T ss_dssp CEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHHHHCHHHHHHHHHHHTTCCEEE
T ss_pred ccccccccccccccCCcEEEEEEEEeCCeEEEEECCccccCcccCHHHHHHHHHHHhCCcccc
Confidence 46654 358899999999999999999999999999999999999999987664
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.11 E-value=6.4e-09 Score=94.43 Aligned_cols=59 Identities=20% Similarity=0.210 Sum_probs=48.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+.+|+.|.+++. ..+.+.+.+. |..++.+.++||+++.++|++..+.|..
T Consensus 230 ~~P~l~i~G~~D~~~~~-~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 284 (290)
T d1mtza_ 230 KIPTLITVGEYDEVTPN-VARVIHEKIA------------------------GSELHVFRDCSHLTMWEDREGYNKLLSD 284 (290)
T ss_dssp CSCEEEEEETTCSSCHH-HHHHHHHHST------------------------TCEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred cceEEEEEeCCCCCCHH-HHHHHHHHCC------------------------CCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 58999999999998774 3455555542 4567889999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
||..
T Consensus 285 FL~~ 288 (290)
T d1mtza_ 285 FILK 288 (290)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 9965
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=98.94 E-value=3.2e-08 Score=90.25 Aligned_cols=60 Identities=22% Similarity=0.226 Sum_probs=52.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+..|+.|.+++.....++++++. .+.++.++.+|||+++.++|+...+.|++
T Consensus 234 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~~~gH~~~~e~Pe~~~~~I~~ 290 (293)
T d1ehya_ 234 DLPVTMIWGLGDTCVPYAPLIEFVPKYY-----------------------SNYTMETIEDCGHFLMVEKPEIAIDRIKT 290 (293)
T ss_dssp CSCEEEEEECCSSCCTTHHHHHHHHHHB-----------------------SSEEEEEETTCCSCHHHHCHHHHHHHHHH
T ss_pred CCceEEEEeCCCCCcCHHHHHHHHHHhC-----------------------CCCEEEEECCCCCchHHHCHHHHHHHHHH
Confidence 5899999999999999988777776642 47888999999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|++
T Consensus 291 Ffr 293 (293)
T d1ehya_ 291 AFR 293 (293)
T ss_dssp HCC
T ss_pred hhC
Confidence 973
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=98.93 E-value=3.9e-08 Score=89.14 Aligned_cols=69 Identities=19% Similarity=0.289 Sum_probs=55.2
Q ss_pred HHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh
Q 042005 334 PIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP 413 (432)
Q Consensus 334 ~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP 413 (432)
..++.+-+...+||+..|+.|.+++.....+.+.+. ..+.++.++.+|||+++.++|
T Consensus 210 ~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-----------------------~p~~~~~~i~~~gH~~~~e~p 266 (279)
T d1hkha_ 210 SDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQA-----------------------VPEADYVEVEGAPHGLLWTHA 266 (279)
T ss_dssp HHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHH-----------------------CTTSEEEEETTCCTTHHHHTH
T ss_pred cchhhhcccCCceEEEEcCCCCccCHHHHHHHHHHh-----------------------CCCCEEEEECCCCCchHHhCH
Confidence 445555555799999999999999987665555432 135677899999999999999
Q ss_pred HHHHHHHHHHHc
Q 042005 414 ARALVLFSSFIN 425 (432)
Q Consensus 414 ~~a~~m~~~fl~ 425 (432)
++..+.|..||+
T Consensus 267 ~~v~~~i~~fl~ 278 (279)
T d1hkha_ 267 DEVNAALKTFLA 278 (279)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC
Confidence 999999999985
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=98.88 E-value=2.6e-08 Score=90.95 Aligned_cols=62 Identities=13% Similarity=0.173 Sum_probs=54.3
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
+-.++||+..|..|.+++....+++.+.+. +..++++.+|||+++.++|++..+.+
T Consensus 228 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~i~~~gH~~~~e~p~~v~~~i 283 (291)
T d1bn7a_ 228 QSPVPKLLFWGTPGVLIPPAEAARLAESLP------------------------NCKTVDIGPGLHYLQEDNPDLIGSEI 283 (291)
T ss_dssp HCCSCEEEEEEEECSSSCHHHHHHHHHHST------------------------TEEEEEEEEESSCGGGTCHHHHHHHH
T ss_pred cCCCCEEEEEeCCCCCcCHHHHHHHHHHCC------------------------CCEEEEECCCCCchHHhCHHHHHHHH
Confidence 346899999999999999988877777653 56778999999999999999999999
Q ss_pred HHHHcC
Q 042005 421 SSFING 426 (432)
Q Consensus 421 ~~fl~~ 426 (432)
.+||++
T Consensus 284 ~~fL~~ 289 (291)
T d1bn7a_ 284 ARWLPG 289 (291)
T ss_dssp HHHSGG
T ss_pred HHHHHh
Confidence 999975
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=4.2e-08 Score=91.07 Aligned_cols=60 Identities=12% Similarity=0.158 Sum_probs=49.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+..|+.|.+++....+.+.+. ..+.++.+|.+|||+++.++|++..+.+.+
T Consensus 259 ~~Pvl~i~G~~D~~~~~~~~~~~~~~------------------------~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~ 314 (322)
T d1zd3a2 259 LIPALMVTAEKDFVLVPQMSQHMEDW------------------------IPHLKRGHIEDCGHWTQMDKPTEVNQILIK 314 (322)
T ss_dssp CSCEEEEEETTCSSSCGGGGTTGGGT------------------------CTTCEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHh------------------------CCCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 47899999999999987654433322 246788999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
||+.
T Consensus 315 FL~~ 318 (322)
T d1zd3a2 315 WLDS 318 (322)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 9964
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=98.86 E-value=2.8e-08 Score=92.49 Aligned_cols=62 Identities=16% Similarity=0.132 Sum_probs=51.0
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecce-EEEEEcCCcccccccChHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNL-TFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nL-Tf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
-..+||+..|+.|.+++....+.+.+.++ +. .++++.+|||+++.++|+...+.|
T Consensus 248 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~i~~~GH~~~~e~pe~v~~~i 303 (310)
T d1b6ga_ 248 WNGQTFMAIGMKDKLLGPDVMYPMKALIN------------------------GCPEPLEIADAGHFVQEFGEQVAREAL 303 (310)
T ss_dssp CCSEEEEEEETTCSSSSHHHHHHHHHHST------------------------TCCCCEEETTCCSCGGGGHHHHHHHHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhcC------------------------CCccEEEECCCcCchhhhCHHHHHHHH
Confidence 35899999999999999877766665543 11 346799999999999999999999
Q ss_pred HHHHcCC
Q 042005 421 SSFINGT 427 (432)
Q Consensus 421 ~~fl~~~ 427 (432)
++|+..+
T Consensus 304 ~~Fl~~~ 310 (310)
T d1b6ga_ 304 KHFAETE 310 (310)
T ss_dssp HHHHHTC
T ss_pred HHHHhCC
Confidence 9999754
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=98.83 E-value=1.8e-08 Score=92.13 Aligned_cols=59 Identities=17% Similarity=0.285 Sum_probs=52.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+..|+.|.++|....+.+.+.+. |..+.++.+|||+++.++|+...+++.+
T Consensus 222 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 277 (281)
T d1c4xa_ 222 PHDVLVFHGRQDRIVPLDTSLYLTKHLK------------------------HAELVVLDRCGHWAQLERWDAMGPMLME 277 (281)
T ss_dssp CSCEEEEEETTCSSSCTHHHHHHHHHCS------------------------SEEEEEESSCCSCHHHHSHHHHHHHHHH
T ss_pred ccceEEEEeCCCCCcCHHHHHHHHHHCC------------------------CCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 4799999999999999988888877653 5677899999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|++
T Consensus 278 Fl~ 280 (281)
T d1c4xa_ 278 HFR 280 (281)
T ss_dssp HHH
T ss_pred HhC
Confidence 985
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=98.78 E-value=9.6e-08 Score=86.22 Aligned_cols=61 Identities=16% Similarity=0.195 Sum_probs=53.3
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+||+..|+.|.++|....+.+.+.++ +.++.++.++||+++.++|+...+.+.
T Consensus 210 i~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i~ 265 (271)
T d1uk8a_ 210 LPNETLIIHGREDQVVPLSSSLRLGELID------------------------RAQLHVFGRCGHWTQIEQTDRFNRLVV 265 (271)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHCT------------------------TEEEEEESSCCSCHHHHTHHHHHHHHH
T ss_pred hccceeEEecCCCCCcCHHHHHHHHHhCC------------------------CCEEEEECCCCCchHHHCHHHHHHHHH
Confidence 35899999999999999988777776653 567889999999999999999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+||+.
T Consensus 266 ~Fl~e 270 (271)
T d1uk8a_ 266 EFFNE 270 (271)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99963
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=98.77 E-value=1.3e-06 Score=79.61 Aligned_cols=60 Identities=13% Similarity=0.186 Sum_probs=52.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.+++....+.+.+.+. +-++.++.+|||++|.++|+...+.|.+
T Consensus 236 ~~Pvlvi~G~~D~~~~~~~~~~~~~~~p------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 291 (297)
T d1q0ra_ 236 TVPTLVIQAEHDPIAPAPHGKHLAGLIP------------------------TARLAEIPGMGHALPSSVHGPLAEVILA 291 (297)
T ss_dssp CSCEEEEEETTCSSSCTTHHHHHHHTST------------------------TEEEEEETTCCSSCCGGGHHHHHHHHHH
T ss_pred CCceEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCEEEEECCCCCcchhhCHHHHHHHHHH
Confidence 5899999999999999887777666643 5677899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+++
T Consensus 292 ~l~~ 295 (297)
T d1q0ra_ 292 HTRS 295 (297)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9864
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=98.75 E-value=1.2e-07 Score=86.30 Aligned_cols=60 Identities=12% Similarity=0.172 Sum_probs=53.0
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+..|+.|.+++....+.+.+.+. +.++.++.+|||+++.++|+...+++.+
T Consensus 223 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 278 (283)
T d2rhwa1 223 KAKTFITWGRDDRFVPLDHGLKLLWNID------------------------DARLHVFSKCGHWAQWEHADEFNRLVID 278 (283)
T ss_dssp CSCEEEEEETTCSSSCTHHHHHHHHHSS------------------------SEEEEEESSCCSCHHHHTHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCcCHHHHHHHHHhCC------------------------CCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 5899999999999999988887777753 5577899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
||+.
T Consensus 279 FLk~ 282 (283)
T d2rhwa1 279 FLRH 282 (283)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 9963
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=98.69 E-value=7.3e-07 Score=83.06 Aligned_cols=54 Identities=17% Similarity=0.140 Sum_probs=43.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
+++||+.+|+.|.++|....+.+.+.+. +..+.+|.+|||+. + +|+..-++++.
T Consensus 255 ~~P~lii~G~~D~~~p~~~~~~l~~~~p------------------------~a~~~~i~~aGH~~-~-ep~~~~~li~a 308 (313)
T d1azwa_ 255 DIPGVIVHGRYDVVCPLQSAWDLHKAWP------------------------KAQLQISPASGHSA-F-EPENVDALVRA 308 (313)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHCT------------------------TSEEEEETTCCSST-T-SHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHCC------------------------CCEEEEECCCCCCC-C-CchHHHHHHHH
Confidence 5799999999999999888777777653 55678999999984 3 68877666653
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=98.66 E-value=1.9e-07 Score=84.15 Aligned_cols=61 Identities=20% Similarity=0.187 Sum_probs=51.7
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-.++||+..|+.|.++|.....+++.++- .+.+++++.+|||+++.++|++..+.|.
T Consensus 214 i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 270 (275)
T d1a88a_ 214 IDVPVLVAHGTDDQVVPYADAAPKSAELL-----------------------ANATLKSYEGLPHGMLSTHPEVLNPDLL 270 (275)
T ss_dssp CCSCEEEEEETTCSSSCSTTTHHHHHHHS-----------------------TTEEEEEETTCCTTHHHHCHHHHHHHHH
T ss_pred hccccceeecCCCCCcCHHHHHHHHHHhC-----------------------CCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 36899999999999999876666665431 3667899999999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+||+
T Consensus 271 ~Fl~ 274 (275)
T d1a88a_ 271 AFVK 274 (275)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 9985
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=98.65 E-value=1e-06 Score=79.02 Aligned_cols=60 Identities=17% Similarity=0.168 Sum_probs=53.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+..|+.|.++|....+.+.+.+ .+.+++++.+|||+++.++|+...+.+.+
T Consensus 208 ~~P~l~i~G~~D~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 263 (268)
T d1j1ia_ 208 QVPTLVVQGKDDKVVPVETAYKFLDLI------------------------DDSWGYIIPHCGHWAMIEHPEDFANATLS 263 (268)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHC------------------------TTEEEEEESSCCSCHHHHSHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhC------------------------CCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 589999999999999988877777664 36688999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
||..
T Consensus 264 FL~~ 267 (268)
T d1j1ia_ 264 FLSL 267 (268)
T ss_dssp HHHH
T ss_pred HHcC
Confidence 9964
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=98.52 E-value=5e-06 Score=74.43 Aligned_cols=60 Identities=20% Similarity=0.264 Sum_probs=51.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|++..|..|.+++.....+++.+.- .+.+++++.+|||+++.++|++..+.|..
T Consensus 217 ~~P~lii~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 273 (277)
T d1brta_ 217 DVPALILHGTGDRTLPIENTARVFHKAL-----------------------PSAEYVEVEGAPHGLLWTHAEEVNTALLA 273 (277)
T ss_dssp CSCEEEEEETTCSSSCGGGTHHHHHHHC-----------------------TTSEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred CccceeEeecCCCCcCHHHHHHHHHHhC-----------------------CCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 5899999999999999887766665421 35678999999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
||.
T Consensus 274 fL~ 276 (277)
T d1brta_ 274 FLA 276 (277)
T ss_dssp HHH
T ss_pred HHC
Confidence 985
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.48 E-value=1.1e-06 Score=78.01 Aligned_cols=193 Identities=18% Similarity=0.177 Sum_probs=117.9
Q ss_pred ceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhH------hhhhhcCC--eEEcCCCCeeecCCC
Q 042005 87 FDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGA------GTMMELGP--FRVNKDGKTLYQNEY 158 (432)
Q Consensus 87 ~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~------G~f~E~GP--~~~~~~~~~l~~N~~ 158 (432)
.++..|+|+|+ |.++||.-.... ...++|.||.+.|.++++.. + -.|.+.|= +.++.-| +
T Consensus 4 ~~~~e~~i~v~---G~~i~y~~~~~~-~~~~~~~vvllHG~~~~~~~-w~~~~~~~~la~~gy~via~D~~G-------~ 71 (208)
T d1imja_ 4 VEQREGTIQVQ---GQALFFREALPG-SGQARFSVLLLHGIRFSSET-WQNLGTLHRLAQAGYRAVAIDLPG-------L 71 (208)
T ss_dssp EEECCCCEEET---TEEECEEEEECS-SSCCSCEEEECCCTTCCHHH-HHHHTHHHHHHHTTCEEEEECCTT-------S
T ss_pred CCceEEEEEEC---CEEEEEEEecCC-CCCCCCeEEEECCCCCChhH-HhhhHHHHHHHHcCCeEEEeeccc-------c
Confidence 45567889985 578988755433 33567788899999998875 2 23566661 2223222 2
Q ss_pred CCCC---CCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecc
Q 042005 159 AWNK---DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGN 235 (432)
Q Consensus 159 SW~~---~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGN 235 (432)
.... ..........++++.++++. +...+++|.|+|+|| .+|..+..+.. -.++++++..
T Consensus 72 G~S~~~~~~~~~~~~~~~~~l~~~~~~-------l~~~~~~lvG~S~Gg----~~a~~~a~~~p------~~v~~lV~~~ 134 (208)
T d1imja_ 72 GHSKEAAAPAPIGELAPGSFLAAVVDA-------LELGPPVVISPSLSG----MYSLPFLTAPG------SQLPGFVPVA 134 (208)
T ss_dssp GGGTTSCCSSCTTSCCCTHHHHHHHHH-------HTCCSCEEEEEGGGH----HHHHHHHTSTT------CCCSEEEEES
T ss_pred cCCCCCCcccccchhhhhhhhhhcccc-------cccccccccccCcHH----HHHHHHHHHhh------hhcceeeecC
Confidence 2221 01112333445554444443 233578999999999 56666555442 3578888765
Q ss_pred ccccccccchhhHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCC
Q 042005 236 ALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEI 315 (432)
Q Consensus 236 g~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pY 315 (432)
|...+. + .
T Consensus 135 p~~~~~----------------------------------------------------------~-~------------- 142 (208)
T d1imja_ 135 PICTDK----------------------------------------------------------I-N------------- 142 (208)
T ss_dssp CSCGGG----------------------------------------------------------S-C-------------
T ss_pred cccccc----------------------------------------------------------c-c-------------
Confidence 521100 0 0
Q ss_pred cCccccccccccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecc
Q 042005 316 ANSGEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQN 395 (432)
Q Consensus 316 LN~~~~~~~w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~n 395 (432)
.. .+-+-..+||+..|+.|.++|.. .+.++.+ .+
T Consensus 143 -----------------~~---~~~~i~~P~Lii~G~~D~~~~~~--~~~~~~~------------------------~~ 176 (208)
T d1imja_ 143 -----------------AA---NYASVKTPALIVYGDQDPMGQTS--FEHLKQL------------------------PN 176 (208)
T ss_dssp -----------------HH---HHHTCCSCEEEEEETTCHHHHHH--HHHHTTS------------------------SS
T ss_pred -----------------cc---cccccccccccccCCcCcCCcHH--HHHHHhC------------------------CC
Confidence 00 11122479999999999987742 2222221 23
Q ss_pred eEEEEEcCCcccccccChHHHHHHHHHHHcC
Q 042005 396 LTFVTVRGAGHFVPSYQPARALVLFSSFING 426 (432)
Q Consensus 396 LTf~~V~~AGHmvP~dqP~~a~~m~~~fl~~ 426 (432)
-.+.++.+|||....++|++-.+.+.+||++
T Consensus 177 ~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 177 HRVLIMKGAGHPCYLDKPEEWHTGLLDFLQG 207 (208)
T ss_dssp EEEEEETTCCTTHHHHCHHHHHHHHHHHHHT
T ss_pred CeEEEECCCCCchhhhCHHHHHHHHHHHHhc
Confidence 3568899999999999999999999999975
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=98.37 E-value=8.6e-06 Score=72.65 Aligned_cols=61 Identities=23% Similarity=0.304 Sum_probs=53.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+..|..|.++|....+.+.+.+. .+.+++++.+|||+++.++|++..+.|..
T Consensus 213 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 269 (273)
T d1a8sa_ 213 DVPTLVVHGDADQVVPIEASGIASAALV-----------------------KGSTLKIYSGAPHGLTDTHKDQLNADLLA 269 (273)
T ss_dssp CSCEEEEEETTCSSSCSTTTHHHHHHHS-----------------------TTCEEEEETTCCSCHHHHTHHHHHHHHHH
T ss_pred ccceEEEecCCCCCCCHHHHHHHHHHhC-----------------------CCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 5899999999999999888777776653 35677889999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
||+|
T Consensus 270 Fl~G 273 (273)
T d1a8sa_ 270 FIKG 273 (273)
T ss_dssp HHHC
T ss_pred HcCC
Confidence 9976
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=98.32 E-value=2.2e-05 Score=70.08 Aligned_cols=60 Identities=20% Similarity=0.246 Sum_probs=49.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc--cChHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS--YQPARALVLF 420 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~--dqP~~a~~m~ 420 (432)
..+||+..|+.|.+++.....+.+.+.- .+.++.++.+|||+++. ++|++..+.+
T Consensus 212 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~~~gH~~~~~~~~p~~~~~~i 268 (274)
T d1a8qa_ 212 DIPTLVVHGDDDQVVPIDATGRKSAQII-----------------------PNAELKVYEGSSHGIAMVPGDKEKFNRDL 268 (274)
T ss_dssp CSCEEEEEETTCSSSCGGGTHHHHHHHS-----------------------TTCEEEEETTCCTTTTTSTTHHHHHHHHH
T ss_pred cceeeeeccCCCCCcCHHHHHHHHHHhC-----------------------CCCEEEEECCCCCcccccccCHHHHHHHH
Confidence 5899999999999999877766665431 35677999999999876 6799999999
Q ss_pred HHHHc
Q 042005 421 SSFIN 425 (432)
Q Consensus 421 ~~fl~ 425 (432)
.+||+
T Consensus 269 ~~FL~ 273 (274)
T d1a8qa_ 269 LEFLN 273 (274)
T ss_dssp HHHHT
T ss_pred HHHHC
Confidence 99996
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=98.29 E-value=4.3e-05 Score=68.16 Aligned_cols=60 Identities=17% Similarity=0.196 Sum_probs=45.3
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
....+||+..|+.|.+++. ..+.+.+.+ .+.+++.+ +|||+++.++|++..+.|
T Consensus 232 ~~~~P~l~i~g~~d~~~~~-~~~~~~~~~------------------------p~~~~~~~-~~GH~~~~e~P~~v~~~i 285 (298)
T d1mj5a_ 232 ESPIPKLFINAEPGALTTG-RMRDFCRTW------------------------PNQTEITV-AGAHFIQEDSPDEIGAAI 285 (298)
T ss_dssp TCCSCEEEEEEEECSSSSH-HHHHHHTTC------------------------SSEEEEEE-EESSCGGGTCHHHHHHHH
T ss_pred hcceeEEEEecCCCCcChH-HHHHHHHHC------------------------CCCEEEEe-CCCCchHHhCHHHHHHHH
Confidence 3468999999999998764 334454443 23344444 689999999999999999
Q ss_pred HHHHcC
Q 042005 421 SSFING 426 (432)
Q Consensus 421 ~~fl~~ 426 (432)
.+||..
T Consensus 286 ~~fl~~ 291 (298)
T d1mj5a_ 286 AAFVRR 291 (298)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999964
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=98.21 E-value=2e-05 Score=70.01 Aligned_cols=60 Identities=17% Similarity=0.113 Sum_probs=48.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||.+|+.|.++|....+...+. ..+.++.++.+|||+++.++|++..+.+..
T Consensus 194 ~~P~lii~G~~D~~~p~~~~~~l~~~------------------------~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 249 (256)
T d1m33a_ 194 SMPFLRLYGYLDGLVPRKVVPMLDKL------------------------WPHSESYIFAKAAHAPFISHPAEFCHLLVA 249 (256)
T ss_dssp CSCEEEEEETTCSSSCGGGCC-CTTT------------------------CTTCEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred cCCccccccccCCCCCHHHHHHHHHH------------------------CCCCEEEEECCCCCchHHHCHHHHHHHHHH
Confidence 57999999999999988654332222 245678999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|++.
T Consensus 250 fl~~ 253 (256)
T d1m33a_ 250 LKQR 253 (256)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 9964
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=98.02 E-value=1.9e-05 Score=71.62 Aligned_cols=136 Identities=21% Similarity=0.255 Sum_probs=74.8
Q ss_pred EEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhh-----HhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccC
Q 042005 94 VNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFG-----AGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNG 168 (432)
Q Consensus 94 l~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~-----~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~ 168 (432)
|......|..+.-|+++..+.+.+.|+|||+-|||+.+.-. ...|.+.|=-.+..|-........+|........
T Consensus 15 v~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~~~~~~ 94 (260)
T d2hu7a2 15 VWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDP 94 (260)
T ss_dssp EEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHTTTTCT
T ss_pred EEEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeecccccccccccccccc
Confidence 34444456788888888776677889999999998654321 1335566733333331101111122222110001
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc
Q 042005 169 DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET 242 (432)
Q Consensus 169 ~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~ 242 (432)
-....+|+...+ +|+.... ...+++|.|.|+|| .++..+...... .+++++...|..+...
T Consensus 95 ~~~~~~D~~~~~-~~l~~~~--~~~~~~i~g~s~gg----~~~~~~~~~~~~------~~~a~i~~~~~~~~~~ 155 (260)
T d2hu7a2 95 CGGELEDVSAAA-RWARESG--LASELYIMGYSYGG----YMTLCALTMKPG------LFKAGVAGASVVDWEE 155 (260)
T ss_dssp TTHHHHHHHHHH-HHHHHTT--CEEEEEEEEETHHH----HHHHHHHHHSTT------SSSEEEEESCCCCHHH
T ss_pred chhhhhhhcccc-ccccccc--ccceeecccccccc----ccccchhccCCc------ccccccccccchhhhh
Confidence 112234444433 3444443 34678999999999 455555554321 2677888888877543
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.01 E-value=5.3e-05 Score=65.00 Aligned_cols=65 Identities=8% Similarity=0.026 Sum_probs=54.7
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccccc-ChHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSY-QPARALVL 419 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~d-qP~~a~~m 419 (432)
.-..+||+.+|..|.+++...++.+.+.++ ..+.+++++.+|||++..+ +|+...+.
T Consensus 175 ~~~~p~lii~g~~D~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 232 (242)
T d1tqha_ 175 LIYAPTFVVQARHDEMINPDSANIIYNEIE----------------------SPVKQIKWYEQSGHVITLDQEKDQLHED 232 (242)
T ss_dssp GCCSCEEEEEETTCSSSCTTHHHHHHHHCC----------------------CSSEEEEEETTCCSSGGGSTTHHHHHHH
T ss_pred eeccccceeecccCCccCHHHHHHHHHHcC----------------------CCCcEEEEECCCCCcCccccCHHHHHHH
Confidence 335799999999999999999888888764 1356789999999999988 58999999
Q ss_pred HHHHHcCC
Q 042005 420 FSSFINGT 427 (432)
Q Consensus 420 ~~~fl~~~ 427 (432)
+.+||+..
T Consensus 233 i~~Fl~~l 240 (242)
T d1tqha_ 233 IYAFLESL 240 (242)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhC
Confidence 99999643
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=98.00 E-value=0.00071 Score=60.15 Aligned_cols=53 Identities=25% Similarity=0.177 Sum_probs=43.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
.++|||.+|..|.+++....+++.+.+. +..++++.+|||.+ ++|+.+-++++
T Consensus 254 ~~Pvlii~G~~D~~~p~~~~~~l~~~~p------------------------~a~~~~i~~aGH~~--~eP~~~~~lv~ 306 (313)
T d1wm1a_ 254 HIPAVIVHGRYDMACQVQNAWDLAKAWP------------------------EAELHIVEGAGHSY--DEPGILHQLMI 306 (313)
T ss_dssp TSCEEEEEETTCSSSCHHHHHHHHHHCT------------------------TSEEEEETTCCSST--TSHHHHHHHHH
T ss_pred CCCEEEEEECCCCccCHHHHHHHHHHCC------------------------CCEEEEECCCCCCc--CCchHHHHHHH
Confidence 5899999999999999988888777653 55779999999974 57987766653
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=97.97 E-value=6.2e-05 Score=70.35 Aligned_cols=61 Identities=15% Similarity=0.105 Sum_probs=50.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccc---ccccChHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHF---VPSYQPARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHm---vP~dqP~~a~~m 419 (432)
.++||++.|+.|.+++...++++.+.+. .......|.++||+ +..|.|+..+.-
T Consensus 313 ~vPvL~i~G~~D~~~~~~~~~~l~~~lp-----------------------~~~~~~~i~~~GH~d~~~~~~a~~~v~~~ 369 (377)
T d1k8qa_ 313 HVPIAVWNGGNDLLADPHDVDLLLSKLP-----------------------NLIYHRKIPPYNHLDFIWAMDAPQAVYNE 369 (377)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHTTCT-----------------------TEEEEEEETTCCTTHHHHCTTHHHHTHHH
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHHCC-----------------------CCeEEEEeCCCCCcchhhccchHHHHHHH
Confidence 5799999999999999999888887764 12356789999998 566889999998
Q ss_pred HHHHHcC
Q 042005 420 FSSFING 426 (432)
Q Consensus 420 ~~~fl~~ 426 (432)
|-+||..
T Consensus 370 I~~fl~~ 376 (377)
T d1k8qa_ 370 IVSMMGT 376 (377)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999854
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=97.80 E-value=0.00032 Score=63.97 Aligned_cols=61 Identities=18% Similarity=0.193 Sum_probs=52.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||.+|..|.+||..+.++..++++ .+-+++.+.++||..+.+.+++.++.|++
T Consensus 258 ~~P~Lii~G~~D~~vp~~~~~~~~~~l~-----------------------~~~~l~~~~~~gH~~~~~~~~~~~~fl~~ 314 (318)
T d1l7aa_ 258 KVPVLMSIGLIDKVTPPSTVFAAYNHLE-----------------------TKKELKVYRYFGHEYIPAFQTEKLAFFKQ 314 (318)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHCC-----------------------SSEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCcCHHHHHHHHHHcC-----------------------CCcEEEEECCCCCCCcHHHHHHHHHHHHH
Confidence 4789999999999999999988888864 23456788999999998999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
+|+|
T Consensus 315 ~LkG 318 (318)
T d1l7aa_ 315 ILKG 318 (318)
T ss_dssp HHCC
T ss_pred hCCC
Confidence 9976
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=97.75 E-value=3.2e-05 Score=67.41 Aligned_cols=55 Identities=24% Similarity=0.332 Sum_probs=43.5
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
.-..+|++..|+.|..+.- ..+. .+.+++++.+|||+++.++|++..+.|
T Consensus 206 ~~~~p~l~i~G~~D~~~~~-----~~~~-------------------------~~~~~~~i~~~gH~~~~e~P~~~~~~i 255 (264)
T d1r3da_ 206 ALKLPIHYVCGEQDSKFQQ-----LAES-------------------------SGLSYSQVAQAGHNVHHEQPQAFAKIV 255 (264)
T ss_dssp TCSSCEEEEEETTCHHHHH-----HHHH-------------------------HCSEEEEETTCCSCHHHHCHHHHHHHH
T ss_pred ccCcceEEEEeCCcHHHHH-----HHhc-------------------------CCCeEEEECCCCCchHHHCHHHHHHHH
Confidence 4468999999999954321 1111 246789999999999999999999999
Q ss_pred HHHHc
Q 042005 421 SSFIN 425 (432)
Q Consensus 421 ~~fl~ 425 (432)
.+||+
T Consensus 256 ~~fl~ 260 (264)
T d1r3da_ 256 QAMIH 260 (264)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99985
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.71 E-value=0.00074 Score=58.78 Aligned_cols=32 Identities=6% Similarity=0.034 Sum_probs=29.0
Q ss_pred cceEEEEEcCCcccccccChHHHHHHHHHHHc
Q 042005 394 QNLTFVTVRGAGHFVPSYQPARALVLFSSFIN 425 (432)
Q Consensus 394 ~nLTf~~V~~AGHmvP~dqP~~a~~m~~~fl~ 425 (432)
+.+++++|.||||++..++|+..-+.|.+||.
T Consensus 237 ~~~~~~~i~g~gH~~~~e~p~~~~~~i~~fLs 268 (268)
T d1pjaa_ 237 GAIVRCPMAGISHTAWHSNRTLYETCIEPWLS 268 (268)
T ss_dssp TCEEEEECSSCCTTTTTSCHHHHHHHTGGGCC
T ss_pred CCcEEEEECCCCCchhhhCHHHHHHHHHHhcC
Confidence 35788999999999999999999999999973
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=97.60 E-value=0.0008 Score=62.28 Aligned_cols=64 Identities=6% Similarity=0.120 Sum_probs=47.9
Q ss_pred HHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHH
Q 042005 336 IQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPAR 415 (432)
Q Consensus 336 l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~ 415 (432)
++.+-+-.++||+.+|+.|.+||....+.++++++ .++-.++++.|+||.+..+ |+.
T Consensus 190 ~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~----------------------s~~~kl~~~~g~~H~l~e~-~~~ 246 (302)
T d1thta_ 190 LDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIR----------------------TGHCKLYSLLGSSHDLGEN-LVV 246 (302)
T ss_dssp HHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCT----------------------TCCEEEEEETTCCSCTTSS-HHH
T ss_pred HHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCC----------------------CCCceEEEecCCCcccccC-hHH
Confidence 34444456899999999999999999999998875 1234669999999998644 555
Q ss_pred HHHHHHH
Q 042005 416 ALVLFSS 422 (432)
Q Consensus 416 a~~m~~~ 422 (432)
...+++.
T Consensus 247 ~~~~~~~ 253 (302)
T d1thta_ 247 LRNFYQS 253 (302)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5444444
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.59 E-value=9.4e-05 Score=66.63 Aligned_cols=64 Identities=11% Similarity=0.086 Sum_probs=47.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc-cChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS-YQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~-dqP~~a~~m~~ 421 (432)
..++||.+|+.|.+||...++++.+.|.=.+ .+..++++.++||.... +.+...++-+.
T Consensus 190 ~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~--------------------~~~~~~~~p~~~H~~~~~~~~~~~~~~~~ 249 (258)
T d1xfda2 190 EQQFLIIHPTADEKIHFQHTAELITQLIRGK--------------------ANYSLQIYPDESHYFTSSSLKQHLYRSII 249 (258)
T ss_dssp SCEEEEEEETTCSSSCHHHHHHHHHHHHHTT--------------------CCCEEEEETTCCSSCCCHHHHHHHHHHHH
T ss_pred cccccccccCCCCCcCHHHHHHHHHHHHHCC--------------------CCEEEEEECCCCCCCCCCcCHHHHHHHHH
Confidence 4699999999999999999988887764000 24677888999997533 34555667777
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+|+..
T Consensus 250 ~f~~~ 254 (258)
T d1xfda2 250 NFFVE 254 (258)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 78853
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.52 E-value=0.0014 Score=58.43 Aligned_cols=73 Identities=15% Similarity=0.126 Sum_probs=48.6
Q ss_pred CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEe-cceEEEEEcCCcccc--cccCh----HHH
Q 042005 344 IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGY-QNLTFVTVRGAGHFV--PSYQP----ARA 416 (432)
Q Consensus 344 irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~-~nLTf~~V~~AGHmv--P~dqP----~~a 416 (432)
-++||.+|+.|..||+..++++.++|+=.+.. .|.. ...-++++.++||=. +.++- ...
T Consensus 201 pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~--------------~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~ 266 (280)
T d1qfma2 201 PSMLLLTADHDDRVVPLHSLKFIATLQYIVGR--------------SRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDM 266 (280)
T ss_dssp CEEEEEEETTCCSSCTHHHHHHHHHHHHHTTT--------------STTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHH
T ss_pred CceEEeecccCCCCCHHHHHHHHHHHHHhhhh--------------hhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHH
Confidence 48999999999999999999999988411110 0111 235678999999943 21221 124
Q ss_pred HHHHHHHHcCCCCC
Q 042005 417 LVLFSSFINGTLPP 430 (432)
Q Consensus 417 ~~m~~~fl~~~~~~ 430 (432)
++.|+++|+.+..|
T Consensus 267 ~~fl~k~L~~~~~~ 280 (280)
T d1qfma2 267 FAFIARCLNIDWIP 280 (280)
T ss_dssp HHHHHHHHTCCCCC
T ss_pred HHHHHHhcCCCCCC
Confidence 56777778776654
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=97.48 E-value=0.0013 Score=56.91 Aligned_cols=81 Identities=7% Similarity=0.052 Sum_probs=52.2
Q ss_pred CCCCCeEEEEcCCCChhhhhHhhhhhcCC-eEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCC
Q 042005 115 SSSKPLVLWLNGGPGFSSFGAGTMMELGP-FRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTR 193 (432)
Q Consensus 115 p~~~PlilWlnGGPGcSSl~~G~f~E~GP-~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~ 193 (432)
..+.|.||.+-|+.|.+.. +-.+.+.=| +.+.. - ++ .+.++.|+++.++|.+. - ...
T Consensus 14 ~~~~~~l~~lhg~~g~~~~-~~~la~~L~~~~v~~-------~------~~--~g~~~~a~~~~~~i~~~---~---~~~ 71 (230)
T d1jmkc_ 14 QDQEQIIFAFPPVLGYGLM-YQNLSSRLPSYKLCA-------F------DF--IEEEDRLDRYADLIQKL---Q---PEG 71 (230)
T ss_dssp TTCSEEEEEECCTTCCGGG-GHHHHHHCTTEEEEE-------E------CC--CCSTTHHHHHHHHHHHH---C---CSS
T ss_pred CCCCCeEEEEcCCCCCHHH-HHHHHHHCCCCEEec-------c------Cc--CCHHHHHHHHHHHHHHh---C---CCC
Confidence 4567899999999998877 554443312 22210 0 12 24557788887777653 2 246
Q ss_pred CeEEEccccccccchHHHHHHHHh
Q 042005 194 DFFIAGESYAGHYIPQLAQAILYN 217 (432)
Q Consensus 194 ~~yI~GESYaG~yvP~lA~~I~~~ 217 (432)
+++|.|+|+||..+-.+|.++-++
T Consensus 72 ~~~lvGhS~GG~vA~~~A~~~~~~ 95 (230)
T d1jmkc_ 72 PLTLFGYSAGCSLAFEAAKKLEGQ 95 (230)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHT
T ss_pred cEEEEeeccChHHHHHHHHhhhhh
Confidence 899999999997666666655443
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.45 E-value=0.00088 Score=59.83 Aligned_cols=63 Identities=14% Similarity=0.117 Sum_probs=48.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccc-cccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFV-PSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmv-P~dqP~~a~~m~~ 421 (432)
+.++|+++|..|.++|...+++..+.|.=.+ ...+++.+.++||-. -.+.++..++.+.
T Consensus 189 ~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g--------------------~~~~~~~~~g~~H~~~~~~~~~~~~~~i~ 248 (258)
T d2bgra2 189 QVEYLLIHGTADDNVHFQQSAQISKALVDVG--------------------VDFQAMWYTDEDHGIASSTAHQHIYTHMS 248 (258)
T ss_dssp GSEEEEEEETTCSSSCTHHHHHHHHHHHHHT--------------------CCCEEEEETTCCTTCCSHHHHHHHHHHHH
T ss_pred cCChheeeecCCCcccHHHHHHHHHHHHHCC--------------------CCEEEEEECCCCCCCCCCccHHHHHHHHH
Confidence 3799999999999999999999998874000 246789999999953 2345667788888
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 249 ~fl~ 252 (258)
T d2bgra2 249 HFIK 252 (258)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8884
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=97.39 E-value=0.0082 Score=56.65 Aligned_cols=121 Identities=17% Similarity=0.194 Sum_probs=72.4
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCCChhh----hhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHH
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSS----FGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARD 175 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGPGcSS----l~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d 175 (432)
++..|..|++..+. +...|+||++.|..|... +. -.|.+.|=-.+..|.+..-..+ .. .........
T Consensus 114 dg~~l~g~l~~P~~-~~~~P~Vi~~hG~~~~~e~~~~~~-~~l~~~G~~vl~~D~~G~G~s~-----~~--~~~~~~~~~ 184 (360)
T d2jbwa1 114 DGIPMPVYVRIPEG-PGPHPAVIMLGGLESTKEESFQME-NLVLDRGMATATFDGPGQGEMF-----EY--KRIAGDYEK 184 (360)
T ss_dssp TTEEEEEEEECCSS-SCCEEEEEEECCSSCCTTTTHHHH-HHHHHTTCEEEEECCTTSGGGT-----TT--CCSCSCHHH
T ss_pred CCcccceEEEecCC-CCCceEEEEeCCCCccHHHHHHHH-HHHHhcCCEEEEEccccccccC-----cc--ccccccHHH
Confidence 35778888875543 456799999988877643 31 4466777644443321100000 00 011111222
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 176 SYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 176 ~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
....+..|+...++....++.|+|.|+||..+..+|. .. -.+++++.-.|+.+.
T Consensus 185 ~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~----~~-------pri~a~V~~~~~~~~ 238 (360)
T d2jbwa1 185 YTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAA----CE-------PRLAACISWGGFSDL 238 (360)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHH----HC-------TTCCEEEEESCCSCS
T ss_pred HHHHHHHHHHhcccccccceeehhhhcccHHHHHHhh----cC-------CCcceEEEEcccccH
Confidence 3344566777888887778999999999976655553 22 247888887777664
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.35 E-value=0.0013 Score=58.11 Aligned_cols=62 Identities=29% Similarity=0.353 Sum_probs=45.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.++|+...++..+.|+ .... -.+++|.+..++||.+.. ...+.+.+
T Consensus 163 ~~Pvli~hG~~D~~vp~~~~~~~~~~L~-------------~~~~-----~~~v~~~~~~g~gH~i~~----~~~~~~~~ 220 (229)
T d1fj2a_ 163 DISILQCHGDCDPLVPLMFGSLTVEKLK-------------TLVN-----PANVTFKTYEGMMHSSCQ----QEMMDVKQ 220 (229)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHH-------------HHSC-----GGGEEEEEETTCCSSCCH----HHHHHHHH
T ss_pred cCceeEEEcCCCCeeCHHHHHHHHHHHH-------------hcCC-----CCceEEEEeCCCCCccCH----HHHHHHHH
Confidence 4799999999999999998888777663 0000 126788889999998743 34566777
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
||..
T Consensus 221 wL~~ 224 (229)
T d1fj2a_ 221 FIDK 224 (229)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8853
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=97.32 E-value=0.0034 Score=53.58 Aligned_cols=58 Identities=14% Similarity=0.146 Sum_probs=42.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..++++.+|..|.+||....++..+.|+=.+ .+.++.+.. +||.++ .+.++.+.+
T Consensus 142 ~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g--------------------~~~~~~~~~-ggH~~~----~~~~~~~~~ 196 (202)
T d2h1ia1 142 GKSVFIAAGTNDPICSSAESEELKVLLENAN--------------------ANVTMHWEN-RGHQLT----MGEVEKAKE 196 (202)
T ss_dssp TCEEEEEEESSCSSSCHHHHHHHHHHHHTTT--------------------CEEEEEEES-STTSCC----HHHHHHHHH
T ss_pred cchhhcccccCCCccCHHHHHHHHHHHHHCC--------------------CCEEEEEEC-CCCcCC----HHHHHHHHH
Confidence 3688999999999999999998888875111 135666665 599885 455666777
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 197 wl~ 199 (202)
T d2h1ia1 197 WYD 199 (202)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=97.30 E-value=0.005 Score=56.14 Aligned_cols=59 Identities=12% Similarity=0.037 Sum_probs=44.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc-cChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS-YQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~-dqP~~a~~m~~ 421 (432)
..+|||.+|..|.+||..+..+..+.++ ..-.++++.++||..+. .+.+..++-++
T Consensus 262 ~~P~Lv~~G~~D~~vp~~~~~~~~~~~~-----------------------~~~~l~~~p~~~H~~~~~~~~~~~~~~l~ 318 (322)
T d1vlqa_ 262 KIPALFSVGLMDNICPPSTVFAAYNYYA-----------------------GPKEIRIYPYNNHEGGGSFQAVEQVKFLK 318 (322)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHCC-----------------------SSEEEEEETTCCTTTTHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCcCHHHHHHHHHHCC-----------------------CCeEEEEECCCCCCCccccCHHHHHHHHH
Confidence 4799999999999999999888888764 12356888999997643 35555666666
Q ss_pred HHH
Q 042005 422 SFI 424 (432)
Q Consensus 422 ~fl 424 (432)
++|
T Consensus 319 ~~l 321 (322)
T d1vlqa_ 319 KLF 321 (322)
T ss_dssp HHH
T ss_pred HHh
Confidence 665
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=97.21 E-value=0.00025 Score=62.34 Aligned_cols=60 Identities=17% Similarity=0.176 Sum_probs=52.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+..|+.|.+++....++.+.++. .+.++.++.+|||+++.++|+...+.+.+
T Consensus 211 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 267 (271)
T d1va4a_ 211 DVPTLVIHGDGDQIVPFETTGKVAAELI-----------------------KGAELKVYKDAPHGFAVTHAQQLNEDLLA 267 (271)
T ss_dssp CSCEEEEEETTCSSSCGGGTHHHHHHHS-----------------------TTCEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred ccceeecccCCCCCCCHHHHHHHHHHhC-----------------------CCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 6899999999999999988877776542 24567889999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
||+
T Consensus 268 fL~ 270 (271)
T d1va4a_ 268 FLK 270 (271)
T ss_dssp HHT
T ss_pred HHC
Confidence 996
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=97.00 E-value=0.035 Score=48.54 Aligned_cols=58 Identities=17% Similarity=0.147 Sum_probs=45.5
Q ss_pred CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHHH
Q 042005 344 IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSF 423 (432)
Q Consensus 344 irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~f 423 (432)
.+||+.+|+.|.+||..-.+++.+++. ..-.+++|.||||+-- .+-+...+.+.+|
T Consensus 154 ~P~Lvi~G~~D~~vp~~~~~~l~~~~~-----------------------~~~~l~~i~ga~H~f~-~~~~~l~~~~~~~ 209 (218)
T d2fuka1 154 AQWLVIQGDADEIVDPQAVYDWLETLE-----------------------QQPTLVRMPDTSHFFH-RKLIDLRGALQHG 209 (218)
T ss_dssp SSEEEEEETTCSSSCHHHHHHHHTTCS-----------------------SCCEEEEETTCCTTCT-TCHHHHHHHHHHH
T ss_pred cceeeEecCCCcCcCHHHHHHHHHHcc-----------------------CCceEEEeCCCCCCCC-CCHHHHHHHHHHH
Confidence 489999999999999998888887764 1235689999999743 4445677888888
Q ss_pred Hc
Q 042005 424 IN 425 (432)
Q Consensus 424 l~ 425 (432)
+.
T Consensus 210 v~ 211 (218)
T d2fuka1 210 VR 211 (218)
T ss_dssp HG
T ss_pred HH
Confidence 85
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=96.96 E-value=0.00031 Score=60.89 Aligned_cols=59 Identities=10% Similarity=0.113 Sum_probs=50.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.+++++..|+.|.+++....+.+.+.+ .+..++++.+|||+++.++|++..+.|.+
T Consensus 195 ~~P~l~i~G~~D~~~~~~~~~~~~~~~------------------------p~~~~~~i~~agH~~~~e~P~~~~~~l~~ 250 (256)
T d3c70a1 195 SIKKIYVWTDQDEIFLPEFQLWQIENY------------------------KPDKVYKVEGGDHKLQLTKTKEIAEILQE 250 (256)
T ss_dssp GSCEEEEECTTCSSSCHHHHHHHHHHS------------------------CCSEEEECCSCCSCHHHHSHHHHHHHHHH
T ss_pred ccceeEEeecCCCCCCHHHHHHHHHHC------------------------CCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 479999999999999987666666554 35677999999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|++
T Consensus 251 ~~~ 253 (256)
T d3c70a1 251 VAD 253 (256)
T ss_dssp HHH
T ss_pred HHH
Confidence 985
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=96.85 E-value=0.0033 Score=59.98 Aligned_cols=98 Identities=17% Similarity=0.139 Sum_probs=59.0
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhh---HhhhhhcC-----CeEEcCCCCeeecCCCCCCCC---CcccCC
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFG---AGTMMELG-----PFRVNKDGKTLYQNEYAWNKD---YKVNGD 169 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~---~G~f~E~G-----P~~~~~~~~~l~~N~~SW~~~---~~~~~~ 169 (432)
|-.++|....+. ..+.|.||.|-|=||++-.- +..|.+.| +|++- .+...-|.++.. ....+.
T Consensus 91 G~~iHf~h~~~~--~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VI----aPDLpG~G~S~~P~~~~~y~~ 164 (394)
T d1qo7a_ 91 GLTIHFAALFSE--REDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLV----VPSLPGYTFSSGPPLDKDFGL 164 (394)
T ss_dssp TEEEEEEEECCS--CTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEE----EECCTTSTTSCCCCSSSCCCH
T ss_pred CEEEEEEEEecc--CCCCCEEEEeccccccHHHHHHHHHhhccccCCcccceeee----cccccccCCCCCCCCCCccCH
Confidence 678999877664 45778888899999998641 35666666 58763 112222333321 011233
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHH
Q 042005 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLA 211 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA 211 (432)
...|.++..++. . +...+.++.|+|.||..+-.+|
T Consensus 165 ~~~a~~~~~l~~----~---lg~~~~~~vg~~~Gg~v~~~~a 199 (394)
T d1qo7a_ 165 MDNARVVDQLMK----D---LGFGSGYIIQGGDIGSFVGRLL 199 (394)
T ss_dssp HHHHHHHHHHHH----H---TTCTTCEEEEECTHHHHHHHHH
T ss_pred HHHHHHHHHHHh----h---ccCcceEEEEecCchhHHHHHH
Confidence 455555555444 2 2345789999999995444444
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=96.75 E-value=0.00064 Score=58.46 Aligned_cols=60 Identities=12% Similarity=0.252 Sum_probs=50.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|++..|..|.++|....+.+.+.+ ++..++++.+|||+++.++|++..+.|.+
T Consensus 197 ~~P~l~i~g~~D~~~~~~~~~~~~~~~------------------------~~~~~~~i~~~gH~~~~e~P~~~~~~l~e 252 (258)
T d1xkla_ 197 SVKRVYIVCTEDKGIPEEFQRWQIDNI------------------------GVTEAIEIKGADHMAMLCEPQKLCASLLE 252 (258)
T ss_dssp GSCEEEEEETTCTTTTHHHHHHHHHHH------------------------CCSEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred ccceeEeeecCCCCCCHHHHHHHHHHC------------------------CCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 479999999999999987666666554 35677899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|++.
T Consensus 253 ~~~k 256 (258)
T d1xkla_ 253 IAHK 256 (258)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9853
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.66 E-value=0.016 Score=49.24 Aligned_cols=58 Identities=21% Similarity=0.307 Sum_probs=42.8
Q ss_pred CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHHH
Q 042005 344 IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSF 423 (432)
Q Consensus 344 irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~f 423 (432)
.++++.+|+.|.+||...+++..+.|+= .| ...+|.+.. .||.++ .+..+.+++|
T Consensus 144 ~~~~i~hG~~D~~vp~~~~~~~~~~L~~---------------~g-----~~v~~~~~~-ggH~~~----~~~~~~~~~w 198 (203)
T d2r8ba1 144 RRVLITAGERDPICPVQLTKALEESLKA---------------QG-----GTVETVWHP-GGHEIR----SGEIDAVRGF 198 (203)
T ss_dssp CEEEEEEETTCTTSCHHHHHHHHHHHHH---------------HS-----SEEEEEEES-SCSSCC----HHHHHHHHHH
T ss_pred chhhccccCCCCcccHHHHHHHHHHHHH---------------CC-----CCEEEEEEC-CCCcCC----HHHHHHHHHH
Confidence 5889999999999999999888888750 11 124566655 589976 3456778899
Q ss_pred HcC
Q 042005 424 ING 426 (432)
Q Consensus 424 l~~ 426 (432)
|..
T Consensus 199 l~~ 201 (203)
T d2r8ba1 199 LAA 201 (203)
T ss_dssp HGG
T ss_pred HHh
Confidence 853
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=96.49 E-value=0.0034 Score=54.28 Aligned_cols=120 Identities=13% Similarity=0.163 Sum_probs=68.0
Q ss_pred EEEEEEEcCCCCCCCCeEEEEcCCCChh-hhhHhhhhhcCC-e-EEcCCCCeeecCCCCCCC--CCcccCC---hhhHHH
Q 042005 104 LFYYFVESPQNSSSKPLVLWLNGGPGFS-SFGAGTMMELGP-F-RVNKDGKTLYQNEYAWNK--DYKVNGD---IRTARD 175 (432)
Q Consensus 104 lFywf~es~~~p~~~PlilWlnGGPGcS-Sl~~G~f~E~GP-~-~~~~~~~~l~~N~~SW~~--~~~~~~~---~~~a~d 175 (432)
+-|-+.++ ..++.|+||+|-|..|-. ++ ..+..++.| + .+-.++.....+-+.|.. .....+. ...+.+
T Consensus 11 ~~~~~~~~--~~~~~p~vv~lHG~g~~~~~~-~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (209)
T d3b5ea1 11 FPYRLLGA--GKESRECLFLLHGSGVDETTL-VPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAA 87 (209)
T ss_dssp SCEEEEST--TSSCCCEEEEECCTTBCTTTT-HHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHH
T ss_pred ceeEecCC--CCCCCCEEEEEcCCCCCHHHH-HHHHHHhccCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHH
Confidence 33445544 335689999999988743 34 245455544 1 122233223333444544 1111111 233455
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 176 SYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 176 ~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
+.++|....+++ .....+++|+|.|.|| .+|.++..+... .++++++-+|.
T Consensus 88 l~~~l~~~~~~~-~id~~ri~l~G~S~Gg----~~a~~~a~~~p~------~~~~~v~~~g~ 138 (209)
T d3b5ea1 88 FAAFTNEAAKRH-GLNLDHATFLGYSNGA----NLVSSLMLLHPG------IVRLAALLRPM 138 (209)
T ss_dssp HHHHHHHHHHHH-TCCGGGEEEEEETHHH----HHHHHHHHHSTT------SCSEEEEESCC
T ss_pred HHHHHHHHHHHh-CcccCCEEEEeeCChH----HHHHHHHHhCCC------cceEEEEeCCc
Confidence 667777776655 3455789999999999 566666655432 37777776664
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=96.48 E-value=0.014 Score=52.11 Aligned_cols=64 Identities=22% Similarity=0.382 Sum_probs=42.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHH----HHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPAR----ALV 418 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~----a~~ 418 (432)
..++|+.+|..|.++|.....+++.++.= ++ ..-.++++.||||..+...-.. ++.
T Consensus 164 ~~P~l~i~G~~D~~vp~~~~~~~~~~~~~---------------~~-----~~~~~~~i~ga~H~~~~~~~~~~~~~~~~ 223 (260)
T d1jfra_ 164 RTPTLVVGADGDTVAPVATHSKPFYESLP---------------GS-----LDKAYLELRGASHFTPNTSDTTIAKYSIS 223 (260)
T ss_dssp CSCEEEEEETTCSSSCTTTTHHHHHHHSC---------------TT-----SCEEEEEETTCCTTGGGSCCHHHHHHHHH
T ss_pred ccceeEEecCCCCCCCHHHHHHHHHHhcc---------------cC-----CCEEEEEECCCccCCCCCChHHHHHHHHH
Confidence 47899999999999998776666644320 00 1234688999999986655433 345
Q ss_pred HHHHHHcC
Q 042005 419 LFSSFING 426 (432)
Q Consensus 419 m~~~fl~~ 426 (432)
-|+++|.+
T Consensus 224 wl~~~L~~ 231 (260)
T d1jfra_ 224 WLKRFIDS 231 (260)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhcC
Confidence 55666654
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.47 E-value=0.029 Score=48.44 Aligned_cols=84 Identities=14% Similarity=0.144 Sum_probs=47.8
Q ss_pred CCCCCCeEEEEcCCCChhhhhHhhhhh-cC-CeE-EcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCC
Q 042005 114 NSSSKPLVLWLNGGPGFSSFGAGTMME-LG-PFR-VNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEY 190 (432)
Q Consensus 114 ~p~~~PlilWlnGGPGcSSl~~G~f~E-~G-P~~-~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~ 190 (432)
+++.+| |+.+-|+||.+.. +--+.+ .+ |+. ++.-|. +.. .+-++.|++....+.. ..+
T Consensus 22 ~~~~~P-l~l~Hg~~gs~~~-~~~l~~~L~~~v~~~d~~g~-----------~~~-~~~~~~a~~~~~~~~~---~~~-- 82 (286)
T d1xkta_ 22 QSSERP-LFLVHPIEGSTTV-FHSLASRLSIPTYGLQCTRA-----------APL-DSIHSLAAYYIDCIRQ---VQP-- 82 (286)
T ss_dssp CCCSCC-EEEECCTTCCCGG-GHHHHHTCSSCEEEECCCTT-----------SCC-SCHHHHHHHHHHHHHH---HCC--
T ss_pred CCCCCe-EEEECCCCccHHH-HHHHHHHcCCeEEEEeCCCC-----------CCC-CCHHHHHHHHHHHHHH---hcC--
Confidence 445667 5699999999876 554443 21 211 111110 011 1234555555554443 332
Q ss_pred CCCCeEEEccccccccchHHHHHHHHh
Q 042005 191 KTRDFFIAGESYAGHYIPQLAQAILYN 217 (432)
Q Consensus 191 ~~~~~yI~GESYaG~yvP~lA~~I~~~ 217 (432)
..+++|.|+|+||..+-.+|...-++
T Consensus 83 -~~~~~lvGhS~Gg~vA~~~A~~~p~~ 108 (286)
T d1xkta_ 83 -EGPYRVAGYSYGACVAFEMCSQLQAQ 108 (286)
T ss_dssp -SSCCEEEEETHHHHHHHHHHHHHHHC
T ss_pred -CCceEEeecCCccHHHHHHHHHHHHc
Confidence 36899999999997666666655554
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=95.39 E-value=0.0057 Score=54.99 Aligned_cols=64 Identities=17% Similarity=0.210 Sum_probs=45.4
Q ss_pred CCeEEEEecCCccccCchh-----HHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEE-----EcCCcccccccC
Q 042005 343 GIRIWVYSGDTDGALPVTC-----TRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVT-----VRGAGHFVPSYQ 412 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~G-----t~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~-----V~~AGHmvP~dq 412 (432)
.+++|+.+|+.|.++|... .+.+.+.|+=.+ .+.+++. ++|+|||+.+|+
T Consensus 241 ~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g--------------------~~~~~~~lp~~gi~G~gH~~~~e~ 300 (318)
T d1qlwa_ 241 SIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAG--------------------GKGQLMSLPALGVHGNSHMMMQDR 300 (318)
T ss_dssp TSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTT--------------------CCEEEEEGGGGTCCCCCTTGGGST
T ss_pred cCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhC--------------------CCcEEEEecccccCCCcCccccCc
Confidence 5899999999999998533 333444432000 1234444 568999999998
Q ss_pred h-HHHHHHHHHHHcC
Q 042005 413 P-ARALVLFSSFING 426 (432)
Q Consensus 413 P-~~a~~m~~~fl~~ 426 (432)
+ ++..+.|.+||+.
T Consensus 301 ~~~~va~~i~~wL~~ 315 (318)
T d1qlwa_ 301 NNLQVADLILDWIGR 315 (318)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 6 8999999999964
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=94.82 E-value=0.016 Score=49.93 Aligned_cols=66 Identities=17% Similarity=0.305 Sum_probs=49.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..++||.+|..|.+|++..++++.+.|+=.+. -.++.+.+..|+||.+.-+.-++..+.|++
T Consensus 172 ~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~------------------~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~ 233 (238)
T d1ufoa_ 172 GVPLLHLHGSRDHIVPLARMEKTLEALRPHYP------------------EGRLARFVEEGAGHTLTPLMARVGLAFLEH 233 (238)
T ss_dssp TCCEEEEEETTCTTTTHHHHHHHHHHHGGGCT------------------TCCEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCCCCccCHHHHHHHHHHHHhcCC------------------CceEEEEEECCCCCccCHHHHHHHHHHHHH
Confidence 36899999999999999999998888741111 136888999999999864444555566777
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+.+
T Consensus 234 ~l~~ 237 (238)
T d1ufoa_ 234 WLEA 237 (238)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 7754
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=94.75 E-value=0.03 Score=46.42 Aligned_cols=58 Identities=14% Similarity=0.274 Sum_probs=47.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccccc---ChHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSY---QPARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~d---qP~~a~~m 419 (432)
..+||+++|+.|.+||+.-++.+.++++ -.++++.+|||+.+.+ +-.++++.
T Consensus 125 ~~p~lvi~g~~D~~vp~~~~~~l~~~~~-------------------------~~~~~~~~~gH~~~~~~~~~~~~~~~~ 179 (186)
T d1uxoa_ 125 AKHRAVIASKDDQIVPFSFSKDLAQQID-------------------------AALYEVQHGGHFLEDEGFTSLPIVYDV 179 (186)
T ss_dssp EEEEEEEEETTCSSSCHHHHHHHHHHTT-------------------------CEEEEETTCTTSCGGGTCSCCHHHHHH
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHcC-------------------------CEEEEeCCCCCcCccccCcccHHHHHH
Confidence 4799999999999999988888877753 2468899999988654 33468888
Q ss_pred HHHHHc
Q 042005 420 FSSFIN 425 (432)
Q Consensus 420 ~~~fl~ 425 (432)
+++|+.
T Consensus 180 l~~~~~ 185 (186)
T d1uxoa_ 180 LTSYFS 185 (186)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 999985
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=94.60 E-value=0.063 Score=48.33 Aligned_cols=59 Identities=12% Similarity=0.113 Sum_probs=41.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEe-cceEEEEEcCCccccc-ccChHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGY-QNLTFVTVRGAGHFVP-SYQPARALVLF 420 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~-~nLTf~~V~~AGHmvP-~dqP~~a~~m~ 420 (432)
..+|+++.|..|..++..... .|+. .. +.++++.|.| ||+.. .+.|+...+.|
T Consensus 221 ~~Pvl~i~g~~d~~~~~~~~~------------~w~~------------~~~~~~~~~~v~G-~H~~ml~e~~~~vA~~i 275 (283)
T d2h7xa1 221 SAPVLLVRASEPLGDWQEERG------------DWRA------------HWDLPHTVADVPG-DHFTMMRDHAPAVAEAV 275 (283)
T ss_dssp CSCEEEEEESSCSSCCCGGGC------------CCSC------------CCSSCSEEEEESS-CTTHHHHTTHHHHHHHH
T ss_pred CCCeEEEEeCCCCCCCHHHHH------------HHHH------------hCCCCcEEEEEcC-CCcccccCCHHHHHHHH
Confidence 478999999999887753321 1111 11 2467788876 89854 46799999999
Q ss_pred HHHHcC
Q 042005 421 SSFING 426 (432)
Q Consensus 421 ~~fl~~ 426 (432)
++||..
T Consensus 276 ~~~L~~ 281 (283)
T d2h7xa1 276 LSWLDA 281 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999853
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.15 E-value=0.18 Score=44.93 Aligned_cols=131 Identities=16% Similarity=0.068 Sum_probs=69.0
Q ss_pred eEEec-CCCCceEEEEEEEcCCCCCCCCeEEEEcCCCCh---hh------hhHhhhhhcCCeEEcCCCCeeecCCCCCCC
Q 042005 93 YVNVD-SQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGF---SS------FGAGTMMELGPFRVNKDGKTLYQNEYAWNK 162 (432)
Q Consensus 93 yl~v~-~~~~~~lFywf~es~~~p~~~PlilWlnGGPGc---SS------l~~G~f~E~GP~~~~~~~~~l~~N~~SW~~ 162 (432)
|++|. +..++.+-..+. .. ....|||++|.|++|. ++ +. -++.+.|=..+-.+.. ....-..|..
T Consensus 11 ~~~~~s~~~~r~~~~~v~-~p--~~~~Pvl~llhG~~~~~d~~~~~~~~~~~-~~~~~~~~~~v~~~~~-~~~~~~~~~~ 85 (288)
T d1sfra_ 11 YLQVPSPSMGRDIKVQFQ-SG--GANSPALYLLDGLRAQDDFSGWDINTPAF-EWYDQSGLSVVMPVGG-QSSFYSDWYQ 85 (288)
T ss_dssp EEEEEETTTTEEEEEEEE-CC--STTBCEEEEECCTTCCSSSCHHHHHCCHH-HHHTTSSCEEEEECCC-TTCTTCBCSS
T ss_pred EEEEECCCCCcEEEEEEe-CC--CCCceEEEEcCCCCCCCcchhhhhhccHH-HHHHhCCCEEEEeccC-CCCCCccccC
Confidence 45553 334555544443 32 3578999999998763 22 21 2344444333333221 1111111111
Q ss_pred C-C----c--ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecc
Q 042005 163 D-Y----K--VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGN 235 (432)
Q Consensus 163 ~-~----~--~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGN 235 (432)
. + . ...+.-.++++..+|++=|..- ...++|+|.|+|| +.|..+.-+... .+++++..+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d----~~r~~i~G~S~GG----~~A~~~a~~~pd------~f~av~~~S 151 (288)
T d1sfra_ 86 PACGKAGCQTYKWETFLTSELPGWLQANRHVK----PTGSAVVGLSMAA----SSALTLAIYHPQ------QFVYAGAMS 151 (288)
T ss_dssp CEEETTEEECCBHHHHHHTHHHHHHHHHHCBC----SSSEEEEEETHHH----HHHHHHHHHCTT------TEEEEEEES
T ss_pred cccccccccchhHHHHHHHHhHHHHHHhcCCC----CCceEEEEEccHH----HHHHHHHHhccc------cccEEEEec
Confidence 0 0 0 0112234556666665544332 3358999999999 677666555432 478888888
Q ss_pred ccccccc
Q 042005 236 ALIDLET 242 (432)
Q Consensus 236 g~idp~~ 242 (432)
|.+++..
T Consensus 152 g~~~~~~ 158 (288)
T d1sfra_ 152 GLLDPSQ 158 (288)
T ss_dssp CCSCTTS
T ss_pred Ccccccc
Confidence 8887654
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=93.95 E-value=0.048 Score=48.77 Aligned_cols=105 Identities=15% Similarity=0.122 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCCChh-------hhhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCC
Q 042005 117 SKPLVLWLNGGPGFS-------SFGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPE 189 (432)
Q Consensus 117 ~~PlilWlnGGPGcS-------Sl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~ 189 (432)
..|+|||+-||+=.+ .+. -.|.+.|=-.+..+ .++. - ...-.+..+|...+++-..+..|
T Consensus 61 ~~P~vv~iHGG~w~~g~~~~~~~~a-~~l~~~G~~Vv~~~-YRl~-------p---~~~~p~~~~d~~~a~~~~~~~~~- 127 (261)
T d2pbla1 61 PVGLFVFVHGGYWMAFDKSSWSHLA-VGALSKGWAVAMPS-YELC-------P---EVRISEITQQISQAVTAAAKEID- 127 (261)
T ss_dssp CSEEEEEECCSTTTSCCGGGCGGGG-HHHHHTTEEEEEEC-CCCT-------T---TSCHHHHHHHHHHHHHHHHHHSC-
T ss_pred CCCeEEEECCCCCccCChhHhhhHH-HHHhcCCceeeccc-cccc-------c---cccCchhHHHHHHHHHHHHhccc-
Confidence 579999999996221 132 44556662222222 1111 0 11223456677777766666665
Q ss_pred CCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 190 YKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 190 ~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
.+++|+|+|+||+ +|..++............++|++...|..+..
T Consensus 128 ---~rI~l~G~SaGG~----la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (261)
T d2pbla1 128 ---GPIVLAGHSAGGH----LVARMLDPEVLPEAVGARIRNVVPISPLSDLR 172 (261)
T ss_dssp ---SCEEEEEETHHHH----HHHHTTCTTTSCHHHHTTEEEEEEESCCCCCG
T ss_pred ---CceEEEEcchHHH----HHHHHhcCcccccchhhchhhhhccccccccc
Confidence 4799999999995 55444433211112234588888888876653
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=91.91 E-value=0.31 Score=45.08 Aligned_cols=131 Identities=11% Similarity=0.059 Sum_probs=71.0
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCC---CChh------hhhHhhhhhcCCeEEcCCCCeeec---CCCCCCCCCcccC
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGG---PGFS------SFGAGTMMELGPFRVNKDGKTLYQ---NEYAWNKDYKVNG 168 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGG---PGcS------Sl~~G~f~E~GP~~~~~~~~~l~~---N~~SW~~~~~~~~ 168 (432)
+..+--+.|.-.+.....|+|||+-|| .|.. .+ .-.+.+.|=..+..+ ..+.. .++. +.
T Consensus 89 g~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~-~~~la~~g~~Vvsvd-YRla~~~~pe~~----~p--- 159 (358)
T d1jkma_ 89 GNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRW-CTDLAAAGSVVVMVD-FRNAWTAEGHHP----FP--- 159 (358)
T ss_dssp SCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHH-HHHHHHTTCEEEEEE-CCCSEETTEECC----TT---
T ss_pred CCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchH-HHHHHhhhheeeeee-ecccccccccCC----Cc---
Confidence 455655555444444567999999999 3321 12 234555664433322 11110 0111 11
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhh
Q 042005 169 DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGT 247 (432)
Q Consensus 169 ~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~ 247 (432)
..-+|.+..++-..+...++..+++.|+|+|.||+.+-.+|....+.. ....++++.+..|+++......++
T Consensus 160 --~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~ 231 (358)
T d1jkma_ 160 --SGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRG-----RLDAIDGVYASIPYISGGYAWDHE 231 (358)
T ss_dssp --HHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTT-----CGGGCSEEEEESCCCCCCTTSCHH
T ss_pred --hhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcC-----CCccccccccccceeccccCccch
Confidence 233344443332222222344467999999999976666665544332 124578888889988876554443
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=91.45 E-value=0.22 Score=41.09 Aligned_cols=55 Identities=20% Similarity=0.193 Sum_probs=40.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
+++++.+.|+.|.+++...+ .+ .+-+-+.+.++||+.-...| ++.+++.+
T Consensus 121 ~~~~~~i~~~~D~~v~~~~~-----~l------------------------~~~~~~~~~~~~H~~l~~~~-~v~~~i~~ 170 (179)
T d1ispa_ 121 KILYTSIYSSADMIVMNYLS-----RL------------------------DGARNVQIHGVGHIGLLYSS-QVNSLIKE 170 (179)
T ss_dssp CCEEEEEEETTCSSSCHHHH-----CC------------------------BTSEEEEESSCCTGGGGGCH-HHHHHHHH
T ss_pred CceEEEEEecCCcccCchhh-----cC------------------------CCceEEEECCCCchhhccCH-HHHHHHHH
Confidence 57889999999999986432 11 12233678999999877777 67888999
Q ss_pred HHcCC
Q 042005 423 FINGT 427 (432)
Q Consensus 423 fl~~~ 427 (432)
||.+.
T Consensus 171 ~L~~~ 175 (179)
T d1ispa_ 171 GLNGG 175 (179)
T ss_dssp HHTTT
T ss_pred HHhcc
Confidence 98754
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.39 E-value=0.68 Score=40.83 Aligned_cols=129 Identities=15% Similarity=0.085 Sum_probs=70.3
Q ss_pred eEEec-CCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChh--hh------hHhhhhhcCCeEEcCCCCeeecCCCCCCC-
Q 042005 93 YVNVD-SQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFS--SF------GAGTMMELGPFRVNKDGKTLYQNEYAWNK- 162 (432)
Q Consensus 93 yl~v~-~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcS--Sl------~~G~f~E~GP~~~~~~~~~l~~N~~SW~~- 162 (432)
|++|. +..++++--.+ + +...|+|..|.|.+|.- +. ..-.+.|.|=..|-+++..-. .-..|..
T Consensus 8 ~~~~~s~~~~r~i~~~~-~----~~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~-~~~~~~~~ 81 (280)
T d1dqza_ 8 YLQVPSASMGRDIKVQF-Q----GGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSS-FYTDWYQP 81 (280)
T ss_dssp EEEEEETTTTEEEEEEE-E----CCSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTC-TTSBCSSS
T ss_pred EEEEecccCCCcceEEe-e----CCCCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCC-cCccccCC
Confidence 67774 34466653332 2 34679999999987742 11 002344444334444431100 0111322
Q ss_pred CC-cc-c----CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccc
Q 042005 163 DY-KV-N----GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNA 236 (432)
Q Consensus 163 ~~-~~-~----~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 236 (432)
+. .. . -+.-..+++..+|++-|.. ..+..+|+|.|+|| +.|.++.-+... .+++++..+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~el~~~i~~~~~~----d~~r~~i~G~SmGG----~~Al~lA~~~Pd------~F~av~s~SG 147 (280)
T d1dqza_ 82 SQSNGQNYTYKWETFLTREMPAWLQANKGV----SPTGNAAVGLSMSG----GSALILAAYYPQ------QFPYAASLSG 147 (280)
T ss_dssp CTTTTCCSCCBHHHHHHTHHHHHHHHHHCC----CSSSCEEEEETHHH----HHHHHHHHHCTT------TCSEEEEESC
T ss_pred cccccCCcchhHHHHHHHHHHHHHHHhcCC----CCCceEEEEechHH----HHHHHHHHhCcC------ceeEEEEecC
Confidence 11 00 0 1123466677777665533 33458999999999 677666655432 4788888888
Q ss_pred ccccc
Q 042005 237 LIDLE 241 (432)
Q Consensus 237 ~idp~ 241 (432)
.+++.
T Consensus 148 ~~~~~ 152 (280)
T d1dqza_ 148 FLNPS 152 (280)
T ss_dssp CCCTT
T ss_pred ccCcc
Confidence 87654
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=91.23 E-value=0.045 Score=49.45 Aligned_cols=125 Identities=14% Similarity=0.113 Sum_probs=62.3
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChh-------hhhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhH
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFS-------SFGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTA 173 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcS-------Sl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a 173 (432)
+..+--..|.-++...+.|+|||+-||-=++ .+ .-.+.+-|.+.+-. -.|...... .-....
T Consensus 55 g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~-~~~~a~~~~~~v~~-------v~Yrl~p~~---~~p~~~ 123 (308)
T d1u4na_ 55 GRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLETHDPV-CRVLAKDGRAVVFS-------VDYRLAPEH---KFPAAV 123 (308)
T ss_dssp TEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHH-HHHHHHHHTSEEEE-------ECCCCTTTS---CTTHHH
T ss_pred CceEEEEEEeccccCCCCCEEEEEecCeeeeeccccccch-hhhhhhcccccccc-------ccccccccc---cccccc
Confidence 4555555554443344679999999993111 11 12334444443311 112221111 111233
Q ss_pred HHHHHHHHHHHHHCCCC--CCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc
Q 042005 174 RDSYTFLVSWLARFPEY--KTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET 242 (432)
Q Consensus 174 ~d~~~fL~~F~~~fP~~--~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~ 242 (432)
+|....++-..+.-.++ ....++|.|+|+||+.+..++....+.. ...+.+..+..++.+...
T Consensus 124 ~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 188 (308)
T d1u4na_ 124 EDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERG------GPALAFQLLIYPSTGYDP 188 (308)
T ss_dssp HHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHT------CCCCCCEEEESCCCCCCT
T ss_pred chhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhcc------CCCccccccccccccccc
Confidence 44444443333222222 2345999999999987766665544432 234566666666665443
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=90.16 E-value=0.059 Score=49.14 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=33.9
Q ss_pred CCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccc
Q 042005 192 TRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMM 244 (432)
Q Consensus 192 ~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~ 244 (432)
..++.|+|+|+||+.+..++....+.. .....+.++..|+++.....
T Consensus 151 ~~ri~v~G~SaGG~la~~~~~~~~~~~------~~~~~~~~l~~p~~~~~~~~ 197 (311)
T d1jjia_ 151 PSKIFVGGDSAGGNLAAAVSIMARDSG------EDFIKHQILIYPVVNFVAPT 197 (311)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTT------CCCEEEEEEESCCCCSSSCC
T ss_pred hhHEEEEeeecCCcceeechhhhhhcc------ccccceeeeecceeeeccCc
Confidence 356999999999987777766655442 34567778888888865443
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=89.91 E-value=0.26 Score=41.88 Aligned_cols=58 Identities=17% Similarity=0.204 Sum_probs=42.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
+++|++.+|+.|.+||....++..+.|+=.+ -+.+|... +.||.++ .+.++-+.+
T Consensus 157 ~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g--------------------~~~~~~~~-~~gH~i~----~~~~~~i~~ 211 (218)
T d1auoa_ 157 RIPALCLHGQYDDVVQNAMGRSAFEHLKSRG--------------------VTVTWQEY-PMGHEVL----PQEIHDIGA 211 (218)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHTTT--------------------CCEEEEEE-SCSSSCC----HHHHHHHHH
T ss_pred CCCEEEEecCCCCccCHHHHHHHHHHHHHCC--------------------CCEEEEEE-CCCCccC----HHHHHHHHH
Confidence 4799999999999999999888888775111 14566654 5899875 345667888
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
||.
T Consensus 212 wl~ 214 (218)
T d1auoa_ 212 WLA 214 (218)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=88.84 E-value=0.96 Score=35.11 Aligned_cols=95 Identities=15% Similarity=0.155 Sum_probs=47.7
Q ss_pred EeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCCh
Q 042005 91 SGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDI 170 (432)
Q Consensus 91 sGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~ 170 (432)
+||++++ +.+++|.-.- +-|.||.+-|.++ .. .-.+.+. |++- .+...-+..+... ..+.+
T Consensus 3 ~~~~~~~---G~~l~y~~~G------~G~pvlllHG~~~--~w-~~~L~~~--yrvi----~~DlpG~G~S~~p-~~s~~ 63 (122)
T d2dsta1 3 AGYLHLY---GLNLVFDRVG------KGPPVLLVAEEAS--RW-PEALPEG--YAFY----LLDLPGYGRTEGP-RMAPE 63 (122)
T ss_dssp EEEEEET---TEEEEEEEEC------CSSEEEEESSSGG--GC-CSCCCTT--SEEE----EECCTTSTTCCCC-CCCHH
T ss_pred ceEEEEC---CEEEEEEEEc------CCCcEEEEecccc--cc-cccccCC--eEEE----EEeccccCCCCCc-ccccc
Confidence 8999996 5889886553 2366777887321 11 1111110 1110 0111112222111 12334
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHH
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLA 211 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA 211 (432)
+.|++ +..|++.. .-.+.+|.|+|.||.....+|
T Consensus 64 ~~a~~----i~~ll~~L---~i~~~~viG~S~Gg~ia~~la 97 (122)
T d2dsta1 64 ELAHF----VAGFAVMM---NLGAPWVLLRGLGLALGPHLE 97 (122)
T ss_dssp HHHHH----HHHHHHHT---TCCSCEEEECGGGGGGHHHHH
T ss_pred hhHHH----HHHHHHHh---CCCCcEEEEeCccHHHHHHHH
Confidence 44554 45555544 234679999999996555554
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=88.79 E-value=2.1 Score=36.67 Aligned_cols=38 Identities=8% Similarity=-0.157 Sum_probs=25.3
Q ss_pred CCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 193 RDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 193 ~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
..++|+|.|+|| .+|..+.-+... .++.++..+|..++
T Consensus 144 ~~~~i~G~S~GG----~~a~~~a~~~pd------~f~a~~~~sg~~~~ 181 (273)
T d1wb4a1 144 MHRGFGGFAMGG----LTTWYVMVNCLD------YVAYFMPLSGDYWY 181 (273)
T ss_dssp GGEEEEEETHHH----HHHHHHHHHHTT------TCCEEEEESCCCCB
T ss_pred cceEEEeeCCcc----hhhhhhhhcCCC------cceEEEEeCccccc
Confidence 358999999999 555555433321 36778777776544
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=86.44 E-value=0.91 Score=38.50 Aligned_cols=63 Identities=22% Similarity=0.225 Sum_probs=51.0
Q ss_pred CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHHH
Q 042005 344 IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSF 423 (432)
Q Consensus 344 irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~f 423 (432)
..+|+.+|..|.+++...+..+.+.+++... .+.++.+|.||+|+-- .+-++..+.+.+|
T Consensus 146 ~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~-------------------~~~~~~vi~gAdHfF~-g~~~~l~~~v~~~ 205 (218)
T d2i3da1 146 SSGLIINGDADKVAPEKDVNGLVEKLKTQKG-------------------ILITHRTLPGANHFFN-GKVDELMGECEDY 205 (218)
T ss_dssp SCEEEEEETTCSSSCHHHHHHHHHHHTTSTT-------------------CCEEEEEETTCCTTCT-TCHHHHHHHHHHH
T ss_pred CCceeeecccceecChHHHHHHHHHHhhccC-------------------CCccEEEeCCCCCCCc-CCHHHHHHHHHHH
Confidence 5889999999999999999999999875321 2467899999999854 5667888888888
Q ss_pred HcC
Q 042005 424 ING 426 (432)
Q Consensus 424 l~~ 426 (432)
|..
T Consensus 206 l~~ 208 (218)
T d2i3da1 206 LDR 208 (218)
T ss_dssp HHH
T ss_pred HHH
Confidence 853
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=86.38 E-value=3.7 Score=33.88 Aligned_cols=108 Identities=18% Similarity=0.192 Sum_probs=55.2
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhh----hcCCeEE---cCCCCeeecCCCCCCCCCcccCChhhH
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMM----ELGPFRV---NKDGKTLYQNEYAWNKDYKVNGDIRTA 173 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~----E~GP~~~---~~~~~~l~~N~~SW~~~~~~~~~~~~a 173 (432)
|.+|+|.-.. +.|.||.+.|+||++.. +-.+. +.| |++ +.-|...+.++ ....+-+..+
T Consensus 8 G~~l~y~~~G------~g~~vv~lHG~~~~~~~-~~~~~~~l~~~g-~~vi~~D~~G~G~S~~~------~~~~~~~~~~ 73 (271)
T d1va4a_ 8 GTQIYFKDWG------SGKPVLFSHGWLLDADM-WEYQMEYLSSRG-YRTIAFDRRGFGRSDQP------WTGNDYDTFA 73 (271)
T ss_dssp SCEEEEEEES------SSSEEEEECCTTCCGGG-GHHHHHHHHTTT-CEEEEECCTTSTTSCCC------SSCCSHHHHH
T ss_pred CeEEEEEEEc------CCCeEEEECCCCCCHHH-HHHHHHHHHhCC-CEEEEEecccccccccc------cccccccccc
Confidence 5778764331 22456779999999886 44333 334 322 22221111111 0112344566
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 174 RDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 174 ~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
+++.+++... ...++.+.|.|.||..+ |..+..+.. -.++++++.++..
T Consensus 74 ~~~~~~~~~~-------~~~~~~~vg~s~gG~~~---~~~~a~~~p------~~v~~~v~~~~~~ 122 (271)
T d1va4a_ 74 DDIAQLIEHL-------DLKEVTLVGFSMGGGDV---ARYIARHGS------ARVAGLVLLGAVT 122 (271)
T ss_dssp HHHHHHHHHH-------TCCSEEEEEETTHHHHH---HHHHHHHCS------TTEEEEEEESCCC
T ss_pred ccceeeeeec-------CCCcceeeccccccccc---ccccccccc------ceeeEEEeecccc
Confidence 6666555432 23578888888888533 333333332 2356666665543
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=86.16 E-value=0.33 Score=43.62 Aligned_cols=42 Identities=10% Similarity=-0.081 Sum_probs=29.5
Q ss_pred CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccc
Q 042005 344 IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHF 407 (432)
Q Consensus 344 irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHm 407 (432)
-+++|.+|..|.++ ...+++.++|.=.| ...++.++.+++|-
T Consensus 249 pp~li~~g~~D~l~--~~~~~~~~~L~~~G--------------------~~v~~~~~~g~~H~ 290 (317)
T d1lzla_ 249 PPTYLSTMELDPLR--DEGIEYALRLLQAG--------------------VSVELHSFPGTFHG 290 (317)
T ss_dssp CCEEEEEETTCTTH--HHHHHHHHHHHHTT--------------------CCEEEEEETTCCTT
T ss_pred CCeEEEECCCCCCH--HHHHHHHHHHHHCC--------------------CCEEEEEECcCccC
Confidence 58999999999654 45667777664111 13577889999993
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=84.70 E-value=0.81 Score=38.54 Aligned_cols=57 Identities=18% Similarity=0.158 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHHH---HCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 172 TARDSYTFLVSWLA---RFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 172 ~a~d~~~fL~~F~~---~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
.......++..+++ ++ ....+++++.|-|.|| .+|..+.-.+ ....+.|++..+|+.
T Consensus 83 ~~~~~~~~v~~li~~~~~~-~i~~~ri~l~GfSqGg----~~a~~~~l~~-----~~~~~~~~v~~~g~~ 142 (218)
T d1auoa_ 83 ELEVSAKMVTDLIEAQKRT-GIDASRIFLAGFSQGG----AVVFHTAFIN-----WQGPLGGVIALSTYA 142 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCGGGEEEEEETHHH----HHHHHHHHTT-----CCSCCCEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHHh-CCCCcceEEeeeCcch----HHHHHHHHhc-----ccccceeeeeccccC
Confidence 33444444444443 33 3456789999999999 5665553222 235688888888753
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=84.61 E-value=6.8 Score=33.57 Aligned_cols=125 Identities=15% Similarity=0.135 Sum_probs=66.9
Q ss_pred eEEec-CCCCceEEEEEEEcCCCCCCCCeEEEEcCCCCh---hhh-hHh---hhhhcCCeE-EcCCCCeeecCCCCCCCC
Q 042005 93 YVNVD-SQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGF---SSF-GAG---TMMELGPFR-VNKDGKTLYQNEYAWNKD 163 (432)
Q Consensus 93 yl~v~-~~~~~~lFywf~es~~~p~~~PlilWlnGGPGc---SSl-~~G---~f~E~GP~~-~~~~~~~l~~N~~SW~~~ 163 (432)
+++|. +..++.+-..+.. ...|+|.+|-|.+|. ++- ..+ -+...-|+. |-+++. ..||..+
T Consensus 6 ~~~v~s~~~~r~~~~~v~~-----~~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~-----~~~~y~~ 75 (267)
T d1r88a_ 6 NLMVPSPSMGRDIPVAFLA-----GGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGG-----AYSMYTN 75 (267)
T ss_dssp EEEEEETTTTEEEEEEEEC-----CSSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCC-----TTSTTSB
T ss_pred EEEEecccCCceeeEEEEC-----CCCCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCC-----CCcCCcc
Confidence 45553 3345666665542 233999999996552 111 001 112233443 333321 1233221
Q ss_pred CcccC----ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 164 YKVNG----DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 164 ~~~~~----~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
..... +.-.++++..+|++ .|+ ......+|+|-|+|| +.|.++.-+... .+++++..+|.++
T Consensus 76 ~~~~~~~~~~tfl~~eL~~~i~~---~~~-~d~~r~~i~G~SmGG----~~Al~la~~~Pd------~F~av~~~SG~~~ 141 (267)
T d1r88a_ 76 WEQDGSKQWDTFLSAELPDWLAA---NRG-LAPGGHAAVGAAQGG----YGAMALAAFHPD------RFGFAGSMSGFLY 141 (267)
T ss_dssp CSSCTTCBHHHHHHTHHHHHHHH---HSC-CCSSCEEEEEETHHH----HHHHHHHHHCTT------TEEEEEEESCCCC
T ss_pred ccccccccHHHHHHHHHHHHHHH---hcC-CCCCceEEEEEcchH----HHHHHHHHhCcc------cccEEEEeCCccC
Confidence 11001 12344555555544 354 334568999999999 777777666532 5788888888877
Q ss_pred cc
Q 042005 240 LE 241 (432)
Q Consensus 240 p~ 241 (432)
+.
T Consensus 142 ~~ 143 (267)
T d1r88a_ 142 PS 143 (267)
T ss_dssp TT
T ss_pred CC
Confidence 64
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=84.24 E-value=2.4 Score=38.03 Aligned_cols=53 Identities=9% Similarity=0.083 Sum_probs=34.8
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccc
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNA 236 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg 236 (432)
..++++.+.+.++.+.. ...+++|.|+|.|| .+|.++...... .+++++..++
T Consensus 60 ~~~~~l~~~i~~~~~~~---~~~~v~lvGhS~GG----~~~~~~~~~~p~------~v~~vv~i~~ 112 (319)
T d1cvla_ 60 GRGEQLLAYVKQVLAAT---GATKVNLIGHSQGG----LTSRYVAAVAPQ------LVASVTTIGT 112 (319)
T ss_dssp SHHHHHHHHHHHHHHHH---CCSCEEEEEETTHH----HHHHHHHHHCGG------GEEEEEEESC
T ss_pred ccHHHHHHHHHHHHHHh---CCCCEEEEeccccH----HHHHHHHHHCcc------ccceEEEECC
Confidence 45677777788777765 24689999999999 455555555422 3455554443
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=83.56 E-value=1.5 Score=40.53 Aligned_cols=133 Identities=23% Similarity=0.284 Sum_probs=72.8
Q ss_pred EecCCCCceEEEEEEEcCCCCCCCCeEEEEcC--CCCh-------------hhhhHhhhhhcCCeEEcCC--CCeeecCC
Q 042005 95 NVDSQDGRSLFYYFVESPQNSSSKPLVLWLNG--GPGF-------------SSFGAGTMMELGPFRVNKD--GKTLYQNE 157 (432)
Q Consensus 95 ~v~~~~~~~lFywf~es~~~p~~~PlilWlnG--GPGc-------------SSl~~G~f~E~GP~~~~~~--~~~l~~N~ 157 (432)
.|....|..|-...|.-. +..+-|+||...+ +++- .... -.|.+.|=-.+..| |..-+.-+
T Consensus 28 ~i~~rDG~~L~~~v~~P~-~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~-~~~a~~Gy~vv~~d~RG~g~S~G~ 105 (381)
T d1mpxa2 28 MIPMRDGVKLHTVIVLPK-GAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGD-DVFVEGGYIRVFQDVRGKYGSEGD 105 (381)
T ss_dssp EEECTTSCEEEEEEEEET-TCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGG-HHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEECCCCCEEEEEEEEeC-CCCCccEEEEEccCCCCCcccccccccccccchhHH-HHHHhCCCEEEEEecCccCCCCCc
Confidence 343334678887766433 3467899999873 2111 1121 33666664443222 21111111
Q ss_pred CCCCC----CCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEe
Q 042005 158 YAWNK----DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAM 233 (432)
Q Consensus 158 ~SW~~----~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~I 233 (432)
+.+.. .+.. ...+.+.|..+. .+|+.+.|...+..+.++|.||||. .+..+.... .-.||.++.
T Consensus 106 ~~~~~~~~~~~~~-~~~~~~~D~~~~-i~w~~~~~~~~~~~vg~~G~SygG~----~~~~~a~~~------~~~l~a~v~ 173 (381)
T d1mpxa2 106 YVMTRPLRGPLNP-SEVDHATDAWDT-IDWLVKNVSESNGKVGMIGSSYEGF----TVVMALTNP------HPALKVAVP 173 (381)
T ss_dssp CCTTCCCSBTTBC-SSCCHHHHHHHH-HHHHHHHCTTEEEEEEEEEETHHHH----HHHHHHTSC------CTTEEEEEE
T ss_pred eeccchhhhhccc-chhHHHHHHHHH-HHHHhhcCCcCccceeeecccHHHH----HHHHHHhcc------ccccceeee
Confidence 22211 1111 122345666664 5677777666667899999999994 443333332 335899999
Q ss_pred cccccccc
Q 042005 234 GNALIDLE 241 (432)
Q Consensus 234 GNg~idp~ 241 (432)
..|.+|..
T Consensus 174 ~~~~~d~~ 181 (381)
T d1mpxa2 174 ESPMIDGW 181 (381)
T ss_dssp ESCCCCTT
T ss_pred eccccccc
Confidence 99988854
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=82.31 E-value=1.6 Score=37.27 Aligned_cols=49 Identities=14% Similarity=0.245 Sum_probs=33.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP 413 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP 413 (432)
..+++|.+|+.|..++. +++..+.|.= .| -+.+|.++.+.||.-+..++
T Consensus 190 ~~~~~i~~G~~D~~~~~--~~~~~~~L~~---------------~g-----~~~~~~~~~~ggH~~~~W~~ 238 (255)
T d1jjfa_ 190 LKLLFIACGTNDSLIGF--GQRVHEYCVA---------------NN-----INHVYWLIQGGGHDFNVWKP 238 (255)
T ss_dssp CSEEEEEEETTCTTHHH--HHHHHHHHHH---------------TT-----CCCEEEEETTCCSSHHHHHH
T ss_pred CCcceEEeCCCCCCchH--HHHHHHHHHH---------------CC-----CCEEEEEECCCCcCHHHHHH
Confidence 46889999999987653 5566666530 01 14677888999998665554
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=82.06 E-value=0.75 Score=40.99 Aligned_cols=60 Identities=13% Similarity=0.092 Sum_probs=40.8
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
.+..++...|++..+++|+ .+++|+|+|-||-.+-.+|..|.+.+ ..+++-+..|.|-+.
T Consensus 118 ~~~~~i~~~i~~~~~~~~~---~~i~iTGHSLGGAlA~L~a~~l~~~~------~~~~~~~tfG~PrvG 177 (271)
T d1tiaa_ 118 LVRDDIIKELKEVVAQNPN---YELVVVGHSLGAAVATLAATDLRGKG------YPSAKLYAYASPRVG 177 (271)
T ss_pred HHHHHHHHHHHHHHHhCCC---ceEEEeccchHHHHHHHHHHHHHHcC------CCcceEEEeCCCCcC
Confidence 4556677888888887775 47999999999976666666654432 234555666666553
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| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.02 E-value=1.6 Score=37.17 Aligned_cols=63 Identities=14% Similarity=-0.001 Sum_probs=49.2
Q ss_pred HHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHH
Q 042005 339 LMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALV 418 (432)
Q Consensus 339 LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~ 418 (432)
+.....++||.+|+.|.++|+..++.+.+.|+=.+ .+.+++.+.+++|---..+.+.+..
T Consensus 198 ~~~~~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g--------------------~~~~~~~~~~~~H~~~~~~~~~~~~ 257 (263)
T d1vkha_ 198 LSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQ--------------------LSFKLYLDDLGLHNDVYKNGKVAKY 257 (263)
T ss_dssp HHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTT--------------------CCEEEEEECCCSGGGGGGCHHHHHH
T ss_pred ccccCCCeeeeecCCCcccCHHHHHHHHHHHHHCC--------------------CCEEEEEECCCCchhhhcChHHHHH
Confidence 33446899999999999999999999998875111 2578899999999877777776666
Q ss_pred HHH
Q 042005 419 LFS 421 (432)
Q Consensus 419 m~~ 421 (432)
+++
T Consensus 258 i~~ 260 (263)
T d1vkha_ 258 IFD 260 (263)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
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| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.82 E-value=1.5 Score=37.32 Aligned_cols=40 Identities=13% Similarity=0.090 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhc
Q 042005 172 TARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNN 218 (432)
Q Consensus 172 ~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n 218 (432)
..+|....++.+.+..+ ..+++|+|+|+|| .+|..+....
T Consensus 86 ~~~d~~~~~~~l~~~~~---~~~i~l~G~S~Gg----~lal~~a~~~ 125 (263)
T d1vkha_ 86 NLYDAVSNITRLVKEKG---LTNINMVGHSVGA----TFIWQILAAL 125 (263)
T ss_dssp HHHHHHHHHHHHHHHHT---CCCEEEEEETHHH----HHHHHHHTGG
T ss_pred HHHhhhhhhhccccccc---ccceeeeccCcHH----HHHHHHHHhc
Confidence 34455555555555443 3579999999999 5665554443
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| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=80.75 E-value=5.6 Score=32.02 Aligned_cols=101 Identities=12% Similarity=0.019 Sum_probs=51.8
Q ss_pred CeEEEEcCCCChhhhhHh----hhhhcCCeEE-cCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCC
Q 042005 119 PLVLWLNGGPGFSSFGAG----TMMELGPFRV-NKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTR 193 (432)
Q Consensus 119 PlilWlnGGPGcSSl~~G----~f~E~GP~~~-~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~ 193 (432)
|.||.+.|.+|.+.. +- .|.+.| |++ -.|-+ -+.-+.. ..+......+....+..++... ....
T Consensus 3 ~~vvllHG~~~~~~~-w~~~~~~L~~~g-~~vi~~Dl~-----G~G~S~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~ 71 (258)
T d1xkla_ 3 KHFVLVHGACHGGWS-WYKLKPLLEAAG-HKVTALDLA-----ASGTDLR--KIEELRTLYDYTLPLMELMESL--SADE 71 (258)
T ss_dssp CEEEEECCTTCCGGG-GTTHHHHHHHTT-CEEEECCCT-----TSTTCCC--CGGGCCSHHHHHHHHHHHHHTS--CSSS
T ss_pred CcEEEECCCCCCHHH-HHHHHHHHHhCC-CEEEEecCC-----CCCCCCC--CCCCCcchHHHHHHHhhhhhcc--cccc
Confidence 456669999988765 33 444456 332 22211 0111000 0011112233333344444443 2346
Q ss_pred CeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 194 DFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 194 ~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
++++.|+|+||. +|..+..+. .-.++++++.++.+-.
T Consensus 72 ~~~lvghS~Gg~----va~~~a~~~------p~~~~~lil~~~~~~~ 108 (258)
T d1xkla_ 72 KVILVGHSLGGM----NLGLAMEKY------PQKIYAAVFLAAFMPD 108 (258)
T ss_dssp CEEEEEETTHHH----HHHHHHHHC------GGGEEEEEEESCCCCC
T ss_pred cccccccchhHH----HHHHHhhhh------ccccceEEEecccCCC
Confidence 899999999994 455554443 2357788777776543
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