Citrus Sinensis ID: 042008

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
MEARSFTIPSCSRLFFALTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLSN
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccccHHcHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mearsftipscsRLFFALTVLLLISninptlagtsttaksnSLKIYKNFIKtscnstlypALCYKYLSShastiktdsVKLCNTALTVNLKAANKTSALVTSMakkgglrpaeKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAmtdedtcmdefeennvRESVKNKIKKSIVDLRKITSNSLALINRLSN
Flexible Loop (DISEMBL)
mearsftipscsRLFFALTVLLLISNINptlagtsttaksnsLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNlkaanktsalvtsmakkgglrpaEKAVIEDCNEEIDDCVDELRKASNVLDNLRdalnkedqmaDIKTWVSAAMTDEDTCMDEfeennvresvknkikksivdlrkitsnslalinrlsn
Low Complexity Region (SEG)
MEARSFTIPSCSRLFFALTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLSN
Disordered region (IsUnstruct)
*****FTIPSCSRLFFALTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSM*********EKAVIEDCNEEIDDCVDELRKASNVLDNLRDAL*****MADIKTWVSAAMT************************SIVDLRKIT************
Disordered Region (DISOPRED)
***********SRLFFALTVLLLISNINP*********************KTSCNSTLYPALCYK***************LCNTALTVNLKAANKTSALV**************AVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENN**********KSIVDLRKITSNSLALINRL**
Disordered Region (DISEMBL)
********PSCSRLFFALTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALV*************KAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLSN
Disordered Region (DISPRO)
MEARSFTIPSCSRLFFALTVLLLISNINPTLA************IYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLSN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEARSFTIPSCSRLFFALTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLSN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	208	2.2.26 [Sep-21-2011]
P17407	193	21 kDa protein OS=Daucus	N/A	no	0.769	0.829	0.370	3e-27
O04886	584	Pectinesterase 1 OS=Citru	no	no	0.807	0.287	0.294	4e-16
P83948	584	Pectinesterase 3 OS=Citru	no	no	0.807	0.287	0.294	4e-16
Q42534	587	Pectinesterase 2 OS=Arabi	no	no	0.759	0.269	0.301	2e-15
Q43143	583	Pectinesterase/pectineste	N/A	no	0.903	0.322	0.271	5e-15
O49006	592	Pectinesterase/pectineste	no	no	0.764	0.268	0.275	4e-14
Q9FK05	587	Probable pectinesterase/p	no	no	0.697	0.247	0.295	3e-12
Q9LUL8	968	Putative pectinesterase/p	no	no	0.75	0.161	0.296	6e-11
Q7Y201	614	Probable pectinesterase/p	no	no	0.798	0.270	0.316	1e-09
Q3E8Z8	732	Putative pectinesterase/p	no	no	0.884	0.251	0.253	1e-09

>sp|P17407|21KD_DAUCA 21 kDa protein OS=Daucus carota PE=2 SV=1

 Score =  121 bits (304), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 100/162 (61%), Gaps = 2/162 (1%)

Query: 48  NFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKG 107
            FIKTSC  T YPA+C + LS++A TI+ +  +L +TAL V+L    +    +  + K  
Sbjct: 27  QFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFK 86

Query: 108 GLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKE--DQMADIKTWVSAAMTDE 165
           GL+  + A I DC EE++D +D + ++ + + NL  A   +   +M++++TWVSAA+TDE
Sbjct: 87  GLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDE 146

Query: 166 DTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLS 207
            TCMD F    +   +K  ++  +V + ++TSN+LAL+N  +
Sbjct: 147 TTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFA 188

Daucus carota (taxid: 4039)

>sp|O04886|PME1_CITSI Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 2/170 (1%)

Query: 41  NSLKIYKNFIKTSCNSTLYPALCYKYLSS--HASTIKTDSVKLCNTALTVNLKAANKTSA 98
           N  + +   +K+SC+ST YP LC+  +++   AS   T    +   +L +   A      
Sbjct: 60  NGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYF 119

Query: 99  LVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWV 158
            +  + K+  L   EK  + DC E ID+ +DEL KA   L+   +  +      D+KT +
Sbjct: 120 GIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLM 179

Query: 159 SAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLSN 208
           SAAMT++ TC+D F  ++  + V++ +    V + K+ SN+LA+I  +++
Sbjct: 180 SAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTD 229

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Citrus sinensis (taxid: 2711)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|P83948|PME3_CITSI Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1

 Score = 84.7 bits (208), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 2/170 (1%)

Query: 41  NSLKIYKNFIKTSCNSTLYPALCYKYLSS--HASTIKTDSVKLCNTALTVNLKAANKTSA 98
           N  + +   +K+SC+ST YP LC+  +++   AS   T    +   +L +   A      
Sbjct: 60  NGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYF 119

Query: 99  LVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWV 158
            +  + K+  L   EK  + DC E ID+ +DEL KA   L+   +  +      D+KT +
Sbjct: 120 GIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLM 179

Query: 159 SAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLSN 208
           SAAMT++ TC+D F  ++  + V++ +    V + K+ SN+LA+I  +++
Sbjct: 180 SAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTD 229

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Citrus sinensis (taxid: 2711)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|Q42534|PME2_ARATH Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2

 Score = 82.0 bits (201), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 1/159 (0%)

Query: 50  IKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSM-AKKGG 108
           +K+ C+STLYP LC+  +++      T   ++   +L +  KA       V  + AK+ G
Sbjct: 62  LKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKG 121

Query: 109 LRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTC 168
           L P E   + DC E ID+ +DEL  A   L       +      D+KT +S+A+T++ TC
Sbjct: 122 LTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTC 181

Query: 169 MDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLS 207
           +D F  ++    V+  + K  V +  + SN+LA+I  ++
Sbjct: 182 LDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMT 220

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|Q43143|PMEU1_SOLLC Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1

 Score = 80.9 bits (198), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 113/206 (54%), Gaps = 18/206 (8%)

Query: 13  RLFFALTV-LLLISNINPTLAGTSTTAK-----SNSLKIYKN---FIKTSCNSTLYPALC 63
           +++ A+   +LL++ +   +AG  + +K     ++ + I  +    +K++C++TL+P LC
Sbjct: 20  KIYLAIVASVLLVAAVIGVVAGVKSHSKNSDDHADIMAISSSAHAIVKSACSNTLHPELC 79

Query: 64  YKYLS-----SHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAK-KGGLRPAEKAVI 117
           Y  +      S   T + D ++L   +L + +KA  +    V  + K + GL P EK  +
Sbjct: 80  YSAIVNVSDFSKKVTSQKDVIEL---SLNITVKAVRRNYYAVKELIKTRKGLTPREKVAL 136

Query: 118 EDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNV 177
            DC E +D+ +DEL  A   L+   +  + ++ + D+KT +S+A+T+++TC+D F  +  
Sbjct: 137 HDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEA 196

Query: 178 RESVKNKIKKSIVDLRKITSNSLALI 203
            + V+  + K    + K+ SN+LA+I
Sbjct: 197 DKKVRKVLLKGQKHVEKMCSNALAMI 222

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Solanum lycopersicum (taxid: 4081)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|O49006|PME3_ARATH Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2

 Score = 77.8 bits (190), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 1/160 (0%)

Query: 50  IKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKK-GG 108
           +++SC+ST YP LC   + +      T    +   ++ + + A       V  + KK  G
Sbjct: 59  LRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKG 118

Query: 109 LRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTC 168
           L P EK  + DC E ID+ +DEL +    L          +   D+KT +S+A+T+++TC
Sbjct: 119 LTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETC 178

Query: 169 MDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLSN 208
           +D F  ++  + V+  + K  + +  + SN+LA+I  +++
Sbjct: 179 LDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKNMTD 218

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|Q9FK05|PME61_ARATH Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1

 Score = 72.0 bits (175), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 85/159 (53%), Gaps = 14/159 (8%)

Query: 50  IKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANK---TSALVTSMAKK 106
           I  +C+ +LYP LC   L     ++  D  +L + +    L+  +K   TS+ +T     
Sbjct: 75  ISRTCSKSLYPNLCIDTLLDFPGSLTADENELIHISFNATLQKFSKALYTSSTITYTQ-- 132

Query: 107 GGLRPAEKAVIEDCNEEIDDCVDELRKA-SNVLDNLRDALNKEDQMADIKTWVSAAMTDE 165
             + P  ++  + C E +DD VD L +A S+V+      ++ ++  +D+ TW+S+AMT+ 
Sbjct: 133 --MPPRVRSAYDSCLELLDDSVDALTRALSSVV-----VVSGDESHSDVMTWLSSAMTNH 185

Query: 166 DTCMDEFEE-NNVRESVKNKIKKSIVDLRKITSNSLALI 203
           DTC D F+E       VK+++  ++ DL ++ SN LA+ 
Sbjct: 186 DTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAIF 224

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|Q9LUL8|PME26_ARATH Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 9/165 (5%)

Query: 50  IKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGL 109
           ++  C+ T YPA C   +S   S+  TD   L   +L V +   N  + L   +A++   
Sbjct: 271 LRNVCSVTRYPASCVSSISKLPSSNTTDPEALFRLSLQVVINELNSIAGLPKKLAEETDD 330

Query: 110 RPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDA--LNKEDQMADIKTWVSAAMTDEDT 167
               K+ +  C +  +D +D +    + ++ + D   + K   + +I+TW+SAA+TD DT
Sbjct: 331 E-RLKSSLSVCGDVFNDAIDIVNDTISTMEEVGDGKKILKSSTIDEIQTWLSAAVTDHDT 389

Query: 168 CMDEFEE--NNVRE----SVKNKIKKSIVDLRKITSNSLALINRL 206
           C+D  +E   N  E     +  K+K ++V+ RK TSNSLA+I + 
Sbjct: 390 CLDALDELSQNKTEYANSPISLKLKSAMVNSRKFTSNSLAIIAKF 434

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|Q7Y201|PME13_ARATH Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=2

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 14/180 (7%)

Query: 29  PTLAGTSTTAKSNSLKIYKN--FIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTAL 86
           PT +  +  + + S+K  +    I+T C+STLY  +C K L +   T K  ++    T L
Sbjct: 86  PTPSQKAPVSAAQSVKPGQGDKIIQTLCSSTLYMQICEKTLKNR--TDKGFALDNPTTFL 143

Query: 87  TVNLKAANKTSALVTSMAKKGGLRPA---EKAVIEDCNEEIDDCVDELRKASNVLDNLRD 143
              ++A N+   LV  + K   L+     +K  IE C   ++D  +E   + N + N+ +
Sbjct: 144 KSAIEAVNEDLDLV--LEKVLSLKTENQDDKDAIEQCKLLVEDAKEETVASLNKI-NVTE 200

Query: 144 ALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALI 203
             + E  + D+++W+SA M+ ++TC+D FEE N++  VK  +  S V    +TSNSLALI
Sbjct: 201 VNSFEKVVPDLESWLSAVMSYQETCLDGFEEGNLKSEVKTSVNSSQV----LTSNSLALI 256

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

>sp|Q3E8Z8|PME28_ARATH Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1

 Score = 62.8 bits (151), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 21/205 (10%)

Query: 14  LFFALTVLLLISNINPTLAGTSTTAKSNS----LKIYKNFIKTSCNSTLYPALCYKYLSS 69
           +  +++ +LLIS +     G S     N+    +      IK  C  T Y   C   L  
Sbjct: 17  VIISISSVLLISMVVAVTIGVSVNKSDNAGDEEITTSVKAIKDVCAPTDYKETCEDTLRK 76

Query: 70  HASTIKTDSVKLCNTALTVNLKAAN---KTSALVTSMAKKGGLRPAEKAVIEDCNEEIDD 126
            A    +D ++L  TA    +K  +   K S  +  + K     P  K  ++ C E +D 
Sbjct: 77  DAKD-TSDPLELVKTAFNATMKQISDVAKKSQTMIELQKD----PRAKMALDQCKELMDY 131

Query: 127 CVDELRKASNVLDNLRDALNKEDQ-MADIKTWVSAAMTDEDTCMDEFE--ENNVRESVKN 183
            + EL K+   L       +K D+ +  ++ W+SA ++ E TC+D F+  + N  E++K 
Sbjct: 132 AIGELSKSFEELGKFE--FHKVDEALVKLRIWLSATISHEQTCLDGFQGTQGNAGETIKK 189

Query: 184 KIKKSIVDLRKITSNSLALINRLSN 208
            +K ++    ++T N LA++  +SN
Sbjct: 190 ALKTAV----QLTHNGLAMVTEMSN 210

Acts in the modification of cell walls via demethylesterification of cell wall pectin.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
224122614	202	predicted protein [Populus trichocarpa]	0.841	0.866	0.508	3e-44
147860755	211	hypothetical protein VITISV_005236 [Viti	0.798	0.786	0.512	9e-40
225466055	211	PREDICTED: 21 kDa protein-like [Vitis vi	0.798	0.786	0.512	9e-40
255539737	206	21 kDa protein precursor, putative [Rici	0.975	0.985	0.507	1e-39
224134488	208	predicted protein [Populus trichocarpa]	0.980	0.980	0.471	2e-39
224136758	199	predicted protein [Populus trichocarpa]	0.817	0.854	0.470	7e-37
388521955	197	unknown [Medicago truncatula]	0.759	0.802	0.484	3e-36
388519419	205	unknown [Lotus japonicus]	0.764	0.775	0.490	4e-36
356545276	202	PREDICTED: 21 kDa protein-like [Glycine	0.903	0.930	0.430	5e-36
351723267	207	uncharacterized protein LOC100305537 pre	0.923	0.927	0.441	6e-36

>gi|224122614|ref|XP_002318880.1| predicted protein [Populus trichocarpa] gi|222859553|gb|EEE97100.1| predicted protein [Populus trichocarpa]

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 93/183 (50%), Positives = 136/183 (74%), Gaps = 8/183 (4%)

Query: 25  SNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNT 84
           +N+  +LA T++       K Y N+++T+CNST YP LC+K LSS+ STIKT+ +KLC T
Sbjct: 27  TNVQLSLADTTS-------KTYTNYLQTACNSTTYPQLCFKSLSSYTSTIKTNYLKLCRT 79

Query: 85  ALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDA 144
           ALTV LKAA+ TS+LV +++K+ GL   E  +++DC EEI D +DEL ++   L +L+ +
Sbjct: 80  ALTVTLKAASNTSSLVKALSKQKGLSKTEAGIVKDCIEEIGDSIDELNQSLKALGSLKGS 139

Query: 145 LNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALIN 204
            + E Q+A+IKTW+SAA+TDEDTC + FEE N+ + V  KI+KSIV++ ++TSN+LALIN
Sbjct: 140 -DIEFQIANIKTWISAAITDEDTCTEGFEERNITDEVMIKIRKSIVNVARLTSNALALIN 198

Query: 205 RLS 207
           +LS
Sbjct: 199 KLS 201

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147860755|emb|CAN79278.1| hypothetical protein VITISV_005236 [Vitis vinifera]

 Score =  169 bits (427), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 85/166 (51%), Positives = 114/166 (68%)

Query: 42  SLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVT 101
           SL I K FIKTSCNST YP +CYK LSS+AS ++T  +KL N ALTV+LKAA   S+ +T
Sbjct: 40  SLTISKQFIKTSCNSTTYPGVCYKSLSSYASKVQTSPLKLANVALTVSLKAARNASSTIT 99

Query: 102 SMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAA 161
            + ++ G+   E ++++DC E   DC+DEL+++     +L    N   QMA+IKTWVSAA
Sbjct: 100 LLLERKGMTRMETSIVKDCVENFGDCIDELQQSLQEFKSLGGGKNVAFQMANIKTWVSAA 159

Query: 162 MTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLS 207
           +TDE TC D FE   V  S++ +IK  I ++ KITSN+LALIN LS
Sbjct: 160 LTDEYTCSDGFEGQKVSSSLQQQIKNYISNVAKITSNALALINNLS 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225466055|ref|XP_002263511.1| PREDICTED: 21 kDa protein-like [Vitis vinifera]

 Score =  169 bits (427), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 85/166 (51%), Positives = 114/166 (68%)

Query: 42  SLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVT 101
           SL I K FIKTSCNST YP +CYK LSS+AS ++T  +KL N ALTV+LKAA   S+ +T
Sbjct: 40  SLTISKQFIKTSCNSTTYPGVCYKSLSSYASKVQTSPLKLANVALTVSLKAARNASSTIT 99

Query: 102 SMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAA 161
            + ++ G+   E ++++DC E   DC+DEL+++     +L    N   QMA+IKTWVSAA
Sbjct: 100 LLLERKGMTRMETSIVKDCVENFGDCIDELQQSLQEFKSLGGGKNVAFQMANIKTWVSAA 159

Query: 162 MTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLS 207
           +TDE TC D FE   V  S++ +IK  I ++ KITSN+LALIN LS
Sbjct: 160 LTDEYTCSDGFEGQKVSSSLQQQIKNYISNVAKITSNALALINNLS 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539737|ref|XP_002510933.1| 21 kDa protein precursor, putative [Ricinus communis] gi|223550048|gb|EEF51535.1| 21 kDa protein precursor, putative [Ricinus communis]

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/209 (50%), Positives = 147/209 (70%), Gaps = 6/209 (2%)

Query: 1   MEARSFTIPSCSRL--FFALTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTL 58
           ME ++ T P C ++   F +T L+ ISN   +LA    T    S   YKN++KT+CNST 
Sbjct: 1   METKTITSP-CLQVSTLFLITFLVFISNTQNSLA---ITTTKTSKTTYKNYLKTACNSTT 56

Query: 59  YPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIE 118
           YP +CY  LS + STI+T+ +KLCN ALT+ LKAA+ TSA+V S++K+ GL   E AVI+
Sbjct: 57  YPKICYNTLSPYTSTIQTNDLKLCNAALTITLKAASNTSAMVKSLSKQKGLSKGEVAVIK 116

Query: 119 DCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVR 178
           DC  EI+D VDEL+++   L NL+ + + E Q+ +IKTW+SAA+TDE+TC D FE   V 
Sbjct: 117 DCQYEIEDSVDELKQSLKALKNLKGSADMEFQIDNIKTWISAAITDENTCTDGFEGMKVS 176

Query: 179 ESVKNKIKKSIVDLRKITSNSLALINRLS 207
             VK+KIKKSIV++ ++TSN+LALIN+LS
Sbjct: 177 SKVKSKIKKSIVNVNRLTSNALALINKLS 205

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134488|ref|XP_002321836.1| predicted protein [Populus trichocarpa] gi|222868832|gb|EEF05963.1| predicted protein [Populus trichocarpa]

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/210 (47%), Positives = 139/210 (66%), Gaps = 6/210 (2%)

Query: 1   MEARSFTIPSCSR---LFFALTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNST 57
           MEA+   IPS +    L    T LL IS+ N   +  + T  +     Y N++KT+CNST
Sbjct: 1   MEAK--IIPSSTSFNVLSLLFTFLLCISSSNVQTSSAAITTTTTPSITYTNYLKTACNST 58

Query: 58  LYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVI 117
            YP LC K LSS+ STIKT+ +KLC+TALTV LKA++ TS LV S++K  GL   E A+I
Sbjct: 59  TYPQLCLKSLSSYTSTIKTNELKLCSTALTVALKASSNTSKLVKSLSKIRGLSKTEAAII 118

Query: 118 EDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNV 177
            DC EEI + +DE++++  VL +L  + ++E Q+ ++KTWVS A+TD+ TC D F+ NNV
Sbjct: 119 RDCIEEIGNSIDEIKQSVKVLRSLTGS-DRELQIDNLKTWVSGAITDQTTCTDGFDGNNV 177

Query: 178 RESVKNKIKKSIVDLRKITSNSLALINRLS 207
             +VK  I KSIV++ ++TSN+L  IN LS
Sbjct: 178 NYAVKRAITKSIVNVARLTSNALTFINNLS 207

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136758|ref|XP_002322408.1| predicted protein [Populus trichocarpa] gi|222869404|gb|EEF06535.1| predicted protein [Populus trichocarpa]

 Score =  159 bits (402), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 80/170 (47%), Positives = 118/170 (69%)

Query: 37  TAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKT 96
           T   NS + Y N++K +CNSTLYP LC++ LSS+ STIKT+ +KL   ALTV LKAA+ T
Sbjct: 28  TTTKNSSETYTNYLKKACNSTLYPQLCFESLSSYTSTIKTNDLKLSTKALTVTLKAASNT 87

Query: 97  SALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKT 156
           S LVTS++K G L   E  +I+DC +E+ D +D L+++   L +L  + + + Q+++IKT
Sbjct: 88  SKLVTSLSKGGNLSMTEAGIIKDCIDEMGDSIDMLKQSLKALGSLNGSDHIQFQISNIKT 147

Query: 157 WVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRL 206
           W+SAA+TDE TC D   E  + +    KI+K+IV +  +TSN+LAL+N+L
Sbjct: 148 WMSAALTDETTCTDGISERKISDEAMRKIRKTIVHIAMLTSNALALLNKL 197

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521955|gb|AFK49039.1| unknown [Medicago truncatula]

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/159 (48%), Positives = 111/159 (69%), Gaps = 1/159 (0%)

Query: 49  FIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGG 108
           FIK SC+ST YP LCY  L  HA +I+T+ V L  TAL V L +A  TSA++++++K  G
Sbjct: 36  FIKNSCSSTTYPRLCYTSLVKHADSIQTNHVLLTCTALNVTLASAKSTSAMISTLSKSQG 95

Query: 109 LRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTC 168
           L+P E A ++DC EE+ D VDELR++   +  LR + N E  M+D++TWVSAA+TDE TC
Sbjct: 96  LKPREAAAMKDCVEELSDSVDELRRSIGEMSRLRTS-NFELTMSDVQTWVSAALTDESTC 154

Query: 169 MDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLS 207
            D F+E N   +V+  ++  IV + ++TSN+LALIN+L+
Sbjct: 155 TDGFQEVNAPGNVQTTVRGKIVQVAQLTSNALALINKLA 193

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519419|gb|AFK47771.1| unknown [Lotus japonicus]

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 80/163 (49%), Positives = 114/163 (69%), Gaps = 4/163 (2%)

Query: 49  FIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGG 108
           FIKTSC+ST YP LC+  L  HA +I+ D ++L  TAL V L AA  TSA++++MAKK G
Sbjct: 41  FIKTSCSSTTYPRLCFASLVKHAESIQNDRLQLTCTALNVTLAAAKSTSAMISTMAKKQG 100

Query: 109 LRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTC 168
           ++P E A ++DC E + D VDELR++   L NL+ + N E  M+D++TWVSAA+TDE TC
Sbjct: 101 MKPREVAAMQDCVEVLSDSVDELRRSIAELGNLKTS-NFEMTMSDVQTWVSAALTDESTC 159

Query: 169 MDEFE---ENNVRESVKNKIKKSIVDLRKITSNSLALINRLSN 208
            D F+   E+ V E  K+ ++  +V   ++TSN+LALINRL++
Sbjct: 160 TDGFQQQSEDAVNEDDKSAVRVRVVQTAQLTSNALALINRLAS 202

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545276|ref|XP_003541070.1| PREDICTED: 21 kDa protein-like [Glycine max]

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/195 (43%), Positives = 126/195 (64%), Gaps = 7/195 (3%)

Query: 18  LTVLLLISNINPTLAGTSTTAKSNSLKIYKN----FIKTSCNSTLYPALCYKYLSSHAST 73
           +T L++I  I  +L      AK    + YK     FI+TSC+ST YP LCY  L  HA  
Sbjct: 10  MTSLVII--IASSLTAHCGCAKRGGERPYKEANTLFIRTSCSSTTYPRLCYSSLVKHADL 67

Query: 74  IKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRK 133
           I+T+ V L   AL V L +   TSA+++++AKK GL+P E A ++DC E++ D VDELR+
Sbjct: 68  IQTNRVVLTGAALNVTLASVKSTSAMMSTLAKKQGLKPREVAAMQDCVEQLSDTVDELRR 127

Query: 134 ASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLR 193
           +   + +LR A N E  M+D++TWVSAA+TDE TC D F+E      +K+ +++ ++ + 
Sbjct: 128 SIAEMSDLR-ASNFEMIMSDVQTWVSAALTDETTCNDGFQEITAATDIKSTVRRLVIQVA 186

Query: 194 KITSNSLALINRLSN 208
           ++TSN+LALIN+L+N
Sbjct: 187 QLTSNALALINKLAN 201

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723267|ref|NP_001236761.1| uncharacterized protein LOC100305537 precursor [Glycine max] gi|255625847|gb|ACU13268.1| unknown [Glycine max]

 Score =  156 bits (394), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 91/206 (44%), Positives = 133/206 (64%), Gaps = 14/206 (6%)

Query: 11  CSRLFFALTVLLLISNINPTLAGTSTTAK--SNSLKIYKN----FIKTSCNSTLYPALCY 64
           CS+      V++L S++  TL   S  AK  S+S + Y+     FI+TSC+ST YP LCY
Sbjct: 5   CSKHLMTSLVIILASSL--TL---SQGAKKGSDSERPYQEASTVFIRTSCSSTTYPRLCY 59

Query: 65  KYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEI 124
             L  HA  I+T+ V L  TAL V L +A  TSA+++++AK+ GL+P E A ++DC EE+
Sbjct: 60  SSLVKHADLIQTNRVVLTGTALNVTLASAKSTSAMMSTLAKRQGLKPREVAAMKDCVEEL 119

Query: 125 DDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRES--VK 182
            D VDELR++ + +  L  + N E  M+D++TWVSAA+TDE TC D F+E        VK
Sbjct: 120 ADSVDELRRSISEMAQLTPS-NFEMTMSDVETWVSAALTDESTCTDGFQETAAAGGSNVK 178

Query: 183 NKIKKSIVDLRKITSNSLALINRLSN 208
           N ++  I+ + ++TSN+LALIN+L+N
Sbjct: 179 NTVRGQILQVAQLTSNALALINQLAN 204

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
TAIR|locus:2153147	204	AT5G51520 [Arabidopsis thalian	0.923	0.941	0.397	7.2e-36
TAIR|locus:2122699	199	AT4G25250 [Arabidopsis thalian	0.879	0.919	0.4	1.5e-35
TAIR|locus:2026227	312	AT1G62760 [Arabidopsis thalian	0.836	0.557	0.404	3.3e-31
TAIR|locus:2167893	203	AT5G62360 [Arabidopsis thalian	0.894	0.916	0.374	5.6e-29
TAIR|locus:2168003	202	AT5G62350 [Arabidopsis thalian	0.894	0.920	0.367	2.2e-27
TAIR|locus:2049597	222	AT2G01610 [Arabidopsis thalian	0.913	0.855	0.336	2.5e-26
TAIR|locus:2122624	201	AT4G25260 [Arabidopsis thalian	0.75	0.776	0.389	1.6e-24
TAIR|locus:2033590	200	AT1G70720 [Arabidopsis thalian	0.754	0.785	0.369	3.3e-24
TAIR|locus:2825395	205	AT1G23205 [Arabidopsis thalian	0.754	0.765	0.375	6.8e-24
TAIR|locus:2099545	202	AT3G47380 [Arabidopsis thalian	0.913	0.940	0.333	6.8e-24

TAIR|locus:2153147 AT5G51520 [Arabidopsis thaliana (taxid:3702)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 81/204 (39%), Positives = 130/204 (63%)

Query:    12 SRLFFALTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHA 71
             S++ ++LT++ +    +  +  TS +A S S   +K F+KT+CNST YP  CYK LSS++
Sbjct:     2 SQVLYSLTIVFVFF-ASTNIQKTSGSASSYSQN-HKTFVKTACNSTTYPDKCYKSLSSYS 59

Query:    72 STIKTDSVKLCNTALTVNLKAANKTSALVTSMAK---------KGGLRPAEKAVIEDCNE 122
             S IK+D +KLC TAL +N+K+A + +++V+ + K         KG + P E  +++DC E
Sbjct:    60 SNIKSDPIKLCTTALNLNVKSAKEATSVVSKLLKMSQKSTAGRKGKMLP-EALILKDCLE 118

Query:   123 EIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVK 182
             E+ D + EL++A   + NL+D  +  + + +++TWVS+A+TDE TC D FEE  V +  K
Sbjct:   119 EMKDTIIELKQAITEMKNLQDGGSMAEHITNVRTWVSSALTDEGTCTDGFEEVKVNKETK 178

Query:   183 NKIKKSIVDLRKITSNSLALINRL 206
              K+ K + +L   TSN+LALI  L
Sbjct:   179 KKVNKVVEELATTTSNTLALITNL 202

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0030599 "pectinesterase activity" evidence=IEA

GO:0046910 "pectinesterase inhibitor activity" evidence=ISS

TAIR|locus:2122699 AT4G25250 [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 76/190 (40%), Positives = 124/190 (65%)

Query:    17 ALTVLLLISNIN-PTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIK 75
             +LT+++ I++ N P  A T      N    +  ++KT+CNST YP +CY  LSS++STIK
Sbjct:     8 SLTLMVFINSSNFPKTAATPPGTYQN----HTTYVKTACNSTTYPTMCYNCLSSYSSTIK 63

Query:    76 TDSVKLCNTALTVNLKAANKTSALVTSMAKKG-GLRPAEKAVIEDCNEEIDDCVDELRKA 134
             +D +KLC T+L +N+K+A   + +V+++ +K    +  E ++++DC +E+ D +DEL++A
Sbjct:    64 SDPIKLCTTSLNLNVKSAKNATLVVSNLLQKAKAAKSHEVSILKDCVDEMKDTIDELKQA 123

Query:   135 SNVLDNLRDA-LNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLR 193
                +  +R      E+ + ++KTWVS+A+TDE TC D FEE  V    K K+KK+I +L 
Sbjct:   124 VAEMKYVRGGGKTTEEHLKNVKTWVSSALTDEGTCTDGFEEGRVNVETKKKVKKAISELS 183

Query:   194 KITSNSLALI 203
             K TSN+LAL+
Sbjct:   184 KTTSNTLALL 193

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0030599 "pectinesterase activity" evidence=IEA

GO:0046910 "pectinesterase inhibitor activity" evidence=ISS

TAIR|locus:2026227 AT1G62760 [Arabidopsis thaliana (taxid:3702)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 74/183 (40%), Positives = 119/183 (65%)

Query:    24 ISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCN 83
             +S+++P+   +S++  SN   +  ++IKTSCN TLY  +CY  LS +ASTI+++  KL  
Sbjct:   127 LSSLSPS---SSSSTYSNQTNL--DYIKTSCNITLYKTICYNSLSPYASTIRSNPQKLAV 181

Query:    84 TALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLD--NL 141
              AL + L +A   S  V +++  GGL   E   + DC EEI D V  L+ +   LD  N 
Sbjct:   182 IALNLTLSSAKSASKFVKNISHGGGLTRLEVVAVADCVEEIGDSVTSLQDSIRELDSINY 241

Query:   142 RDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLA 201
             +D+   E  M+D++TWVSAA+T++DTCMD F  + V+ +VK+ +++ +V++ ++TSN+LA
Sbjct:   242 KDSAKFEMVMSDVETWVSAALTNDDTCMDGF--SLVKTAVKDLVRRHVVEVARLTSNALA 299

Query:   202 LIN 204
             LIN
Sbjct:   300 LIN 302

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0030599 "pectinesterase activity" evidence=IEA

GO:0046910 "pectinesterase inhibitor activity" evidence=ISS

TAIR|locus:2167893 AT5G62360 [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 73/195 (37%), Positives = 117/195 (60%)

Query:    16 FALTVLLLISNIN--PTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHAST 73
             F  T L++I+ +    T   T+TT  +N+      F+K+SC  T YP LC+  LS+HAS 
Sbjct:    13 FLTTFLIIIAMLKLVHTTTTTTTTTTTNT-----EFVKSSCTFTTYPRLCFSSLSTHASL 67

Query:    74 IKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRK 133
             I+T    + + AL + L +A  TSA++  ++    L+P E + + DC EE+ D ++ELRK
Sbjct:    68 IQTSPKLMAHAALNITLASAKVTSAMMVRLSNSR-LKPKEVSAMRDCVEELGDTLEELRK 126

Query:   134 ASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLR 193
             +   +  L  + N E  ++DI+TWVSAA+TD +TC D FE  ++   VK  ++  I+ + 
Sbjct:   127 SIGEMCQLSGS-NYEVYISDIQTWVSAALTDVNTCTDGFEGEDMDGKVKVLVRGRILVIA 185

Query:   194 KITSNSLALINRLSN 208
              +TSN+LALIN  ++
Sbjct:   186 HLTSNALALINHFAS 200

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0030599 "pectinesterase activity" evidence=IEA

GO:0046910 "pectinesterase inhibitor activity" evidence=ISS

TAIR|locus:2168003 AT5G62350 [Arabidopsis thaliana (taxid:3702)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 72/196 (36%), Positives = 111/196 (56%)

Query:    14 LFFALTVLLLIS-NINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHAS 72
             LF  L++  L+S  +    A + T A   ++    NFI++SC +T YPALC   LS +A+
Sbjct:     6 LFVLLSISYLLSLELTAATAASQTGASKKAI----NFIQSSCKTTTYPALCVHSLSVYAN 61

Query:    73 TIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELR 132
              I+T   +L  TA+ V L  A  T   V+ + +  GL+  E   I+DC EE++D VD L 
Sbjct:    62 DIQTSPKRLAETAIAVTLSRAQSTKLFVSRLTRMKGLKKREVEAIKDCVEEMNDTVDRLT 121

Query:   133 KASNVLDNLRDALNKEDQ----MADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKS 188
             K+   L  L  +   +DQ    M++ +TW SAA+TDE+TC D F    +   +KN ++  
Sbjct:   122 KSVQEL-KLCGSAKDQDQFAYHMSNAQTWTSAALTDENTCSDGFSGRVMDGRIKNSVRAR 180

Query:   189 IVDLRKITSNSLALIN 204
             I+++   TSN+L+LIN
Sbjct:   181 IMNVGHETSNALSLIN 196

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0030599 "pectinesterase activity" evidence=IEA

GO:0046910 "pectinesterase inhibitor activity" evidence=ISS

GO:0006096 "glycolysis" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

TAIR|locus:2049597 AT2G01610 [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 71/211 (33%), Positives = 117/211 (55%)

Query:    14 LFFALTVLLLISNINPT-LAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHAS 72
             LFF  T LL+  +I+   L     T  +N L    +FI+TSCN+TLYP +C+  LS +AS
Sbjct:    13 LFFT-TFLLIFGSISAVRLLPRPNTTTTNDL----DFIRTSCNATLYPDVCFTSLSGYAS 67

Query:    73 TIKTDSVKLCNTALTVNLKAANKTSALVTSMAKK-----GGLRPAEKAVIEDCNEEIDDC 127
              ++    +L   A+ V+L  A  T+A ++ +++      G       AVI DC   ++D 
Sbjct:    68 AVQDSPARLAKLAIGVSLSQAKSTAAFLSKLSRSAAKYSGDGHQTASAVIRDCVSNVEDA 127

Query:   128 VDELRKASNVLDNL----------RDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNV 177
             VDE+R +   L ++          R       QM++++TW+SAA+TDEDTC D FE+ + 
Sbjct:   128 VDEMRGSLRQLRDMNGRGGGTAARRSVETFRFQMSNVQTWMSAALTDEDTCTDGFEDMDE 187

Query:   178 RESVKNKIKKSIVDLRKITSNSLALINRLSN 208
                +K  +   + +++++TSN+LAL+N  +N
Sbjct:   188 GGLIKTTVCDRLEEVKRLTSNALALVNTYAN 218

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0030599 "pectinesterase activity" evidence=IEA

GO:0046910 "pectinesterase inhibitor activity" evidence=ISS

TAIR|locus:2122624 AT4G25260 [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 62/159 (38%), Positives = 90/159 (56%)

Query:    49 FIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGG 108
             FIK SC +T YP  C++ LSS+AS IK    KL  TAL V++  A      V+ M    G
Sbjct:    37 FIKASCETTSYPDRCFQSLSSYASEIKKQPRKLAETALAVSIARAKSAKTYVSEMTDYKG 96

Query:   109 LRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQ---MADIKTWVSAAMTDE 165
             +   +   + DC EE+ D VD L  +   L +L +  + ED    +++++TW SAA+TDE
Sbjct:    97 ITKRQHEAVADCLEEMGDTVDRLSNSLKELKHLEEGDSGEDFWFCLSNVRTWTSAALTDE 156

Query:   166 DTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALIN 204
               CMD F    +   +K+ I+  IV + + TSN+LALIN
Sbjct:   157 TACMDGFGGKAMAGELKSLIRTHIVSVAEETSNALALIN 195

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0030599 "pectinesterase activity" evidence=IEA

GO:0046910 "pectinesterase inhibitor activity" evidence=ISS

GO:0009641 "shade avoidance" evidence=IEP

TAIR|locus:2033590 AT1G70720 [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 61/165 (36%), Positives = 102/165 (61%)

Query:    48 NFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKG 107
             +FI+ +CN+TLYP LC+  LSS A++I+ DS +L   A+++ L   + T  L+ S  +  
Sbjct:    35 DFIRLACNTTLYPDLCFSTLSSFANSIQNDSNRLARVAISLTL---HNTLHLL-SYLQNA 90

Query:   108 GLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKED----QMADIKTWVSAAMT 163
               R     V+ DC E + D VD +R +   +  L  A    +    QM+++KTW+SAA+T
Sbjct:    91 YNRDHPTPVLRDCFENLKDAVDGMRGSMKQMKELVSASGSIESFRFQMSNVKTWLSAALT 150

Query:   164 DEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLSN 208
             DE TC D F++ +  +S+K+ +   + D++K+TSN+LAL+NR ++
Sbjct:   151 DEYTCTDGFKDVHEDDSIKDDVCSRVDDVKKLTSNALALVNRYAD 195

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0030599 "pectinesterase activity" evidence=IEA

GO:0046910 "pectinesterase inhibitor activity" evidence=ISS

TAIR|locus:2825395 AT1G23205 [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 63/168 (37%), Positives = 102/168 (60%)

Query:    48 NFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNL-KAANKTSAL--VTSMA 104
             +FI+TSCN+TLYP LC+  LSS +S++  D   L   A++V L K  +  S L  +T++ 
Sbjct:    32 DFIRTSCNTTLYPDLCFSSLSSFSSSVHNDPALLARAAISVTLTKTLDLASYLANITTLQ 91

Query:   105 KK----GGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKED---QMADIKTW 157
              +    G   P   AV  DC + + D V+E++ +   +  L    + E    QM++++TW
Sbjct:    92 PESNEDGAHHPTAAAVFHDCFDNLKDAVEEMKGSMKQMRELVSTGSLESFRFQMSNVQTW 151

Query:   158 VSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINR 205
             +SAA+TDE+TC D F++ +  E  K+ I   + D++K+TSN+LAL+NR
Sbjct:   152 LSAALTDEETCTDGFKDIH-DEPRKDDICARVDDVKKMTSNALALVNR 198

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0030599 "pectinesterase activity" evidence=IEA

GO:0046910 "pectinesterase inhibitor activity" evidence=ISS

TAIR|locus:2099545 AT3G47380 [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 65/195 (33%), Positives = 106/195 (54%)

Query:    13 RLFFALTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHAS 72
             ++F+ L  L L+S    T + ++  A   S +   NFI+ SC +T YP +C   L+ +A+
Sbjct:     4 QIFYTL-FLFLLSTAILTASSSAPRAAITSKRAI-NFIQASCKATTYPTVCVNSLTGYAN 61

Query:    73 TIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELR 132
             +I+T   +L  TAL V +  A  T   V  + +   L+  E   ++DC EEI D VD L 
Sbjct:    62 SIQTSPRRLAETALNVTVTQAQSTKVFVWRLGRFTSLKKREIQAVKDCIEEIHDAVDRLT 121

Query:   133 KASNVLDNLRDALNKED---QMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSI 189
              + + +     A  ++     M++ +TW SAA+T+ +TC D F    +   VKN ++  I
Sbjct:   122 MSIHEVKMCGSAKGRDQFWFHMSNAQTWTSAALTNANTCSDGFAGRVMDGRVKNSVRARI 181

Query:   190 VDLRKITSNSLALIN 204
             ++L + TSN+LALIN
Sbjct:   182 LNLGRGTSNALALIN 196

GO:0004857 "enzyme inhibitor activity" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0030599 "pectinesterase activity" evidence=IEA

GO:0046910 "pectinesterase inhibitor activity" evidence=ISS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	208
smart00856	148	smart00856, PMEI, Plant invertase/pectin methylest	8e-33
pfam04043	145	pfam04043, PMEI, Plant invertase/pectin methyleste	2e-30
TIGR01614	178	TIGR01614, PME_inhib, pectinesterase inhibitor dom	1e-25
PLN02313	587	PLN02313, PLN02313, Pectinesterase/pectinesterase	2e-20
PLN02745	596	PLN02745, PLN02745, Putative pectinesterase/pectin	1e-18
PLN02314	586	PLN02314, PLN02314, pectinesterase	6e-17
PLN02484	587	PLN02484, PLN02484, probable pectinesterase/pectin	6e-15
PLN02468	565	PLN02468, PLN02468, putative pectinesterase/pectin	4e-14
PLN02990	572	PLN02990, PLN02990, Probable pectinesterase/pectin	2e-13
PLN02506	537	PLN02506, PLN02506, putative pectinesterase/pectin	4e-11
PLN02217	670	PLN02217, PLN02217, probable pectinesterase/pectin	4e-11
PLN02416	541	PLN02416, PLN02416, probable pectinesterase/pectin	4e-10
PLN02713	566	PLN02713, PLN02713, Probable pectinesterase/pectin	6e-10
PLN02698	497	PLN02698, PLN02698, Probable pectinesterase/pectin	1e-09
PLN02933	530	PLN02933, PLN02933, Probable pectinesterase/pectin	5e-09
PLN02170	529	PLN02170, PLN02170, probable pectinesterase/pectin	3e-08
PLN02201	520	PLN02201, PLN02201, probable pectinesterase/pectin	7e-08
PLN03043	538	PLN03043, PLN03043, Probable pectinesterase/pectin	6e-07
PLN02301	548	PLN02301, PLN02301, pectinesterase/pectinesterase	4e-06
PLN02197	588	PLN02197, PLN02197, pectinesterase	0.001

>gnl|CDD|214860 smart00856, PMEI, Plant invertase/pectin methylesterase inhibitor

 Score =  115 bits (289), Expect = 8e-33
 Identities = 63/159 (39%), Positives = 85/159 (53%), Gaps = 11/159 (6%)

Query: 44  KIYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSM 103
                 I + C ST YP  C   LSS  S+  TD   L   A+ V L  A KT + ++ +
Sbjct: 1   APTSKLIDSICKSTDYPDFCVSSLSSDPSSSATDPKDLAKIAIKVALSQATKTLSFISKL 60

Query: 104 AKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMT 163
            KK    P  KA ++DC E  DD VD L KA   L        K     D+ TW+SAA+T
Sbjct: 61  LKK-TKDPRLKAALKDCLELYDDAVDSLEKALEEL--------KSGDYDDVATWLSAALT 111

Query: 164 DEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLAL 202
           D+DTC+D FEEN+  + VK+ + K   +L K+TSN+LA+
Sbjct: 112 DQDTCLDGFEEND--DKVKSPLTKRNDNLEKLTSNALAI 148

This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical. Length = 148

>gnl|CDD|217858 pfam04043, PMEI, Plant invertase/pectin methylesterase inhibitor

 Score =  108 bits (272), Expect = 2e-30
 Identities = 59/156 (37%), Positives = 83/156 (53%), Gaps = 11/156 (7%)

Query: 47  KNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKK 106
            + IK  C  T  P LC   LSS   +   D   L   A+   L  A KT A ++S+ KK
Sbjct: 1   SDLIKAICKKTDDPDLCVSSLSSDPRSAAADPRGLARAAIKAALSNATKTLAFISSLLKK 60

Query: 107 GGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDED 166
               P  KA ++DC E  DD VD+L+ A        +AL   D   D +TW+SAA+T++D
Sbjct: 61  AK-DPRLKAALDDCVELYDDAVDDLQDA-------LEALKSGD-YDDARTWLSAALTNQD 111

Query: 167 TCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLAL 202
           TC D FEE      +K+ + K   ++RK+TSN+LA+
Sbjct: 112 TCEDGFEEKGS--GIKSPLAKRNDNVRKLTSNALAI 145

This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein. It is also found at the N-termini of PMEs predicted from DNA sequences (personal obs:C Yeats), suggesting that both PMEs and their inhibitor are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical. Length = 145

>gnl|CDD|233492 TIGR01614, PME_inhib, pectinesterase inhibitor domain

 Score = 97.5 bits (243), Expect = 1e-25
 Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 21/193 (10%)

Query: 15  FFALTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHASTI 74
                +LL +            T+ SNSL   ++ IK  C  T YP  C   L S  S+ 
Sbjct: 7   LLLFLLLLSLV----------ATSSSNSLNATQSLIKRICKKTEYPNFCISTLKSDPSSA 56

Query: 75  KTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKA 134
           K D   L N +++  L  A+ T   ++         P +K+ +EDC E   D VD L KA
Sbjct: 57  KADLQGLANISVSAALSNASDTLDHISK-LLLTKGDPRDKSALEDCVELYSDAVDALDKA 115

Query: 135 SNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRK 194
                 L    +K    +D +TW+S+A+TD  TC D FEE  +   VK+ + K   +++K
Sbjct: 116 ------LASLKSK--DYSDAETWLSSALTDPSTCEDGFEE--LGGIVKSPLTKRNNNVKK 165

Query: 195 ITSNSLALINRLS 207
           ++S +LA+I  L+
Sbjct: 166 LSSITLAIIKMLT 178

This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by This model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family. Length = 178

>gnl|CDD|177947 PLN02313, PLN02313, Pectinesterase/pectinesterase inhibitor

 Score = 88.2 bits (218), Expect = 2e-20
 Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 5/200 (2%)

Query: 14  LFFALTVLLLISNINPTLAGTSTTAKSNSLKIYKN----FIKTSCNSTLYPALCYKYLSS 69
           L  A   LLL++ +    AGT+   K+  +    +     +K+ C+STLYP LC+  +++
Sbjct: 22  LSSAAIALLLVAAVVGIAAGTTNQNKNRKITTLSSTSHAVLKSVCSSTLYPELCFSAVAA 81

Query: 70  HASTIKTDSVKLCNTALTVNLKAANKTSALVTSM-AKKGGLRPAEKAVIEDCNEEIDDCV 128
                 T   ++   +L +  KA       V  + AK+ GL P E   + DC E ID+ +
Sbjct: 82  TGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETL 141

Query: 129 DELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKS 188
           DEL  A   L       +      D+KT +S+A+T++ TC+D F  ++    V+  + K 
Sbjct: 142 DELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKG 201

Query: 189 IVDLRKITSNSLALINRLSN 208
            V +  + SN+LA+I  ++ 
Sbjct: 202 QVHVEHMCSNALAMIKNMTE 221

Length = 587

>gnl|CDD|178346 PLN02745, PLN02745, Putative pectinesterase/pectinesterase inhibitor

 Score = 83.4 bits (206), Expect = 1e-18
 Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 11/160 (6%)

Query: 50  IKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGL 109
           I+T CN+TLY   C   L     T K  S+      L   +KA N     V         
Sbjct: 82  IQTVCNATLYKQTCENTLKK--GTEKDPSLAQPKDLLKSAIKAVNDDLDKVLKKVLSFKF 139

Query: 110 -RPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNK-EDQMADIKTWVSAAMTDEDT 167
             P EK  IEDC   ++D  +EL+ +   +  + D +NK    + D+  W+SA M+ ++T
Sbjct: 140 ENPDEKDAIEDCKLLVEDAKEELKAS---ISRINDEVNKLAKNVPDLNNWLSAVMSYQET 196

Query: 168 CMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLS 207
           C+D F E      +K++++K+    +++TSNSLA+++ L+
Sbjct: 197 CIDGFPEGK----LKSEMEKTFKSSQELTSNSLAMVSSLT 232

Length = 596

>gnl|CDD|215179 PLN02314, PLN02314, pectinesterase

 Score = 77.9 bits (192), Expect = 6e-17
 Identities = 54/218 (24%), Positives = 107/218 (49%), Gaps = 14/218 (6%)

Query: 2   EARSFTIPSCSRLF-FALTVLLLISNINPTLAGTSTTA-KSNSLKIYKN------FIKTS 53
           E ++F   +  RL    ++V++L++ I   + GT     K+ S             +K  
Sbjct: 17  EEQAFRRKTRKRLIIIVVSVVVLVAIIIGAVVGTVVHKRKNESNPSPPPELTPATSLKAV 76

Query: 54  CNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAE 113
           C+ T YP  C   +SS  ++  TD   L   +L V +   +K S L   +  +       
Sbjct: 77  CSVTRYPESCISSISSLPTSNTTDPETLFKLSLKVAIDELSKLSDLPQKLINET-NDERL 135

Query: 114 KAVIEDCNEEIDDCVDELRKA-SNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEF 172
           K+ +  C    DD +D L  + S++     + +    ++ D+KTW+SA +TD++TC+D  
Sbjct: 136 KSALRVCETLFDDAIDRLNDSISSMQVGEGEKILSSSKIDDLKTWLSATITDQETCIDAL 195

Query: 173 EENNVRE----SVKNKIKKSIVDLRKITSNSLALINRL 206
           +E +  +    ++ N++K ++ +  + TSNSLA+++++
Sbjct: 196 QELSQNKYANSTLTNEVKTAMSNSTEFTSNSLAIVSKI 233

Length = 586

>gnl|CDD|178102 PLN02484, PLN02484, probable pectinesterase/pectinesterase inhibitor

 Score = 72.2 bits (177), Expect = 6e-15
 Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 8/154 (5%)

Query: 50  IKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMA-KKGG 108
           I  +C+ T +P LC   L     ++      L + +  + L+  +K  AL  S       
Sbjct: 76  ISKTCSKTRFPNLCVDSLLDFPGSLTASESDLIHISFNMTLQHFSK--ALYLSSTISYVQ 133

Query: 109 LRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTC 168
           + P  ++  + C E +DD VD L +A + +       + +D +    TW+SAA+T+ DTC
Sbjct: 134 MPPRVRSAYDSCLELLDDSVDALSRALSSVVPSSGGGSPQDVV----TWLSAALTNHDTC 189

Query: 169 MDEFEENNVRESVKNKIKKSIVDLRKITSNSLAL 202
            + F+  N  E VK+++  ++ DL ++ SN LA+
Sbjct: 190 TEGFDGVNGGE-VKDQMTGALKDLSELVSNCLAI 222

Length = 587

>gnl|CDD|178087 PLN02468, PLN02468, putative pectinesterase/pectinesterase inhibitor

 Score = 69.9 bits (171), Expect = 4e-14
 Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 18/199 (9%)

Query: 17  ALTVLLLISNINPTLAGTSTTAKSNSLKIYKN-------FIKTSCNSTLYPALCYKYLSS 69
           +L+ ++L++ +   + GT  TA S + +   N        +K  C+ TLY   CY+ L+ 
Sbjct: 29  SLSSIILVAIVVAAVVGT--TASSGNSEKTGNNGKSISTSVKAVCDVTLYKDSCYETLAP 86

Query: 70  HASTIKTDSVKLCNTALTVNLKAANKTS-ALVTSMAKKGGLRPAEKAVIEDCNEEIDDCV 128
                +    +L   A+ V +   +K S A   S    G       A +  C E +D  +
Sbjct: 87  APKASQLQPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTNAALNACQELLDLAI 146

Query: 129 DELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKS 188
           D L   +N L +    ++  D + D++TW+S+A T ++TC+D   E N++   +N +K S
Sbjct: 147 DNL---NNSLTSSGG-VSVLDNVDDLRTWLSSAGTYQETCIDGLAEPNLKSFGENHLKNS 202

Query: 189 IVDLRKITSNSLALINRLS 207
                ++TSNSLA+I  + 
Sbjct: 203 ----TELTSNSLAIITWIG 217

Length = 565

>gnl|CDD|215535 PLN02990, PLN02990, Probable pectinesterase/pectinesterase inhibitor

 Score = 67.7 bits (165), Expect = 2e-13
 Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 18/186 (9%)

Query: 34  TSTTAKSNSLKIYKNFIKTS-------CNSTLYPALCYKYLSSHASTIKTDSVKLCNTAL 86
           TS     NS KI    IKT+       C  T Y   C   L   AS   T  + L     
Sbjct: 33  TSRNTSHNSEKIVPVQIKTTTKAVEAVCAPTDYKETCVNSLMK-ASPDSTQPLDLIKLGF 91

Query: 87  TVNLKAAN----KTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLR 142
            V +++ N    K S  + + A      P  K  +E C + ++D  D+L+K  +  D   
Sbjct: 92  NVTIRSINDSIKKASGELKAKAAND---PETKGALELCEKLMNDATDDLKKCLDNFDGF- 147

Query: 143 DALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLAL 202
                ED + D++ W+S ++  + TCMD FEE  ++ ++   + K     R++TSN LA+
Sbjct: 148 SIDQIEDFVEDLRVWLSGSIAYQQTCMDTFEE--IKSNLSQDMLKIFKTSRELTSNGLAM 205

Query: 203 INRLSN 208
           I  +SN
Sbjct: 206 ITNISN 211

Length = 572

>gnl|CDD|215280 PLN02506, PLN02506, putative pectinesterase/pectinesterase inhibitor

 Score = 61.1 bits (148), Expect = 4e-11
 Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 12/195 (6%)

Query: 15  FFALTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHASTI 74
           F  + +LL +         T++++    L  ++  I  +C      + C   +S+  + +
Sbjct: 6   FLLILMLLPVH---LESLETTSSSPYQELN-FQALIAQACQFVENHSSC---VSNIQAEL 58

Query: 75  KTDSVKLCNTALTVNLKAANKTSALVTSMAKKG---GLRPAEKAVIEDCNEEIDDCVDEL 131
           K    +  ++ L+  LKA    + L   M  K     +   E+  IEDC E +D  V EL
Sbjct: 59  KKSGPRTPHSVLSAALKATLDEARLAIDMITKFNALSISYREQVAIEDCKELLDFSVSEL 118

Query: 132 RKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVD 191
             +   ++ +R   +      ++K W+SAA++++DTC++ FE  +    ++N IK S+  
Sbjct: 119 AWSLLEMNKIRAGHDNVAYEGNLKAWLSAALSNQDTCLEGFEGTDRH--LENFIKGSLKQ 176

Query: 192 LRKITSNSLALINRL 206
           + ++ SN LA+  +L
Sbjct: 177 VTQLISNVLAMYTQL 191

Length = 537

>gnl|CDD|215130 PLN02217, PLN02217, probable pectinesterase/pectinesterase inhibitor

 Score = 61.3 bits (148), Expect = 4e-11
 Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 21/202 (10%)

Query: 17  ALTVLLLISNINPTLAGTSTTAKSNS----LKIYKNFIKTSCNSTLYPALCYKYLSSHAS 72
           +++ +LLIS +     G S     N     +      IK  C  T Y   C   L   A 
Sbjct: 19  SISSVLLISMVVAVTIGVSVNKSDNEGKGEITTSVKAIKDVCAPTDYKETCEDTLRKDAK 78

Query: 73  TIKTDSVKLCNTALTVNLKA---ANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVD 129
              +D ++L  TA    +K      K S  +  + K     P  K  ++ C E +D  + 
Sbjct: 79  N-TSDPLELVKTAFNATMKQISDVAKKSQTMIELQKD----PRTKMALDQCKELMDYAIG 133

Query: 130 ELRKASNVLDNLRDALNKEDQ-MADIKTWVSAAMTDEDTCMDEFE--ENNVRESVKNKIK 186
           EL K+   L       +K D+ +  ++ W+SA ++ E TC+D F+  + N  E++K  +K
Sbjct: 134 ELSKSFEELGKFE--FHKVDEALIKLRIWLSATISHEQTCLDGFQGTQGNAGETIKKALK 191

Query: 187 KSIVDLRKITSNSLALINRLSN 208
            ++    ++T N LA+++ +SN
Sbjct: 192 TAV----QLTHNGLAMVSEMSN 209

Length = 670

>gnl|CDD|178037 PLN02416, PLN02416, probable pectinesterase/pectinesterase inhibitor

 Score = 58.0 bits (140), Expect = 4e-10
 Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 8/192 (4%)

Query: 18  LTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHAS-TIKT 76
           L  LL  S    + A  S  + + SL  + + + + C ST YP  C+  L    S  I  
Sbjct: 9   LLFLLFFSPFFFSSAWYSNASYTTSLDPHLSSLTSFCKSTPYPDACFDSLKLSISINISP 68

Query: 77  DSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASN 136
           + +      L   +  A K + L++   +   +   ++  I+DC E     V  L+++  
Sbjct: 69  NILNFLLQTLQTAISEAGKLTNLLSGAGQSSNIIEKQRGTIQDCKELHQITVSSLKRS-- 126

Query: 137 VLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKIT 196
            +  ++   ++  ++AD + ++SAA+T+++TC++  +  +    +K K+  S     K  
Sbjct: 127 -VSRIQAGDSR--KLADARAYLSAALTNKNTCLEGLD--SASGPLKPKLVNSFTSTYKHV 181

Query: 197 SNSLALINRLSN 208
           SNSL+++ +   
Sbjct: 182 SNSLSMLPKSRR 193

Length = 541

>gnl|CDD|215383 PLN02713, PLN02713, Probable pectinesterase/pectinesterase inhibitor

 Score = 57.5 bits (139), Expect = 6e-10
 Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 14/197 (7%)

Query: 12  SRLFFALTVLLLIS-NINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSH 70
           S+L    T+ LL+    + + A     +   S         T CN+T  P+ C   L  +
Sbjct: 3   SKLILLTTLALLLLLFFSSSSASDPPPSTPVS-------PSTICNTTPDPSFCKSVLPHN 55

Query: 71  ASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAV--IEDCNEEIDDCV 128
                 D  +     +  +L  + K  +LV    K+     ++ A+  +EDC       +
Sbjct: 56  QPGNVYDYGRFS---VRKSLSQSRKFLSLVDRYLKRNSTLLSKSAIRALEDCQFLAGLNI 112

Query: 129 DELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKS 188
           D L  +   +++    L  + Q  D++T +SA +T++ TC+D  +  +   SV+N +   
Sbjct: 113 DFLLSSFETVNSSSKTL-SDPQADDVQTLLSAILTNQQTCLDGLQAASSAWSVRNGLAVP 171

Query: 189 IVDLRKITSNSLALINR 205
           + +  K+ S SLAL  +
Sbjct: 172 LSNDTKLYSVSLALFTK 188

Length = 566

>gnl|CDD|178301 PLN02698, PLN02698, Probable pectinesterase/pectinesterase inhibitor

 Score = 56.5 bits (136), Expect = 1e-09
 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 15/175 (8%)

Query: 37  TAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKT 96
            +  N    Y+N ++  C+ T YP+LC + L      ++ D V + +  +   +   N  
Sbjct: 12  ASSRNMPFAYQNEVQRECSFTKYPSLCVQTLRG----LRHDGVDIVSVLVNKTISETNLP 67

Query: 97  SALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKAS-NVLDNLRDALNK--EDQMAD 153
            +     + +  L  A           + D  + L K S   L     AL         D
Sbjct: 68  LSSSMGSSYQLSLEEATYT------PSVSDSCERLMKMSLKRLRQSLLALKGSSRKNKHD 121

Query: 154 IKTWVSAAMTDEDTCMDEFEENN--VRESVKNKIKKSIVDLRKITSNSLALINRL 206
           I+TW+SAA+T +  C D   ++      S  ++I + +  L ++ SNSLAL+NR+
Sbjct: 122 IQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVSNSLALVNRI 176

Length = 497

>gnl|CDD|178521 PLN02933, PLN02933, Probable pectinesterase/pectinesterase inhibitor

 Score = 55.0 bits (132), Expect = 5e-09
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 15/130 (11%)

Query: 84  TALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRD 143
           T L VNL ++N  S L T +     L   E+   EDC   +DD + +L  A + L +   
Sbjct: 62  TILKVNLASSN-FSDLQTRLGPN--LTHRERCAFEDCLGLLDDTISDLTTAISKLRSSSP 118

Query: 144 ALNKEDQMADIKTWVSAAMTDEDTCMDEF------EENNVRESVKNKIKKSIVDLRKITS 197
             N      D+   +S AMT++DTC+D F        N++   +   +K+SI+D+    S
Sbjct: 119 EFN------DVSMLLSNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLS 172

Query: 198 NSLALINRLS 207
           NSLA++  +S
Sbjct: 173 NSLAMLQNIS 182

Length = 530

>gnl|CDD|215114 PLN02170, PLN02170, probable pectinesterase/pectinesterase inhibitor

 Score = 52.7 bits (126), Expect = 3e-08
 Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 32/205 (15%)

Query: 3   ARSFTIPSCSRLFFALTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIK-----TSCNST 57
           A S +I +     F +T++ L+  I   L  ++    SNS   +  F +     +S  S+
Sbjct: 3   ASSSSISNHK---FPITLMFLL--ILNFLYLSAVVFASNSNSHFSKFSRHPNSDSSSRSS 57

Query: 58  LYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVI 117
              +    +LSS   ++      L   +L  NL  +++T    T         P     +
Sbjct: 58  PSSSSKQGFLSSVQESMNH---ALFARSLAFNLTLSHRTVQTHT-------FDP-----V 102

Query: 118 EDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNV 177
            DC E +DD +D L +   +        + +    D+ TW+SAA+T+++TC    +E + 
Sbjct: 103 NDCLELLDDTLDMLSRIVVIK-------HADHDEEDVHTWLSAALTNQETCEQSLQEKSS 155

Query: 178 RESVKNKIKKSIVDLRKITSNSLAL 202
                  +     +L  + +NSL L
Sbjct: 156 SYKHGLAMDFVARNLTGLLTNSLDL 180

Length = 529

>gnl|CDD|177852 PLN02201, PLN02201, probable pectinesterase/pectinesterase inhibitor

 Score = 51.4 bits (123), Expect = 7e-08
 Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 15/148 (10%)

Query: 57  TLYPALCYKYLSSHASTIKTDSVKLCNT----ALTVNLKAANKTSALVTSMAKKGGLRPA 112
           TL   +  K   S    ++ + +K+  +    +L   +    K  ++V+   K  G    
Sbjct: 12  TLSLCVSSKEAFSSTDLLQMECLKVPPSEFVSSLKTTVDVIRKVVSIVSQFDKVFGDSRL 71

Query: 113 EKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKE-DQMADIKTWVSAAMTDEDTCMDE 171
             A I DC + +D   +EL  + +   N     N   D  +D++TW+SAA++++DTC++ 
Sbjct: 72  SNA-ISDCLDLLDFAAEELSWSISASQNPNGKDNSTGDVGSDLRTWLSAALSNQDTCIEG 130

Query: 172 FEENNVRESVKNKIKKSIV--DLRKITS 197
           F+         N I K +V   L ++ S
Sbjct: 131 FDGT-------NGIVKKLVAGSLSQVGS 151

Length = 520

>gnl|CDD|178606 PLN03043, PLN03043, Probable pectinesterase/pectinesterase inhibitor; Provisional

 Score = 48.7 bits (116), Expect = 6e-07
 Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 23/164 (14%)

Query: 53  SCNSTLYPALCYKYLSSHASTIKTD------SVKLCNTALTVNLKAANKTSALVTSMA-- 104
           +C STLYP LC   LS+  S+          SVK C       LK A + S ++      
Sbjct: 5   ACKSTLYPKLCRSILSTVKSSPSDPYEYGKFSVKQC-------LKQARRLSKVINYYLTH 57

Query: 105 --KKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMAD-IKTWVSAA 161
             + G +   E   + DC E  +  VD L   S+    L+ A    D + + + + +S  
Sbjct: 58  ENQPGKMTHEEIGALADCGELSELNVDYLETISS---ELKSAELMTDALVERVTSLLSGV 114

Query: 162 MTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINR 205
           +T++ TC D   ++  + S    +   + +L ++ S SL L++ 
Sbjct: 115 VTNQQTCYDGLVDS--KSSFAAALGAPLGNLTRLYSVSLGLVSH 156

Length = 538

>gnl|CDD|215170 PLN02301, PLN02301, pectinesterase/pectinesterase inhibitor

 Score = 46.0 bits (109), Expect = 4e-06
 Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 27/206 (13%)

Query: 9   PSCSRLFFALTVLLLISNINPTLAGTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLS 68
                L   L+ + ++S+     A   +T  S+   +    ++T C+       C   +S
Sbjct: 16  SHHKTLCLVLSFVAILSSAALFTAPLISTNSSSPPSL----LQTLCDRAHDQDSCQAMVS 71

Query: 69  SHA--STIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLR-----PAEKAVIEDCN 121
             A  + +K + V L    L         T  L  ++     +R     P +KA + DC 
Sbjct: 72  EIATNTVMKLNRVDLLQVLLK------ESTPHLQNTIEMASEIRIRINDPRDKAALADCV 125

Query: 122 EEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESV 181
           E +D   D ++ +   L N+          AD  TW+S+ +T+  TC+D     + R+S+
Sbjct: 126 ELMDLSKDRIKDSVEALGNV-----TSKSHADAHTWLSSVLTNHVTCLDGINGPS-RQSM 179

Query: 182 KNKIKKSIVDLRKITSNSLALINRLS 207
           K  +K    DL      SLA++  +S
Sbjct: 180 KPGLK----DLISRARTSLAILVSVS 201

Length = 548

>gnl|CDD|177848 PLN02197, PLN02197, pectinesterase

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 13/154 (8%)

Query: 50  IKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALV--TSMAKKG 107
           ++  C ST   A C K L    S    D  KL    +     A  K+S     T      
Sbjct: 41  VQGICQSTSDKASCVKTLEPVKSD---DPNKLIKAFMLATKDAITKSSNFTGQTEGNMGS 97

Query: 108 GLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMAD-IKTWVSAAMTDED 166
            + P  KAV++ C       +++L   S +++ + + LN+     D +K W++     + 
Sbjct: 98  SISPNNKAVLDYCKRVFMYALEDL---STIVEEMGEDLNQIGSKIDQLKQWLTGVYNYQT 154

Query: 167 TCMDEFEENNVRESVKNKIKKSIVDLRKITSNSL 200
            C+D+ EE+++R+++   I  S +    +TSN++
Sbjct: 155 DCLDDIEEDDLRKTIGEGIANSKI----LTSNAI 184

Length = 588

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	208
PLN02314	586	pectinesterase	100.0
TIGR01614	178	PME_inhib pectinesterase inhibitor domain. This mo	100.0
PLN02468	565	putative pectinesterase/pectinesterase inhibitor	100.0
PLN02484	587	probable pectinesterase/pectinesterase inhibitor	100.0
PLN02313	587	Pectinesterase/pectinesterase inhibitor	100.0
smart00856	148	PMEI Plant invertase/pectin methylesterase inhibit	100.0
PLN02708	553	Probable pectinesterase/pectinesterase inhibitor	99.98
PLN02217	670	probable pectinesterase/pectinesterase inhibitor	99.98
PLN02990	572	Probable pectinesterase/pectinesterase inhibitor	99.98
PLN02506	537	putative pectinesterase/pectinesterase inhibitor	99.98
PLN02713	566	Probable pectinesterase/pectinesterase inhibitor	99.97
PLN02416	541	probable pectinesterase/pectinesterase inhibitor	99.97
PLN02745	596	Putative pectinesterase/pectinesterase inhibitor	99.97
PLN02197	588	pectinesterase	99.97
PLN02995	539	Probable pectinesterase/pectinesterase inhibitor	99.97
PLN02301	548	pectinesterase/pectinesterase inhibitor	99.97
PF04043	152	PMEI: Plant invertase/pectin methylesterase inhibi	99.97
PLN02698	497	Probable pectinesterase/pectinesterase inhibitor	99.96
PLN03043	538	Probable pectinesterase/pectinesterase inhibitor;	99.96
PLN02933	530	Probable pectinesterase/pectinesterase inhibitor	99.91
PLN02201	520	probable pectinesterase/pectinesterase inhibitor	99.9
PLN02170	529	probable pectinesterase/pectinesterase inhibitor	99.9
PLN02488	509	probable pectinesterase/pectinesterase inhibitor	99.88
PLN02916	502	pectinesterase family protein	99.69

>PLN02314 pectinesterase

Probab=100.00  E-value=1.8e-32  Score=253.10  Aligned_cols=160  Identities=26%  Similarity=0.458  Sum_probs=141.6

Q ss_pred             hHHHHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHHH
Q 042008           46 YKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEID  125 (208)
Q Consensus        46 ~~~~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely~  125 (208)
                      +...|+.+|+.|+||++|+++|+++|.+...+|++|++++++++++++.++...++++... ..+++.+.||+||+|+|+
T Consensus        69 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~al~vti~~a~~a~~~~~~L~~~-~~~~~~k~AL~DC~Elld  147 (586)
T PLN02314         69 PATSLKAVCSVTRYPESCISSISSLPTSNTTDPETLFKLSLKVAIDELSKLSDLPQKLINE-TNDERLKSALRVCETLFD  147 (586)
T ss_pred             HHHHHHHhccCCCChHHHHHHHhcccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHHHH
Confidence            5579999999999999999999999988788999999999999999999999999988754 578899999999999999


Q ss_pred             HHHHHHHHHHHHhhhhhhccc--hhhhHhHHHHHHHHhhcchhHhHHhhccCCc----chhhHHHHHHHHHHHHHHHHHH
Q 042008          126 DCVDELRKASNVLDNLRDALN--KEDQMADIKTWVSAAMTDEDTCMDEFEENNV----RESVKNKIKKSIVDLRKITSNS  199 (208)
Q Consensus       126 ~a~~~L~~a~~~l~~~~~~~~--~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~----~~~v~~~l~~~~~~~~~L~sna  199 (208)
                      +++++|++++.+|+..++ ..  +.+.++|++||||||||||+||+|||++.+.    .+.+++.|...+.++.||+||+
T Consensus       148 dAid~L~~Sl~~l~~~~~-~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLtSNa  226 (586)
T PLN02314        148 DAIDRLNDSISSMQVGEG-EKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFTSNS  226 (586)
T ss_pred             HHHHHHHHHHHHHhhccc-ccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999975332 11  2456899999999999999999999986643    3568889999999999999999


Q ss_pred             HHHHHhhc
Q 042008          200 LALINRLS  207 (208)
Q Consensus       200 LAiv~~ls  207 (208)
                      |||++++.
T Consensus       227 LAIi~~l~  234 (586)
T PLN02314        227 LAIVSKIL  234 (586)
T ss_pred             HHHHhhhc
Confidence            99999865

>TIGR01614 PME_inhib pectinesterase inhibitor domain

Probab=100.00  E-value=1e-31  Score=214.62  Aligned_cols=151  Identities=34%  Similarity=0.526  Sum_probs=138.3

Q ss_pred             hhHHHHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHH
Q 042008           45 IYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEI  124 (208)
Q Consensus        45 ~~~~~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely  124 (208)
                      .....|+.+|++|+||++|+.+|.++|++...|+++|+.++++++..++..+..++.++.++. .++..+.++++|.++|
T Consensus        27 ~~~~~i~~~C~~t~~~~~C~~~L~~~~~~~~ad~~~la~~ai~~a~~~~~~~~~~i~~l~~~~-~~~~~~~al~~C~~~y  105 (178)
T TIGR01614        27 ATQSLIKRICKKTEYPNFCISTLKSDPSSAKADLQGLANISVSAALSNASDTLDHISKLLLTK-GDPRDKSALEDCVELY  105 (178)
T ss_pred             chHHHHHHHHcCCCChHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999887789999999999999999999999999987654 4788999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 042008          125 DDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALIN  204 (208)
Q Consensus       125 ~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~  204 (208)
                      ++++++|++++++++.+        .++|+++|||+|+++++||+|||.+.+  +.++++|...+.++.+|++|+|+|++
T Consensus       106 ~~a~~~L~~a~~~l~~~--------~~~d~~~~ls~a~~~~~tC~d~f~~~~--~~~~~~l~~~~~~~~~l~s~alai~~  175 (178)
T TIGR01614       106 SDAVDALDKALASLKSK--------DYSDAETWLSSALTDPSTCEDGFEELG--GIVKSPLTKRNNNVKKLSSITLAIIK  175 (178)
T ss_pred             HHHHHHHHHHHHHHHhc--------chhHHHHHHHHHHcccchHHHHhccCC--CCccchHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999863        378999999999999999999999764  34678899999999999999999998


Q ss_pred             hh
Q 042008          205 RL  206 (208)
Q Consensus       205 ~l  206 (208)
                      .+
T Consensus       176 ~~  177 (178)
T TIGR01614       176 ML  177 (178)
T ss_pred             hc
Confidence            75

This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.

>PLN02468 putative pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=6.3e-32  Score=248.33  Aligned_cols=154  Identities=25%  Similarity=0.396  Sum_probs=136.4

Q ss_pred             hHHHHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHhHHHH
Q 042008           46 YKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKG-GLRPAEKAVIEDCNEEI  124 (208)
Q Consensus        46 ~~~~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~-~~~~~~~~al~dC~ely  124 (208)
                      ....|+.+|+.|+||++|+++|.++|.+...+|++|++++++++++++.++...+.++.... ..+++.+.||+||+|+|
T Consensus        63 ~~~~Ik~~C~~T~Yp~lC~sSLs~~~~s~~~~p~~L~~~al~vti~~~~~a~~~~s~l~~~~~~~d~~~k~AL~DC~ELl  142 (565)
T PLN02468         63 ISTSVKAVCDVTLYKDSCYETLAPAPKASQLQPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTNAALNACQELL  142 (565)
T ss_pred             hhHHHHHhccCCCChHHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHH
Confidence            44699999999999999999999999877789999999999999999999998887776432 46889999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 042008          125 DDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALIN  204 (208)
Q Consensus       125 ~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~  204 (208)
                      ++++++|++++.++....   . .+.++|++||||||||||+||+|||++.    ++++.|.+.+.++.||+||+|||++
T Consensus       143 ddaid~L~~Sl~~l~~~~---~-~~~~dDl~TWLSAAlTnq~TClDGF~e~----~vk~~~~~~l~n~~eLtSNaLAIi~  214 (565)
T PLN02468        143 DLAIDNLNNSLTSSGGVS---V-LDNVDDLRTWLSSAGTYQETCIDGLAEP----NLKSFGENHLKNSTELTSNSLAIIT  214 (565)
T ss_pred             HHHHHHHHHHHHHHhccc---c-ccchHHHHHHHHHHhcchhhhhhhhccc----CchHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999987421   1 3467999999999999999999999864    4688899999999999999999999


Q ss_pred             hhc
Q 042008          205 RLS  207 (208)
Q Consensus       205 ~ls  207 (208)
                      .++
T Consensus       215 ~l~  217 (565)
T PLN02468        215 WIG  217 (565)
T ss_pred             ccc
Confidence            864

>PLN02484 probable pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=8.3e-32  Score=248.25  Aligned_cols=156  Identities=26%  Similarity=0.462  Sum_probs=136.7

Q ss_pred             hHHHHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHHH
Q 042008           46 YKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEID  125 (208)
Q Consensus        46 ~~~~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely~  125 (208)
                      +...|+.+|+.|.||++|+++|.++|.+...+|++|+++++++++.++.++......+.. ...+++.+.||+||+|+|+
T Consensus        72 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~slnvtl~~~~~a~~~s~~l~~-~~~~~r~k~AL~DClELld  150 (587)
T PLN02484         72 PTQAISKTCSKTRFPNLCVDSLLDFPGSLTASESDLIHISFNMTLQHFSKALYLSSTISY-VQMPPRVRSAYDSCLELLD  150 (587)
T ss_pred             hhHHHHHhccCCCChHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHH
Confidence            456999999999999999999999998777899999999999999999998766554443 4578899999999999999


Q ss_pred             HHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 042008          126 DCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINR  205 (208)
Q Consensus       126 ~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~~  205 (208)
                      +++++|++++.+|....   . ...++|++|||||||||++||+|||++.+ .++++++|.+.+.++.+|+||+|||++.
T Consensus       151 dAid~L~~Sl~~l~~~~---~-~~~~~DvkTWLSAALTnq~TClDGF~e~~-~~~vk~~m~~~l~~l~~LtSNALAIi~~  225 (587)
T PLN02484        151 DSVDALSRALSSVVPSS---G-GGSPQDVVTWLSAALTNHDTCTEGFDGVN-GGEVKDQMTGALKDLSELVSNCLAIFSA  225 (587)
T ss_pred             HHHHHHHHHHHHHhccc---c-ccchHHHHhHHHHHhccHhhHHHHhhccc-ccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999999998532   1 33579999999999999999999998653 2468999999999999999999999988


Q ss_pred             hc
Q 042008          206 LS  207 (208)
Q Consensus       206 ls  207 (208)
                      ++
T Consensus       226 ~~  227 (587)
T PLN02484        226 SN  227 (587)
T ss_pred             cc
Confidence            64

>PLN02313 Pectinesterase/pectinesterase inhibitor

Probab=100.00  E-value=1.5e-31  Score=246.82  Aligned_cols=162  Identities=29%  Similarity=0.515  Sum_probs=140.8

Q ss_pred             hHHHHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHhHHHH
Q 042008           46 YKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKG-GLRPAEKAVIEDCNEEI  124 (208)
Q Consensus        46 ~~~~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~-~~~~~~~~al~dC~ely  124 (208)
                      ....|+.+|+.|+||++|+++|++++.+...+|++|++++|+++++++.++...++++.... +.+++.+.||+||+|+|
T Consensus        58 ~~~~Iks~C~~T~YP~~C~ssLs~~~~~~~~~~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~~~l~~r~k~AL~DClELl  137 (587)
T PLN02313         58 SHAVLKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETI  137 (587)
T ss_pred             HhHHHHHhccCCCChHHHHHHHhccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHH
Confidence            45699999999999999999999988776779999999999999999999999999887533 57889999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 042008          125 DDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALIN  204 (208)
Q Consensus       125 ~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~  204 (208)
                      ++++|+|.+++.++........+...++|++||||||||||+||+|||++.+.++.+++.|...+.++.+|+||+|||++
T Consensus       138 ddavD~L~~Sl~~l~~~~~~~~~~~~~dDlqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALAIv~  217 (587)
T PLN02313        138 DETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIK  217 (587)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999853210122345799999999999999999999986544457899999999999999999999998


Q ss_pred             hhc
Q 042008          205 RLS  207 (208)
Q Consensus       205 ~ls  207 (208)
                      +++
T Consensus       218 ~~~  220 (587)
T PLN02313        218 NMT  220 (587)
T ss_pred             ccc
Confidence            864

>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor

Probab=100.00  E-value=1.7e-31  Score=206.82  Aligned_cols=146  Identities=43%  Similarity=0.649  Sum_probs=134.9

Q ss_pred             hHHHHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHHH
Q 042008           46 YKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEID  125 (208)
Q Consensus        46 ~~~~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely~  125 (208)
                      ....|+.+|++|+||++|+.+|.++|.+...|+++|++++++.++.++..+..++.++.+. +.++..+.++++|.++|+
T Consensus         3 ~~~~i~~~C~~T~~~~~C~~~L~~~~~~~~~d~~~l~~~ai~~~~~~a~~~~~~~~~l~~~-~~~~~~~~al~~C~~~y~   81 (148)
T smart00856        3 TSKLIDSICKSTDYPDFCVSSLSSDPSSSATDPKDLAKIAIKVALSQATKTLSFISSLLKK-TKDPRLKAALKDCLELYD   81 (148)
T ss_pred             HHHHHHHHhcCCCChHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHH
Confidence            5789999999999999999999999988889999999999999999999999999998764 578899999999999999


Q ss_pred             HHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 042008          126 DCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLAL  202 (208)
Q Consensus       126 ~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAi  202 (208)
                      +++++|++++.++..+        .++|+++|||+|+++++||+|||.+.+  +.++++|...+.++.+|++|+|+|
T Consensus        82 ~a~~~L~~a~~~l~~~--------~~~d~~~~lsaa~t~~~tC~d~f~~~~--~~~~~~l~~~~~~~~~l~s~aLai  148 (148)
T smart00856       82 DAVDSLEKALEELKSG--------DYDDVATWLSAALTDQDTCLDGFEEND--DKVKSPLTKRNDNLEKLTSNALAI  148 (148)
T ss_pred             HHHHHHHHHHHHHHhc--------chhHHHHHHHHHhcCcchHHhHhccCC--cchhHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999863        378999999999999999999998753  467899999999999999999986

This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.

>PLN02708 Probable pectinesterase/pectinesterase inhibitor

Probab=99.98  E-value=1.7e-31  Score=244.91  Aligned_cols=153  Identities=18%  Similarity=0.327  Sum_probs=130.2

Q ss_pred             hhHHHHHcccCCCCChhhHHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHH
Q 042008           45 IYKNFIKTSCNSTLYPALCYKYLSSHAS-TIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEE  123 (208)
Q Consensus        45 ~~~~~I~~~C~~T~~p~lC~~sL~~~~~-s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~el  123 (208)
                      .....|+.+|+.|+||++|+++|++++. ....++.++++++|+++++++.++...+..+......+.....|++||+|+
T Consensus        42 ~~~~~I~s~C~~T~YP~lC~sSLs~~~~~~~~~~p~~Li~aAL~vsl~~a~~a~~~v~~L~~~~~~~~~~~~AL~DC~EL  121 (553)
T PLN02708         42 STPPQILLACNATRFPDTCVSSLSNAGRVPPDPKPIQIIQSAISVSRENLKTAQSMVKSILDSSAGNVNRTTAATNCLEV  121 (553)
T ss_pred             CccHHHHHhccCCCCcHHHHHHHhhccCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHH
Confidence            5678999999999999999999999884 345689999999999999999999999998876432233335899999999


Q ss_pred             HHHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 042008          124 IDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALI  203 (208)
Q Consensus       124 y~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv  203 (208)
                      |++++++|++++.++...        .++|++||||||||||+||+|||.+.+..+.+++.| ..+.++.+|+||+|||+
T Consensus       122 lddavd~L~~Sl~~L~~~--------~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~-~~L~nvs~LtSNSLAmv  192 (553)
T PLN02708        122 LSNSEHRISSTDIALPRG--------KIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTM-SFLDSLIGLTSNALSMM  192 (553)
T ss_pred             HHHHHHHHHHHHHHhhhc--------chHHHHHHHHHHhccHhHHHHHhhccCccchHHHHH-HHHHHHHHHHHHHHHhh
Confidence            999999999999888641        479999999999999999999998654223566666 67899999999999999


Q ss_pred             Hhh
Q 042008          204 NRL  206 (208)
Q Consensus       204 ~~l  206 (208)
                      +++
T Consensus       193 ~~~  195 (553)
T PLN02708        193 ASY  195 (553)
T ss_pred             hcc
Confidence            974

>PLN02217 probable pectinesterase/pectinesterase inhibitor

Probab=99.98  E-value=1.2e-31  Score=248.72  Aligned_cols=158  Identities=25%  Similarity=0.447  Sum_probs=137.6

Q ss_pred             hhHHHHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHH
Q 042008           45 IYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEI  124 (208)
Q Consensus        45 ~~~~~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely  124 (208)
                      ...+.|+.+|+.|+||++|+++|..++ ....+|++|++++|+++++++.++...+.++... ..+++++.|++||+|+|
T Consensus        51 ~~~~~Ikt~C~sT~YP~lC~sSLs~~~-~~~~~p~dLi~aaL~vTl~a~~~a~~~~s~L~~~-~~~~r~k~AL~DClELl  128 (670)
T PLN02217         51 TSVKAIKDVCAPTDYKETCEDTLRKDA-KNTSDPLELVKTAFNATMKQISDVAKKSQTMIEL-QKDPRTKMALDQCKELM  128 (670)
T ss_pred             hHHHHHHHHhcCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCChHHHHHHHHHHHHH
Confidence            445699999999999999999999988 4567999999999999999999999888887442 46788999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 042008          125 DDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALIN  204 (208)
Q Consensus       125 ~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~  204 (208)
                      ++++|+|.+++.+++..+. ..+....+|++||||||||||+||+|||++.+  +.+++.|.+.+.++.+|+||+|||++
T Consensus       129 ddAvDeL~~Sl~~L~~~~~-~~~~~~~dDvqTWLSAALTnQdTClDGF~~~~--~~vk~~m~~~l~nvseLtSNALAmv~  205 (670)
T PLN02217        129 DYAIGELSKSFEELGKFEF-HKVDEALIKLRIWLSATISHEQTCLDGFQGTQ--GNAGETIKKALKTAVQLTHNGLAMVS  205 (670)
T ss_pred             HHHHHHHHHHHHHHhhccc-cccccchhHHHHHHHHHHhchhHHHHhhhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999974322 22334579999999999999999999998653  57889999999999999999999999


Q ss_pred             hhc
Q 042008          205 RLS  207 (208)
Q Consensus       205 ~ls  207 (208)
                      +++
T Consensus       206 ~ls  208 (670)
T PLN02217        206 EMS  208 (670)
T ss_pred             hcc
Confidence            864

>PLN02990 Probable pectinesterase/pectinesterase inhibitor

Probab=99.98  E-value=1.8e-31  Score=245.36  Aligned_cols=157  Identities=25%  Similarity=0.460  Sum_probs=136.4

Q ss_pred             hHHHHHcccCCCCChhhHHHhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHhHHH
Q 042008           46 YKNFIKTSCNSTLYPALCYKYLSS-HASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKK-GGLRPAEKAVIEDCNEE  123 (208)
Q Consensus        46 ~~~~I~~~C~~T~~p~lC~~sL~~-~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~-~~~~~~~~~al~dC~el  123 (208)
                      ....|+.+|+.|+||++|+++|.+ .+.  ..+|++|+++++++++++++++...+.++... .+.+++.+.|++||+|+
T Consensus        52 ~~~~Ik~~C~~T~YP~lC~ssLs~a~~~--~~~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~r~k~Al~DC~EL  129 (572)
T PLN02990         52 TTKAVEAVCAPTDYKETCVNSLMKASPD--STQPLDLIKLGFNVTIRSINDSIKKASGELKAKAANDPETKGALELCEKL  129 (572)
T ss_pred             hhHHHHHhhcCCCCcHHHHHHhhhcccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHH
Confidence            345999999999999999999998 443  46899999999999999999999888777643 35789999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 042008          124 IDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALI  203 (208)
Q Consensus       124 y~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv  203 (208)
                      |++++++|++++.+|+..+. ..+...++|++||||||||||+||+|||++.+  +++++.|.+.+.++.+|+||+|||+
T Consensus       130 lddAvdeL~~Sl~~l~~~~~-~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~--s~lk~~~~~~l~nv~~LtSNALAiv  206 (572)
T PLN02990        130 MNDATDDLKKCLDNFDGFSI-DQIEDFVEDLRVWLSGSIAYQQTCMDTFEEIK--SNLSQDMLKIFKTSRELTSNGLAMI  206 (572)
T ss_pred             HHHHHHHHHHHHHHHhhccc-ccccchhHHHHHHHHHHhccHhhHHHhhhccc--hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999985332 23344679999999999999999999998654  4789999999999999999999999


Q ss_pred             Hhhc
Q 042008          204 NRLS  207 (208)
Q Consensus       204 ~~ls  207 (208)
                      ++++
T Consensus       207 ~~~~  210 (572)
T PLN02990        207 TNIS  210 (572)
T ss_pred             hhhh
Confidence            9865

>PLN02506 putative pectinesterase/pectinesterase inhibitor

Probab=99.98  E-value=2.8e-31  Score=242.37  Aligned_cols=161  Identities=24%  Similarity=0.405  Sum_probs=137.0

Q ss_pred             hhhHHHHHcccCCCCChhhHHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHH
Q 042008           44 KIYKNFIKTSCNSTLYPALCYKYLSSHAST-IKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNE  122 (208)
Q Consensus        44 ~~~~~~I~~~C~~T~~p~lC~~sL~~~~~s-~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~e  122 (208)
                      +.....|+.+|+.|+||++|+++|+++... ...+|++|++++|+++++++.++...+.++... ..+++.+.|++||+|
T Consensus        31 ~~~~~~I~s~C~~T~YP~~C~ssLs~~~~~~~~~~p~~L~~aAL~vtl~~a~~a~~~v~~l~~~-~~~~r~~~Al~DC~E  109 (537)
T PLN02506         31 LNFQALIAQACQFVENHSSCVSNIQAELKKSGPRTPHSVLSAALKATLDEARLAIDMITKFNAL-SISYREQVAIEDCKE  109 (537)
T ss_pred             hhHHHHHHHHccCCCCcHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChHHHHHHHHHHH
Confidence            456679999999999999999999986433 457899999999999999999999999888543 467889999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 042008          123 EIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLAL  202 (208)
Q Consensus       123 ly~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAi  202 (208)
                      +|++++++|.+++.+++....+.......+|++|||||||||++||+|||++.+  +.+++.|...+.++.+|+||+|||
T Consensus       110 llddSvd~L~~Sl~el~~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~--~~~k~~v~~~l~nv~~LtSNALAi  187 (537)
T PLN02506        110 LLDFSVSELAWSLLEMNKIRAGHDNVAYEGNLKAWLSAALSNQDTCLEGFEGTD--RHLENFIKGSLKQVTQLISNVLAM  187 (537)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccccchhhHHhHHHHHhccHhHHHHhhhhcc--hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999864321011112358999999999999999999998754  568888999999999999999999


Q ss_pred             HHhhc
Q 042008          203 INRLS  207 (208)
Q Consensus       203 v~~ls  207 (208)
                      +++++
T Consensus       188 v~~l~  192 (537)
T PLN02506        188 YTQLH  192 (537)
T ss_pred             Hhhcc
Confidence            99875

>PLN02713 Probable pectinesterase/pectinesterase inhibitor

Probab=99.97  E-value=6.9e-31  Score=241.31  Aligned_cols=153  Identities=24%  Similarity=0.317  Sum_probs=132.9

Q ss_pred             HHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CCHHHHHHHHHhHHHHHH
Q 042008           49 FIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGG--LRPAEKAVIEDCNEEIDD  126 (208)
Q Consensus        49 ~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~--~~~~~~~al~dC~ely~~  126 (208)
                      .+..+|+.|+||++|+++|+..   ...+++++++++|++++.++..+...+.++....+  .+++.+.|++||+|+|++
T Consensus        34 ~~~s~C~~T~YP~~C~ssLs~s---~~~d~~~l~~aaL~~tl~~a~~a~~~vs~L~~~~~~~~~~r~k~AL~DC~ELldd  110 (566)
T PLN02713         34 SPSTICNTTPDPSFCKSVLPHN---QPGNVYDYGRFSVRKSLSQSRKFLSLVDRYLKRNSTLLSKSAIRALEDCQFLAGL  110 (566)
T ss_pred             CCccccCCCCChHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHH
Confidence            3566899999999999999862   24689999999999999999999999998876543  488999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 042008          127 CVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINR  205 (208)
Q Consensus       127 a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~~  205 (208)
                      ++|+|.+++.+++..+. ..+.+.++|++||||||||||+||+|||.+.+..+.+++.|...+.++.+|+||+|||++.
T Consensus       111 avD~L~~Sl~~l~~~~~-~~~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~~k~~v~~~l~nvt~LtSNaLAlv~~  188 (566)
T PLN02713        111 NIDFLLSSFETVNSSSK-TLSDPQADDVQTLLSAILTNQQTCLDGLQAASSAWSVRNGLAVPLSNDTKLYSVSLALFTK  188 (566)
T ss_pred             HHHHHHHHHHHHhhccc-cccccchhhHHHHHHHhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999985321 1234578999999999999999999999987655678888999999999999999999986

>PLN02416 probable pectinesterase/pectinesterase inhibitor

Probab=99.97  E-value=1.7e-30  Score=237.63  Aligned_cols=157  Identities=22%  Similarity=0.395  Sum_probs=134.1

Q ss_pred             hhhHHHHHcccCCCCChhhHHHhhhccCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHH
Q 042008           44 KIYKNFIKTSCNSTLYPALCYKYLSSHASTI-KTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNE  122 (208)
Q Consensus        44 ~~~~~~I~~~C~~T~~p~lC~~sL~~~~~s~-~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~e  122 (208)
                      ++..+.|+++|+.|+||++|+++|++++... ..++.+++.++++.++.++..+...+..+......+++.+.|++||.|
T Consensus        35 ~~~~~~Iks~C~~T~YP~lC~~sLss~~~~~~s~~~~~ll~~sL~~A~~~~~~~s~l~s~~~~~~~~~~~~k~AL~DC~E  114 (541)
T PLN02416         35 DPHLSSLTSFCKSTPYPDACFDSLKLSISINISPNILNFLLQTLQTAISEAGKLTNLLSGAGQSSNIIEKQRGTIQDCKE  114 (541)
T ss_pred             chHHHHHHHhcCCCCChHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHH
Confidence            4567799999999999999999999987532 456778999999999999988887776654333457888999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 042008          123 EIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLAL  202 (208)
Q Consensus       123 ly~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAi  202 (208)
                      +|++++|+|++++.+|+..+   .  +.++|++|||||||||++||+|||++.+  +.+++.|...+.++.||+||+|||
T Consensus       115 l~~dAvD~L~~Sl~~L~~~~---~--~~~~DvqTWLSAALT~q~TC~DGF~~~~--~~~~~~i~~~~~~v~qltSNALAl  187 (541)
T PLN02416        115 LHQITVSSLKRSVSRIQAGD---S--RKLADARAYLSAALTNKNTCLEGLDSAS--GPLKPKLVNSFTSTYKHVSNSLSM  187 (541)
T ss_pred             HHHHHHHHHHHHHHHHhhcc---c--cchhhHHHHHHHHhcchhhHHhhhhhcC--cchhhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999997532   1  3679999999999999999999998754  467889999999999999999999


Q ss_pred             HHhhc
Q 042008          203 INRLS  207 (208)
Q Consensus       203 v~~ls  207 (208)
                      ++.++
T Consensus       188 v~~~~  192 (541)
T PLN02416        188 LPKSR  192 (541)
T ss_pred             hcccc
Confidence            98764

>PLN02745 Putative pectinesterase/pectinesterase inhibitor

Probab=99.97  E-value=3.1e-30  Score=237.98  Aligned_cols=158  Identities=27%  Similarity=0.468  Sum_probs=137.5

Q ss_pred             CcchhhHHHHHcccCCCCChhhHHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 042008           41 NSLKIYKNFIKTSCNSTLYPALCYKYLSSHAS--TIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIE  118 (208)
Q Consensus        41 ~~~~~~~~~I~~~C~~T~~p~lC~~sL~~~~~--s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~  118 (208)
                      .+.....+.|+.+|+.|+||++|+++|.++..  +...+|++|++++|+++++++..+...+.++.   ..+++.+.|++
T Consensus        73 ~~~~~~~~~Ik~~C~~T~YP~~C~sSLs~~~~~~~~~~~p~~Ll~aAL~vtl~~~~~a~~~~~~l~---~~~~r~k~Al~  149 (596)
T PLN02745         73 SPVSQVDKIIQTVCNATLYKQTCENTLKKGTEKDPSLAQPKDLLKSAIKAVNDDLDKVLKKVLSFK---FENPDEKDAIE  149 (596)
T ss_pred             CCCchHHHHHHHhcCCCCChHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhc---cCCHHHHHHHH
Confidence            44456778999999999999999999998653  34578999999999999999999988887763   36889999999


Q ss_pred             HhHHHHHHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHH
Q 042008          119 DCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSN  198 (208)
Q Consensus       119 dC~ely~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~sn  198 (208)
                      ||+|+|++++++|++++.++.. +. ..+.+.++|++|||||||||++||+|||++.    .+++.|...+.++.+|+||
T Consensus       150 DC~ELlddAid~L~~Sl~~l~~-~~-~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~----~l~s~m~~~l~~~~eLtSN  223 (596)
T PLN02745        150 DCKLLVEDAKEELKASISRIND-EV-NKLAKNVPDLNNWLSAVMSYQETCIDGFPEG----KLKSEMEKTFKSSQELTSN  223 (596)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhh-cc-cccccchHHHHHHHHHHhccHhHHHhhhccc----chHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999975 22 2344578999999999999999999999863    5788999999999999999


Q ss_pred             HHHHHHhhc
Q 042008          199 SLALINRLS  207 (208)
Q Consensus       199 aLAiv~~ls  207 (208)
                      +|||++.++
T Consensus       224 ALAiv~~ls  232 (596)
T PLN02745        224 SLAMVSSLT  232 (596)
T ss_pred             HHHHHhhhh
Confidence            999999875

>PLN02197 pectinesterase

Probab=99.97  E-value=2.2e-30  Score=238.20  Aligned_cols=154  Identities=19%  Similarity=0.349  Sum_probs=132.7

Q ss_pred             hhHHHHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHhHH
Q 042008           45 IYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMA--KKGGLRPAEKAVIEDCNE  122 (208)
Q Consensus        45 ~~~~~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~--~~~~~~~~~~~al~dC~e  122 (208)
                      .....|+.+|+.|+||++|+++|++++   ..+|++|++++|++++++++++...+..+.  ..+..+++++.|++||.|
T Consensus        36 ~~~k~I~s~C~~T~YP~lC~ssLs~~~---s~~p~~L~~aaL~vtl~~~~~a~~~~s~l~~~~~~~~~~r~k~Al~DC~e  112 (588)
T PLN02197         36 PQMKAVQGICQSTSDKASCVKTLEPVK---SDDPNKLIKAFMLATKDAITKSSNFTGQTEGNMGSSISPNNKAVLDYCKR  112 (588)
T ss_pred             hhHHHHHHhcCCCCChHHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Confidence            345599999999999999999999988   358999999999999999999999888664  223468899999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 042008          123 EIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLAL  202 (208)
Q Consensus       123 ly~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAi  202 (208)
                      +|++++|+|.+++.+++.. . ..+....+|++||||||||||+||+|||.+.    .+++.|...+.++.+|+||+|||
T Consensus       113 Ll~davd~L~~Sl~~l~~~-~-~~~~~~~~DvqTWLSAALTnq~TClDGf~~~----~~k~~v~~~l~nv~~LtSNaLAi  186 (588)
T PLN02197        113 VFMYALEDLSTIVEEMGED-L-NQIGSKIDQLKQWLTGVYNYQTDCLDDIEED----DLRKTIGEGIANSKILTSNAIDI  186 (588)
T ss_pred             HHHHHHHHHHHHHHHHhhc-c-cccccchhhHHHHHHHHHhChhhhhccccCc----chHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999731 1 1223457999999999999999999999864    46788889999999999999999


Q ss_pred             HHhhc
Q 042008          203 INRLS  207 (208)
Q Consensus       203 v~~ls  207 (208)
                      +++++
T Consensus       187 v~~ls  191 (588)
T PLN02197        187 FHSVV  191 (588)
T ss_pred             hhccc
Confidence            98864

>PLN02995 Probable pectinesterase/pectinesterase inhibitor

Probab=99.97  E-value=3.4e-30  Score=235.58  Aligned_cols=156  Identities=22%  Similarity=0.305  Sum_probs=129.5

Q ss_pred             HHHHcccCCCCChhhHHHhhhccCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHHHH
Q 042008           48 NFIKTSCNSTLYPALCYKYLSSHASTIK-TDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDD  126 (208)
Q Consensus        48 ~~I~~~C~~T~~p~lC~~sL~~~~~s~~-~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely~~  126 (208)
                      ..|+.+|..|.||++|+++|.+++.+.. .++.+++++++++++.++.++...+.++... ..+++.+.|++||+|+|++
T Consensus        35 ~~Irs~C~~T~YP~lC~sSLs~~~~s~s~~~~~~l~~~~~~aAl~~a~sa~~~i~~l~~~-~~~~r~~~AL~DC~ELl~D  113 (539)
T PLN02995         35 TDIDGWCDKTPYPDPCKCYFKNHNGFRQPTQISEFRVMLVEAAMDRAISARDELTNSGKN-CTDFKKQAVLADCIDLYGD  113 (539)
T ss_pred             HHHHhhcCCCCChHHHHHHHhhccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCHHHHHHHHHHHHHHHH
Confidence            4999999999999999999999887533 4888999999999999999999999888553 3678899999999999999


Q ss_pred             HHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042008          127 CVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRL  206 (208)
Q Consensus       127 a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~~l  206 (208)
                      ++|+|++++.+++...+ ....+.++|++|||||||||++||+|||++.+..+.+++.+.  ..++.+|+||+|||++.+
T Consensus       114 AvD~L~~Sl~~l~~~~~-~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~~v~~~v~--~~~~~~ltSNaLAi~~~l  190 (539)
T PLN02995        114 TIMQLNRTLQGVSPKAG-AAKRCTDFDAQTWLSTALTNTETCRRGSSDLNVSDFITPIVS--NTKISHLISNCLAVNGAL  190 (539)
T ss_pred             HHHHHHHHHHHHhhccc-cccccchhhHHHHHHHHhcchhhhhhhhccccchhhhhhhhh--hhhHHHHHHHHHHHhhhh
Confidence            99999999999985321 111234689999999999999999999987654433444433  268999999999999886


Q ss_pred             c
Q 042008          207 S  207 (208)
Q Consensus       207 s  207 (208)
                      +
T Consensus       191 ~  191 (539)
T PLN02995        191 L  191 (539)
T ss_pred             c
Confidence            4

>PLN02301 pectinesterase/pectinesterase inhibitor

Probab=99.97  E-value=4.7e-30  Score=234.61  Aligned_cols=151  Identities=24%  Similarity=0.390  Sum_probs=133.0

Q ss_pred             hHHHHHcccCCCCChhhHHHhhhccCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHH
Q 042008           46 YKNFIKTSCNSTLYPALCYKYLSSHAST--IKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEE  123 (208)
Q Consensus        46 ~~~~I~~~C~~T~~p~lC~~sL~~~~~s--~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~el  123 (208)
                      ....|+.+|+.|+||++|+++|.+++..  ...+|.+|++++|+++++++..+...+.++.. ++.+++.+.|++||+|+
T Consensus        49 ~~~~Iks~C~~T~YP~~C~ssLs~~a~~~~~~~~p~~L~~aaL~vsl~~a~~a~~~vs~l~~-~~~~~~~~aAL~DC~EL  127 (548)
T PLN02301         49 PPSLLQTLCDRAHDQDSCQAMVSEIATNTVMKLNRVDLLQVLLKESTPHLQNTIEMASEIRI-RINDPRDKAALADCVEL  127 (548)
T ss_pred             chHHHHHHhcCCCChHHHHHHHhhccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCChHHHHHHHHHHHH
Confidence            4689999999999999999999998754  34589999999999999999999999998844 45788999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 042008          124 IDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALI  203 (208)
Q Consensus       124 y~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv  203 (208)
                      |++++|+|++++.+++....     ..++|++|||||||||++||+|||++.     .++.|...+.++.+|++|+|||+
T Consensus       128 l~davd~L~~Sl~~l~~~~~-----~~~~Dv~TWLSAALT~q~TC~DGF~~~-----~~~~~~~~l~n~~qL~SNsLAiv  197 (548)
T PLN02301        128 MDLSKDRIKDSVEALGNVTS-----KSHADAHTWLSSVLTNHVTCLDGINGP-----SRQSMKPGLKDLISRARTSLAIL  197 (548)
T ss_pred             HHHHHHHHHHHHHHhhcccc-----cchHHHHHHHHHHhcchhhHHhhhhhh-----hhhhHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999875321     246899999999999999999999864     25678888999999999999999


Q ss_pred             Hhhc
Q 042008          204 NRLS  207 (208)
Q Consensus       204 ~~ls  207 (208)
                      +.++
T Consensus       198 ~~l~  201 (548)
T PLN02301        198 VSVS  201 (548)
T ss_pred             cccc
Confidence            9865

>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues

Probab=99.97  E-value=3.8e-29  Score=193.99  Aligned_cols=147  Identities=37%  Similarity=0.598  Sum_probs=127.7

Q ss_pred             hHHHHHcccCCCCChh-hHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHH
Q 042008           46 YKNFIKTSCNSTLYPA-LCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEI  124 (208)
Q Consensus        46 ~~~~I~~~C~~T~~p~-lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely  124 (208)
                      ....|+.+|++|+||. +|+.+|.+++.....|+++|++++|++++.++..+..++.++.+..+.++..+.+|++|.++|
T Consensus         3 ~~~~I~~~C~~T~~~~~~C~~~L~~~~~~~~~d~~~l~~~av~~a~~~~~~a~~~~~~l~~~~~~~~~~~~~l~~C~~~y   82 (152)
T PF04043_consen    3 TSSLIQDICKSTPYPYNLCLSTLSSDPSSSAADPKELARIAVQAALSNATSASAFISKLLKNPSKDPNAKQALQDCQELY   82 (152)
T ss_dssp             -HHHHHHHHCTSS--HHHHHHHHHTCCCGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-S-THHHHHHHHHHHHHH
T ss_pred             hHHHHHHHhhCCCCCcHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHhhHHHHHHHHHH
Confidence            5789999999999777 999999999877889999999999999999999999999998876567899999999999999


Q ss_pred             HHHHHHHHHHHHHh--hhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 042008          125 DDCVDELRKASNVL--DNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLAL  202 (208)
Q Consensus       125 ~~a~~~L~~a~~~l--~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAi  202 (208)
                      ++++++|++++.+|  ..+        .++++++|||+|+++++||+|||.+..  ++++++|...+.++.+|++|+|+|
T Consensus        83 ~~a~~~l~~a~~~l~~~~~--------~~~~~~~~lsaa~~~~~tC~~~f~~~~--~~~~~~l~~~~~~~~~l~s~aLai  152 (152)
T PF04043_consen   83 DDAVDSLQRALEALNSKNG--------DYDDARTWLSAALTNQDTCEDGFEEAG--SPVKSPLVQRNDNVEKLSSNALAI  152 (152)
T ss_dssp             HHHHHHHHHHHHHH--HHT---------HHHHHHHHHHHHHHHHHHHHHC-TTS--SS--HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcccc--------hhHHHHHHHHHHHHHHHHHHHHhcccC--CCccchHHHHHHHHHHHHHHHhhC
Confidence            99999999999999  442        488999999999999999999995222  356889999999999999999997

This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....

>PLN02698 Probable pectinesterase/pectinesterase inhibitor

Probab=99.96  E-value=5e-29  Score=226.20  Aligned_cols=154  Identities=25%  Similarity=0.426  Sum_probs=134.6

Q ss_pred             hhHHHHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CHHHHHHHHHhHH
Q 042008           45 IYKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGL--RPAEKAVIEDCNE  122 (208)
Q Consensus        45 ~~~~~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~--~~~~~~al~dC~e  122 (208)
                      +....|+.+|+.|+||++|+++|++.+.    +|++|++++|++++.+++.+...+.++....+.  +++.+.+++||+|
T Consensus        20 ~~~~~I~~~C~~T~YP~~C~ssLs~~~~----~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~~r~~~Al~DC~E   95 (497)
T PLN02698         20 AYQNEVQRECSFTKYPSLCVQTLRGLRH----DGVDIVSVLVNKTISETNLPLSSSMGSSYQLSLEEATYTPSVSDSCER   95 (497)
T ss_pred             hHHHHHHHhccCCCChHHHHHHHhccCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcChHHHHHHHHHHH
Confidence            5788999999999999999999999774    899999999999999999999999988654333  3777899999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCc--chhhHHHHHHHHHHHHHHHHHHH
Q 042008          123 EIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNV--RESVKNKIKKSIVDLRKITSNSL  200 (208)
Q Consensus       123 ly~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~--~~~v~~~l~~~~~~~~~L~snaL  200 (208)
                      +|++++++|++++.+|.....     +.++|++|||||||||++||+|||.+...  .+++++.|.+.+.++.+|+||+|
T Consensus        96 ll~dsvd~L~~Sl~~l~~~~~-----~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~~~~~ltSNAL  170 (497)
T PLN02698         96 LMKMSLKRLRQSLLALKGSSR-----KNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVSNSL  170 (497)
T ss_pred             HHHHHHHHHHHHHHHHhhccc-----cchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999886321     35799999999999999999999964321  24688899999999999999999


Q ss_pred             HHHHhhc
Q 042008          201 ALINRLS  207 (208)
Q Consensus       201 Aiv~~ls  207 (208)
                      ||++.++
T Consensus       171 Amv~~l~  177 (497)
T PLN02698        171 ALVNRIT  177 (497)
T ss_pred             HHHhhhh
Confidence            9999875

>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional

Probab=99.96  E-value=1.1e-28  Score=225.81  Aligned_cols=149  Identities=26%  Similarity=0.418  Sum_probs=129.7

Q ss_pred             cccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCHHHHHHHHHhHHHHHHH
Q 042008           52 TSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKK----GGLRPAEKAVIEDCNEEIDDC  127 (208)
Q Consensus        52 ~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~----~~~~~~~~~al~dC~ely~~a  127 (208)
                      .+|+.|+||++|+++|++++.+ ..+|+++++.+|++++.++..+...+.++...    ++.+++.+.|++||+|+++++
T Consensus         4 ~~C~~T~YP~lC~ssLs~~~~~-~~~p~~l~~aaL~vtl~~a~~a~~~vs~l~~~~~~~~~~~~r~~~AL~DC~ELlddS   82 (538)
T PLN03043          4 LACKSTLYPKLCRSILSTVKSS-PSDPYEYGKFSVKQCLKQARRLSKVINYYLTHENQPGKMTHEEIGALADCGELSELN   82 (538)
T ss_pred             cccCCCCCcHHHHHHHhhccCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHH
Confidence            5799999999999999987755 35899999999999999999999999988632    246788899999999999999


Q ss_pred             HHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 042008          128 VDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINR  205 (208)
Q Consensus       128 ~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~~  205 (208)
                      +|+|.+++.+|+...  .......+|++||||||||||+||+|||.+.+  +.+++.|...+.++.+|+||+|||++.
T Consensus        83 vD~L~~Sl~~L~~~~--~~~~~~~~DvqTWLSAALTnqdTClDGF~~~~--~~~k~~i~~~l~nvt~LtSNaLAlv~~  156 (538)
T PLN03043         83 VDYLETISSELKSAE--LMTDALVERVTSLLSGVVTNQQTCYDGLVDSK--SSFAAALGAPLGNLTRLYSVSLGLVSH  156 (538)
T ss_pred             HHHHHHHHHHHhccc--cccccchhhHHHhHHHhhcChhhhhchhhccc--hhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999997532  11234578999999999999999999998654  468888999999999999999999985

>PLN02933 Probable pectinesterase/pectinesterase inhibitor

Probab=99.91  E-value=3e-23  Score=188.85  Aligned_cols=127  Identities=27%  Similarity=0.441  Sum_probs=111.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhhccchhhhHh
Q 042008           75 KTDSVKLCNTALTVNLKAANKTSALVTSMAKKG--GLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMA  152 (208)
Q Consensus        75 ~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~--~~~~~~~~al~dC~ely~~a~~~L~~a~~~l~~~~~~~~~~~~~~  152 (208)
                      ..+|++|++++|++++.++.++...+.++....  +.+++++.|++||+|+|++++++|++++.+++...      ..++
T Consensus        48 ~~~~~~L~~aaL~vtl~~a~~a~~~vs~L~~~~~~~l~~r~~~Al~DC~El~~davd~L~~S~~~l~~~~------~~~~  121 (530)
T PLN02933         48 TKTIPELIIADLNLTILKVNLASSNFSDLQTRLGPNLTHRERCAFEDCLGLLDDTISDLTTAISKLRSSS------PEFN  121 (530)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------cchh
Confidence            368899999999999999999999999886532  46889999999999999999999999999987521      1479


Q ss_pred             HHHHHHHHhhcchhHhHHhhccCC------cchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 042008          153 DIKTWVSAAMTDEDTCMDEFEENN------VRESVKNKIKKSIVDLRKITSNSLALINRLS  207 (208)
Q Consensus       153 d~~twLSAAlt~~~TC~Dgf~~~~------~~~~v~~~l~~~~~~~~~L~snaLAiv~~ls  207 (208)
                      |++|||||||||++||+|||++.+      +.+.+++.|.+.+.++.+|+||+|||+++++
T Consensus       122 Dv~TWLSAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~ls  182 (530)
T PLN02933        122 DVSMLLSNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNIS  182 (530)
T ss_pred             HHHHHHHHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            999999999999999999998654      2346888999999999999999999999765

>PLN02201 probable pectinesterase/pectinesterase inhibitor

Probab=99.90  E-value=7.3e-23  Score=186.30  Aligned_cols=125  Identities=22%  Similarity=0.336  Sum_probs=105.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhhc-cchhhhHhHHHHH
Q 042008           79 VKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDA-LNKEDQMADIKTW  157 (208)
Q Consensus        79 ~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely~~a~~~L~~a~~~l~~~~~~-~~~~~~~~d~~tw  157 (208)
                      ..+++++|++++++++++...+.++... ..+++.+.|++||+|++++++|+|++++.+|+...+. .......+|++||
T Consensus        38 ~~~~~~~L~~tl~~a~~a~~~vs~l~~~-~~~~r~~~Al~DC~ELl~davD~L~~Sl~eL~~~~~~~~~~~~~~~DvqTW  116 (520)
T PLN02201         38 PSEFVSSLKTTVDVIRKVVSIVSQFDKV-FGDSRLSNAISDCLDLLDFAAEELSWSISASQNPNGKDNSTGDVGSDLRTW  116 (520)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHH
Confidence            5788889999999999999999888653 3578899999999999999999999999999753210 0013357999999


Q ss_pred             HHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042008          158 VSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRL  206 (208)
Q Consensus       158 LSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~~l  206 (208)
                      |||||||++||+|||++.+  +.+++.|...+.++.+|+||+|||+++.
T Consensus       117 LSAALTnq~TClDGF~~~~--~~~k~~v~~~l~nvt~LtSNaLALv~~~  163 (520)
T PLN02201        117 LSAALSNQDTCIEGFDGTN--GIVKKLVAGSLSQVGSTVRELLTMVHPP  163 (520)
T ss_pred             HHhhhcchhhhhhhhhccc--cchhHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999999999999998754  4577888889999999999999999863

>PLN02170 probable pectinesterase/pectinesterase inhibitor

Probab=99.90  E-value=4.7e-23  Score=187.11  Aligned_cols=181  Identities=22%  Similarity=0.252  Sum_probs=123.2

Q ss_pred             CCCccccccchhHHHHHHHHHHHHHH--hccCCC--CCCCCCCCCcchhhHHHHHcccCCCCChhhHHHhhhccCCCCCC
Q 042008            1 MEARSFTIPSCSRLFFALTVLLLISN--INPTLA--GTSTTAKSNSLKIYKNFIKTSCNSTLYPALCYKYLSSHASTIKT   76 (208)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~I~~~C~~T~~p~lC~~sL~~~~~s~~~   76 (208)
                      |.+.+|.+|-+.+.++.+++|.+-.+  ..-..+  ..|.|.+........+.+++.    +||+.|+.+|++...+   
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~---   73 (529)
T PLN02170          1 MMASSSSISNHKFPITLMFLLILNFLYLSAVVFASNSNSHFSKFSRHPNSDSSSRSS----PSSSSKQGFLSSVQES---   73 (529)
T ss_pred             CCccccccccCccchhhHHHHHHHHHHHHHHHhhccCCCCCchhccCCCccccccCC----CCcchhhhhhhhhhcc---
Confidence            66788999988877666655544333  221111  111121110001123333333    9999999999976443   


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhhccchhhhHhHHHH
Q 042008           77 DSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKT  156 (208)
Q Consensus        77 ~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~t  156 (208)
                      -|..++..++++.+.......            ......|++||+|+|++++++|.++++....       .+..+|++|
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~Al~DC~ELlddavd~L~~S~~~~~~-------~~~~~DvqT  134 (529)
T PLN02170         74 MNHALFARSLAFNLTLSHRTV------------QTHTFDPVNDCLELLDDTLDMLSRIVVIKHA-------DHDEEDVHT  134 (529)
T ss_pred             ChHHHHHhhhHhhhhhhhhhc------------ccchhHHHHHHHHHHHHHHHHHHHHHHhhcc-------ccchhHHHH
Confidence            356677777777555221111            1122679999999999999999999965432       135899999


Q ss_pred             HHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 042008          157 WVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLS  207 (208)
Q Consensus       157 wLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~~ls  207 (208)
                      |||||||||+||+|||++.+....++..|...+.++.+|+||+|||+++++
T Consensus       135 WLSAALTnq~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~~  185 (529)
T PLN02170        135 WLSAALTNQETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSVK  185 (529)
T ss_pred             HHHHHHhchhhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            999999999999999987654445677788888999999999999998764

>PLN02488 probable pectinesterase/pectinesterase inhibitor

Probab=99.88  E-value=3.8e-22  Score=179.87  Aligned_cols=151  Identities=18%  Similarity=0.182  Sum_probs=126.2

Q ss_pred             HcccCCCCChhhHHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHh----HH
Q 042008           51 KTSCNSTLYPALCYKYLSSHA----STIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDC----NE  122 (208)
Q Consensus        51 ~~~C~~T~~p~lC~~sL~~~~----~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC----~e  122 (208)
                      ..+|..++||+.|...+....    .....++.+++.++|+.++.++..+...+.++...-..+++++.|++||    +|
T Consensus         2 ~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~dc~~~c~e   81 (509)
T PLN02488          2 IGVCKGYDDKQSCQNLLLELKTVSSSLSEMRCRDLLIIVLKNSVWRIDMAMIGVMEDTKLLEEMENDMLGVKEDTNLFEE   81 (509)
T ss_pred             ceecCCCCChHHHHHHHHhhhccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhHHHhHHHHHH
Confidence            357999999999999987755    3334568899999999999999999999988876542378899999999    99


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 042008          123 EIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLAL  202 (208)
Q Consensus       123 ly~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAi  202 (208)
                      +|++++++|.+++..+...+. .. ....+|++||||||||||+||+|||.+    +.++..|...+.++.+|+||+|||
T Consensus        82 l~~~~~~~l~~s~~~~~~~~~-~~-~~~~~d~~twLSa~lt~q~TC~dg~~~----~~~~~~~~~~l~~~~~~~sn~La~  155 (509)
T PLN02488         82 MMESAKDRMIRSVEELLGGES-PN-LGSYENVHTWLSGVLTSYITCIDEIGE----GAYKRRVEPELEDLISRARVALAI  155 (509)
T ss_pred             HHHHHHHHHHHHHHHhhcccc-cc-cCcHHHHHHHHHHhHhchhhHhccccC----cchHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999963211 11 123589999999999999999999953    257788888999999999999999


Q ss_pred             HHhhc
Q 042008          203 INRLS  207 (208)
Q Consensus       203 v~~ls  207 (208)
                      +..++
T Consensus       156 ~~~~~  160 (509)
T PLN02488        156 FISIS  160 (509)
T ss_pred             hcccc
Confidence            98764

>PLN02916 pectinesterase family protein

Probab=99.69  E-value=1.7e-16  Score=143.92  Aligned_cols=85  Identities=22%  Similarity=0.379  Sum_probs=70.1

Q ss_pred             CCHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHH
Q 042008          109 LRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKS  188 (208)
Q Consensus       109 ~~~~~~~al~dC~ely~~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~  188 (208)
                      .+-....|++||+|+|++++++|.+++..+...        ..+|++||||||||||+||+|||.+.+.   ..   ...
T Consensus        57 ~~~~~~~Al~DC~ELl~dSvd~L~~Sl~~~~~~--------~~~DvqTWLSAALTnq~TClDGf~~~~~---~~---~~~  122 (502)
T PLN02916         57 SYYNLGEALSDCEKLYDESEARLSKLLVSHENF--------TVEDARTWLSGVLANHHTCLDGLEQKGQ---GH---KPM  122 (502)
T ss_pred             CcccHhHHHHHHHHHHHHHHHHHHHHHHhhccC--------chHHHHHHHHHHHhCHhHHHHhhhhccc---cc---hHH
Confidence            345567899999999999999999999876531        3699999999999999999999986531   12   223


Q ss_pred             HHHHHHHHHHHHHHHHhhc
Q 042008          189 IVDLRKITSNSLALINRLS  207 (208)
Q Consensus       189 ~~~~~~L~snaLAiv~~ls  207 (208)
                      +.++.+|+||+|||+++++
T Consensus       123 v~nvt~ltSNaLAlv~~~~  141 (502)
T PLN02916        123 AHNVTFVLSEALALYKKSR  141 (502)
T ss_pred             HHHHHHHHHHHHHHhhhhh
Confidence            6799999999999998865

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	208
1x90_A	152	Crystal Structure Of Mutant Form B Of A Pectin Meth		5e-04
1x91_A	153	Crystal Structure Of Mutant Form A Of A Pectin Meth		6e-04
1x8z_A	153	Crystal Structure Of A Pectin Methylesterase Inhibi		6e-04

>pdb|1X90|A Chain A, Crystal Structure Of Mutant Form B Of A Pectin Methylesterase Inhibitor From Arabidopsis Length = 152

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 50  IKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGL 109
           + T C+ TL P+ C K+L++  ++    +  L  T L      A +T   + S+   GG+
Sbjct: 7   MSTICDKTLNPSFCLKFLNTKFASANLQA--LAKTTLDSTQARATQTLKKLQSII-DGGV 63
Query: 110 RPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCM 169
            P  K            CVDE   A   L+   + L   D M  +   VSAA+   DTC+
Sbjct: 64  DPRSKLAYR-------SCVDEYESAIGNLEEAFEHLASGDGMG-MNMKVSAALDGADTCL 115
Query: 170 DEFEE-NNVRESVKNKIK--KSIVDLRKITSNSL 200
           D+ +   +V  SV N  K  K++  +  + SN L
Sbjct: 116 DDVKRLRSVDSSVVNNSKTIKNLCGIALVISNML 149

>pdb|1X91|A Chain A, Crystal Structure Of Mutant Form A Of A Pectin Methylesterase Inhibitor From Arabidopsis Length = 153

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 50  IKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGL 109
           + T C+ TL P+ C K+L++  ++    +  L  T L      A +T   + S+   GG+
Sbjct: 8   MSTICDKTLNPSFCLKFLNTKFASANLQA--LAKTTLDSTQARATQTLKKLQSII-DGGV 64
Query: 110 RPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCM 169
            P  K            CVDE   A   L+   + L   D M  +   VSAA+   DTC+
Sbjct: 65  DPRSKLAYR-------SCVDEYESAIGNLEEAFEHLASGDGMG-MNMKVSAALDGADTCL 116
Query: 170 DEFEE-NNVRESVKNKIK--KSIVDLRKITSNSL 200
           D+ +   +V  SV N  K  K++  +  + SN L
Sbjct: 117 DDVKRLRSVDSSVVNNSKTIKNLCGIALVISNML 150

>pdb|1X8Z|A Chain A, Crystal Structure Of A Pectin Methylesterase Inhibitor From Arabidopsis Thaliana Length = 153

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 50  IKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGL 109
           + T C+ TL P+ C K+L++  ++    +  L  T L      A +T   + S+   GG+
Sbjct: 8   MSTICDKTLNPSFCLKFLNTKFASPNLQA--LAKTTLDSTQARATQTLKKLQSII-DGGV 64
Query: 110 RPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCM 169
            P  K            CVDE   A   L+   + L   D M  +   VSAA+   DTC+
Sbjct: 65  DPRSKLAYR-------SCVDEYESAIGNLEEAFEHLASGDGMG-MNMKVSAALDGADTCL 116
Query: 170 DEFEE-NNVRESVKNKIK--KSIVDLRKITSNSL 200
           D+ +   +V  SV N  K  K++  +  + SN L
Sbjct: 117 DDVKRLRSVDSSVVNNSKTIKNLCGIALVISNML 150

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	208
1xg2_B	153	Pectinesterase inhibitor; protein-protein complex,	3e-32
1x91_A	153	Invertase/pectin methylesterase inhibitor family p	2e-28
2cj4_A	150	Invertase inhibitor; protein binding, four-helix b	1e-25

>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis} Length = 153

 Score =  113 bits (284), Expect = 3e-32
 Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 12/162 (7%)

Query: 47  KNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKK 106
            + I   C  T  P+LC + L S   +   D   L   ++ +   +A +TS ++ S+  +
Sbjct: 3   NHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSIDIAQASAKQTSKIIASLTNQ 62

Query: 107 GGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDED 166
               P  K   E C+E   D +D L +A       +  L   D    +  + SAA     
Sbjct: 63  AT-DPKLKGRYETCSENYADAIDSLGQA-------KQFLTSGD-YNSLNIYASAAFDGAG 113

Query: 167 TCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLSN 208
           TC D FE      ++  ++ ++ + L  +    L + N L  
Sbjct: 114 TCEDSFEGPP---NIPTQLHQADLKLEDLCDIVLVISNLLPG 152

>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A Length = 153

 Score =  103 bits (258), Expect = 2e-28
 Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 14/161 (8%)

Query: 48  NFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKG 107
           + + T C+ TL P+ C K+L++  ++   +   L  T L      A +T   + S+   G
Sbjct: 6   SEMSTICDKTLNPSFCLKFLNTKFAS--ANLQALAKTTLDSTQARATQTLKKLQSIIDGG 63

Query: 108 GLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDT 167
            + P  K     C +E +  +  L +A   L               +   VSAA+   DT
Sbjct: 64  -VDPRSKLAYRSCVDEYESAIGNLEEAFEHL--------ASGDGMGMNMKVSAALDGADT 114

Query: 168 CMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLSN 208
           C+D+ +       V + +  +   ++ +   +L + N L  
Sbjct: 115 CLDDVKRLRS---VDSSVVNNSKTIKNLCGIALVISNMLPR 152

>2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B* Length = 150

 Score = 95.8 bits (238), Expect = 1e-25
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 14/160 (8%)

Query: 47  KNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKK 106
            N ++T+C +T    LC K L S   +   D   L    +      AN+ +  ++ +   
Sbjct: 4   NNLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHS 63

Query: 107 GGLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDED 166
                A K  +++C       +         L    +AL K D     +  +  +  D  
Sbjct: 64  NP-PAAWKGPLKNCAFSYKVILTAS------LPEAIEALTKGDP-KFAEDGMVGSSGDAQ 115

Query: 167 TCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRL 206
            C + F+        K+      + + +++    A++  L
Sbjct: 116 ECEEYFKG------SKSPFSALNIAVHELSDVGRAIVRNL 149

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	208
1xg2_B	153	Pectinesterase inhibitor; protein-protein complex,	100.0
1x91_A	153	Invertase/pectin methylesterase inhibitor family p	100.0
2cj4_A	150	Invertase inhibitor; protein binding, four-helix b	100.0

>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis}

Probab=100.00  E-value=3.2e-34  Score=222.16  Aligned_cols=149  Identities=24%  Similarity=0.423  Sum_probs=136.7

Q ss_pred             HHHHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHHHH
Q 042008           47 KNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDD  126 (208)
Q Consensus        47 ~~~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely~~  126 (208)
                      .+.|+.+|++|+||++|+++|.++|.+...|+++|+++++++++.++..+..++.++.+.. .+++.+.+++||.++|++
T Consensus         3 ~~~i~~~C~~T~~~~~C~~sL~~~~~~~~~~~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~-~~~~~~~al~dC~e~y~~   81 (153)
T 1xg2_B            3 NHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSIDIAQASAKQTSKIIASLTNQA-TDPKLKGRYETCSENYAD   81 (153)
T ss_dssp             CHHHHHHGGGSSCHHHHHHHHHTCTTGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHH
T ss_pred             HhHHHHHhcCCCChHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHH
Confidence            4689999999999999999999999887789999999999999999999999999987654 589999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042008          127 CVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRL  206 (208)
Q Consensus       127 a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~~l  206 (208)
                      ++++|++++.+++.+        .++|+++|||+|++|++||+|||.+.+   .++++|...+.++.+|++|+|+|++.+
T Consensus        82 a~~~L~~a~~~l~~~--------~~~d~~t~lSaAlt~~~tC~dgf~~~~---~~~~~l~~~~~~~~~l~s~aLai~~~l  150 (153)
T 1xg2_B           82 AIDSLGQAKQFLTSG--------DYNSLNIYASAAFDGAGTCEDSFEGPP---NIPTQLHQADLKLEDLCDIVLVISNLL  150 (153)
T ss_dssp             HHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHHHHHHHHCCSSS---CCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhC--------CHHHHHHHHHHHhcccchHHHHhccCC---CCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999863        378999999999999999999998764   356789999999999999999999987


Q ss_pred             c
Q 042008          207 S  207 (208)
Q Consensus       207 s  207 (208)
                      .
T Consensus       151 ~  151 (153)
T 1xg2_B          151 P  151 (153)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A

Probab=100.00  E-value=6e-34  Score=220.92  Aligned_cols=148  Identities=24%  Similarity=0.391  Sum_probs=133.9

Q ss_pred             hHHHHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHHH
Q 042008           46 YKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEID  125 (208)
Q Consensus        46 ~~~~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely~  125 (208)
                      ..+.|+.+|++|+||++|+++|  .|.+...|+++|+++++++++.++..+..++.++.+.. .+++.+.+|+||.++|+
T Consensus         4 ~~~~i~~~C~~T~~~~~C~~sL--~p~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~l~~~~-~~~~~~~al~dC~e~y~   80 (153)
T 1x91_A            4 DSSEMSTICDKTLNPSFCLKFL--NTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGG-VDPRSKLAYRSCVDEYE   80 (153)
T ss_dssp             -CCSTTTGGGGSSCHHHHHHHH--HHTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHhCCCCChhHHHHHh--CcCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHH
Confidence            3567899999999999999999  56566789999999999999999999999999988764 58999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 042008          126 DCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINR  205 (208)
Q Consensus       126 ~a~~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~~  205 (208)
                      +++++|++++.+++.+        .++|+++|||+|++|++||+|||.+.+   +++++|..++.++.+|++|+|+|++.
T Consensus        81 ~a~~~L~~a~~~l~~~--------~~~d~~t~lSaAlt~~~tC~dgf~~~~---~~~~~l~~~~~~~~~l~s~aLai~~~  149 (153)
T 1x91_A           81 SAIGNLEEAFEHLASG--------DGMGMNMKVSAALDGADTCLDDVKRLR---SVDSSVVNNSKTIKNLCGIALVISNM  149 (153)
T ss_dssp             HHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc--------CHHHHHHHHHHHHccHhHHHHHhccCC---CCcCHHHHHhHHHHHHHHHHHHHHHH
Confidence            9999999999999863        388999999999999999999998764   46788999999999999999999998


Q ss_pred             hc
Q 042008          206 LS  207 (208)
Q Consensus       206 ls  207 (208)
                      +.
T Consensus       150 l~  151 (153)
T 1x91_A          150 LP  151 (153)
T ss_dssp             SC
T ss_pred             cc
Confidence            75

>2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B*

Probab=100.00  E-value=4.4e-33  Score=215.50  Aligned_cols=146  Identities=17%  Similarity=0.245  Sum_probs=131.7

Q ss_pred             hHHHHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHHH
Q 042008           46 YKNFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEID  125 (208)
Q Consensus        46 ~~~~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely~  125 (208)
                      ..+.|+.+|++|+||++|+++|.++|++...|+++|+++++++++.++..+..++.++.+.. .+++.+.+++||.++|+
T Consensus         3 ~~~~I~~~C~~T~~~~~C~~sL~~~~~s~~ad~~~la~~ai~~~~~~a~~~~~~i~~l~~~~-~~~~~~~al~dC~e~y~   81 (150)
T 2cj4_A            3 MNNLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSN-PPAAWKGPLKNCAFSYK   81 (150)
T ss_dssp             -CHHHHHHHHTSSCHHHHHHHHHTSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CCGGGHHHHHHHHHHHH
T ss_pred             chHHHHHHHcCCCCccHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHH
Confidence            46799999999999999999999999887889999999999999999999999999987654 46888999999999999


Q ss_pred             HHH-HHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 042008          126 DCV-DELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALIN  204 (208)
Q Consensus       126 ~a~-~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~  204 (208)
                      +++ ++|++++.+++.+        .++++++|||+|++|++||+|||.+.      +++|..++.++.+|++|+|+|++
T Consensus        82 ~a~~~~L~~a~~~l~~~--------~~~~~~t~lsaAlt~~~tC~dgf~~~------~~pl~~~~~~~~~l~s~aLaii~  147 (150)
T 2cj4_A           82 VILTASLPEAIEALTKG--------DPKFAEDGMVGSSGDAQECEEYFKGS------KSPFSALNIAVHELSDVGRAIVR  147 (150)
T ss_dssp             HHHHTHHHHHHHHHHHS--------CHHHHHHHHHHHHHHHHHHHHTTTTS------CCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHHHHHHHhhCCC------CCccHHHHHHHHHHHHHHHHHHH
Confidence            999 7999999999763        37899999999999999999999842      33578889999999999999998


Q ss_pred             hh
Q 042008          205 RL  206 (208)
Q Consensus       205 ~l  206 (208)
                      .+
T Consensus       148 ~l  149 (150)
T 2cj4_A          148 NL  149 (150)
T ss_dssp             TT
T ss_pred             hh
Confidence            75

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	208
d1x91a_	149	a.29.6.1 (A:) Pectin methylesterase inhibitor 1, P	3e-28
d2cj4a1	147	a.29.6.1 (A:4-150) Invertase inhibitor {Common tob	4e-27

>d1x91a_ a.29.6.1 (A:) Pectin methylesterase inhibitor 1, PMEI1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 149

class: All alpha proteins
fold: Bromodomain-like
superfamily: Plant invertase/pectin methylesterase inhibitor
family: Plant invertase/pectin methylesterase inhibitor
domain: Pectin methylesterase inhibitor 1, PMEI1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  101 bits (253), Expect = 3e-28
 Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 14/161 (8%)

Query: 48  NFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKG 107
           + + T C+ TL P+ C K+L++  ++   +   L  T L      A +T   + S+    
Sbjct: 2   SEMSTICDKTLNPSFCLKFLNTKFAS--ANLQALAKTTLDSTQARATQTLKKLQSIIDG- 58

Query: 108 GLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDT 167
           G+ P  K     C +E +  +  L +A   L +             +   VSAA+   DT
Sbjct: 59  GVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGD--------GMGMNMKVSAALDGADT 110

Query: 168 CMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLSN 208
           C+D+ +       V + +  +   ++ +   +L + N L  
Sbjct: 111 CLDDVKRLRS---VDSSVVNNSKTIKNLCGIALVISNMLPR 148

>d2cj4a1 a.29.6.1 (A:4-150) Invertase inhibitor {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 147

class: All alpha proteins
fold: Bromodomain-like
superfamily: Plant invertase/pectin methylesterase inhibitor
family: Plant invertase/pectin methylesterase inhibitor
domain: Invertase inhibitor
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

 Score = 98.6 bits (245), Expect = 4e-27
 Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 14/159 (8%)

Query: 48  NFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKG 107
           N ++T+C +T    LC K L S   +   D   L    +      AN+ +  ++ +    
Sbjct: 2   NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSN 61

Query: 108 GLRPAEKAVIEDCNEEIDDCVDELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDT 167
               A K  +++C       +      +       +AL K D     +  +  +  D   
Sbjct: 62  P-PAAWKGPLKNCAFSYKVILTASLPEA------IEALTKGD-PKFAEDGMVGSSGDAQE 113

Query: 168 CMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRL 206
           C + F+        K+      + + +++    A++  L
Sbjct: 114 CEEYFKG------SKSPFSALNIAVHELSDVGRAIVRNL 146

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	208
d2cj4a1	147	Invertase inhibitor {Common tobacco (Nicotiana tab	99.98
d1x91a_	149	Pectin methylesterase inhibitor 1, PMEI1 {Thale cr	99.97

>d2cj4a1 a.29.6.1 (A:4-150) Invertase inhibitor {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: All alpha proteins
fold: Bromodomain-like
superfamily: Plant invertase/pectin methylesterase inhibitor
family: Plant invertase/pectin methylesterase inhibitor
domain: Invertase inhibitor
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.98  E-value=3.5e-32  Score=208.06  Aligned_cols=144  Identities=17%  Similarity=0.247  Sum_probs=131.4

Q ss_pred             HHHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHHHHH
Q 042008           48 NFIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDC  127 (208)
Q Consensus        48 ~~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely~~a  127 (208)
                      ++|+.+|++|+||++|+++|.++|++..+|+++|+.+++++++.++..+..++.++.+. +.++..+.+|++|.++|+++
T Consensus         2 ~lI~~~C~~T~~~~~C~~sL~~~p~s~~ad~~~la~~av~~a~~~a~~~~~~i~~l~~~-~~~~~~~~al~~C~e~y~~a   80 (147)
T d2cj4a1           2 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHS-NPPAAWKGPLKNCAFSYKVI   80 (147)
T ss_dssp             HHHHHHHHTSSCHHHHHHHHHTSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-CCCGGGHHHHHHHHHHHHHH
T ss_pred             hHHHHhhcCCCCcHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHH
Confidence            68999999999999999999999998888999999999999999999999999998764 46888999999999999999


Q ss_pred             HH-HHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042008          128 VD-ELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRL  206 (208)
Q Consensus       128 ~~-~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~~l  206 (208)
                      ++ .|+.+...+..+        +++++++|||+|+++++||+|||++.      +++|...+.++.+|++|+|+|++.|
T Consensus        81 v~~~l~~a~~~l~~~--------~~~~~~~~lsaa~~~~~tC~d~f~~~------~spl~~~~~~~~~l~~ial~i~~~L  146 (147)
T d2cj4a1          81 LTASLPEAIEALTKG--------DPKFAEDGMVGSSGDAQECEEYFKGS------KSPFSALNIAVHELSDVGRAIVRNL  146 (147)
T ss_dssp             HHTHHHHHHHHHHHS--------CHHHHHHHHHHHHHHHHHHHHTTTTS------CCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhcC--------CHHHHHHHHHHHHhHHHHhhHHhCCC------CCcHHHHHHHHHHHHHHHHHHHHhh
Confidence            97 599999998763        48899999999999999999999864      3457888999999999999999876

>d1x91a_ a.29.6.1 (A:) Pectin methylesterase inhibitor 1, PMEI1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: Bromodomain-like
superfamily: Plant invertase/pectin methylesterase inhibitor
family: Plant invertase/pectin methylesterase inhibitor
domain: Pectin methylesterase inhibitor 1, PMEI1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=1.3e-31  Score=205.01  Aligned_cols=145  Identities=24%  Similarity=0.413  Sum_probs=132.4

Q ss_pred             HHHcccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhHHHHHHHH
Q 042008           49 FIKTSCNSTLYPALCYKYLSSHASTIKTDSVKLCNTALTVNLKAANKTSALVTSMAKKGGLRPAEKAVIEDCNEEIDDCV  128 (208)
Q Consensus        49 ~I~~~C~~T~~p~lC~~sL~~~~~s~~~~~~~l~~~al~~a~~~a~~a~~~~~~l~~~~~~~~~~~~al~dC~ely~~a~  128 (208)
                      .|+.+|++|+||++|+.+|.++|.+  .|+.+|+.+++++++.++..+..++.++... ..++..+.+|++|.++|++++
T Consensus         3 ~i~~~C~~T~~~~~C~~~L~~~~~~--~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~-~~~~~~~~al~~C~~~y~~a~   79 (149)
T d1x91a_           3 EMSTICDKTLNPSFCLKFLNTKFAS--ANLQALAKTTLDSTQARATQTLKKLQSIIDG-GVDPRSKLAYRSCVDEYESAI   79 (149)
T ss_dssp             STTTGGGGSSCHHHHHHHHHHTTCC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhCCCCCcHHHHHHHCcCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHH
Confidence            4788999999999999999987654  7999999999999999999999999998875 478999999999999999999


Q ss_pred             HHHHHHHHHhhhhhhccchhhhHhHHHHHHHHhhcchhHhHHhhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 042008          129 DELRKASNVLDNLRDALNKEDQMADIKTWVSAAMTDEDTCMDEFEENNVRESVKNKIKKSIVDLRKITSNSLALINRLS  207 (208)
Q Consensus       129 ~~L~~a~~~l~~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~L~snaLAiv~~ls  207 (208)
                      ++|++++.+|+.+        +++++++|||+|+++++||+|||.+.+   +++++|.+++.++.+|++|+|+|++.|.
T Consensus        80 ~~L~~a~~~l~~~--------~~~~~~~~lsaa~~~~~tC~d~f~~~~---~~~s~l~~~~~~~~~l~~ialai~~~L~  147 (149)
T d1x91a_          80 GNLEEAFEHLASG--------DGMGMNMKVSAALDGADTCLDDVKRLR---SVDSSVVNNSKTIKNLCGIALVISNMLP  147 (149)
T ss_dssp             HHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHcC--------CHHHHHHHHHHHHHhHhHhHHHHhhcC---CCCcHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999874        378999999999999999999998764   4577899999999999999999998874