Citrus Sinensis ID: 042029


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
MQNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVISRSHKAFVSSLMHSSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVAEFWRQEDAGVFSSKIEKEEVLKLVEETELFKHLNRWLASEISSCKSLISFGFNENTVFHMKLSLLDQTCRKETNLTLAKADGAKPMTLVSGKIRTNGIDQGIDMLLVPSSLTSQSRNLLHPSTAGILTLLVLALRQRTWAGIKQENLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFLMIDLRGPSLSG
cccccccccccccccccccEEEEEEccccccccEEEcHHHHHHHHHccccccccEEEEEEEEcccccccEEEEEEcccccHHHHHHHHHHcccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccHHHHHHHHHHHHccccccHHHHHcccHHHHHcccccccccccccccccccccccccccEEEEEEEEEEcccccccEEEEcccccccccccccccccccHHHHHHHHcccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccc
cccccccccccccccccccEEEEEEcccccccccEccHHHHHHHHcccccccccccEEEEEEcccccccEEEEEEcccccHHHHHHHHHHHcHHHHcccccccHHHHHHHHHHHccHHHHHHHHHHHHHccHccccccccHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccccccccHHHHHHHHcccccccccEEEEEEEcccccEEEEEEEEEccccccccEEEEcccccccccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHEEEEEcccccccc
mqngnghyspiggyhagRDMVLILDVArfkypphwmplTLLWEAMDTidestgqhrgfMVISRSHKAFVSSLMHSSGHEDLKKVAKYLIEdvpprmklkdikgVENILSVLFKSAPVDLKDFIKCVAEFWRqedagvfsskiEKEEVLKLVEETELFKHLNRWLASEISSCKSLisfgfnentVFHMKLSLLDQTCRKETNLtlakadgakpmtlvsgkirtngidqgidmllvpssltsqsrnllhpstAGILTLLVLALRQRTWAGIKQENLLAQFNHltsidnlptplQLEVLHLRRQLHFLMIdlrgpslsg
mqngnghyspiggyhAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVISRSHKAFVSSLMHSSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVAEFWRQedagvfsskieKEEVLKLVEETELFKHLNRWLASEISSCKSLISFGFNENTVFHMKLSLLDQTCRKETNLtlakadgakpmtlVSGKIRTNGIDQGIDMLLVPSSLTSQSRNLLHPSTAGILTLLVLALRQRTWAGIKQENLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFLMidlrgpslsg
MQNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVISRSHKAFVSSLMHSSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVAEFWRQEDAGVFSSKIekeevlklveetelFKHLNRWLASEISSCKSLISFGFNENTVFHMKLSLLDQTCRKETNLTLAKADGAKPMTLVSGKIRTNGIDQGIDMLLVPSSLTSQSRNLLHPSTAGILTLLVLALRQRTWAGIKQENLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFLMIDLRGPSLSG
********SPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVISRSHKAFVSSLMH***HEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVAEFWRQEDAGVFSSKIEKEEVLKLVEETELFKHLNRWLASEISSCKSLISFGFNENTVFHMKLSLLDQTCRKETNLTLAKADGAKPMTLVSGKIRTNGIDQGIDMLLVPSSLT**SRNLLHPSTAGILTLLVLALRQRTWAGIKQENLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFLMIDL*******
***GNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVISRSHKAFVSSLMHSSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVAEFW***************EVLKLVEETELFKHLNRWLASEISSCKSLISFGFNENTVFHMKLSLLDQTCRKETNLTLAKADGAKPMTLVSGKIRTNGIDQGIDMLLVPS*********LHPSTAGILTLLVLALRQRTWAGIKQENLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFLMID*RGP****
MQNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVISRSHKAFVSSLMHSSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVAEFWRQEDAGVFSSKIEKEEVLKLVEETELFKHLNRWLASEISSCKSLISFGFNENTVFHMKLSLLDQTCRKETNLTLAKADGAKPMTLVSGKIRTNGIDQGIDMLLVPSSLTSQSRNLLHPSTAGILTLLVLALRQRTWAGIKQENLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFLMIDLRGPSLSG
*****GHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVISRSHKAFVSSLMHSSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVAEFWRQEDAGVFSSKIEKEEVLKLVEETELFKHLNRWLASEISSCKSLISFGFNENTVFHMKLSLLDQTCRKETNLTLAKADGAKPMTLVSGKIRTNGIDQGIDMLLVPSSLTSQSRNLLHPSTAGILTLLVLALRQRTWAGIKQENLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFLMIDLR******
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MQNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVISRSHKAFVSSLMHSSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVAEFWRQEDAGVFSSKIEKEEVLKLVEETELFKHLNRWLASEISSCKSLISFGFNENTVFHMKLSLLDQTCRKETNLTLAKADGAKPMTLVSGKIRTNGIDQGIDMLLVPSSLTSQSRNLLHPSTAGILTLLVLALRQRTWAGIKQENLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFLMIDLRGPSLSG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query316 2.2.26 [Sep-21-2011]
Q2TSC7501 Glutathione gamma-glutamy N/A no 0.946 0.596 0.435 7e-68
Q9SWW5500 Glutathione gamma-glutamy N/A no 0.939 0.594 0.416 3e-59
Q2QKL5479 Glutathione gamma-glutamy N/A no 0.930 0.613 0.410 4e-58
Q9ZWB7452 Glutathione gamma-glutamy yes no 0.870 0.608 0.416 1e-56
Q2TE74482 Glutathione gamma-glutamy N/A no 0.962 0.630 0.395 4e-55
Q9S7Z3485 Glutathione gamma-glutamy no no 0.895 0.583 0.415 2e-54
Q10075414 Glutathione gamma-glutamy yes no 0.202 0.154 0.484 1e-14
>sp|Q2TSC7|PCS1_LOTJA Glutathione gamma-glutamylcysteinyltransferase 1 OS=Lotus japonicus GN=PCS1 PE=2 SV=1 Back     alignment and function desciption
 Score =  257 bits (657), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 145/333 (43%), Positives = 202/333 (60%), Gaps = 34/333 (10%)

Query: 2   QNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVI 61
           Q G GH+SPIGGYHAG+DM LILDVARFKYPPHW+PLT LWE M+ +DESTG+ RGFM+I
Sbjct: 157 QTGTGHFSPIGGYHAGKDMALILDVARFKYPPHWIPLTHLWEGMNYVDESTGKTRGFMLI 216

Query: 62  SRSHKAFVSSLMHSSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKD 121
           SR H+        S  HE    +AK+LI+D+P  +  +D+K +  +LSV+  S P + ++
Sbjct: 217 SRPHREPGMLYTLSCKHESWNSIAKFLIDDIPFLLTSEDVKDICKVLSVIVTSLPSNFEE 276

Query: 122 FIKCVAEFWRQEDAGVFSSKIE-------KEEVLKLVEETELFKHLNRWLASEISSCKSL 174
           FIK VAE  R ED G  S  +E       KEE+LK V+ T LFKH+  +L+    SC   
Sbjct: 277 FIKWVAEIRRGED-GSPSLSVEEKARLSVKEEILKQVQRTGLFKHVASFLS---HSCSGH 332

Query: 175 ISFGFNENT--------------VFHMKLSLLDQTCRKETNLTLAKADGAKPMTLVSGKI 220
                + +T              +   K+S   + C +ET +   KA+  KP+ +V G +
Sbjct: 333 TPTSGDRDTFPVIAASVCCQGAEILGGKISSSAEYCCRETCMKCWKAEDDKPIRMVCGTV 392

Query: 221 RTNGIDQGIDMLLVPSS-------LTSQSRNLL-HPSTAGILTLLVLALRQRTWAGIKQE 272
                +QG+D +L+PSS        +S ++++  HP++  +LT+L+L+L   TWAGI  E
Sbjct: 393 VNGNTEQGVD-VLIPSSCGKLSCTCSSTTKSIRKHPASTDVLTVLLLSLPTSTWAGIADE 451

Query: 273 NLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFL 305
            LL++ + L SI+NLP  LQ EVLHLRRQLH L
Sbjct: 452 KLLSEIHDLVSIENLPALLQEEVLHLRRQLHIL 484




Involved in the synthesis of phytochelatins (PC) and homophytochelatins (hPC), the heavy-metal-binding peptides of plants.
Lotus japonicus (taxid: 34305)
EC: 2EC: .EC: 3EC: .EC: 2EC: .EC: 1EC: 5
>sp|Q9SWW5|PCS1_WHEAT Glutathione gamma-glutamylcysteinyltransferase 1 OS=Triticum aestivum GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q2QKL5|PCS3_LOTJA Glutathione gamma-glutamylcysteinyltransferase 3 OS=Lotus japonicus GN=PCS3 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZWB7|PCS2_ARATH Glutathione gamma-glutamylcysteinyltransferase 2 OS=Arabidopsis thaliana GN=PCS2 PE=2 SV=1 Back     alignment and function description
>sp|Q2TE74|PCS2_LOTJA Glutathione gamma-glutamylcysteinyltransferase 2 OS=Lotus japonicus GN=PCS2 PE=2 SV=2 Back     alignment and function description
>sp|Q9S7Z3|PCS1_ARATH Glutathione gamma-glutamylcysteinyltransferase 1 OS=Arabidopsis thaliana GN=PCS1 PE=1 SV=1 Back     alignment and function description
>sp|Q10075|PCS_SCHPO Glutathione gamma-glutamylcysteinyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.10 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query316
224129604 496 predicted protein [Populus trichocarpa] 0.965 0.614 0.519 1e-85
321274072360 phytochelatin synthase, partial [Populus 0.962 0.844 0.508 7e-84
254935134 501 phytochelatin synthase isoform 3 [Sesban 0.952 0.600 0.450 2e-68
297744174 466 unnamed protein product [Vitis vinifera] 0.946 0.641 0.460 4e-68
225438071 481 PREDICTED: glutathione gamma-glutamylcys 0.946 0.621 0.460 4e-68
255577926 502 conserved hypothetical protein [Ricinus 0.955 0.601 0.477 2e-67
67944509 465 phytochelatin synthase [Sesbania rostrat 0.952 0.647 0.444 2e-66
449445618 504 PREDICTED: glutathione gamma-glutamylcys 0.952 0.597 0.453 3e-66
388518807 503 unknown [Lotus japonicus] 0.946 0.594 0.435 4e-66
122208907 501 RecName: Full=Glutathione gamma-glutamyl 0.946 0.596 0.435 5e-66
>gi|224129604|ref|XP_002320627.1| predicted protein [Populus trichocarpa] gi|222861400|gb|EEE98942.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 175/337 (51%), Positives = 224/337 (66%), Gaps = 32/337 (9%)

Query: 2   QNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVI 61
           Q G+GH+SPIGGYHAG+DMVLILDVARFKYPPHW+PL LLWEAM+TID++TG HRGFM++
Sbjct: 157 QTGSGHFSPIGGYHAGKDMVLILDVARFKYPPHWVPLELLWEAMNTIDKATGHHRGFMIL 216

Query: 62  SRSHKAFVSSLMH--SSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDL 119
           S+  KA  SS+++  S  H+    VA YL  DVP  +K +D+K VE +LSV+FKS P DL
Sbjct: 217 SKLDKA--SSILYTLSCRHKGWSSVANYLSADVPHLLKSEDVKDVEEVLSVVFKSPPADL 274

Query: 120 KDFIKCVAEFWRQEDAGVFSSKIE------KEEVLKLVEETELFKHLNRWLASEISSCKS 173
           ++FIK VAE  RQ+D G+  S+ E      KEEVLK V+ TELFK++ RWL SEIS+CK 
Sbjct: 275 REFIKWVAEVRRQDDGGIILSEEEKGRLSIKEEVLKQVQGTELFKYVTRWLISEISTCKG 334

Query: 174 LISFGFNE------------NTVFHMKLSLLDQTCRKETNLTLAKADGAKPMTLVSGKIR 221
            IS   NE              +     S LD    K+  +   K+DG KP+T+VSG + 
Sbjct: 335 AISGHNNELPEIAANVCCQGAKLLTENFSSLDCMVFKKAGVKFWKSDGEKPVTVVSGTVF 394

Query: 222 TNGIDQGIDMLLVPSSLTSQSR---------NLLHPSTAGILTLLVLALRQRTWAGIKQE 272
           T+G +QG+DM LVP S T+ S          +  HPS   +L++L+ +L Q TW+ IK E
Sbjct: 395 TDGSEQGVDM-LVPLSQTAASSLCDLDQNGCHGFHPSAGDVLSVLIFSLHQNTWSNIKDE 453

Query: 273 NLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFLMIDL 309
            L A+ N L SIDN+P  LQ EVLHLRRQLHFL ID+
Sbjct: 454 KLQAEINSLVSIDNVPPLLQEEVLHLRRQLHFLTIDI 490




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|321274072|gb|ADW80944.1| phytochelatin synthase, partial [Populus x canadensis] Back     alignment and taxonomy information
>gi|254935134|gb|ACT87974.1| phytochelatin synthase isoform 3 [Sesbania rostrata] gi|254935139|gb|ACT87977.1| phytochelatin synthase isoform 3 [Sesbania rostrata] Back     alignment and taxonomy information
>gi|297744174|emb|CBI37144.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225438071|ref|XP_002272237.1| PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255577926|ref|XP_002529835.1| conserved hypothetical protein [Ricinus communis] gi|223530663|gb|EEF32536.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|67944509|gb|AAY83876.1| phytochelatin synthase [Sesbania rostrata] Back     alignment and taxonomy information
>gi|449445618|ref|XP_004140569.1| PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1-like [Cucumis sativus] gi|449487365|ref|XP_004157590.1| PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|388518807|gb|AFK47465.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|122208907|sp|Q2TSC7.1|PCS1_LOTJA RecName: Full=Glutathione gamma-glutamylcysteinyltransferase 1; AltName: Full=LjPCS1-8R; AltName: Full=Phytochelatin synthase 1 gi|33286859|gb|AAQ01752.1| phytochelatin synthase [Lotus japonicus] gi|50659121|gb|AAT80342.1| phytochelatin synthase PCS1-8R [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query316
TAIR|locus:2172497485 CAD1 "CADMIUM SENSITIVE 1" [Ar 0.946 0.616 0.413 5.1e-51
TAIR|locus:2024172452 PCS2 "phytochelatin synthase 2 0.677 0.473 0.406 5.3e-49
DICTYBASE|DDB_G0291187626 DDB_G0291187 "glutathione gamm 0.386 0.194 0.370 1.2e-20
POMBASE|SPAC3H1.10414 pcs2 "phytochelatin synthetase 0.357 0.272 0.336 1.5e-12
WB|WBGene00003960426 pcs-1 [Caenorhabditis elegans 0.183 0.136 0.517 1.7e-10
TAIR|locus:2172497 CAD1 "CADMIUM SENSITIVE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 131/317 (41%), Positives = 185/317 (58%)

Query:     2 QNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVI 61
             Q G GH+SPIGGY+A RDM LILDVARFKYPPHW+PL LLWEAMD+ID+STG+ RGFM+I
Sbjct:   157 QTGTGHFSPIGGYNAERDMALILDVARFKYPPHWVPLKLLWEAMDSIDQSTGKRRGFMLI 216

Query:    62 SRSHKAFVSSLMHSSGHEDLK--KVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDL 119
             SR H+     L+++   +D    ++AKYL EDVP  +  + +  VE I+SV+FKS P + 
Sbjct:   217 SRPHRE--PGLLYTLSCKDESWIEIAKYLKEDVPRLVSSQHVDSVEKIISVVFKSLPSNF 274

Query:   120 KDFIKCVAEFWRQEDAGVF-----SSKIXXXXXXXXXXXXXX-FKHLNRWLASEISSCKS 173
               FI+ VAE    ED+         S++               FKH+N++L S +    S
Sbjct:   275 NQFIRWVAEIRITEDSNQNLSAEEKSRLKLKQLVLKEVHETELFKHINKFL-STVGYEDS 333

Query:   174 LISFGFNENTVFHMKL---SLLDQTCRKETNLTLAKADGAKPMTLVSGKIRTNGIDQGID 230
             L ++   +      ++   S   + C +ET +   K       T+V+G +  +G +Q +D
Sbjct:   334 L-TYAAAKACCQGAEILSGSPSKEFCCRETCVKCIKGPDDSEGTVVTGVVVRDGNEQKVD 392

Query:   231 MLLVPSSLTSQS--RNLLHPSTAGILTLLVLALRQRTWAGIKQENLLAQFNHLTSIDNLP 288
              LLVPS+ T         +P+   + T L+LAL  +TW+GIK + L+ +   L S+ +LP
Sbjct:   393 -LLVPSTQTECECGPEATYPAGNDVFTALLLALPPQTWSGIKDQALMHEMKQLISMASLP 451

Query:   289 TPLQLEVLHLRRQLHFL 305
             T LQ EVLHLRRQL  L
Sbjct:   452 TLLQEEVLHLRRQLQLL 468




GO:0009507 "chloroplast" evidence=ISM
GO:0010038 "response to metal ion" evidence=IEA
GO:0016756 "glutathione gamma-glutamylcysteinyltransferase activity" evidence=IEA;IDA;IMP
GO:0046872 "metal ion binding" evidence=IEA
GO:0046938 "phytochelatin biosynthetic process" evidence=IEA;ISS;IMP
GO:0046685 "response to arsenic-containing substance" evidence=IMP;IDA
GO:0046686 "response to cadmium ion" evidence=IMP;IDA
GO:0042344 "indole glucosinolate catabolic process" evidence=IMP
GO:0042742 "defense response to bacterium" evidence=RCA;IMP
GO:0052544 "defense response by callose deposition in cell wall" evidence=IMP
GO:0005829 "cytosol" evidence=IDA
GO:0015446 "arsenite-transmembrane transporting ATPase activity" evidence=IDA
GO:0015700 "arsenite transport" evidence=IDA
GO:0071992 "phytochelatin transmembrane transporter activity" evidence=IDA
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009814 "defense response, incompatible interaction" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0019684 "photosynthesis, light reaction" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
GO:0005507 "copper ion binding" evidence=IDA
GO:0046870 "cadmium ion binding" evidence=IDA
TAIR|locus:2024172 PCS2 "phytochelatin synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0291187 DDB_G0291187 "glutathione gamma-glutamylcysteinyltransferase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
POMBASE|SPAC3H1.10 pcs2 "phytochelatin synthetase" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
WB|WBGene00003960 pcs-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.2LOW CONFIDENCE prediction!
3rd Layer2.3.2.15LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
pfam09328264 pfam09328, Phytochelatin_C, Domain of unknown func 2e-67
pfam05023208 pfam05023, Phytochelatin, Phytochelatin synthase 3e-35
>gnl|CDD|220182 pfam09328, Phytochelatin_C, Domain of unknown function (DUF1984) Back     alignment and domain information
 Score =  211 bits (538), Expect = 2e-67
 Identities = 113/255 (44%), Positives = 151/255 (59%), Gaps = 28/255 (10%)

Query: 75  SSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVAEFWRQED 134
           S  HE  + +AKYL+EDVP  +K +++K V+ +LSV+FKS P +  DFIK VAE  RQE+
Sbjct: 11  SCKHESWRSMAKYLMEDVPRLLKSENLKDVQEVLSVVFKSLPANFGDFIKWVAEVRRQEE 70

Query: 135 AGVFSSKIE------KEEVLKLVEETELFKHLNRWLASEISSCKSLISFGFNEN------ 182
                SK E      KEEVL+ V ETELFKH+ +WL+SE S C +       ++      
Sbjct: 71  GNSSLSKEEKERLALKEEVLQQVRETELFKHVTKWLSSEKSCCCNCSKSSDEDSLPEIAA 130

Query: 183 -------TVFHMKLSLLDQTCRKETNLTLAKADGAKPMTLVSGKIRTNGIDQGIDMLLVP 235
                   +   KL   +  C KET +   KA+G  P T+VSG + ++G +QG+DML VP
Sbjct: 131 SVCCQGAAILTGKLCSSNGFCCKETCVKCVKANGDGPTTVVSGTVVSDGSEQGVDML-VP 189

Query: 236 SSLT--------SQSRNLLHPSTAGILTLLVLALRQRTWAGIKQENLLAQFNHLTSIDNL 287
            S T        S S   +HPS+  +LT+L+LAL   TW+GIK E+LLA+   L S +NL
Sbjct: 190 KSPTKTSCCNSGSSSEVAMHPSSNDVLTVLLLALPPSTWSGIKDESLLAEIQRLVSTENL 249

Query: 288 PTPLQLEVLHLRRQL 302
           P  LQ EVLHLRRQL
Sbjct: 250 PDLLQEEVLHLRRQL 264


Members of this family of functionally uncharacterized domains are found at the C-terminus of plant phytochelatin synthases. Length = 264

>gnl|CDD|218387 pfam05023, Phytochelatin, Phytochelatin synthase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 316
PF09328264 Phytochelatin_C: Domain of unknown function (DUF19 100.0
KOG0632388 consensus Phytochelatin synthase [Inorganic ion tr 100.0
PF05023212 Phytochelatin: Phytochelatin synthase; InterPro: I 99.97
PF14399317 Transpep_BrtH: NlpC/p60-like transpeptidase 86.47
>PF09328 Phytochelatin_C: Domain of unknown function (DUF1984); InterPro: IPR015407 This entry represents the C-terminal region of plant phytochelatin synthases (also known as glutathione gamma-glutamylcysteinyltransferase; 2 Back     alignment and domain information
Probab=100.00  E-value=4.2e-104  Score=730.29  Aligned_cols=237  Identities=49%  Similarity=0.706  Sum_probs=232.7

Q ss_pred             CCCceeEEEeeeCCcChHHHHHHHHhcCccccccCCCCCHHHHHHHHHhcCCcchhhhheeeeEEeeccccCCCCCHHH-
Q 042029           65 HKAFVSSLMHSSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVAEFWRQEDAGVFSSKIE-  143 (316)
Q Consensus        65 ~~~p~~l~~~s~~~~~W~~~ak~l~~~vp~ll~~~~~~~v~~vls~v~~slP~~~~~fikwv~Evrr~e~~~~~ls~ee-  143 (316)
                      +++|++|||+||+||+|.+|||||+||||.||++++++||++||++||+|||+||++||||||||||+|||+++||+|| 
T Consensus         1 ~r~P~lLYTlSCkhEsW~s~AKyL~eDvP~LLkse~v~~v~~vls~vf~SlPsn~~~FIKWVaEVRR~Edg~~~LS~EEk   80 (264)
T PF09328_consen    1 HRAPSLLYTLSCKHESWISMAKYLMEDVPRLLKSEDVKDVEEVLSVVFKSLPSNFGEFIKWVAEVRRQEDGGSSLSKEEK   80 (264)
T ss_pred             CCCCceeEEeecCcCcHHHHHHHHHHHHHHHhhhcccCcHHHHHHHHHhcCchhHHHHhhhheeEEecccCCCCCCHHHH
Confidence            5799999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             -----HHHHHHHHhcchhHHHHHHHhhcccccccccccCCCCcc-------------ceeeccccccccccccccccccc
Q 042029          144 -----KEEVLKLVEETELFKHLNRWLASEISSCKSLISFGFNEN-------------TVFHMKLSLLDQTCRKETNLTLA  205 (316)
Q Consensus       144 -----k~~vlqqv~~T~Lfk~V~~~~~s~~s~c~~~~~~~~~d~-------------~il~g~~~~~~~~cc~et~vkc~  205 (316)
                           |++||||||+|+|||||++||++.+|||+++++++++|+             +||+|+++++++|||+|||+||+
T Consensus        81 ~RL~lKe~VL~Qvr~T~LFk~V~~~L~s~~s~c~~~~~~~~~dsL~~iaa~vCCQGA~iL~G~~~s~~~~Cc~etcvkc~  160 (264)
T PF09328_consen   81 ERLALKEEVLQQVRETELFKHVTKWLSSSNSCCCNCSNSGDEDSLPDIAASVCCQGAAILSGNLGSSDGFCCKETCVKCV  160 (264)
T ss_pred             HHHHHHHHHHHHHHhchHHHHHHHHHhccccccccccccCccccHHHHHHHHhhhhHHHHcCCCCCCCCceEccccccee
Confidence                 899999999999999999999999999999999999999             89999999999999999999999


Q ss_pred             ccCCCCCeeEeeceEeeCCcccceeeeeccCcccc--------CCccccCCCchhHHHHHHHhcCcchhcCCCchhHHHH
Q 042029          206 KADGAKPMTLVSGKIRTNGIDQGIDMLLVPSSLTS--------QSRNLLHPSTAGILTLLVLALRQRTWAGIKQENLLAQ  277 (316)
Q Consensus       206 k~~~~~~~tvvsg~vv~~g~eqgvD~L~vP~s~~~--------~~~~~~hPs~~DvlTvLLLaLp~~TWs~Ikde~L~~E  277 (316)
                      |+|||||+|||||+||++|+||||||| ||+|+++        +++++|||+++||||||||||||+||+|||||+|++|
T Consensus       161 k~n~d~~~tvvsGtVv~~g~Eq~VD~L-vP~s~~~~~~c~~~~~~~~~~hPs~~DVLTvLLLALpp~TWs~Ikde~l~~E  239 (264)
T PF09328_consen  161 KANGDGPKTVVSGTVVSGGSEQGVDVL-VPSSQTKTSCCNSGSSNEIGMHPSSNDVLTVLLLALPPSTWSGIKDEKLLAE  239 (264)
T ss_pred             eeCCCCceEEEeeeEEcCCCccceeEE-eccccCCCCccCCCCCCccccCCCcccHHHHHHHhCCccccccCccHHHHHH
Confidence            999999999999999999999999999 9999998        3566999999999999999999999999999999999


Q ss_pred             HHhhhccCCCChhHHHHHHHHHHHH
Q 042029          278 FNHLTSIDNLPTPLQLEVLHLRRQL  302 (316)
Q Consensus       278 ~~~LvSt~~LP~~Lq~EVlhLrrQl  302 (316)
                      |++||||||||++||+||+||||||
T Consensus       240 i~~LvSte~LP~lLQeEVlHLrrQL  264 (264)
T PF09328_consen  240 IQSLVSTENLPDLLQEEVLHLRRQL  264 (264)
T ss_pred             HHHHhhhhhCcHHHHHHHHHHHhcC
Confidence            9999999999999999999999996



3.2.15 from EC), which is involved in the synthesis of phytochelatins (PC) and homophytochelatins (hPC), the heavy-metal-binding peptides of plants. This enzyme is required for detoxification of heavy metals such as cadmium and arsenate. The N-terminal region of phytochelatin synthase contains the active site, as well as four highly conserved cysteine residues that appear to play an important role in heavy-metal-induced phytochelatin catalysis. The C-terminal region is rich in cysteines, and may act as a metal sensor, whereby the Cys residues bind cadmium ions to bring them into closer proximity and transferring them to the activation site in the N-terminal catalytic domain []. The C-terminal region displays homology to the functional domains of metallothionein and metallochaperone.; GO: 0016756 glutathione gamma-glutamylcysteinyltransferase activity, 0046872 metal ion binding, 0010038 response to metal ion, 0046938 phytochelatin biosynthetic process

>KOG0632 consensus Phytochelatin synthase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF05023 Phytochelatin: Phytochelatin synthase; InterPro: IPR007719 This entry represents plant phytochelatin synthases (also known as glutathione gamma-glutamylcysteinyltransferase; 2 Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
2btw_B254 Crystal Structure Of Alr0975 Length = 254 4e-12
2btw_A254 Crystal Structure Of Alr0975 Length = 254 4e-12
>pdb|2BTW|B Chain B, Crystal Structure Of Alr0975 Length = 254 Back     alignment and structure

Iteration: 1

Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 41/64 (64%) Query: 2 QNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVI 61 Q GH SP+ Y+ D LI DV+R+KYPP W+ T LW+A +T+D + + RGF+ + Sbjct: 189 QERGGHISPLAAYNEQTDRFLIXDVSRYKYPPVWVKTTDLWKAXNTVDSVSQKTRGFVFV 248 Query: 62 SRSH 65 S++ Sbjct: 249 SKTQ 252
>pdb|2BTW|A Chain A, Crystal Structure Of Alr0975 Length = 254 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
2bu3_A254 ALR0975 protein; phytochelatin synthase, PCS, acyl 1e-29
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>2bu3_A ALR0975 protein; phytochelatin synthase, PCS, acyl-enzyme intermedia nostoc, glutathione metabolism, cysteine protease, transfer; HET: 3GC; 1.4A {Anabaena SP} SCOP: d.3.1.14 PDB: 2btw_A* 2btw_B Length = 254 Back     alignment and structure
 Score =  112 bits (281), Expect = 1e-29
 Identities = 28/65 (43%), Positives = 43/65 (66%)

Query: 2   QNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVI 61
           Q   GH SP+  Y+   D  LI+DV+R+KYPP W+  T LW+AM+T+D  + + RGF+ +
Sbjct: 189 QERGGHISPLAAYNEQTDRFLIMDVSRYKYPPVWVKTTDLWKAMNTVDSVSQKTRGFVFV 248

Query: 62  SRSHK 66
           S++  
Sbjct: 249 SKTQD 253


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query316
2bu3_A254 ALR0975 protein; phytochelatin synthase, PCS, acyl 99.97
>2bu3_A ALR0975 protein; phytochelatin synthase, PCS, acyl-enzyme intermedia nostoc, glutathione metabolism, cysteine protease, transfer; HET: 3GC; 1.4A {Anabaena SP} SCOP: d.3.1.14 PDB: 2btw_A* 2btw_B Back     alignment and structure
Probab=99.97  E-value=1.7e-31  Score=245.98  Aligned_cols=66  Identities=42%  Similarity=0.873  Sum_probs=62.5

Q ss_pred             CCCCCccccccccccCCCCeEEEEecCCCCCCceecchHHHHHhhccccCcCCCceeEEEEecCCC
Q 042029            1 MQNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVISRSHK   66 (316)
Q Consensus         1 gQtG~GHFSPIggYh~~~D~vLILDVARfKYpp~WV~~~~L~~AM~~~D~~tg~~RG~~~is~~~~   66 (316)
                      ||+|+||||||||||+++|+||||||||||||||||++++||+||+++|++||++|||++|++.++
T Consensus       188 ~q~G~GHfSPIggY~~~~D~vLIlDVar~kYpp~WV~~~~L~~Am~~~D~~s~~~RG~~li~~~~~  253 (254)
T 2bu3_A          188 GQERGGHISPLAAYNEQTDRFLIMDVSRYKYPPVWVKTTDLWKAMNTVDSVSQKTRGFVFVSKTQD  253 (254)
T ss_dssp             TCSSSEEEEEEEEEETTTTEEEECCSCTTTCCCEEEEHHHHHHHHSSEETTTTEECEEEEEEC---
T ss_pred             CCCCCCceeceeeEcCCCCeEEEEecCccCCCCEeeeHHHHHHHHhcccccCCCcceEEEEecccC
Confidence            799999999999999999999999999999999999999999999999999999999999998764




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 316
d2bu3a1210 d.3.1.14 (A:29-238) Primitive phytochelatin syntha 3e-30
>d2bu3a1 d.3.1.14 (A:29-238) Primitive phytochelatin synthase {Nostoc sp. pcc 7120 [TaxId: 103690]} Length = 210 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Phytochelatin synthase
domain: Primitive phytochelatin synthase
species: Nostoc sp. pcc 7120 [TaxId: 103690]
 Score =  111 bits (280), Expect = 3e-30
 Identities = 28/61 (45%), Positives = 41/61 (67%)

Query: 2   QNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVI 61
           Q   GH SP+  Y+   D  LI+DV+R+KYPP W+  T LW+AM+T+D  + + RGF+ +
Sbjct: 150 QERGGHISPLAAYNEQTDRFLIMDVSRYKYPPVWVKTTDLWKAMNTVDSVSQKTRGFVFV 209

Query: 62  S 62
           S
Sbjct: 210 S 210


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query316
d2bu3a1210 Primitive phytochelatin synthase {Nostoc sp. pcc 7 99.96
>d2bu3a1 d.3.1.14 (A:29-238) Primitive phytochelatin synthase {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Phytochelatin synthase
domain: Primitive phytochelatin synthase
species: Nostoc sp. pcc 7120 [TaxId: 103690]
Probab=99.96  E-value=2.2e-31  Score=236.52  Aligned_cols=62  Identities=45%  Similarity=0.898  Sum_probs=61.2

Q ss_pred             CCCCCccccccccccCCCCeEEEEecCCCCCCceecchHHHHHhhccccCcCCCceeEEEEe
Q 042029            1 MQNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVIS   62 (316)
Q Consensus         1 gQtG~GHFSPIggYh~~~D~vLILDVARfKYpp~WV~~~~L~~AM~~~D~~tg~~RG~~~is   62 (316)
                      ||+|+||||||||||+++|+|||||||||||||||||+++||+||+++|++||++||||+|+
T Consensus       149 ~q~G~GHfSPI~gY~~~~d~vlilDvar~kypp~Wv~~~~L~~am~t~D~~t~~~RG~i~is  210 (210)
T d2bu3a1         149 GQERGGHISPLAAYNEQTDRFLIMDVSRYKYPPVWVKTTDLWKAMNTVDSVSQKTRGFVFVS  210 (210)
T ss_dssp             TCSSSEEEEEEEEEETTTTEEEECCSCTTTCCCEEEEHHHHHHHHSSEETTTTEECEEEEEE
T ss_pred             CcCCCcceeeEEEEcCCCCEEEEEecCcccCCCeEeEHHHHHHHHhccccCCCCcceEEEeC
Confidence            79999999999999999999999999999999999999999999999999999999999996