Citrus Sinensis ID: 042029
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 316 | ||||||
| 224129604 | 496 | predicted protein [Populus trichocarpa] | 0.965 | 0.614 | 0.519 | 1e-85 | |
| 321274072 | 360 | phytochelatin synthase, partial [Populus | 0.962 | 0.844 | 0.508 | 7e-84 | |
| 254935134 | 501 | phytochelatin synthase isoform 3 [Sesban | 0.952 | 0.600 | 0.450 | 2e-68 | |
| 297744174 | 466 | unnamed protein product [Vitis vinifera] | 0.946 | 0.641 | 0.460 | 4e-68 | |
| 225438071 | 481 | PREDICTED: glutathione gamma-glutamylcys | 0.946 | 0.621 | 0.460 | 4e-68 | |
| 255577926 | 502 | conserved hypothetical protein [Ricinus | 0.955 | 0.601 | 0.477 | 2e-67 | |
| 67944509 | 465 | phytochelatin synthase [Sesbania rostrat | 0.952 | 0.647 | 0.444 | 2e-66 | |
| 449445618 | 504 | PREDICTED: glutathione gamma-glutamylcys | 0.952 | 0.597 | 0.453 | 3e-66 | |
| 388518807 | 503 | unknown [Lotus japonicus] | 0.946 | 0.594 | 0.435 | 4e-66 | |
| 122208907 | 501 | RecName: Full=Glutathione gamma-glutamyl | 0.946 | 0.596 | 0.435 | 5e-66 |
| >gi|224129604|ref|XP_002320627.1| predicted protein [Populus trichocarpa] gi|222861400|gb|EEE98942.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/337 (51%), Positives = 224/337 (66%), Gaps = 32/337 (9%)
Query: 2 QNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVI 61
Q G+GH+SPIGGYHAG+DMVLILDVARFKYPPHW+PL LLWEAM+TID++TG HRGFM++
Sbjct: 157 QTGSGHFSPIGGYHAGKDMVLILDVARFKYPPHWVPLELLWEAMNTIDKATGHHRGFMIL 216
Query: 62 SRSHKAFVSSLMH--SSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDL 119
S+ KA SS+++ S H+ VA YL DVP +K +D+K VE +LSV+FKS P DL
Sbjct: 217 SKLDKA--SSILYTLSCRHKGWSSVANYLSADVPHLLKSEDVKDVEEVLSVVFKSPPADL 274
Query: 120 KDFIKCVAEFWRQEDAGVFSSKIE------KEEVLKLVEETELFKHLNRWLASEISSCKS 173
++FIK VAE RQ+D G+ S+ E KEEVLK V+ TELFK++ RWL SEIS+CK
Sbjct: 275 REFIKWVAEVRRQDDGGIILSEEEKGRLSIKEEVLKQVQGTELFKYVTRWLISEISTCKG 334
Query: 174 LISFGFNE------------NTVFHMKLSLLDQTCRKETNLTLAKADGAKPMTLVSGKIR 221
IS NE + S LD K+ + K+DG KP+T+VSG +
Sbjct: 335 AISGHNNELPEIAANVCCQGAKLLTENFSSLDCMVFKKAGVKFWKSDGEKPVTVVSGTVF 394
Query: 222 TNGIDQGIDMLLVPSSLTSQSR---------NLLHPSTAGILTLLVLALRQRTWAGIKQE 272
T+G +QG+DM LVP S T+ S + HPS +L++L+ +L Q TW+ IK E
Sbjct: 395 TDGSEQGVDM-LVPLSQTAASSLCDLDQNGCHGFHPSAGDVLSVLIFSLHQNTWSNIKDE 453
Query: 273 NLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFLMIDL 309
L A+ N L SIDN+P LQ EVLHLRRQLHFL ID+
Sbjct: 454 KLQAEINSLVSIDNVPPLLQEEVLHLRRQLHFLTIDI 490
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|321274072|gb|ADW80944.1| phytochelatin synthase, partial [Populus x canadensis] | Back alignment and taxonomy information |
|---|
| >gi|254935134|gb|ACT87974.1| phytochelatin synthase isoform 3 [Sesbania rostrata] gi|254935139|gb|ACT87977.1| phytochelatin synthase isoform 3 [Sesbania rostrata] | Back alignment and taxonomy information |
|---|
| >gi|297744174|emb|CBI37144.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225438071|ref|XP_002272237.1| PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255577926|ref|XP_002529835.1| conserved hypothetical protein [Ricinus communis] gi|223530663|gb|EEF32536.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|67944509|gb|AAY83876.1| phytochelatin synthase [Sesbania rostrata] | Back alignment and taxonomy information |
|---|
| >gi|449445618|ref|XP_004140569.1| PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1-like [Cucumis sativus] gi|449487365|ref|XP_004157590.1| PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|388518807|gb|AFK47465.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
| >gi|122208907|sp|Q2TSC7.1|PCS1_LOTJA RecName: Full=Glutathione gamma-glutamylcysteinyltransferase 1; AltName: Full=LjPCS1-8R; AltName: Full=Phytochelatin synthase 1 gi|33286859|gb|AAQ01752.1| phytochelatin synthase [Lotus japonicus] gi|50659121|gb|AAT80342.1| phytochelatin synthase PCS1-8R [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 316 | ||||||
| TAIR|locus:2172497 | 485 | CAD1 "CADMIUM SENSITIVE 1" [Ar | 0.946 | 0.616 | 0.413 | 5.1e-51 | |
| TAIR|locus:2024172 | 452 | PCS2 "phytochelatin synthase 2 | 0.677 | 0.473 | 0.406 | 5.3e-49 | |
| DICTYBASE|DDB_G0291187 | 626 | DDB_G0291187 "glutathione gamm | 0.386 | 0.194 | 0.370 | 1.2e-20 | |
| POMBASE|SPAC3H1.10 | 414 | pcs2 "phytochelatin synthetase | 0.357 | 0.272 | 0.336 | 1.5e-12 | |
| WB|WBGene00003960 | 426 | pcs-1 [Caenorhabditis elegans | 0.183 | 0.136 | 0.517 | 1.7e-10 |
| TAIR|locus:2172497 CAD1 "CADMIUM SENSITIVE 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 131/317 (41%), Positives = 185/317 (58%)
Query: 2 QNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVI 61
Q G GH+SPIGGY+A RDM LILDVARFKYPPHW+PL LLWEAMD+ID+STG+ RGFM+I
Sbjct: 157 QTGTGHFSPIGGYNAERDMALILDVARFKYPPHWVPLKLLWEAMDSIDQSTGKRRGFMLI 216
Query: 62 SRSHKAFVSSLMHSSGHEDLK--KVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDL 119
SR H+ L+++ +D ++AKYL EDVP + + + VE I+SV+FKS P +
Sbjct: 217 SRPHRE--PGLLYTLSCKDESWIEIAKYLKEDVPRLVSSQHVDSVEKIISVVFKSLPSNF 274
Query: 120 KDFIKCVAEFWRQEDAGVF-----SSKIXXXXXXXXXXXXXX-FKHLNRWLASEISSCKS 173
FI+ VAE ED+ S++ FKH+N++L S + S
Sbjct: 275 NQFIRWVAEIRITEDSNQNLSAEEKSRLKLKQLVLKEVHETELFKHINKFL-STVGYEDS 333
Query: 174 LISFGFNENTVFHMKL---SLLDQTCRKETNLTLAKADGAKPMTLVSGKIRTNGIDQGID 230
L ++ + ++ S + C +ET + K T+V+G + +G +Q +D
Sbjct: 334 L-TYAAAKACCQGAEILSGSPSKEFCCRETCVKCIKGPDDSEGTVVTGVVVRDGNEQKVD 392
Query: 231 MLLVPSSLTSQS--RNLLHPSTAGILTLLVLALRQRTWAGIKQENLLAQFNHLTSIDNLP 288
LLVPS+ T +P+ + T L+LAL +TW+GIK + L+ + L S+ +LP
Sbjct: 393 -LLVPSTQTECECGPEATYPAGNDVFTALLLALPPQTWSGIKDQALMHEMKQLISMASLP 451
Query: 289 TPLQLEVLHLRRQLHFL 305
T LQ EVLHLRRQL L
Sbjct: 452 TLLQEEVLHLRRQLQLL 468
|
|
| TAIR|locus:2024172 PCS2 "phytochelatin synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0291187 DDB_G0291187 "glutathione gamma-glutamylcysteinyltransferase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPAC3H1.10 pcs2 "phytochelatin synthetase" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00003960 pcs-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 316 | |||
| pfam09328 | 264 | pfam09328, Phytochelatin_C, Domain of unknown func | 2e-67 | |
| pfam05023 | 208 | pfam05023, Phytochelatin, Phytochelatin synthase | 3e-35 |
| >gnl|CDD|220182 pfam09328, Phytochelatin_C, Domain of unknown function (DUF1984) | Back alignment and domain information |
|---|
Score = 211 bits (538), Expect = 2e-67
Identities = 113/255 (44%), Positives = 151/255 (59%), Gaps = 28/255 (10%)
Query: 75 SSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVAEFWRQED 134
S HE + +AKYL+EDVP +K +++K V+ +LSV+FKS P + DFIK VAE RQE+
Sbjct: 11 SCKHESWRSMAKYLMEDVPRLLKSENLKDVQEVLSVVFKSLPANFGDFIKWVAEVRRQEE 70
Query: 135 AGVFSSKIE------KEEVLKLVEETELFKHLNRWLASEISSCKSLISFGFNEN------ 182
SK E KEEVL+ V ETELFKH+ +WL+SE S C + ++
Sbjct: 71 GNSSLSKEEKERLALKEEVLQQVRETELFKHVTKWLSSEKSCCCNCSKSSDEDSLPEIAA 130
Query: 183 -------TVFHMKLSLLDQTCRKETNLTLAKADGAKPMTLVSGKIRTNGIDQGIDMLLVP 235
+ KL + C KET + KA+G P T+VSG + ++G +QG+DML VP
Sbjct: 131 SVCCQGAAILTGKLCSSNGFCCKETCVKCVKANGDGPTTVVSGTVVSDGSEQGVDML-VP 189
Query: 236 SSLT--------SQSRNLLHPSTAGILTLLVLALRQRTWAGIKQENLLAQFNHLTSIDNL 287
S T S S +HPS+ +LT+L+LAL TW+GIK E+LLA+ L S +NL
Sbjct: 190 KSPTKTSCCNSGSSSEVAMHPSSNDVLTVLLLALPPSTWSGIKDESLLAEIQRLVSTENL 249
Query: 288 PTPLQLEVLHLRRQL 302
P LQ EVLHLRRQL
Sbjct: 250 PDLLQEEVLHLRRQL 264
|
Members of this family of functionally uncharacterized domains are found at the C-terminus of plant phytochelatin synthases. Length = 264 |
| >gnl|CDD|218387 pfam05023, Phytochelatin, Phytochelatin synthase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 316 | |||
| PF09328 | 264 | Phytochelatin_C: Domain of unknown function (DUF19 | 100.0 | |
| KOG0632 | 388 | consensus Phytochelatin synthase [Inorganic ion tr | 100.0 | |
| PF05023 | 212 | Phytochelatin: Phytochelatin synthase; InterPro: I | 99.97 | |
| PF14399 | 317 | Transpep_BrtH: NlpC/p60-like transpeptidase | 86.47 |
| >PF09328 Phytochelatin_C: Domain of unknown function (DUF1984); InterPro: IPR015407 This entry represents the C-terminal region of plant phytochelatin synthases (also known as glutathione gamma-glutamylcysteinyltransferase; 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-104 Score=730.29 Aligned_cols=237 Identities=49% Similarity=0.706 Sum_probs=232.7
Q ss_pred CCCceeEEEeeeCCcChHHHHHHHHhcCccccccCCCCCHHHHHHHHHhcCCcchhhhheeeeEEeeccccCCCCCHHH-
Q 042029 65 HKAFVSSLMHSSGHEDLKKVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVAEFWRQEDAGVFSSKIE- 143 (316)
Q Consensus 65 ~~~p~~l~~~s~~~~~W~~~ak~l~~~vp~ll~~~~~~~v~~vls~v~~slP~~~~~fikwv~Evrr~e~~~~~ls~ee- 143 (316)
+++|++|||+||+||+|.+|||||+||||.||++++++||++||++||+|||+||++||||||||||+|||+++||+||
T Consensus 1 ~r~P~lLYTlSCkhEsW~s~AKyL~eDvP~LLkse~v~~v~~vls~vf~SlPsn~~~FIKWVaEVRR~Edg~~~LS~EEk 80 (264)
T PF09328_consen 1 HRAPSLLYTLSCKHESWISMAKYLMEDVPRLLKSEDVKDVEEVLSVVFKSLPSNFGEFIKWVAEVRRQEDGGSSLSKEEK 80 (264)
T ss_pred CCCCceeEEeecCcCcHHHHHHHHHHHHHHHhhhcccCcHHHHHHHHHhcCchhHHHHhhhheeEEecccCCCCCCHHHH
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -----HHHHHHHHhcchhHHHHHHHhhcccccccccccCCCCcc-------------ceeeccccccccccccccccccc
Q 042029 144 -----KEEVLKLVEETELFKHLNRWLASEISSCKSLISFGFNEN-------------TVFHMKLSLLDQTCRKETNLTLA 205 (316)
Q Consensus 144 -----k~~vlqqv~~T~Lfk~V~~~~~s~~s~c~~~~~~~~~d~-------------~il~g~~~~~~~~cc~et~vkc~ 205 (316)
|++||||||+|+|||||++||++.+|||+++++++++|+ +||+|+++++++|||+|||+||+
T Consensus 81 ~RL~lKe~VL~Qvr~T~LFk~V~~~L~s~~s~c~~~~~~~~~dsL~~iaa~vCCQGA~iL~G~~~s~~~~Cc~etcvkc~ 160 (264)
T PF09328_consen 81 ERLALKEEVLQQVRETELFKHVTKWLSSSNSCCCNCSNSGDEDSLPDIAASVCCQGAAILSGNLGSSDGFCCKETCVKCV 160 (264)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHhccccccccccccCccccHHHHHHHHhhhhHHHHcCCCCCCCCceEccccccee
Confidence 899999999999999999999999999999999999999 89999999999999999999999
Q ss_pred ccCCCCCeeEeeceEeeCCcccceeeeeccCcccc--------CCccccCCCchhHHHHHHHhcCcchhcCCCchhHHHH
Q 042029 206 KADGAKPMTLVSGKIRTNGIDQGIDMLLVPSSLTS--------QSRNLLHPSTAGILTLLVLALRQRTWAGIKQENLLAQ 277 (316)
Q Consensus 206 k~~~~~~~tvvsg~vv~~g~eqgvD~L~vP~s~~~--------~~~~~~hPs~~DvlTvLLLaLp~~TWs~Ikde~L~~E 277 (316)
|+|||||+|||||+||++|+||||||| ||+|+++ +++++|||+++||||||||||||+||+|||||+|++|
T Consensus 161 k~n~d~~~tvvsGtVv~~g~Eq~VD~L-vP~s~~~~~~c~~~~~~~~~~hPs~~DVLTvLLLALpp~TWs~Ikde~l~~E 239 (264)
T PF09328_consen 161 KANGDGPKTVVSGTVVSGGSEQGVDVL-VPSSQTKTSCCNSGSSNEIGMHPSSNDVLTVLLLALPPSTWSGIKDEKLLAE 239 (264)
T ss_pred eeCCCCceEEEeeeEEcCCCccceeEE-eccccCCCCccCCCCCCccccCCCcccHHHHHHHhCCccccccCccHHHHHH
Confidence 999999999999999999999999999 9999998 3566999999999999999999999999999999999
Q ss_pred HHhhhccCCCChhHHHHHHHHHHHH
Q 042029 278 FNHLTSIDNLPTPLQLEVLHLRRQL 302 (316)
Q Consensus 278 ~~~LvSt~~LP~~Lq~EVlhLrrQl 302 (316)
|++||||||||++||+||+||||||
T Consensus 240 i~~LvSte~LP~lLQeEVlHLrrQL 264 (264)
T PF09328_consen 240 IQSLVSTENLPDLLQEEVLHLRRQL 264 (264)
T ss_pred HHHHhhhhhCcHHHHHHHHHHHhcC
Confidence 9999999999999999999999996
|
3.2.15 from EC), which is involved in the synthesis of phytochelatins (PC) and homophytochelatins (hPC), the heavy-metal-binding peptides of plants. This enzyme is required for detoxification of heavy metals such as cadmium and arsenate. The N-terminal region of phytochelatin synthase contains the active site, as well as four highly conserved cysteine residues that appear to play an important role in heavy-metal-induced phytochelatin catalysis. The C-terminal region is rich in cysteines, and may act as a metal sensor, whereby the Cys residues bind cadmium ions to bring them into closer proximity and transferring them to the activation site in the N-terminal catalytic domain []. The C-terminal region displays homology to the functional domains of metallothionein and metallochaperone.; GO: 0016756 glutathione gamma-glutamylcysteinyltransferase activity, 0046872 metal ion binding, 0010038 response to metal ion, 0046938 phytochelatin biosynthetic process |
| >KOG0632 consensus Phytochelatin synthase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF05023 Phytochelatin: Phytochelatin synthase; InterPro: IPR007719 This entry represents plant phytochelatin synthases (also known as glutathione gamma-glutamylcysteinyltransferase; 2 | Back alignment and domain information |
|---|
| >PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 316 | ||||
| 2btw_B | 254 | Crystal Structure Of Alr0975 Length = 254 | 4e-12 | ||
| 2btw_A | 254 | Crystal Structure Of Alr0975 Length = 254 | 4e-12 |
| >pdb|2BTW|B Chain B, Crystal Structure Of Alr0975 Length = 254 | Back alignment and structure |
|
| >pdb|2BTW|A Chain A, Crystal Structure Of Alr0975 Length = 254 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 316 | |||
| 2bu3_A | 254 | ALR0975 protein; phytochelatin synthase, PCS, acyl | 1e-29 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 |
| >2bu3_A ALR0975 protein; phytochelatin synthase, PCS, acyl-enzyme intermedia nostoc, glutathione metabolism, cysteine protease, transfer; HET: 3GC; 1.4A {Anabaena SP} SCOP: d.3.1.14 PDB: 2btw_A* 2btw_B Length = 254 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 1e-29
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 2 QNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVI 61
Q GH SP+ Y+ D LI+DV+R+KYPP W+ T LW+AM+T+D + + RGF+ +
Sbjct: 189 QERGGHISPLAAYNEQTDRFLIMDVSRYKYPPVWVKTTDLWKAMNTVDSVSQKTRGFVFV 248
Query: 62 SRSHK 66
S++
Sbjct: 249 SKTQD 253
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 316 | |||
| 2bu3_A | 254 | ALR0975 protein; phytochelatin synthase, PCS, acyl | 99.97 |
| >2bu3_A ALR0975 protein; phytochelatin synthase, PCS, acyl-enzyme intermedia nostoc, glutathione metabolism, cysteine protease, transfer; HET: 3GC; 1.4A {Anabaena SP} SCOP: d.3.1.14 PDB: 2btw_A* 2btw_B | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=245.98 Aligned_cols=66 Identities=42% Similarity=0.873 Sum_probs=62.5
Q ss_pred CCCCCccccccccccCCCCeEEEEecCCCCCCceecchHHHHHhhccccCcCCCceeEEEEecCCC
Q 042029 1 MQNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVISRSHK 66 (316)
Q Consensus 1 gQtG~GHFSPIggYh~~~D~vLILDVARfKYpp~WV~~~~L~~AM~~~D~~tg~~RG~~~is~~~~ 66 (316)
||+|+||||||||||+++|+||||||||||||||||++++||+||+++|++||++|||++|++.++
T Consensus 188 ~q~G~GHfSPIggY~~~~D~vLIlDVar~kYpp~WV~~~~L~~Am~~~D~~s~~~RG~~li~~~~~ 253 (254)
T 2bu3_A 188 GQERGGHISPLAAYNEQTDRFLIMDVSRYKYPPVWVKTTDLWKAMNTVDSVSQKTRGFVFVSKTQD 253 (254)
T ss_dssp TCSSSEEEEEEEEEETTTTEEEECCSCTTTCCCEEEEHHHHHHHHSSEETTTTEECEEEEEEC---
T ss_pred CCCCCCceeceeeEcCCCCeEEEEecCccCCCCEeeeHHHHHHHHhcccccCCCcceEEEEecccC
Confidence 799999999999999999999999999999999999999999999999999999999999998764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 316 | ||||
| d2bu3a1 | 210 | d.3.1.14 (A:29-238) Primitive phytochelatin syntha | 3e-30 |
| >d2bu3a1 d.3.1.14 (A:29-238) Primitive phytochelatin synthase {Nostoc sp. pcc 7120 [TaxId: 103690]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Phytochelatin synthase domain: Primitive phytochelatin synthase species: Nostoc sp. pcc 7120 [TaxId: 103690]
Score = 111 bits (280), Expect = 3e-30
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 2 QNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVI 61
Q GH SP+ Y+ D LI+DV+R+KYPP W+ T LW+AM+T+D + + RGF+ +
Sbjct: 150 QERGGHISPLAAYNEQTDRFLIMDVSRYKYPPVWVKTTDLWKAMNTVDSVSQKTRGFVFV 209
Query: 62 S 62
S
Sbjct: 210 S 210
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 316 | |||
| d2bu3a1 | 210 | Primitive phytochelatin synthase {Nostoc sp. pcc 7 | 99.96 |
| >d2bu3a1 d.3.1.14 (A:29-238) Primitive phytochelatin synthase {Nostoc sp. pcc 7120 [TaxId: 103690]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Phytochelatin synthase domain: Primitive phytochelatin synthase species: Nostoc sp. pcc 7120 [TaxId: 103690]
Probab=99.96 E-value=2.2e-31 Score=236.52 Aligned_cols=62 Identities=45% Similarity=0.898 Sum_probs=61.2
Q ss_pred CCCCCccccccccccCCCCeEEEEecCCCCCCceecchHHHHHhhccccCcCCCceeEEEEe
Q 042029 1 MQNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVIS 62 (316)
Q Consensus 1 gQtG~GHFSPIggYh~~~D~vLILDVARfKYpp~WV~~~~L~~AM~~~D~~tg~~RG~~~is 62 (316)
||+|+||||||||||+++|+|||||||||||||||||+++||+||+++|++||++||||+|+
T Consensus 149 ~q~G~GHfSPI~gY~~~~d~vlilDvar~kypp~Wv~~~~L~~am~t~D~~t~~~RG~i~is 210 (210)
T d2bu3a1 149 GQERGGHISPLAAYNEQTDRFLIMDVSRYKYPPVWVKTTDLWKAMNTVDSVSQKTRGFVFVS 210 (210)
T ss_dssp TCSSSEEEEEEEEEETTTTEEEECCSCTTTCCCEEEEHHHHHHHHSSEETTTTEECEEEEEE
T ss_pred CcCCCcceeeEEEEcCCCCEEEEEecCcccCCCeEeEHHHHHHHHhccccCCCCcceEEEeC
Confidence 79999999999999999999999999999999999999999999999999999999999996
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