Citrus Sinensis ID: 042084
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1124 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SZL9 | 1111 | Cellulose synthase-like p | yes | no | 0.969 | 0.981 | 0.826 | 0.0 | |
| Q7EZW6 | 1147 | Cellulose synthase-like p | yes | no | 0.968 | 0.949 | 0.732 | 0.0 | |
| Q9M9M4 | 1145 | Cellulose synthase-like p | no | no | 0.964 | 0.946 | 0.702 | 0.0 | |
| Q9LFL0 | 1145 | Cellulose synthase-like p | no | no | 0.990 | 0.972 | 0.686 | 0.0 | |
| A2YU42 | 1170 | Cellulose synthase-like p | N/A | no | 0.975 | 0.936 | 0.684 | 0.0 | |
| Q9LHZ7 | 1170 | Cellulose synthase-like p | yes | no | 0.989 | 0.950 | 0.681 | 0.0 | |
| Q8W3F9 | 1127 | Cellulose synthase-like p | no | no | 0.962 | 0.960 | 0.670 | 0.0 | |
| A2ZAK8 | 1127 | Cellulose synthase-like p | N/A | no | 0.962 | 0.960 | 0.670 | 0.0 | |
| O49323 | 1036 | Cellulose synthase-like p | no | no | 0.801 | 0.869 | 0.698 | 0.0 | |
| Q9SRW9 | 1181 | Cellulose synthase-like p | no | no | 0.970 | 0.923 | 0.600 | 0.0 |
| >sp|Q9SZL9|CSLD4_ARATH Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1 | Back alignment and function desciption |
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Score = 1952 bits (5058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 918/1111 (82%), Positives = 1008/1111 (90%), Gaps = 21/1111 (1%)
Query: 1 MASLSSQPSKKVRSGSSGGAKDSPSGRTSSSGQTVKFARRTSSGRYVSLSREDLDMSGEF 60
MAS Q SKKVR+ S SGQTVKFARRTSSGRYVSLSR+++++SGE
Sbjct: 1 MASTPPQTSKKVRN-------------NSGSGQTVKFARRTSSGRYVSLSRDNIELSGEL 47
Query: 61 SGDYMNYTVHIPPTPDNQPMDSSSVAVKAEEQYVSNSLFTGGFNSVTRAHLMDKVIESQV 120
SGDY NYTVHIPPTPDNQPM A KAEEQYVSNSLFTGGFNSVTRAHLMDKVI+S V
Sbjct: 48 SGDYSNYTVHIPPTPDNQPM-----ATKAEEQYVSNSLFTGGFNSVTRAHLMDKVIDSDV 102
Query: 121 NHPQMAGAKGSSCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDAQKDTGLCPGCKE 180
HPQMAGAKGSSC MPACDG MKDERG D++PCECRFKICRDC+MDAQK+TGLCPGCKE
Sbjct: 103 THPQMAGAKGSSCAMPACDGNVMKDERGKDVMPCECRFKICRDCFMDAQKETGLCPGCKE 162
Query: 181 PYKLGDYDDEIPDFSSGALPLPAPNKD--GGNSNMTMMKRNQNGEFDHNRWLFETKGTYG 238
YK+GD DD+ PD+SSGALPLPAP KD G N+NM+MMKRNQNGEFDHNRWLFET+GTYG
Sbjct: 163 QYKIGDLDDDTPDYSSGALPLPAPGKDQRGNNNNMSMMKRNQNGEFDHNRWLFETQGTYG 222
Query: 239 YGNAFWPQDDMYGDDGEDGFKGGMPDNSDKPWKPLSRTLPIPAAIISPYRLFIAIRFVIL 298
YGNA+WPQD+MYGDD ++G +GGM + +DKPW+PLSR +PIPAAIISPYRL I IRFV+L
Sbjct: 223 YGNAYWPQDEMYGDDMDEGMRGGMVETADKPWRPLSRRIPIPAAIISPYRLLIVIRFVVL 282
Query: 299 GFFLHWRVVNPNTDAIWLWLMSVSCEIWFAFSWILDQFPKLFPVNRSTDLEVLRDKFDMP 358
FFL WR+ NPN DAIWLWLMS+ CE+WF FSWILDQ PKL P+NRSTDLEVLRDKFDMP
Sbjct: 283 CFFLTWRIRNPNEDAIWLWLMSIICELWFGFSWILDQIPKLCPINRSTDLEVLRDKFDMP 342
Query: 359 SPSNPTGRSDLPGIDMYVSTADPEKEPPLTTANTILSILAVDYPVEKLACYVSDDGGALL 418
SPSNPTGRSDLPGID++VSTADPEKEPPL TANTILSILAVDYPVEK++CY+SDDGGALL
Sbjct: 343 SPSNPTGRSDLPGIDLFVSTADPEKEPPLVTANTILSILAVDYPVEKVSCYLSDDGGALL 402
Query: 419 TFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRTDFVKDRRKIKREYD 478
+FEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSR DFVKDRRKIKREYD
Sbjct: 403 SFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRIDFVKDRRKIKREYD 462
Query: 479 EFKVRINGLPDSIRRRSDAFNAREEMKMIKHMREGGADPTEPIKVQKATWMADGTHWPGT 538
EFKVRINGLPDSIRRRSDAFNAREEMK +K MRE G DPTEP+KV KATWMADGTHWPGT
Sbjct: 463 EFKVRINGLPDSIRRRSDAFNAREEMKALKQMRESGGDPTEPVKVPKATWMADGTHWPGT 522
Query: 539 WTVPTSEHAKGDHSGILQVMLKPPSPDPLMGSADDDKLIDFTDVDIRLPLFVYMSREKRP 598
W T EH+KGDH+GILQVMLKPPS DPL+G++DD K+IDF+D D RLP+FVY+SREKRP
Sbjct: 523 WAASTREHSKGDHAGILQVMLKPPSSDPLIGNSDD-KVIDFSDTDTRLPMFVYVSREKRP 581
Query: 599 GYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYI 658
GY+HNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKA+REGMCFMMD+GGEDICYI
Sbjct: 582 GYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAVREGMCFMMDRGGEDICYI 641
Query: 659 QFPQRFEGIDPSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNK 718
QFPQRFEGIDPSDRYANNNTVFFDGNMRALDG+QGP YVGTGTMFRRFALYGFDPP+P+K
Sbjct: 642 QFPQRFEGIDPSDRYANNNTVFFDGNMRALDGVQGPVYVGTGTMFRRFALYGFDPPNPDK 701
Query: 719 NPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGR 778
+ K++E AL +DFD DLDV LPKRFGNST+LAESIPIAEFQGRPLADHP+V YGR
Sbjct: 702 LLEKKESETEALTTSDFDPDLDVTQLPKRFGNSTLLAESIPIAEFQGRPLADHPAVKYGR 761
Query: 779 PPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGW 838
PPGALR PRDPLDA TVAE+VSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGW
Sbjct: 762 PPGALRVPRDPLDATTVAESVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGW 821
Query: 839 HSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASRKLKLLQRLAYL 898
SVYC+TKRD+FRGSAPINLTDRLHQVLRWATGSVEIFFSRNNA LAS++LK LQRLAYL
Sbjct: 822 RSVYCITKRDSFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAILASKRLKFLQRLAYL 881
Query: 899 NVGIYPFTSLFLIVYCFLPALSLISGHFIVKNLNITFLVYLLIQSLCLIGLAILEVKWSG 958
NVGIYPFTSLFLI+YCFLPA SL SG FIV+ L+I+FLVYLL+ ++CLIGLA+LEVKWSG
Sbjct: 882 NVGIYPFTSLFLILYCFLPAFSLFSGQFIVRTLSISFLVYLLMITICLIGLAVLEVKWSG 941
Query: 959 IGLEEWWRNEQFWVIGGTSAHFAAVIQGLLKVMAGIEISFTLTTKSAAEDNDDIYADLYV 1018
IGLEEWWRNEQ+W+I GTS+H AV+QG+LKV+AGIEISFTLTTKS +DN+DIYADLY+
Sbjct: 942 IGLEEWWRNEQWWLISGTSSHLYAVVQGVLKVIAGIEISFTLTTKSGGDDNEDIYADLYI 1001
Query: 1019 VKWTSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFIGGAFFSFWVLAHLYPFAKGL 1078
VKW+SLMIPPIVIAMVNI+A+V+AF+RTIY P WSK IGGAFFSFWVLAHLYPFAKGL
Sbjct: 1002 VKWSSLMIPPIVIAMVNIIAIVVAFIRTIYQAVPQWSKLIGGAFFSFWVLAHLYPFAKGL 1061
Query: 1079 MGRRGKTPTIVFVWSGLIAITLSLLWMAISP 1109
MGRRGKTPTIVFVW+GLIAIT+SLLW AI+P
Sbjct: 1062 MGRRGKTPTIVFVWAGLIAITISLLWTAINP 1092
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Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: - |
| >sp|Q7EZW6|CSLD3_ORYSJ Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9M9M4|CSLD3_ARATH Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9LFL0|CSLD2_ARATH Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=1 SV=1 | Back alignment and function description |
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| >sp|A2YU42|CSLD2_ORYSI Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9LHZ7|CSLD2_ORYSJ Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8W3F9|CSLD1_ORYSJ Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2ZAK8|CSLD1_ORYSI Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2 | Back alignment and function description |
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| >sp|O49323|CSLD1_ARATH Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9SRW9|CSLD5_ARATH Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1124 | ||||||
| 255546684 | 1122 | cellulose synthase, putative [Ricinus co | 0.994 | 0.996 | 0.858 | 0.0 | |
| 224104793 | 1116 | predicted protein [Populus trichocarpa] | 0.990 | 0.997 | 0.832 | 0.0 | |
| 224131948 | 1128 | predicted protein [Populus trichocarpa] | 0.985 | 0.982 | 0.845 | 0.0 | |
| 225428350 | 1116 | PREDICTED: cellulose synthase-like prote | 0.991 | 0.999 | 0.831 | 0.0 | |
| 297801904 | 1111 | hypothetical protein ARALYDRAFT_490578 [ | 0.969 | 0.981 | 0.829 | 0.0 | |
| 429326500 | 1126 | cellulose synthase-like protein [Populus | 0.985 | 0.984 | 0.843 | 0.0 | |
| 15233733 | 1111 | cellulose synthase-like protein D4 [Arab | 0.969 | 0.981 | 0.826 | 0.0 | |
| 429326502 | 1115 | cellulose synthase-like protein [Populus | 0.989 | 0.997 | 0.822 | 0.0 | |
| 356501469 | 1124 | PREDICTED: cellulose synthase-like prote | 0.991 | 0.991 | 0.805 | 0.0 | |
| 449453640 | 1122 | PREDICTED: cellulose synthase-like prote | 0.992 | 0.994 | 0.815 | 0.0 |
| >gi|255546684|ref|XP_002514401.1| cellulose synthase, putative [Ricinus communis] gi|223546498|gb|EEF47997.1| cellulose synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1978 bits (5124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 968/1128 (85%), Positives = 1042/1128 (92%), Gaps = 10/1128 (0%)
Query: 1 MASLSSQPSKKVRSGSSGGAKDSPSGRTSSSGQTVKFARRTSSGRYVSLSREDLDMSGEF 60
MASLSSQPSKK + GG+ S G SSSGQTVKFARRTSSGRYVSLSREDLDMSGE
Sbjct: 1 MASLSSQPSKKALR-TPGGSSGS-QGNRSSSGQTVKFARRTSSGRYVSLSREDLDMSGEI 58
Query: 61 SGDYMNYTVHIPPTPDNQPMDSSSVAVKAEEQYVSNSLFTGGFNSVTRAHLMDKVIESQV 120
SGDYMNYTVHIPPTPDNQPMDSS VAVKAEEQYVSNSLFTGGFNSVTRAHLMDKVIES+V
Sbjct: 59 SGDYMNYTVHIPPTPDNQPMDSS-VAVKAEEQYVSNSLFTGGFNSVTRAHLMDKVIESEV 117
Query: 121 NHPQMAGAKGSSCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDAQKDTGLCPGCKE 180
HPQMAG+KGSSC MPACDGK MKDERGND+IPCECRFKICRDCY+DAQK+TGLCPGCKE
Sbjct: 118 THPQMAGSKGSSCAMPACDGKIMKDERGNDVIPCECRFKICRDCYLDAQKETGLCPGCKE 177
Query: 181 PYKLGDYDDEIPDFSSGALPLPAPNKDGGNSNMTMMKRNQNGEFDHNRWLFETKGTYGYG 240
PYK+GDYDDE+PDFSSGALPLPAPNKD + NM+MMKRNQ GEFDHNRWLFETKGTYGYG
Sbjct: 178 PYKVGDYDDEVPDFSSGALPLPAPNKD--DRNMSMMKRNQTGEFDHNRWLFETKGTYGYG 235
Query: 241 NAFWPQDDMYGDDGEDGFKGGMPDNSDKPWKPLSRTLPIPAAIISPYRLFIAIRFVILGF 300
NAFWPQDDMYGDD +DGFKGGM +N DKPWKPLSR + +PAAI+SPYRL I +R V+LGF
Sbjct: 236 NAFWPQDDMYGDDDDDGFKGGMVENMDKPWKPLSRKMTMPAAIMSPYRLLILVRLVVLGF 295
Query: 301 FLHWRVVNPNTDAIWLWLMSVSCEIWFAFSWILDQFPKLFPVNRSTDLEVLRDKFDMPSP 360
FL+WRV NPN DA WLWLMSV CEIWFAFSWILDQ PKL PVNRSTDLEVLRDKF+MPSP
Sbjct: 296 FLNWRVNNPNEDARWLWLMSVVCEIWFAFSWILDQIPKLCPVNRSTDLEVLRDKFEMPSP 355
Query: 361 SNPTGRSDLPGIDMYVSTADPEKEPPLTTANTILSILAVDYPVEKLACYVSDDGGALLTF 420
SNP+GRSDLPG+D++VSTADP+KEPPL TANTILSIL+VDYPVEK+ACY+SDDGGALLTF
Sbjct: 356 SNPSGRSDLPGVDLFVSTADPDKEPPLVTANTILSILSVDYPVEKIACYISDDGGALLTF 415
Query: 421 EAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRTDFVKDRRKIKREYDEF 480
EAMAEAASFADLWVPFCRKHNIEPRNP++YFSLK+DPTKNKSRTDFVKDRR+IKREYDEF
Sbjct: 416 EAMAEAASFADLWVPFCRKHNIEPRNPETYFSLKVDPTKNKSRTDFVKDRRRIKREYDEF 475
Query: 481 KVRINGLPDSIRRRSDAFNAREEMKMIKHMREGGADPTEPIKVQKATWMADGTHWPGTWT 540
KVRINGLPDSIRRRSDAFNAREEMKM+KHMRE ADP EPIK+QKATWMADG+HWPGTW
Sbjct: 476 KVRINGLPDSIRRRSDAFNAREEMKMLKHMRESAADPMEPIKIQKATWMADGSHWPGTWA 535
Query: 541 VPTSEHAKGDHSGILQVMLKPPSPDPLMGSADDDKLIDFTDVDIRLPLFVYMSREKRPGY 600
P EH+KGDH+GILQVMLKPPSPDPLMG ADD K+IDFTDVDIRLP+FVY+SREKRPGY
Sbjct: 536 SPAPEHSKGDHAGILQVMLKPPSPDPLMGGADD-KIIDFTDVDIRLPMFVYVSREKRPGY 594
Query: 601 EHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQF 660
+HNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMD+GGE+ICYIQF
Sbjct: 595 DHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDRGGENICYIQF 654
Query: 661 PQRFEGIDPSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNP 720
PQRFEGIDPSDRYAN+NTVFFDG MRALDG+QGP YVGTG MFRRFALYGFDPP+P+K
Sbjct: 655 PQRFEGIDPSDRYANHNTVFFDGQMRALDGVQGPVYVGTGCMFRRFALYGFDPPNPDKYE 714
Query: 721 Q--NKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGR 778
Q N E L TDFD DLD+NLLPKRFGNSTMLAESIPIAE+Q RPLADHP+V YGR
Sbjct: 715 QKSNDAAETRPLTATDFDPDLDLNLLPKRFGNSTMLAESIPIAEYQARPLADHPAVKYGR 774
Query: 779 PPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGW 838
PPGALR PR+PLDA TVAE+VSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGW
Sbjct: 775 PPGALRVPREPLDATTVAESVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGW 834
Query: 839 HSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASRKLKLLQRLAYL 898
HSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASRKLKLLQRLAYL
Sbjct: 835 HSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASRKLKLLQRLAYL 894
Query: 899 NVGIYPFTSLFLIVYCFLPALSLISGHFIVKNLNITFLVYLLIQSLCLIGLAILEVKWSG 958
NVGIYPFTS+FLIVYCFLPALSL SG FIV+ L+ITFLVYLL ++CLI LAILE++WSG
Sbjct: 895 NVGIYPFTSMFLIVYCFLPALSLFSGFFIVETLSITFLVYLLTITVCLIMLAILELRWSG 954
Query: 959 IGLEEWWRNEQFWVIGGTSAHFAAVIQGLLKVMAGIEISFTLTTKSAAEDNDDIYADLYV 1018
IGLEEWWRNEQFW+I GTSAHFAAV+QGLLKV+AGIEISFTLT+KSA +D DDI+ADLY+
Sbjct: 955 IGLEEWWRNEQFWLISGTSAHFAAVVQGLLKVIAGIEISFTLTSKSAGDDVDDIFADLYI 1014
Query: 1019 VKWTSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFIGGAFFSFWVLAHLYPFAKGL 1078
VKWTSLMIPPIVIAM NI+A+ AF+RT+Y+T P WSKFIGGAFFSFWVLAHLYPFAKGL
Sbjct: 1015 VKWTSLMIPPIVIAMTNIIAIAFAFIRTVYSTVPQWSKFIGGAFFSFWVLAHLYPFAKGL 1074
Query: 1079 MGRRGKTPTIVFVWSGLIAITLSLLWMAISPPGSTPAA--TGGEFKFP 1124
MGRRGKTPTIVFVWSGLIAITLSLLW+AISPP + A TG F+FP
Sbjct: 1075 MGRRGKTPTIVFVWSGLIAITLSLLWIAISPPQAATNADGTGSGFQFP 1122
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224104793|ref|XP_002313568.1| predicted protein [Populus trichocarpa] gi|222849976|gb|EEE87523.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224131948|ref|XP_002328147.1| predicted protein [Populus trichocarpa] gi|222837662|gb|EEE76027.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225428350|ref|XP_002280032.1| PREDICTED: cellulose synthase-like protein D4-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297801904|ref|XP_002868836.1| hypothetical protein ARALYDRAFT_490578 [Arabidopsis lyrata subsp. lyrata] gi|297314672|gb|EFH45095.1| hypothetical protein ARALYDRAFT_490578 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|429326500|gb|AFZ78590.1| cellulose synthase-like protein [Populus tomentosa] | Back alignment and taxonomy information |
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| >gi|15233733|ref|NP_195532.1| cellulose synthase-like protein D4 [Arabidopsis thaliana] gi|75213628|sp|Q9SZL9.1|CSLD4_ARATH RecName: Full=Cellulose synthase-like protein D4; Short=AtCslD4 gi|4467125|emb|CAB37559.1| putative protein [Arabidopsis thaliana] gi|7270803|emb|CAB80484.1| putative protein [Arabidopsis thaliana] gi|332661491|gb|AEE86891.1| cellulose synthase-like protein D4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|429326502|gb|AFZ78591.1| cellulose synthase-like protein [Populus tomentosa] | Back alignment and taxonomy information |
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| >gi|356501469|ref|XP_003519547.1| PREDICTED: cellulose synthase-like protein D4-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449453640|ref|XP_004144564.1| PREDICTED: cellulose synthase-like protein D4-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1124 | ||||||
| TAIR|locus:2121080 | 1111 | CSLD4 "AT4G38190" [Arabidopsis | 0.968 | 0.980 | 0.812 | 0.0 | |
| TAIR|locus:2097700 | 1145 | CSLD3 "AT3G03050" [Arabidopsis | 0.964 | 0.946 | 0.694 | 0.0 | |
| TAIR|locus:2148171 | 1145 | CSLD2 "AT5G16910" [Arabidopsis | 0.774 | 0.759 | 0.716 | 0.0 | |
| TAIR|locus:2024745 | 1181 | CSLD5 "AT1G02730" [Arabidopsis | 0.604 | 0.574 | 0.581 | 0.0 | |
| TAIR|locus:2046505 | 1036 | CSLD1 "AT2G33100" [Arabidopsis | 0.439 | 0.476 | 0.711 | 0.0 | |
| UNIPROTKB|Q2QNS6 | 1215 | CSLD4 "Cellulose synthase-like | 0.548 | 0.506 | 0.560 | 0.0 | |
| TAIR|locus:2172457 | 1049 | CESA4 "cellulose synthase A4" | 0.288 | 0.308 | 0.522 | 8.6e-226 | |
| TAIR|locus:2040080 | 1065 | CESA10 "cellulose synthase 10" | 0.298 | 0.315 | 0.514 | 2.6e-224 | |
| TAIR|locus:2178193 | 1069 | CESA5 "cellulose synthase 5" [ | 0.291 | 0.306 | 0.501 | 5.3e-224 | |
| TAIR|locus:2136308 | 1084 | CESA2 "cellulose synthase A2" | 0.283 | 0.294 | 0.503 | 9.9e-224 |
| TAIR|locus:2121080 CSLD4 "AT4G38190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4896 (1728.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 896/1103 (81%), Positives = 980/1103 (88%)
Query: 29 SSSGQTVKFARRTSSGRYVSLSREDLDMSGEFSGDYMNYTVHIPPTPDNQPMDSSSVAVK 88
S SGQTVKFARRTSSGRYVSLSR+++++SGE SGDY NYTVHIPPTPDNQPM A K
Sbjct: 16 SGSGQTVKFARRTSSGRYVSLSRDNIELSGELSGDYSNYTVHIPPTPDNQPM-----ATK 70
Query: 89 AEEQYVSNSLFTGGFNSVTRAHLMDKVIESQVNHPQMAGAKGSSCGMPACDGKAMKDERG 148
AEEQYVSNSLFTGGFNSVTRAHLMDKVI+S V HPQMAGAKGSSC MPACDG MKDERG
Sbjct: 71 AEEQYVSNSLFTGGFNSVTRAHLMDKVIDSDVTHPQMAGAKGSSCAMPACDGNVMKDERG 130
Query: 149 NDIIPCECRFKICRDCYMDAQKDTGLCPGCKEPYKLGDYDDEIPDFSSGALPLPAPNKD- 207
D++PCECRFKICRDC+MDAQK+TGLCPGCKE YK+GD DD+ PD+SSGALPLPAP KD
Sbjct: 131 KDVMPCECRFKICRDCFMDAQKETGLCPGCKEQYKIGDLDDDTPDYSSGALPLPAPGKDQ 190
Query: 208 -GGNSNMTMMKRNQNGEFDHNRWLFETKGTYGYGNAFWPQDDMYGDDGEDGFKGGMPDNS 266
G N+NM+MMKRNQNGEFDHNRWLFET+GTYGYGNA+WPQD+MYGDD ++G +GGM + +
Sbjct: 191 RGNNNNMSMMKRNQNGEFDHNRWLFETQGTYGYGNAYWPQDEMYGDDMDEGMRGGMVETA 250
Query: 267 DKPWKPLSRTLPIPAAIISPYRLFIAIRFVILGFFLHWRVVNPNTDAIWLWLMSVSCEIW 326
DKPW+PLSR +PIPAAIISPYRL I IRFV+L FFL WR+ NPN DAIWLWLMS+ CE+W
Sbjct: 251 DKPWRPLSRRIPIPAAIISPYRLLIVIRFVVLCFFLTWRIRNPNEDAIWLWLMSIICELW 310
Query: 327 FAFSWILDQFPKLFPVNRSTDLEVLRDKFDMPSPSNPTGRSDLPGIDMYVSTADPEKEPP 386
F FSWILDQ PKL P+NRSTDLEVLRDKFDMPSPSNPTGRSDLPGID++VSTADPEKEPP
Sbjct: 311 FGFSWILDQIPKLCPINRSTDLEVLRDKFDMPSPSNPTGRSDLPGIDLFVSTADPEKEPP 370
Query: 387 LTTANTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPRN 446
L TANTILSILAVDYPVEK++CY+SDDGGALL+FEAMAEAASFADLWVPFCRKHNIEPRN
Sbjct: 371 LVTANTILSILAVDYPVEKVSCYLSDDGGALLSFEAMAEAASFADLWVPFCRKHNIEPRN 430
Query: 447 PDSYFSLKIDPTKNKSRTDFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFNAREEMKM 506
PDSYFSLKIDPTKNKSR DFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFNAREEMK
Sbjct: 431 PDSYFSLKIDPTKNKSRIDFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFNAREEMKA 490
Query: 507 IKHMREGGADPTEPIKVQKATWMADGTHWPGTWTVPTSEHAKGDHSGILQVMLKPPSPDP 566
+K MRE G DPTEP+KV KATWMADGTHWPGTW T EH+KGDH+GILQVMLKPPS DP
Sbjct: 491 LKQMRESGGDPTEPVKVPKATWMADGTHWPGTWAASTREHSKGDHAGILQVMLKPPSSDP 550
Query: 567 LMGSADDDKLIDFTDVDIRLPLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFIL 626
L+G++DD K+IDF+D D RLP+FVY+SREKRPGY+HNKKAGAMNALVRASAILSNGPFIL
Sbjct: 551 LIGNSDD-KVIDFSDTDTRLPMFVYVSREKRPGYDHNKKAGAMNALVRASAILSNGPFIL 609
Query: 627 NLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRYANNNTVFFDGNMR 686
NLDCDHYIYNCKA+REGMCFMMD+GGEDICYIQFPQRFEGIDPSDRYANNNTVFFDGNMR
Sbjct: 610 NLDCDHYIYNCKAVREGMCFMMDRGGEDICYIQFPQRFEGIDPSDRYANNNTVFFDGNMR 669
Query: 687 ALDGLQGPFYVGTGTMFRRFALYGFXXXXXXXXXXXXXTEMHALNPTDFDSDLDVNLLPK 746
ALDG+QGP YVGTGTMFRRFALYGF +E AL +DFD DLDV LPK
Sbjct: 670 ALDGVQGPVYVGTGTMFRRFALYGFDPPNPDKLLEKKESETEALTTSDFDPDLDVTQLPK 729
Query: 747 RFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWY 806
RFGNST+LAESIPIAEFQGRPLADHP+V YGRPPGALR PRDPLDA TVAE+VSVISCWY
Sbjct: 730 RFGNSTLLAESIPIAEFQGRPLADHPAVKYGRPPGALRVPRDPLDATTVAESVSVISCWY 789
Query: 807 EDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVL 866
EDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGW SVYC+TKRD+FRGSAPINLTDRLHQVL
Sbjct: 790 EDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDSFRGSAPINLTDRLHQVL 849
Query: 867 RWATGSVEIFFSRNNAFLASRKLKLLQRLAYLNVGIYPFTSLFLIVYCFLPALSLISGHF 926
RWATGSVEIFFSRNNA LAS++LK LQRLAYLNVGIYPFTSLFLI+YCFLPA SL SG F
Sbjct: 850 RWATGSVEIFFSRNNAILASKRLKFLQRLAYLNVGIYPFTSLFLILYCFLPAFSLFSGQF 909
Query: 927 IVKNLNITFLVYLLIQSLCLIGLAILEVKWSGIGLEEWWRNEQFWVIGGTSAHFAAVIQG 986
IV+ L+I+FLVYLL+ ++CLIGLA+LEVKWSGIGLEEWWRNEQ+W+I GTS+H AV+QG
Sbjct: 910 IVRTLSISFLVYLLMITICLIGLAVLEVKWSGIGLEEWWRNEQWWLISGTSSHLYAVVQG 969
Query: 987 LLKVMAGIEISFTLTTKSAAEDNDDIYADLYVVKWTSLXXXXXXXXXXXXXXXXXXFLRT 1046
+LKV+AGIEISFTLTTKS +DN+DIYADLY+VKW+SL F+RT
Sbjct: 970 VLKVIAGIEISFTLTTKSGGDDNEDIYADLYIVKWSSLMIPPIVIAMVNIIAIVVAFIRT 1029
Query: 1047 IYATNPSWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWMA 1106
IY P WSK IGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVW+GLIAIT+SLLW A
Sbjct: 1030 IYQAVPQWSKLIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITISLLWTA 1089
Query: 1107 ISPPGSTPAAT-----GGEFKFP 1124
I+P + PAA GG F+FP
Sbjct: 1090 INP-NTGPAAAAEGVGGGGFQFP 1111
|
|
| TAIR|locus:2097700 CSLD3 "AT3G03050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2148171 CSLD2 "AT5G16910" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2024745 CSLD5 "AT1G02730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2046505 CSLD1 "AT2G33100" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q2QNS6 CSLD4 "Cellulose synthase-like protein D4" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SZL9 | CSLD4_ARATH | 2, ., 4, ., 1, ., - | 0.8262 | 0.9697 | 0.9810 | yes | no |
| Q9LHZ7 | CSLD2_ORYSJ | 2, ., 4, ., 1, ., - | 0.6817 | 0.9893 | 0.9504 | yes | no |
| Q9M9M4 | CSLD3_ARATH | 2, ., 4, ., 1, ., - | 0.7023 | 0.9644 | 0.9467 | no | no |
| A2YU42 | CSLD2_ORYSI | 2, ., 4, ., 1, ., - | 0.6842 | 0.9750 | 0.9367 | N/A | no |
| Q7EZW6 | CSLD3_ORYSJ | 2, ., 4, ., 1, ., - | 0.7326 | 0.9688 | 0.9494 | yes | no |
| A2YCI3 | CSLD5_ORYSI | 2, ., 4, ., 1, ., - | 0.6754 | 0.8051 | 0.8942 | N/A | no |
| A2ZAK8 | CSLD1_ORYSI | 2, ., 4, ., 1, ., - | 0.6701 | 0.9626 | 0.9600 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.921 |
| 4th Layer | 2.4.1.12 | 0.914 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
 | fgenesh4_pg.C_LG_IX000009 | cellulose synthase (EC-2.4.1.12) (1116 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1124 | |||
| PLN02248 | 1135 | PLN02248, PLN02248, cellulose synthase-like protei | 0.0 | |
| pfam03552 | 716 | pfam03552, Cellulose_synt, Cellulose synthase | 0.0 | |
| PLN02195 | 977 | PLN02195, PLN02195, cellulose synthase A | 0.0 | |
| PLN02436 | 1094 | PLN02436, PLN02436, cellulose synthase A | 0.0 | |
| PLN02638 | 1079 | PLN02638, PLN02638, cellulose synthase A (UDP-form | 0.0 | |
| PLN02189 | 1040 | PLN02189, PLN02189, cellulose synthase | 0.0 | |
| PLN02400 | 1085 | PLN02400, PLN02400, cellulose synthase | 0.0 | |
| PLN02915 | 1044 | PLN02915, PLN02915, cellulose synthase A [UDP-form | 1e-177 | |
| PLN02915 | 1044 | PLN02915, PLN02915, cellulose synthase A [UDP-form | 1e-125 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 1e-120 | |
| PLN02190 | 756 | PLN02190, PLN02190, cellulose synthase-like protei | 1e-107 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 1e-11 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 3e-10 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 3e-09 | |
| PRK11498 | 852 | PRK11498, bcsA, cellulose synthase catalytic subun | 8e-09 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 1e-08 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 2e-04 | |
| pfam00535 | 168 | pfam00535, Glycos_transf_2, Glycosyl transferase f | 4e-04 | |
| COG2237 | 364 | COG2237, COG2237, Predicted membrane protein [Func | 5e-04 | |
| pfam13632 | 194 | pfam13632, Glyco_trans_2_3, Glycosyl transferase f | 0.001 | |
| PRK11498 | 852 | PRK11498, bcsA, cellulose synthase catalytic subun | 0.002 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 0.003 | |
| cd06435 | 236 | cd06435, CESA_NdvC_like, NdvC_like proteins in thi | 0.003 | |
| pfam07690 | 346 | pfam07690, MFS_1, Major Facilitator Superfamily | 0.004 |
| >gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein | Back alignment and domain information |
|---|
Score = 2365 bits (6130), Expect = 0.0
Identities = 873/1146 (76%), Positives = 975/1146 (85%), Gaps = 33/1146 (2%)
Query: 1 MASLSSQPSKKVRSGSSGGAKDSPSGRTSSSGQTVKFARRTSSGRYVSLSREDLDMSGEF 60
MAS SS+PS+K S SS A P SSS Q+VKFARRTSSGRYVSLSR+DLD+SGE
Sbjct: 1 MASSSSKPSRKSLSSSSSSA--GPPSNNSSSPQSVKFARRTSSGRYVSLSRDDLDLSGEL 58
Query: 61 SG-DYMNYTVHIPPTPDNQPMDSSSVAVKAEEQYVSNSLFTGGFNSVTRAHLMDKVIESQ 119
S DY+NYTVHIPPTPDNQPM A KAEEQYVSNS+FTGGFNSVTRAHLMDKVIES+
Sbjct: 59 SSSDYLNYTVHIPPTPDNQPM-----AGKAEEQYVSNSIFTGGFNSVTRAHLMDKVIESE 113
Query: 120 VNHPQMAGAKGSSCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDAQKDTGLCPGCK 179
V+HPQMAGAKGSSC MP CDGK M+DERG D++PCEC FKICRDCY+DA K G+CPGCK
Sbjct: 114 VSHPQMAGAKGSSCAMPGCDGKVMRDERGEDLLPCECGFKICRDCYIDAVKSGGICPGCK 173
Query: 180 EPYKLGDYDDEIPDFSSGALPLPAPNKDGGNSNMTMMK------RNQNGEFDHNRWLFET 233
EPYK+ D DDE+PD SSGALPLP P + +++MK R+Q G+FDHNRWLFET
Sbjct: 174 EPYKVTDLDDEVPDESSGALPLPPPGGSKMDRRLSLMKSNSLLMRSQTGDFDHNRWLFET 233
Query: 234 KGTYGYGNAFWPQDDMYGDDGEDGFKGGMPDNSDKPWKPLSRTLPIPAAIISPYRLFIAI 293
KGTYGYGNA WP+DD YGDDG G G + DKPW+PL+R + I AAI+SPYRL I I
Sbjct: 234 KGTYGYGNAVWPKDDGYGDDGGGGGPG---EFMDKPWRPLTRKVKISAAILSPYRLLILI 290
Query: 294 RFVILGFFLHWRVVNPNTDAIWLWLMSVSCEIWFAFSWILDQFPKLFPVNRSTDLEVLRD 353
R V+LG FL WRV NPN DA+WLW MSV CEIWFAFSW+LDQ PKL P+NR+TDL VL++
Sbjct: 291 RLVVLGLFLTWRVRNPNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRATDLAVLKE 350
Query: 354 KFDMPSPSNPTGRSDLPGIDMYVSTADPEKEPPLTTANTILSILAVDYPVEKLACYVSDD 413
KF+ PSPSNPTGRSDLPGID++VSTADPEKEPPL TANTILSILA DYPVEKLACY+SDD
Sbjct: 351 KFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDD 410
Query: 414 GGALLTFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRTDFVKDRRKI 473
GGALLTFEAMAEAASFA +WVPFCRKH+IEPRNP+SYFSLK DPTKNK R DFVKDRR++
Sbjct: 411 GGALLTFEAMAEAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRV 470
Query: 474 KREYDEFKVRINGLPDSIRRRSDAFNAREEMKMIKHMRE-GGADPTEPIKVQKATWMADG 532
KREYDEFKVRINGLPDSIRRRSDA+NAREE+K K RE GG DP+EP+KV KATWMADG
Sbjct: 471 KREYDEFKVRINGLPDSIRRRSDAYNAREEIKAKKKQRESGGGDPSEPLKVPKATWMADG 530
Query: 533 THWPGTWTVPTSEHAKGDHSGILQVMLKPPSPDPLMGSADDDKLIDFTDVDIRLPLFVYM 592
THWPGTW +H++GDH+GI+QVMLKPPS +PLMGSADD+ LIDFTDVDIRLP+ VY+
Sbjct: 531 THWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDIRLPMLVYV 590
Query: 593 SREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGG 652
SREKRPGY+HNKKAGAMNALVRASAI+SNGPFILNLDCDHYIYN AIREGMCFMMD+GG
Sbjct: 591 SREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRGG 650
Query: 653 EDICYIQFPQRFEGIDPSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFD 712
+ ICY+QFPQRFEGIDPSDRYAN+NTVFFD NMRALDGLQGP YVGTG +FRR ALYGFD
Sbjct: 651 DRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFD 710
Query: 713 PPDPN---------KNPQNKDTEMHALNP-----TDFDSDLDVNLLPKRFGNSTMLAESI 758
PP K + K E A P + D DL+++LLPKRFGNSTM A SI
Sbjct: 711 PPRAKEHSGCFGSCKFTKKKKKETSASEPEEQPDLEDDDDLELSLLPKRFGNSTMFAASI 770
Query: 759 PIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGW 818
P+AEFQGRPLADHPSV GRPPGAL PR+PLDAATVAEA+SVISCWYEDKTEWGDRVGW
Sbjct: 771 PVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGW 830
Query: 819 IYGSVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFS 878
IYGSVTEDVVTGYRMHNRGW SVYCVTKRDAFRG+APINLTDRLHQVLRWATGSVEIFFS
Sbjct: 831 IYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFS 890
Query: 879 RNNAFLASRKLKLLQRLAYLNVGIYPFTSLFLIVYCFLPALSLISGHFIVKNLNITFLVY 938
RNNA LASR+LK LQR+AYLNVGIYPFTS+FLIVYCFLPALSL SG FIV+ LN+TFLVY
Sbjct: 891 RNNALLASRRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVY 950
Query: 939 LLIQSLCLIGLAILEVKWSGIGLEEWWRNEQFWVIGGTSAHFAAVIQGLLKVMAGIEISF 998
LLI ++ L LA+LE+KWSGI LEEWWRNEQFW+IGGTSAH AAV+QGLLKV+AGIEISF
Sbjct: 951 LLIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISF 1010
Query: 999 TLTTKSAAEDNDDIYADLYVVKWTSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFI 1058
TLT+KSA +D DD +ADLY+VKWTSLMIPPI I MVN++A+ + RTIY+ P WSK +
Sbjct: 1011 TLTSKSAGDDEDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLL 1070
Query: 1059 GGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWMAISPPGSTPAATG 1118
GG FFSFWVLAHLYPFAKGLMGRRG+TPTIV+VWSGL++IT+SLLW+AISPP S A G
Sbjct: 1071 GGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLLSITISLLWVAISPP-SGAAQIG 1129
Query: 1119 GEFKFP 1124
G F+FP
Sbjct: 1130 GGFQFP 1135
|
Length = 1135 |
| >gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|215980 pfam00535, Glycos_transf_2, Glycosyl transferase family 2 | Back alignment and domain information |
|---|
| >gnl|CDD|225146 COG2237, COG2237, Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
| >gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|133057 cd06435, CESA_NdvC_like, NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1124 | |||
| PLN02248 | 1135 | cellulose synthase-like protein | 100.0 | |
| PLN02400 | 1085 | cellulose synthase | 100.0 | |
| PLN02436 | 1094 | cellulose synthase A | 100.0 | |
| PLN02638 | 1079 | cellulose synthase A (UDP-forming), catalytic subu | 100.0 | |
| PLN02915 | 1044 | cellulose synthase A [UDP-forming], catalytic subu | 100.0 | |
| PLN02189 | 1040 | cellulose synthase | 100.0 | |
| PLN02195 | 977 | cellulose synthase A | 100.0 | |
| PF03552 | 720 | Cellulose_synt: Cellulose synthase; InterPro: IPR0 | 100.0 | |
| PLN02190 | 756 | cellulose synthase-like protein | 100.0 | |
| PLN02893 | 734 | Cellulose synthase-like protein | 100.0 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 100.0 | |
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 100.0 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 100.0 | |
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 99.98 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 99.96 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 99.96 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 99.95 | |
| PF14569 | 80 | zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A. | 99.94 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 99.94 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 99.93 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.91 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 99.9 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 99.89 | |
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 99.87 | |
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 99.86 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 99.83 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.81 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 99.78 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 99.77 | |
| COG2943 | 736 | MdoH Membrane glycosyltransferase [Cell envelope b | 99.75 | |
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.73 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 99.7 | |
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.69 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.67 | |
| PF13632 | 193 | Glyco_trans_2_3: Glycosyl transferase family group | 99.66 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 99.54 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 99.53 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.36 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.29 | |
| PF14570 | 48 | zf-RING_4: RING/Ubox like zinc-binding domain; PDB | 99.28 | |
| PF13506 | 175 | Glyco_transf_21: Glycosyl transferase family 21 | 99.22 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 99.09 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 99.07 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 98.84 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 98.84 | |
| PF03142 | 527 | Chitin_synth_2: Chitin synthase; InterPro: IPR0048 | 98.78 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 98.77 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 98.73 | |
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 98.73 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 98.69 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 98.68 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 98.58 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 98.54 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 98.53 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 98.53 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 98.5 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 98.48 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 98.26 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 98.25 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 98.23 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 98.19 | |
| KOG2571 | 862 | consensus Chitin synthase/hyaluronan synthase (gly | 98.01 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 97.99 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 97.9 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 97.81 | |
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 97.77 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 97.74 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 97.56 | |
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 97.29 | |
| COG5175 | 480 | MOT2 Transcriptional repressor [Transcription] | 97.03 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 96.87 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 95.91 | |
| TIGR00570 | 309 | cdk7 CDK-activating kinase assembly factor MAT1. A | 92.51 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 90.27 | |
| KOG2547 | 431 | consensus Ceramide glucosyltransferase [Lipid tran | 89.24 | |
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 88.7 | |
| PF14446 | 54 | Prok-RING_1: Prokaryotic RING finger family 1 | 86.44 | |
| PF02364 | 817 | Glucan_synthase: 1,3-beta-glucan synthase componen | 85.37 | |
| KOG2068 | 327 | consensus MOT2 transcription factor [Transcription | 83.8 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 81.57 |
| >PLN02248 cellulose synthase-like protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=2891.08 Aligned_cols=1113 Identities=78% Similarity=1.340 Sum_probs=1038.7
Q ss_pred CCCCCCCCCcccccCCCCCCCCCCCCCCcCCCCccccccccCCccccccccccccccCCCC-CCcceeeEEcCCCCCCCC
Q 042084 1 MASLSSQPSKKVRSGSSGGAKDSPSGRTSSSGQTVKFARRTSSGRYVSLSREDLDMSGEFS-GDYMNYTVHIPPTPDNQP 79 (1124)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~pdn~p 79 (1124)
|++.+++++++..++++++..+ . ..++...++++|+|||+||||+|+||||+|++++.+ +||+||||||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (1135)
T PLN02248 1 MASSSSKPSRKSLSSSSSSAGP-P-SNNSSSPQSVKFARRTSSGRYVSLSRDDLDLSGELSSSDYLNYTVHIPPTPDNQP 78 (1135)
T ss_pred CCCcCCCCCcccccCCCCCCCC-C-CCCCCCCCCCCCCccCCCCcceeccccccccccccccccceeeEEeCCCCCCCcc
Confidence 6888888888888887777644 2 223445567999999999999999999999999986 699999999999999999
Q ss_pred CCCchhhhhhhhhhhccccccCCCCccccchhhhhhhhcccCCCCcCCCCCCccccccCCCcccccCCCCcccccccCCc
Q 042084 80 MDSSSVAVKAEEQYVSNSLFTGGFNSVTRAHLMDKVIESQVNHPQMAGAKGSSCGMPACDGKAMKDERGNDIIPCECRFK 159 (1124)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~g~~C~i~~C~~~v~~~~~G~~f~~CeC~f~ 159 (1124)
| +.++||||||+++||||||+|||+|+|+|+||++++||||++++|++|.++|||+++|+||+|++..||||+|+
T Consensus 79 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (1135)
T PLN02248 79 M-----AGKAEEQYVSNSIFTGGFNSVTRAHLMDKVIESEVSHPQMAGAKGSSCAMPGCDGKVMRDERGEDLLPCECGFK 153 (1135)
T ss_pred c-----ccchhhhccccceecCCCCccchhhhhhcccccccCCcccCCCCCCcccccCcccccccccccccCCcccccch
Confidence 9 56899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCC--CCCC-CCCccc---ccccCCCCCCCCCcccccC
Q 042084 160 ICRDCYMDAQKDTGLCPGCKEPYKLGDYDDEIPDFSSGALPLPAP--NKDG-GNSNMT---MMKRNQNGEFDHNRWLFET 233 (1124)
Q Consensus 160 iCr~Cy~~~~~~g~~Cp~Ck~~y~r~d~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~ 233 (1124)
|||+||.|+.++|++||+||++||.+|++|++.|.+.+.++++.| .+++ |+|.++ .+.++|+++|||+||++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 233 (1135)
T PLN02248 154 ICRDCYIDAVKSGGICPGCKEPYKVTDLDDEVPDESSGALPLPPPGGSKMDRRLSLMKSNSLLMRSQTGDFDHNRWLFET 233 (1135)
T ss_pred hHHhHhhhhhhcCCCCCCCccccccccccccccccccccccCCCCCCcccccccccccccchhccCCCCCCCCceeeeec
Confidence 999999999999999999999999999877776655566777765 5566 788875 4557899999999999999
Q ss_pred CcCCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceeeccCcccccchhHHHHHHHHHHHHHHHhhhcCCCCch
Q 042084 234 KGTYGYGNAFWPQDDMYGDDGEDGFKGGMPDNSDKPWKPLSRTLPIPAAIISPYRLFIAIRFVILGFFLHWRVVNPNTDA 313 (1124)
Q Consensus 234 ~~~~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~yR~~~~~~lv~l~~~l~~Ri~~~~~~a 313 (1124)
||||||||+.|+++...+++++.. ...+++|++|+||+||++|++++|+|||+++++||++|++||+||++|++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~~~~~~ 310 (1135)
T PLN02248 234 KGTYGYGNAVWPKDDGYGDDGGGG---GPGEFMDKPWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRNPNEDA 310 (1135)
T ss_pred ccccccccccCccccccCCCCCcc---ccccccccCCCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 999999999999996654332221 22378999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcccccccccCCchhHHhhhcCCCCCCCCCCCCCCCcccEEEeCCCCCCCChHHHHHHH
Q 042084 314 IWLWLMSVSCEIWFAFSWILDQFPKLFPVNRSTDLEVLRDKFDMPSPSNPTGRSDLPGIDMYVSTADPEKEPPLTTANTI 393 (1124)
Q Consensus 314 ~~lw~~~~~~E~wf~f~wlL~q~~kw~Pi~R~t~~~~L~~r~~~~~~~~~~~~~~lP~VDvfV~T~DP~~EPp~~~~nTv 393 (1124)
+|+|+++++||+||+|+|+|+|++||+||+|.||++||++|||+|+|+||+++++||+||||||||||+||||++|+|||
T Consensus 311 ~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTV 390 (1135)
T PLN02248 311 MWLWGMSVVCEIWFAFSWLLDQLPKLCPINRATDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTI 390 (1135)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccccccccccccCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCCCCcEEEEeCCCCchhhHHHHHHHHhhhhhhhhhhhhhcCCCCCCcccccccCCCCCCCCcchhHHHHHHH
Q 042084 394 LSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRTDFVKDRRKI 473 (1124)
Q Consensus 394 lS~la~DYP~~kl~~YvsDDG~s~lTf~aL~Eaa~FA~~WvPFCrk~~IepR~Pe~YFs~~~~~~~~~~~~~f~~er~~~ 473 (1124)
|||||+|||+|||+|||||||||+||||||+|||+|||+||||||||+|||||||+||++|.++++++++|+|++|||+|
T Consensus 391 LSiLA~DYP~eKLacYvSDDGgS~LTf~AL~EAa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~ 470 (1135)
T PLN02248 391 LSILAADYPVEKLACYLSDDGGALLTFEAMAEAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRV 470 (1135)
T ss_pred HHHhcccccccceeEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcccccccccccchHHHHHHHHhhhc-CCCCCCCcccccccccccCCCCCCCCcccCCCCCCcCCCc
Q 042084 474 KREYDEFKVRINGLPDSIRRRSDAFNAREEMKMIKHMRE-GGADPTEPIKVQKATWMADGTHWPGTWTVPTSEHAKGDHS 552 (1124)
Q Consensus 474 KreYee~k~rI~~l~~~~~~~~~~~n~~ee~~~~~~~~~-~~~~~~~~~~~p~~~wm~dgt~wpg~w~~~~~~~~~~dH~ 552 (1124)
||||||||+|||+|+++||+|||+||+.||++.++++++ ++.+|.+++|+||+|||+|||||||+|+.+.++|+++|||
T Consensus 471 KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~ 550 (1135)
T PLN02248 471 KREYDEFKVRINGLPDSIRRRSDAYNAREEIKAKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHA 550 (1135)
T ss_pred HHHHHHHHHHHHhhhhhccccccccchhHHHHhhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCc
Confidence 999999999999999999999999999999887766666 4788999999999999999999999999999999999999
Q ss_pred cceEEEecCCCCCCCCCCCCCcccccccccccCCCcEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCC
Q 042084 553 GILQVMLKPPSPDPLMGSADDDKLIDFTDVDIRLPLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDH 632 (1124)
Q Consensus 553 ~iiqV~l~~~~~~~~~g~~~~~~~~d~~~~~~~lP~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~ 632 (1124)
+||||||++++++|..|..++++.+|+++++++||+|||||||||||++||+||||||||+||||+||||||||||||||
T Consensus 551 ~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDm 630 (1135)
T PLN02248 551 GIIQVMLKPPSDEPLMGSADDENLIDFTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDH 630 (1135)
T ss_pred ceeEEeccCCCcccccCcccccccccccccccccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCc
Confidence 99999999999999988666778999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCC
Q 042084 633 YIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFD 712 (1124)
Q Consensus 633 y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~ 712 (1124)
|+|||++||+||||||||+|+++|||||||+|+|++++|||+||++||||++|+|+||+|||+||||||+|||+||||++
T Consensus 631 YiNns~alr~AMCf~lD~~g~~vAfVQFPQrF~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~ 710 (1135)
T PLN02248 631 YIYNSLAIREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFD 710 (1135)
T ss_pred ccCCchhHHhcchheecCCCCceEEEcCCcccCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC---------CCccccc---cCCCCC--CCccccccccccccCCcchhhcchhhhhhcCCCCCCCCCCCCCC
Q 042084 713 PPDPNKNPQ---------NKDTEMH---ALNPTD--FDSDLDVNLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGR 778 (1124)
Q Consensus 713 pp~~~~~~~---------~~~~~~~---~~~~~~--~~~e~~~~~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~ 778 (1124)
||+.++.+. +.+.+.. ....++ .++|.....++++||+|++|++|+..++.+|+++++++++++++
T Consensus 711 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~ 790 (1135)
T PLN02248 711 PPRAKEHSGCFGSCKFTKKKKKETSASEPEEQPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGR 790 (1135)
T ss_pred CcccccccccccccccccccccccccccccccccccccchhhhhhhhhhhccchhhhhhhHHHhhccccccccccccccc
Confidence 998743211 1100000 000111 12234445678999999999999998899999999999999999
Q ss_pred CCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHhCCceEEEeccCCccccccCCCCH
Q 042084 779 PPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINL 858 (1124)
Q Consensus 779 ~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL 858 (1124)
++|+++.+++++++++++||++|+||+||++|+||+||||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+
T Consensus 791 ~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L 870 (1135)
T PLN02248 791 PPGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINL 870 (1135)
T ss_pred ccccccccccCCcHHHHHHHHhhcccccccCCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcchhHHHhhhccccccccccchhcchhhhhchhhhhhHHHHHHHHHHHHHHHHhCCcccccchHHHHHH
Q 042084 859 TDRLHQVLRWATGSVEIFFSRNNAFLASRKLKLLQRLAYLNVGIYPFTSLFLIVYCFLPALSLISGHFIVKNLNITFLVY 938 (1124)
Q Consensus 859 ~a~l~QR~RWA~G~lQIl~sk~~pLl~~~~L~l~QRL~Yl~~~lypl~sl~~LiylllP~l~LltGi~~ip~~s~~fliy 938 (1124)
.++++||+|||+|++||++++++|++..++|+++|||+|+++++||++++++++|+++|++||++|++++++.+.+|++|
T Consensus 871 ~d~L~Qr~RWA~G~lQIf~sr~~Pll~~~~Lsl~QRL~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~~p~~~~~fl~y 950 (1135)
T PLN02248 871 TDRLHQVLRWATGSVEIFFSRNNALLASRRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVY 950 (1135)
T ss_pred HHHHHHHHHHhhchHHHHhccCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccHHHHHH
Confidence 99999999999999999999999988778999999999999999999999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchhhhchhhHHHhhhhHHHHHHHHHHHHHHHhccccceEeCcCCCCCCCcccccceEE
Q 042084 939 LLIQSLCLIGLAILEVKWSGIGLEEWWRNEQFWVIGGTSAHFAAVIQGLLKVMAGIEISFTLTTKSAAEDNDDIYADLYV 1018 (1124)
Q Consensus 939 llp~~ls~~l~~lLe~rwsGvsl~~wWr~qr~W~I~~tsa~l~Av~~aLLk~Lgg~k~sF~VTpK~~~~d~~~~yael~~ 1018 (1124)
+++++++++++.++|++|+|+++++|||+||||+|+++++|++|++++++|+|++++++|+||+|+.+++.+++|+++|+
T Consensus 951 ll~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~a~ly~ 1030 (1135)
T PLN02248 951 LLIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEFADLYI 1030 (1135)
T ss_pred HHHHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCcccccccccccchhee
Confidence 99888898999999999999999999999999999999999999999999999999999999999987766778999999
Q ss_pred eecccchHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHH
Q 042084 1019 VKWTSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAI 1098 (1124)
Q Consensus 1019 f~ws~LliP~~tLllLnLvAiv~Gv~r~i~~~~~~w~~l~g~l~~~fWvl~nL~Pf~kgL~gRkgr~P~~v~~~s~l~~~ 1098 (1124)
|+||++++|+++++++|++|+++|++|++++.++.|+.+++++|+++|+++|+|||+||||||+||+|+||+|||+++++
T Consensus 1031 f~wS~L~iP~ttl~llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR~gr~P~iv~v~s~ll~~ 1110 (1135)
T PLN02248 1031 VKWTSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLLSI 1110 (1135)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhccCCCCCeehHHHHHHHHH
Confidence 99999999999999999999999999999876677889999999999999999999999999999999999999999999
Q ss_pred HHHHhhheecCCCCCCCcccccccCC
Q 042084 1099 TLSLLWMAISPPGSTPAATGGEFKFP 1124 (1124)
Q Consensus 1099 ~~~llwv~i~~~~~~~~~~~~~~~~~ 1124 (1124)
+||||||+|+||.++ +++||+||||
T Consensus 1111 ~~sll~v~~~~~~~~-~~~~~~~~~~ 1135 (1135)
T PLN02248 1111 TISLLWVAISPPSGA-AQIGGGFQFP 1135 (1135)
T ss_pred HHHHHheEeccccCc-cccCceecCC
Confidence 999999999999988 8899999998
|
|
| >PLN02400 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02436 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02638 cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >PLN02915 cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >PLN02189 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02195 cellulose synthase A | Back alignment and domain information |
|---|
| >PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals | Back alignment and domain information |
|---|
| >PLN02190 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PLN02893 Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A | Back alignment and domain information |
|---|
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
| >COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
| >PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
| >PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B | Back alignment and domain information |
|---|
| >PF13506 Glyco_transf_21: Glycosyl transferase family 21 | Back alignment and domain information |
|---|
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 | Back alignment and domain information |
|---|
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
| >KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
| >COG5175 MOT2 Transcriptional repressor [Transcription] | Back alignment and domain information |
|---|
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
|---|
| >TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1 | Back alignment and domain information |
|---|
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
| >KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
|---|
| >PF14446 Prok-RING_1: Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
| >PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >KOG2068 consensus MOT2 transcription factor [Transcription] | Back alignment and domain information |
|---|
| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1124 | ||||
| 4hg6_A | 802 | Structure Of A Cellulose Synthase - Cellulose Trans | 3e-08 |
| >pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1124 | |||
| 1weo_A | 93 | Cellulose synthase, catalytic subunit (IRX3); stru | 3e-22 | |
| 1e4u_A | 78 | Transcriptional repressor NOT4; gene regulation, t | 6e-10 |
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 Length = 93 | Back alignment and structure |
|---|
Score = 91.3 bits (226), Expect = 3e-22
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
Query: 117 ESQVNHPQMAGAKGSSCGMPACDGKAMKDERGNDIIPC-ECRFKICRDCYMDAQKD-TGL 174
+ G C + C + G+ + C EC F CR CY +++ T
Sbjct: 3 SGSSGPKPLKNLDGQFCEI--CGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQN 60
Query: 175 CPGCKEPYK--------LGDYDDEIPDFSSGA 198
CP CK YK GD D+E D +
Sbjct: 61 CPQCKTRYKRLRGSPRVEGDEDEEDIDSGPSS 92
|
| >1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B Length = 78 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1124 | |||
| 4hg6_A | 802 | Cellulose synthase subunit A; membrane translocati | 100.0 | |
| 1weo_A | 93 | Cellulose synthase, catalytic subunit (IRX3); stru | 99.94 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.3 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 99.29 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 99.18 | |
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 99.15 | |
| 1qg8_A | 255 | Protein (spore coat polysaccharide biosynthesis P | 99.11 | |
| 3bcv_A | 240 | Putative glycosyltransferase protein; protein stru | 99.09 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 98.94 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 98.56 | |
| 3ckj_A | 329 | Putative uncharacterized protein; mycobacteria, un | 98.5 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 98.39 | |
| 3f1y_A | 387 | Mannosyl-3-phosphoglycerate synthase; GT-A type gl | 97.33 | |
| 2fy7_A | 287 | Beta-1,4-galactosyltransferase 1; M339H mutant, AP | 97.31 | |
| 1e4u_A | 78 | Transcriptional repressor NOT4; gene regulation, t | 96.47 | |
| 2nxv_A | 249 | ATP synthase subunits region ORF 6; majastridin, A | 94.56 | |
| 1fo8_A | 343 | Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl | 88.78 | |
| 2ea6_A | 69 | Ring finger protein 4; RNF4, RES4-26, ring domain, | 80.14 | |
| 3ng2_A | 71 | RNF4, snurf, ring finger protein 4; ring domain, E | 80.05 |
| >4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-48 Score=473.75 Aligned_cols=493 Identities=22% Similarity=0.341 Sum_probs=378.7
Q ss_pred HHHHHHHHHHHHHHHhhhcCC-CCc----hhHHHHHHHHHHHHHHHHHHHhhcccccccccCCchhHHhhhcCCCCCCCC
Q 042084 289 LFIAIRFVILGFFLHWRVVNP-NTD----AIWLWLMSVSCEIWFAFSWILDQFPKLFPVNRSTDLEVLRDKFDMPSPSNP 363 (1124)
Q Consensus 289 ~~~~~~lv~l~~~l~~Ri~~~-~~~----a~~lw~~~~~~E~wf~f~wlL~q~~kw~Pi~R~t~~~~L~~r~~~~~~~~~ 363 (1124)
+++++.+++.+.|++||++.+ +.. ..++|++++++|+++.+.|++.++..|+|..|...++.
T Consensus 68 ~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~------------- 134 (802)
T 4hg6_A 68 LLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL------------- 134 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC-------------
T ss_pred HHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC-------------
Confidence 355566667788999999876 322 45788999999999999999999999999988754321
Q ss_pred CCCCCCCcccEEEeCCCCCCCChHHHHHHHHHHHccCCCCCCcEEEEeCCCCchhhHHHHHHHHhhhhhhhhhhhhhcCC
Q 042084 364 TGRSDLPGIDMYVSTADPEKEPPLTTANTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFADLWVPFCRKHNIE 443 (1124)
Q Consensus 364 ~~~~~lP~VDvfV~T~DP~~EPp~~~~nTvlS~la~DYP~~kl~~YvsDDG~s~lTf~aL~Eaa~FA~~WvPFCrk~~Ie 443 (1124)
.++++|.|+|+|+|+ +|++.++.+|+.|++++|||.+++.|+|.|||.+.-|.+.
T Consensus 135 -~~~~~P~VSViIPty---Ne~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~--------------------- 189 (802)
T 4hg6_A 135 -QPEELPTVDILVPSY---NEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS--------------------- 189 (802)
T ss_dssp -CTTTCCCEEEEEECT---TCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC---------------------
T ss_pred -CccCCCcEEEEEEEC---CCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc---------------------
Confidence 146799999999999 8999999999999999999999999999999998744321
Q ss_pred CCCCcccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhcCcccccccccccchHHHHHHHHhhhcCCCCCCCcccc
Q 042084 444 PRNPDSYFSLKIDPTKNKSRTDFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFNAREEMKMIKHMREGGADPTEPIKV 523 (1124)
Q Consensus 444 pR~Pe~YFs~~~~~~~~~~~~~f~~er~~~KreYee~k~rI~~l~~~~~~~~~~~n~~ee~~~~~~~~~~~~~~~~~~~~ 523 (1124)
.+|+.+++.. +.+++++ .+. +
T Consensus 190 ------------------~d~~i~~~~~---~~~~~l~----~~~-------------~--------------------- 210 (802)
T 4hg6_A 190 ------------------PDPELAQKAQ---ERRRELQ----QLC-------------R--------------------- 210 (802)
T ss_dssp ------------------SSHHHHHHHH---HHHHHHH----HHH-------------H---------------------
T ss_pred ------------------CCHHHHHHHH---hhhHHHH----HHH-------------H---------------------
Confidence 1122222211 1111111 110 0
Q ss_pred cccccccCCCCCCCCcccCCCCCCcCCCccceEEEecCCCCCCCCCCCCCcccccccccccCCCcEEEEEccCCCCCCCC
Q 042084 524 QKATWMADGTHWPGTWTVPTSEHAKGDHSGILQVMLKPPSPDPLMGSADDDKLIDFTDVDIRLPLFVYMSREKRPGYEHN 603 (1124)
Q Consensus 524 p~~~wm~dgt~wpg~w~~~~~~~~~~dH~~iiqV~l~~~~~~~~~g~~~~~~~~d~~~~~~~lP~LvYVSREKrpg~~H~ 603 (1124)
+. .+.|+.|+++ ++
T Consensus 211 -------------------------------------------------------------~~-~v~~i~~~~~----~~ 224 (802)
T 4hg6_A 211 -------------------------------------------------------------EL-GVVYSTRERN----EH 224 (802)
T ss_dssp -------------------------------------------------------------HH-TCEEEECSSC----CS
T ss_pred -------------------------------------------------------------hc-CcEEEEecCC----CC
Confidence 01 1677888875 45
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcc-------hhhHHH
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPS-------DRYANN 676 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~-------D~yan~ 676 (1124)
+||||+|.+++. ++++||+.+|||+++ +|++|++.+.+|.+ ++++++||+|+.+.|.++. .++.++
T Consensus 225 GKa~alN~gl~~----a~gd~Il~lDaD~~~-~pd~L~~lv~~~~~--dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (802)
T 4hg6_A 225 AKAGNMSAALER----LKGELVVVFDADHVP-SRDFLARTVGYFVE--DPDLFLVQTPHFFINPDPIQRNLALGDRCPPE 297 (802)
T ss_dssp HHHHHHHHHHHH----CCCSEEEECCTTEEE-CTTHHHHHHHHHHH--SSSCCEEECCCCBSSCCHHHHHHTCCTTSCCT
T ss_pred cchHHHHHHHHh----cCCCEEEEECCCCCc-ChHHHHHHHHHHhc--CCCeEEEeccEEEeCCchHhhhhhHHhhhhHH
Confidence 899999999997 589999999999999 69999999999963 2489999999999987642 233456
Q ss_pred HHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhhc
Q 042084 677 NTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLAE 756 (1124)
Q Consensus 677 ~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~~ 756 (1124)
+..||....++.+.+++++++|+++++||+++..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~---------------------------------------------- 331 (802)
T 4hg6_A 298 NEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDE---------------------------------------------- 331 (802)
T ss_dssp THHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHH----------------------------------------------
T ss_pred HHHHHHHHHhhHhhcCCceecccchhhhHHHHHH----------------------------------------------
Confidence 7889999999999999999999999999999964
Q ss_pred chhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHhC
Q 042084 757 SIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNR 836 (1124)
Q Consensus 757 s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~r 836 (1124)
+| ||...+++||.+++++++.+
T Consensus 332 ------vG----------------------------------------------------gf~~~~~~ED~~l~~rl~~~ 353 (802)
T 4hg6_A 332 ------AG----------------------------------------------------GFAGETITEDAETALEIHSR 353 (802)
T ss_dssp ------HT----------------------------------------------------TCCCSSSSHHHHHHHHHHTT
T ss_pred ------cC----------------------------------------------------CcCCCCcchHHHHHHHHHHc
Confidence 22 66677889999999999999
Q ss_pred CceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhhccccccccccchhcchhhhhchhhhhhHHHHHHHHHH
Q 042084 837 GWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASRKLKLLQRLAYLNVGIYPFTSLFLIVYCFL 916 (1124)
Q Consensus 837 GWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk~~pLl~~~~L~l~QRL~Yl~~~lypl~sl~~Liylll 916 (1124)
||+++|++ .+.+++++|+|+.++++||.||++|.+|+++. ++|++ .+++++.||+.|+...++++.+++.++++++
T Consensus 354 G~ri~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~q~l~~-~~pl~-~~~l~~~~rl~~l~~~~~~~~~~~~li~ll~ 429 (802)
T 4hg6_A 354 GWKSLYID--RAMIAGLQPETFASFIQQRGRWATGMMQMLLL-KNPLF-RRGLGIAQRLCYLNSMSFWFFPLVRMMFLVA 429 (802)
T ss_dssp TCCEEECC--CCCEEECCCCSHHHHHHHHHHHHHHHHHHHHH-SCTTS-CSSCCHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred CCeEEEec--CCEEEecCCCCHHHHHHHHHHHHccHHHHHHH-hCccc-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999984 35678999999999999999999999999985 46665 6889999999999999999999999999999
Q ss_pred HHHHHHhCCcccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhchhhHHHhhhhHHHHHHHHHHHHHHHhcccc
Q 042084 917 PALSLISGHFIVKNLNITFLVYLLIQSLCLIGLAILEVKWSGIGLEEWWRNEQFWVIGGTSAHFAAVIQGLLKVMAGIEI 996 (1124)
Q Consensus 917 P~l~LltGi~~ip~~s~~fliyllp~~ls~~l~~lLe~rwsGvsl~~wWr~qr~W~I~~tsa~l~Av~~aLLk~Lgg~k~ 996 (1124)
|+++++++..++......++.+++|+++...+... ..+ |.....|| ++.++.+... ..+.+++.++ +.+++.
T Consensus 430 p~~~ll~~~~~~~~~~~~~~~~~lp~~l~~~~~~~--~~~-~~~r~~~~-~~l~~~~~~~-~~~~a~l~~l---~~~~~~ 501 (802)
T 4hg6_A 430 PLIYLFFGIEIFVATFEEVLAYMPGYLAVSFLVQN--ALF-ARQRWPLV-SEVYEVAQAP-YLARAIVTTL---LRPRSA 501 (802)
T ss_dssp HHHHHHHCCCCSCCCHHHHHHHHHHHHHHHHHHHH--HHH-TTTSCTTH-HHHHHHHHHH-HHHHHHHHHH---HSTTCC
T ss_pred HHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHHHH--HHh-cCcHHHHH-HHHHHHHHHH-HHHHHHHHHH---hCCCCC
Confidence 99999999999888777777777777654443321 112 21111233 3444433111 1233444333 446788
Q ss_pred ceEeCcCCCCCCCcccccceEEeecccchHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 042084 997 SFTLTTKSAAEDNDDIYADLYVVKWTSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFIGGAFFSFWVLAHLYPFAK 1076 (1124)
Q Consensus 997 sF~VTpK~~~~d~~~~yael~~f~ws~LliP~~tLllLnLvAiv~Gv~r~i~~~~~~w~~l~g~l~~~fWvl~nL~Pf~k 1076 (1124)
+|.||+|+...+. .+ + + .++.|.+++++++++++++|+++...... ...+.+++++|+++|++.+.-
T Consensus 502 ~f~VT~Kg~~~~~--~~-----~-~-~~~~p~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~w~~~~l~~l~~ 568 (802)
T 4hg6_A 502 RFAVTAKDETLSE--NY-----I-S-PIYRPLLFTFLLCLSGVLATLVRWVAFPG----DRSVLLVVGGWAVLNVLLVGF 568 (802)
T ss_dssp CCCCCCCCCCCSS--CC-----B-C-TTCHHHHHHHHHHHHHHHHHHHHHHHCGG----GHHHHHHHHHHHHHHHHHHHH
T ss_pred cceECCCCccccc--cc-----h-h-hHHHHHHHHHHHHHHHHHHHHHHHhccCC----ccchhhhhhHHHHHHHHHHHH
Confidence 9999999875432 12 1 2 56789999999999999999998775432 234567899999999999999
Q ss_pred HHhc
Q 042084 1077 GLMG 1080 (1124)
Q Consensus 1077 gL~g 1080 (1124)
++..
T Consensus 569 ~~~~ 572 (802)
T 4hg6_A 569 ALRA 572 (802)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 8853
|
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* | Back alignment and structure |
|---|
| >3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* | Back alignment and structure |
|---|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A | Back alignment and structure |
|---|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
| >3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* | Back alignment and structure |
|---|
| >2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... | Back alignment and structure |
|---|
| >1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B | Back alignment and structure |
|---|
| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* | Back alignment and structure |
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| >1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* | Back alignment and structure |
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| >2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
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| >3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus} | Back alignment and structure |
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Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1124 | ||||
| d1weoa_ | 93 | g.44.1.1 (A:) Cellulose synthase A catalytic subun | 2e-04 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 93 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 39.4 bits (92), Expect = 2e-04
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 10/56 (17%)
Query: 145 DERGNDIIPC-ECRFKICRDCYMDAQKD-TGLCPGCKEPYK--------LGDYDDE 190
G+ + C EC F CR CY +++ T CP CK YK GD D+E
Sbjct: 29 TVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDEDEE 84
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1124 | |||
| d1weoa_ | 93 | Cellulose synthase A catalytic subunit 7, IRX3 {Th | 99.95 | |
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 99.22 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 98.05 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 97.77 | |
| d1ur6b_ | 52 | Not-4 N-terminal RING finger domain {Human (Homo s | 95.47 | |
| d1g25a_ | 65 | TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9 | 92.99 | |
| d1vyxa_ | 60 | IE1B protein (ORF K3), N-terminal domain {Kaposi's | 88.5 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.95 E-value=9.2e-29 Score=219.77 Aligned_cols=74 Identities=31% Similarity=0.677 Sum_probs=67.2
Q ss_pred ccCCCCcCCCCCCccccccCCCcccccCCCCccccc-ccCCccchhhhhhhhhcC-CCCCCCCCCCcC--------CCCC
Q 042084 119 QVNHPQMAGAKGSSCGMPACDGKAMKDERGNDIIPC-ECRFKICRDCYMDAQKDT-GLCPGCKEPYKL--------GDYD 188 (1124)
Q Consensus 119 ~~~~~~~~~~~g~~C~i~~C~~~v~~~~~G~~f~~C-eC~f~iCr~Cy~~~~~~g-~~Cp~Ck~~y~r--------~d~~ 188 (1124)
+..+++++.+++|+||| |||+||++++|++|||| ||+|||||+||||||||| |+|||||++||| ||++
T Consensus 5 ~~g~kp~~~~~~q~Cqi--CGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr~kgsprv~gDe~ 82 (93)
T d1weoa_ 5 SSGPKPLKNLDGQFCEI--CGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDED 82 (93)
T ss_dssp SSSSSCCSCCSSCBCSS--SCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTSCC
T ss_pred CCCCCChhhcccchhhh--cccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhhhhcCCCCCCCCcc
Confidence 44589999999999999 99999999999999999 999999999999999999 999999999998 5555
Q ss_pred CCCCCC
Q 042084 189 DEIPDF 194 (1124)
Q Consensus 189 ~~~~~~ 194 (1124)
||+.||
T Consensus 83 e~~~d~ 88 (93)
T d1weoa_ 83 EEDIDS 88 (93)
T ss_dssp CCCSCC
T ss_pred cccccc
Confidence 555553
|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]} | Back information, alignment and structure |
|---|