Citrus Sinensis ID: 042091
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1023 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LU41 | 1086 | Calcium-transporting ATPa | yes | no | 0.993 | 0.935 | 0.709 | 0.0 | |
| Q9SZR1 | 1069 | Calcium-transporting ATPa | no | no | 0.958 | 0.917 | 0.684 | 0.0 | |
| Q9LF79 | 1074 | Calcium-transporting ATPa | no | no | 0.953 | 0.907 | 0.675 | 0.0 | |
| Q9LY77 | 1033 | Calcium-transporting ATPa | no | no | 0.882 | 0.874 | 0.562 | 0.0 | |
| Q9LIK7 | 1017 | Putative calcium-transpor | no | no | 0.876 | 0.882 | 0.560 | 0.0 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 0.920 | 0.926 | 0.474 | 0.0 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.915 | 0.914 | 0.461 | 0.0 | |
| O81108 | 1014 | Calcium-transporting ATPa | no | no | 0.922 | 0.930 | 0.474 | 0.0 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.913 | 0.906 | 0.459 | 0.0 | |
| O64806 | 1015 | Putative calcium-transpor | no | no | 0.919 | 0.927 | 0.483 | 0.0 |
| >sp|Q9LU41|ACA9_ARATH Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 1522 bits (3940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 775/1093 (70%), Positives = 887/1093 (81%), Gaps = 77/1093 (7%)
Query: 1 MSTSSVNGLL----SPR--DVEVGP--SNDGSDVVLEDDVSSDPFDIAQAKHVPVASLKR 52
MSTSS NGLL S R D+E G + + SD DPFDI K+ V SL+R
Sbjct: 1 MSTSSSNGLLLTSMSGRHDDMEAGSAKTEEHSDHEELQHDPDDPFDIDNTKNASVESLRR 60
Query: 53 WRQASLVLNASRRFRYTLDLKKEEEKEKRRRMIRAHAQVIR------------------- 93
WRQA+LVLNASRRFRYTLDL KEE + RRRMIRAHAQVIR
Sbjct: 61 WRQAALVLNASRRFRYTLDLNKEEHYDNRRRMIRAHAQVIRAALLFKLAGEQQIAFGSST 120
Query: 94 --------------------------------VKGLSELLKTNLEKGISGDDTDLSNRRN 121
VKG++E LK+N+E+GI+ D+ ++ +R+N
Sbjct: 121 PAASTGNFDIDLEKLVSMTRNQNMSNLQQYGGVKGVAEKLKSNMEQGINEDEKEVIDRKN 180
Query: 122 SFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAF 181
+FGSNTYP KKG++F FLWEAWQDLTLIILI+AA+ SLALGIKTEG++EGW DG SIAF
Sbjct: 181 AFGSNTYPKKKGKNFFMFLWEAWQDLTLIILIIAAVTSLALGIKTEGLKEGWLDGGSIAF 240
Query: 182 AVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGD 241
AV LVIVVTA+SDYRQSLQFQNLN EKRNIQLE MRGG+ VKISI+DVVVG+++PLRIGD
Sbjct: 241 AVLLVIVVTAVSDYRQSLQFQNLNDEKRNIQLEVMRGGRTVKISIYDVVVGDVIPLRIGD 300
Query: 242 QVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTE 301
QVPADGVL++GHSLAIDESSMTGESKIV KD K+PFLMSGCKVADGVG M+VTGVGINTE
Sbjct: 301 QVPADGVLISGHSLAIDESSMTGESKIVHKDQKSPFLMSGCKVADGVGNMLVTGVGINTE 360
Query: 302 WGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSS 361
WGLLMASISED GEETPLQVRLNG+ATFIGIVGL+VA +VL LLVR+FTG T +G++
Sbjct: 361 WGLLMASISEDTGEETPLQVRLNGLATFIGIVGLSVALVVLVALLVRYFTGTTQDTNGAT 420
Query: 362 AFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMAD 421
F+KG TS+SD VD +KI TIA TIVVVAVPEGLPLAVTLTLAYSMRKMMAD
Sbjct: 421 QFIKGTTSISDIVDDCVKIFTIAV-------TIVVVAVPEGLPLAVTLTLAYSMRKMMAD 473
Query: 422 KALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYL 481
KALVRRLSACETMGSATTICSDKTGTLTLN+MTVVE + G K++ D+ S +H ++ L
Sbjct: 474 KALVRRLSACETMGSATTICSDKTGTLTLNQMTVVETYAGGSKMDVADNPSGLHPKLVAL 533
Query: 482 LSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFN 541
+SEG+AQNTTGN+F PKDG VE+SGSPTEKAILSWA KLGMKFD +RSE+ ++H FPFN
Sbjct: 534 ISEGVAQNTTGNIFHPKDGGEVEISGSPTEKAILSWAYKLGMKFDTIRSESAIIHAFPFN 593
Query: 542 SEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMA 601
SEKKRGGVAV R +SEV +HWKGAAE++LA CT+Y+D++G LQSI+ ++FF+ A+D MA
Sbjct: 594 SEKKRGGVAVLRGDSEVFIHWKGAAEIVLACCTQYMDSNGTLQSIESQKEFFRVAIDSMA 653
Query: 602 ARSLRCVAIAYRFI-----------LDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCR 650
SLRCVAIA R LDKW LPE+ELILLAIVGIKDPCRPGV++AV++C
Sbjct: 654 KNSLRCVAIACRTQELNQVPKEQEDLDKWALPEDELILLAIVGIKDPCRPGVREAVRICT 713
Query: 651 DAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEIT 710
AGVKVRMVTGDNLQTAKAIALECGIL SD EA +P IIEGKVFR LS+KERE+VA++IT
Sbjct: 714 SAGVKVRMVTGDNLQTAKAIALECGILSSDTEAVEPTIIEGKVFRELSEKEREQVAKKIT 773
Query: 711 VMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI 770
VMGRSSPNDKLLLVQALRK GDVVAVTGDGTNDAPALHEADIGL+MGI GTEVAKE+SDI
Sbjct: 774 VMGRSSPNDKLLLVQALRKNGDVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDI 833
Query: 771 IILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLL 830
IILDDNFASVVKVVRWGRSV+ANIQKFIQFQLTVNVAAL+INVVAA+SSGDVPL AVQLL
Sbjct: 834 IILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAMSSGDVPLKAVQLL 893
Query: 831 WVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNF 890
WVNLIMDTLGALALATEPPTDHLMHR PVGR+EPLITNIMWRNL+VQ+ YQV VLLVLNF
Sbjct: 894 WVNLIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLLVQSFYQVAVLLVLNF 953
Query: 891 KGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGI 950
G SIL L E HA +VKNTMIFNAFV+ QIFNEFNARKPDE+NVF GV KN LF+ I
Sbjct: 954 AGLSILGLNHENHAHAVEVKNTMIFNAFVMCQIFNEFNARKPDEMNVFRGVNKNPLFVAI 1013
Query: 951 IGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYF 1010
+G+T +LQIII+ FLGKF TV+L W+LWLASI IGL SWPLA++GK+IPVPKTP++VYF
Sbjct: 1014 VGVTFILQIIIVTFLGKFAHTVRLGWQLWLASIIIGLVSWPLAIVGKLIPVPKTPMSVYF 1073
Query: 1011 VRPFQRCINARRS 1023
+PF++ +R +
Sbjct: 1074 KKPFRKYKASRNA 1086
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q9SZR1|ACA10_ARATH Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1438 bits (3722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 732/1070 (68%), Positives = 855/1070 (79%), Gaps = 89/1070 (8%)
Query: 11 SPR----DVEVGPSNDGSDVVLEDDVSSDPFDIAQAKHVPVASLKRWRQASLVLNASRRF 66
SPR DVE G S S ED PFDIA K+ PV L+RWRQA+LVLNASRRF
Sbjct: 8 SPRGEDKDVEAGTS---SFTEYEDS----PFDIASTKNAPVERLRRWRQAALVLNASRRF 60
Query: 67 RYTLDLKKEEEKEKRRRMIRAHAQVIR--------------------------------- 93
RYTLDLK+EE+K++ R +RAHAQ IR
Sbjct: 61 RYTLDLKREEDKKQMLRKMRAHAQAIRAAHLFKAAASRVTGIASPLPTPGGGDFGIGQEQ 120
Query: 94 ------------------VKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRS 135
V+GLS+LLKTNLEKGI GDD D+ R+++FGSNTYP KKGRS
Sbjct: 121 IVSISRDQNIGALQELGGVRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSNTYPQKKGRS 180
Query: 136 FLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDY 195
F F+WEA QDLTLIILIVAA+ASLALGIKTEG+E+GWYDG SIAFAV LVIVVTA SDY
Sbjct: 181 FWRFVWEASQDLTLIILIVAAVASLALGIKTEGIEKGWYDGISIAFAVLLVIVVTATSDY 240
Query: 196 RQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSL 255
RQSLQFQNLN+EKRNI+LE R G+ V+ISI+D+VVG+++PL IGDQVPADGVLV GHSL
Sbjct: 241 RQSLQFQNLNEEKRNIRLEVTRDGRRVEISIYDIVVGDVIPLNIGDQVPADGVLVAGHSL 300
Query: 256 AIDESSMTGESKIVRKDH-KTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNG 314
A+DESSMTGESKIV+K+ K PFLMSGCKVADG GTM+VTGVG+NTEWGLLMAS+SEDNG
Sbjct: 301 AVDESSMTGESKIVQKNSTKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMASVSEDNG 360
Query: 315 EETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAV 374
ETPLQVRLNGVATFIGIVGL VA +VL VL+VR+FTGHT E G F+ G+T +
Sbjct: 361 GETPLQVRLNGVATFIGIVGLTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKTKFEHVL 420
Query: 375 DGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETM 434
D +++I T+A TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETM
Sbjct: 421 DDLVEIFTVAV-------TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETM 473
Query: 435 GSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNV 494
GSATTICSDKTGTLTLNEMTVVE + G +K++ PD SS++ S +L EGIA NTTG+V
Sbjct: 474 GSATTICSDKTGTLTLNEMTVVECYAGLQKMDSPDSSSKLPSAFTSILVEGIAHNTTGSV 533
Query: 495 FVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRI 554
F + GE ++VSGSPTE+AIL+WA+KLGM FD ++SE++ + FPFNSEKKRGGVAVK
Sbjct: 534 FRSESGE-IQVSGSPTERAILNWAIKLGMDFDALKSESSAVQFFPFNSEKKRGGVAVKSP 592
Query: 555 NSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDED---FFKAAVDEMAARSLRCVAIA 611
+S VH+HWKGAAE++L SCT Y+D +D ED K A+D+MAARSLRCVAIA
Sbjct: 593 DSSVHIHWKGAAEIVLGSCTHYMDESESF--VDMSEDKMGGLKDAIDDMAARSLRCVAIA 650
Query: 612 YRFI-----------LDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVT 660
+R L +W LPE++LILLAIVGIKDPCRPGVK++V LC+ AGVKVRMVT
Sbjct: 651 FRTFEADKIPTDEEQLSRWELPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVT 710
Query: 661 GDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDK 720
GDN+QTAKAIALECGIL SD++A++PN+IEGKVFR+ S++ER+++ +EI+VMGRSSPNDK
Sbjct: 711 GDNIQTAKAIALECGILASDSDASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDK 770
Query: 721 LLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASV 780
LLLVQ+L++ G VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE SDIIILDDNF SV
Sbjct: 771 LLLVQSLKRRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESV 830
Query: 781 VKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLG 840
VKVVRWGRSV+ANIQKFIQFQLTVNVAAL+INVVAAIS+G+VPL AVQLLWVNLIMDTLG
Sbjct: 831 VKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLG 890
Query: 841 ALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEG 900
ALALATEPPTDHLM R PVGR+EPLITNIMWRNL +QA+YQVTVLL+LNF+G SILHL+
Sbjct: 891 ALALATEPPTDHLMDRAPVGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKS 950
Query: 901 ERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQII 960
+ +A VKNT+IFNAFV+ Q+FNEFNARKPDEIN+F GV +N+LF+GII IT VLQ++
Sbjct: 951 --KPNAERVKNTVIFNAFVICQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVV 1008
Query: 961 IIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYF 1010
I+EFLG F T KLDW++WL IGIG SWPLAV+GK+IPVP+TP++ YF
Sbjct: 1009 IVEFLGTFASTTKLDWEMWLVCIGIGSISWPLAVIGKLIPVPETPVSQYF 1058
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1412 bits (3656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 714/1057 (67%), Positives = 837/1057 (79%), Gaps = 82/1057 (7%)
Query: 14 DVEVGPSNDGSDVVLEDDVSSDPFDIAQAKHVPVASLKRWRQASLVLNASRRFRYTLDLK 73
DVE G S D SD F I +K+ + L++WR+A+LVLNASRRFRYTLDLK
Sbjct: 16 DVESGKSEHA-------DSDSDTFYIP-SKNASIERLQQWRKAALVLNASRRFRYTLDLK 67
Query: 74 KEEEKEKRRRMIRAHAQVI----------------------------------------- 92
KE+E + R+ IR+HA +
Sbjct: 68 KEQETREMRQKIRSHAHALLAANRFMDMGRESGVEKTTGPATPAGDFGITPEQLVIMSKD 127
Query: 93 ----------RVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWE 142
+GL+ LLKTN EKGISGDD DL R+ +GSNTYP KKG+ FL FLW+
Sbjct: 128 HNSGALEQYGGTQGLANLLKTNPEKGISGDDDDLLKRKTIYGSNTYPRKKGKGFLRFLWD 187
Query: 143 AWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQ 202
A DLTLIIL+VAA+ASLALGIKTEG++EGWYDG SIAFAV LVIVVTA+SDY+QSLQFQ
Sbjct: 188 ACHDLTLIILMVAAVASLALGIKTEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQSLQFQ 247
Query: 203 NLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSM 262
NLN EKRNI LE +RGG+ V+ISI+D+VVG+++PL IG+QVPADGVL++GHSLA+DESSM
Sbjct: 248 NLNDEKRNIHLEVLRGGRRVEISIYDIVVGDVIPLNIGNQVPADGVLISGHSLALDESSM 307
Query: 263 TGESKIVRKD-HKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQV 321
TGESKIV KD +K PFLMSGCKVADG G+M+VTGVG+NTEWGLLMASISEDNGEETPLQV
Sbjct: 308 TGESKIVNKDANKDPFLMSGCKVADGNGSMLVTGVGVNTEWGLLMASISEDNGEETPLQV 367
Query: 322 RLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIV 381
RLNGVATFIG +GLAVA VL +LL R+FTGHT +G FVKG+T V +D V+K++
Sbjct: 368 RLNGVATFIGSIGLAVAAAVLVILLTRYFTGHTKDNNGGPQFVKGKTKVGHVIDDVVKVL 427
Query: 382 TIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTIC 441
T+A TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTIC
Sbjct: 428 TVAV-------TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTIC 480
Query: 442 SDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGE 501
SDKTGTLTLN+MTVVE++ G KK D+ Q+ + + L+ EGI+QNTTG++FVP+ G
Sbjct: 481 SDKTGTLTLNQMTVVESYAGGKKT----DTEQLPATITSLVVEGISQNTTGSIFVPEGGG 536
Query: 502 AVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVH 561
+E SGSPTEKAIL W VKLGM F+ RS++++LH FPFNSEKKRGGVAVK + EVHVH
Sbjct: 537 DLEYSGSPTEKAILGWGVKLGMNFETARSQSSILHAFPFNSEKKRGGVAVKTADGEVHVH 596
Query: 562 WKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFI----- 615
WKGA+E++LASC Y+D DG + + D+ FFK +++MA R+LRCVA+A+R
Sbjct: 597 WKGASEIVLASCRSYIDEDGNVAPMTDDKASFFKNGINDMAGRTLRCVALAFRTYEAEKV 656
Query: 616 -----LDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAI 670
L KW LPE++LILLAIVGIKDPCRPGVKD+V LC++AGVKVRMVTGDN+QTA+AI
Sbjct: 657 PTGEELSKWVLPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAI 716
Query: 671 ALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKG 730
ALECGIL SDA+ ++P +IEGK FR ++D ER+K++ +I+VMGRSSPNDKLLLVQ+LR+
Sbjct: 717 ALECGILSSDADLSEPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQ 776
Query: 731 GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSV 790
G VVAVTGDGTNDAPALHEADIGLAMGI GTEVAKE+SDIIILDDNFASVVKVVRWGRSV
Sbjct: 777 GHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSV 836
Query: 791 FANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPT 850
+ANIQKFIQFQLTVNVAAL+INVVAAISSGDVPL AVQLLWVNLIMDTLGALALATEPPT
Sbjct: 837 YANIQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPT 896
Query: 851 DHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVK 910
DHLM R PVGRKEPLITNIMWRNL++QA+YQV+VLL LNF+G SIL LE E +HA+ VK
Sbjct: 897 DHLMGRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVK 956
Query: 911 NTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTK 970
NT+IFNAFVL Q FNEFNARKPDE N+F GV KN LFMGII IT VLQ+II+EFLGKF
Sbjct: 957 NTIIFNAFVLCQAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVIIVEFLGKFAS 1016
Query: 971 TVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLA 1007
T KL+WK WL +GIG+ SWPLA++GK IPVP P++
Sbjct: 1017 TTKLNWKQWLICVGIGVISWPLALVGKFIPVPAAPIS 1053
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LY77|ACA12_ARATH Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/925 (56%), Positives = 672/925 (72%), Gaps = 22/925 (2%)
Query: 94 VKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILI 153
V+G++ L+TN KGI G++ ++S RR+ FGSNTY + L F++EA++DLT++IL+
Sbjct: 111 VEGVAASLRTNPTKGIHGNEQEVSRRRDLFGSNTYHKPPPKGLLFFVYEAFKDLTILILL 170
Query: 154 VAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQL 213
V AI SL GIK G++EGWY+G SI AVFLVIVV+A+S++RQ QF L+K NI++
Sbjct: 171 VCAIFSLGFGIKEHGIKEGWYEGGSIFVAVFLVIVVSALSNFRQERQFDKLSKISNNIKV 230
Query: 214 EAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDH 273
E +R + ISIFDVVVG++V L+IGDQ+PADG+ + GHSL +DESSMTGES + DH
Sbjct: 231 EVLRDSRRQHISIFDVVVGDVVFLKIGDQIPADGLFLEGHSLQVDESSMTGESDHLEVDH 290
Query: 274 K-TPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGI 332
K PFL SG K+ DG M+V VG++T WG M+SI++D+ E TPLQVRL+ + + IG
Sbjct: 291 KDNPFLFSGTKIVDGFAQMLVVSVGMSTTWGQTMSSINQDSSERTPLQVRLDTLTSTIGK 350
Query: 333 VGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQV 392
+GL VA LVL VLLVR+FTG+T KE G + +T V V+ V++IV A
Sbjct: 351 IGLTVAALVLVVLLVRYFTGNTEKE-GKREYNGSKTPVDTVVNSVVRIVAAAVTIVV--- 406
Query: 393 TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNE 452
VA+PEGLPLAVTLTLAYSM++MM+D+A+VR+LSACETMGSAT IC+DKTGTLTLNE
Sbjct: 407 ----VAIPEGLPLAVTLTLAYSMKRMMSDQAMVRKLSACETMGSATVICTDKTGTLTLNE 462
Query: 453 MTVVEAFIGRKKINPPDDSSQMHSI-VIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTE 511
M V + ++G++ I+ +DS++M S V+ LL +G NTTG+V V G E SGSPTE
Sbjct: 463 MKVTKFWLGQESIH--EDSTKMISPDVLDLLYQGTGLNTTGSVCVSDSGSTPEFSGSPTE 520
Query: 512 KAILSWAV-KLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKR-INSEVHVHWKGAAEMI 569
KA+LSW V LGM + V+ + VL V F+S KKR GV V+R ++ VHVHWKGAAEM+
Sbjct: 521 KALLSWTVLNLGMDMESVKQKHEVLRVETFSSAKKRSGVLVRRKSDNTVHVHWKGAAEMV 580
Query: 570 LASCTKYLDTDGQLQSIDGD-EDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELIL 628
LA C+ Y + G + +D + +A + MAA SLRC+A A++ + L E+ L L
Sbjct: 581 LAMCSHYYTSTGSVDLMDSTAKSRIQAIIQGMAASSLRCIAFAHKIASNDSVLEEDGLTL 640
Query: 629 LAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNI 688
+ IVG+KDPCRPGV AV+ C+ AGV ++M+TGDN+ TAKAIA ECGIL + + + +
Sbjct: 641 MGIVGLKDPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAIAFECGILDHNDKDEEDAV 700
Query: 689 IEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALH 748
+EG FR +D+ER + +I VM RSSP+DKLL+V+ LR G VVAVTGDGTNDAPAL
Sbjct: 701 VEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGHVVAVTGDGTNDAPALK 760
Query: 749 EADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAA 808
EADIGL+MGIQGTEVAKE+SDI+ILDDNFASV V++WGR V+ NIQKFIQFQLTVNVAA
Sbjct: 761 EADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAA 820
Query: 809 LLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITN 868
L+IN +AAIS+G+VPL AVQLLWVNLIMDTLGALALATE PT+ L+ R PVGR E LITN
Sbjct: 821 LVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNELLKRKPVGRTEALITN 880
Query: 869 IMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFN 928
+MWRNL+VQ+LYQ+ VLL+L FKG SI + E VK+T+IFN FVL Q+FNEFN
Sbjct: 881 VMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKE-------VKDTLIFNTFVLCQVFNEFN 933
Query: 929 ARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLF 988
AR+ ++ NVF G+ +N LF+GII IT VLQ+I++EFL KF TV+L+ W I +
Sbjct: 934 AREMEKKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGWQWGTCIALASL 993
Query: 989 SWPLAVLGKMIPVPKTPLAVYFVRP 1013
SWP+ K IPV +TP YF P
Sbjct: 994 SWPIGFFTKFIPVSETPFLSYFKNP 1018
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/922 (56%), Positives = 659/922 (71%), Gaps = 25/922 (2%)
Query: 96 GLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVA 155
GL LK+N GI+ + ++ RR++FGSNTY + + +F+ EA++DLT++IL+
Sbjct: 108 GLVSALKSNTRLGINEEGDEIQRRRSTFGSNTYTRQPSKGLFHFVVEAFKDLTILILLGC 167
Query: 156 AIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEA 215
A SL GIK G++EGWYDG SI AVFLV+ V+A+S++RQ+ QF L+K NI+++
Sbjct: 168 ATLSLGFGIKEHGLKEGWYDGGSIFVAVFLVVAVSAVSNFRQNRQFDKLSKVSSNIKIDV 227
Query: 216 MRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKD-HK 274
+R G+ +ISIFD+VVG+IV L IGDQVPADGV V GH L +DESSMTGES V
Sbjct: 228 VRNGRRQEISIFDIVVGDIVCLNIGDQVPADGVFVEGHLLHVDESSMTGESDHVEVSLTG 287
Query: 275 TPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVG 334
FL SG K+ADG G M VT VG+NT WG +M+ IS D E+TPLQ RL+ + + IG VG
Sbjct: 288 NTFLFSGTKIADGFGKMAVTSVGMNTAWGQMMSHISRDTNEQTPLQSRLDKLTSSIGKVG 347
Query: 335 LAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTI 394
L VAFLVL VLL+R+FTG T E G+ + G+T+ SD +IV A VTI
Sbjct: 348 LLVAFLVLLVLLIRYFTGTTKDESGNREY-NGKTTKSD------EIVNAVVKMVAAAVTI 400
Query: 395 VVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMT 454
+VVA+PEGLPLAVTLTLAYSM++MM D A+VR+LSACETMGSAT IC+DKTGTLTLN+M
Sbjct: 401 IVVAIPEGLPLAVTLTLAYSMKRMMKDNAMVRKLSACETMGSATVICTDKTGTLTLNQMK 460
Query: 455 VVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAI 514
V + + G + +S + V+ L +G+A NTTG+VF K G E SGSPTEKAI
Sbjct: 461 VTDFWFGLE----SGKASSVSQRVVELFHQGVAMNTTGSVFKAKAGTEYEFSGSPTEKAI 516
Query: 515 LSWAVK-LGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKR--INSEVHV-HWKGAAEMIL 570
LSWAV+ L M ++V E V+HV FNSEKKR GV +K+ +N+E +V HWKGAAE IL
Sbjct: 517 LSWAVEELEMGMEKVIEEHDVVHVEGFNSEKKRSGVLMKKKGVNTENNVVHWKGAAEKIL 576
Query: 571 ASCTKYLDTDGQLQSIDGDEDF-FKAAVDEMAARSLRCVAIAY-RFILDKWTLPEEELIL 628
A C+ + D G ++ + D+ F+ + MAA+SLRC+A AY D L EE+L L
Sbjct: 577 AMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAAKSLRCIAFAYSEDNEDNKKLKEEKLSL 636
Query: 629 LAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNI 688
L I+GIKDPCRPGVK AV+ C+ AGV ++M+TGDN+ TA+AIA+ECGIL + E N +
Sbjct: 637 LGIIGIKDPCRPGVKKAVEDCQFAGVNIKMITGDNIFTARAIAVECGILTPEDEMNSEAV 696
Query: 689 IEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALH 748
+EG+ FR + +ER + + I VM RSSP DKLL+V+ L++ G VVAVTGDGTNDAPAL
Sbjct: 697 LEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAPALK 756
Query: 749 EADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAA 808
EADIGL+MGIQGTEVAKE+SDI+ILDDNFASV V++WGR V+ NIQKFIQFQLTVNVAA
Sbjct: 757 EADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAA 816
Query: 809 LLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITN 868
L+IN VAA+S+GDVPL AVQLLWVNLIMDTLGALALATE PT+ LM + P+GR PLITN
Sbjct: 817 LVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPTNDLMKKKPIGRVAPLITN 876
Query: 869 IMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFN 928
IMWRNL+ QA YQ++VLLVL F+G SI ++ VKNT+IFN FVL Q+FNEFN
Sbjct: 877 IMWRNLLAQAFYQISVLLVLQFRGRSIFNV-------TEKVKNTLIFNTFVLCQVFNEFN 929
Query: 929 ARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLF 988
AR ++ NVF G+ KN LF+GII +T VLQ++++EFL +F T +L+ W I I
Sbjct: 930 ARSLEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLGQWGVCIAIAAA 989
Query: 989 SWPLAVLGKMIPVPKTPLAVYF 1010
SWP+ L K +PVP+ Y
Sbjct: 990 SWPIGWLVKSVPVPERHFFSYL 1011
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/1021 (47%), Positives = 645/1021 (63%), Gaps = 79/1021 (7%)
Query: 30 DDVSSDPFDIAQAKHVPVASLKRWRQA--SLVLNASRRFRYTLDLKKE----------EE 77
D + FD+ AK+ + +RWRQA ++V N RRFR+ DL + +E
Sbjct: 5 DRYLQEHFDVP-AKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRSTQE 63
Query: 78 KEKRRRMIRAHAQVIR---------------------VKGLSELLKTNLEKGISGDDTDL 116
K + ++ A + V G+S+ ++++ + GI +DL
Sbjct: 64 KIRVALYVQQAALIFSDDELALITSKHDSKALKMHGGVDGISKKVRSSFDHGICA--SDL 121
Query: 117 SNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDG 176
R+N +G N Y K RSF F+W+A+QD+TLIIL+V A+ S+A+G+ TEG +G YDG
Sbjct: 122 DTRQNIYGVNRYAEKPSRSFWMFVWDAFQDMTLIILMVCALLSVAVGLATEGWPKGMYDG 181
Query: 177 ASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVP 236
I ++FLV++VTA+SDY+QSLQF+ L+ EK+ I + R G+ KISI+D+VVG+IV
Sbjct: 182 LGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIFIHVTRDGRRQKISIYDLVVGDIVH 241
Query: 237 LRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGV 296
L IGDQVPADG+ + G+SL IDESS++GES V PF+++G KV DG M+VT V
Sbjct: 242 LSIGDQVPADGLYIHGYSLLIDESSLSGESDPVYVSQDKPFILAGTKVQDGSAKMIVTAV 301
Query: 297 GINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTK 356
G+ TEWG LM+++SE +ETPLQV+LNGVAT IG +GL A L VLLVRF
Sbjct: 302 GMRTEWGKLMSTLSEGGEDETPLQVKLNGVATVIGKIGLVFAILTFLVLLVRFLID---- 357
Query: 357 EDGSSAFVKGRTSVSDAVDGVIKIVT----IATNSRAIQVTIVVVAVPEGLPLAVTLTLA 412
KG T G++K + N A VTI+VVAVPEGLPLAVTL+LA
Sbjct: 358 --------KGMTV------GLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLAVTLSLA 403
Query: 413 YSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGR--KKINPPDD 470
++M+K+M DKALVR LSACETMGSA TIC+DKTGTLT N M V + +I K +
Sbjct: 404 FAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNYMVVDKIWISEVSKSVTSNTI 463
Query: 471 SSQMHSIV----IYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFD 526
S +++S+V + LL +GI +NT+ V KDG+ V G+PTE+AIL + + L D
Sbjct: 464 SGELNSVVSSRTLSLLLQGIFENTSAEVVKEKDGKQT-VLGTPTERAILEFGLGLEGVHD 522
Query: 527 RVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSI 586
S T + V PFNS KK+ V + + KGA+E+IL C +D DG +
Sbjct: 523 AEYSACTKVKVEPFNSVKKKMAVLISLPSGTSRWFCKGASEIILQMCDMMVDGDGNAIPL 582
Query: 587 -DGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTL----PEEELILLAIVGIKDPCRPG 641
+ ++ A+ +LR + +AY+ + D P L+AI GIKDP RPG
Sbjct: 583 SEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKDPVRPG 642
Query: 642 VKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKE 701
VKDAVK C AG+ VRMVTGDN+ TAKAIA ECGIL D A IEG F + S +E
Sbjct: 643 VKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVA-----IEGPEFHSKSPEE 697
Query: 702 REKVAQEITVMGRSSPNDKLLLVQALRKGGD-VVAVTGDGTNDAPALHEADIGLAMGIQG 760
+ I VM RS P DK LV LR D VV+VTGDGTNDAPALHEADIGLAMGI G
Sbjct: 698 MRDLIPNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAG 757
Query: 761 TEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSG 820
TEVAKE++D+I+LDDNF +++ V RWGR+V+ NIQKF+QFQLTVN+ AL+IN V+A +G
Sbjct: 758 TEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITG 817
Query: 821 DVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALY 880
PL AVQLLWVN+IMDTLGALALATEPP D +M R PV + E IT +MWRN++ Q+LY
Sbjct: 818 SAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKVMWRNIMGQSLY 877
Query: 881 QVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTG 940
Q+ VL L F G S+L+++G + + NT+IFN+FV Q+FNE N+R+ +INVF G
Sbjct: 878 QLFVLGALMFGGESLLNIKG---ADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRG 934
Query: 941 VTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIP 1000
+ N++F+ +I T Q++IIEFLG F TV L+W+ WL S+G+G S + V+ K IP
Sbjct: 935 IISNWIFIAVIAATVAFQVVIIEFLGTFASTVPLNWQHWLLSVGLGSISLIVGVILKCIP 994
Query: 1001 V 1001
V
Sbjct: 995 V 995
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/1026 (46%), Positives = 653/1026 (63%), Gaps = 89/1026 (8%)
Query: 37 FDIAQAKHVPVASLKRWRQA-SLVLNASRRFRYTLDLKKEEEKEKRR------------- 82
F++A +K+ + + +RWR + LV N +RRFR +L K E EK+R
Sbjct: 8 FEVA-SKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQEKIRVVFYV 66
Query: 83 -----------------------------------RMIRAH-----AQVIRVKGLSELLK 102
M+R H ++ +G+++ +
Sbjct: 67 QKAAFQFIDAGARPEYKLTDEVKKAGFYVEADELASMVRNHDTKSLTKIGGPEGIAQKVS 126
Query: 103 TNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLAL 162
+L +G+ ++L R +G N Y K RSFL F+WEA QD+TLIIL+V A+ S+ +
Sbjct: 127 VSLAEGVR--SSELHIREKIYGENRYTEKPARSFLTFVWEALQDITLIILMVCAVVSIGV 184
Query: 163 GIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAV 222
G+ TEG +G YDG I ++ LV++VTAISDY+QSLQF++L++EK+ I ++ R G
Sbjct: 185 GVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQSLQFRDLDREKKKIIIQVTRDGSRQ 244
Query: 223 KISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGC 282
++SI D+VVG++V L IGDQVPADG+ ++G++L IDESS++GES+ + + PFL+SG
Sbjct: 245 EVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNKEKPFLLSGT 304
Query: 283 KVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVL 342
KV +G M+VT VG+ TEWG LM ++SE +ETPLQV+LNGVAT IG +GL A L
Sbjct: 305 KVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGEDETPLQVKLNGVATIIGKIGLGFAVLTF 364
Query: 343 AVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEG 402
VL +RF T G + + D + + + AI VTI+VVAVPEG
Sbjct: 365 VVLCIRFVVEKATA---------GSITEWSSEDALTLL-----DYFAIAVTIIVVAVPEG 410
Query: 403 LPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGR 462
LPLAVTL+LA++M+++M+D+ALVR L+ACETMGS+T IC+DKTGTLT N M V + +I
Sbjct: 411 LPLAVTLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICE 470
Query: 463 KKINPPDDSSQMH--SIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVK 520
+++ Q++ V +L + I QNT V K+G+ ++ GSPTE+AIL + +
Sbjct: 471 NIKERQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKT-QILGSPTERAILEFGLL 529
Query: 521 LGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTD 580
LG D R E +L + PFNS+KK+ V +V KGA+E++L C K +D++
Sbjct: 530 LGGDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGASEIVLKMCEKVVDSN 589
Query: 581 GQLQSIDGDEDFFKA---AVDEMAARSLRCVAIAYRFILD--KWTLPEEELILLAIVGIK 635
G+ S+ E+ + ++ A+ +LR + + Y + + + LP L+A+VGIK
Sbjct: 590 GE--SVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGDLPNGGYTLVAVVGIK 647
Query: 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFR 695
DP RPGV++AV+ C+ AG+ VRMVTGDN+ TAKAIA ECGIL + A IEG FR
Sbjct: 648 DPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVA-----IEGSDFR 702
Query: 696 ALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA 755
L E + +I VM RS P DK LV LRK G+VVAVTGDGTNDAPALHEADIGLA
Sbjct: 703 NLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRKMGEVVAVTGDGTNDAPALHEADIGLA 762
Query: 756 MGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVA 815
MGI GTEVAKEN+D+II+DDNFA++V V +WGR+V+ NIQKF+QFQLTVNV AL+IN V+
Sbjct: 763 MGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVS 822
Query: 816 AISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLI 875
A +G PL AVQLLWVN+IMDTLGALALATEPP + LM R P+GR IT MWRN+I
Sbjct: 823 ACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRAMWRNII 882
Query: 876 VQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEI 935
Q++YQ+ VL +LNF G IL+L G ++ V NT+IFN+FV Q+FNE N+R+ ++I
Sbjct: 883 GQSIYQLIVLGILNFAGKQILNLNGP---DSTIVLNTIIFNSFVFCQVFNEVNSREIEKI 939
Query: 936 NVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVL 995
NVF G+ K+++F+ ++ T Q+II+EFLG F TV L W+ WL I IG S LAV
Sbjct: 940 NVFEGMFKSWVFVAVMTATVGFQVIIVEFLGAFASTVPLSWQHWLLCILIGSVSMILAVG 999
Query: 996 GKMIPV 1001
K IPV
Sbjct: 1000 LKCIPV 1005
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/1033 (47%), Positives = 647/1033 (62%), Gaps = 89/1033 (8%)
Query: 34 SDPFDIAQAKHVPVASLKRWRQ-ASLVLNASRRFRYTLDLKKEEE--------KEKRRRM 84
++ FD+ +AKH L++WR +V N RRFR+T +L K E +EK R
Sbjct: 6 NENFDV-KAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQEKLRIA 64
Query: 85 I---RAHAQVIR------------------------------------------VKGLSE 99
+ +A Q I V GL+
Sbjct: 65 VLVSKAAFQFISGVSPSDYTVPEDVKAAGFEICADELGSIVESHDVKKLKFHGGVDGLAG 124
Query: 100 LLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIAS 159
LK + G+S + LS R+ FG N + + R F F+WEA QD+TL+IL V A S
Sbjct: 125 KLKASPTDGLSTEAAQLSQRQELFGINKFAESEMRGFWVFVWEALQDMTLMILGVCAFVS 184
Query: 160 LALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGG 219
L +GI TEG +G +DG IA ++ LV+ VTA SDYRQSLQF++L+KEK+ I ++ R G
Sbjct: 185 LIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDYRQSLQFRDLDKEKKKITVQVTRNG 244
Query: 220 KAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLM 279
K+SI+D++ G+IV L IGDQVPADG+ ++G S+ IDESS+TGES+ V + + PFLM
Sbjct: 245 FRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVNAQNPFLM 304
Query: 280 SGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAF 339
SG KV DG MM+T VG+ T+WG LMA+++E +ETPLQV+LNGVAT IG +GL A
Sbjct: 305 SGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDETPLQVKLNGVATIIGKIGLFFAV 364
Query: 340 LVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAV 399
+ AVL+ F + G+ G D ++++ + I V AV
Sbjct: 365 VTFAVLVQGMFMRKLST--GTHWVWSG--------DEALELLEYFAIAVTIVVV----AV 410
Query: 400 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAF 459
PEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSATTICSDKTGTLT N MTVV++
Sbjct: 411 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSC 470
Query: 460 IGRKKINPPDDSSQMHSIV----IYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAIL 515
I + + S + S + + LL + I NT G V V K G+ E+ G+PTE AIL
Sbjct: 471 ICMNVQDVANKGSSLQSEIPESAVKLLIQSIFNNTGGEVVVNKHGKT-ELLGTPTETAIL 529
Query: 516 SWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRIN-SEVHVHWKGAAEMILASCT 574
+ LG KF R V+ V PFNS KKR GV ++ + H KGA+E++LA+C
Sbjct: 530 ELGLSLGGKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACD 589
Query: 575 KYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKWT----LPEEELILL 629
K +++ G++ +D + + ++E A +LR + +AY I ++ +P +
Sbjct: 590 KVVNSSGEVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIPASGFTCV 649
Query: 630 AIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNII 689
IVGIKDP RPGVK++V+LCR AG+ VRMVTGDN+ TAKAIA ECGIL D A I
Sbjct: 650 GIVGIKDPVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIA-----I 704
Query: 690 EGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGD-VVAVTGDGTNDAPALH 748
EG VFR + +E ++ +I VM RSSP DK LV+ LR D VVAVTGDGTNDAPALH
Sbjct: 705 EGPVFREKNQEELLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALH 764
Query: 749 EADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAA 808
EADIGLAMGI GTEVAKE++D+IILDDNF+++V V +WGRSV+ NIQKF+QFQLTVNV A
Sbjct: 765 EADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVA 824
Query: 809 LLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITN 868
L++N +A +G PL AVQLLWVN+IMDTLGALALATEPP D LM RLPVGR+ ITN
Sbjct: 825 LVVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGNFITN 884
Query: 869 IMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFN 928
MWRN++ QA+YQ V+ +L KG ++ L+G ++ + NT+IFN FV Q+FNE +
Sbjct: 885 AMWRNILGQAVYQFIVIWILQAKGKAMFGLDGP---DSTLMLNTLIFNCFVFCQVFNEIS 941
Query: 929 ARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLF 988
+R+ +EI+VF G+ NY+F+ +IG T QIIIIEFLG F T L W+ SI IG
Sbjct: 942 SREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTITQWIFSIFIGFL 1001
Query: 989 SWPLAVLGKMIPV 1001
P+A K IPV
Sbjct: 1002 GMPIAAGLKTIPV 1014
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/1025 (45%), Positives = 646/1025 (63%), Gaps = 91/1025 (8%)
Query: 41 QAKHVPVASLKRWRQA-SLVLNASRRFRYTLDLKKEEEKEKRRRMIRAH----------- 88
+AK+ + + +RWR + S+V N +RRFR DL K + E ++ I+
Sbjct: 11 EAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQEKIRVAFFVQKAA 70
Query: 89 ------------------------------AQVIR------------VKGLSELLKTNLE 106
A ++R V+ L++ + +L
Sbjct: 71 LHFIDAAARPEYKLTDEVKKAGFSIEADELASMVRKNDTKSLAQKGGVEELAKKVSVSLS 130
Query: 107 KGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKT 166
+GI + + R FG N Y K RSFL F+WEA D+TLIIL+V A+ S+ +G+ T
Sbjct: 131 EGIRSSEVPI--REKIFGENRYTEKPARSFLMFVWEALHDITLIILMVCAVVSIGVGVAT 188
Query: 167 EGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISI 226
EG G YDG I ++ LV++VTAISDY+QSLQF++L++EK+ I ++ R G +ISI
Sbjct: 189 EGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDREKKKIIVQVTRDGSRQEISI 248
Query: 227 FDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVAD 286
D+VVG++V L IGDQVPADG+ ++G++L IDESS++GES+ + + PFL+SG KV +
Sbjct: 249 HDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNKEKPFLLSGTKVQN 308
Query: 287 GVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLL 346
G M+VT VG+ TEWG LM ++ + +ETPLQV+LNGVAT IG +GL+ A L VL
Sbjct: 309 GSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGVATIIGKIGLSFAVLTFVVLC 368
Query: 347 VRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLA 406
+RF T S +F S DA+ + AI VTI+VVAVPEGLPLA
Sbjct: 369 IRFVLDKAT----SGSFTNW--SSEDAL--------TLLDYFAISVTIIVVAVPEGLPLA 414
Query: 407 VTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIG----- 461
VTL+LA++M+K+M+D+ALVR L+ACETMGS+T IC+DKTGTLT N M V + +I
Sbjct: 415 VTLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQE 474
Query: 462 RKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKL 521
R++ + ++ V L +GI QNT V KDG ++ GSPTE+AIL + + L
Sbjct: 475 RQEGSKESFELELSEEVQSTLLQGIFQNTGSEVVKDKDGNT-QILGSPTERAILEFGLLL 533
Query: 522 GMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDG 581
G F+ R E +L + PFNS+KK+ V + KGA+E++L C +D++G
Sbjct: 534 GGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFCKGASEIVLKMCENVVDSNG 593
Query: 582 QLQSIDGDEDFFKAAVD---EMAARSLRCVAIAYRFILDKWT--LPEEELILLAIVGIKD 636
+ S+ E+ + D A+ +LR + + Y+ + + + LP+ ++A+VGIKD
Sbjct: 594 E--SVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGELPDGGYTMVAVVGIKD 651
Query: 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRA 696
P RPGV++AV+ C+ AG+ VRMVTGDN+ TAKAIA ECGI A IEG FR
Sbjct: 652 PVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEGGLA-----IEGSEFRD 706
Query: 697 LSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM 756
LS E + +I VM RS P DK LV LRK G+VVAVTGDGTNDAPALHEADIGLAM
Sbjct: 707 LSPHEMRAIIPKIQVMARSLPLDKHTLVSNLRKIGEVVAVTGDGTNDAPALHEADIGLAM 766
Query: 757 GIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAA 816
GI GTEVAKEN+D+II+DDNF ++V V RWGR+V+ NIQKF+QFQLTVNV AL+IN V+A
Sbjct: 767 GIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALIINFVSA 826
Query: 817 ISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIV 876
+G PL AVQLLWVN+IMDTLGALALATEPP + LM R P+ R IT MWRN+
Sbjct: 827 CITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIARTASFITKTMWRNIAG 886
Query: 877 QALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEIN 936
Q++YQ+ VL +LNF G S+L L+G ++ V NT+IFN+FV Q+FNE N+R+ ++IN
Sbjct: 887 QSVYQLIVLGILNFAGKSLLKLDGP---DSTAVLNTVIFNSFVFCQVFNEINSREIEKIN 943
Query: 937 VFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLG 996
VF G+ +++F ++ +T V Q+II+EFLG F TV L W+ WL SI IG + +AV+
Sbjct: 944 VFKGMFNSWVFTWVMTVTVVFQVIIVEFLGAFASTVPLSWQHWLLSILIGSLNMIVAVIL 1003
Query: 997 KMIPV 1001
K +PV
Sbjct: 1004 KCVPV 1008
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/1031 (48%), Positives = 649/1031 (62%), Gaps = 90/1031 (8%)
Query: 37 FDIAQAKHVPVASLKRWRQ-ASLVLNASRRFRYTLDLKKEEE--------KEKRRRMI-- 85
FD+ +AKH L++WR S+V N RRFR+T +L K E +EK R +
Sbjct: 9 FDV-KAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQEKLRIAVLV 67
Query: 86 -RAHAQVIR------------------------------------------VKGLSELLK 102
+A Q I V GLS LK
Sbjct: 68 SKAAFQFISGVSPSDYKVPEEVKAAGFDICADELGSIVEGHDVKKLKFHGGVDGLSGKLK 127
Query: 103 TNLEKGIS-GDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLA 161
G+S G+ LS R+ FG N + + RSF F+WEA QD+TL+IL V A SL
Sbjct: 128 ACPNAGLSTGEPEQLSKRQELFGINKFAESELRSFWVFVWEALQDMTLMILGVCAFVSLI 187
Query: 162 LGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKA 221
+GI TEG +G +DG I ++ LV+ VTA SDYRQSLQF++L+KEK+ I ++ R G
Sbjct: 188 VGIATEGWPQGSHDGLGIVASILLVVFVTATSDYRQSLQFRDLDKEKKKITVQVTRNGFR 247
Query: 222 VKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSG 281
K+SI+D++ G++V L IGDQVPADG+ ++G S+ IDESS+TGES+ V + PFL+SG
Sbjct: 248 QKMSIYDLLPGDVVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVTAQNPFLLSG 307
Query: 282 CKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLV 341
KV DG M+VT VG+ T+WG LMA++SE +ETPLQV+LNGVAT IG +GL+ A +
Sbjct: 308 TKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLSFAIVT 367
Query: 342 LAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPE 401
AVL+ F + G + G DA++ AI VTIVVVAVPE
Sbjct: 368 FAVLVQGMFMRKLSL--GPHWWWSG----DDALE--------LLEYFAIAVTIVVVAVPE 413
Query: 402 GLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIG 461
GLPLAVTL+LA++M+KMM DKALVR L+ACETMGSATTICSDKTGTLT N MTVV++ I
Sbjct: 414 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCIC 473
Query: 462 RKKINPPDDSSQMHSIV----IYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSW 517
+ SS + S + + LL + I NT G V V + G+ E+ G+PTE AIL
Sbjct: 474 MNVQDVASKSSSLQSDIPEAALKLLLQLIFNNTGGEVVVNERGKT-EILGTPTETAILEL 532
Query: 518 AVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRIN-SEVHVHWKGAAEMILASCTKY 576
+ LG KF R V+ V PFNS KKR GV ++ + H KGA+E++LA+C K
Sbjct: 533 GLSLGGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVLAACDKV 592
Query: 577 LDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKWT----LPEEELILLAI 631
+++ G++ +D + F +DE A +LR + +AY I ++ +PE+ + I
Sbjct: 593 INSSGEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSADEGIPEKGFTCIGI 652
Query: 632 VGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEG 691
VGIKDP RPGV+++V+LCR AG+ VRMVTGDN+ TAKAIA ECGIL D A IEG
Sbjct: 653 VGIKDPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILTDDGIA-----IEG 707
Query: 692 KVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGD-VVAVTGDGTNDAPALHEA 750
VFR + +E ++ +I VM RSSP DK LV+ LR D VVAVTGDGTNDAPALHEA
Sbjct: 708 PVFREKNQEEMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEA 767
Query: 751 DIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALL 810
DIGLAMGI GTEVAKE +D+IILDDNF+++V V +WGRSV+ NIQKF+QFQLTVNV AL+
Sbjct: 768 DIGLAMGIAGTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 827
Query: 811 INVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIM 870
+N +A +G PL AVQLLWVN+IMDTLGALALATEPP + LM R+PVGR+ ITN M
Sbjct: 828 VNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNNELMKRMPVGRRGNFITNAM 887
Query: 871 WRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNAR 930
WRN++ QA+YQ ++ +L KG S+ L G ++ V NT+IFN FV Q+FNE ++R
Sbjct: 888 WRNILGQAVYQFIIIWILQAKGKSMFGLVG---SDSTLVLNTLIFNCFVFCQVFNEVSSR 944
Query: 931 KPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSW 990
+ +EI+VF G+ NY+F+ +IG T QIIIIEFLG F T L W SI +G
Sbjct: 945 EMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTIVQWFFSIFVGFLGM 1004
Query: 991 PLAVLGKMIPV 1001
P+A K IPV
Sbjct: 1005 PIAAGLKKIPV 1015
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1023 | ||||||
| 449491812 | 1089 | PREDICTED: LOW QUALITY PROTEIN: calcium- | 0.990 | 0.930 | 0.736 | 0.0 | |
| 449447978 | 1089 | PREDICTED: calcium-transporting ATPase 9 | 0.990 | 0.930 | 0.735 | 0.0 | |
| 359483154 | 1075 | PREDICTED: calcium-transporting ATPase 9 | 0.972 | 0.925 | 0.745 | 0.0 | |
| 298204803 | 1152 | unnamed protein product [Vitis vinifera] | 0.972 | 0.863 | 0.738 | 0.0 | |
| 224097462 | 1094 | autoinhibited calcium ATPase [Populus tr | 0.988 | 0.924 | 0.730 | 0.0 | |
| 255546632 | 1017 | cation-transporting atpase plant, putati | 0.956 | 0.962 | 0.778 | 0.0 | |
| 356547482 | 1092 | PREDICTED: calcium-transporting ATPase 9 | 0.967 | 0.906 | 0.736 | 0.0 | |
| 356557197 | 1086 | PREDICTED: calcium-transporting ATPase 9 | 0.947 | 0.892 | 0.746 | 0.0 | |
| 356523453 | 1088 | PREDICTED: calcium-transporting ATPase 9 | 0.949 | 0.892 | 0.756 | 0.0 | |
| 356521847 | 1086 | PREDICTED: calcium-transporting ATPase 9 | 0.964 | 0.908 | 0.740 | 0.0 |
| >gi|449491812|ref|XP_004159010.1| PREDICTED: LOW QUALITY PROTEIN: calcium-transporting ATPase 9, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1600 bits (4143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 802/1089 (73%), Positives = 907/1089 (83%), Gaps = 76/1089 (6%)
Query: 2 STSSVNGLLSPR--------DVEVGPSNDGSDVVLEDDVSSDPFDIAQAKHVPVASLKRW 53
S+SS NGLL + DVE G S+ + E++ SDPFDI K+VP+ LKRW
Sbjct: 6 SSSSGNGLLQLKVSTSGRHHDVESGLSSGKNIDEEEEEAVSDPFDIDNTKNVPLEILKRW 65
Query: 54 RQASLVLNASRRFRYTLDLKKEEEKEKRRRMIRAHAQVIR-------------------- 93
RQA+LVLNASRRFRYTLDLKKEEEKE+RRRMIRAHAQVIR
Sbjct: 66 RQAALVLNASRRFRYTLDLKKEEEKEQRRRMIRAHAQVIRAALLFKLAGEQQIGSSASPP 125
Query: 94 ------------------------------VKGLSELLKTNLEKGISGDDTDLSNRRNSF 123
VKGLS LLKT+ EKGISGD+TDL RRN+F
Sbjct: 126 LSGGDYSISLEQLASLTRDQNLSSLQQHGGVKGLSNLLKTSTEKGISGDETDLLKRRNAF 185
Query: 124 GSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAV 183
GSNTYP KKGRSFL FLWEAWQDLTLIILI+AA+ASLALGIKTEGVEEGWYDG SIAFAV
Sbjct: 186 GSNTYPRKKGRSFLKFLWEAWQDLTLIILIIAAVASLALGIKTEGVEEGWYDGGSIAFAV 245
Query: 184 FLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQV 243
FLVI+VTA+SDYRQSLQFQNLN+EK+NIQ+E +R G+ +K+SIFD+VVG++VPL+IGDQ+
Sbjct: 246 FLVIMVTAVSDYRQSLQFQNLNEEKQNIQVEILRDGRTLKVSIFDLVVGDVVPLKIGDQI 305
Query: 244 PADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWG 303
PADG+L+TGHSLAIDESSMTGESKIVRKD K PFLMSGCKVADGVGTMMVT VGINTEWG
Sbjct: 306 PADGILITGHSLAIDESSMTGESKIVRKDQKAPFLMSGCKVADGVGTMMVTAVGINTEWG 365
Query: 304 LLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAF 363
LLMASISED GEETPLQVRLNGVATFIGIVGLAVA VLAVLL R+FTG+T +G+ F
Sbjct: 366 LLMASISEDTGEETPLQVRLNGVATFIGIVGLAVAVSVLAVLLGRYFTGNTHDANGNPQF 425
Query: 364 VKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKA 423
+G TS+ DAV+GVIKIVT+A TIVVVAVPEGLPLAVTLTLAYSMRKMMADKA
Sbjct: 426 QRGHTSLGDAVNGVIKIVTVAV-------TIVVVAVPEGLPLAVTLTLAYSMRKMMADKA 478
Query: 424 LVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLS 483
LVRRLSACETMGSATTICSDKTGTLTLN+MTVVE +GRK INPPDD Q++S V+ LL
Sbjct: 479 LVRRLSACETMGSATTICSDKTGTLTLNQMTVVEVCVGRKMINPPDDPLQLNSSVLSLLH 538
Query: 484 EGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSE 543
EG+AQN+TGNVFV KDG +EVSGSPTEKAILSWAVKLGMKFD ++SE+ VLHV PFNSE
Sbjct: 539 EGVAQNSTGNVFVAKDGGGIEVSGSPTEKAILSWAVKLGMKFDDIKSESKVLHVVPFNSE 598
Query: 544 KKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAAR 603
KKRGGVA+KR NSEV +HWKGAAEM+L+SCTK++D++G++ S++ +ED+FK A+ +MAAR
Sbjct: 599 KKRGGVAIKRANSEVCIHWKGAAEMVLSSCTKFMDSNGEMHSLEDNEDYFKTAISDMAAR 658
Query: 604 SLRCVAIAYRFI-----------LDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDA 652
SLRCVAIAY+ LD+W LP ++L+LLAIVGIKDPCR GVK+AVK+C DA
Sbjct: 659 SLRCVAIAYKSYQLEKIPIDEQRLDQWDLPTDDLVLLAIVGIKDPCRDGVKEAVKVCTDA 718
Query: 653 GVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712
GVKVRMVTGDN+QTAKAIA+ECGIL ++ +A++P +IEGK FR LS+KERE+VAQ+ITVM
Sbjct: 719 GVKVRMVTGDNIQTAKAIAVECGILNANEDASEPTVIEGKTFRVLSEKEREQVAQKITVM 778
Query: 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIII 772
GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL+MGIQGTEVAKE+SDI+I
Sbjct: 779 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVI 838
Query: 773 LDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWV 832
LDDNFASVVKVVRWGRSV+ANIQKFIQFQLTVNVAAL+INVVAA+SSGDVPLN VQLLWV
Sbjct: 839 LDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNTVQLLWV 898
Query: 833 NLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKG 892
NLIMDTLGALALATEPPTDHLMHR PVGR+EPLITNIMWRNLIVQALYQV VLLVLNF
Sbjct: 899 NLIMDTLGALALATEPPTDHLMHRSPVGRREPLITNIMWRNLIVQALYQVAVLLVLNFYA 958
Query: 893 TSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIG 952
IL L+ + + HA VKNT+IFNAFVL QIFNEFNARKPDE+NVF+GVTKNYLFMGI+G
Sbjct: 959 IDILQLDNDSKDHAFTVKNTVIFNAFVLCQIFNEFNARKPDEMNVFSGVTKNYLFMGIVG 1018
Query: 953 ITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFVR 1012
T VLQI+I+EF GKFT TVKLD K WL I L SWPLAV+GK+IPVP+TPLA YF +
Sbjct: 1019 STFVLQILIVEFXGKFTSTVKLDGKEWLICFAIALVSWPLAVVGKLIPVPETPLAKYFTK 1078
Query: 1013 PFQRCINAR 1021
P QRC +R
Sbjct: 1079 PVQRCRRSR 1087
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449447978|ref|XP_004141743.1| PREDICTED: calcium-transporting ATPase 9, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1598 bits (4137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 801/1089 (73%), Positives = 906/1089 (83%), Gaps = 76/1089 (6%)
Query: 2 STSSVNGLLSPR--------DVEVGPSNDGSDVVLEDDVSSDPFDIAQAKHVPVASLKRW 53
S+SS NGLL + DVE G S+ + E++ SDPFDI K+VP+ LKRW
Sbjct: 6 SSSSGNGLLQLKVSTSGRHHDVESGLSSGKNIDEEEEEAVSDPFDIDNTKNVPLEILKRW 65
Query: 54 RQASLVLNASRRFRYTLDLKKEEEKEKRRRMIRAHAQVIR-------------------- 93
RQA+LVLNASRRFRYTLDLKKEEEKE+RRRMIRAHAQVIR
Sbjct: 66 RQAALVLNASRRFRYTLDLKKEEEKEQRRRMIRAHAQVIRAALLFKLAGEQQIGSSASPP 125
Query: 94 ------------------------------VKGLSELLKTNLEKGISGDDTDLSNRRNSF 123
VKGLS LLKT+ EKGISGD+TDL NRRN+F
Sbjct: 126 LSGGDYSISLEQLASLTRDQNLSSLQQHGGVKGLSNLLKTSTEKGISGDETDLLNRRNAF 185
Query: 124 GSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAV 183
GSN YP KKGRSFL FLWEAWQDLTLIILI+AA+ASLALGIKTEGVEEGWYDG SI FAV
Sbjct: 186 GSNKYPRKKGRSFLKFLWEAWQDLTLIILIIAAVASLALGIKTEGVEEGWYDGESIGFAV 245
Query: 184 FLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQV 243
FLVI+VTA+SDYRQSLQFQNLN+EK+NIQ+E +R G+ +K+SIFD+VVG++VPL+IGDQ+
Sbjct: 246 FLVIMVTAVSDYRQSLQFQNLNEEKQNIQVEILRDGRTLKVSIFDLVVGDVVPLKIGDQI 305
Query: 244 PADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWG 303
PADG+L+TGHSLAIDESSMTGESKIVRKD K PFLMSGCKVADGVGTMMVT VGINTEWG
Sbjct: 306 PADGILITGHSLAIDESSMTGESKIVRKDQKAPFLMSGCKVADGVGTMMVTAVGINTEWG 365
Query: 304 LLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAF 363
LLMASISED GEETPLQVRLNGVATFIGIVGLAVA VLAVLL R+FTG+T +G+ F
Sbjct: 366 LLMASISEDTGEETPLQVRLNGVATFIGIVGLAVAVSVLAVLLGRYFTGNTHDANGNPQF 425
Query: 364 VKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKA 423
+G TS+ DAV+GVIKIVT+A TIVVVAVPEGLPLAVTLTLAYSMRKMMADKA
Sbjct: 426 QRGHTSLGDAVNGVIKIVTVAV-------TIVVVAVPEGLPLAVTLTLAYSMRKMMADKA 478
Query: 424 LVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLS 483
LVRRLSACETMGSATTICSDKTGTLTLN+MTVVE +GRK INPPDD Q++S V+ LL
Sbjct: 479 LVRRLSACETMGSATTICSDKTGTLTLNQMTVVEVCVGRKMINPPDDPLQLNSSVLSLLH 538
Query: 484 EGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSE 543
EG+AQN+TGNVFV KDG +EVSGSPTEKAILSWAVKLGMKFD ++SE+ VLHV PFNSE
Sbjct: 539 EGVAQNSTGNVFVAKDGGGIEVSGSPTEKAILSWAVKLGMKFDDIKSESKVLHVVPFNSE 598
Query: 544 KKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAAR 603
KKRGGVA+KR NSEV +HWKGAAEM+L+SCTK++D++G++ S++ +ED+FK A+ +MAAR
Sbjct: 599 KKRGGVAIKRANSEVCIHWKGAAEMVLSSCTKFMDSNGEMHSLEDNEDYFKTAISDMAAR 658
Query: 604 SLRCVAIAYRFI-----------LDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDA 652
SLRCVAIAY+ LD+W LP ++L+LLAIVGIKDPCR GVK+AVK+C DA
Sbjct: 659 SLRCVAIAYKSYQLEKIPIDEQRLDQWDLPTDDLVLLAIVGIKDPCRDGVKEAVKVCTDA 718
Query: 653 GVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712
GVKVRMVTGDN+QTAKAIA+ECGIL ++ +A++P +IEGK FR LS+KERE+VAQ+ITVM
Sbjct: 719 GVKVRMVTGDNIQTAKAIAVECGILNANEDASEPTVIEGKTFRVLSEKEREQVAQKITVM 778
Query: 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIII 772
GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL+MGIQGTEVAKE+SDI+I
Sbjct: 779 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVI 838
Query: 773 LDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWV 832
LDDNFASVVKVVRWGRSV+ANIQKFIQFQLTVNVAAL+INVVAA+SSGDVPLN VQLLWV
Sbjct: 839 LDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNTVQLLWV 898
Query: 833 NLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKG 892
NLIMDTLGALALATEPPTDHLMHR PVGR+EPLITNIMWRNLIVQALYQV VLLVLNF
Sbjct: 899 NLIMDTLGALALATEPPTDHLMHRSPVGRREPLITNIMWRNLIVQALYQVAVLLVLNFYA 958
Query: 893 TSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIG 952
IL L+ + + HA VKNT+IFNAFVL QIFNEFNARKPDE+NVF+GVTKNYLFMGI+G
Sbjct: 959 IDILQLDNDSKDHAFTVKNTVIFNAFVLCQIFNEFNARKPDEMNVFSGVTKNYLFMGIVG 1018
Query: 953 ITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFVR 1012
T VLQI+I+EF GKFT TVKLD K WL I L SWPLAV+GK+IPVP+TPLA YF +
Sbjct: 1019 STFVLQILIVEFAGKFTSTVKLDGKQWLICFAIALVSWPLAVVGKLIPVPETPLAKYFTK 1078
Query: 1013 PFQRCINAR 1021
P QRC +R
Sbjct: 1079 PVQRCRRSR 1087
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359483154|ref|XP_002275074.2| PREDICTED: calcium-transporting ATPase 9, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1586 bits (4107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 798/1071 (74%), Positives = 894/1071 (83%), Gaps = 76/1071 (7%)
Query: 14 DVEVGPSNDGSDVVLEDD--VSSDPFDIAQAKHVPVASLKRWRQASLVLNASRRFRYTLD 71
D+E ++ G V ++D V DPF+IA K+ V +LKRWRQA+LVLNASRRFRYTLD
Sbjct: 6 DMEAASASGGGMVGGDEDEVVYLDPFNIATTKNASVETLKRWRQAALVLNASRRFRYTLD 65
Query: 72 LKKEEEKEKRRRMIRAHAQVIR-------------------------------------- 93
L+KEEEKE+RRRMIRAHAQVIR
Sbjct: 66 LRKEEEKEQRRRMIRAHAQVIRAALLFKLAGEQATIVLGTTVSPPSPVGDYLIGVEQLAS 125
Query: 94 ---------------VKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLN 138
VKGLS+LL+TNLEKG GDD LS RRN FGSNTYP KKGRSFL
Sbjct: 126 MTRDHNFSALQEYGGVKGLSDLLETNLEKGTDGDDASLSKRRNMFGSNTYPQKKGRSFLM 185
Query: 139 FLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQS 198
FLWEAWQDLTLIILIVAA ASLALGIKTEGV+EGWYDG SIAFAVFLVI VTAISDYRQS
Sbjct: 186 FLWEAWQDLTLIILIVAAAASLALGIKTEGVKEGWYDGGSIAFAVFLVIFVTAISDYRQS 245
Query: 199 LQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAID 258
LQFQNLN+EKRNI L+ +RGG+ V+ISIFD+VVG++VPL IGDQVPADG+L+TGHSLAID
Sbjct: 246 LQFQNLNEEKRNIHLKVIRGGRPVEISIFDIVVGDVVPLSIGDQVPADGILITGHSLAID 305
Query: 259 ESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETP 318
ESSMTGESKIV KDHK PFLMSGCKVADGVGTM+VTGVGINTEWGLLMASISED GEETP
Sbjct: 306 ESSMTGESKIVHKDHKAPFLMSGCKVADGVGTMLVTGVGINTEWGLLMASISEDTGEETP 365
Query: 319 LQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVI 378
LQVRLNGVATFIGIVGLAVA VLAVLL+R+FTGHT DG+ F G TS DAVD VI
Sbjct: 366 LQVRLNGVATFIGIVGLAVAVSVLAVLLIRYFTGHTRDSDGTVQFKSGVTSFGDAVDDVI 425
Query: 379 KIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSAT 438
KI+TIA VAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSAT
Sbjct: 426 KIITIAVTIVV-------VAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSAT 478
Query: 439 TICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPK 498
TICSDKTGTLTLN+MTVVEA++GRKKI+PPDDSSQ+H V LL EGIA NT GNVFVPK
Sbjct: 479 TICSDKTGTLTLNKMTVVEAYVGRKKIDPPDDSSQLHPDVSSLLHEGIACNTQGNVFVPK 538
Query: 499 DG--EAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINS 556
G E +E+SGSPTEKAIL+WAVKLGMKFD +R E+++LHVFPFNSEKKRGGVAV+ N
Sbjct: 539 GGGEEKMEISGSPTEKAILAWAVKLGMKFDVIREESSILHVFPFNSEKKRGGVAVQGDN- 597
Query: 557 EVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYR-FI 615
+VH+HWKGAAEM+L SCT+YLD++G LQ + D++FF A+++MAA SLRCVAIAYR F
Sbjct: 598 KVHIHWKGAAEMVLGSCTEYLDSNGCLQPMGEDKEFFSEAINQMAASSLRCVAIAYRTFD 657
Query: 616 LDK----------WTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQ 665
LDK W LPE +L+LL+IVGIKDPCR GV++AV++C +AGVKVRM+TGDNLQ
Sbjct: 658 LDKMPIDEEQRDQWVLPENDLVLLSIVGIKDPCRSGVQNAVRICTNAGVKVRMITGDNLQ 717
Query: 666 TAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQ 725
TAKAIALECGIL S+A+A +PNIIEG+ FR LS++ERE+VA++I VMGRSSPNDKLLLVQ
Sbjct: 718 TAKAIALECGILPSEADATEPNIIEGRAFRVLSEREREQVAKKILVMGRSSPNDKLLLVQ 777
Query: 726 ALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785
ALRK G+VVAVTGDGTNDAPALHEADIGL+MGIQGTEVAKE+SDIIILDDNFASVVKVVR
Sbjct: 778 ALRKAGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVR 837
Query: 786 WGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALA 845
WGRSV+ANIQKFIQFQLTVNVAAL+INVVA++SSGDVPLNAVQLLWVNLIMDTLGALALA
Sbjct: 838 WGRSVYANIQKFIQFQLTVNVAALIINVVASVSSGDVPLNAVQLLWVNLIMDTLGALALA 897
Query: 846 TEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQH 905
TEPPTDHLM R PVGR+EPLITNIMWRNLI+QALYQV+VLLVLNF G SILHL+ E R+H
Sbjct: 898 TEPPTDHLMERSPVGRREPLITNIMWRNLIIQALYQVSVLLVLNFCGISILHLKDETRKH 957
Query: 906 ASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFL 965
A+ VKN+MIFN+FVL QIFNEFNARKPDEINVFTGVTKNYLFMGIIGIT LQIIIIEFL
Sbjct: 958 ATQVKNSMIFNSFVLCQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITFALQIIIIEFL 1017
Query: 966 GKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFVRPFQR 1016
GKFT TVKL WKLW+ S+ IGL SWPLA++GK+IPVP+TP A +F +PFQ+
Sbjct: 1018 GKFTSTVKLSWKLWMVSLAIGLVSWPLAIIGKLIPVPETPFAKFFTKPFQQ 1068
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|298204803|emb|CBI25301.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1563 bits (4047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 792/1072 (73%), Positives = 891/1072 (83%), Gaps = 77/1072 (7%)
Query: 14 DVEVGPSNDGSDVVLEDD--VSSDPFDIAQAKHVPVASLKRWRQASLVLNASRRFRYTLD 71
D+E ++ G V ++D V DPF+IA K+ V +LKRWRQA+LVLNASRRFRYTLD
Sbjct: 82 DMEAASASGGGMVGGDEDEVVYLDPFNIATTKNASVETLKRWRQAALVLNASRRFRYTLD 141
Query: 72 LKKEEEKEKRRRMIRAH------AQVIRVKG----------------------------- 96
L+KEEEKE+RRRMIRAH A + ++ G
Sbjct: 142 LRKEEEKEQRRRMIRAHAQVIRAALLFKLAGEQATIVLGTTVSPPSPVGDYLIGVEQLAS 201
Query: 97 -----------------LSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNF 139
LS+LL+TNLEKG GDD LS RRN FGSNTYP KKGRSFL F
Sbjct: 202 MTRDHNFSALQEYGGARLSDLLETNLEKGTDGDDASLSKRRNMFGSNTYPQKKGRSFLMF 261
Query: 140 LWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSL 199
LWEAWQDLTLIILIVAA ASLALGIKTEGV+EGWYDG SIAFAVFLVI VTAISDYRQSL
Sbjct: 262 LWEAWQDLTLIILIVAAAASLALGIKTEGVKEGWYDGGSIAFAVFLVIFVTAISDYRQSL 321
Query: 200 QFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDE 259
QFQNLN+EKRNI L+ +RGG+ V+ISIFD+VVG++VPL IGDQVPADG+L+TGHSLAIDE
Sbjct: 322 QFQNLNEEKRNIHLKVIRGGRPVEISIFDIVVGDVVPLSIGDQVPADGILITGHSLAIDE 381
Query: 260 SSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPL 319
SSMTGESKIV KDHK PFLMSGCKVADGVGTM+VTGVGINTEWGLLMASISED GEETPL
Sbjct: 382 SSMTGESKIVHKDHKAPFLMSGCKVADGVGTMLVTGVGINTEWGLLMASISEDTGEETPL 441
Query: 320 QVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIK 379
QVRLNGVATFIGIVGLAVA VLAVLL+R+FTGHT DG+ F G TS DAVD VIK
Sbjct: 442 QVRLNGVATFIGIVGLAVAVSVLAVLLIRYFTGHTRDSDGTVQFKSGVTSFGDAVDDVIK 501
Query: 380 IVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKAL--VRRLSACETMGSA 437
I+TIA VAVPEGLPLAVTLTLAYSMRKMMADKAL VRRLSACETMGSA
Sbjct: 502 IITIAVTIVV-------VAVPEGLPLAVTLTLAYSMRKMMADKALACVRRLSACETMGSA 554
Query: 438 TTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVP 497
TTICSDKTGTLTLN+MTVVEA++GRKKI+PPDDSSQ+H V LL EGIA NT GNVFVP
Sbjct: 555 TTICSDKTGTLTLNKMTVVEAYVGRKKIDPPDDSSQLHPDVSSLLHEGIACNTQGNVFVP 614
Query: 498 KDG--EAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRIN 555
K G E +E+SGSPTEKAIL+WAVKLGMKFD +R E+++LHVFPFNSEKKRGGVAV+ N
Sbjct: 615 KGGGEEKMEISGSPTEKAILAWAVKLGMKFDVIREESSILHVFPFNSEKKRGGVAVQGDN 674
Query: 556 SEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYR-F 614
+VH+HWKGAAEM+L SCT+YLD++G LQ + D++FF A+++MAA SLRCVAIAYR F
Sbjct: 675 -KVHIHWKGAAEMVLGSCTEYLDSNGCLQPMGEDKEFFSEAINQMAASSLRCVAIAYRTF 733
Query: 615 ILDK----------WTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNL 664
LDK W LPE +L+LL+IVGIKDPCR GV++AV++C +AGVKVRM+TGDNL
Sbjct: 734 DLDKMPIDEEQRDQWVLPENDLVLLSIVGIKDPCRSGVQNAVRICTNAGVKVRMITGDNL 793
Query: 665 QTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLV 724
QTAKAIALECGIL S+A+A +PNIIEG+ FR LS++ERE+VA++I VMGRSSPNDKLLLV
Sbjct: 794 QTAKAIALECGILPSEADATEPNIIEGRAFRVLSEREREQVAKKILVMGRSSPNDKLLLV 853
Query: 725 QALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVV 784
QALRK G+VVAVTGDGTNDAPALHEADIGL+MGIQGTEVAKE+SDIIILDDNFASVVKVV
Sbjct: 854 QALRKAGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVV 913
Query: 785 RWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALAL 844
RWGRSV+ANIQKFIQFQLTVNVAAL+INVVA++SSGDVPLNAVQLLWVNLIMDTLGALAL
Sbjct: 914 RWGRSVYANIQKFIQFQLTVNVAALIINVVASVSSGDVPLNAVQLLWVNLIMDTLGALAL 973
Query: 845 ATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQ 904
ATEPPTDHLM R PVGR+EPLITNIMWRNLI+QALYQV+VLLVLNF G SILHL+ E R+
Sbjct: 974 ATEPPTDHLMERSPVGRREPLITNIMWRNLIIQALYQVSVLLVLNFCGISILHLKDETRK 1033
Query: 905 HASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEF 964
HA+ VKN+MIFN+FVL QIFNEFNARKPDEINVFTGVTKNYLFMGIIGIT LQIIIIEF
Sbjct: 1034 HATQVKNSMIFNSFVLCQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITFALQIIIIEF 1093
Query: 965 LGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFVRPFQR 1016
LGKFT TVKL WKLW+ S+ IGL SWPLA++GK+IPVP+TP A +F +PFQ+
Sbjct: 1094 LGKFTSTVKLSWKLWMVSLAIGLVSWPLAIIGKLIPVPETPFAKFFTKPFQQ 1145
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224097462|ref|XP_002310944.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222850764|gb|EEE88311.1| autoinhibited calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1558 bits (4035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 797/1091 (73%), Positives = 898/1091 (82%), Gaps = 80/1091 (7%)
Query: 2 STSSVNGLL----SPR---DVEVGPSNDGSDVVLEDDVSSDPFDIAQAKHVPVASLKRWR 54
S+ S NGLL SPR D+EVG + L+DD DPFDIA K+ P+ L+RWR
Sbjct: 5 SSCSSNGLLPSSASPRKTDDLEVG--QPIKEFELDDDDDDDPFDIAHTKNAPLEILRRWR 62
Query: 55 QASLVLNASRRFRYTLDLKKEEEKEKRRRMIRAHAQVIR--------------------- 93
QA+LVLNASRRFRYTLDLKKEEE+E+RRRM+R+HAQVIR
Sbjct: 63 QAALVLNASRRFRYTLDLKKEEEREQRRRMVRSHAQVIRAALLFRLAGEQQIATPPTVTG 122
Query: 94 --------------------------VKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNT 127
VKGLS +LKTNL GI GD+ DL R N+FG+N
Sbjct: 123 DYAIGLEELASMTRDHNIFSLHQCGGVKGLSNMLKTNLATGIVGDENDLIKRMNTFGTNR 182
Query: 128 YPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVI 187
YP KKGR FL FLWEAWQDLTLIILIVAAIASL LGIKTEG+ GWYDGASI+FAV LVI
Sbjct: 183 YPQKKGRGFLRFLWEAWQDLTLIILIVAAIASLGLGIKTEGLSHGWYDGASISFAVMLVI 242
Query: 188 VVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADG 247
+VTA+SDYRQSLQFQNLNKEK+NIQLE MRGG+ +KISIFD+VVG++VPLRIGDQVPADG
Sbjct: 243 IVTAVSDYRQSLQFQNLNKEKQNIQLEVMRGGRIMKISIFDIVVGDVVPLRIGDQVPADG 302
Query: 248 VLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMA 307
+L+TGHSLAIDESSMTGESKIV KD PFLMSGCKVADG+GTM+VTGVGINTEWGLLMA
Sbjct: 303 ILITGHSLAIDESSMTGESKIVHKDQNAPFLMSGCKVADGIGTMLVTGVGINTEWGLLMA 362
Query: 308 SISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGR 367
SISED GEETPLQVRLNG+ATFIGI GLAVA VLAVLL R+FTG+T DGS F+KG
Sbjct: 363 SISEDTGEETPLQVRLNGLATFIGIAGLAVALSVLAVLLGRYFTGNTKNPDGSVQFIKGE 422
Query: 368 TSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKAL--- 424
T+VS AVDGVIKI+TIA VAVPEGLPLAVTLTLAYSMRKMMADKAL
Sbjct: 423 TTVSKAVDGVIKILTIAVTIVV-------VAVPEGLPLAVTLTLAYSMRKMMADKALANI 475
Query: 425 -VRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLS 483
VRRLSACETMGS+TTICSDKTGTLTLN+MTVVEA++G +KINPPDD SQ+ S LL
Sbjct: 476 QVRRLSACETMGSSTTICSDKTGTLTLNQMTVVEAYVGNQKINPPDDPSQLQSEAGLLLC 535
Query: 484 EGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSE 543
EGIAQNTTGNVFVPKDG VE++GSPTEKAILSWA LGMKFD +R+E+ +L VFPFNSE
Sbjct: 536 EGIAQNTTGNVFVPKDGGDVEITGSPTEKAILSWA--LGMKFDVLRAESKILRVFPFNSE 593
Query: 544 KKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAAR 603
KKRGGVA++ +S+VH+HWKGAAEM+LASCT YLD++G LQSID + DFFK A+D+MAA
Sbjct: 594 KKRGGVAIQTADSKVHIHWKGAAEMVLASCTGYLDSNGSLQSIDKEMDFFKVAIDDMAAC 653
Query: 604 SLRCVAIAYR-FILDK----------WTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDA 652
SLRCVAIAYR + LDK W LPE+EL+LLAIVGIKDPCRPGVKDAV++C A
Sbjct: 654 SLRCVAIAYRPYELDKVPTDEESLGKWVLPEDELVLLAIVGIKDPCRPGVKDAVRICTAA 713
Query: 653 GVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712
GVKVRMVTGDN+QTAKAIALECGIL S A+A +PNIIEGKVFRA S+KERE +A++ITVM
Sbjct: 714 GVKVRMVTGDNIQTAKAIALECGILSSGADATEPNIIEGKVFRAYSEKEREIIAKKITVM 773
Query: 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIII 772
GRSSPNDKLLLVQALRKGG+VVAVTGDGTNDAPALHEADIGL+MGIQGTEVAKE+SDI+I
Sbjct: 774 GRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVI 833
Query: 773 LDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWV 832
LDDNFASVVKVVRWGRSV+ANIQKFIQFQLTVNV AL+INVVAA+SSGDVPLN VQLLWV
Sbjct: 834 LDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVGALVINVVAAVSSGDVPLNTVQLLWV 893
Query: 833 NLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKG 892
NLIMDTLGALALATEPPTDHLMHR PVGR+EPLITNIMWRNL++QALYQV VLLVLNF+G
Sbjct: 894 NLIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLLIQALYQVAVLLVLNFRG 953
Query: 893 TSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIG 952
SILHL + R+HA+ KNT+IFNAFVL Q+FNEFNARKPDEINVF GVTKN+LFMGI+G
Sbjct: 954 LSILHLNQDDRKHATIAKNTVIFNAFVLCQVFNEFNARKPDEINVFKGVTKNHLFMGIVG 1013
Query: 953 ITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFVR 1012
T +LQII+IEF G FT TV+L+WK WL + IG+ SWPLA +GK+IPVPKTPL+VYF +
Sbjct: 1014 FTVILQIILIEFTGDFTTTVRLNWKQWLICVAIGIVSWPLAAVGKLIPVPKTPLSVYFRK 1073
Query: 1013 PFQRCINARRS 1023
PF+R AR +
Sbjct: 1074 PFRRFRTARNA 1084
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255546632|ref|XP_002514375.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223546472|gb|EEF47971.1| cation-transporting atpase plant, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1555 bits (4025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 786/1010 (77%), Positives = 889/1010 (88%), Gaps = 31/1010 (3%)
Query: 2 STSSVNGLL-SPR-----DVEVGPSND---GSDVVLEDDVSSDPFDIAQAKHVPVASLKR 52
S+ S NGLL SP DVE GP+ D + S DPFDIA K+ P+ +L+R
Sbjct: 4 SSCSSNGLLQSPSSMRQSDVEAGPNTKVDVHQDHHPHHNESDDPFDIAHTKNAPLETLRR 63
Query: 53 WRQASLVLNASRRFRYTLDLKKEEEKEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISGD 112
WRQA+LVLNASRRFRYTLDLKKEEEK++RRRMIRAHAQVIR KGLS +LKTNLE GI GD
Sbjct: 64 WRQAALVLNASRRFRYTLDLKKEEEKQQRRRMIRAHAQVIRAKGLSSMLKTNLETGIHGD 123
Query: 113 DTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEG 172
+ DL R+++FG+NTYP KKGRS L FLWEAWQD+TLIILI+AAIASLALGIKTEG EEG
Sbjct: 124 EDDLIKRKSAFGANTYPRKKGRSLLRFLWEAWQDVTLIILIIAAIASLALGIKTEGPEEG 183
Query: 173 WYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVG 232
WYDGASIAFAV LVIVVTA+SDYRQSLQFQNLN+EK+NIQLE MRGG+ +KISIFD+VVG
Sbjct: 184 WYDGASIAFAVILVIVVTAVSDYRQSLQFQNLNEEKQNIQLEVMRGGRTLKISIFDIVVG 243
Query: 233 EIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMM 292
++VPL IGDQVPADG+L+TGHSLA+DESSMTGESKIV KD+K PFLMSGCKVADGVGTM+
Sbjct: 244 DVVPLTIGDQVPADGILITGHSLALDESSMTGESKIVHKDYKAPFLMSGCKVADGVGTML 303
Query: 293 VTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTG 352
VTGVGINTEWGLLMASISED GEETPLQVRLNGVATFIGIVGL+VA VLAVLL R+FTG
Sbjct: 304 VTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVSVLAVLLGRYFTG 363
Query: 353 HTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLA 412
+T +G FVKG T +S+A+DGVIKIVTIA TIVVVAVPEGLPLAVTLTLA
Sbjct: 364 NTRNSNGDVQFVKGETKISEAIDGVIKIVTIAV-------TIVVVAVPEGLPLAVTLTLA 416
Query: 413 YSMRKMMADKAL----VRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPP 468
YSMRKMMADKAL VRRLSACETMGSATTICSDKTGTLTLN+MTVVEA++G+KK+ P
Sbjct: 417 YSMRKMMADKALANLQVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGKKKMIPA 476
Query: 469 DDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRV 528
DDS+Q+HS V LL EG+AQN+TG+VFVPKDG VE+SGSPTEKAILSWAVKLGMKFD +
Sbjct: 477 DDSAQLHSEVSSLLCEGVAQNSTGSVFVPKDGGDVEISGSPTEKAILSWAVKLGMKFDSI 536
Query: 529 RSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDG 588
RS++ VL VFPFNSEKKRGGVA++R +S+VH+HWKGAAE++LASCT+Y+D++G +QSID
Sbjct: 537 RSQSKVLQVFPFNSEKKRGGVAIQRTDSKVHIHWKGAAELVLASCTRYMDSNGSVQSIDE 596
Query: 589 DEDFFKAAVDEMAARSLRCVAIAYRFI-----------LDKWTLPEEELILLAIVGIKDP 637
D+DF KAA+D+MAA SLRCVAIAYR I LDKW LPE++L+LLAIVGIKDP
Sbjct: 597 DKDFLKAAIDDMAASSLRCVAIAYRSIVLEKVPADEEGLDKWVLPEDDLVLLAIVGIKDP 656
Query: 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRAL 697
CRPGV++AV++C +AGVKVRMVTGDNLQTAKAIALECGIL S+A+A +PNIIEGKVFR
Sbjct: 657 CRPGVENAVRVCTEAGVKVRMVTGDNLQTAKAIALECGILKSNADATEPNIIEGKVFRVY 716
Query: 698 SDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMG 757
S+KERE +A++ITVMGRSSPNDKLLLVQALRKGG+VVAVTGDGTNDAPALHEADIGL+MG
Sbjct: 717 SEKERELIAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMG 776
Query: 758 IQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAI 817
IQGTEVAKE+SDIIILDDNFASVVKVVRWGRSV+ANIQKFIQFQLTVNVAAL+INVVAA+
Sbjct: 777 IQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAV 836
Query: 818 SSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQ 877
SSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHR PVGR+EPLITNIMWRNL++Q
Sbjct: 837 SSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRREPLITNIMWRNLLIQ 896
Query: 878 ALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINV 937
ALYQV VLLVLNF G +ILHL+ E +HA+DVKNTMIFNAFVL QIFNEFNARKPDEINV
Sbjct: 897 ALYQVGVLLVLNFWGKTILHLDDEETEHATDVKNTMIFNAFVLCQIFNEFNARKPDEINV 956
Query: 938 FTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGL 987
F+GVTKN LF+GI+G T +LQII+IEF GKFT TV+L+W LWLAS+ I
Sbjct: 957 FSGVTKNRLFIGIVGFTFILQIILIEFAGKFTSTVRLNWTLWLASLAIAF 1006
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356547482|ref|XP_003542141.1| PREDICTED: calcium-transporting ATPase 9, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1544 bits (3997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 779/1058 (73%), Positives = 878/1058 (82%), Gaps = 68/1058 (6%)
Query: 14 DVEVGPSNDGSDVVLEDDVSSDPFDIAQAKHVPVASLKRWRQASLVLNASRRFRYTLDLK 73
D S++ D +L D +DPFDI K+ P SLKRWRQA+ VLNASRRFRYTLDLK
Sbjct: 30 DPTTNDSDNDEDELLVD--PNDPFDITHTKNAPPESLKRWRQAAFVLNASRRFRYTLDLK 87
Query: 74 KEEEKEKRRRMIRAHAQVIR---------------------------------------- 93
KEEEKE+++ MIR+HAQVIR
Sbjct: 88 KEEEKEQKKSMIRSHAQVIRAALLFRLAGERELAVASPSPVGEYAVGLEQLVSMTKNQNI 147
Query: 94 --------VKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQ 145
VKGLS LLK+ +KGI+GDD DLS R+N+FG+NTYP KKGRSF FLWE+WQ
Sbjct: 148 SALQQYGGVKGLSNLLKSIPDKGINGDDADLSKRKNAFGTNTYPRKKGRSFWRFLWESWQ 207
Query: 146 DLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLN 205
DLTLIILI+AA+ SL LGIKTEG+EEGWYDG SIAFAVFLVI+VTA+SDYRQSLQFQNLN
Sbjct: 208 DLTLIILIIAAVVSLVLGIKTEGLEEGWYDGGSIAFAVFLVIIVTAVSDYRQSLQFQNLN 267
Query: 206 KEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGE 265
EK+NI+LE +RGG+ ++ISIFD+VVG++VPL+IGDQVPADGV++TGHSLAIDESSMTGE
Sbjct: 268 AEKQNIKLEVIRGGRTIQISIFDIVVGDLVPLKIGDQVPADGVVITGHSLAIDESSMTGE 327
Query: 266 SKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNG 325
SKI+ KD KTPFLMSGCKVADG+G M+VTGVGINTEWGLLMASISED GEETPLQVRLNG
Sbjct: 328 SKIIHKDQKTPFLMSGCKVADGIGAMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNG 387
Query: 326 VATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIAT 385
VATFIGIVGL VA VLAVLL R+F+GH+ DG FV G TS+S AVDGVIKI TIA
Sbjct: 388 VATFIGIVGLTVAVCVLAVLLGRYFSGHSKDLDGKVQFVAGETSISKAVDGVIKIFTIAV 447
Query: 386 NSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKT 445
VAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKT
Sbjct: 448 TIVV-------VAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKT 500
Query: 446 GTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEV 505
GTLTLN+MTVVEAF+GRKK+NPPDD +++H V L++EGIAQNTTGN+FVPKDG EV
Sbjct: 501 GTLTLNQMTVVEAFVGRKKLNPPDDLTKLHPEVSSLINEGIAQNTTGNIFVPKDGGEAEV 560
Query: 506 SGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGA 565
SGSPTEKAILSWAVKLGM FD +RS +T+LHVFPFNSEKKRGG+A+K +S VH+HWKGA
Sbjct: 561 SGSPTEKAILSWAVKLGMNFDLIRSNSTILHVFPFNSEKKRGGLALKLPDSAVHIHWKGA 620
Query: 566 AEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFI---------- 615
AE++L CT+YLD+DG L+SI+ ++ FFK A+++MAA+SLRCVAIAYR
Sbjct: 621 AEIVLGKCTQYLDSDGHLKSIEEEKVFFKNAIEDMAAQSLRCVAIAYRSYDLDKIPSNEE 680
Query: 616 -LDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALEC 674
LD+W LPE EL+LLAIVGIKDPCRPGVKDAVK+C +AGVKVRMVTGDNLQTAKAIALEC
Sbjct: 681 ELDQWCLPEHELVLLAIVGIKDPCRPGVKDAVKVCTEAGVKVRMVTGDNLQTAKAIALEC 740
Query: 675 GILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVV 734
GIL S +A +PNIIEGK FR LS+KERE+VA++ITVMGRSSP DKLL+VQALR GG+VV
Sbjct: 741 GILMSTEDAVEPNIIEGKTFRELSEKEREQVAKKITVMGRSSPTDKLLIVQALRTGGEVV 800
Query: 735 AVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANI 794
AVTGDGTNDAPALHEADIGL+MGIQGTEVAKE+SDIIILDDNFASVVKVVRWGRSV+ANI
Sbjct: 801 AVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANI 860
Query: 795 QKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLM 854
QKFIQFQLTVNVAAL+INVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTD+LM
Sbjct: 861 QKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDNLM 920
Query: 855 HRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMI 914
HR PVGR+EPLITN+MWRNLIVQALYQV VLLVLNF G SIL + H VKNT+I
Sbjct: 921 HRSPVGRREPLITNVMWRNLIVQALYQVIVLLVLNFGGESILRNNQDSIAHTIQVKNTLI 980
Query: 915 FNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKL 974
FNAFV QIFNEFNARKP+E+NVF GVTKN LFMGI+G+T VLQIIIIEFLGKFT TVKL
Sbjct: 981 FNAFVFCQIFNEFNARKPEEMNVFRGVTKNRLFMGIVGMTFVLQIIIIEFLGKFTTTVKL 1040
Query: 975 DWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFVR 1012
DWKLWLAS+ IGL SWPLA++GK+IPVPKTPL+ YF R
Sbjct: 1041 DWKLWLASLCIGLVSWPLAIVGKLIPVPKTPLSRYFRR 1078
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356557197|ref|XP_003546904.1| PREDICTED: calcium-transporting ATPase 9, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1541 bits (3989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 773/1035 (74%), Positives = 871/1035 (84%), Gaps = 66/1035 (6%)
Query: 37 FDIAQAKHVPVASLKRWRQASLVLNASRRFRYTLDLKKEEEKEKRRRMIRAHAQVIR--- 93
FDI K+ P +LKRWRQA+ VLNASRRFRYTLDLKKEEEKE+++ MIR+HAQVIR
Sbjct: 52 FDITHTKNAPPEALKRWRQAAFVLNASRRFRYTLDLKKEEEKEQKKSMIRSHAQVIRAAL 111
Query: 94 ---------------------------------------------VKGLSELLKTNLEKG 108
VKGLS LLK+N +KG
Sbjct: 112 LFRLAGERELAVASPSPVGEYTVGLEQLVSMTKNQNISALQQYGGVKGLSNLLKSNPDKG 171
Query: 109 ISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEG 168
ISGDD DLS R+N+FG+NTYP KKGRSF FLWE+WQDLTLIILI+AA+ SL LGIKTEG
Sbjct: 172 ISGDDVDLSKRKNAFGTNTYPRKKGRSFWRFLWESWQDLTLIILIIAAVVSLVLGIKTEG 231
Query: 169 VEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFD 228
+EEGWYDG SIAFAVFLVI+VTA+SDYRQSLQFQNLN EK+NI+LE +RGG+ ++ISIFD
Sbjct: 232 LEEGWYDGGSIAFAVFLVIIVTAVSDYRQSLQFQNLNAEKQNIKLEVIRGGRTIQISIFD 291
Query: 229 VVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGV 288
+VVG++VPL+IGDQVPADGV++TGHSLAIDESSMTGESKI+ KD K PFLMSGCKVADGV
Sbjct: 292 IVVGDLVPLKIGDQVPADGVVITGHSLAIDESSMTGESKIIHKDQKAPFLMSGCKVADGV 351
Query: 289 GTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVR 348
G M+VTGVGINTEWGLLMASISED GEETPLQVRLNGVATFIGIVGL VA VLAVLL R
Sbjct: 352 GAMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVCVLAVLLGR 411
Query: 349 FFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVT 408
+F+GHT DG FV G TS+S+AVDGVIKI TIA VAVPEGLPLAVT
Sbjct: 412 YFSGHTKDLDGRVQFVAGETSISEAVDGVIKIFTIAVTIVV-------VAVPEGLPLAVT 464
Query: 409 LTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPP 468
LTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLN+MTVVEA +GRKK+NPP
Sbjct: 465 LTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEACVGRKKLNPP 524
Query: 469 DDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRV 528
DD +++H V+ L++EGIAQNTTGNVFVPKDG VEVSGSPTEKAILSWAVKLGM FD +
Sbjct: 525 DDLTKLHPEVLSLINEGIAQNTTGNVFVPKDGGEVEVSGSPTEKAILSWAVKLGMNFDLI 584
Query: 529 RSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDG 588
RS +T+LHVFPFNSEKKRGG+A+K +S VH+HWKGAAE++L +CT+YLD+DG L+SI+
Sbjct: 585 RSNSTILHVFPFNSEKKRGGLALKLPDSAVHIHWKGAAEIVLGTCTQYLDSDGHLKSIEE 644
Query: 589 DEDFFKAAVDEMAARSLRCVAIAYRFI-----------LDKWTLPEEELILLAIVGIKDP 637
++ FFK ++++MAA+SLRCVAIAYR LD+W+LPE EL+LLAIVGIKDP
Sbjct: 645 EKVFFKNSIEDMAAQSLRCVAIAYRSYDLDKIPSNEEELDQWSLPEHELVLLAIVGIKDP 704
Query: 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRAL 697
CRPGVKDAVK+C +AGVKVRMVTGDNLQTAKAIA ECGIL S+ +A +PNIIEGK FR L
Sbjct: 705 CRPGVKDAVKICTEAGVKVRMVTGDNLQTAKAIAFECGILMSNDDAVEPNIIEGKTFREL 764
Query: 698 SDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMG 757
S+KERE+VA++ITVMGRSSP DKLLLVQALR GG+VVAVTGDGTNDAPALHEADIGL+MG
Sbjct: 765 SEKEREQVAKKITVMGRSSPTDKLLLVQALRTGGEVVAVTGDGTNDAPALHEADIGLSMG 824
Query: 758 IQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAI 817
IQGTEVAKE+SDIIILDDNFASVVKVVRWGRSV+ANIQKFIQFQLTVNVAAL+INVVAAI
Sbjct: 825 IQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAI 884
Query: 818 SSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQ 877
SSGDVPLNAVQLLWVN+IMDTLGALALATEPPTD+LMHR PVGR+EPLITN+MWRNL VQ
Sbjct: 885 SSGDVPLNAVQLLWVNVIMDTLGALALATEPPTDNLMHRSPVGRREPLITNVMWRNLGVQ 944
Query: 878 ALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINV 937
ALYQVTVLLVLNF G SIL + + H VKNT+IFNAFV QIFNEFNARKP+E+NV
Sbjct: 945 ALYQVTVLLVLNFGGESILRNDQDSVAHTIQVKNTLIFNAFVFCQIFNEFNARKPEEMNV 1004
Query: 938 FTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGK 997
F GVTKN LFMGI+G+T VLQIIIIEFLGKFT TVKLDWKLWLAS+ IGL SWPLA++GK
Sbjct: 1005 FRGVTKNGLFMGIVGMTFVLQIIIIEFLGKFTTTVKLDWKLWLASLCIGLLSWPLAIIGK 1064
Query: 998 MIPVPKTPLAVYFVR 1012
IPVPKTPL+ YF R
Sbjct: 1065 FIPVPKTPLSRYFRR 1079
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356523453|ref|XP_003530353.1| PREDICTED: calcium-transporting ATPase 9, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1536 bits (3978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 786/1039 (75%), Positives = 881/1039 (84%), Gaps = 68/1039 (6%)
Query: 35 DPFDIAQAKHVPVASLKRWRQASLVLNASRRFRYTLDLKKEEEKEKRRRMIRAHAQVIR- 93
DPFDI Q K+ +L+RWRQA+LVLNASRRFRYTLDL+KEEEKE+++ +IRAHAQVIR
Sbjct: 45 DPFDITQTKNASHDTLRRWRQAALVLNASRRFRYTLDLRKEEEKEQKKHLIRAHAQVIRA 104
Query: 94 -----------------------------------------------VKGLSELLKTNLE 106
++GLS L+K+N +
Sbjct: 105 ALLFRLAGERELAASPPTPAGDYDIGLEQLVSMAKDQNISALQQYGGIRGLSNLIKSNPD 164
Query: 107 KGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKT 166
KG+SGDD DL R+N+FG+NTYP KKGRSF FLWEAWQDLTLIILI+AA SLALGIKT
Sbjct: 165 KGVSGDDADLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLALGIKT 224
Query: 167 EGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISI 226
EG+ EGWYDG SIAFAV LVIVVTA+SDYRQSLQFQNLN EK+NIQLE +RGG+ +KISI
Sbjct: 225 EGLAEGWYDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVIRGGRTIKISI 284
Query: 227 FDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVAD 286
FD+VVG+++PL+IGDQVPADGVL+TGHSLAIDESSMTGESKIV KDHKTPF MSGCKVAD
Sbjct: 285 FDIVVGDVIPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHKTPFFMSGCKVAD 344
Query: 287 GVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLL 346
GVG M+VTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIG+VGL+VA LVLAVLL
Sbjct: 345 GVGLMLVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGVVGLSVAVLVLAVLL 404
Query: 347 VRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLA 406
R+F+GHT DG+ FV G+TS+S+AVDGVIKI TIA TIVVVAVPEGLPLA
Sbjct: 405 GRYFSGHTKDLDGNVEFVAGKTSLSNAVDGVIKIFTIAV-------TIVVVAVPEGLPLA 457
Query: 407 VTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKIN 466
VTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLN+MTVVEA++G K+N
Sbjct: 458 VTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGSTKVN 517
Query: 467 PPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFD 526
PPDDSS++H + L++EGIAQNTTGNVFVPKDG EVSGSPTEKAILSWAVKLGM FD
Sbjct: 518 PPDDSSKLHPKALSLINEGIAQNTTGNVFVPKDGGETEVSGSPTEKAILSWAVKLGMNFD 577
Query: 527 RVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSI 586
+RS +TVLHVFPFNSEKKRGGVA+K +S +H+HWKGAAE++L +CT+YLD+DGQLQSI
Sbjct: 578 VIRSNSTVLHVFPFNSEKKRGGVALKLGDSGIHIHWKGAAEIVLGTCTQYLDSDGQLQSI 637
Query: 587 DGDED-FFKAAVDEMAARSLRCVAIAYRFI-----------LDKWTLPEEELILLAIVGI 634
+ D+ FFK A+D+MAARSLRCVAIAYR LD+W+LPE EL+LLAIVGI
Sbjct: 638 EEDKKAFFKDAIDDMAARSLRCVAIAYRSYELDKVPSSEQDLDQWSLPEYELVLLAIVGI 697
Query: 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVF 694
KDPCRPGVKDAVK+C DAGVKVRMVTGDNLQTAKAIALECGIL S +A +PNIIEGK F
Sbjct: 698 KDPCRPGVKDAVKVCTDAGVKVRMVTGDNLQTAKAIALECGILASIEDAVEPNIIEGKKF 757
Query: 695 RALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754
R LS+KERE +A++ITVMGRSSPNDKLLLVQALRKGG+VVAVTGDGTNDAPALHEADIGL
Sbjct: 758 RELSEKEREDIAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGL 817
Query: 755 AMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVV 814
+MGI GTEVAKE+SDIIILDDNFASVVKVVRWGRSV+ANIQKFIQFQLTVNVAAL+INVV
Sbjct: 818 SMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVV 877
Query: 815 AAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNL 874
AAI+SGDVPLNAVQLLWVNLIMDTLGALALATEPPTD LMHR PVGR+EPLITNIMWRNL
Sbjct: 878 AAITSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDRLMHRSPVGRREPLITNIMWRNL 937
Query: 875 IVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDE 934
IVQA YQ+ VLLVLNF G SIL + R A VKNT+IFNAFVL QIFNEFNARKPDE
Sbjct: 938 IVQAAYQIAVLLVLNFCGESILPKQ-NTRADAFQVKNTLIFNAFVLCQIFNEFNARKPDE 996
Query: 935 INVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAV 994
+NVF GVTKN LF+GI+G+T +LQIIIIEFLGKFT TV+LDWKLWLAS+GIG SWPLA+
Sbjct: 997 MNVFRGVTKNKLFVGIVGVTFILQIIIIEFLGKFTSTVRLDWKLWLASLGIGFVSWPLAI 1056
Query: 995 LGKMIPVPKTPLAVYFVRP 1013
+GK IPVPKTPLA YF++P
Sbjct: 1057 VGKFIPVPKTPLARYFLKP 1075
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521847|ref|XP_003529562.1| PREDICTED: calcium-transporting ATPase 9, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1523 bits (3944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 781/1054 (74%), Positives = 877/1054 (83%), Gaps = 67/1054 (6%)
Query: 19 PSNDGSDVVLEDDVSSDPFDIAQAKHVPVASLKRWRQASLVLNASRRFRYTLDLKKEEEK 78
PS+D D E DPFDI Q K+V +L+RWRQA+LVLNASRRFRYTLDL+KEEEK
Sbjct: 28 PSSDHDDDEQELVDPDDPFDITQTKNVSHDTLRRWRQAALVLNASRRFRYTLDLRKEEEK 87
Query: 79 EKRRRMIRAHAQVIR--------------------------------------------- 93
E+++ +IRAHAQVIR
Sbjct: 88 EQKKHLIRAHAQVIRAALLFRLAGERELAVSPPTPVGDYDIGLEQLVSMSKDQNISALQQ 147
Query: 94 ---VKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLI 150
++GLS L+K+N +KGISGDD DL R+N+FG+NTYP KKGRSF FLWEAWQDLTLI
Sbjct: 148 YGGIRGLSNLIKSNPDKGISGDDADLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLI 207
Query: 151 ILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRN 210
ILI+AA SLALGIKTEG+ EGWYDG SIAFAV LVIVVTA+SDYRQSLQFQNLN EK+N
Sbjct: 208 ILIIAAAVSLALGIKTEGLAEGWYDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNAEKQN 267
Query: 211 IQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVR 270
IQLE +RGG+ +KISIFD+VVG+++PL+IGDQVPADGVL+TGHSLAIDESSMTGESKIV
Sbjct: 268 IQLEVIRGGRTIKISIFDIVVGDVIPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVH 327
Query: 271 KDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFI 330
KDH+TPF MSGC A GVG M+VTGVGINTEWGLLMASISED GEETPLQVRLNGVATFI
Sbjct: 328 KDHETPFFMSGCMPAHGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFI 387
Query: 331 GIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAI 390
G+VGL VA LVLAVLL R+F+GHT DG+ FV G+TSVS+AVD VIKI TIA
Sbjct: 388 GVVGLTVAVLVLAVLLGRYFSGHTKDIDGNVEFVAGKTSVSNAVDDVIKIFTIAVTIVV- 446
Query: 391 QVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTL 450
VAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTL
Sbjct: 447 ------VAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTL 500
Query: 451 NEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPT 510
N+MTVVEA++G K+ PDDSS++H + L++EGIAQNTTGNVFVPKDG EVSGSPT
Sbjct: 501 NQMTVVEAYVGSTKVYSPDDSSKLHPKALSLINEGIAQNTTGNVFVPKDGGETEVSGSPT 560
Query: 511 EKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMIL 570
EKAIL WAVKLGM FD +RS +TVLHVFPFNSEKKRGGVA+K +S VH+HWKGAAE++L
Sbjct: 561 EKAILKWAVKLGMDFDVIRSNSTVLHVFPFNSEKKRGGVALKLGDSGVHIHWKGAAEIVL 620
Query: 571 ASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFI-----------LDKW 619
+CT+YLD+DGQLQSI+ ++ FFK A+D+MAARSLRCVAIAYR LD+W
Sbjct: 621 GTCTQYLDSDGQLQSIEEEKGFFKDAIDDMAARSLRCVAIAYRSYELDKVPSSEQDLDQW 680
Query: 620 TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGS 679
+LPE EL+LLAIVGIKDPCRPGVKDAVK+C DAGVKVRMVTGDNLQTAKAIALECGIL S
Sbjct: 681 SLPEHELVLLAIVGIKDPCRPGVKDAVKVCTDAGVKVRMVTGDNLQTAKAIALECGILAS 740
Query: 680 DAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGD 739
+A +PNIIEGK FR LS+KERE +A++ITVMGRSSPNDKLLLVQALRKGG+VVAVTGD
Sbjct: 741 IEDAVEPNIIEGKKFRELSEKEREDIAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGD 800
Query: 740 GTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQ 799
GTNDAPALHEADIGL+MGIQGTEVAKE+SDIIILDDNFASVVKVVRWGRSV+ANIQKFIQ
Sbjct: 801 GTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQ 860
Query: 800 FQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPV 859
FQLTVNVAAL+INVVAAI+SGDVPLNAVQLLWVNLIMDTLGALALATEPPTD LMHR PV
Sbjct: 861 FQLTVNVAALVINVVAAITSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDRLMHRSPV 920
Query: 860 GRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFV 919
GR+E LITNIMWRNLIVQA+YQ+ VLLVLNF G SIL + + + A VKNT+IFNAFV
Sbjct: 921 GRRESLITNIMWRNLIVQAVYQIAVLLVLNFCGESILPKQ-DTKADAFQVKNTLIFNAFV 979
Query: 920 LSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLW 979
L QIFNEFNARKPDE+NVF GVT N LFMGI+G+T +LQIIIIEFLGKFT TV+LDWKLW
Sbjct: 980 LCQIFNEFNARKPDEMNVFRGVTNNKLFMGIVGVTFILQIIIIEFLGKFTSTVRLDWKLW 1039
Query: 980 LASIGIGLFSWPLAVLGKMIPVPKTPLAVYFVRP 1013
LAS+GIGL SWPLA++GK IPVPKTPLA YF++P
Sbjct: 1040 LASLGIGLVSWPLAIVGKFIPVPKTPLARYFLKP 1073
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1023 | ||||||
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.895 | 0.843 | 0.701 | 0.0 | |
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.886 | 0.848 | 0.666 | 0.0 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.881 | 0.839 | 0.668 | 0.0 | |
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.881 | 0.873 | 0.514 | 4.4e-235 | |
| TAIR|locus:2084578 | 1017 | AT3G22910 [Arabidopsis thalian | 0.869 | 0.874 | 0.510 | 8.9e-228 | |
| TAIR|locus:2059201 | 1015 | ACA7 "auto-regulated Ca2+-ATPa | 0.590 | 0.595 | 0.512 | 1.4e-208 | |
| TAIR|locus:2120096 | 1014 | ACA2 "calcium ATPase 2" [Arabi | 0.864 | 0.871 | 0.471 | 7.1e-204 | |
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.863 | 0.865 | 0.467 | 2.4e-203 | |
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.868 | 0.862 | 0.446 | 7.7e-196 | |
| TAIR|locus:2082528 | 1025 | ACA11 "autoinhibited Ca2+-ATPa | 0.766 | 0.764 | 0.450 | 3.6e-174 |
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3324 (1175.2 bits), Expect = 0., Sum P(2) = 0.
Identities = 655/934 (70%), Positives = 750/934 (80%)
Query: 94 VKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDXXXXXXX 153
VKG++E LK+N+E+GI+ D+ ++ +R+N+FGSNTYP KKG++F FLWEAWQD
Sbjct: 153 VKGVAEKLKSNMEQGINEDEKEVIDRKNAFGSNTYPKKKGKNFFMFLWEAWQDLTLIILI 212
Query: 154 XXXXXXXXXXXKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQL 213
KTEG++EGW DG SIAFAV LVIVVTA+SDYRQSLQFQNLN EKRNIQL
Sbjct: 213 IAAVTSLALGIKTEGLKEGWLDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNDEKRNIQL 272
Query: 214 EAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDH 273
E MRGG+ VKISI+DVVVG+++PLRIGDQVPADGVL++GHSLAIDESSMTGESKIV KD
Sbjct: 273 EVMRGGRTVKISIYDVVVGDVIPLRIGDQVPADGVLISGHSLAIDESSMTGESKIVHKDQ 332
Query: 274 KTPFLMSGCKVADXXXXXXXXXXXINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIX 333
K+PFLMSGCKVAD INTEWGLLMASISED GEETPLQVRLNG+ATFIGI
Sbjct: 333 KSPFLMSGCKVADGVGNMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGLATFIGIV 392
Query: 334 XXXXXXXXXXXXXXXXXTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVT 393
TG T +G++ F+KG TS+SD VD +KI TIA VT
Sbjct: 393 GLSVALVVLVALLVRYFTGTTQDTNGATQFIKGTTSISDIVDDCVKIFTIA-------VT 445
Query: 394 IVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEM 453
IVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLN+M
Sbjct: 446 IVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQM 505
Query: 454 TVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKA 513
TVVE + G K++ D+ S +H ++ L+SEG+AQNTTGN+F PKDG VE+SGSPTEKA
Sbjct: 506 TVVETYAGGSKMDVADNPSGLHPKLVALISEGVAQNTTGNIFHPKDGGEVEISGSPTEKA 565
Query: 514 ILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASC 573
ILSWA KLGMKFD +RSE+ ++H FPFNSEKKRGGVAV R +SEV +HWKGAAE++LA C
Sbjct: 566 ILSWAYKLGMKFDTIRSESAIIHAFPFNSEKKRGGVAVLRGDSEVFIHWKGAAEIVLACC 625
Query: 574 TKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFI-----------LDKWTLP 622
T+Y+D++G LQSI+ ++FF+ A+D MA SLRCVAIA R LDKW LP
Sbjct: 626 TQYMDSNGTLQSIESQKEFFRVAIDSMAKNSLRCVAIACRTQELNQVPKEQEDLDKWALP 685
Query: 623 EEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE 682
E+ELILLAIVGIKDPCRPGV++AV++C AGVKVRMVTGDNLQTAKAIALECGIL SD E
Sbjct: 686 EDELILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVTGDNLQTAKAIALECGILSSDTE 745
Query: 683 ANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKXXXXXXXXXXXXN 742
A +P IIEGKVFR LS+KERE+VA++ITVMGRSSPNDKLLLVQALRK N
Sbjct: 746 AVEPTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKNGDVVAVTGDGTN 805
Query: 743 DAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQL 802
DAPALHEADIGL+MGI GTEVAKE+SDIIILDDNFASVVKVVRWGRSV+ANIQKFIQFQL
Sbjct: 806 DAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQL 865
Query: 803 TXXXXXXXXXXXXXXSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRK 862
T SSGDVPL AVQLLWVNLIMDTLGALALATEPPTDHLMHR PVGR+
Sbjct: 866 TVNVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRR 925
Query: 863 EPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQ 922
EPLITNIMWRNL+VQ+ YQV VLLVLNF G SIL L E HA +VKNTMIFNAFV+ Q
Sbjct: 926 EPLITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTMIFNAFVMCQ 985
Query: 923 IFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLAS 982
IFNEFNARKPDE+NVF GV KN LF+ I+G+T +LQIII+ FLGKF TV+L W+LWLAS
Sbjct: 986 IFNEFNARKPDEMNVFRGVNKNPLFVAIVGVTFILQIIIVTFLGKFAHTVRLGWQLWLAS 1045
Query: 983 IGIGLFSWPLAVLGKMIPVPKTPLAVYFVRPFQR 1016
I IGL SWPLA++GK+IPVPKTP++VYF +PF++
Sbjct: 1046 IIIGLVSWPLAIVGKLIPVPKTPMSVYFKKPFRK 1079
|
|
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3138 (1109.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 620/930 (66%), Positives = 729/930 (78%)
Query: 94 VKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDXXXXXXX 153
V+GLS+LLKTNLEKGI GDD D+ R+++FGSNTYP KKGRSF F+WEA QD
Sbjct: 139 VRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSNTYPQKKGRSFWRFVWEASQDLTLIILI 198
Query: 154 XXXXXXXXXXXKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQL 213
KTEG+E+GWYDG SIAFAV LVIVVTA SDYRQSLQFQNLN+EKRNI+L
Sbjct: 199 VAAVASLALGIKTEGIEKGWYDGISIAFAVLLVIVVTATSDYRQSLQFQNLNEEKRNIRL 258
Query: 214 EAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDH 273
E R G+ V+ISI+D+VVG+++PL IGDQVPADGVLV GHSLA+DESSMTGESKIV+K+
Sbjct: 259 EVTRDGRRVEISIYDIVVGDVIPLNIGDQVPADGVLVAGHSLAVDESSMTGESKIVQKNS 318
Query: 274 -KTPFLMSGCKVADXXXXXXXXXXXINTEWGLLMASISEDNGEETPLQVRLNGVATFIGI 332
K PFLMSGCKVAD +NTEWGLLMAS+SEDNG ETPLQVRLNGVATFIGI
Sbjct: 319 TKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMASVSEDNGGETPLQVRLNGVATFIGI 378
Query: 333 XXXXXXXXXXXXXXXXXXTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQV 392
TGHT E G F+ G+T +D +++I T+A V
Sbjct: 379 VGLTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKTKFEHVLDDLVEIFTVA-------V 431
Query: 393 TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNE 452
TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNE
Sbjct: 432 TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNE 491
Query: 453 MTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEK 512
MTVVE + G +K++ PD SS++ S +L EGIA NTTG+VF + GE ++VSGSPTE+
Sbjct: 492 MTVVECYAGLQKMDSPDSSSKLPSAFTSILVEGIAHNTTGSVFRSESGE-IQVSGSPTER 550
Query: 513 AILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILAS 572
AIL+WA+KLGM FD ++SE++ + FPFNSEKKRGGVAVK +S VH+HWKGAAE++L S
Sbjct: 551 AILNWAIKLGMDFDALKSESSAVQFFPFNSEKKRGGVAVKSPDSSVHIHWKGAAEIVLGS 610
Query: 573 CTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYR-FILDK----------WT 620
CT Y+D + D+ K A+D+MAARSLRCVAIA+R F DK W
Sbjct: 611 CTHYMDESESFVDMSEDKMGGLKDAIDDMAARSLRCVAIAFRTFEADKIPTDEEQLSRWE 670
Query: 621 LPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSD 680
LPE++LILLAIVGIKDPCRPGVK++V LC+ AGVKVRMVTGDN+QTAKAIALECGIL SD
Sbjct: 671 LPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIALECGILASD 730
Query: 681 AEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKXXXXXXXXXXX 740
++A++PN+IEGKVFR+ S++ER+++ +EI+VMGRSSPNDKLLLVQ+L++
Sbjct: 731 SDASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRRGHVVAVTGDG 790
Query: 741 XNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQF 800
NDAPALHEADIGLAMGIQGTEVAKE SDIIILDDNF SVVKVVRWGRSV+ANIQKFIQF
Sbjct: 791 TNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVYANIQKFIQF 850
Query: 801 QLTXXXXXXXXXXXXXXSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVG 860
QLT S+G+VPL AVQLLWVNLIMDTLGALALATEPPTDHLM R PVG
Sbjct: 851 QLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMDRAPVG 910
Query: 861 RKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVL 920
R+EPLITNIMWRNL +QA+YQVTVLL+LNF+G SILHL+ + +A VKNT+IFNAFV+
Sbjct: 911 RREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKS--KPNAERVKNTVIFNAFVI 968
Query: 921 SQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWL 980
Q+FNEFNARKPDEIN+F GV +N+LF+GII IT VLQ++I+EFLG F T KLDW++WL
Sbjct: 969 CQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVVIVEFLGTFASTTKLDWEMWL 1028
Query: 981 ASIGIGLFSWPLAVLGKMIPVPKTPLAVYF 1010
IGIG SWPLAV+GK+IPVP+TP++ YF
Sbjct: 1029 VCIGIGSISWPLAVIGKLIPVPETPVSQYF 1058
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3137 (1109.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 618/925 (66%), Positives = 721/925 (77%)
Query: 95 KGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDXXXXXXXX 154
+GL+ LLKTN EKGISGDD DL R+ +GSNTYP KKG+ FL FLW+A D
Sbjct: 140 QGLANLLKTNPEKGISGDDDDLLKRKTIYGSNTYPRKKGKGFLRFLWDACHDLTLIILMV 199
Query: 155 XXXXXXXXXXKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLE 214
KTEG++EGWYDG SIAFAV LVIVVTA+SDY+QSLQFQNLN EKRNI LE
Sbjct: 200 AAVASLALGIKTEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQSLQFQNLNDEKRNIHLE 259
Query: 215 AMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKD-H 273
+RGG+ V+ISI+D+VVG+++PL IG+QVPADGVL++GHSLA+DESSMTGESKIV KD +
Sbjct: 260 VLRGGRRVEISIYDIVVGDVIPLNIGNQVPADGVLISGHSLALDESSMTGESKIVNKDAN 319
Query: 274 KTPFLMSGCKVADXXXXXXXXXXXINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIX 333
K PFLMSGCKVAD +NTEWGLLMASISEDNGEETPLQVRLNGVATFIG
Sbjct: 320 KDPFLMSGCKVADGNGSMLVTGVGVNTEWGLLMASISEDNGEETPLQVRLNGVATFIGSI 379
Query: 334 XXXXXXXXXXXXXXXXXTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVT 393
TGHT +G FVKG+T V +D V+K++T+A VT
Sbjct: 380 GLAVAAAVLVILLTRYFTGHTKDNNGGPQFVKGKTKVGHVIDDVVKVLTVA-------VT 432
Query: 394 IVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEM 453
IVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLN+M
Sbjct: 433 IVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQM 492
Query: 454 TVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKA 513
TVVE++ G KK D+ Q+ + + L+ EGI+QNTTG++FVP+ G +E SGSPTEKA
Sbjct: 493 TVVESYAGGKKT----DTEQLPATITSLVVEGISQNTTGSIFVPEGGGDLEYSGSPTEKA 548
Query: 514 ILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASC 573
IL W VKLGM F+ RS++++LH FPFNSEKKRGGVAVK + EVHVHWKGA+E++LASC
Sbjct: 549 ILGWGVKLGMNFETARSQSSILHAFPFNSEKKRGGVAVKTADGEVHVHWKGASEIVLASC 608
Query: 574 TKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFI----------LDKWTLP 622
Y+D DG + + D+ FFK +++MA R+LRCVA+A+R L KW LP
Sbjct: 609 RSYIDEDGNVAPMTDDKASFFKNGINDMAGRTLRCVALAFRTYEAEKVPTGEELSKWVLP 668
Query: 623 EEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE 682
E++LILLAIVGIKDPCRPGVKD+V LC++AGVKVRMVTGDN+QTA+AIALECGIL SDA+
Sbjct: 669 EDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIALECGILSSDAD 728
Query: 683 ANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKXXXXXXXXXXXXN 742
++P +IEGK FR ++D ER+K++ +I+VMGRSSPNDKLLLVQ+LR+ N
Sbjct: 729 LSEPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQGHVVAVTGDGTN 788
Query: 743 DAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQL 802
DAPALHEADIGLAMGI GTEVAKE+SDIIILDDNFASVVKVVRWGRSV+ANIQKFIQFQL
Sbjct: 789 DAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQL 848
Query: 803 TXXXXXXXXXXXXXXSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRK 862
T SSGDVPL AVQLLWVNLIMDTLGALALATEPPTDHLM R PVGRK
Sbjct: 849 TVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGRK 908
Query: 863 EPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQ 922
EPLITNIMWRNL++QA+YQV+VLL LNF+G SIL LE E +HA+ VKNT+IFNAFVL Q
Sbjct: 909 EPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFVLCQ 968
Query: 923 IFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLAS 982
FNEFNARKPDE N+F GV KN LFMGII IT VLQ+II+EFLGKF T KL+WK WL
Sbjct: 969 AFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVIIVEFLGKFASTTKLNWKQWLIC 1028
Query: 983 IGIGLFSWPLAVLGKMIPVPKTPLA 1007
+GIG+ SWPLA++GK IPVP P++
Sbjct: 1029 VGIGVISWPLALVGKFIPVPAAPIS 1053
|
|
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2267 (803.1 bits), Expect = 4.4e-235, P = 4.4e-235
Identities = 476/926 (51%), Positives = 621/926 (67%)
Query: 94 VKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDXXXXXXX 153
V+G++ L+TN KGI G++ ++S RR+ FGSNTY + L F++EA++D
Sbjct: 111 VEGVAASLRTNPTKGIHGNEQEVSRRRDLFGSNTYHKPPPKGLLFFVYEAFKDLTILILL 170
Query: 154 XXXXXXXXXXXKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQL 213
K G++EGWY+G SI AVFLVIVV+A+S++RQ QF L+K NI++
Sbjct: 171 VCAIFSLGFGIKEHGIKEGWYEGGSIFVAVFLVIVVSALSNFRQERQFDKLSKISNNIKV 230
Query: 214 EAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDH 273
E +R + ISIFDVVVG++V L+IGDQ+PADG+ + GHSL +DESSMTGES + DH
Sbjct: 231 EVLRDSRRQHISIFDVVVGDVVFLKIGDQIPADGLFLEGHSLQVDESSMTGESDHLEVDH 290
Query: 274 K-TPFLMSGCKVADXXXXXXXXXXXINTEWGLLMASISEDNGEETPLQVRLNGVATFIGI 332
K PFL SG K+ D ++T WG M+SI++D+ E TPLQVRL+ + + IG
Sbjct: 291 KDNPFLFSGTKIVDGFAQMLVVSVGMSTTWGQTMSSINQDSSERTPLQVRLDTLTSTIGK 350
Query: 333 XXXXXXXXXXXXXXXXXXTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQV 392
TG+T KE G + +T V V+ V++IV A V
Sbjct: 351 IGLTVAALVLVVLLVRYFTGNTEKE-GKREYNGSKTPVDTVVNSVVRIVAAA-------V 402
Query: 393 TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNE 452
TIVVVA+PEGLPLAVTLTLAYSM++MM+D+A+VR+LSACETMGSAT IC+DKTGTLTLNE
Sbjct: 403 TIVVVAIPEGLPLAVTLTLAYSMKRMMSDQAMVRKLSACETMGSATVICTDKTGTLTLNE 462
Query: 453 MTVVEAFIGRKKINPPDDSSQMHSI-VIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTE 511
M V + ++G++ I+ +DS++M S V+ LL +G NTTG+V V G E SGSPTE
Sbjct: 463 MKVTKFWLGQESIH--EDSTKMISPDVLDLLYQGTGLNTTGSVCVSDSGSTPEFSGSPTE 520
Query: 512 KAILSWAV-KLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKR-INSEVHVHWKGAAEMI 569
KA+LSW V LGM + V+ + VL V F+S KKR GV V+R ++ VHVHWKGAAEM+
Sbjct: 521 KALLSWTVLNLGMDMESVKQKHEVLRVETFSSAKKRSGVLVRRKSDNTVHVHWKGAAEMV 580
Query: 570 LASCTKYLDTDGQLQSIDGD-EDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELIL 628
LA C+ Y + G + +D + +A + MAA SLRC+A A++ + L E+ L L
Sbjct: 581 LAMCSHYYTSTGSVDLMDSTAKSRIQAIIQGMAASSLRCIAFAHKIASNDSVLEEDGLTL 640
Query: 629 LAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNI 688
+ IVG+KDPCRPGV AV+ C+ AGV ++M+TGDN+ TAKAIA ECGIL + + + +
Sbjct: 641 MGIVGLKDPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAIAFECGILDHNDKDEEDAV 700
Query: 689 IEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKXXXXXXXXXXXXNDAPALH 748
+EG FR +D+ER + +I VM RSSP+DKLL+V+ LR NDAPAL
Sbjct: 701 VEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGHVVAVTGDGTNDAPALK 760
Query: 749 EADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTXXXXX 808
EADIGL+MGIQGTEVAKE+SDI+ILDDNFASV V++WGR V+ NIQKFIQFQLT
Sbjct: 761 EADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAA 820
Query: 809 XXXXXXXXXSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITN 868
S+G+VPL AVQLLWVNLIMDTLGALALATE PT+ L+ R PVGR E LITN
Sbjct: 821 LVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNELLKRKPVGRTEALITN 880
Query: 869 IMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFN 928
+MWRNL+VQ+LYQ+ VLL+L FKG SI + E VK+T+IFN FVL Q+FNEFN
Sbjct: 881 VMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKE-------VKDTLIFNTFVLCQVFNEFN 933
Query: 929 ARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLD-WKLWLASIGIGL 987
AR+ ++ NVF G+ +N LF+GII IT VLQ+I++EFL KF TV+L+ W+ W I +
Sbjct: 934 AREMEKKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGWQ-WGTCIALAS 992
Query: 988 FSWPLAVLGKMIPVPKTPLAVYFVRP 1013
SWP+ K IPV +TP YF P
Sbjct: 993 LSWPIGFFTKFIPVSETPFLSYFKNP 1018
|
|
| TAIR|locus:2084578 AT3G22910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2198 (778.8 bits), Expect = 8.9e-228, P = 8.9e-228
Identities = 468/916 (51%), Positives = 607/916 (66%)
Query: 96 GLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDXXXXXXXXX 155
GL LK+N GI+ + ++ RR++FGSNTY + + +F+ EA++D
Sbjct: 108 GLVSALKSNTRLGINEEGDEIQRRRSTFGSNTYTRQPSKGLFHFVVEAFKDLTILILLGC 167
Query: 156 XXXXXXXXXKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEA 215
K G++EGWYDG SI AVFLV+ V+A+S++RQ+ QF L+K NI+++
Sbjct: 168 ATLSLGFGIKEHGLKEGWYDGGSIFVAVFLVVAVSAVSNFRQNRQFDKLSKVSSNIKIDV 227
Query: 216 MRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHK- 274
+R G+ +ISIFD+VVG+IV L IGDQVPADGV V GH L +DESSMTGES V
Sbjct: 228 VRNGRRQEISIFDIVVGDIVCLNIGDQVPADGVFVEGHLLHVDESSMTGESDHVEVSLTG 287
Query: 275 TPFLMSGCKVADXXXXXXXXXXXINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIXX 334
FL SG K+AD +NT WG +M+ IS D E+TPLQ RL+ + + IG
Sbjct: 288 NTFLFSGTKIADGFGKMAVTSVGMNTAWGQMMSHISRDTNEQTPLQSRLDKLTSSIGKVG 347
Query: 335 XXXXXXXXXXXXXXXXTGHTTKEDGSSAFVKGRTSVSDA-VDGVIKIVTIATNSRAIQVT 393
TG TTK++ + G+T+ SD V+ V+K+V A VT
Sbjct: 348 LLVAFLVLLVLLIRYFTG-TTKDESGNREYNGKTTKSDEIVNAVVKMVAAA-------VT 399
Query: 394 IVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEM 453
I+VVA+PEGLPLAVTLTLAYSM++MM D A+VR+LSACETMGSAT IC+DKTGTLTLN+M
Sbjct: 400 IIVVAIPEGLPLAVTLTLAYSMKRMMKDNAMVRKLSACETMGSATVICTDKTGTLTLNQM 459
Query: 454 TVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKA 513
V + + G + +S + V+ L +G+A NTTG+VF K G E SGSPTEKA
Sbjct: 460 KVTDFWFGLES----GKASSVSQRVVELFHQGVAMNTTGSVFKAKAGTEYEFSGSPTEKA 515
Query: 514 ILSWAVK-LGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKR--INSEVHV-HWKGAAEMI 569
ILSWAV+ L M ++V E V+HV FNSEKKR GV +K+ +N+E +V HWKGAAE I
Sbjct: 516 ILSWAVEELEMGMEKVIEEHDVVHVEGFNSEKKRSGVLMKKKGVNTENNVVHWKGAAEKI 575
Query: 570 LASCTKYLDTDGQLQSIDGDEDF-FKAAVDEMAARSLRCVAIAY-RFILDKWTLPEEELI 627
LA C+ + D G ++ + D+ F+ + MAA+SLRC+A AY D L EE+L
Sbjct: 576 LAMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAAKSLRCIAFAYSEDNEDNKKLKEEKLS 635
Query: 628 LLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPN 687
LL I+GIKDPCRPGVK AV+ C+ AGV ++M+TGDN+ TA+AIA+ECGIL + E N
Sbjct: 636 LLGIIGIKDPCRPGVKKAVEDCQFAGVNIKMITGDNIFTARAIAVECGILTPEDEMNSEA 695
Query: 688 IIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKXXXXXXXXXXXXNDAPAL 747
++EG+ FR + +ER + + I VM RSSP DKLL+V+ L++ NDAPAL
Sbjct: 696 VLEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAPAL 755
Query: 748 HEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTXXXX 807
EADIGL+MGIQGTEVAKE+SDI+ILDDNFASV V++WGR V+ NIQKFIQFQLT
Sbjct: 756 KEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVA 815
Query: 808 XXXXXXXXXXSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLIT 867
S+GDVPL AVQLLWVNLIMDTLGALALATE PT+ LM + P+GR PLIT
Sbjct: 816 ALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPTNDLMKKKPIGRVAPLIT 875
Query: 868 NIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEF 927
NIMWRNL+ QA YQ++VLLVL F+G SI ++ E+ VKNT+IFN FVL Q+FNEF
Sbjct: 876 NIMWRNLLAQAFYQISVLLVLQFRGRSIFNVT-EK------VKNTLIFNTFVLCQVFNEF 928
Query: 928 NARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGL 987
NAR ++ NVF G+ KN LF+GII +T VLQ++++EFL +F T +L+ W I I
Sbjct: 929 NARSLEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLGQWGVCIAIAA 988
Query: 988 FSWPLAVLGKMIPVPK 1003
SWP+ L K +PVP+
Sbjct: 989 ASWPIGWLVKSVPVPE 1004
|
|
| TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1467 (521.5 bits), Expect = 1.4e-208, Sum P(3) = 1.4e-208
Identities = 320/624 (51%), Positives = 408/624 (65%)
Query: 389 AIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTL 448
AI VTIVVVAVPEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSATTICSDKTGTL
Sbjct: 401 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTL 460
Query: 449 TLNEMTVVEAFIGRKKINPPDDSSQMHSIV----IYLLSEGIAQNTTGNVFVPKDGEAVE 504
T N MTVV++ I + SS + S + + LL + I NT G V V + G+ E
Sbjct: 461 TTNHMTVVKSCICMNVQDVASKSSSLQSDIPEAALKLLLQLIFNNTGGEVVVNERGKT-E 519
Query: 505 VSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINS-EVHVHWK 563
+ G+PTE AIL + LG KF R V+ V PFNS KKR GV ++ + H K
Sbjct: 520 ILGTPTETAILELGLSLGGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTK 579
Query: 564 GAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKWT-- 620
GA+E++LA+C K +++ G++ +D + F +DE A +LR + +AY I ++
Sbjct: 580 GASEIVLAACDKVINSSGEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSAD 639
Query: 621 --LPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILG 678
+PE+ + IVGIKDP RPGV+++V+LCR AG+ VRMVTGDN+ TAKAIA ECGIL
Sbjct: 640 EGIPEKGFTCIGIVGIKDPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILT 699
Query: 679 SDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKXXXXXXXXX 738
D A IEG VFR + +E ++ +I VM RSSP DK LV+ LR
Sbjct: 700 DDGIA-----IEGPVFREKNQEEMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVT 754
Query: 739 XX-XNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKF 797
NDAPALHEADIGLAMGI GTEVAKE +D+IILDDNF+++V V +WGRSV+ NIQKF
Sbjct: 755 GDGTNDAPALHEADIGLAMGIAGTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKF 814
Query: 798 IQFQLTXXXXXXXXXXXXXXSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRL 857
+QFQLT +G PL AVQLLWVN+IMDTLGALALATEPP + LM R+
Sbjct: 815 VQFQLTVNVVALIVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNNELMKRM 874
Query: 858 PVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNA 917
PVGR+ ITN MWRN++ QA+YQ ++ +L KG S+ L G ++ V NT+IFN
Sbjct: 875 PVGRRGNFITNAMWRNILGQAVYQFIIIWILQAKGKSMFGLVGS---DSTLVLNTLIFNC 931
Query: 918 FVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWK 977
FV Q+FNE ++R+ +EI+VF G+ NY+F+ +IG T QIIIIEFLG F T L
Sbjct: 932 FVFCQVFNEVSSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTIV 991
Query: 978 LWLASIGIGLFSWPLAVLGKMIPV 1001
W SI +G P+A K IPV
Sbjct: 992 QWFFSIFVGFLGMPIAAGLKKIPV 1015
|
|
| TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1918 (680.2 bits), Expect = 7.1e-204, Sum P(2) = 7.1e-204
Identities = 434/920 (47%), Positives = 568/920 (61%)
Query: 94 VKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDXXXXXXX 153
V GL+ LK + G+S + LS R+ FG N + + R F F+WEA QD
Sbjct: 119 VDGLAGKLKASPTDGLSTEAAQLSQRQELFGINKFAESEMRGFWVFVWEALQDMTLMILG 178
Query: 154 XXXXXXXXXXXKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQL 213
TEG +G +DG IA ++ LV+ VTA SDYRQSLQF++L+KEK+ I +
Sbjct: 179 VCAFVSLIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDYRQSLQFRDLDKEKKKITV 238
Query: 214 EAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDH 273
+ R G K+SI+D++ G+IV L IGDQVPADG+ ++G S+ IDESS+TGES+ V +
Sbjct: 239 QVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVNA 298
Query: 274 KTPFLMSGCKVADXXXXXXXXXXXINTEWGLLMASISEDNGEETPLQVRLNGVATFIG-I 332
+ PFLMSG KV D + T+WG LMA+++E +ETPLQV+LNGVAT IG I
Sbjct: 299 QNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDETPLQVKLNGVATIIGKI 358
Query: 333 XXXXXXXXXXXXXXXXXXTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQV 392
+T G+ G D ++++ AI V
Sbjct: 359 GLFFAVVTFAVLVQGMFMRKLST---GTHWVWSG--------DEALELLEYF----AIAV 403
Query: 393 TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNE 452
TIVVVAVPEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSATTICSDKTGTLT N
Sbjct: 404 TIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNH 463
Query: 453 MTVVEAFIGRKKINPPDDSSQMHSIV----IYLLSEGIAQNTTGNVFVPKDGEAVEVSGS 508
MTVV++ I + + S + S + + LL + I NT G V V K G+ E+ G+
Sbjct: 464 MTVVKSCICMNVQDVANKGSSLQSEIPESAVKLLIQSIFNNTGGEVVVNKHGKT-ELLGT 522
Query: 509 PTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINS-EVHVHWKGAAE 567
PTE AIL + LG KF R V+ V PFNS KKR GV ++ + H KGA+E
Sbjct: 523 PTETAILELGLSLGGKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASE 582
Query: 568 MILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKWT----LP 622
++LA+C K +++ G++ +D + + ++E A +LR + +AY I ++ +P
Sbjct: 583 IVLAACDKVVNSSGEVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIP 642
Query: 623 EEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE 682
+ IVGIKDP RPGVK++V+LCR AG+ VRMVTGDN+ TAKAIA ECGIL D
Sbjct: 643 ASGFTCVGIVGIKDPVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGI 702
Query: 683 ANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKXXXXXXXXXXX-X 741
A IEG VFR + +E ++ +I VM RSSP DK LV+ LR
Sbjct: 703 A-----IEGPVFREKNQEELLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGT 757
Query: 742 NDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQ 801
NDAPALHEADIGLAMGI GTEVAKE++D+IILDDNF+++V V +WGRSV+ NIQKF+QFQ
Sbjct: 758 NDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQ 817
Query: 802 LTXXXXXXXXXXXXXXSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGR 861
LT +G PL AVQLLWVN+IMDTLGALALATEPP D LM RLPVGR
Sbjct: 818 LTVNVVALVVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGR 877
Query: 862 KEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLS 921
+ ITN MWRN++ QA+YQ V+ +L KG ++ L+G ++ + NT+IFN FV
Sbjct: 878 RGNFITNAMWRNILGQAVYQFIVIWILQAKGKAMFGLDGP---DSTLMLNTLIFNCFVFC 934
Query: 922 QIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLA 981
Q+FNE ++R+ +EI+VF G+ NY+F+ +IG T QIIIIEFLG F T L W+
Sbjct: 935 QVFNEISSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTITQWIF 994
Query: 982 SIGIGLFSWPLAVLGKMIPV 1001
SI IG P+A K IPV
Sbjct: 995 SIFIGFLGMPIAAGLKTIPV 1014
|
|
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1930 (684.5 bits), Expect = 2.4e-203, Sum P(2) = 2.4e-203
Identities = 430/920 (46%), Positives = 571/920 (62%)
Query: 95 KGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDXXXXXXXX 154
+GL+E L T++ GIS + LS R+ +G N + R F F+WEA QD
Sbjct: 122 EGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILAA 181
Query: 155 XXXXXXXXXXKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLE 214
EG G +DG I ++ LV+ VTA SDYRQSLQF++L+ EK+ I ++
Sbjct: 182 CAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVVQ 241
Query: 215 AMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHK 274
R KISI+D++ G++V L IGDQ+PADG+ ++G S+ I+ESS+TGES+ V +
Sbjct: 242 VTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSVE 301
Query: 275 TPFLMSGCKVADXXXXXXXXXXXINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIXX 334
PFL+SG KV D + T+WG LMA++SE +ETPLQV+LNGVAT IG
Sbjct: 302 HPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIG 361
Query: 335 XXXXXXXXXXXXXXXXTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTI 394
K +S ++ +D + +++ +A VTI
Sbjct: 362 LFFAVITFAVLVQGLAN---QKRLDNSHWIW----TADELMAMLEYFAVA-------VTI 407
Query: 395 VVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMT 454
VVVAVPEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSATTICSDKTGTLT N MT
Sbjct: 408 VVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMT 467
Query: 455 VVEAFIGR--KKINPPDDSSQMHSIV----IYLLSEGIAQNTTGNVFVPKDGEAVEVSGS 508
VV+A I K++N PD + + S + + LL + I NT G + V K G E+ G+
Sbjct: 468 VVKACICEQAKEVNGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGK-GNKTEILGT 526
Query: 509 PTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEM 568
PTE A+L + + LG F VR + V+ V PFNS KKR GV ++ H KGA+E+
Sbjct: 527 PTETALLEFGLSLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEI 586
Query: 569 ILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKWTL----PE 623
+L SC KY++ DG++ +D K ++E A+ +LR + +AY I D+++L P
Sbjct: 587 VLDSCDKYINKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPS 646
Query: 624 EELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEA 683
+ IVGIKDP RPGVK++V +C+ AG+ VRMVTGDNL TAKAIA ECGIL D A
Sbjct: 647 GGYTCIGIVGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIA 706
Query: 684 NDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKXXXXXXXXXXX-XN 742
IEG FR SD+E K+ ++ VM RSSP DK LV+ LR N
Sbjct: 707 -----IEGPEFREKSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTN 761
Query: 743 DAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQL 802
DAPALHEADIGLAMGI GTEVAKE++D+IILDDNF+++V V +WGRSV+ NIQKF+QFQL
Sbjct: 762 DAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821
Query: 803 TXXXXXXXXXXXXXXSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRK 862
T +G+ PL AVQLLWVN+IMDTLGALALATEPP D LM R PVGRK
Sbjct: 822 TVNVVALIVNFLSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRK 881
Query: 863 EPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVK-NTMIFNAFVLS 921
I+N+MWRN++ Q+LYQ+ ++ L KG ++ L+G SD+ NT+IFN FV
Sbjct: 882 GNFISNVMWRNILGQSLYQLVIIWCLQTKGKTMFGLDGPD----SDLTLNTLIFNIFVFC 937
Query: 922 QIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLA 981
Q+FNE ++R+ ++I+VF G+ KNY+F+ ++ T V Q+IIIE LG F T L+ WL
Sbjct: 938 QVFNEISSREMEKIDVFKGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTPLNLGQWLV 997
Query: 982 SIGIGLFSWPLAVLGKMIPV 1001
SI +G P+A KMIPV
Sbjct: 998 SIILGFLGMPVAAALKMIPV 1017
|
|
| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1855 (658.1 bits), Expect = 7.7e-196, Sum P(2) = 7.7e-196
Identities = 411/921 (44%), Positives = 558/921 (60%)
Query: 89 AQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDXX 148
AQ V+ L++ + +L +GI + + R FG N Y K RSFL F+WEA D
Sbjct: 113 AQKGGVEELAKKVSVSLSEGIRSSEVPI--REKIFGENRYTEKPARSFLMFVWEALHDIT 170
Query: 149 XXXXXXXXXXXXXXXXKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEK 208
TEG G YDG I ++ LV++VTAISDY+QSLQF++L++EK
Sbjct: 171 LIILMVCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDREK 230
Query: 209 RNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKI 268
+ I ++ R G +ISI D+VVG++V L IGDQVPADG+ ++G++L IDESS++GES+
Sbjct: 231 KKIIVQVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEP 290
Query: 269 VRKDHKTPFLMSGCKVADXXXXXXXXXXXINTEWGLLMASISEDNGEETPLQVRLNGVAT 328
+ + PFL+SG KV + + TEWG LM ++ + +ETPLQV+LNGVAT
Sbjct: 291 SHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGVAT 350
Query: 329 FIGIXXXXXXXXXXXXXXXXXXTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSR 388
IG T S +F S DA+ T+ +
Sbjct: 351 IIGKIGLSFAVLTFVVLCIRFVLDKAT----SGSFTNW--SSEDAL-------TLL-DYF 396
Query: 389 AIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTL 448
AI VTI+VVAVPEGLPLAVTL+LA++M+K+M+D+ALVR L+ACETMGS+T IC+DKTGTL
Sbjct: 397 AISVTIIVVAVPEGLPLAVTLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTL 456
Query: 449 TLNEMTVVEAFIGRKKINPPDDSSQMHSI-----VIYLLSEGIAQNTTGNVFVPKDGEAV 503
T N M V + +I K + S + + V L +GI QNT V KDG
Sbjct: 457 TTNHMVVNKVWICDKVQERQEGSKESFELELSEEVQSTLLQGIFQNTGSEVVKDKDGNT- 515
Query: 504 EVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWK 563
++ GSPTE+AIL + + LG F+ R E +L + PFNS+KK+ V + K
Sbjct: 516 QILGSPTERAILEFGLLLGGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFCK 575
Query: 564 GAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILD--KWT 620
GA+E++L C +D++G+ + + ++ A+ +LR + + Y+ + +
Sbjct: 576 GASEIVLKMCENVVDSNGESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGE 635
Query: 621 LPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSD 680
LP+ ++A+VGIKDP RPGV++AV+ C+ AG+ VRMVTGDN+ TAKAIA ECGI
Sbjct: 636 LPDGGYTMVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEG 695
Query: 681 AEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKXXXXXXXXXXX 740
A IEG FR LS E + +I VM RS P DK LV LRK
Sbjct: 696 GLA-----IEGSEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLRKIGEVVAVTGDG 750
Query: 741 XNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQF 800
NDAPALHEADIGLAMGI GTEVAKEN+D+II+DDNF ++V V RWGR+V+ NIQKF+QF
Sbjct: 751 TNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQF 810
Query: 801 QLTXXXXXXXXXXXXXXSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVG 860
QLT +G PL AVQLLWVN+IMDTLGALALATEPP + LM R P+
Sbjct: 811 QLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIA 870
Query: 861 RKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVL 920
R IT MWRN+ Q++YQ+ VL +LNF G S+L L+G ++ V NT+IFN+FV
Sbjct: 871 RTASFITKTMWRNIAGQSVYQLIVLGILNFAGKSLLKLDGP---DSTAVLNTVIFNSFVF 927
Query: 921 SQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWL 980
Q+FNE N+R+ ++INVF G+ +++F ++ +T V Q+II+EFLG F TV L W+ WL
Sbjct: 928 CQVFNEINSREIEKINVFKGMFNSWVFTWVMTVTVVFQVIIVEFLGAFASTVPLSWQHWL 987
Query: 981 ASIGIGLFSWPLAVLGKMIPV 1001
SI IG + +AV+ K +PV
Sbjct: 988 LSILIGSLNMIVAVILKCVPV 1008
|
|
| TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1657 (588.4 bits), Expect = 3.6e-174, Sum P(2) = 3.6e-174
Identities = 365/811 (45%), Positives = 497/811 (61%)
Query: 95 KGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDXXXXXXXX 154
+G+++ + +L +G+ ++L R +G N Y K RSFL F+WEA QD
Sbjct: 119 EGIAQKVSVSLAEGVRS--SELHIREKIYGENRYTEKPARSFLTFVWEALQDITLIILMV 176
Query: 155 XXXXXXXXXXKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLE 214
TEG +G YDG I ++ LV++VTAISDY+QSLQF++L++EK+ I ++
Sbjct: 177 CAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQSLQFRDLDREKKKIIIQ 236
Query: 215 AMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHK 274
R G ++SI D+VVG++V L IGDQVPADG+ ++G++L IDESS++GES+ + +
Sbjct: 237 VTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNKE 296
Query: 275 TPFLMSGCKVADXXXXXXXXXXXINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIXX 334
PFL+SG KV + + TEWG LM ++SE +ETPLQV+LNGVAT IG
Sbjct: 297 KPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGEDETPLQVKLNGVATIIGKIG 356
Query: 335 XXXXXXXXXXXXXXXXTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTI 394
T GS S DA+ T+ + AI VTI
Sbjct: 357 LGFAVLTFVVLCIRFVVEKATA--GSIT----EWSSEDAL-------TLL-DYFAIAVTI 402
Query: 395 VVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMT 454
+VVAVPEGLPLAVTL+LA++M+++M+D+ALVR L+ACETMGS+T IC+DKTGTLT N M
Sbjct: 403 IVVAVPEGLPLAVTLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMV 462
Query: 455 VVEAFIGRKKINPPDDSSQMH--SIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEK 512
V + +I +++ Q++ V +L + I QNT V K+G+ ++ GSPTE+
Sbjct: 463 VNKVWICENIKERQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKT-QILGSPTER 521
Query: 513 AILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILAS 572
AIL + + LG D R E +L + PFNS+KK+ V +V KGA+E++L
Sbjct: 522 AILEFGLLLGGDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGASEIVLKM 581
Query: 573 CTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILD--KWTLPEEELILL 629
C K +D++G+ + ++ ++ A+ +LR + + Y + + + LP L+
Sbjct: 582 CEKVVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGDLPNGGYTLV 641
Query: 630 AIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNII 689
A+VGIKDP RPGV++AV+ C+ AG+ VRMVTGDN+ TAKAIA ECGIL + A I
Sbjct: 642 AVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVA-----I 696
Query: 690 EGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKXXXXXXXXXXXXNDAPALHE 749
EG FR L E + +I VM RS P DK LV LRK NDAPALHE
Sbjct: 697 EGSDFRNLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRKMGEVVAVTGDGTNDAPALHE 756
Query: 750 ADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTXXXXXX 809
ADIGLAMGI GTEVAKEN+D+II+DDNFA++V V +WGR+V+ NIQKF+QFQLT
Sbjct: 757 ADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVAL 816
Query: 810 XXXXXXXXSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNI 869
+G PL AVQLLWVN+IMDTLGALALATEPP + LM R P+GR IT
Sbjct: 817 IINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRA 876
Query: 870 MWRNLIVQALYQVTVLLVLNFKGTSILHLEG 900
MWRN+I Q++YQ+ VL +LNF G IL+L G
Sbjct: 877 MWRNIIGQSIYQLIVLGILNFAGKQILNLNG 907
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LU41 | ACA9_ARATH | 3, ., 6, ., 3, ., 8 | 0.7090 | 0.9931 | 0.9355 | yes | no |
| O34431 | ATCL_BACSU | 3, ., 6, ., 3, ., 8 | 0.3117 | 0.8064 | 0.9269 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pg.C_LG_VIII000059 | autoinhibited calcium ATPase (1094 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1023 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-135 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-123 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-109 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 7e-96 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-86 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 6e-70 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 6e-59 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 5e-50 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-49 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 5e-45 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-33 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 3e-31 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-30 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-27 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 5e-27 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 9e-26 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-24 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 3e-24 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 3e-23 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 5e-23 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-19 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 5e-19 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 6e-17 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 1e-16 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 4e-16 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 4e-16 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-14 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 7e-14 | |
| pfam12515 | 47 | pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoi | 3e-13 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 1e-11 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-11 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-09 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 2e-06 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 3e-06 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 3e-04 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 3e-04 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 4e-04 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.002 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 0.004 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 970 bits (2510), Expect = 0.0
Identities = 433/922 (46%), Positives = 584/922 (63%), Gaps = 35/922 (3%)
Query: 93 RVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIIL 152
+G++ LKT+L +G+ + L R +G N P K +SFL +W A D TLI+L
Sbjct: 44 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILL 103
Query: 153 IVAAIASLALGIK-----TEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKE 207
VAA+ SL LG+ E GW +G +I +V LV++VTA++DY++ LQF+ LN+E
Sbjct: 104 SVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNRE 163
Query: 208 KRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESK 267
K ++ +RGG+ +ISI D+VVG+IV L GD VPADGV ++G SL IDESS+TGES
Sbjct: 164 KSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESD 223
Query: 268 IVRKDH-KTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGV 326
++K + PFL+SG V +G G M+VT VG+N+ G LM + + + TPLQ +L+ +
Sbjct: 224 PIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSEL 283
Query: 327 ATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATN 386
A IG G+ A L+ VL +R+ R D D T +
Sbjct: 284 AGLIGKFGMGSAVLLFLVLSLRYVF---------------RIIRGDGRDTEEDAQTF-LD 327
Query: 387 SRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTG 446
I VTIVVVAVPEGLPLAVT+ LAYSM+KMM D LVR L+ACETMGSAT ICSDKTG
Sbjct: 328 HFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTG 387
Query: 447 TLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVS 506
TLT N M+VV+ +IG ++ N D + V +L EGI+ N++ V + G+
Sbjct: 388 TLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKR-AFI 446
Query: 507 GSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAA 566
GS TE A+L + + L + VR+E V+ ++PFNSE+K V VK + KGA+
Sbjct: 447 GSKTECALLDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGAS 506
Query: 567 EMILASCTKYLDTDGQLQSI-DGDEDFFKAAVDEMAARSLRCVAIAYRFI----LDKWTL 621
E++L C K LD++G+ I D D+D ++ +A+ +LR + +AYR +
Sbjct: 507 EIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDY 566
Query: 622 PEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDA 681
P + L L+ +VGIKDP RPGV++AV+ C+ AG+ VRMVTGDN+ TAKAIA CGIL
Sbjct: 567 PNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG 626
Query: 682 EANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGT 741
A EGK FR+L +E + + ++ V+ RSSP DK LLV L+ G+VVAVTGDGT
Sbjct: 627 LAM-----EGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGT 681
Query: 742 NDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQ 801
NDAPAL AD+G +MGI GTEVAKE SDII+LDDNFAS+V+ V+WGR+V+ NI+KF+QFQ
Sbjct: 682 NDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQ 741
Query: 802 LTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGR 861
LTVNV A+++ V + S PL AVQLLWVNLIMDTL ALALATEPPT+ L+ R P+GR
Sbjct: 742 LTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGR 801
Query: 862 KEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERR--QHASDVKNTMIFNAFV 919
PLI+ MW+N++ QA YQ+ V +L F G SI + G H NT++FN FV
Sbjct: 802 NAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFV 861
Query: 920 LSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLW 979
L Q+FNE NARK E NVF G+ KN +F+ I+G T Q+II+EF G F TV L + W
Sbjct: 862 LLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQW 921
Query: 980 LASIGIGLFSWPLAVLGKMIPV 1001
+ + +G+ S VL ++IPV
Sbjct: 922 IGCVLLGMLSLIFGVLLRLIPV 943
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 612 bits (1580), Expect = 0.0
Identities = 302/929 (32%), Positives = 453/929 (48%), Gaps = 78/929 (8%)
Query: 88 HAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDL 147
H + L L T+ G+S ++ R +G N P +K RS L ++D
Sbjct: 24 HPLSVERNELLLELFTSPTTGLSEEEVK--RRLKKYGPNELPEEKKRSLLKKFLRQFKDP 81
Query: 148 TLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKE 207
+I+L+VAA+ S +G + D I V + ++ + +YR + L K
Sbjct: 82 FIILLLVAALLSAFVGD----WVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKM 137
Query: 208 KRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESK 267
+ + +R GK V+I ++V G+IV L GD VPAD L+ L +DES++TGES
Sbjct: 138 SSP-KAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESL 196
Query: 268 IVRKDH-------------KTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNG 314
V K + L SG V G +V G TE+G + +
Sbjct: 197 PVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKE 256
Query: 315 EETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAV 374
+TPLQ +LN + F+ ++ L L V +V F G
Sbjct: 257 VKTPLQRKLNKLGKFLLVLAL---VLGALVFVVGLFRGG--------------------- 292
Query: 375 DGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETM 434
+G+++ A + + V AVPEGLP VT+ LA ++M D A+VR L+A ET+
Sbjct: 293 NGLLESFLTA-------LALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETL 345
Query: 435 GSATTICSDKTGTLTLNEMTVVEAFI--GRKKINPPDDSSQMHSIVIYLLSEGIAQNTTG 492
GS ICSDKTGTLT N+MTV + +I G K I+ D + L +
Sbjct: 346 GSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAA------ALC 399
Query: 493 NVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDR--VRSETTVLHVFPFNSEKKRGGVA 550
N P+ +G PTE A++ +A KLG D + E +L PF+SE+KR V
Sbjct: 400 NSVTPEKNG-WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVI 458
Query: 551 VKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAI 610
VK + + KGA E+IL C L + AV E+A+ LR +A+
Sbjct: 459 VKTDEGKYILFVKGAPEVILERCKSI-GELEPLTEEGLRT--LEEAVKELASEGLRVLAV 515
Query: 611 AYRFI-----LDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQ 665
AY+ + D+ E +L+ L + GI+DP R VK+A++ R+AG+KV M+TGD+++
Sbjct: 516 AYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVE 575
Query: 666 TAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQ 725
TA AIA ECGI A +I+G ALSD+E ++ +E++V R SP K +V+
Sbjct: 576 TAIAIAKECGIEAEAESAL---VIDGAELDALSDEELAELVEELSVFARVSPEQKARIVE 632
Query: 726 ALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785
AL+K G VVA+TGDG NDAPAL AD+G+AMG +GT+ AKE +DI++LDDNFA++V V
Sbjct: 633 ALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVV 692
Query: 786 WGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDV-PLNAVQLLWVNLIMDTLGALAL 844
GR V+ NI+KFI + L+ NV +L ++ ++ + PL +QLLW+NL+ D+L ALAL
Sbjct: 693 EGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALAL 752
Query: 845 ATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQ 904
E P +M R P G +E L ++ I+ +L +L F + +
Sbjct: 753 GVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGL 812
Query: 905 HASDVK-NTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIE 963
T F VL Q+ R + + + N + + +LQ++II
Sbjct: 813 DLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIF 872
Query: 964 F---LGKFTKTVKLDWKLWLASIGIGLFS 989
K + L WL +I + L
Sbjct: 873 LPPLNLKIFQPTPLSLFEWLIAIAVALLL 901
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 428 bits (1103), Expect = e-135
Identities = 284/921 (30%), Positives = 456/921 (49%), Gaps = 103/921 (11%)
Query: 99 ELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRS-FLNFLWEAWQDLTLIILIVAAI 157
L+T+L+ G++ + S+RR G N + +++ S + FL + ++ +++LI +A+
Sbjct: 14 SKLQTDLQNGLNSSQ-EASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAV 72
Query: 158 ASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMR 217
S+ +G D SI A+ +V+ V + +YR + LNK + +R
Sbjct: 73 ISVFMG--------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPP-ECHLIR 123
Query: 218 GGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKD----H 273
GK + +V G++V L +GD+VPAD +V L+IDES++TGE+ V K
Sbjct: 124 EGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIP 183
Query: 274 KTPFL---------MSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLN 324
G V G G +V G G NTE+G + + +TPLQ ++
Sbjct: 184 AATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMD 243
Query: 325 GVATFIGIVGLAVAFLVLAVL-LVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTI 383
+ + +V +F V+ V+ LV +F G +++ TI
Sbjct: 244 LLGKQLSLV----SFGVIGVICLVGWFQGKD----------------------WLEMFTI 277
Query: 384 ATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSD 443
+ V++ V A+PEGLP+ VT+TLA + +M +A+VR+L + ET+GS ICSD
Sbjct: 278 S-------VSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSD 330
Query: 444 KTGTLTLNEMTVVEAF--------IGRKKINPPDDSSQMHSIVIYLLSEGIAQN-TTGNV 494
KTGTLT N MTV + + + +N + ++ + +++ GN+
Sbjct: 331 KTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNL 390
Query: 495 F--VPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVK 552
EA + G+PT+ A++ +K G+ D +R + PF+SE+K V
Sbjct: 391 CNNAKFRNEADTLLGNPTDVALIELLMKFGL--DDLRETYIRVAEVPFSSERKWMAVKCV 448
Query: 553 -RINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAI 610
R + KGA E +L CT Y DG+ ++ + D + EMA+ LR +A
Sbjct: 449 HRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAF 508
Query: 611 AYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAI 670
A +L L +VGI DP RPGVK+AV GV++ M+TGD+ +TA +I
Sbjct: 509 ASGPEKG-------QLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSI 561
Query: 671 ALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKG 730
A G+ + + G+ A+ D++ ++ ++ V R+SP K+ +V+AL+K
Sbjct: 562 ARRLGM-----PSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKR 616
Query: 731 GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSV 790
GDVVA+TGDG NDAPAL ADIG+AMG GT+VAKE +D+I+ DD+FA+++ + G+ +
Sbjct: 617 GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGI 676
Query: 791 FANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPT 850
F NI+ FI FQL+ +VAAL + +A + PLNA+Q+LW+N++MD A +L EP
Sbjct: 677 FNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVD 736
Query: 851 DHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVK 910
+M + P R + ++T + + ++V A+ V L + + E + +
Sbjct: 737 KDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVR---------EMQDGVITAR 787
Query: 911 N-TMIFNAFVLSQIFNEFNARKPD----EINVFTGVTKNYLFMG-IIGITCVLQIIIIEF 964
+ TM F FV +FN R EI F+ NY G IIG V I
Sbjct: 788 DTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLV---IYFPP 844
Query: 965 LGKFTKTVKLDWKLWLASIGI 985
L +T L K L + I
Sbjct: 845 LQSVFQTEALSIKDLLFLLLI 865
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 398 bits (1024), Expect = e-123
Identities = 271/938 (28%), Positives = 415/938 (44%), Gaps = 129/938 (13%)
Query: 142 EAWQDLTLIILIVAAIASLALGIKTEGVE--EGWYDGASIAFAVFLVIVVTAISDYRQSL 199
E ++DL + IL++AA S L EG E + + F + L++V AI Q
Sbjct: 3 EQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVE----PFVILLILVANAIVGVWQER 58
Query: 200 QFQNLNKEKRNIQLE---AMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLA 256
+ + + + E +R G+ I D+V G+IV L +GD+VPAD +++ +L
Sbjct: 59 NAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLR 118
Query: 257 IDESSMTGESKIVRK------------DHKTPFLMSGCKVADGVGTMMVTGVGINTEWGL 304
+D+S +TGES V K K L SG V G +V G++TE G
Sbjct: 119 VDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGK 178
Query: 305 LMASISEDNGEETPLQVRLN--GVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSA 362
+ + E+TPLQ +L+ G ++GL + LV + + F G
Sbjct: 179 IRDEMRAAEQEDTPLQKKLDEFGEL-LSKVIGL-ICILVWVINIGHFNDPAL----GGGW 232
Query: 363 FVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADK 422
A I V + V A+PEGLP +T LA RKM
Sbjct: 233 IQG------------------AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKN 274
Query: 423 ALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSI----- 477
A+VR+L + ET+G T ICSDKTGTLT N+M+V + ++P S +
Sbjct: 275 AIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVA----LDPSSSSLNEFCVTGTTY 330
Query: 478 ---------------VIYLLSEGIAQNTT----GNVFVPKDGEAVEVSGSPTEKAILSWA 518
E +A ++ + E G TE A+
Sbjct: 331 APEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLV 390
Query: 519 VKLGMKFDRVRSETTVLHVFPFNSEKK--------------RGGVAVKRINSEVHVHW-K 563
K+G+ + + NS R ++V S + + K
Sbjct: 391 EKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVK 450
Query: 564 GAAEMILASCTKYLDTDGQLQSI-DGDEDFFKAAVDEMAAR-SLRCVAIAYRFILDKWTL 621
GA E +L CT L+ DG+ + D ++ + + EM +LRC+A+A++ I D
Sbjct: 451 GAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE 510
Query: 622 P-----------EEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAI 670
E +L + +VG+ DP RP V DA++ CR AG++V M+TGDN +TA+AI
Sbjct: 511 DLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAI 570
Query: 671 ALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKG 730
GI D E G+ F + ++ + + R P+ K LV+ L++
Sbjct: 571 CRRIGIFSPD-EDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ 629
Query: 731 GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSV 790
G++VA+TGDG NDAPAL +ADIG+AMG GTEVAKE SD+++ DDNFA++V V GR++
Sbjct: 630 GEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAI 688
Query: 791 FANIQKFIQFQLTVN---VAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATE 847
+ N+++FI++ ++ N V + + I G L VQLLWVNL+ D L A AL
Sbjct: 689 YNNMKQFIRYMISSNIGEVVCIFLTAALGIPEG---LIPVQLLWVNLVTDGLPATALGFN 745
Query: 848 PPTDHLMHRLPVGRKEPLITN-IMWRNLIVQ---ALYQVTVLL--VLNFKGTSILHLEGE 901
PP +M + P EPLIT + +R L+V L V + L T
Sbjct: 746 PPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFT 805
Query: 902 RRQHASDVK----------NTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGII 951
D T+ + V+ ++FN NA D+ + N +G I
Sbjct: 806 TCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAI 865
Query: 952 GITCVLQIII--IEFLGKFTKTVKLDWKLWLASIGIGL 987
++ L +I + FL + L WL + + L
Sbjct: 866 CLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSL 903
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 350 bits (899), Expect = e-109
Identities = 200/681 (29%), Positives = 307/681 (45%), Gaps = 152/681 (22%)
Query: 178 SIAFAVFL-VIVVTAI----SDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVG 232
I F V + V++V D +SL + +N + R G +I D+V G
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVL----RNGW-KEIPAKDLVPG 55
Query: 233 EIVPLRIGDQVPADGVLVTGHSLAIDESSMTGES----KIVRKDHKTPFL-----MSGCK 283
++V ++ G+ VPADGVL++G S +DES++TGES K K+ ++ + +G
Sbjct: 56 DVVLVKSGETVPADGVLLSG-SCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTY 114
Query: 284 VADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLA 343
V G ++VT GI T G + + TPLQ + + + FI I+ L + L +
Sbjct: 115 VFGGTLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVF 174
Query: 344 VLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGL 403
+ L + K + A + ++V+ VP L
Sbjct: 175 LYLFIRGWDPNSIF---------------------KALLRA-------LIVLVIVVPPAL 206
Query: 404 PLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRK 463
P AVT+ LA ++ LVR L+A E +G +CSDKTGTLT N+MT+ +I
Sbjct: 207 PAAVTVALAVGDARLAKKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGG 266
Query: 464 KINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGM 523
K + + +SG P EKA+L A +G
Sbjct: 267 KEDNS--------------------------SSLVACDNNYLSGDPMEKALLKSAELVG- 299
Query: 524 KFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQL 583
K D+ E +L VFPF+S KR V V+ + + KGA E IL C Y
Sbjct: 300 KADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNNY------- 352
Query: 584 QSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVK 643
+ E+A + LR +A A + + D L ++ +DP RP K
Sbjct: 353 ----------EEKYLELARQGLRVLAFASKELEDDLE-------FLGLITFEDPLRPDAK 395
Query: 644 DAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKERE 703
+ ++ + AG+KV M+TGDN+ TAKAIA E G
Sbjct: 396 ETIEELKAAGIKVVMITGDNVLTAKAIAKELG---------------------------- 427
Query: 704 KVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV 763
I V R SP KL +V+AL+K G +VA+TGDG NDAPAL +AD+G+AMG
Sbjct: 428 -----IDVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG------ 476
Query: 764 AKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVP 823
AK +DI++LDD+ +++VK V+ GR +F+NI+ I + + N+ + + ++ +
Sbjct: 477 AKAAADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIV------ 530
Query: 824 LNAVQLLWVNLIMDTLGALAL 844
+ L++ L ALAL
Sbjct: 531 --------IILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 325 bits (836), Expect = 7e-96
Identities = 254/886 (28%), Positives = 411/886 (46%), Gaps = 131/886 (14%)
Query: 73 KKEEEKEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTY-PLK 131
KK+ + ++ ++ + + + L T+L KG+S R+ G N P
Sbjct: 1 KKKRDLDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARD--GPNALTPPP 58
Query: 132 KGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTA 191
++ F + + ++++ I A + LA GI+ EE D + + V+++T
Sbjct: 59 TTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITG 118
Query: 192 ISDYRQSLQFQNLNKEKRNI---QLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGV 248
Y Q + + + +N+ Q +R G+ + I+ VVVG++V ++ GD++PAD
Sbjct: 119 CFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLR 178
Query: 249 LVTGHSLAIDESSMTGESKIVRKD----HKTP-------FLMSGCKVADGVGTMMVTGVG 297
+++ +D SS+TGES+ + H+ P F + C +G +V G
Sbjct: 179 IISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNC--VEGTARGIVVNTG 236
Query: 298 INTEWGLLMASISEDNGEETPLQVRLN-------GVATFIGIVGLAVAFLVLAVLLVRFF 350
T G + + S +TP+ + + GVA F+G V+F +L+++L
Sbjct: 237 DRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLG-----VSFFILSLIL---- 287
Query: 351 TGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLT 410
G+T +AV I I I+V VPEGL VT+
Sbjct: 288 -GYT---------------WLEAV-----IFLIG---------IIVANVPEGLLATVTVC 317
Query: 411 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKI---NP 467
L + ++M LV+ L A ET+GS +TICSDKTGTLT N MTV + +
Sbjct: 318 LTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTT 377
Query: 468 PDDSSQMH----------SIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSW 517
D S S + L + + + NV + K V+G +E A+L
Sbjct: 378 EDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKR----AVAGDASESALLKC 433
Query: 518 A-VKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVH---WKGAAEMILASC 573
+ LG + +R + PFNS K + + H KGA E IL C
Sbjct: 434 IELCLGSVME-MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERC 492
Query: 574 TKYLDTDGQLQSIDGD-EDFFKAAVDEMAARSLRCVAI------------AYRFILDKWT 620
+ L G+ Q +D + ++ F+ A E+ R + ++F D
Sbjct: 493 SSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVN 551
Query: 621 LPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSD 680
P + L + ++ + DP R V DAV CR AG+KV MVTGD+ TAKAIA GI+
Sbjct: 552 FPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEG 611
Query: 681 AE-----ANDPNI--------------IEGKVFRALSDKEREKVAQEIT--VMGRSSPND 719
E A NI + G + ++ ++ +++ + T V R+SP
Sbjct: 612 NETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQ 671
Query: 720 KLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFAS 779
KL++V+ ++ G +VAVTGDG ND+PAL +ADIG+AMGI G++V+K+ +D+I+LDDNFAS
Sbjct: 672 KLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731
Query: 780 VVKVVRWGRSVFANIQKFIQFQLTVNVAAL---LINVVAAISSGDVPLNAVQLLWVNLIM 836
+V V GR +F N++K I + LT N+ + LI ++A I +PL + +L ++L
Sbjct: 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIP---LPLGTITILCIDLGT 788
Query: 837 DTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQV 882
D + A++LA E +M R P K + N LI A Q+
Sbjct: 789 DMVPAISLAYEKAESDIMKRQPRNPKTDKLVN---ERLISMAYGQI 831
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 300 bits (769), Expect = 3e-86
Identities = 243/891 (27%), Positives = 378/891 (42%), Gaps = 159/891 (17%)
Query: 98 SELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAI 157
+E + T++ +G++ D+ +R G N G L + ++LI+AA
Sbjct: 16 AEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAA 73
Query: 158 ASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMR 217
S A+ W +G I+ + L I++ I +Y+ +L K + +R
Sbjct: 74 ISFAM--------HDWIEGGVISAIIALNILIGFIQEYKAEKTMDSL-KNLASPMAHVIR 124
Query: 218 GGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPF 277
GK+ I D+V G+I L+ GD +PAD L+ + DE+ +TGES V KD F
Sbjct: 125 NGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATF 184
Query: 278 LM--------------SGCKVADGVGTMMVTGVGINTEWGLLMASISEDNG------EET 317
S V G + +N+E G + A + D G ++
Sbjct: 185 GKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDD 244
Query: 318 PLQVRLNG----------VATFIGI-VG--LAVAFLVLAVLLVRFFTGHTTKEDGSSAFV 364
P + R F+G+ VG L LAV+L + F
Sbjct: 245 PNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF- 303
Query: 365 KGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKAL 424
V K V I AI + +PE L +++T+A M +
Sbjct: 304 -----------DVDKEVAIYAICLAISI------IPESLIAVLSITMAMGAANMSKRNVI 346
Query: 425 VRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGR----------KKINP------- 467
VR+L A E +G+ ICSDKTGT+T +M + +I R NP
Sbjct: 347 VRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSG 406
Query: 468 -----PDDSSQMHSIVIYLLSE--------GIAQNTTGNVFVP--------------KDG 500
P + S + +L E + ++ ++F+ KD
Sbjct: 407 IPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDD 466
Query: 501 EAVE--VSGSPTEKAILSWAVKLGMKFDRVRSETTVL----------------------- 535
G PTE AI +A K + + + E +L
Sbjct: 467 ATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFE 526
Query: 536 HV--FPFNSEKKRGGVAVKRINSEVH-VHWKGAAEMILASCTKYLDTDGQLQSI--DGDE 590
+ FPF+SE KR + + E + ++ KGA E I+ C+ DG S D D
Sbjct: 527 FIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDR 586
Query: 591 DFFKAAVDEMAARSLRCVAIAYRFI---------LDKWTLP----EEELILLAIVGIKDP 637
+ A ++ +AA LR +A A + L TL E +L L ++GI DP
Sbjct: 587 ELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDP 646
Query: 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILG----SDAEAN-DPNIIEGK 692
R AV+ C AG+ V M+TGD +TAKAIA E GI+ D + D ++ G
Sbjct: 647 PRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGS 706
Query: 693 VFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI 752
F ALSD+E + + V+ R +P K+ +++AL + A+TGDG ND+P+L A++
Sbjct: 707 QFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANV 766
Query: 753 GLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLIN 812
G+AMGI G++VAK+ SDI++ DDNFAS++ + GR +F NI KF+ L NVA ++
Sbjct: 767 GIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILL 826
Query: 813 VVAAISSGDV-----PLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLP 858
++ + PL+ V++LW +I A+ L E LM RLP
Sbjct: 827 IIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLP 877
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 248 bits (634), Expect = 6e-70
Identities = 181/699 (25%), Positives = 296/699 (42%), Gaps = 108/699 (15%)
Query: 117 SNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDG 176
R +G N P KK L FL W L+ ++ AAI ++AL E W D
Sbjct: 8 KKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEA-AAIIAIAL--------ENWVDF 58
Query: 177 ASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVP 236
I + L + I + + + L K+ + +R GK +I ++V G++V
Sbjct: 59 VIILGLLLLNATIGFIEENKAGNAVEAL-KQSLAPKARVLRDGKWQEIPASELVPGDVVR 117
Query: 237 LRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGV 296
L+IGD VPAD L G + +D++++TGES V K SG V G +VT
Sbjct: 118 LKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTK-KTGDIAYSGSTVKQGEAEAVVTAT 176
Query: 297 GINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTK 356
G+NT +G A + LQ L+ + F+ IV + V LVL L+V FF
Sbjct: 177 GMNTFFGKAAALVQSTETGSGHLQKILSKIGLFL-IVLIGV--LVLIELVVLFFGRGE-- 231
Query: 357 EDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMR 416
+ + ++V +P +P +++T+A
Sbjct: 232 ----------------------SFREGLQFA----LVLLVGGIPIAMPAVLSVTMAVGAA 265
Query: 417 KMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHS 476
++ KA+V RL+A E + +CSDKTGTLTLN++++ E + D
Sbjct: 266 ELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDD------- 318
Query: 477 IVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLH 536
LL +A + A+L A L D VL
Sbjct: 319 ---VLLYAALASREEDQ--------------DAIDTAVLGSAKDLKEARDG----YKVLE 357
Query: 537 VFPFNSEKKRGGVAVK-RINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKA 595
PF+ KR V+ + KGA ++IL C + + +++
Sbjct: 358 FVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEK--------- 408
Query: 596 AVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVK 655
VDE+A+R R + +A +W L ++ + DP R K+ ++ R GV+
Sbjct: 409 -VDELASRGYRALGVARTDEEGRWH-------FLGLLPLFDPPRHDTKETIERARHLGVE 460
Query: 656 VRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715
V+MVTGD+L AK A G+ NI V L R+ + + M
Sbjct: 461 VKMVTGDHLAIAKETARRLGL--------GTNIYTADVL--LKGDNRDDLPSGLGEMVED 510
Query: 716 S-------PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQG-TEVAKEN 767
+ P K +V+ L+K G +V +TGDG NDAPAL +AD+G+A + G T+ A+
Sbjct: 511 ADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIA--VAGATDAARSA 568
Query: 768 SDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNV 806
+DI++ + + +V + R +F ++ ++ +++ +
Sbjct: 569 ADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETI 607
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 218 bits (556), Expect = 6e-59
Identities = 183/747 (24%), Positives = 312/747 (41%), Gaps = 101/747 (13%)
Query: 115 DLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWY 174
+++ R FG N +K L L A+ + + IL + S T+ +E
Sbjct: 38 EVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYL----TDDLEAT-- 91
Query: 175 DGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNI-----QLEAMRGGKAVKISIFDV 229
IA V ++ I + R L +N + G ++ I +
Sbjct: 92 --VIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDAL 149
Query: 230 VVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRK-------DHKTPF----- 277
V G+++ L GD +PAD +++ L I++S++TGES V K
Sbjct: 150 VPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENL 209
Query: 278 LMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAV 337
G V G +V G +T +G L + +E G+ T + V+ L +
Sbjct: 210 CFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQ-TAFDKGVKSVSK------LLI 262
Query: 338 AFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVV 397
F+++ V +V G K D AF+ + + V
Sbjct: 263 RFMLVMVPVVLMINGLM-KGDWLEAFL-------------------------FALAVAVG 296
Query: 398 AVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVE 457
PE LP+ V+ LA M K +V+ LSA + G+ +C+DKTGTLT +++ +
Sbjct: 297 LTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIEL-- 354
Query: 458 AFIGRKKINPPDDSSQMHSIVI---YLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAI 514
D S + V+ +L S Q NV ++ S + +
Sbjct: 355 -------EKHIDSSGETSERVLKMAWLNSY--FQTGWKNVLDHAVLAKLDESAARQTAS- 404
Query: 515 LSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCT 574
W K D + PF+ +++R V V+ + KGA E +L CT
Sbjct: 405 -RW-----KKVDEI----------PFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCT 448
Query: 575 KYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFI----LDKWTLPEEELILLA 630
+ + ++ + EM + +R +A+A + + D EE+LI+
Sbjct: 449 HKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEG 508
Query: 631 IVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE 690
+G DP + K+A+ G+ V+++TGDN I E GI +AND +
Sbjct: 509 FLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGI-----DAND--FLL 561
Query: 691 GKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEA 750
G LSD+E + ++ + R +P K ++ L+K G V GDG NDAPAL +A
Sbjct: 562 GADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKA 621
Query: 751 DIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALL 810
D+G+++ ++AKE SDII+L+ + + + V GR+ F NI K+++ + N +
Sbjct: 622 DVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVF 680
Query: 811 INVVAAISSGDVPLNAVQLLWVNLIMD 837
+VA+ +P+ ++ LL NL+ D
Sbjct: 681 SVLVASAFIPFLPMLSLHLLIQNLLYD 707
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 175 bits (447), Expect = 5e-50
Identities = 79/255 (30%), Positives = 118/255 (46%), Gaps = 34/255 (13%)
Query: 179 IAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLR 238
I V + ++ A +YR + L K +R GK +I ++VVG+IV L+
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 239 IGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGI 298
GD+VPADG ++ G SL +DES++TGES V K + + +G V G ++VT G
Sbjct: 62 PGDRVPADGRIIEG-SLEVDESALTGESLPVEK-SRGDTVFAGTVVLSGELKVIVTATGE 119
Query: 299 NTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKED 358
+TE G + + E +TPLQ L+ +A + + LA+A LV F D
Sbjct: 120 DTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILV-------FLIWFFRGGD 172
Query: 359 GSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKM 418
A ++ + ++V A PE LPLAV L LA ++
Sbjct: 173 FLEALLRA-------------------------LAVLVAACPEALPLAVPLALAVGAGRL 207
Query: 419 MADKALVRRLSACET 433
LV+ LSA ET
Sbjct: 208 AKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 183 bits (468), Expect = 3e-49
Identities = 161/669 (24%), Positives = 281/669 (42%), Gaps = 148/669 (22%)
Query: 150 IILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKR 209
+++ +A IA+ A+G+ EG A +FL ++ + + + L+
Sbjct: 3 LLMALATIAAYAMGLVLEG-----------ALLLFLFLLGETLEERAKGRASDALSALLA 51
Query: 210 NIQLEAMR---GGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGES 266
A G ++ + ++ VG+IV +R G+++P DGV+++G S +DES++TGES
Sbjct: 52 LAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESE-VDESALTGES 110
Query: 267 KIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGV 326
V K + +G DG T+ VT +G ++ ++ + E + P+Q + +
Sbjct: 111 MPVEKKEGDE-VFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADRI 169
Query: 327 ATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATN 386
A++ LA+A L V L G A +
Sbjct: 170 ASYYVPAVLAIALLTFVVWLALGALG---------ALYRA-------------------- 200
Query: 387 SRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTG 446
+ ++VVA P L LA + + ++ L++ A E + T+ DKTG
Sbjct: 201 -----LAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTG 255
Query: 447 TLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVS 506
TLT + TVV+ I P DD+S ++ L + A+E S
Sbjct: 256 TLTTGKPTVVD-------IEPLDDASISEEELLALAA------------------ALEQS 290
Query: 507 GS-PTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGA 565
S P +AI+ +A K G++ + V V G
Sbjct: 291 SSHPLARAIVRYAKKRGLELPKQEDVEEV-------------------PGKGVEATVDGG 331
Query: 566 AEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEE 625
E+ + + ++L+ + ++E ++ V +A + E
Sbjct: 332 EEVRIGNP-RFLELAIE------PISASPDLLNEGESQGKTVVFVAV----------DGE 374
Query: 626 LILLAIVGIKDPCRPGVKDAV-KLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEAN 684
L+ ++ ++D RP K+A+ L R G+K+ M+TGDN A+A+A E GI AE
Sbjct: 375 LL--GVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAEL- 431
Query: 685 DPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDA 744
P DKL +V+ L++ G VVA+ GDG NDA
Sbjct: 432 -------------------------------LPEDKLAIVKELQEEGGVVAMVGDGINDA 460
Query: 745 PALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTV 804
PAL AD+G+AMG G++VA E +DI++L+D+ +S+ + R I++ + + L
Sbjct: 461 PALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGY 519
Query: 805 NVAALLINV 813
N+ A+ +
Sbjct: 520 NLVAIPLAA 528
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 5e-45
Identities = 60/180 (33%), Positives = 88/180 (48%), Gaps = 8/180 (4%)
Query: 822 VPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQ 881
+PL +Q+LW+NL+ D L ALAL EPP LM R P KEPL + + R +++Q L
Sbjct: 2 LPLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLLI 61
Query: 882 VTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGV 941
V L++ F G + TM FN VLSQ+FN NAR G+
Sbjct: 62 AIVTLLVFFLGLLGFGISESGLAQ------TMAFNTLVLSQLFNALNARSLRRSLFKIGL 115
Query: 942 TKNYLFMGIIGITCVLQIIIIE--FLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMI 999
N L + + ++ +LQ++II L T L + WL +G+ L + L K++
Sbjct: 116 FSNKLLLLAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVELRKLL 175
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 139 bits (353), Expect = 1e-33
Identities = 203/994 (20%), Positives = 360/994 (36%), Gaps = 221/994 (22%)
Query: 110 SGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGV 169
D++ R+ +G N + SFL L E + L + + +
Sbjct: 139 GLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKE--EVLHPFYVF------QVFSVILWLL 189
Query: 170 EEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNK-EKRNIQLEAMRGGKAVKISIFD 228
+E +Y VF+ ++S Y+ Q Q L + + +R GK V I+ +
Sbjct: 190 DEYYY---YSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQSVIVIRNGKWVTIASDE 246
Query: 229 VVVGEIV--PLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRK--------------- 271
+V G+IV P +P D VL++G S ++ES +TGES V K
Sbjct: 247 LVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVLKFPIPDNGDDDEDLFL 305
Query: 272 --DHKTPFLMSGCKV-------ADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVR 322
K L G K+ D +V G +T G L+ SI +
Sbjct: 306 YETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPK--PRVFKFY 363
Query: 323 LNGVATFIGIVGLAV-AFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIV 381
+ + + LA+ F+ + L++ DG
Sbjct: 364 KDSFKFILFLAVLALIGFIYTIIELIK--------------------------DGRPLGK 397
Query: 382 TIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSAC------ETMG 435
I R++ + +VV P LP +++ + S+ L ++ C G
Sbjct: 398 IIL---RSLDIITIVV--PPALPAELSIGINNSL------ARLKKKGIFCTSPFRINFAG 446
Query: 436 SATTICSDKTGTLTLNEMTV-----VEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNT 490
C DKTGTLT + + + + KI D SS SI L+
Sbjct: 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTED-SSLKPSITHKALA------- 498
Query: 491 TGNVFVPKDGEAVEVSGSPTEKAILS---WAVKLG-------MKFDRVRSETT-----VL 535
T + +G+ V G P +K + W ++ VR++ ++
Sbjct: 499 TCHSLTKLEGKLV---GDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSII 555
Query: 536 HVFPFNSEKKRGGVAVKRINSEVHVHW-KGAAEMILASCTKYLDTDGQLQSIDGDEDFFK 594
F F+S +R V V + + KGA E I + C+ +++ D ++
Sbjct: 556 RRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP--------ETVPSD---YQ 604
Query: 595 AAVDEMAARSLRCVAIAYRFILDKWTLP----------EEELILLAIVGIKDPCRPGVKD 644
+ R +A+AY+ L K TL E L L + ++P +P K+
Sbjct: 605 EVLKSYTREGYRVLALAYK-ELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKE 663
Query: 645 AVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGS----------DAEANDPNIIE---- 690
+K + A ++ M+TGDN TA +A ECGI+ E+ PN I+
Sbjct: 664 VIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVI 723
Query: 691 ----------------------------------GKVFRALSDKEREKVAQEI---TVMG 713
GK F L E + + + TV
Sbjct: 724 DSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFA 783
Query: 714 RSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIIL 773
R +P+ K LV+ L+K V + GDG ND AL +AD+G+++ VA +
Sbjct: 784 RMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAEASVA---APFTSK 840
Query: 774 DDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVN 833
+ + V V+R GR A + F F+ + + V+ + L Q L ++
Sbjct: 841 LASISCVPNVIREGRC--ALVTSFQMFKYMALYSLIQFYSVSILYLIGSNLGDGQFLTID 898
Query: 834 LIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGT 893
L++ AL ++ P L ++ P +N+ ++ L Q + ++
Sbjct: 899 LLLIFPVALLMSRNKPLKKL------SKERPP-SNLFSVYILTSVLIQFVLHILSQVYLV 951
Query: 894 SILH----------LEGERRQHASDVKNTMIFNAFVLSQI--FNEFNARKPDEINVFTGV 941
LH ++ E+ + + NT++F + + P ++
Sbjct: 952 FELHAQPWYKPENPVDLEKENFPN-LLNTVLFFVSSFQYLITAIVNSKGPPFREPIY--- 1007
Query: 942 TKNYLFM-GIIGITCVLQIIIIEFLGKFTKTVKL 974
KN F+ +I +L +++++ K +++
Sbjct: 1008 -KNKPFVYLLITGLGLLLVLLLDPHPLLGKILQI 1040
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 3e-31
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 16/305 (5%)
Query: 539 PFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGD-EDFFKAAV 597
PF+ E++R V V + KGA E IL C+ + +G++ +D K
Sbjct: 448 PFDFERRRMSVVVAENTEHHQLICKGALEEILNVCS-QVRHNGEIVPLDDIMLRRIKRVT 506
Query: 598 DEMAARSLRCVAIAYRFIL----DKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAG 653
D + + LR VA+A +++ D E +LIL + DP + A+K + +G
Sbjct: 507 DTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASG 566
Query: 654 VKVRMVTGDN-LQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712
V V+++TGD+ L AK C +G DA ++ G LSD E +A+ T+
Sbjct: 567 VTVKILTGDSELVAAKV----CHEVGLDAG----EVLIGSDIETLSDDELANLAERTTLF 618
Query: 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIII 772
R +P K +V L++ G VV GDG NDAPAL ADIG+++ ++A+E +DII+
Sbjct: 619 ARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIIL 677
Query: 773 LDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWV 832
L+ + + + V GR FAN+ K+I+ + N + +VA+ +P+ + LL
Sbjct: 678 LEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQ 737
Query: 833 NLIMD 837
NL+ D
Sbjct: 738 NLLYD 742
|
Length = 902 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 1e-30
Identities = 69/214 (32%), Positives = 108/214 (50%), Gaps = 44/214 (20%)
Query: 628 LLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPN 687
L+ ++ + D RP K+A+ + G+KV M+TGDN +TA+AIA E GI AE
Sbjct: 528 LVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAEL---- 583
Query: 688 IIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747
P DK +V+ L+ G VA+ GDG NDAPAL
Sbjct: 584 ----------------------------LPEDKAEIVRELQAEGRKVAMVGDGINDAPAL 615
Query: 748 HEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVA 807
AD+G+AMG GT+VA E +D++++ D+ ++V + + R+ I++ + + N
Sbjct: 616 AAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAI 674
Query: 808 ALLINV-------VAAI----SSGDVPLNAVQLL 830
A+ + +AA+ SS V LNA++LL
Sbjct: 675 AIPLAAGGLLTPWIAALAMSGSSVLVVLNALRLL 708
|
Length = 713 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 1e-27
Identities = 154/668 (23%), Positives = 266/668 (39%), Gaps = 154/668 (23%)
Query: 181 FAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMR-GGKAVKISIFDVVVGEIVPLRI 239
V A+++ R Q +L K+ + +R G K+ + G+IV +
Sbjct: 75 ITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEA 134
Query: 240 GDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGIN 299
GD +P DG ++ G + ++DES++TGES V K+ SG A G G I
Sbjct: 135 GDVIPCDGEVIEGVA-SVDESAITGESAPVIKE-------SGGDFASVTG-----GTRIL 181
Query: 300 TEWGLLMASISEDNGE----------------ETPLQVRLNGVATFIGIVGLAVAFLVLA 343
++W L+ + + GE +TP N +A I ++ L + FL++
Sbjct: 182 SDW--LVVECTANPGETFLDRMIALVEGAQRRKTP-----NEIALTILLIALTLVFLLVT 234
Query: 344 VLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGL 403
L F + + + G++ + IA R + ++
Sbjct: 235 ATLWPFAAYGGNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVI-------- 286
Query: 404 PLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAF-IGR 462
A S R A E G T+ DKTGT+TL E
Sbjct: 287 --------ATSGR-------------AVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG 325
Query: 463 KKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLG 522
D++Q+ S+ D +P K+I+ A +LG
Sbjct: 326 VDEKTLADAAQLASL--------------------ADD-------TPEGKSIVILAKQLG 358
Query: 523 MKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQ 582
++ D V+S F ++ + G+ + + KGA + I ++++ +G
Sbjct: 359 IREDDVQSLH--ATFVEFTAQTRMSGINLDN-GRMIR---KGAVDAI----KRHVEANGG 408
Query: 583 LQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGV 642
D D+ AVD++A + + + E+ + ++ +KD + G+
Sbjct: 409 HIPTDLDQ-----AVDQVARQGGTPLVVC------------EDNRIYGVIYLKDIVKGGI 451
Query: 643 KDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKER 702
K+ R G+K M+TGDN TA AIA E G+ AEA
Sbjct: 452 KERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEA------------------- 492
Query: 703 EKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTE 762
+P DK+ L++ + G +VA+TGDGTNDAPAL +AD+G+AM GT+
Sbjct: 493 -------------TPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQ 538
Query: 763 VAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDV 822
AKE ++++ LD + +++VV G+ + F + +VA + A ++
Sbjct: 539 AAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAAYP 598
Query: 823 PLNAVQLL 830
L A+ ++
Sbjct: 599 QLQALNIM 606
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 5e-27
Identities = 93/329 (28%), Positives = 154/329 (46%), Gaps = 22/329 (6%)
Query: 523 MKFDRVRSETTVLHVF------PFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKY 576
+ F E + PF+ ++R V V+ + + KGA E +LA T
Sbjct: 424 VAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHV 483
Query: 577 LDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDK------WTLPEEELILLA 630
D D + + A + A R + +A R I T E +L++
Sbjct: 484 RDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRG 543
Query: 631 IVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDN-LQTAKAIALECGILGSDAEANDPNII 689
+ DP + A+ R+ GV V+++TGDN + TAK I E G+ E +P +
Sbjct: 544 FLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAK-ICREVGL-----EPGEP--L 595
Query: 690 EGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHE 749
G A+ D + +E TV + +P K +++AL+ G V GDG NDAPAL +
Sbjct: 596 LGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655
Query: 750 ADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAAL 809
AD+G+++ G ++AKE++DII+L+ + + + V GR F NI K++ + N +
Sbjct: 656 ADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNV 714
Query: 810 LINVVAAISSGDVPLNAVQLLWVNLIMDT 838
+VA+ +P+ A+ LL NL+ D
Sbjct: 715 FSVLVASAFIPFLPMLAIHLLLQNLMYDI 743
|
Length = 903 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 9e-26
Identities = 163/670 (24%), Positives = 265/670 (39%), Gaps = 176/670 (26%)
Query: 147 LTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVV------TAISDYRQSLQ 200
LT + I + G + +A + L V A+++ R Q
Sbjct: 44 LTTFLTIFPDLFG------GTGGSRLFN----LAITIILWFTVLFANFAEAVAEGRGKAQ 93
Query: 201 FQNLNKEKRNIQLEAMR-GGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDE 259
+L K K +R G + ++ G+IV + G+ +P+DG ++ G ++DE
Sbjct: 94 ADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDE 152
Query: 260 SSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGE---- 315
S++TGES V ++ SG + G G + ++W L I+ + GE
Sbjct: 153 SAITGESAPVIRE-------SGGDFSSVTG-----GTRVLSDW--LKIRITANPGETFLD 198
Query: 316 ------------ETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAF 363
+TP N +A I + GL + FL+ L F + +
Sbjct: 199 RMIALVEGAERQKTP-----NEIALTILLSGLTLIFLLAVATLYPF-----------AIY 242
Query: 364 VKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKA 423
G S V + + I T TI GL A+ + M ++
Sbjct: 243 SGGGA-ASVTVLVALLVCLIPT-------TI------GGLLSAIGIA---GMDRVTQFNV 285
Query: 424 LVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPD--DSSQMHSIVIYL 481
+ A E G T+ DKTGT+TL E FI ++ + D++Q+ S+
Sbjct: 286 IATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE-FIPVPGVSEEELADAAQLASL---- 340
Query: 482 LSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLG--MKFDRVRSETTVLHVFP 539
A T P ++I+ A KLG ++ D ++S + P
Sbjct: 341 -----ADET------------------PEGRSIVELAKKLGIELREDDLQSHAEFV---P 374
Query: 540 FNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDED-FFKAAVD 598
F ++ + GV + KGA + I ++ G AAVD
Sbjct: 375 FTAQTRMSGVDL----PGGREIRKGAVDAIRR----------YVRERGGHIPEDLDAAVD 420
Query: 599 EMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRM 658
E++ + + E +L ++ +KD +PG+K+ R G+K M
Sbjct: 421 EVSRLGGTPLVVV------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVM 468
Query: 659 VTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPN 718
+TGDN TA AIA E G+ AEA +P
Sbjct: 469 ITGDNPLTAAAIAAEAGVDDFIAEA--------------------------------TPE 496
Query: 719 DKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFA 778
DKL L++ + G +VA+TGDGTNDAPAL +AD+G+AM GT+ AKE ++++ LD N
Sbjct: 497 DKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPT 555
Query: 779 SVVKVVRWGR 788
+++VV G+
Sbjct: 556 KLIEVVEIGK 565
|
Length = 681 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 2e-24
Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 33/184 (17%)
Query: 628 LLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPN 687
L ++ + D +P K+ ++ + G++ M+TGDN +TAKA+A E GI AE
Sbjct: 405 LAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIENVRAEV---- 460
Query: 688 IIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747
P+DK L++ L++ G VVA+ GDG NDAPAL
Sbjct: 461 ----------------------------LPDDKAALIKKLQEKGKVVAMVGDGINDAPAL 492
Query: 748 HEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVA 807
+AD+G+A+G GT+VA E +D+++L ++ V + R I++ + + NV
Sbjct: 493 AQADVGIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVI 551
Query: 808 ALLI 811
A+ I
Sbjct: 552 AIPI 555
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 3e-24
Identities = 136/628 (21%), Positives = 220/628 (35%), Gaps = 161/628 (25%)
Query: 332 IVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQ 391
I+ L VL ++ +++ S +A
Sbjct: 251 IIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTF------- 303
Query: 392 VTIVVVAVPEGLPLAVTLTLA--------YSMRKMMADK----ALVRRLSACETMGSATT 439
+ + +P + L V+L L S +M +K A VR + E +G
Sbjct: 304 LILFSSLIP--ISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEY 361
Query: 440 ICSDKTGTLTLNEMTVVEAFIGRKKI--NPPDDSSQMH----------------SIVIYL 481
I SDKTGTLT N M + I + + S
Sbjct: 362 IFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSMLVESKGFTF 421
Query: 482 LSEGIAQNTTGN----------------------VFVPKDGEAVEVSG-SPTEKAILSWA 518
+ + N F E + SP E A++ A
Sbjct: 422 VDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAA 481
Query: 519 VKLGMKF-----------DRVRSETT---VLHVFPFNSEKKRGGVAVKRINSEVHVHWKG 564
+G F + ET +L+V FNS++KR V V+ + + + KG
Sbjct: 482 RDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKG 541
Query: 565 AAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFI----LDKWT 620
A +I K L + G + + K ++ A+ LR + IAYR + ++W
Sbjct: 542 ADTVIF----KRLSSGG-----NQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWN 592
Query: 621 ----------------------LPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRM 658
E++LILL I+D + GV + ++L R AG+K+ +
Sbjct: 593 EEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWV 652
Query: 659 VTGDNLQTAKAIALECGIL-----------------------------GSDAEAND---- 685
+TGD ++TA I C +L G+ E N+
Sbjct: 653 LTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDS 712
Query: 686 PN---IIEGKVFRALSDKEREKVAQEIT------VMGRSSPNDKLLLVQALRKG-GDVVA 735
N +I+GK D+E EK ++ + R SP+ K +V+ ++K G
Sbjct: 713 GNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTL 772
Query: 736 VTGDGTNDAPALHEADIGLAMGIQGTE--VAKENSDIIILDDNFASVVKVVRW-GRSVFA 792
GDG ND + EAD+G+ GI G E A SD I F + K++ GR +
Sbjct: 773 AIGDGANDVSMIQEADVGV--GISGKEGMQAVMASDFAI--GQFRFLTKLLLVHGRWSYK 828
Query: 793 NIQKFIQFQLTVNVAALLINVVAAISSG 820
I K I + N+ +I + +G
Sbjct: 829 RISKMILYFFYKNLIFAIIQFWYSFYNG 856
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 3e-23
Identities = 155/663 (23%), Positives = 265/663 (39%), Gaps = 140/663 (21%)
Query: 181 FAVFLVIVVT--------AISDYRQSLQFQNLNKEKRNIQLEAMRG-GKAVKISIFDVVV 231
F++F+++++T A+++ R Q L + + ++ ++ G I D+
Sbjct: 66 FSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKK 125
Query: 232 GEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPF--LMSGCKVADGVG 289
G IV + G+Q+P DG ++ G + +DES++TGES V K+ F ++ G VA
Sbjct: 126 GHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWL 184
Query: 290 TMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRF 349
+ +T ++ ++ + ++TP N +A F ++ L + FL V+L +
Sbjct: 185 EVEITSEPGHSFLDKMIGLVEGATRKKTP-----NEIALFTLLMTLTIIFL--VVILTMY 237
Query: 350 FTGHTTKEDGSSAFVKGRTS--VSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAV 407
+ S A + + + G++ + IA R Q I
Sbjct: 238 PLAKFLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNI------------- 284
Query: 408 TLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINP 467
LA S R + ET G + DKTGT+T FI
Sbjct: 285 ---LAKSGRSV-------------ETCGDVNVLILDKTGTITYGNRMADA-FI------- 320
Query: 468 PDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDR 527
P SS +V IA +T P ++I+ A K + +
Sbjct: 321 PVKSSSFERLVKAAYESSIADDT------------------PEGRSIVKLAYKQHIDLPQ 362
Query: 528 VRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSID 587
E PF +E + GV K EV +KGA ++ + + G I
Sbjct: 363 EVGE-----YIPFTAETRMSGV--KFTTREV---YKGAPNSMV---KRVKEAGGH---IP 406
Query: 588 GDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVK 647
D D V + L + E+ +L ++ +KD + G+ + +
Sbjct: 407 VDLDALVKGVSKKGGTPLVVL---------------EDNEILGVIYLKDVIKDGLVERFR 451
Query: 648 LCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQ 707
R+ G++ M TGDN TA IA E G+ D + E K
Sbjct: 452 ELREMGIETVMCTGDNELTAATIAKEAGV--------DRFVAECK--------------- 488
Query: 708 EITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEN 767
P DK+ +++ + G +VA+TGDGTNDAPAL EA++GLAM GT AKE
Sbjct: 489 ---------PEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEA 538
Query: 768 SDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAV 827
+++I LD N +++VV G+ + F + ++A + A + +N +
Sbjct: 539 ANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMNHL 598
Query: 828 QLL 830
++
Sbjct: 599 NIM 601
|
Length = 673 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 5e-23
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 33/187 (17%)
Query: 628 LLAIVGIKDPCRPGVKDAVKLCRDAGV-KVRMVTGDNLQTAKAIALECGILGSDAEANDP 686
L + + D RP +A+ + G+ KV M+TGD A+ +A E GI AE
Sbjct: 353 YLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAEL--- 409
Query: 687 NIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPA 746
P DKL +V+ LR+ VA+ GDG NDAPA
Sbjct: 410 -----------------------------LPEDKLEIVKELREKYGPVAMVGDGINDAPA 440
Query: 747 LHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNV 806
L AD+G+AMG G++VA E +D+++L+D+ + + + +R R +++ + L + +
Sbjct: 441 LAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIIL 500
Query: 807 AALLINV 813
+L+ +
Sbjct: 501 LLILLAL 507
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 93.7 bits (234), Expect = 2e-19
Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 33/160 (20%)
Query: 628 LLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPN 687
+L ++ +KD +PG+K+ R G+K M+TGDN TA AIA E G+ AEA
Sbjct: 436 VLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAEA---- 491
Query: 688 IIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747
+P DKL L++ + G +VA+TGDGTNDAPAL
Sbjct: 492 ----------------------------TPEDKLALIRQEQAEGRLVAMTGDGTNDAPAL 523
Query: 748 HEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWG 787
+AD+G+AM GT+ AKE +++ LD N +++VV G
Sbjct: 524 AQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIG 562
|
Length = 679 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 92.8 bits (231), Expect = 5e-19
Identities = 68/240 (28%), Positives = 106/240 (44%), Gaps = 44/240 (18%)
Query: 222 VKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRK-------DHK 274
++I I +V G+I+ L GD +PAD ++ L + ++S+TGES V K +H
Sbjct: 176 LEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHS 235
Query: 275 TPF-----LMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATF 329
P G V G +V G NT +G L +SE + E Q ++ V+
Sbjct: 236 NPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSW- 294
Query: 330 IGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRA 389
L + F+++ +V G+ TK D A +
Sbjct: 295 -----LLIRFMLVMAPVVLLINGY-TKGDWWEAALFA----------------------- 325
Query: 390 IQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLT 449
+++ V PE LP+ VT TLA K+ K +V+RL A + G+ +C+DKTGTLT
Sbjct: 326 --LSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLT 383
|
Length = 902 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 85.7 bits (213), Expect = 6e-17
Identities = 77/338 (22%), Positives = 138/338 (40%), Gaps = 65/338 (19%)
Query: 139 FLWEAWQDL--------TLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVT 190
F AW+ L TL+ L A I + A + + +++ A A +FL ++
Sbjct: 134 FYRGAWRALRRGRLNMDTLVAL--ATIGAYAYSL-YATLFPVYFEEA--AMLIFLFLLGR 188
Query: 191 AISDY-----RQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPA 245
+ R++++ L G+ ++ + +V VG+IV +R G+++P
Sbjct: 189 YLEARAKGRARRAIR--ALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPV 246
Query: 246 DGVLVTGHSLAIDESSMTGESKIVRK---DHKTPFLMSGCKVADGVGTMMVTGVGINTEW 302
DGV+V+G S ++DES +TGES V K D + +G DG T+ VT VG +T
Sbjct: 247 DGVVVSGSS-SVDESMLTGESLPVEKKPGDE----VFAGTVNLDGSLTIRVTRVGADTTL 301
Query: 303 GLLMASISEDNGEETPLQV---RLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDG 359
++ + E + P+Q R+ + +V A+ F + + D
Sbjct: 302 ARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLF---------GGGDW 352
Query: 360 SSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMM 419
+A + + ++V+A P L LA + + +
Sbjct: 353 ETALYRA-------------------------LAVLVIACPCALGLATPTAILVGIGRAA 387
Query: 420 ADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVE 457
L++ A E + T+ DKTGTLT + V +
Sbjct: 388 RRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTD 425
|
Length = 713 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 1e-16
Identities = 71/219 (32%), Positives = 104/219 (47%), Gaps = 51/219 (23%)
Query: 630 AIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNII 689
A++ I+DP R A++ AG ++ M+TGDN TA AIA E GI +I
Sbjct: 643 ALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI---------DEVI 693
Query: 690 EGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHE 749
G V+ P+ K ++ L+ G VA+ GDG NDAPAL +
Sbjct: 694 AG-------------------VL----PDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQ 730
Query: 750 ADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQK-----FIQFQLTV 804
AD+G+AMG G++VA E + I ++ + V + R+ N+++ FI L +
Sbjct: 731 ADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGI 789
Query: 805 NVAA---------LLINVVA----AISSGDVPLNAVQLL 830
+AA LL VVA A+SS V NA +LL
Sbjct: 790 PIAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLL 828
|
Length = 834 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 82.4 bits (204), Expect = 4e-16
Identities = 69/318 (21%), Positives = 135/318 (42%), Gaps = 64/318 (20%)
Query: 150 IILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKR 209
+++ +AA+ ++A+G EG L++++ +I + +L+ + +R
Sbjct: 3 LLMALAALGAVAIGEYLEGA---------------LLLLLFSIGE---TLEEYASGRARR 44
Query: 210 NIQLEAM----------RGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDE 259
++ M RGG ++++ ++ VG++V ++ G++VP DGV+++G S +DE
Sbjct: 45 ALK-ALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTS-TVDE 102
Query: 260 SSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPL 319
S++TGES V K + +G DGV T++VT + ++ ++ + E +
Sbjct: 103 SALTGESVPVEKA-PGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKT 161
Query: 320 QVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIK 379
Q + F V + LA+ LV + V A
Sbjct: 162 QRFI---DRFARYYTPVVLAIALAIWLV------------PGLLKRWPFWVYRA------ 200
Query: 380 IVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATT 439
+ ++VVA P L ++ ++ L++ +A E + T
Sbjct: 201 ------------LVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKT 248
Query: 440 ICSDKTGTLTLNEMTVVE 457
+ DKTGTLT VV+
Sbjct: 249 VAFDKTGTLTTGRPKVVD 266
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 4e-16
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 489 NTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGG 548
N ++ E+ G PTE A+L +A KLG+ + +R+ + PFNSE+KR
Sbjct: 4 NDA-KFGENEEKNGGEIIGDPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMS 62
Query: 549 VAVK-RINSEVHVHWKGAAEMILASCTKY 576
K + + KGA E IL C+
Sbjct: 63 TVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 2e-14
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 40/244 (16%)
Query: 218 GGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPF 277
G+ ++ + + G+IV + G+++P DG ++ G S +DES +TGES V K P
Sbjct: 99 DGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDP- 156
Query: 278 LMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVAT--FIGIVGL 335
+++G G + T G +T ++ + + + P+Q + VA ++ +
Sbjct: 157 VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAI 216
Query: 336 AV-AFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTI 394
A+ F++ +L F A VT+
Sbjct: 217 ALITFVIWLILGADFVF----------ALEVA-------------------------VTV 241
Query: 395 VVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMT 454
+++A P L LA +A + + L++ A E + T+ DKTGTLT + T
Sbjct: 242 LIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPT 301
Query: 455 VVEA 458
V +
Sbjct: 302 VTDV 305
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 7e-14
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 53/222 (23%)
Query: 628 LLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPN 687
+L ++ ++D R + A+ + G+K M+TGDN + A AIA E GI
Sbjct: 559 VLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI----------- 607
Query: 688 IIEGKVFRA--LSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAP 745
FRA L P DK+ V L + + A+ GDG NDAP
Sbjct: 608 -----DFRAGLL-------------------PEDKVKAVTELNQHAPL-AMVGDGINDAP 642
Query: 746 ALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVN 805
A+ A IG+AMG GT+VA E +D + + + +++ R+ ANI++ N
Sbjct: 643 AMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQ--------N 693
Query: 806 VA-ALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALAT 846
+ AL + + +++ L + LW+ ++ D+ GA AL T
Sbjct: 694 ITIALGLKAIFLVTT----LLGITGLWLAVLADS-GATALVT 730
|
Length = 741 |
| >gnl|CDD|204949 pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoinhibitory domain | Back alignment and domain information |
|---|
Score = 64.7 bits (158), Expect = 3e-13
Identities = 27/45 (60%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 35 DPFDIAQAKHVPVASLKRWRQA-SLVLNASRRFRYTLDLKKEEEK 78
DPFDI AK+ +L+RWRQA LV NA RRFRYT DL K E
Sbjct: 4 DPFDIP-AKNSSEEALRRWRQAVGLVKNARRRFRYTADLAKRCEA 47
|
This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00689, pfam00122, pfam00702, pfam00690. There is a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important. This family is the N terminal autoinhibitory domain of an endosomal Ca2+-ATPase. Length = 47 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 60.6 bits (148), Expect = 1e-11
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 94 VKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILI 153
V+ + L T+LEKG++ + + R +G N P KK +S ++D +IIL+
Sbjct: 6 VEEVLARLGTDLEKGLT--EAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIILL 63
Query: 154 VAAIAS 159
+AAI S
Sbjct: 64 IAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 2e-11
Identities = 70/252 (27%), Positives = 100/252 (39%), Gaps = 63/252 (25%)
Query: 224 ISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRK------------ 271
I + ++V G+IV L GD +PAD L+ L I ++ +TGE+ V K
Sbjct: 167 IPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSA 226
Query: 272 -----------DHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQ 320
D M G V G T +V G T +G L SI +T
Sbjct: 227 DALADDEGSLLDLPNICFM-GTNVVSGTATAVVVATGSRTYFGSLAKSIV-GTRAQTAFD 284
Query: 321 VRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKI 380
+N V+ L + F+++ V +V G T K D A
Sbjct: 285 RGVNSVSW------LLIRFMLVMVPVVLLINGFT-KGDWLEAL----------------- 320
Query: 381 VTIATNSRAIQVTIVVVAV---PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSA 437
A + VAV PE LP+ V+ LA M K +V+RL+A + G+
Sbjct: 321 -LFA----------LAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAM 369
Query: 438 TTICSDKTGTLT 449
+C+DKTGTLT
Sbjct: 370 DVLCTDKTGTLT 381
|
Length = 903 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 2e-09
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 21/143 (14%)
Query: 609 AIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAK 668
+ + +L++L ++ + DP PG ++A+K ++AG+K+ ++TGDN TA
Sbjct: 66 LLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTAN 125
Query: 669 AIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALR 728
AIA G+ + A+ + +G+ P L ++ L
Sbjct: 126 AIARLLGLFDALVSADL---------------------YGLVGVGKPDPKIFELALEELG 164
Query: 729 KGGDVVAVTGDGTNDAPALHEAD 751
+ V + GDG ND PA A
Sbjct: 165 VKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 2e-06
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 97 LSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAA 156
+ E L+T+LEKG+S + + R +G N P K S L + + + IL+ AA
Sbjct: 12 VLERLQTDLEKGLS--SEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYILLAAA 69
Query: 157 IASLAL 162
+ S L
Sbjct: 70 VLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 3e-06
Identities = 86/346 (24%), Positives = 134/346 (38%), Gaps = 103/346 (29%)
Query: 508 SPTEKAILSWAVKLG-MKFDR--------VRSETTVLHVF---PFNSEKKRGGVAVKRIN 555
SP E+A++ A G M +R + E +V F+S++KR V + +
Sbjct: 567 SPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPD 626
Query: 556 SEVHVHWKGAAEMILASCTKYLD------TDGQLQ--SIDG------------DEDF--- 592
V V KGA + + + L+ T+ L S G D +F
Sbjct: 627 KTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQW 686
Query: 593 ---FKAAVDEMAARS--LRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVK 647
F+AA + R+ LR VA E L +L I+D + GV +A++
Sbjct: 687 HFSFEAASTALIGRAALLRKVASNV----------ENNLTILGASAIEDKLQQGVPEAIE 736
Query: 648 LCRDAGVKVRMVTGDNLQTAKAIALECGIL------------------------------ 677
R AG+KV ++TGD +TA +I +L
Sbjct: 737 SLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKK 796
Query: 678 ------------GSDAEANDPN--IIEGKVFRALSDKERE----KVAQEITVM--GRSSP 717
GS A A+DP II+G + D E E ++A + +V+ R +P
Sbjct: 797 LTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAP 856
Query: 718 NDKLLLVQALRK-GGDVVAVTGDGTNDAPALHEADIGLAMGIQGTE 762
K +V ++ D+ GDG ND + AD+G+ GI G E
Sbjct: 857 LQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQE 900
|
Length = 1178 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSD 699
PGVK+A+K ++ G+K+ + T + + + E G+ +I
Sbjct: 27 PGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDP-----VITSNGAAIYYP 81
Query: 700 KEREKVAQEITVMGRSSPNDKLLLVQALR-KGGDVVAVTGDGTNDAPAL-HEADIGLAM 756
KE + +G+ +P+ L ++ L +V+ V GD ND +G+A+
Sbjct: 82 KEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMV-GDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 3e-04
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 711 VMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV---AKEN 767
V + P K +++ L+K + V + G+G ND AL EAD+G+ IQ V
Sbjct: 73 VFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI-CTIQQEGVPERLLLT 131
Query: 768 SDIIILD 774
+D+++ +
Sbjct: 132 ADVVLKE 138
|
Length = 152 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 4e-04
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 217 RGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKT- 275
R G+ +++I D+ G+++ + G ++PADG L++ + DES++TGES V + T
Sbjct: 249 RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP-FASFDESALTGESIPV--ERATG 305
Query: 276 PFLMSGCKVADGVGTMMVT 294
+ +G D + T+ V
Sbjct: 306 EKVPAGATSVDRLVTLEVL 324
|
Length = 741 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.002
Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 30/171 (17%)
Query: 642 VKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE---------GK 692
VK+ ++ ++ + + + T D ++ + ++ I + K
Sbjct: 84 VKEIIEYLKENNLSILLYTDDGAYILNDVSEKIVREERYVKSFVLVIDDFELLEDEDINK 143
Query: 693 VFRALSDKEREKVAQEIT-------VMGRSSPN---------DK----LLLVQALRKGGD 732
+ ++ +++ +E+ + S P K L + L +
Sbjct: 144 ILIVTDPEDLDELEKELKELFGSLITITSSGPGYLEIMPKGVSKGTALKALAKHLGIDLE 203
Query: 733 VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKV 783
V GDG ND L A +G+AMG + K +D + +N V K
Sbjct: 204 EVIAFGDGENDIEMLELAGLGVAMG-NASPEVKAAADYVTGSNNEDGVAKA 253
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 732 DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRW 786
+V+A GD TND L A +G+AMG E KE +D + ++ V + +
Sbjct: 207 EVIAF-GDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259
|
Length = 264 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1023 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.91 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.91 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.9 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.5 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.5 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.04 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.04 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.02 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.02 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.01 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.0 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.99 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.97 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.91 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.9 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.89 | |
| PLN02887 | 580 | hydrolase family protein | 98.86 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 98.84 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.83 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.78 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.75 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.72 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.71 | |
| PF12515 | 47 | CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory d | 98.7 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.7 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.66 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.63 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.54 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.49 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.43 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.42 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.42 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.39 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.32 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.22 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.2 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.14 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.09 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.05 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.04 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.03 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.94 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.92 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.92 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.89 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.89 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.86 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.78 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.78 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.76 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.75 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.74 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.61 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.45 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.41 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.4 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.4 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.18 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.17 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.15 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.13 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.09 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.06 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.99 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.96 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.95 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.92 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.87 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.78 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.7 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.69 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.63 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.62 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.62 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.51 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.5 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.44 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.43 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.23 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.05 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.04 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.04 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.03 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.03 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.99 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.95 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.9 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.9 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.76 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.7 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.7 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.62 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.55 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.52 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.51 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.33 | |
| PLN02940 | 382 | riboflavin kinase | 95.29 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.18 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.73 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.52 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.44 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.42 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.35 | |
| PLN03017 | 366 | trehalose-phosphatase | 94.06 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.97 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.76 | |
| PLN02811 | 220 | hydrolase | 93.73 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 93.65 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.62 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 93.61 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.47 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 93.36 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 93.25 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 92.76 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 92.44 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 92.42 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.4 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 92.37 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.21 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 92.02 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 91.58 | |
| PLN02423 | 245 | phosphomannomutase | 91.56 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 91.49 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 90.93 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 90.53 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 90.47 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 90.41 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 89.94 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 89.85 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 89.82 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 89.72 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 88.63 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 88.04 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 87.72 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 86.84 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 86.07 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 85.76 | |
| PLN02151 | 354 | trehalose-phosphatase | 84.48 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 80.81 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 80.03 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-203 Score=1717.61 Aligned_cols=967 Identities=57% Similarity=0.896 Sum_probs=904.1
Q ss_pred CCCcccccCCCCChhhhhhHHHhhhhhhccccccccccchhhHHHHHHHHhhhhhhhc----------------------
Q 042091 34 SDPFDIAQAKHVPVASLKRWRQASLVLNASRRFRYTLDLKKEEEKEKRRRMIRAHAQV---------------------- 91 (1023)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~---------------------- 91 (1023)
+++|... ++|++.+++.|||.+...+++.||++|.+++.+.++..++++++|.+.+.
T Consensus 4 ~~~~~~~-~~n~~~~~~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~r~~~r~~~~~~~a~~~~~~~~~~~e~~~~i~~ 82 (1034)
T KOG0204|consen 4 DKDFVVS-MKNSSIEALQRWRLAYIVLEASRRFRFGASLKKLRELMEPRRKIRSAVLVSKAAALFIDAGSRTEYTLGIGA 82 (1034)
T ss_pred ccccccc-cccchhhhhhhhhhhhhhcccchhhccccCHHHHHHHHHHHhhhhhhhcccchhhhhhccccccccccccCH
Confidence 4455444 88999999999998889999999999999888777666666433333211
Q ss_pred ------------------CCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHH
Q 042091 92 ------------------IRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILI 153 (1023)
Q Consensus 92 ------------------~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll 153 (1023)
..++|+++.|+||+..||++++.|+.+||+.||+|.+|++++++||.|+|++++|.++++|+
T Consensus 83 e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~ 162 (1034)
T KOG0204|consen 83 EELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILM 162 (1034)
T ss_pred HHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHH
Confidence 13899999999999999999888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceecc
Q 042091 154 VAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGE 233 (1023)
Q Consensus 154 ~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GD 233 (1023)
+||++|+.+++++++.+++||||++|+++++++++++++.||++++||++|++++++.+++|+|||++++|++.||||||
T Consensus 163 vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGD 242 (1034)
T KOG0204|consen 163 VAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGD 242 (1034)
T ss_pred HHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred EEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCC-CCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccC
Q 042091 234 IVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDH-KTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISED 312 (1023)
Q Consensus 234 IV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~-~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 312 (1023)
|+.|+.||+|||||++++|++|.+|||+|||||++++|.. .+||+++||++.+|.++|+||++|++|+||++|..+.+.
T Consensus 243 Iv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~ 322 (1034)
T KOG0204|consen 243 IVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAG 322 (1034)
T ss_pred EEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcC
Confidence 9999999999999999999999999999999999999998 899999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhh
Q 042091 313 NGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQV 392 (1023)
Q Consensus 313 ~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 392 (1023)
.+++||||.+++++|..++.+++.+|.+++++++.+|+.+++...++. ........++.++++|.++ +
T Consensus 323 ~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-----~~~~~~~~~~~~v~~f~i~-------V 390 (1034)
T KOG0204|consen 323 GEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-----GTTWSDEYIQEFVKFFIIA-------V 390 (1034)
T ss_pred CCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-----CccccHHHHHHHHHHhhhe-------e
Confidence 989999999999999999999999999999999999999886655332 1233445677899999999 9
Q ss_pred hhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCC-
Q 042091 393 TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDS- 471 (1023)
Q Consensus 393 ~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~- 471 (1023)
+++|+|+|||||+||++++++++++|++++.|||+++||||||++++||+|||||||+|+|+|++.|++++.++.+...
T Consensus 391 TilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~ 470 (1034)
T KOG0204|consen 391 TILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKS 470 (1034)
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998877643322
Q ss_pred CcccHHHHHHHHHHHHccCCCcccccCCCC-ceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEE
Q 042091 472 SQMHSIVIYLLSEGIAQNTTGNVFVPKDGE-AVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVA 550 (1023)
Q Consensus 472 ~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~-~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msvi 550 (1023)
..+++.+.+++.++++.|++.+++.++.++ ..++.|+|+|+||+.|+.++|++++..|++.++++++||||.||+||++
T Consensus 471 ~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvv 550 (1034)
T KOG0204|consen 471 SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVV 550 (1034)
T ss_pred ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEE
Confidence 468899999999999999999999877664 7899999999999999999999999999999999999999999999999
Q ss_pred EeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccc---------cCC
Q 042091 551 VKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILD---------KWT 620 (1023)
Q Consensus 551 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~---------~~~ 620 (1023)
++.+++..++|||||+|.|+++|+.+++.+|+..+++++. +.+++.|+.||++|+||+|+|||++.. +++
T Consensus 551 i~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~ 630 (1034)
T KOG0204|consen 551 IKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEE 630 (1034)
T ss_pred EEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccc
Confidence 9988776239999999999999999999999999999988 899999999999999999999999421 235
Q ss_pred CCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHH
Q 042091 621 LPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDK 700 (1023)
Q Consensus 621 ~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~ 700 (1023)
.++.+++++|++|++||+|||++++|+.|++|||.|.|+||||..||++||.+|||.+++. +..+++|++|++++++
T Consensus 631 ~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~---d~~~lEG~eFr~~s~e 707 (1034)
T KOG0204|consen 631 LPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGG---DFLALEGKEFRELSQE 707 (1034)
T ss_pred cCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCC---ccceecchhhhhcCHH
Confidence 6789999999999999999999999999999999999999999999999999999998764 3689999999999999
Q ss_pred HHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHH
Q 042091 701 EREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASV 780 (1023)
Q Consensus 701 ~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i 780 (1023)
|++++.+++.|+||++|.||+.+|+.|+++|++||++|||+||+||||+||||+|||+.|||+|||+|||||+||||++|
T Consensus 708 e~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssI 787 (1034)
T KOG0204|consen 708 ERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSI 787 (1034)
T ss_pred HHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCC
Q 042091 781 VKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVG 860 (1023)
Q Consensus 781 ~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~ 860 (1023)
+++++|||++|.||+||+||||+.|+++++++|++++..+.+||+++|+||+|+|||+|++||||+|||++++|+|+|++
T Consensus 788 Vk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~G 867 (1034)
T KOG0204|consen 788 VKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVG 867 (1034)
T ss_pred HHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccceeec
Q 042091 861 RKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTG 940 (1023)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~ 940 (1023)
|++|+|++.||++++.|++||.++++++.|.|..+|+.+++. ......++|++||+||+||+||++|+|+.++.|+|++
T Consensus 868 R~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~-~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkg 946 (1034)
T KOG0204|consen 868 RTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPL-HSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKG 946 (1034)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCC-CCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHH
Confidence 999999999999999999999999999999999999866533 2356788999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCchhhhccccccc
Q 042091 941 VTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFVRPFQRC 1017 (1023)
Q Consensus 941 ~~~n~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~~~~~~~ 1017 (1023)
+++|++|++++.+++++|+++++|+|.+|++++|+|.+|++|+.++++.|++..++|++|.+..|...+.+.....+
T Consensus 947 i~~N~~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~~~~~~~~~~~~~ 1023 (1034)
T KOG0204|consen 947 IFRNRLFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLPKLKYAGLGGSKF 1023 (1034)
T ss_pred HhcCceEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheeccccccccceeeccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888776554443
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-156 Score=1334.93 Aligned_cols=876 Identities=32% Similarity=0.481 Sum_probs=762.1
Q ss_pred CCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcc
Q 042091 92 IRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEE 171 (1023)
Q Consensus 92 ~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~ 171 (1023)
..+++.+..+.+++++||+++ |+.+|++.||.|+++.....++|+.+++||.++...+|+++|++|+++.
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~--ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~-------- 76 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSD--EVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA-------- 76 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHH--HHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH--------
Confidence 458899999999999999998 9999999999999999999999999999999999999999999999997
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEe
Q 042091 172 GWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVT 251 (1023)
Q Consensus 172 ~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~ 251 (1023)
.|-|+++|.+++++++.+..+|||++++++++|++..+ +.++|+|+|+.+.+++.||||||||.|+.||+||||.+|++
T Consensus 77 ~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p-~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVP-PMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCC-ccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 46678888888999999999999999999999999886 79999999999999999999999999999999999999999
Q ss_pred eCCeEEeeccccCCCceeccCC-------------CCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCCh
Q 042091 252 GHSLAIDESSMTGESKIVRKDH-------------KTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETP 318 (1023)
Q Consensus 252 g~~l~VDES~LTGES~pv~K~~-------------~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~ 318 (1023)
..++.||||+|||||.|+.|.. +.|++|+||.|..|.++++|++||.+|++|++.+.+.+.+.++||
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9999999999999999999953 346899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhh
Q 042091 319 LQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVA 398 (1023)
Q Consensus 319 lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~ 398 (1023)
||++++.+...+..+...+++.++++- .++..++-.. +..+.....+|.++ +++.|++
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~n-----ig~f~~p~~~----------g~~fk~~~~~f~Ia-------VsLAVAA 293 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLN-----IGHFLDPVHG----------GSWFKGALYYFKIA-------VSLAVAA 293 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhh-----hhhhcccccc----------ccchhchhhhhhHH-------HHHHHHh
Confidence 999999999998854444344333331 1222222111 11223478899999 9999999
Q ss_pred ccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccC------------
Q 042091 399 VPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKIN------------ 466 (1023)
Q Consensus 399 iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~------------ 466 (1023)
||||||..++++++.|.+||+|++++||++.++|+||.+++||+|||||||+|+|++.++|+.+....
T Consensus 294 IPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty 373 (972)
T KOG0202|consen 294 IPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTY 373 (972)
T ss_pred ccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999998643221
Q ss_pred -CCC----------CCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhc--------
Q 042091 467 -PPD----------DSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDR-------- 527 (1023)
Q Consensus 467 -~~~----------~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~-------- 527 (1023)
+.. +.....+.+.+++..+..||. +.+...+. +.++..|.|+|.||..++++.|+.-..
T Consensus 374 ~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNd-a~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~ 451 (972)
T KOG0202|consen 374 SPEGEVFKDGLYEKDKAGDNDLLQELAEICALCND-ATVEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEE 451 (972)
T ss_pred CCCCceEecCccccccccccHHHHHHHHHHHhhhh-hhhhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhhcccccc
Confidence 111 011233455566655555554 33433322 455668999999999999998865422
Q ss_pred -------ccccccEEEEecCCCCCceEEEEEeecCC--eEEEEEeCchHHHHHhhccccccCC-ccccCCchH-HHHHHH
Q 042091 528 -------VRSETTVLHVFPFNSEKKRGGVAVKRINS--EVHVHWKGAAEMILASCTKYLDTDG-QLQSIDGDE-DFFKAA 596 (1023)
Q Consensus 528 -------~~~~~~il~~~~F~s~~k~msviv~~~~~--~~~~~~KGa~e~il~~c~~~~~~~~-~~~~l~~~~-~~~~~~ 596 (1023)
....++...++||+|+||+|+|.+..+.+ ++.+|+|||+|.|+++|+.++..+| ...|+++.. +.+.+.
T Consensus 452 ~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~ 531 (972)
T KOG0202|consen 452 ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILAN 531 (972)
T ss_pred cccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHH
Confidence 11124566999999999999999986644 4889999999999999988877766 448999988 999999
Q ss_pred HHHHHhccchhhhhhhccccc------------cCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCH
Q 042091 597 VDEMAARSLRCVAIAYRFILD------------KWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNL 664 (1023)
Q Consensus 597 ~~~~a~~glr~l~~ayk~~~~------------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~ 664 (1023)
..+|+++|+|||++|+++... ++...|.||+|+|++|+.||||++++++|+.|+++||||+|+|||+.
T Consensus 532 ~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~ 611 (972)
T KOG0202|consen 532 VYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNK 611 (972)
T ss_pred HHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCH
Confidence 999999999999999997642 23456889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCH
Q 042091 665 QTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDA 744 (1023)
Q Consensus 665 ~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~ 744 (1023)
.||++||+++|+.....+ -...+++|++++.++++++++...++.+|+|++|++|.+||+.||++|++|+|+|||+||+
T Consensus 612 ~TA~AI~r~iGi~~~~ed-~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDA 690 (972)
T KOG0202|consen 612 ETAEAIAREIGIFSEDED-VSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDA 690 (972)
T ss_pred HHHHHHHHHhCCCcCCcc-ccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccch
Confidence 999999999999876554 5668999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCch
Q 042091 745 PALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPL 824 (1023)
Q Consensus 745 ~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl 824 (1023)
||||.||||||||++||++||++||+||.||||++|+.+++|||.+|+||++|+.|+++.|+.++...++++.+..+.||
T Consensus 691 pALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL 770 (972)
T KOG0202|consen 691 PALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPL 770 (972)
T ss_pred hhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcccc--ccc--
Q 042091 825 NAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILH--LEG-- 900 (1023)
Q Consensus 825 ~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~-- 900 (1023)
+|+|+||+|++||.+||.+|+.|||+.|+|++|||++++++++..++.+++..|+|.+...+..+...++..+ +..
T Consensus 771 ~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~ 850 (972)
T KOG0202|consen 771 IPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQ 850 (972)
T ss_pred cchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhh
Confidence 9999999999999999999999999999999999999999999988888888888886544433322221100 000
Q ss_pred -------------cc-cccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHHHHHHH--HHH
Q 042091 901 -------------ER-RQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIII--IEF 964 (1023)
Q Consensus 901 -------------~~-~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--v~~ 964 (1023)
.+ .........|+.|..||+...||.+++|+.++..+..++|.|+||++++++++++|+++ +++
T Consensus 851 ~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~ 930 (972)
T KOG0202|consen 851 LAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPP 930 (972)
T ss_pred hcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEech
Confidence 00 00111234589999999999999999999988777889999999999999999998765 799
Q ss_pred HHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 042091 965 LGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPK 1003 (1023)
Q Consensus 965 ~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 1003 (1023)
++..|.+.||++.+|++.+.+.+..++++|++|++.|.+
T Consensus 931 l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~ 969 (972)
T KOG0202|consen 931 LQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNY 969 (972)
T ss_pred hhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999864
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-144 Score=1364.81 Aligned_cols=886 Identities=49% Similarity=0.779 Sum_probs=774.3
Q ss_pred CHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----cC
Q 042091 93 RVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIK-----TE 167 (1023)
Q Consensus 93 ~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~-----~~ 167 (1023)
.++++.+.|+++.++||+++.+|+++|+++||+|+++.++.+++|++++++|+++++++|++++++++++++. .+
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 5899999999999999994444999999999999999998899999999999999999999999999988743 23
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccE
Q 042091 168 GVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADG 247 (1023)
Q Consensus 168 ~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDg 247 (1023)
+..+.|++++.++++++++.+++++++|+++++++++++...+.+++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 44458999999888888889999999999999999998765557999999999999999999999999999999999999
Q ss_pred EEEeeCCeEEeeccccCCCceeccCCCC-CeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHH
Q 042091 248 VLVTGHSLAIDESSMTGESKIVRKDHKT-PFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGV 326 (1023)
Q Consensus 248 ill~g~~l~VDES~LTGES~pv~K~~~~-~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~ 326 (1023)
+|++|+.+.||||+|||||.|+.|.+++ +++|+||.|.+|.++++|++||.+|++|++++++.+++ +++|+|++++++
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~ 281 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSEL 281 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHH
Confidence 9999977899999999999999998754 68999999999999999999999999999999988755 578999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHH
Q 042091 327 ATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLA 406 (1023)
Q Consensus 327 ~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~la 406 (1023)
+.++..++++++++++++++..++......... . . ......+...|..+ +++++++||||||++
T Consensus 282 ~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~---~----~--~~~~~~~~~~~~~a-------l~llv~~iP~~Lp~~ 345 (941)
T TIGR01517 282 AGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR---D----T--EEDAQTFLDHFIIA-------VTIVVVAVPEGLPLA 345 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc---c----c--chhhHHHHHHHHHH-------HHHHHhhCCCchHHH
Confidence 999999888888887776654332221100000 0 0 00112356667777 999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHH
Q 042091 407 VTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGI 486 (1023)
Q Consensus 407 v~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i 486 (1023)
++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|++++..+..++..+......+...+++..++
T Consensus 346 vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 425 (941)
T TIGR01517 346 VTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGI 425 (941)
T ss_pred HHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998765433322211112334555666777
Q ss_pred HccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCch
Q 042091 487 AQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAA 566 (1023)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~ 566 (1023)
++|+...... ++.+..+..|||+|.|+++++.+.|.+....+..+++++.+||+|++|+|+++++.+++++++++||||
T Consensus 426 ~~~s~~~~~~-~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~ 504 (941)
T TIGR01517 426 SLNSSSEEVV-DRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGAS 504 (941)
T ss_pred HhCCCCcccc-CCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECCh
Confidence 7776543211 112334678999999999999988877766666788899999999999999999977778999999999
Q ss_pred HHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhcccccc----CCCCCCCcEEEeeeeccCCCcccH
Q 042091 567 EMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDK----WTLPEEELILLAIVGIKDPCRPGV 642 (1023)
Q Consensus 567 e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~----~~~~e~~l~~lG~i~~~D~lr~~~ 642 (1023)
|.|+++|+.+...+|...++++..+++++.+++++++|+|++++|||.++.+ ++..|++++|+|+++++||+|+++
T Consensus 505 e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~ 584 (941)
T TIGR01517 505 EIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGV 584 (941)
T ss_pred HHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhH
Confidence 9999999987766777777776337889999999999999999999987532 233478999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHH
Q 042091 643 KDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLL 722 (1023)
Q Consensus 643 ~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~ 722 (1023)
+++|+.|+++||+++|+|||++.||.++|++|||.++. ..+++|++++.+++++++++++++.||||++|+||.+
T Consensus 585 ~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~-----~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~ 659 (941)
T TIGR01517 585 REAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG-----GLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQL 659 (941)
T ss_pred HHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCC-----ceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHH
Confidence 99999999999999999999999999999999998643 3799999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHH
Q 042091 723 LVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQL 802 (1023)
Q Consensus 723 iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l 802 (1023)
+|+.+|++|++|+|+|||+||+||||+||||||||++|+|+|+++||+++++|+|+++++++++||++|+||+|+++|++
T Consensus 660 iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l 739 (941)
T TIGR01517 660 LVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQL 739 (941)
T ss_pred HHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHH
Q 042091 803 TVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQV 882 (1023)
Q Consensus 803 ~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~ 882 (1023)
++|+..+++.+++.++.++.|++++|++|+|+++|.+|+++|++|+|++++|++||++++++++++.||+++++++++++
T Consensus 740 ~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~ 819 (941)
T TIGR01517 740 TVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQL 819 (941)
T ss_pred HHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccccccccc--cccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHHHHHH
Q 042091 883 TVLLVLNFKGTSILHLEGER--RQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQII 960 (1023)
Q Consensus 883 ~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 960 (1023)
++.+++++.+..++...+.. ..+.....+|++|++|+++|+||.+++|+.+..++|+++++|++++.++++++++|++
T Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~ 899 (941)
T TIGR01517 820 VVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVI 899 (941)
T ss_pred HHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHH
Confidence 88877766554333222210 0112356789999999999999999999977557888999999999999999999999
Q ss_pred HHHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccC
Q 042091 961 IIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPV 1001 (1023)
Q Consensus 961 ~v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 1001 (1023)
++++++.+|++.|+++.+|+++++++++.+++.++.|++|+
T Consensus 900 ~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 900 IVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999974
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-141 Score=1329.97 Aligned_cols=866 Identities=27% Similarity=0.410 Sum_probs=733.6
Q ss_pred hcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Q 042091 90 QVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGV 169 (1023)
Q Consensus 90 ~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~ 169 (1023)
|...++++.+.|+++..+||+++ |+.+|+++||+|+++.++.+++|+.+++||.++++++|+++++++++.+
T Consensus 8 ~~~~~~~v~~~l~t~~~~GLs~~--ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~------ 79 (1053)
T TIGR01523 8 FSDIADEAAEFIGTSIPEGLTHD--EAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH------ 79 (1053)
T ss_pred hhCCHHHHHHHhCcCcccCCCHH--HHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh------
Confidence 45568899999999988999998 8999999999999999888999999999999999999999999999886
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEE
Q 042091 170 EEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVL 249 (1023)
Q Consensus 170 ~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgil 249 (1023)
.|++++.|+++++++++++.++++++++++++|+++.+ .+++|+|||++++|+++||||||||.|++||+|||||+|
T Consensus 80 --~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~-~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLAS-PMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred --hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCC-CceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 79999999999999999999999999999999998865 689999999999999999999999999999999999999
Q ss_pred EeeCCeEEeeccccCCCceeccCCC--------------CCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCC-
Q 042091 250 VTGHSLAIDESSMTGESKIVRKDHK--------------TPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNG- 314 (1023)
Q Consensus 250 l~g~~l~VDES~LTGES~pv~K~~~--------------~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~- 314 (1023)
+++++|.||||+|||||.||.|.+. .|++|+||.|.+|.++++|++||.+|++|+|.+++.+...
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 9999999999999999999999642 3689999999999999999999999999999998864321
Q ss_pred ----------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 042091 315 ----------------------------------EETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGS 360 (1023)
Q Consensus 315 ----------------------------------~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~ 360 (1023)
.+||||+++++++.+++.++++++++++++... .
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~--------- 304 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---D--------- 304 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---h---------
Confidence 249999999999999888887777666553211 0
Q ss_pred cccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceee
Q 042091 361 SAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTI 440 (1023)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I 440 (1023)
.....+..+ ++++++++|+|||+.++++++++++||++++++||+++++|+||++|+|
T Consensus 305 ---------------~~~~~~~~a-------v~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvI 362 (1053)
T TIGR01523 305 ---------------VDKEVAIYA-------ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDI 362 (1053)
T ss_pred ---------------hhHHHHHHH-------HHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEE
Confidence 012344456 8899999999999999999999999999999999999999999999999
Q ss_pred eeCCccccccCceEEEEEEeCCc-c---------cCCC-CC---------------------C--------C------c-
Q 042091 441 CSDKTGTLTLNEMTVVEAFIGRK-K---------INPP-DD---------------------S--------S------Q- 473 (1023)
Q Consensus 441 ~~DKTGTLT~n~m~v~~~~~~~~-~---------~~~~-~~---------------------~--------~------~- 473 (1023)
|+|||||||+|+|+|+++|..+. . |.+. .+ . . .
T Consensus 363 CsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1053)
T TIGR01523 363 CSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDI 442 (1053)
T ss_pred EecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999987541 1 1110 00 0 0 0
Q ss_pred ccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChh------cc-------------------
Q 042091 474 MHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFD------RV------------------- 528 (1023)
Q Consensus 474 ~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~------~~------------------- 528 (1023)
.++...+++..+..||+ +.+..+++++.+...|||+|.||+.++.+.|++.. ..
T Consensus 443 ~~~~~~~ll~~~~lcn~-a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (1053)
T TIGR01523 443 DMDLFIKLLETAALANI-ATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPG 521 (1053)
T ss_pred ccHHHHHHHHHHHhccC-CeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccccccccccccccc
Confidence 01123345544444443 33322111233456799999999999998886421 11
Q ss_pred cccccEEEEecCCCCCceEEEEEeecCC-eEEEEEeCchHHHHHhhccccccCC-ccccCCchH-HHHHHHHHHHHhccc
Q 042091 529 RSETTVLHVFPFNSEKKRGGVAVKRINS-EVHVHWKGAAEMILASCTKYLDTDG-QLQSIDGDE-DFFKAAVDEMAARSL 605 (1023)
Q Consensus 529 ~~~~~il~~~~F~s~~k~msviv~~~~~-~~~~~~KGa~e~il~~c~~~~~~~~-~~~~l~~~~-~~~~~~~~~~a~~gl 605 (1023)
+..+++++++||+|+||||+++++.+++ .+++|+|||||.|+++|+.+...+| ...+++++. +++.+.+++|+++|+
T Consensus 522 ~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~Gl 601 (1053)
T TIGR01523 522 SAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGL 601 (1053)
T ss_pred ccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCC
Confidence 2347899999999999999999986544 5889999999999999997655444 456788776 889999999999999
Q ss_pred hhhhhhhcccccc-------------CCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHH
Q 042091 606 RCVAIAYRFILDK-------------WTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIAL 672 (1023)
Q Consensus 606 r~l~~ayk~~~~~-------------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~ 672 (1023)
||+++|||.++++ .+..|+|++|+|+++++||+|++++++|+.|+++||+|+|+|||++.||.+||+
T Consensus 602 RvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~ 681 (1053)
T TIGR01523 602 RVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQ 681 (1053)
T ss_pred eEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence 9999999987532 123578999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCC-----CCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHh
Q 042091 673 ECGILGSDAE-----ANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747 (1023)
Q Consensus 673 ~~gi~~~~~~-----~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL 747 (1023)
++||.+.... .....+++|++++.++++++++...++.||||++|+||.++|+.+|++|++|+|+|||+||+|||
T Consensus 682 ~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaL 761 (1053)
T TIGR01523 682 EVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSL 761 (1053)
T ss_pred HcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHH
Confidence 9999754211 11358999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhc---C--CC
Q 042091 748 HEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISS---G--DV 822 (1023)
Q Consensus 748 ~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~---~--~~ 822 (1023)
++||||||||++|+++|+++||+++++|+|++|++++++||++|+||+|++.|.++.|+..+++.+++.++. | +.
T Consensus 762 k~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~ 841 (1053)
T TIGR01523 762 KMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVF 841 (1053)
T ss_pred HhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcC
Confidence 999999999989999999999999999999999999999999999999999999999999999999888874 2 47
Q ss_pred chhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcccc---cc
Q 042091 823 PLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILH---LE 899 (1023)
Q Consensus 823 pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~ 899 (1023)
||+++|+||+|+++|.+|+++|+.|||++++|+|||+.++++++++.+++.++..+++++++.+..+++..+.+. ..
T Consensus 842 Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~ 921 (1053)
T TIGR01523 842 PLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLG 921 (1053)
T ss_pred chHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999999999999887766554432111110 00
Q ss_pred cc-----ccc-cccccchhHHHHHHHHHHHHhhcccCCCCcccee---------------ecCcchHHHHHHHHHHHHHH
Q 042091 900 GE-----RRQ-HASDVKNTMIFNAFVLSQIFNEFNARKPDEINVF---------------TGVTKNYLFMGIIGITCVLQ 958 (1023)
Q Consensus 900 ~~-----~~~-~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~---------------~~~~~n~~~~~~~~~~~~~~ 958 (1023)
.. ... .....++|+.|.+++++|+++.+++|+.+...+. .+.++|++++++++++++++
T Consensus 922 ~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~ 1001 (1053)
T TIGR01523 922 HDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSA 1001 (1053)
T ss_pred ccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHH
Confidence 00 000 1234678999999999999999999987533221 23679999888888888887
Q ss_pred HHH--HHHHHH-cccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 042091 959 III--IEFLGK-FTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVP 1002 (1023)
Q Consensus 959 ~~~--v~~~~~-~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 1002 (1023)
+++ +|+++. +|++.|+++ +|+++++++++.++++|++|+++|+
T Consensus 1002 ~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~ 1047 (1053)
T TIGR01523 1002 FPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRR 1047 (1053)
T ss_pred HHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 554 688985 999999997 8999999999999999999998753
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-136 Score=1287.82 Aligned_cols=842 Identities=33% Similarity=0.510 Sum_probs=739.0
Q ss_pred hcCCHHHHHHHhCCCcCCCCC-CCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHH-HHHHHHHHHHHHHHHHHhccccC
Q 042091 90 QVIRVKGLSELLKTNLEKGIS-GDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAW-QDLTLIILIVAAIASLALGIKTE 167 (1023)
Q Consensus 90 ~~~~v~~l~~~l~~~~~~GLs-~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~-~~~~~~~ll~~ails~~~~~~~~ 167 (1023)
|...++++.+.|+++..+||+ ++ |+.+|+++||.|+++.++.+++|+.++++| +++++++|+++++++++.+
T Consensus 5 ~~~~~~~v~~~l~t~~~~GLs~~~--ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g---- 78 (884)
T TIGR01522 5 CELSVEETCSKLQTDLQNGLNSSQ--EASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG---- 78 (884)
T ss_pred hhCCHHHHHHHhCcCcccCCCcHH--HHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc----
Confidence 445688999999999989999 55 899999999999999888899999999999 9999999999999999887
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccE
Q 042091 168 GVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADG 247 (1023)
Q Consensus 168 ~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDg 247 (1023)
.|.+++.+++++++++.++.+++|++++.+++|.+..+ .+++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~-~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg 153 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVP-PECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADL 153 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCC-CeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeE
Confidence 68899888888888889999999999999999998765 6899999999999999999999999999999999999
Q ss_pred EEEeeCCeEEeeccccCCCceeccCCCC-------------CeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCC
Q 042091 248 VLVTGHSLAIDESSMTGESKIVRKDHKT-------------PFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNG 314 (1023)
Q Consensus 248 ill~g~~l~VDES~LTGES~pv~K~~~~-------------~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 314 (1023)
+|++|+++.||||+|||||.|+.|.+++ +++|+||.|.+|.++++|++||.+|++|++.+.+.++..
T Consensus 154 ~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 233 (884)
T TIGR01522 154 RIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEK 233 (884)
T ss_pred EEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCC
Confidence 9999987899999999999999998753 589999999999999999999999999999999998888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhh
Q 042091 315 EETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTI 394 (1023)
Q Consensus 315 ~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~i 394 (1023)
+++|+|+.+++++.++++++++++++++++. ++.+. ++...+..+ +++
T Consensus 234 ~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~---~~~~~----------------------~~~~~~~~~-------v~l 281 (884)
T TIGR01522 234 PKTPLQKSMDLLGKQLSLVSFGVIGVICLVG---WFQGK----------------------DWLEMFTIS-------VSL 281 (884)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcC----------------------CHHHHHHHH-------HHH
Confidence 8999999999999998877665554443332 21111 145667777 999
Q ss_pred hhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccC--------
Q 042091 395 VVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKIN-------- 466 (1023)
Q Consensus 395 lv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~-------- 466 (1023)
++++|||+||+++++++++++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+....
T Consensus 282 lv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~ 361 (884)
T TIGR01522 282 AVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLN 361 (884)
T ss_pred HHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccC
Confidence 999999999999999999999999999999999999999999999999999999999999999987543211
Q ss_pred CCCC--------CCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEe
Q 042091 467 PPDD--------SSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVF 538 (1023)
Q Consensus 467 ~~~~--------~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~ 538 (1023)
..+. ....++...+++..+..||+. .. ..+ ..+..|||+|.|+++++.+.|.+ ..+..++.++++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~-~~~---~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~ 434 (884)
T TIGR01522 362 QFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA-KF-RNE---ADTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEV 434 (884)
T ss_pred CCCcccccccccccccCHHHHHHHHHHhhhCCC-ee-cCC---CCCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEe
Confidence 0000 000122334455444444433 22 111 12346899999999999887753 334467889999
Q ss_pred cCCCCCceEEEEEeec-CCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhcccc
Q 042091 539 PFNSEKKRGGVAVKRI-NSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFIL 616 (1023)
Q Consensus 539 ~F~s~~k~msviv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~ 616 (1023)
||+|++|+|+++++.. ++++++++|||||.|+..|++++..+|...+++++. +++++.+++++++|+|++++|||.+
T Consensus 435 pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~- 513 (884)
T TIGR01522 435 PFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE- 513 (884)
T ss_pred CCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-
Confidence 9999999999998764 567889999999999999998887677777787765 7888999999999999999999865
Q ss_pred ccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhc
Q 042091 617 DKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRA 696 (1023)
Q Consensus 617 ~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~ 696 (1023)
+.+++|+|+++++||+|||++++|+.|+++|++++|+|||++.||.++|+++||.... ..+++|++++.
T Consensus 514 ------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~-----~~~v~g~~l~~ 582 (884)
T TIGR01522 514 ------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT-----SQSVSGEKLDA 582 (884)
T ss_pred ------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----CceeEhHHhHh
Confidence 4689999999999999999999999999999999999999999999999999998643 35789999999
Q ss_pred cCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCC
Q 042091 697 LSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDN 776 (1023)
Q Consensus 697 l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~ 776 (1023)
++++++++.+.++.||||++|+||.++|+.+|++|++|+|+|||+||+|||++||||||||.+|+++++++||+++++|+
T Consensus 583 ~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~ 662 (884)
T TIGR01522 583 MDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDD 662 (884)
T ss_pred CCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999997799999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCcccccc
Q 042091 777 FASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHR 856 (1023)
Q Consensus 777 ~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~ 856 (1023)
|+.+++++++||++|+||+|++.|+++.|+..+.+.+++.++..+.||+++|+||+|+++|.+|+++|++|||++++|++
T Consensus 663 ~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~ 742 (884)
T TIGR01522 663 FATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRK 742 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhC
Confidence 99999999999999999999999999999999999889999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccc
Q 042091 857 LPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEIN 936 (1023)
Q Consensus 857 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~ 936 (1023)
||++++++++++.||+.++++++++.++.+++++.... .+ .....++|++|++|+++|+||.+++|+. +.+
T Consensus 743 ~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~----~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~ 813 (884)
T TIGR01522 743 PPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQ----DG----VITARDTTMTFTCFVFFDMFNALACRSQ-TKS 813 (884)
T ss_pred CCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHc----CC----cchhhHHHHHHHHHHHHHHHHHHHHccC-Ccc
Confidence 99999999999999999999999988776555443211 01 1124568999999999999999999996 456
Q ss_pred eee-cCcchHHHHHHHHHHHHHHHHHH--HHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 042091 937 VFT-GVTKNYLFMGIIGITCVLQIIII--EFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVP 1002 (1023)
Q Consensus 937 ~~~-~~~~n~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 1002 (1023)
+|+ ++++|++++.++++++++|++++ |+++.+|++.|+++.+|+++++++++.+++.|++|+++|.
T Consensus 814 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 814 VFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred ccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 776 78899999999999999997664 6899999999999999999999999999999999998764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-136 Score=1297.08 Aligned_cols=878 Identities=26% Similarity=0.356 Sum_probs=742.4
Q ss_pred hhhhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 042091 87 AHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKT 166 (1023)
Q Consensus 87 ~~~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~ 166 (1023)
-..|....+++.+.|+++..+||+++ |+.+|+++||+|+++.++.+++|+.++++|.++++++|+++++++++.....
T Consensus 15 ~~~~~~~~~~~~~~l~t~~~~GLs~~--e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 15 MDDHKLSLDELERKYGTDLSKGLSAA--RAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred CCchhCCHHHHHHHhCcCcccCCCHH--HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 34566779999999999998999998 8999999999999998888999999999999999999999999977653321
Q ss_pred C-----CCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCC
Q 042091 167 E-----GVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGD 241 (1023)
Q Consensus 167 ~-----~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd 241 (1023)
+ .....|++++.+++++++..+++.++++++++..+++++..+ .+++|+|||++++|+++||||||+|.|++||
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~-~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd 171 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVP-QQALVIRDGEKMSINAEQVVVGDLVEVKGGD 171 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CeeEEEECCEEEEeeHHHCCCCCEEEECCCC
Confidence 1 122478999888888888888899999999999999988765 6899999999999999999999999999999
Q ss_pred ccCccEEEEeeCCeEEeeccccCCCceeccCCCC---------CeeeccceEeecceeEEEEEEecccHHHHHHhhcccC
Q 042091 242 QVPADGVLVTGHSLAIDESSMTGESKIVRKDHKT---------PFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISED 312 (1023)
Q Consensus 242 ~VPaDgill~g~~l~VDES~LTGES~pv~K~~~~---------~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 312 (1023)
+|||||++++|++|.||||+|||||.|+.|.+++ |++|+||.|.+|.+.++|++||.+|++|++.+.+.+.
T Consensus 172 ~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 251 (997)
T TIGR01106 172 RIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGL 251 (997)
T ss_pred EEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhc
Confidence 9999999999988899999999999999997753 4799999999999999999999999999999998887
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhh
Q 042091 313 NGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQV 392 (1023)
Q Consensus 313 ~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 392 (1023)
+.+++|+|+++++++..+..+++++++++++++.. .+. .+...+..+ +
T Consensus 252 ~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----------------------~~~~~~~~~-------i 299 (997)
T TIGR01106 252 ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---LGY----------------------TWLEAVIFL-------I 299 (997)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcC----------------------CHHHHHHHH-------H
Confidence 78899999999999999988877777666554422 111 034555666 8
Q ss_pred hhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCC--
Q 042091 393 TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDD-- 470 (1023)
Q Consensus 393 ~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~-- 470 (1023)
++++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.++++++..+.....
T Consensus 300 ~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~ 379 (997)
T TIGR01106 300 GIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTED 379 (997)
T ss_pred HHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccC
Confidence 899999999999999999999999999999999999999999999999999999999999999999987654432110
Q ss_pred ----CCcccHHHHHHHHHHHHccCCCcccccCCCC----ceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCC
Q 042091 471 ----SSQMHSIVIYLLSEGIAQNTTGNVFVPKDGE----AVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNS 542 (1023)
Q Consensus 471 ----~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s 542 (1023)
.........+.+...++.|+++... .++++ ..+..|||+|.||++++.+.+.+....+..+++++.+||+|
T Consensus 380 ~~~~~~~~~~~~~~~ll~~~alcn~~~~~-~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s 458 (997)
T TIGR01106 380 QSGVSFDKSSATWLALSRIAGLCNRAVFK-AGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNS 458 (997)
T ss_pred CCCccCCcccHHHHHHHHHHHHcCCCeec-cccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCC
Confidence 0011112232333445555544331 11111 23567999999999999877666666777889999999999
Q ss_pred CCceEEEEEeec---CCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhcccccc
Q 042091 543 EKKRGGVAVKRI---NSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDK 618 (1023)
Q Consensus 543 ~~k~msviv~~~---~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~ 618 (1023)
+||+|+++++.. ++++++++|||||.|+++|++++ .+|...+++++. +.+++.+++|+++|+||+++|||.+.++
T Consensus 459 ~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~ 537 (997)
T TIGR01106 459 TNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDE 537 (997)
T ss_pred CCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcc
Confidence 999999987643 34688999999999999999876 567778888876 8899999999999999999999987432
Q ss_pred C------------CCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC----
Q 042091 619 W------------TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE---- 682 (1023)
Q Consensus 619 ~------------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~---- 682 (1023)
+ +..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++|+.+++.+
T Consensus 538 ~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~ 617 (997)
T TIGR01106 538 QFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVED 617 (997)
T ss_pred cccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhh
Confidence 1 123789999999999999999999999999999999999999999999999999999754321
Q ss_pred ---------------CCCCeeeechhhhccCHHHHHHHHhhce--EeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHH
Q 042091 683 ---------------ANDPNIIEGKVFRALSDKEREKVAQEIT--VMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAP 745 (1023)
Q Consensus 683 ---------------~~~~~vi~g~~~~~l~~~~~~~~~~~~~--v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~ 745 (1023)
.+...+++|++++.++++++++.+.++. ||||++|+||.++|+.+|++|++|+|+|||+||+|
T Consensus 618 i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~p 697 (997)
T TIGR01106 618 IAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSP 697 (997)
T ss_pred hhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHH
Confidence 1124799999999999999999998874 99999999999999999999999999999999999
Q ss_pred HhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q 042091 746 ALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLN 825 (1023)
Q Consensus 746 aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~ 825 (1023)
|||+||||||||.+|+|+||++||++++||+|+++++++++||++|.|++|+++|+++.|+..+++.+++.++..++||+
T Consensus 698 aLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~ 777 (997)
T TIGR01106 698 ALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLG 777 (997)
T ss_pred HHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhH
Confidence 99999999999988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCC-CCCCcchHHHHHH-HHHHHHHHHHHHHHHHhhhc--------c
Q 042091 826 AVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGR-KEPLITNIMWRNL-IVQALYQVTVLLVLNFKGTS--------I 895 (1023)
Q Consensus 826 ~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~--------~ 895 (1023)
++|+||+|+++|++|+++|++|||++++|+|||+.+ ..+++++.+|..+ +..+++++++.++.++.... .
T Consensus 778 ~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~ 857 (997)
T TIGR01106 778 TITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHL 857 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccc
Confidence 999999999999999999999999999999999984 6899998776554 44576776555544332211 1
Q ss_pred cccc--cc-----cc--cc-----------ccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHH
Q 042091 896 LHLE--GE-----RR--QH-----------ASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITC 955 (1023)
Q Consensus 896 ~~~~--~~-----~~--~~-----------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~ 955 (1023)
+.+. .. +. .. .....+|++|++++++|+||.+++|+. +.++|++.++|++++.++++.+
T Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~-~~~~f~~~~~n~~l~~~~~~~~ 936 (997)
T TIGR01106 858 VGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTR-RNSVFQQGMKNKILIFGLFEET 936 (997)
T ss_pred cccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccC-cccccccCCcCHHHHHHHHHHH
Confidence 1110 00 00 00 011568999999999999999999995 4577765589999888888777
Q ss_pred HHHHH--HHHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 042091 956 VLQII--IIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVP 1002 (1023)
Q Consensus 956 ~~~~~--~v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 1002 (1023)
+++++ ++|+++.+|++.|+++.+|+++++++++.++++++.|++.|+
T Consensus 937 ~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~ 985 (997)
T TIGR01106 937 ALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRR 985 (997)
T ss_pred HHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77654 367789999999999999999999999999999999998764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-135 Score=1269.20 Aligned_cols=852 Identities=35% Similarity=0.530 Sum_probs=731.6
Q ss_pred HHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccch
Q 042091 96 GLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYD 175 (1023)
Q Consensus 96 ~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~ 175 (1023)
.+...+.++..+||+++ ++.+|++.||.|+++..+..++|..++.+|.+++..+|+++++++++.+.+..+. .+
T Consensus 32 ~~~~~~~~~~~~GLs~~--e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 32 ELLLELFTSPTTGLSEE--EVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred hHHHhhcCCcccCCCHH--HHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 56677778888999996 8999999999999999989999999999999999999999999999988432110 44
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCe
Q 042091 176 GASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSL 255 (1023)
Q Consensus 176 ~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l 255 (1023)
...++..++++.++..++++++++..++++++.+ .+++|+|||++++|+++||||||||.|++||+||||++|++++++
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~-~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMSS-PKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 4567777788888999999999999999998875 799999999999999999999999999999999999999999988
Q ss_pred EEeeccccCCCceeccCC-------------CCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHH
Q 042091 256 AIDESSMTGESKIVRKDH-------------KTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVR 322 (1023)
Q Consensus 256 ~VDES~LTGES~pv~K~~-------------~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~ 322 (1023)
+||||+|||||.|+.|.+ .+|++|+||.|.+|.+.++|++||.+|+.|++.+.+......+||+|++
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 999999999999999973 3678999999999999999999999999999999999876789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCc
Q 042091 323 LNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEG 402 (1023)
Q Consensus 323 l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~ 402 (1023)
++++..++..++++++++++++.. +.++ + ++...|..+ ++++++++|+|
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~~---~~~~---~------------------~~~~~~~~~-------v~l~va~IPeg 313 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVGL---FRGG---N------------------GLLESFLTA-------LALAVAAVPEG 313 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HhcC---c------------------cHHHHHHHH-------HHHHHhccccc
Confidence 999999999998888888777652 2211 0 045677777 99999999999
Q ss_pred hhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHH
Q 042091 403 LPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLL 482 (1023)
Q Consensus 403 L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll 482 (1023)
||+.++++++.++++|+++++++|+++++|+||++|+||||||||||+|+|+|++++..+...+.........+...+++
T Consensus 314 Lp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (917)
T COG0474 314 LPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFL 393 (917)
T ss_pred hHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998411111111111122233333
Q ss_pred HHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCC--ChhcccccccEEEEecCCCCCceEEEEEeecCCeEEE
Q 042091 483 SEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGM--KFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHV 560 (1023)
Q Consensus 483 ~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~--~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~ 560 (1023)
. .++.||+.... .+ + ++..|||+|.||++++.+.|. +....+..+++++++||+|+||||+++++.+++++++
T Consensus 394 ~-~~~lc~~~~~~--~~-~-~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~ 468 (917)
T COG0474 394 L-AAALCNSVTPE--KN-G-WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYIL 468 (917)
T ss_pred H-HHHhcCccccc--cc-C-ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEE
Confidence 3 34444443331 11 2 678999999999999999998 7777777889999999999999999999977777999
Q ss_pred EEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccccC-----CCCCCCcEEEeeeec
Q 042091 561 HWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKW-----TLPEEELILLAIVGI 634 (1023)
Q Consensus 561 ~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~-----~~~e~~l~~lG~i~~ 634 (1023)
++|||||.|+++|+.. +...+++++. +.+++..++|+++|||++++|||.++.+. +..|+|++|+|+++|
T Consensus 469 ~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~ 544 (917)
T COG0474 469 FVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGI 544 (917)
T ss_pred EEcCChHHHHHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhc
Confidence 9999999999999976 5566777777 89999999999999999999999775432 467899999999999
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR 714 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar 714 (1023)
+||||++++++|+.|++|||++||+||||+.||++||++||+...... ..+++|.+++.++++|+.+.++++.||||
T Consensus 545 ~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~---~~vi~G~el~~l~~~el~~~~~~~~VfAR 621 (917)
T COG0474 545 EDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAES---ALVIDGAELDALSDEELAELVEELSVFAR 621 (917)
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCc---eeEeehHHhhhcCHHHHHHHhhhCcEEEE
Confidence 999999999999999999999999999999999999999999864321 57999999999999999999999999999
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhh
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANI 794 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i 794 (1023)
++|+||.++|+.||++|++|+|+|||+||+||||+||||||||++|+|+||++||+++.+++|..++.+++|||++|.|+
T Consensus 622 vsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni 701 (917)
T COG0474 622 VSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNI 701 (917)
T ss_pred cCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHH
Q 042091 795 QKFIQFQLTVNVAALLINVVAAISSGD-VPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRN 873 (1023)
Q Consensus 795 ~~~i~~~l~~nv~~i~~~~~~~~~~~~-~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~ 873 (1023)
+|++.|.+++|+..+++.+++.+++.+ .||+++|++|+|+++|.+|+++|+.++|+.+.|++||++++++++++..++.
T Consensus 702 ~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~ 781 (917)
T COG0474 702 KKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWR 781 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHH
Confidence 999999999999999999999888877 8999999999999999999999999999999999999999999999888878
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccccccccc-ccccchhHHHHHHHHHHHHhhcccCCCCccceee-cCcchHHHHHHH
Q 042091 874 LIVQALYQVTVLLVLNFKGTSILHLEGERRQH-ASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFT-GVTKNYLFMGII 951 (1023)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~ 951 (1023)
++++..++++++.++.|............... .....+|+.|+.++++|.++.+.+|.... +++. +++.|+.+++++
T Consensus 782 ~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~~~ 860 (917)
T COG0474 782 FILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGR-PFLSSLLFSNKYLWLAL 860 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-chhhcccccCHHHHHHH
Confidence 67776666666665554433322211110011 14667899999999999999999998653 4444 568999999888
Q ss_pred HHHHHHHHHH--HHHHH-HcccCCCCCHHHHHHHHHHHHHH--HHHHHHhhh
Q 042091 952 GITCVLQIII--IEFLG-KFTKTVKLDWKLWLASIGIGLFS--WPLAVLGKM 998 (1023)
Q Consensus 952 ~~~~~~~~~~--v~~~~-~~~~~~~l~~~~w~~~~~~~~~~--~~~~~~~k~ 998 (1023)
+++.++++++ +++.. ..|...+++...|++++++.... +...+..|.
T Consensus 861 ~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (917)
T COG0474 861 LVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLLYIVVSELYKL 912 (917)
T ss_pred HHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877665 35566 68999999999999998887433 344444444
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-132 Score=1236.66 Aligned_cols=825 Identities=24% Similarity=0.302 Sum_probs=696.6
Q ss_pred hhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--
Q 042091 89 AQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKT-- 166 (1023)
Q Consensus 89 ~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~-- 166 (1023)
.|....+++.+.|+++ .+|||++ |+++|+++||+|+++.++.+++|+.++++|++++.++|+++++++++.+.+.
T Consensus 27 ~~~~~~~~v~~~l~~~-~~GLs~~--ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~ 103 (903)
T PRK15122 27 EAANSLEETLANLNTH-RQGLTEE--DAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPL 103 (903)
T ss_pred HHhCCHHHHHHHhCCC-CCCCCHH--HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc
Confidence 3445578899999999 4899998 8999999999999998888999999999999999999999999999887542
Q ss_pred -CCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEEC------CEEEEEEeccceeccEEEecC
Q 042091 167 -EGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRG------GKAVKISIFDVVVGEIVPLRI 239 (1023)
Q Consensus 167 -~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~------g~~~~I~~~dLv~GDIV~l~~ 239 (1023)
.+....|.+++.|++++++..+++.+++++++++.++|.+..+ ..++|+|| |++++|+++||||||+|.|++
T Consensus 104 ~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~-~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~ 182 (903)
T PRK15122 104 RRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVR-TTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSA 182 (903)
T ss_pred cCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CceEEEECCccCCCCeEEEEEHHHCCCCCEEEECC
Confidence 1222368999989888999999999999999999999998875 68999999 489999999999999999999
Q ss_pred CCccCccEEEEeeCCeEEeeccccCCCceeccCC--C--------------------CCeeeccceEeecceeEEEEEEe
Q 042091 240 GDQVPADGVLVTGHSLAIDESSMTGESKIVRKDH--K--------------------TPFLMSGCKVADGVGTMMVTGVG 297 (1023)
Q Consensus 240 Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~--~--------------------~~~l~aGt~v~~G~~~~~V~~tG 297 (1023)
||+|||||+|++|+++.||||+|||||.|+.|.+ + .+++|+||.|.+|+++++|++||
T Consensus 183 Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG 262 (903)
T PRK15122 183 GDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATG 262 (903)
T ss_pred CCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEec
Confidence 9999999999999989999999999999999974 1 26799999999999999999999
Q ss_pred cccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHH
Q 042091 298 INTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGV 377 (1023)
Q Consensus 298 ~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (1023)
.+|++|++.+++.+ ...++|+|+++++++.++..+++.++.+++++... .. . ++
T Consensus 263 ~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~---~~---~-------------------~~ 316 (903)
T PRK15122 263 SRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGF---TK---G-------------------DW 316 (903)
T ss_pred cccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhh---cc---C-------------------CH
Confidence 99999999999877 56789999999999998887766665544433211 11 0 14
Q ss_pred HHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEE
Q 042091 378 IKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVE 457 (1023)
Q Consensus 378 ~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~ 457 (1023)
...+..+ +++++++|||+||++++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+
T Consensus 317 ~~~l~~a-------isl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~ 389 (903)
T PRK15122 317 LEALLFA-------LAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEH 389 (903)
T ss_pred HHHHHHH-------HHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEE
Confidence 5667777 999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEE
Q 042091 458 AFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHV 537 (1023)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~ 537 (1023)
++..+. . ..+ +++..+.. |+.. + ..++||+|.|+++++.+.+.. .....++.+++
T Consensus 390 ~~~~~~-~--------~~~---~~l~~a~l-~s~~-----~-----~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~ 444 (903)
T PRK15122 390 HLDVSG-R--------KDE---RVLQLAWL-NSFH-----Q-----SGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDE 444 (903)
T ss_pred EEcCCC-C--------ChH---HHHHHHHH-hCCC-----C-----CCCCChHHHHHHHHHHHcCch--hhhhcCceEEE
Confidence 864221 0 011 22222222 2110 0 126899999999999876643 22345778899
Q ss_pred ecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhcccc
Q 042091 538 FPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFIL 616 (1023)
Q Consensus 538 ~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~ 616 (1023)
+||++.+|+|+++++..++++++++|||||.|+++|+++. .+|...+++++. +++.+.+++++.+|+|++++|||.++
T Consensus 445 ~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~ 523 (903)
T PRK15122 445 LPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIP 523 (903)
T ss_pred eeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccC
Confidence 9999999999999987677788999999999999999765 356667787766 78889999999999999999999875
Q ss_pred ccC------CCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee
Q 042091 617 DKW------TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE 690 (1023)
Q Consensus 617 ~~~------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~ 690 (1023)
.+. +..|+|++|+|+++++||+|||++++|++|+++||+++|+||||+.||.+||+++||.. ..+++
T Consensus 524 ~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~-------~~vi~ 596 (903)
T PRK15122 524 GGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP-------GEPLL 596 (903)
T ss_pred ccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC-------CCccc
Confidence 422 12577999999999999999999999999999999999999999999999999999963 25899
Q ss_pred chhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCc
Q 042091 691 GKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI 770 (1023)
Q Consensus 691 g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adi 770 (1023)
|++++.++++++++.++++.||||++|+||.++|+.||++|++|+|+|||+||+||||+|||||||| +|+|+||++||+
T Consensus 597 G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADi 675 (903)
T PRK15122 597 GTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADI 675 (903)
T ss_pred hHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCC
Q 042091 771 IILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPT 850 (1023)
Q Consensus 771 il~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~ 850 (1023)
+++||||++|++++++||++|+||+|++.|.++.|+..++..+++.++..+.|++|+|+||+|+++|. |+++|++|||+
T Consensus 676 VLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~ 754 (903)
T PRK15122 676 ILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMD 754 (903)
T ss_pred EEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCC
Confidence 99999999999999999999999999999999999999888888777777789999999999999995 89999999999
Q ss_pred ccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccC
Q 042091 851 DHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNAR 930 (1023)
Q Consensus 851 ~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r 930 (1023)
+++| |||++++++++++.+++..+..+++..+. +++.++.. .. +. .......+|..|.+++++|+++.+++|
T Consensus 755 ~~~m-~~P~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~---~~-~~--~~~~~~~~t~~f~~l~~~q~~~~~~~R 826 (903)
T PRK15122 755 KEFL-RKPRKWDAKNIGRFMLWIGPTSSIFDITT-FALMWFVF---AA-NS--VEMQALFQSGWFIEGLLSQTLVVHMLR 826 (903)
T ss_pred Hhhc-CCCCCCChhhhHHHHHHHHHHHHHHHHHH-HHHHHHHh---cc-Cc--HhhhhhhHHHHHHHHHHHHHHHHHhhC
Confidence 9999 99999999999998875333333332222 22222111 11 10 000112467889999999999999999
Q ss_pred CCCccceeecCcchHHHHHHHHHHHHHHHH--HHHH--HHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 042091 931 KPDEINVFTGVTKNYLFMGIIGITCVLQII--IIEF--LGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKM 998 (1023)
Q Consensus 931 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~v~~--~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~ 998 (1023)
+.+. ++ |+|++.+..++++++++++ ++|+ ++.+|++.|+++.+|+++++++++.+++.++.|.
T Consensus 827 ~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~ 893 (903)
T PRK15122 827 TQKI-PF----IQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKR 893 (903)
T ss_pred cCCC-Cc----CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8642 33 4455444444455555543 4565 8999999999999999999999999999988884
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-131 Score=1239.99 Aligned_cols=835 Identities=31% Similarity=0.468 Sum_probs=711.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCCCc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEE
Q 042091 140 LWEAWQDLTLIILIVAAIASLALGIKTEGVE--EGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMR 217 (1023)
Q Consensus 140 l~~~~~~~~~~~ll~~ails~~~~~~~~~~~--~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R 217 (1023)
+++||+++++++|++++++|+++++..++.. ..|++++.|+++++++..++.++++++++.+++|.+..+ .+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~-~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYES-EHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CceEEEE
Confidence 4689999999999999999999987653322 479999999999999999999999999999999988764 6899999
Q ss_pred CCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCC------------CCeeeccceEe
Q 042091 218 GGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHK------------TPFLMSGCKVA 285 (1023)
Q Consensus 218 ~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~------------~~~l~aGt~v~ 285 (1023)
||++++|+++||||||+|.|++||+|||||++++|++|.||||+|||||.|+.|.++ ++++|+||.|.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998899999999999999999764 27899999999
Q ss_pred ecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccccc
Q 042091 286 DGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVK 365 (1023)
Q Consensus 286 ~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (1023)
+|.++++|++||.+|++|++.+++.+.+.+++|+|+++++++.+++.+.+++++++++++..++.. +...
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~-----~~~~----- 229 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFND-----PALG----- 229 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cccc-----
Confidence 999999999999999999999999888888999999999999999887777777666554332210 0000
Q ss_pred ccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCc
Q 042091 366 GRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKT 445 (1023)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKT 445 (1023)
...+..+...+..+ +++++++|||+||+++++++++++++|+++|+++|+++++|+||++|+||||||
T Consensus 230 -----~~~~~~~~~~~~~~-------i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKT 297 (917)
T TIGR01116 230 -----GGWIQGAIYYFKIA-------VALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKT 297 (917)
T ss_pred -----chhHHHHHHHHHHH-------HhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCC
Confidence 01112345556666 899999999999999999999999999999999999999999999999999999
Q ss_pred cccccCceEEEEEEeCCcc-------------cCCCCCC-C------cccHHHHHHHHHHHHccCCCcccccCCCCceee
Q 042091 446 GTLTLNEMTVVEAFIGRKK-------------INPPDDS-S------QMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEV 505 (1023)
Q Consensus 446 GTLT~n~m~v~~~~~~~~~-------------~~~~~~~-~------~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~ 505 (1023)
||||+|+|+|.+++..+.. +.+.+.. . .......+.+..+.+.|++.....+++++....
T Consensus 298 GTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~ 377 (917)
T TIGR01116 298 GTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEK 377 (917)
T ss_pred ccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceee
Confidence 9999999999999876421 1110000 0 001112233334445555544422222222345
Q ss_pred cCChHHHHHHHHHHHcCCChhc----------------ccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHH
Q 042091 506 SGSPTEKAILSWAVKLGMKFDR----------------VRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMI 569 (1023)
Q Consensus 506 ~g~p~e~All~~a~~~g~~~~~----------------~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~i 569 (1023)
.|||+|.||++++.+.|.+... .++.+++++++||+|+||||+++++. ++++++|+|||||.|
T Consensus 378 ~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~i 456 (917)
T TIGR01116 378 VGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGV 456 (917)
T ss_pred ccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHH
Confidence 6999999999999988876542 23457799999999999999999985 466889999999999
Q ss_pred HHhhccccccCCccccCCchH-HHHHHHHHHHHh-ccchhhhhhhcccccc-----------CCCCCCCcEEEeeeeccC
Q 042091 570 LASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAA-RSLRCVAIAYRFILDK-----------WTLPEEELILLAIVGIKD 636 (1023)
Q Consensus 570 l~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~-~glr~l~~ayk~~~~~-----------~~~~e~~l~~lG~i~~~D 636 (1023)
+++|++++..+|...+++++. +++++.+++|++ +|+||+++|||.+.++ .+..|++++|+|+++++|
T Consensus 457 l~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~D 536 (917)
T TIGR01116 457 LERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLD 536 (917)
T ss_pred HHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeC
Confidence 999998877778878888776 889999999999 9999999999998532 133588999999999999
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
|+|++++++|+.|+++|++++|+|||+..||.++|+++|+..++.+ .....++|++++.++++++.+...+..||||++
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~-v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDED-VTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcc-ccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 9999999999999999999999999999999999999999854321 123578999999999999999999999999999
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQK 796 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~ 796 (1023)
|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||| +|++++|++||+++.+|+|.++++++++||++|+|+++
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k 694 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQ 694 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHH
Q 042091 797 FIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIV 876 (1023)
Q Consensus 797 ~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~ 876 (1023)
+++|.+++|+..+++.+++.++..+.||+++|++|+|+++|.+|+++|+.++|++++|++||+.++++++++.+|+.+++
T Consensus 695 ~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~ 774 (917)
T TIGR01116 695 FIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLV 774 (917)
T ss_pred HHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHH
Confidence 99999999999999999998888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccccc---------cc-c------ccccccchhHHHHHHHHHHHHhhcccCCCCccceee-
Q 042091 877 QALYQVTVLLVLNFKGTSILHLEG---------ER-R------QHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFT- 939 (1023)
Q Consensus 877 ~~~~~~~~~~~l~~~~~~~~~~~~---------~~-~------~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~- 939 (1023)
+|++++++.++.+++.....+..+ .+ . ......++|++|++++++|+||.+++|+.+ .++|+
T Consensus 775 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~-~~~~~~ 853 (917)
T TIGR01116 775 VGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSED-QSLLRM 853 (917)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCc-cccccc
Confidence 999999775443332221101100 00 0 012346789999999999999999999964 56665
Q ss_pred cCcchHHHHHHHHHHHHHHHHH--HHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccC
Q 042091 940 GVTKNYLFMGIIGITCVLQIII--IEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPV 1001 (1023)
Q Consensus 940 ~~~~n~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 1001 (1023)
++++|+++++++++++++|+++ +|+++.+|++.|++|.+|+++++++++.+++++++|+++|
T Consensus 854 ~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 854 PPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7789999999999999999876 7899999999999999999999999999999999998763
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-130 Score=1219.35 Aligned_cols=813 Identities=25% Similarity=0.333 Sum_probs=682.8
Q ss_pred CHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccc
Q 042091 93 RVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEG 172 (1023)
Q Consensus 93 ~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~ 172 (1023)
..+++.+.++++. +||+++ |+++|+++||+|+++.++.+++|+.++++|+++++++++++++++++.+ .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~--ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEA--EVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHH--HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 4788999999986 699988 8999999999999999888999999999999999999999999998876 7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEEC------CEEEEEEeccceeccEEEecCCCccCcc
Q 042091 173 WYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRG------GKAVKISIFDVVVGEIVPLRIGDQVPAD 246 (1023)
Q Consensus 173 ~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~------g~~~~I~~~dLv~GDIV~l~~Gd~VPaD 246 (1023)
|.+++.|++++++..+++.++++++++..++|.+..+ .+++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~-~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVS-NTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 8899888888888899999999999999999998876 68999999 7899999999999999999999999999
Q ss_pred EEEEeeCCeEEeeccccCCCceeccCCCC------------CeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCC
Q 042091 247 GVLVTGHSLAIDESSMTGESKIVRKDHKT------------PFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNG 314 (1023)
Q Consensus 247 gill~g~~l~VDES~LTGES~pv~K~~~~------------~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 314 (1023)
|+|++|+++.||||+|||||.|+.|.+++ +++|+||.|.+|.++++|++||.+|++|++.+.+.++..
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999998754 479999999999999999999999999999999998888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhh
Q 042091 315 EETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTI 394 (1023)
Q Consensus 315 ~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~i 394 (1023)
+++|+|+.++++++++..++++++.++++++.. .+. ++...+.++ +++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~---~~~----------------------~~~~~l~~a-------lsv 328 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY---TKG----------------------DWWEAALFA-------LSV 328 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---hcC----------------------CHHHHHHHH-------HHH
Confidence 899999999999999888877777665554321 110 145566677 999
Q ss_pred hhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcc
Q 042091 395 VVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQM 474 (1023)
Q Consensus 395 lv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 474 (1023)
++++|||+||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.++.... +. .
T Consensus 329 ~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~------~~---~ 399 (902)
T PRK10517 329 AVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS------GK---T 399 (902)
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC------CC---C
Confidence 99999999999999999999999999999999999999999999999999999999999998864210 00 0
Q ss_pred cHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeec
Q 042091 475 HSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRI 554 (1023)
Q Consensus 475 ~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~ 554 (1023)
.+ +++..+.. |+.. . ...+||+|.|+++++...+ .......++.++++||+|++|+|+++++..
T Consensus 400 ~~---~ll~~a~l-~~~~----~------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~ 463 (902)
T PRK10517 400 SE---RVLHSAWL-NSHY----Q------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAEN 463 (902)
T ss_pred HH---HHHHHHHh-cCCc----C------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEEC
Confidence 11 23322222 2211 0 1258999999999987543 112334677889999999999999998877
Q ss_pred CCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccccC----CCCCCCcEEE
Q 042091 555 NSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKW----TLPEEELILL 629 (1023)
Q Consensus 555 ~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~----~~~e~~l~~l 629 (1023)
++.+.+++||+||.|+++|+++. .+|...+++++. +++.+..++++++|+|++++|||.++.+. ...|+|++|+
T Consensus 464 ~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~l 542 (902)
T PRK10517 464 TEHHQLICKGALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILE 542 (902)
T ss_pred CCeEEEEEeCchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceee
Confidence 77788999999999999999775 355667777766 78888899999999999999999875321 1236799999
Q ss_pred eeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhc
Q 042091 630 AIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEI 709 (1023)
Q Consensus 630 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~ 709 (1023)
|+++|+||+||+++++|++|+++||+|+|+||||+.||.+||+++||.. ..+++|++++.++++++++.++++
T Consensus 543 Gli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~-------~~v~~G~el~~l~~~el~~~~~~~ 615 (902)
T PRK10517 543 GYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA-------GEVLIGSDIETLSDDELANLAERT 615 (902)
T ss_pred ehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-------cCceeHHHHHhCCHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999953 368999999999999999999999
Q ss_pred eEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHH
Q 042091 710 TVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRS 789 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~ 789 (1023)
.||||++|+||.++|+.||++|++|+|+|||+||+||||+|||||||| +|+|+||++||++++||+|.+|++++++||+
T Consensus 616 ~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~ 694 (902)
T PRK10517 616 TLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRR 694 (902)
T ss_pred cEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchH
Q 042091 790 VFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNI 869 (1023)
Q Consensus 790 ~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~ 869 (1023)
+|+||+|++.|.++.|+..++..+++.++..+.||+|+|+||+|+++| +|+++|++|||++++|++||+.+ ...+
T Consensus 695 i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~~-~~~~--- 769 (902)
T PRK10517 695 TFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRWN-PADL--- 769 (902)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCCC-HHHH---
Confidence 999999999999999999999888887776668999999999999999 68999999999999999999732 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHH
Q 042091 870 MWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMG 949 (1023)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~ 949 (1023)
++.++..+++.++..+..++..++.++... .......+|..|.+++++|+++.+++|+.+. ++|+|++.+.
T Consensus 770 -~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~-----~~~~~~~~~~ 840 (902)
T PRK10517 770 -GRFMVFFGPISSIFDILTFCLMWWVFHANT---PETQTLFQSGWFVVGLLSQTLIVHMIRTRRI-----PFIQSRAAWP 840 (902)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHccccc---hhhHhHHHHHHHHHHHHHHHHHHHhhccCCC-----CcccchHHHH
Confidence 333344444443322222211111111100 0001123455699999999999999998642 4456666666
Q ss_pred HHHHHHHHHHH--HHH--HHHHcccCCCCC--HHHHHHHHHHHHHHHHHHHHhhhc
Q 042091 950 IIGITCVLQII--IIE--FLGKFTKTVKLD--WKLWLASIGIGLFSWPLAVLGKMI 999 (1023)
Q Consensus 950 ~~~~~~~~~~~--~v~--~~~~~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~k~~ 999 (1023)
.++++++++++ ++| +++.+|++.+++ +..|+++++++++ ++.+++|.+
T Consensus 841 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~ 894 (902)
T PRK10517 841 LMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGF 894 (902)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHH
Confidence 66666655543 355 788999999999 7888888887776 556777753
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-129 Score=1214.20 Aligned_cols=813 Identities=23% Similarity=0.310 Sum_probs=685.3
Q ss_pred CCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcc
Q 042091 92 IRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEE 171 (1023)
Q Consensus 92 ~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~ 171 (1023)
...+++.+.|+++. +||+++ |+.+|+++||+|+++.++.+++|++++++|.++++++|+++++++++.+
T Consensus 18 ~~~~~~~~~l~~~~-~GLs~~--ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~-------- 86 (867)
T TIGR01524 18 MGKETLLRKLGVHE-TGLTNV--EVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD-------- 86 (867)
T ss_pred CCHHHHHHHhCCCC-CCCCHH--HHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------
Confidence 45788999999985 799988 8999999999999998888899999999999999999999999999875
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEE------CCEEEEEEeccceeccEEEecCCCccCc
Q 042091 172 GWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMR------GGKAVKISIFDVVVGEIVPLRIGDQVPA 245 (1023)
Q Consensus 172 ~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R------~g~~~~I~~~dLv~GDIV~l~~Gd~VPa 245 (1023)
.|++++.+++++++..+++.+++++++++.++|++..+ ..++|+| ||++++|+++||||||+|.|++||+|||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~-~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVK-NTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 78899889888999999999999999999999988775 6899999 9999999999999999999999999999
Q ss_pred cEEEEeeCCeEEeeccccCCCceeccCCCC------------CeeeccceEeecceeEEEEEEecccHHHHHHhhcccCC
Q 042091 246 DGVLVTGHSLAIDESSMTGESKIVRKDHKT------------PFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDN 313 (1023)
Q Consensus 246 Dgill~g~~l~VDES~LTGES~pv~K~~~~------------~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 313 (1023)
||++++|+++.||||+|||||.|+.|.+++ +++|+||.|.+|.++++|++||.+|++|++.+.+.+ .
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~ 244 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-R 244 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-C
Confidence 999999988999999999999999998764 479999999999999999999999999999999988 6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhh
Q 042091 314 GEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVT 393 (1023)
Q Consensus 314 ~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ 393 (1023)
.+++|+|++++++++++..++++++.++++++.. .+. ++...+..+ ++
T Consensus 245 ~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~~~----------------------~~~~~~~~a-------l~ 292 (867)
T TIGR01524 245 RGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---MKG----------------------DWLEAFLFA-------LA 292 (867)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---hcC----------------------CHHHHHHHH-------HH
Confidence 6789999999999999988887777666554321 110 145566777 99
Q ss_pred hhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCc
Q 042091 394 IVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQ 473 (1023)
Q Consensus 394 ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~ 473 (1023)
+++++|||+||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|++++.... .
T Consensus 293 l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~----~----- 363 (867)
T TIGR01524 293 VAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG----E----- 363 (867)
T ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC----C-----
Confidence 9999999999999999999999999999999999999999999999999999999999999998753111 0
Q ss_pred ccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEee
Q 042091 474 MHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKR 553 (1023)
Q Consensus 474 ~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~ 553 (1023)
..+ +++..+.+ |+.. + ..++||+|.|+++++.+.. ....+..++.++.+||+|++|+|+++++.
T Consensus 364 ~~~---~~l~~a~l-~~~~-----~-----~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~ 427 (867)
T TIGR01524 364 TSE---RVLKMAWL-NSYF-----Q-----TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVEN 427 (867)
T ss_pred CHH---HHHHHHHH-hCCC-----C-----CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEc
Confidence 011 22322222 2211 0 1257999999999987542 22334467888999999999999999886
Q ss_pred cCCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccccC----CCCCCCcEE
Q 042091 554 INSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKW----TLPEEELIL 628 (1023)
Q Consensus 554 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~----~~~e~~l~~ 628 (1023)
+++.+++++||+||.|+++|+++. .+|...+++++. +++++.+++++++|+|++++|||++..+. +..|++++|
T Consensus 428 ~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~ 506 (867)
T TIGR01524 428 RAEVTRLICKGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLII 506 (867)
T ss_pred CCceEEEEEeCcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEE
Confidence 666678999999999999998764 356666777765 78889999999999999999999875432 124678999
Q ss_pred EeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhh
Q 042091 629 LAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQE 708 (1023)
Q Consensus 629 lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~ 708 (1023)
+|+++++||+|||++++|++|+++||+++|+|||++.||.+||+++||.. ..+++|.+++.++++++.+.+++
T Consensus 507 lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~-------~~v~~g~~l~~~~~~el~~~~~~ 579 (867)
T TIGR01524 507 EGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA-------NDFLLGADIEELSDEELARELRK 579 (867)
T ss_pred EEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC-------CCeeecHhhhhCCHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999963 25899999999999999999999
Q ss_pred ceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHH
Q 042091 709 ITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGR 788 (1023)
Q Consensus 709 ~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR 788 (1023)
+.||||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+||++||++++||+|+++++++++||
T Consensus 580 ~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR 658 (867)
T TIGR01524 580 YHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGR 658 (867)
T ss_pred CeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcch
Q 042091 789 SVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITN 868 (1023)
Q Consensus 789 ~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~ 868 (1023)
++|+||+|+++|+++.|+..++..+++.++..+.||+++|+||+|+++| +|+++|++|||++++|++||+ ++++.+.+
T Consensus 659 ~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~~ 736 (867)
T TIGR01524 659 NTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMGR 736 (867)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHHH
Confidence 9999999999999999999999888888777678999999999999999 799999999999999987776 55654443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHH
Q 042091 869 IMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFM 948 (1023)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~ 948 (1023)
. ++..|++.+++.+..++..++.+...+. ......+|..|.+++++|+++.+++|+.+. ++|+|++.+
T Consensus 737 ~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~-----~~~~n~~~~ 804 (867)
T TIGR01524 737 F----MLCIGPVSSIFDIATFLLMWFVFSANTV---EEQALFQSGWFVVGLLSQTLVVHMIRTEKI-----PFIQSRAAA 804 (867)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHhcccch---hhhhHHHHHHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHH
Confidence 3 3344444433222211111111111110 011234688899999999999999998642 445688777
Q ss_pred HHHHHHHHHHHHH--HHH--HHHcccCCCC--CHHHHHHHHHHHHHHHHHHHHhhhc
Q 042091 949 GIIGITCVLQIII--IEF--LGKFTKTVKL--DWKLWLASIGIGLFSWPLAVLGKMI 999 (1023)
Q Consensus 949 ~~~~~~~~~~~~~--v~~--~~~~~~~~~l--~~~~w~~~~~~~~~~~~~~~~~k~~ 999 (1023)
..+++++++++++ +|+ ++.+|++.|+ ++..|+++++++++ ++.++.|.+
T Consensus 805 ~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~ 859 (867)
T TIGR01524 805 PVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTF 859 (867)
T ss_pred HHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHH
Confidence 7777777776554 455 4889999987 66778888887765 557777754
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-123 Score=1060.29 Aligned_cols=890 Identities=26% Similarity=0.376 Sum_probs=746.0
Q ss_pred hhHHHHHHHHhhhhhhhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHH
Q 042091 74 KEEEKEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILI 153 (1023)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll 153 (1023)
+.++..+.+..+....|...++++++.+.++..+||+.. ++.+++.+-|+|.+++|+..+-|..+.+|+...+.++++
T Consensus 24 ~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~--~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~ 101 (1019)
T KOG0203|consen 24 KKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQ--EAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLW 101 (1019)
T ss_pred hhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHH--HHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHH
Confidence 344455555556667888899999999999999999998 789999999999999999888999889999999999999
Q ss_pred HHHHHHHHhcccc-----CCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEecc
Q 042091 154 VAAIASLALGIKT-----EGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFD 228 (1023)
Q Consensus 154 ~~ails~~~~~~~-----~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~d 228 (1023)
++++++++.+... +-..+..|-+..+...+++..+...+++.+..+-.+..+.+.+ ..++|+|||+...+..+|
T Consensus 102 ~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P-~~~~ViRdg~k~~i~~ee 180 (1019)
T KOG0203|consen 102 IGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVP-QQALVIRDGEKMTINAEE 180 (1019)
T ss_pred HHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccch-hhheeeecceeEEechhh
Confidence 9988887655421 1123355555444333444445556667677766777777775 789999999999999999
Q ss_pred ceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCC---------CCCeeeccceEeecceeEEEEEEecc
Q 042091 229 VVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDH---------KTPFLMSGCKVADGVGTMMVTGVGIN 299 (1023)
Q Consensus 229 Lv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~---------~~~~l~aGt~v~~G~~~~~V~~tG~~ 299 (1023)
|||||+|.++-||+||||.+++++..|++|+|+|||||+|.++.+ ..|+-|.+|.+++|.++++|.+||.+
T Consensus 181 lVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~ 260 (1019)
T KOG0203|consen 181 LVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDR 260 (1019)
T ss_pred cccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCc
Confidence 999999999999999999999999999999999999999999876 25678999999999999999999999
Q ss_pred cHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHH
Q 042091 300 TEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIK 379 (1023)
Q Consensus 300 T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (1023)
|.+|++..+.......++|++..++.+..++..+++.+++..|++.+.. ++ .+++
T Consensus 261 Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~---gy----------------------~~l~ 315 (1019)
T KOG0203|consen 261 TVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL---GY----------------------EWLR 315 (1019)
T ss_pred eEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh---cc----------------------hhHH
Confidence 9999999998888889999999999999999888887777766554432 21 1345
Q ss_pred HHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEE
Q 042091 380 IVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAF 459 (1023)
Q Consensus 380 ~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~ 459 (1023)
++... ++++++.+|+||+..++.+++...+||++++++||++.+.|+||+.++||+|||||||+|+|+|.++|
T Consensus 316 avv~~-------i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw 388 (1019)
T KOG0203|consen 316 AVVFL-------IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLW 388 (1019)
T ss_pred Hhhhh-------heeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeec
Confidence 55545 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCcccCCCC--C----C-CcccHHHHHHHHHHHHccCCCcccccCCCC---ceeecCChHHHHHHHHHHHcCCChhccc
Q 042091 460 IGRKKINPPD--D----S-SQMHSIVIYLLSEGIAQNTTGNVFVPKDGE---AVEVSGSPTEKAILSWAVKLGMKFDRVR 529 (1023)
Q Consensus 460 ~~~~~~~~~~--~----~-~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~---~~~~~g~p~e~All~~a~~~g~~~~~~~ 529 (1023)
.++.....+. + . ...++....++ .+...|+.+.....+++- +....|++.|.||++++...-.+....|
T Consensus 389 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~-r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R 467 (1019)
T KOG0203|consen 389 FDNQIHEADTTEDQSGQSFDKSSATFIALS-RIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELR 467 (1019)
T ss_pred cCCceeeeechhhhhcccccccCchHHHHH-HHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHH
Confidence 9865332211 0 0 11123333444 444444444332222211 2356899999999999997766778888
Q ss_pred ccccEEEEecCCCCCceEEEEEeecC---CeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccc
Q 042091 530 SETTVLHVFPFNSEKKRGGVAVKRIN---SEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSL 605 (1023)
Q Consensus 530 ~~~~il~~~~F~s~~k~msviv~~~~---~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~gl 605 (1023)
+.++.+.+.||||.+|++-.+.+..+ .++.+.+|||||.++++|+.+. -+|+..|+++.. +.+.+...++...|.
T Consensus 468 ~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~-i~g~e~pld~~~~~~f~~ay~~lg~~Ge 546 (1019)
T KOG0203|consen 468 ERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTIL-INGEEKPLDEKLKEAFQEAYLELGGLGE 546 (1019)
T ss_pred HhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhcccee-ecCCCCCcCHHHHHHHHHHHHHhhhcch
Confidence 89999999999999999988877654 4678889999999999999875 477888999888 899999999999999
Q ss_pred hhhhhhhcccccc------------CCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH
Q 042091 606 RCVAIAYRFILDK------------WTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE 673 (1023)
Q Consensus 606 r~l~~ayk~~~~~------------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~ 673 (1023)
||++|+++.+.++ .+.+-+++.|+|++.+-||||..+++|+..|+.|||+|+|+|||++.||+++|++
T Consensus 547 rVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~ 626 (1019)
T KOG0203|consen 547 RVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKS 626 (1019)
T ss_pred HHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhh
Confidence 9999999998532 2345678999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCC-------------------CCCCeeeechhhhccCHHHHHHHHhhce--EeccCCHhhHHHHHHHHHhCCC
Q 042091 674 CGILGSDAE-------------------ANDPNIIEGKVFRALSDKEREKVAQEIT--VMGRSSPNDKLLLVQALRKGGD 732 (1023)
Q Consensus 674 ~gi~~~~~~-------------------~~~~~vi~g~~~~~l~~~~~~~~~~~~~--v~ar~~P~~K~~iV~~lq~~g~ 732 (1023)
.||.....+ ...+.|++|.++..++.+++++++.+.. ||||.||+||+.||+..|++|.
T Consensus 627 vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~Ga 706 (1019)
T KOG0203|consen 627 VGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGA 706 (1019)
T ss_pred eeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCc
Confidence 998765442 2357899999999999999999998764 9999999999999999999999
Q ss_pred EEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 042091 733 VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLIN 812 (1023)
Q Consensus 733 ~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~ 812 (1023)
+|+++|||+||+||||.||||||||+.|+|++|++||+||+||||++|+..+++||.+|+|+||.|.|.++.|+..+.+.
T Consensus 707 iVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~Pf 786 (1019)
T KOG0203|consen 707 IVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF 786 (1019)
T ss_pred EEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCC-CCCCCcchHHH-HHHHHHHHHHHHHHHHHHH
Q 042091 813 VVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVG-RKEPLITNIMW-RNLIVQALYQVTVLLVLNF 890 (1023)
Q Consensus 813 ~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ 890 (1023)
+++.+++.|.|+.++++|.+++.+|+.||++||+|+|+.++|+|+||+ +.+.++|..+. ...+..+.+|.+..|+-+|
T Consensus 787 L~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYF 866 (1019)
T KOG0203|consen 787 LLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYF 866 (1019)
T ss_pred HHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 67888886553 3445567777766665554
Q ss_pred hhhcccccc-----c--------------c---------ccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCc
Q 042091 891 KGTSILHLE-----G--------------E---------RRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVT 942 (1023)
Q Consensus 891 ~~~~~~~~~-----~--------------~---------~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~ 942 (1023)
..+..-++. + + .+..-..+..|..|.++|++|+++.+.|.++ +.++|...+
T Consensus 867 vima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTR-RnSlfqqGm 945 (1019)
T KOG0203|consen 867 VIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTR-RNSIFQQGM 945 (1019)
T ss_pred HHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcc-hhHHHHhhh
Confidence 322111110 0 0 0111234567888999999999999988875 477888779
Q ss_pred chHHHHHHHHHHHHH--HHHHHHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccC
Q 042091 943 KNYLFMGIIGITCVL--QIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPV 1001 (1023)
Q Consensus 943 ~n~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 1001 (1023)
+||+++.+++...++ ++.++|.....+++.|+.|.+|+..+..+++.|+.+|++|++.|
T Consensus 946 rN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR 1006 (1019)
T KOG0203|consen 946 RNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIR 1006 (1019)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhh
Confidence 999998887765544 34456888899999999999999999999999999999999877
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-118 Score=1104.66 Aligned_cols=747 Identities=24% Similarity=0.354 Sum_probs=623.2
Q ss_pred CCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHH
Q 042091 108 GISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVI 187 (1023)
Q Consensus 108 GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~ 187 (1023)
|||++ |+++|+++||+|+++. +.+++|+.++++|.++++++|+++++++++++ .|.+++.+++++++..
T Consensus 1 GLs~~--ea~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSA--EAKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHH--HHHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 78887 8999999999999996 45678899999999999999999999999887 6899988888888888
Q ss_pred HHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCc
Q 042091 188 VVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESK 267 (1023)
Q Consensus 188 ~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~ 267 (1023)
.++.++++++++..++|.+..+ .+++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~~~-~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQSLA-PKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhhCC-CeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 9999999999999999987765 689999999999999999999999999999999999999999878999999999999
Q ss_pred eeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042091 268 IVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLV 347 (1023)
Q Consensus 268 pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~ 347 (1023)
|+.|.+++. +|+||.|.+|+++++|++||.+|++|++.+++.+++.+++|+|+.+++++.++.++.+++++++++++..
T Consensus 149 PV~K~~~~~-v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~ 227 (755)
T TIGR01647 149 PVTKKTGDI-AYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF 227 (755)
T ss_pred ceEeccCCe-eeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998864 9999999999999999999999999999999998888889999999999999988877777666654432
Q ss_pred HHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCccccc
Q 042091 348 RFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRR 427 (1023)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~ 427 (1023)
. .+. ++...+..+ +++++++|||+||++++++++.++++|+|+|+++|+
T Consensus 228 ~--~~~----------------------~~~~~~~~~-------i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~ 276 (755)
T TIGR01647 228 G--RGE----------------------SFREGLQFA-------LVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTR 276 (755)
T ss_pred H--cCC----------------------CHHHHHHHH-------HHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcc
Confidence 1 110 145667777 999999999999999999999999999999999999
Q ss_pred chhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecC
Q 042091 428 LSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSG 507 (1023)
Q Consensus 428 ~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g 507 (1023)
++++|+||++|+||||||||||+|+|+|.+++..+..+ +++ +++..+..++. +.++
T Consensus 277 l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~---------~~~--~~l~~a~~~~~-------------~~~~ 332 (755)
T TIGR01647 277 LTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF---------DKD--DVLLYAALASR-------------EEDQ 332 (755)
T ss_pred cHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCC---------CHH--HHHHHHHHhCC-------------CCCC
Confidence 99999999999999999999999999999998643211 111 23333333321 1257
Q ss_pred ChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecC-CeEEEEEeCchHHHHHhhccccccCCccccC
Q 042091 508 SPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRIN-SEVHVHWKGAAEMILASCTKYLDTDGQLQSI 586 (1023)
Q Consensus 508 ~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l 586 (1023)
||+|+|+++++.+.+ ..+..+++++.+||++.+|+|+++++.++ ++.+.++||+||.|++.|+..
T Consensus 333 ~pi~~Ai~~~~~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~---------- 398 (755)
T TIGR01647 333 DAIDTAVLGSAKDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK---------- 398 (755)
T ss_pred ChHHHHHHHHHHHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc----------
Confidence 999999999887543 22345778899999999999999987653 667788999999999999742
Q ss_pred CchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHH
Q 042091 587 DGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQT 666 (1023)
Q Consensus 587 ~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t 666 (1023)
.+..+++++.+++++.+|+|++++|||+ .|++++|+|+++++||+|||++++|++|+++||+++|+|||++.|
T Consensus 399 ~~~~~~~~~~~~~~~~~G~rvl~vA~~~-------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~t 471 (755)
T TIGR01647 399 KEIEEKVEEKVDELASRGYRALGVARTD-------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAI 471 (755)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEEEEc-------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 1112677888899999999999999973 357899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHH
Q 042091 667 AKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPA 746 (1023)
Q Consensus 667 a~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~a 746 (1023)
|.++|+++||..... ....+.+|++.+.++++++++.++++.+|||++|+||.++|+.+|++|++|+|+|||+||+||
T Consensus 472 A~~IA~~lGI~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapA 549 (755)
T TIGR01647 472 AKETARRLGLGTNIY--TADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPA 549 (755)
T ss_pred HHHHHHHcCCCCCCc--CHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHH
Confidence 999999999975211 112344566667889999999999999999999999999999999999999999999999999
Q ss_pred hhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhH
Q 042091 747 LHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNA 826 (1023)
Q Consensus 747 L~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~ 826 (1023)
|++|||||||| +|+|+||++||+++++|+|+++++++++||++|+||+|++.|+++.|+..++..+++.++.+ .||+|
T Consensus 550 L~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~ 627 (755)
T TIGR01647 550 LKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPP 627 (755)
T ss_pred HHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhH
Confidence 99999999999 99999999999999999999999999999999999999999999999998887777666544 45999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcc-cccccccccc
Q 042091 827 VQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSI-LHLEGERRQH 905 (1023)
Q Consensus 827 ~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~ 905 (1023)
+|++|+|+++|. +++++++|++++. ++| +...++ .++..++..|++.++..+.++++.... +.........
T Consensus 628 ~~il~~~l~~d~-~~~~l~~~~~~~~---~~p---~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (755)
T TIGR01647 628 IMVVIIAILNDG-TIMTIAYDNVKPS---KLP---QRWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQL 699 (755)
T ss_pred HHHHHHHHHHhH-hHhhccCCCCCCC---CCC---CccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccc
Confidence 999999999996 6999999998742 333 333343 566667777877776555544433210 0000000011
Q ss_pred ccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHHHH
Q 042091 906 ASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQ 958 (1023)
Q Consensus 906 ~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 958 (1023)
.....+|+.|..+++.|.++.+++|+.+ ..|+.. .+++++.++++.+++.
T Consensus 700 ~~~~~~t~~f~~~~~~~~~~~~~~r~~~--~~~~~~-p~~~l~~~~~~~~~~~ 749 (755)
T TIGR01647 700 LHGNLQSLIYLQVSISGQATIFVTRTHG--FFWSER-PGKLLFIAFVIAQIIA 749 (755)
T ss_pred cHhhhHHHHHHHHHHHHHHHHheeccCC--CCcccC-CcHHHHHHHHHHHHHH
Confidence 2346789999999999999999999864 233333 4555544444444443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-119 Score=1142.31 Aligned_cols=836 Identities=21% Similarity=0.258 Sum_probs=661.6
Q ss_pred hhhccccccccccchh-hHHHHHHHHhhhhhhhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHH
Q 042091 59 VLNASRRFRYTLDLKK-EEEKEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFL 137 (1023)
Q Consensus 59 ~l~~~~~~~y~~~~~~-~~~~~~~~~~~~~~~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~ 137 (1023)
+.++..|+-|+++.++ +.+.+....... ........ ....||+.+ |+.+|++.||.|+++.+ .+++|
T Consensus 98 f~~~~~~y~~~~~~~~~f~~~~~~~~~~~-------~~~~~~~~--~~~~GLs~~--e~~~r~~~yG~N~i~~~-~~s~~ 165 (1054)
T TIGR01657 98 FDFRKQRFSYHEKELKIFSPLPYLFKEKS-------FGVYSTCA--GHSNGLTTG--DIAQRKAKYGKNEIEIP-VPSFL 165 (1054)
T ss_pred EEEEEEEEEEECCCCceEEeccccccccc-------chhhhhhh--hhccCCCHH--HHHHHHHhcCCCeeecC-CCCHH
Confidence 8888899999886654 544332211000 01111111 224699987 89999999999999976 58999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEE
Q 042091 138 NFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMR 217 (1023)
Q Consensus 138 ~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R 217 (1023)
+++++++.+|+++++++++++++.. +.|++++.+++++++...++.++++++.++++++... +..++|+|
T Consensus 166 ~ll~~~~~~p~~i~~i~~~~l~~~~--------~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~~--~~~v~V~R 235 (1054)
T TIGR01657 166 ELLKEEVLHPFYVFQVFSVILWLLD--------EYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHK--PQSVIVIR 235 (1054)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CeeEEEEE
Confidence 9999999999999999987776643 2688998888888888888888888888887776543 36899999
Q ss_pred CCEEEEEEeccceeccEEEec--CCCccCccEEEEeeCCeEEeeccccCCCceeccCCC-----------------CCee
Q 042091 218 GGKAVKISIFDVVVGEIVPLR--IGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHK-----------------TPFL 278 (1023)
Q Consensus 218 ~g~~~~I~~~dLv~GDIV~l~--~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~-----------------~~~l 278 (1023)
||++++|+++||||||||.|+ +||+|||||+|++|+ |.||||+|||||.|+.|.+. .+++
T Consensus 236 dg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~l 314 (1054)
T TIGR01657 236 NGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVL 314 (1054)
T ss_pred CCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccceecccCCccccccccccccccccceEE
Confidence 999999999999999999999 999999999999996 79999999999999999752 3479
Q ss_pred eccceEee-------cceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042091 279 MSGCKVAD-------GVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFT 351 (1023)
Q Consensus 279 ~aGt~v~~-------G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~ 351 (1023)
|+||.|.+ |.+.++|++||.+|..|++++++...+..++++++.+.++...+..++++.+++ .+..+..
T Consensus 315 f~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~----~~~~~~~ 390 (1054)
T TIGR01657 315 FGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIY----TIIELIK 390 (1054)
T ss_pred EcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 99999985 789999999999999999999998888888999988877766554443332222 1111111
Q ss_pred ccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhh
Q 042091 352 GHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSAC 431 (1023)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~ 431 (1023)
.. . .+...+..+ +++++++|||+||++++++++++++||+|+|++||+++++
T Consensus 391 ~~--~-------------------~~~~~~l~~-------l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~i 442 (1054)
T TIGR01657 391 DG--R-------------------PLGKIILRS-------LDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRI 442 (1054)
T ss_pred cC--C-------------------cHHHHHHHH-------HHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccc
Confidence 00 0 145667777 9999999999999999999999999999999999999999
Q ss_pred hhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHH
Q 042091 432 ETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTE 511 (1023)
Q Consensus 432 E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e 511 (1023)
|++|++|++|||||||||+|+|+|.+++..+...................+..+++.||+... . ++ +..|||+|
T Consensus 443 e~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~--~-~~---~~~Gdp~E 516 (1054)
T TIGR01657 443 NFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTK--L-EG---KLVGDPLD 516 (1054)
T ss_pred eecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEE--E-CC---EEecCHHH
Confidence 999999999999999999999999999875431110000000000112234456677776532 1 11 57899999
Q ss_pred HHHHHHHHHc-CC----Chhcc----------cccccEEEEecCCCCCceEEEEEeecC-CeEEEEEeCchHHHHHhhcc
Q 042091 512 KAILSWAVKL-GM----KFDRV----------RSETTVLHVFPFNSEKKRGGVAVKRIN-SEVHVHWKGAAEMILASCTK 575 (1023)
Q Consensus 512 ~All~~a~~~-g~----~~~~~----------~~~~~il~~~~F~s~~k~msviv~~~~-~~~~~~~KGa~e~il~~c~~ 575 (1023)
.|+++++... .. ..... ..++++++++||+|++|||||+++.++ +++++++|||||.|+++|+.
T Consensus 517 ~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~ 596 (1054)
T TIGR01657 517 KKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP 596 (1054)
T ss_pred HHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC
Confidence 9999986311 00 00000 145789999999999999999998754 56789999999999999984
Q ss_pred ccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhcccccc---------CCCCCCCcEEEeeeeccCCCcccHHHHH
Q 042091 576 YLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDK---------WTLPEEELILLAIVGIKDPCRPGVKDAV 646 (1023)
Q Consensus 576 ~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~---------~~~~e~~l~~lG~i~~~D~lr~~~~~~I 646 (1023)
. +..+++++.+++|+++|+||+|+|||++++. ++..|+||+|+|+++|+||+||+++++|
T Consensus 597 ~-----------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I 665 (1054)
T TIGR01657 597 E-----------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVI 665 (1054)
T ss_pred c-----------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHH
Confidence 1 0115688899999999999999999998531 2446899999999999999999999999
Q ss_pred HHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC--------------------------------------------
Q 042091 647 KLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE-------------------------------------------- 682 (1023)
Q Consensus 647 ~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~-------------------------------------------- 682 (1023)
+.|+++||+++|+||||+.||.+||++|||.++...
T Consensus 666 ~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (1054)
T TIGR01657 666 KELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVE 745 (1054)
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchh
Confidence 999999999999999999999999999999754310
Q ss_pred ----CCCCeeeechhhhc---cCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 042091 683 ----ANDPNIIEGKVFRA---LSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 683 ----~~~~~vi~g~~~~~---l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
.....+++|++++. +.++++.+++.++.||||++|+||.++|+.||+.|++|+|||||+||+||||+||||||
T Consensus 746 ~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIa 825 (1054)
T TIGR01657 746 DLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGIS 825 (1054)
T ss_pred hhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCccee
Confidence 01137899999876 46678999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHH
Q 042091 756 MGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLI 835 (1023)
Q Consensus 756 mg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli 835 (1023)
|| .+ | |..+||+++.+++|++++++|+|||+++.|+++.++|.+.+++...+..++ ++..+.||+++|++|+|++
T Consensus 826 m~-~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li 900 (1054)
T TIGR01657 826 LS-EA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLL 900 (1054)
T ss_pred ec-cc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHH
Confidence 98 33 4 448999999999999999999999999999999999999999987655433 3334589999999999999
Q ss_pred HHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhccccc---cc--cccccccccc
Q 042091 836 MDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHL---EG--ERRQHASDVK 910 (1023)
Q Consensus 836 ~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~--~~~~~~~~~~ 910 (1023)
++++++++++.++|.+++|++||. ++++++.++..++.|+++++++.++.++........ .. .+........
T Consensus 901 ~~~~~~l~l~~~~p~~~l~~~~P~---~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 977 (1054)
T TIGR01657 901 LIFPVALLMSRNKPLKKLSKERPP---SNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLL 977 (1054)
T ss_pred HHHHHHHHHHcCCchhhcCCCCCC---ccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHH
Confidence 999999999999999999999994 689999999999999999988777766554321110 00 0011223455
Q ss_pred hhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHHHHHH----HHHHHHHcccCCCCCH
Q 042091 911 NTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQII----IIEFLGKFTKTVKLDW 976 (1023)
Q Consensus 911 ~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~ 976 (1023)
+|++|.. +.+|.+..+.+++. ..++.+++++|++|+..+++++++++. ++++++.+|+++|++.
T Consensus 978 ~T~~f~~-~~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1045 (1054)
T TIGR01657 978 NTVLFFV-SSFQYLITAIVNSK-GPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ 1045 (1054)
T ss_pred HHHHHHH-HHHHHHHheEEEcC-CcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH
Confidence 7999954 44455555666664 456667899999988877776666542 2578999999999985
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-107 Score=1043.56 Aligned_cols=840 Identities=23% Similarity=0.296 Sum_probs=637.7
Q ss_pred cCCCcCCCCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhH-HHHHHHHHHHHHHHHHHHHH
Q 042091 123 FGSNTYPLKKGRSFL----NFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGA-SIAFAVFLVIVVTAISDYRQ 197 (1023)
Q Consensus 123 ~G~N~~~~~~~~~~~----~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~-~i~~~lll~~~v~~~~~~~~ 197 (1023)
|.+|.+...| +++| +.+++||+++.+++|++++++++++.+++.+ ++..+ .+++++++..+..+++|+++
T Consensus 1 ~~~N~i~tsk-Y~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~----~~t~~~pL~~v~~~~~~~~~~ed~~r 75 (1057)
T TIGR01652 1 FCSNKISTTK-YTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY----RGTSIVPLAFVLIVTAIKEAIEDIRR 75 (1057)
T ss_pred CCCCcccCcc-CcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC----ccHhHHhHHHHHHHHHHHHHHHHHHH
Confidence 5679998766 5554 6789999999999999999999998876432 22221 22222233345566677777
Q ss_pred HHHHHHHhccccCceEEEEEC-CEEEEEEeccceeccEEEecCCCccCccEEEEeeCC----eEEeeccccCCCceeccC
Q 042091 198 SLQFQNLNKEKRNIQLEAMRG-GKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHS----LAIDESSMTGESKIVRKD 272 (1023)
Q Consensus 198 ~~~~~~l~~~~~~~~~~V~R~-g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~----l~VDES~LTGES~pv~K~ 272 (1023)
+++.++. ++..++|+|+ |++++++++||+|||+|.|++||+|||||++++++. |.||||+|||||.|+.|.
T Consensus 76 ~~~d~~~----n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~ 151 (1057)
T TIGR01652 76 RRRDKEV----NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQ 151 (1057)
T ss_pred HHhHHHH----hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEee
Confidence 6665544 3468999997 899999999999999999999999999999999654 899999999999999886
Q ss_pred CC-----------------------------------------------CCeeeccceEee-cceeEEEEEEecccHHHH
Q 042091 273 HK-----------------------------------------------TPFLMSGCKVAD-GVGTMMVTGVGINTEWGL 304 (1023)
Q Consensus 273 ~~-----------------------------------------------~~~l~aGt~v~~-G~~~~~V~~tG~~T~~g~ 304 (1023)
+. +|++++||.+.+ |.+.|+|++||.+|++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~ 231 (1057)
T TIGR01652 152 ALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR 231 (1057)
T ss_pred cchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh
Confidence 31 257899999999 899999999999996654
Q ss_pred HHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccccccc-ccccchHHHHHHHHHH
Q 042091 305 LMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGR-TSVSDAVDGVIKIVTI 383 (1023)
Q Consensus 305 i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 383 (1023)
+....+.+.++++++++++..++..+.++++++++++...+ ... .....|+... ..........+..|..
T Consensus 232 ---n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~--~~~----~~~~~~yl~~~~~~~~~~~~~~~~~~~ 302 (1057)
T TIGR01652 232 ---NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIW--NDA----HGKDLWYIRLDVSERNAAANGFFSFLT 302 (1057)
T ss_pred ---cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhe--ecc----cCCCccceecCcccccchhHHHHHHHH
Confidence 45556778899999999999888877777776665543222 111 0111232210 0011111122333444
Q ss_pred hhcchhhhhhhhhhhccCchhHHHHHHHHHHH------HHHHhC----CcccccchhhhhccCceeeeeCCccccccCce
Q 042091 384 ATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSM------RKMMAD----KALVRRLSACETMGSATTICSDKTGTLTLNEM 453 (1023)
Q Consensus 384 a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~------~~l~~~----~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m 453 (1023)
+ +.++..++|++|+..++++.+.++ ++|.++ +++||+++++|+||++++||+|||||||+|+|
T Consensus 303 ~-------~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M 375 (1057)
T TIGR01652 303 F-------LILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIM 375 (1057)
T ss_pred H-------HHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeE
Confidence 4 889999999999999999999998 788875 49999999999999999999999999999999
Q ss_pred EEEEEEeCCcccCCCCC---------CC-----------c-------------------ccHHHHHHHHHHHHccCCCcc
Q 042091 454 TVVEAFIGRKKINPPDD---------SS-----------Q-------------------MHSIVIYLLSEGIAQNTTGNV 494 (1023)
Q Consensus 454 ~v~~~~~~~~~~~~~~~---------~~-----------~-------------------~~~~~~~ll~~~i~~~~~~~~ 494 (1023)
++++++++|..|..... .. . ...+....+..+++.||+...
T Consensus 376 ~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~ 455 (1057)
T TIGR01652 376 EFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVP 455 (1057)
T ss_pred EEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccc
Confidence 99999998776542110 00 0 000111223345666766543
Q ss_pred cccCCC--CceeecCChHHHHHHHHHHHcCCChhcc--------------cccccEEEEecCCCCCceEEEEEeecCCeE
Q 042091 495 FVPKDG--EAVEVSGSPTEKAILSWAVKLGMKFDRV--------------RSETTVLHVFPFNSEKKRGGVAVKRINSEV 558 (1023)
Q Consensus 495 ~~~~~~--~~~~~~g~p~e~All~~a~~~g~~~~~~--------------~~~~~il~~~~F~s~~k~msviv~~~~~~~ 558 (1023)
...+++ ...+.++||+|.||+++|...|+.+... ..++++++++||+|+||||||+++.+++++
T Consensus 456 ~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~ 535 (1057)
T TIGR01652 456 EFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRI 535 (1057)
T ss_pred cccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeE
Confidence 221111 1335679999999999999998876432 235889999999999999999999888889
Q ss_pred EEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccccC------------------
Q 042091 559 HVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKW------------------ 619 (1023)
Q Consensus 559 ~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~------------------ 619 (1023)
++++|||||.|+++|+.. ++.. +++++.+++|+.+|+||+++|||.+++++
T Consensus 536 ~l~~KGA~e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r 605 (1057)
T TIGR01652 536 KLLCKGADTVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDR 605 (1057)
T ss_pred EEEEeCcHHHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhH
Confidence 999999999999999741 1222 67889999999999999999999985321
Q ss_pred --------CCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC---------
Q 042091 620 --------TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE--------- 682 (1023)
Q Consensus 620 --------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~--------- 682 (1023)
+..|+|++|+|+++++||+|+|++++|+.|++|||++||+|||+++||.+||++|||.+.+..
T Consensus 606 ~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~ 685 (1057)
T TIGR01652 606 EEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESL 685 (1057)
T ss_pred HHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCch
Confidence 235899999999999999999999999999999999999999999999999999999875431
Q ss_pred ---------------------------CCCCeeeechhhhccCHHH----HHHHHhhce--EeccCCHhhHHHHHHHHHh
Q 042091 683 ---------------------------ANDPNIIEGKVFRALSDKE----REKVAQEIT--VMGRSSPNDKLLLVQALRK 729 (1023)
Q Consensus 683 ---------------------------~~~~~vi~g~~~~~l~~~~----~~~~~~~~~--v~ar~~P~~K~~iV~~lq~ 729 (1023)
....++++|++++.+.+++ +.+++.++. ||||++|+||.++|+.+|+
T Consensus 686 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~ 765 (1057)
T TIGR01652 686 DATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKK 765 (1057)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHh
Confidence 1123689999998655443 445555554 9999999999999999999
Q ss_pred C-CCEEEEEcCCccCHHHhhhCCccEEecCCCCH--HHHhccCccccCCChhHHHHHH-HHHHHHHHhhHHHHHHHHHHH
Q 042091 730 G-GDVVAVTGDGTNDAPALHEADIGLAMGIQGTE--VAKENSDIIILDDNFASVVKVV-RWGRSVFANIQKFIQFQLTVN 805 (1023)
Q Consensus 730 ~-g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~--~ak~~adiil~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~n 805 (1023)
. |++|+|+|||+||+|||++|||||++ .|++ .|+++||+++. +|..+.+++ .+||++|+|+++++.|.+++|
T Consensus 766 ~~~~~vl~iGDG~ND~~mlk~AdVGIgi--~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn 841 (1057)
T TIGR01652 766 STGKTTLAIGDGANDVSMIQEADVGVGI--SGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKN 841 (1057)
T ss_pred cCCCeEEEEeCCCccHHHHhhcCeeeEe--cChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 8 99999999999999999999999965 5666 59999999998 599999997 889999999999999999999
Q ss_pred HHHHHHHHHHHHhcC---CCchhHHHHHHHHHHHHHHHHHHhcc--CCCCccccccCCC----CCCCCCcchHHHHHHHH
Q 042091 806 VAALLINVVAAISSG---DVPLNAVQLLWVNLIMDTLGALALAT--EPPTDHLMHRLPV----GRKEPLITNIMWRNLIV 876 (1023)
Q Consensus 806 v~~i~~~~~~~~~~~---~~pl~~~qll~~nli~d~l~~lal~~--e~~~~~~m~~~P~----~~~~~~~~~~~~~~~~~ 876 (1023)
++.+++.+++.++++ .+++++++++|+|++++.+|++++|. +++++++|.++|+ +++.++++...+..|++
T Consensus 842 ~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~ 921 (1057)
T TIGR01652 842 LIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWML 921 (1057)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHH
Confidence 999999999887654 46899999999999999999999974 6778899999997 66788888887778889
Q ss_pred HHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHH
Q 042091 877 QALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCV 956 (1023)
Q Consensus 877 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~ 956 (1023)
.|++|+++++++.+..........++.........+++|+++++...+..+..-+ .| +|+.+.++.++++
T Consensus 922 ~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~w-t~~~~~~~~~S~~ 991 (1057)
T TIGR01652 922 DGIYQSLVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEIN---------RW-NWISLITIWGSIL 991 (1057)
T ss_pred HHHHHHHHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHh---------Hh-HHHHHHHHHHHHH
Confidence 9999999887765543322111111111234556777888887777666543221 11 1222222223333
Q ss_pred HHHHHHHHHHHcc---------cCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCchhhhc
Q 042091 957 LQIIIIEFLGKFT---------KTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFV 1011 (1023)
Q Consensus 957 ~~~~~v~~~~~~~---------~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~ 1011 (1023)
+.+++......++ ...--++.+|+..++...++++++.++|++++.+.|...+..
T Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i 1055 (1057)
T TIGR01652 992 VWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIV 1055 (1057)
T ss_pred HHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHh
Confidence 3222221111111 111136789999999999999999999999999999876653
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-101 Score=972.13 Aligned_cols=840 Identities=20% Similarity=0.248 Sum_probs=618.7
Q ss_pred hcCCCcCCCCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHH
Q 042091 122 SFGSNTYPLKKGRSFLNF----LWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQ 197 (1023)
Q Consensus 122 ~~G~N~~~~~~~~~~~~~----l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~ 197 (1023)
.|..|.+...| |++|.| +++||+++.++++++.+++++++.+++.+. +...+.+++++++..+.+++.||++
T Consensus 86 ~f~~N~i~TsK-Yt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~---~t~~~PL~~vl~v~~ike~~Ed~~r 161 (1178)
T PLN03190 86 EFAGNSIRTAK-YSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGR---GASILPLAFVLLVTAVKDAYEDWRR 161 (1178)
T ss_pred cCCCCeeeccc-cccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCc---chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 59999999776 777665 689999999999999999999998765331 1112222233333334455566666
Q ss_pred HHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCC----eEEeeccccCCCceeccCC
Q 042091 198 SLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHS----LAIDESSMTGESKIVRKDH 273 (1023)
Q Consensus 198 ~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~----l~VDES~LTGES~pv~K~~ 273 (1023)
+++.++. ++..++|+|+|++++++++||+|||+|.|++||+|||||++++++. ++||||+|||||.|+.|.+
T Consensus 162 ~k~d~~~----N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 162 HRSDRIE----NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred HHhHHhh----cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 5555444 4568999999999999999999999999999999999999998433 7999999999999998863
Q ss_pred C--------------------------------------------CCeeeccceEeec-ceeEEEEEEecccHHHHHHhh
Q 042091 274 K--------------------------------------------TPFLMSGCKVADG-VGTMMVTGVGINTEWGLLMAS 308 (1023)
Q Consensus 274 ~--------------------------------------------~~~l~aGt~v~~G-~~~~~V~~tG~~T~~g~i~~~ 308 (1023)
+ +|++++||.+.+. .+.|+|++||.+| |++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N 314 (1178)
T PLN03190 238 KQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLN 314 (1178)
T ss_pred cchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhc
Confidence 1 3467777877776 4999999999999 46666
Q ss_pred cccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccccccc-c----ccc----ch-HHHHH
Q 042091 309 ISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGR-T----SVS----DA-VDGVI 378 (1023)
Q Consensus 309 ~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~----~~-~~~~~ 378 (1023)
..++..+.+++++++|++..+++.+.+++|+++.++...|.... .+......|+... . ... .. ...+.
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~--~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRH--RDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFF 392 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccc--cccccccccccccccccccccccccchhhHHHHH
Confidence 66667789999999999998888877777776655543322111 1110011122110 0 000 00 11122
Q ss_pred HHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCC----------cccccchhhhhccCceeeeeCCcccc
Q 042091 379 KIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADK----------ALVRRLSACETMGSATTICSDKTGTL 448 (1023)
Q Consensus 379 ~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~----------ilvr~~~~~E~lg~v~~I~~DKTGTL 448 (1023)
. |... +.++...+|.+|+..+.++....+..|.++. +.+|+.+.+|+||+|++||+||||||
T Consensus 393 ~-f~~~-------lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTL 464 (1178)
T PLN03190 393 T-FLMS-------VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTL 464 (1178)
T ss_pred H-HHHH-------HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCcc
Confidence 2 2222 5666789999999999999977677776655 78999999999999999999999999
Q ss_pred ccCceEEEEEEeCCcccCCCCC--------------C------C--------------ccc-H--HHHHHHHHHHHccCC
Q 042091 449 TLNEMTVVEAFIGRKKINPPDD--------------S------S--------------QMH-S--IVIYLLSEGIAQNTT 491 (1023)
Q Consensus 449 T~n~m~v~~~~~~~~~~~~~~~--------------~------~--------------~~~-~--~~~~ll~~~i~~~~~ 491 (1023)
|+|+|++++++++|..|+.... . . ... + .....+..+++.||+
T Consensus 465 T~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalCht 544 (1178)
T PLN03190 465 TENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNT 544 (1178)
T ss_pred ccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCC
Confidence 9999999999998766642100 0 0 000 0 111223456777777
Q ss_pred CcccccCCC-C-----ceeecCChHHHHHHHHHHHcCCC------------hhcccccccEEEEecCCCCCceEEEEEee
Q 042091 492 GNVFVPKDG-E-----AVEVSGSPTEKAILSWAVKLGMK------------FDRVRSETTVLHVFPFNSEKKRGGVAVKR 553 (1023)
Q Consensus 492 ~~~~~~~~~-~-----~~~~~g~p~e~All~~a~~~g~~------------~~~~~~~~~il~~~~F~s~~k~msviv~~ 553 (1023)
......+++ + ..+.++||+|.||+++|.+.|+. ....+.++++++++||+|+||||||+++.
T Consensus 545 v~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~ 624 (1178)
T PLN03190 545 IVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGC 624 (1178)
T ss_pred ceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEc
Confidence 643211111 1 23566799999999999999973 33445578999999999999999999998
Q ss_pred cCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhcccccc----C----------
Q 042091 554 INSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDK----W---------- 619 (1023)
Q Consensus 554 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~----~---------- 619 (1023)
+++++.+++|||||.|+++|++..+. +..+++++++++|+++|+|||++|||.++++ |
T Consensus 625 ~~~~~~l~~KGA~e~il~~~~~~~~~--------~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~ 696 (1178)
T PLN03190 625 PDKTVKVFVKGADTSMFSVIDRSLNM--------NVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTA 696 (1178)
T ss_pred CCCcEEEEEecCcHHHHHhhcccccc--------hhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhh
Confidence 88889999999999999999754211 1126788999999999999999999998532 1
Q ss_pred ------------CCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC-----
Q 042091 620 ------------TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE----- 682 (1023)
Q Consensus 620 ------------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~----- 682 (1023)
+..|+||+++|+++++||+|++++++|+.|+++||++||+|||+.+||.+||++|||.+...+
T Consensus 697 ~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~ 776 (1178)
T PLN03190 697 LIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIIN 776 (1178)
T ss_pred hhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEec
Confidence 236899999999999999999999999999999999999999999999999999999865421
Q ss_pred ---------------------------------------CCCCeeeechhhhccCH----HHHHHHHhhce--EeccCCH
Q 042091 683 ---------------------------------------ANDPNIIEGKVFRALSD----KEREKVAQEIT--VMGRSSP 717 (1023)
Q Consensus 683 ---------------------------------------~~~~~vi~g~~~~~l~~----~~~~~~~~~~~--v~ar~~P 717 (1023)
.+..++++|+++..+.+ +++.++..++. ||||++|
T Consensus 777 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP 856 (1178)
T PLN03190 777 SNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAP 856 (1178)
T ss_pred CCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCH
Confidence 01247899999988765 45666666665 7999999
Q ss_pred hhHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEEecCCCCH--HHHhccCccccCCChhHHHHHH-HHHHHHHHh
Q 042091 718 NDKLLLVQALRKG-GDVVAVTGDGTNDAPALHEADIGLAMGIQGTE--VAKENSDIIILDDNFASVVKVV-RWGRSVFAN 793 (1023)
Q Consensus 718 ~~K~~iV~~lq~~-g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~--~ak~~adiil~~~~~~~i~~~i-~~gR~~~~~ 793 (1023)
+||+++|+.+|++ +++|+|+|||+||+|||++||||| |+.|+| .|+.+||+.+. .|..+.+++ -+||+.|+|
T Consensus 857 ~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R 932 (1178)
T PLN03190 857 LQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMG--QFRFLVPLLLVHGHWNYQR 932 (1178)
T ss_pred HHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchh--hhHHHHHHHHHhCHHHHHH
Confidence 9999999999997 589999999999999999999999 557888 79999999999 677788886 579999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCC---CchhHHHHHHHHHHHHHHHHHHhc-c--CCCCccccccCCC---CCCCC
Q 042091 794 IQKFIQFQLTVNVAALLINVVAAISSGD---VPLNAVQLLWVNLIMDTLGALALA-T--EPPTDHLMHRLPV---GRKEP 864 (1023)
Q Consensus 794 i~~~i~~~l~~nv~~i~~~~~~~~~~~~---~pl~~~qll~~nli~d~l~~lal~-~--e~~~~~~m~~~P~---~~~~~ 864 (1023)
+.+.+.|.+++|++..++++++.+++++ +.++.+.+.++|++++.+|.+++| . +-|++.+++.|-. +++..
T Consensus 933 ~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~ 1012 (1178)
T PLN03190 933 MGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQE 1012 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCC
Confidence 9999999999999999999998887655 567899999999999999999987 2 3344444444332 45667
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcch
Q 042091 865 LITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKN 944 (1023)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n 944 (1023)
.++...++.|++.|+||+++++++.++.......+ .....++++++.++...+..+...+ .| +
T Consensus 1013 ~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~~~~-------~~~~~~~~~~~~v~~vnl~i~~~~~---------~w-t 1075 (1178)
T PLN03190 1013 AYNSKLFWLTMIDTLWQSAVVFFVPLFAYWASTID-------GSSIGDLWTLAVVILVNLHLAMDII---------RW-N 1075 (1178)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcC-------ceeEhHhhhhHHHHHHHHHHHHHHh---------hh-h
Confidence 88887777889999999998887765533211111 1223455555555544444321111 11 1
Q ss_pred HHHHHHHHHHHHHHHHHH------HH---HHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCchhhhcc
Q 042091 945 YLFMGIIGITCVLQIIII------EF---LGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFVR 1012 (1023)
Q Consensus 945 ~~~~~~~~~~~~~~~~~v------~~---~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~~ 1012 (1023)
|+-+.++.+++++.+++. +. .+.++.+ --++.+|+..+++.+++++++.++|++.+.+.|...+..+
T Consensus 1076 ~~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~ 1151 (1178)
T PLN03190 1076 WITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAR 1151 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 211111222222221111 11 1112211 1267889999999999999999999999999998766543
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-92 Score=839.92 Aligned_cols=548 Identities=24% Similarity=0.344 Sum_probs=447.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccC--CCcc-ccchhHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhccccCceEE
Q 042091 142 EAWQDLTLIILIVAAIASLALGIKTE--GVEE-GWYDGASIAFAVFLVIVVTAIS----DYRQSLQFQNLNKEKRNIQLE 214 (1023)
Q Consensus 142 ~~~~~~~~~~ll~~ails~~~~~~~~--~~~~-~~~~~~~i~~~lll~~~v~~~~----~~~~~~~~~~l~~~~~~~~~~ 214 (1023)
.+|++|..++++++++++++++.+.+ +... .+++++.+++.+++..+++.++ ++|.+++.++|.+..++.+++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 57788999999999999998886532 1111 2245566777777766666665 678888889998877643565
Q ss_pred -EEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCC---CCeeeccceEeeccee
Q 042091 215 -AMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHK---TPFLMSGCKVADGVGT 290 (1023)
Q Consensus 215 -V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~---~~~l~aGt~v~~G~~~ 290 (1023)
|.|||++++|++++|+|||+|.|++||+|||||++++|+. .||||+|||||.|+.|.++ ++ +|+||.|.+|+++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~ 185 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLE 185 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecceEE
Confidence 6799999999999999999999999999999999999975 9999999999999999988 77 9999999999999
Q ss_pred EEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccc
Q 042091 291 MMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSV 370 (1023)
Q Consensus 291 ~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (1023)
++|+++|.+|++|++.+++++++.++||+|..+..+...+.. .++++++++..+ ..+.
T Consensus 186 i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-----i~l~~~~~~~~~--~~~~--------------- 243 (673)
T PRK14010 186 VEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-----IFLVVILTMYPL--AKFL--------------- 243 (673)
T ss_pred EEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-----HHHHHHHHHHHH--Hhhc---------------
Confidence 999999999999999999999888999999776655433222 222222221111 0000
Q ss_pred cchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCcccccc
Q 042091 371 SDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTL 450 (1023)
Q Consensus 371 ~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~ 450 (1023)
++...+.++ +++++.+|||+||..++++++.++++|+|+|+++|+++++|+||++|++|||||||||+
T Consensus 244 -----~~~~~~~~~-------val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~ 311 (673)
T PRK14010 244 -----NFNLSIAML-------IALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITY 311 (673)
T ss_pred -----cHHHHHHHH-------HHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCC
Confidence 012234444 78888899999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccc
Q 042091 451 NEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRS 530 (1023)
Q Consensus 451 n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~ 530 (1023)
|++.+.++...+. .. ..+++..+..++. .+.||+++|+++++++.+.+....
T Consensus 312 Gn~~~~~~~~~~~----------~~--~~~ll~~a~~~~~--------------~s~~P~~~AIv~~a~~~~~~~~~~-- 363 (673)
T PRK14010 312 GNRMADAFIPVKS----------SS--FERLVKAAYESSI--------------ADDTPEGRSIVKLAYKQHIDLPQE-- 363 (673)
T ss_pred CCeEEEEEEeCCC----------cc--HHHHHHHHHHhcC--------------CCCChHHHHHHHHHHHcCCCchhh--
Confidence 8877776542110 01 1223333333321 135999999999998876543221
Q ss_pred cccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhh
Q 042091 531 ETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAI 610 (1023)
Q Consensus 531 ~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ 610 (1023)
..+.+||++++|+|++.++ + + .+.||+++.+++.|+. +|...+ ..+++..++++++|+|++++
T Consensus 364 ---~~~~~pF~~~~k~~gv~~~--g-~--~i~kGa~~~il~~~~~----~g~~~~-----~~~~~~~~~~a~~G~~~l~v 426 (673)
T PRK14010 364 ---VGEYIPFTAETRMSGVKFT--T-R--EVYKGAPNSMVKRVKE----AGGHIP-----VDLDALVKGVSKKGGTPLVV 426 (673)
T ss_pred ---hcceeccccccceeEEEEC--C-E--EEEECCHHHHHHHhhh----cCCCCc-----hHHHHHHHHHHhCCCeEEEE
Confidence 1235899999999998753 2 2 4569999999999985 222111 23566778899999999988
Q ss_pred hhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee
Q 042091 611 AYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE 690 (1023)
Q Consensus 611 ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~ 690 (1023)
+ .|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.
T Consensus 427 ~------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~------------- 481 (673)
T PRK14010 427 L------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD------------- 481 (673)
T ss_pred E------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-------------
Confidence 7 578999999999999999999999999999999999999999999999999997
Q ss_pred chhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCc
Q 042091 691 GKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI 770 (1023)
Q Consensus 691 g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adi 770 (1023)
.+|||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+||++||+
T Consensus 482 -------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADi 541 (673)
T PRK14010 482 -------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANL 541 (673)
T ss_pred -------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCE
Confidence 379999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 042091 771 IILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVA 815 (1023)
Q Consensus 771 il~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~ 815 (1023)
+++||||+.+++++++||++|.|+++++.|.++.|+..++..+..
T Consensus 542 VLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a 586 (673)
T PRK14010 542 IDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPA 586 (673)
T ss_pred EEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHH
Confidence 999999999999999999999999999999999999877665543
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-92 Score=816.04 Aligned_cols=774 Identities=22% Similarity=0.299 Sum_probs=596.5
Q ss_pred CCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHH
Q 042091 106 EKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFL 185 (1023)
Q Consensus 106 ~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll 185 (1023)
..||+.. ++.+|+..||.|.+..+ .++.+.++.++--+|+.++..++.+++..-. ++|++.+|++.-..
T Consensus 158 ~~gL~~~--~~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~--------Y~~YA~cI~iisv~ 226 (1140)
T KOG0208|consen 158 SNGLERQ--EIIDRRIIYGRNVISLP-IKSISQILVKEVLNPFYLFQAFSVALWLADS--------YYYYAFCIVIISVY 226 (1140)
T ss_pred cCCccHH--HHHhHHhhcCCceeeee-cccHHHHHHHhccchHHHHHhHHhhhhhccc--------chhhhhHHHHHHHH
Confidence 4699887 88999999999999976 5999999999999999999888766665443 56666666665555
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecC-CCccCccEEEEeeCCeEEeeccccC
Q 042091 186 VIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRI-GDQVPADGVLVTGHSLAIDESSMTG 264 (1023)
Q Consensus 186 ~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~-Gd~VPaDgill~g~~l~VDES~LTG 264 (1023)
.++.+.++..++++.++++.+.. ..|+|+|||.+++|.++|||||||+.+.+ |-..|||++|++|+ |.||||||||
T Consensus 227 Si~~sv~e~r~qs~rlr~mv~~~--~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmLTG 303 (1140)
T KOG0208|consen 227 SIVLSVYETRKQSIRLRSMVKFT--CPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC--ceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeecccccC
Confidence 66777777788888888887664 58999999999999999999999999998 99999999999997 6999999999
Q ss_pred CCceeccCCC------------------CCeeeccceEee------cceeEEEEEEecccHHHHHHhhcccCCCCCChhH
Q 042091 265 ESKIVRKDHK------------------TPFLMSGCKVAD------GVGTMMVTGVGINTEWGLLMASISEDNGEETPLQ 320 (1023)
Q Consensus 265 ES~pv~K~~~------------------~~~l~aGt~v~~------G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq 320 (1023)
||.|+.|.+- .+++|+||++++ |.+.+.|++||.+|..|++.+++..++. ++++
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP--~~fk 381 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKP--VNFK 381 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCC--cccH
Confidence 9999999762 368999999985 6699999999999999999999998653 3333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhcc
Q 042091 321 VRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVP 400 (1023)
Q Consensus 321 ~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP 400 (1023)
..-|.+..+.+. .++|++.|+..++.+.. +. . ..-.++..+ +-++.+.+|
T Consensus 382 fyrds~~fi~~l--~~ia~~gfiy~~i~l~~-~g-~-------------------~~~~iiirs-------LDliTi~VP 431 (1140)
T KOG0208|consen 382 FYRDSFKFILFL--VIIALIGFIYTAIVLNL-LG-V-------------------PLKTIIIRS-------LDLITIVVP 431 (1140)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHhHhHHH-cC-C-------------------CHHHHhhhh-------hcEEEEecC
Confidence 333332222222 22233333332222211 10 0 034455555 888999999
Q ss_pred CchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCC-------CC--
Q 042091 401 EGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPD-------DS-- 471 (1023)
Q Consensus 401 ~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~-------~~-- 471 (1023)
++||.+.++...++.+||.|+|+.+-+++.+...|++|++|||||||||++.+.+-.+..-...-+... +.
T Consensus 432 PALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~ 511 (1140)
T KOG0208|consen 432 PALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQ 511 (1140)
T ss_pred CCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhcc
Confidence 999999999999999999999999999999999999999999999999999999987775321100000 00
Q ss_pred --Ccc--cH--HHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHc--------------C------CCh
Q 042091 472 --SQM--HS--IVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKL--------------G------MKF 525 (1023)
Q Consensus 472 --~~~--~~--~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~--------------g------~~~ 525 (1023)
..+ +. .....+..+++.||+.... + ....|||.|.-+.+..... + ++.
T Consensus 512 ~~~~l~~~~~~~~~~~~~~a~atCHSL~~v-~-----g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p 585 (1140)
T KOG0208|consen 512 LFYKLSLRSSSLPMGNLVAAMATCHSLTLV-D-----GTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRP 585 (1140)
T ss_pred ceeeccccccCCchHHHHHHHhhhceeEEe-C-----CeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCC
Confidence 000 00 0112455677888854331 1 2567888888777643210 0 000
Q ss_pred -----hcccc----cccEEEEecCCCCCceEEEEEeecC-CeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHH
Q 042091 526 -----DRVRS----ETTVLHVFPFNSEKKRGGVAVKRIN-SEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKA 595 (1023)
Q Consensus 526 -----~~~~~----~~~il~~~~F~s~~k~msviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~ 595 (1023)
+...+ .+.+++.+||+|..+||||+++.++ ++..+|+|||||.|.+.|++- .++ +.+++
T Consensus 586 ~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--------tvP---~dy~e 654 (1140)
T KOG0208|consen 586 PENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--------TVP---ADYQE 654 (1140)
T ss_pred CcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc--------cCC---ccHHH
Confidence 00001 4679999999999999999999763 578999999999999999852 111 56889
Q ss_pred HHHHHHhccchhhhhhhcccccc---------CCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHH
Q 042091 596 AVDEMAARSLRCVAIAYRFILDK---------WTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQT 666 (1023)
Q Consensus 596 ~~~~~a~~glr~l~~ayk~~~~~---------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t 666 (1023)
.++.|+.+|+|++|+|+|++... ++..|.|++|+|++.|++++|++.+.+|++|++|.||++|+||||..|
T Consensus 655 vl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllT 734 (1140)
T KOG0208|consen 655 VLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLT 734 (1140)
T ss_pred HHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchhe
Confidence 99999999999999999999543 466899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC--------------------------------------------------CCCCeeeechhhhc
Q 042091 667 AKAIALECGILGSDAE--------------------------------------------------ANDPNIIEGKVFRA 696 (1023)
Q Consensus 667 a~~ia~~~gi~~~~~~--------------------------------------------------~~~~~vi~g~~~~~ 696 (1023)
|..+||+||+..+... .+..++++|+.++-
T Consensus 735 aisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~ 814 (1140)
T KOG0208|consen 735 AISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQV 814 (1140)
T ss_pred eeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHH
Confidence 9999999999876531 11346788888776
Q ss_pred c---CHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCcccc
Q 042091 697 L---SDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIIL 773 (1023)
Q Consensus 697 l---~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~ 773 (1023)
+ ..+.+++++.+..|||||+|.||.++|+.||+.|+.|+|+|||+||+.|||+||+||+++. ..|.-+|.+.-.
T Consensus 815 i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSe---aEASvAApFTSk 891 (1140)
T KOG0208|consen 815 ILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSE---AEASVAAPFTSK 891 (1140)
T ss_pred HHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhh---hhHhhcCccccC
Confidence 4 4678889999999999999999999999999999999999999999999999999999973 235667899888
Q ss_pred CCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 042091 774 DDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHL 853 (1023)
Q Consensus 774 ~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~ 853 (1023)
-.+.+++.++|+|||+.+-.--..++|...|.++..+. +..+++...-++..|.++++++..++.|++++..+|.+.+
T Consensus 892 ~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFis--v~~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L 969 (1140)
T KOG0208|consen 892 TPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFIS--VVFLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKL 969 (1140)
T ss_pred CCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHh--hheeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHh
Confidence 88999999999999999999999999988887764433 2234455678999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcccccc--c-cccccccccchhHHHHHHHHHHHHhhcccC
Q 042091 854 MHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLE--G-ERRQHASDVKNTMIFNAFVLSQIFNEFNAR 930 (1023)
Q Consensus 854 m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~-~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r 930 (1023)
-..||. ..+++.......++|.++..++-+.+++......... . ....+.....+|.+|..-.|..+++++...
T Consensus 970 ~~~rP~---~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S 1046 (1140)
T KOG0208|consen 970 FPKRPP---TNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALVLS 1046 (1140)
T ss_pred cCCCCC---ccccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhheeec
Confidence 877773 5577777777777777766666655554432211111 0 001233456678888888888888876544
Q ss_pred CCCccceeecCcchHHHHHHHH
Q 042091 931 KPDEINVFTGVTKNYLFMGIIG 952 (1023)
Q Consensus 931 ~~~~~~~~~~~~~n~~~~~~~~ 952 (1023)
. ..++.+++|+|+.|...+.
T Consensus 1047 ~--g~pfr~pl~~n~~f~~~i~ 1066 (1140)
T KOG0208|consen 1047 K--GSPFRRPLWKNVLFKVFIT 1066 (1140)
T ss_pred c--CCcccCchhcCceeeeehh
Confidence 3 2445567889988765443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-91 Score=828.90 Aligned_cols=555 Identities=25% Similarity=0.353 Sum_probs=453.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccC---C---CccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEE
Q 042091 141 WEAWQDLTLIILIVAAIASLALGIKTE---G---VEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLE 214 (1023)
Q Consensus 141 ~~~~~~~~~~~ll~~ails~~~~~~~~---~---~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~ 214 (1023)
..+|+++..+++++++++++++++... + ....|..++.+++.+++..++++++++|.++++++|.+..+...++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 368899999999999999998876421 1 1123444455555555666778889999999999999987645799
Q ss_pred EEECCE-EEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCCCC--eeeccceEeecceeE
Q 042091 215 AMRGGK-AVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTP--FLMSGCKVADGVGTM 291 (1023)
Q Consensus 215 V~R~g~-~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~~~--~l~aGt~v~~G~~~~ 291 (1023)
|+|||+ +++|+++||+|||+|.+++||+|||||++++|. ..||||+|||||.|+.|++++. .+|+||.|.+|.+++
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 899999999999999999999999999999997 5999999999999999998643 499999999999999
Q ss_pred EEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccccccccccc
Q 042091 292 MVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVS 371 (1023)
Q Consensus 292 ~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (1023)
+|+++|.+|++|++.+++++++.++||+|..++.+...+..+.+++++.++. +.++.+.
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~---~~~~~g~------------------ 245 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPP---FAAYSGG------------------ 245 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH---HHHHhCc------------------
Confidence 9999999999999999999998899999988887766655433322222111 1111110
Q ss_pred chHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccC
Q 042091 372 DAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLN 451 (1023)
Q Consensus 372 ~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n 451 (1023)
...+.++ +++++++|||+|+.+++.+...++++|+++|+++|+++++|+||++|+||||||||||+|
T Consensus 246 ------~~~l~~~-------iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g 312 (679)
T PRK01122 246 ------ALSITVL-------VALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLG 312 (679)
T ss_pred ------hHHHHHH-------HHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCC
Confidence 0134555 889999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHH-cCCChhcccc
Q 042091 452 EMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVK-LGMKFDRVRS 530 (1023)
Q Consensus 452 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~-~g~~~~~~~~ 530 (1023)
+|++++++..+. ..+ .+++..+ +.++. .+.||.++|+++++++ .+... .+.
T Consensus 313 ~~~v~~~~~~~~----------~~~--~~ll~~a-~~~s~-------------~s~hP~~~AIv~~a~~~~~~~~--~~~ 364 (679)
T PRK01122 313 NRQASEFLPVPG----------VTE--EELADAA-QLSSL-------------ADETPEGRSIVVLAKQRFNLRE--RDL 364 (679)
T ss_pred cEEEEEEEeCCC----------CCH--HHHHHHH-HHhcC-------------CCCCchHHHHHHHHHhhcCCCc--hhh
Confidence 999998874321 111 1222222 22221 1358999999999886 34322 111
Q ss_pred cccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhh
Q 042091 531 ETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAI 610 (1023)
Q Consensus 531 ~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ 610 (1023)
.++..+.+||++++|+|++.+. + ..++||++|.+++.|.. +|... .+++++.+++++++|+|++++
T Consensus 365 ~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~-----~~~~~~~~~~~a~~G~~~l~v 430 (679)
T PRK01122 365 QSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVES----NGGHF-----PAELDAAVDEVARKGGTPLVV 430 (679)
T ss_pred ccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHh----cCCcC-----hHHHHHHHHHHHhCCCcEEEE
Confidence 2456788999999998888542 3 46899999999999964 22211 156777888999999999999
Q ss_pred hhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee
Q 042091 611 AYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE 690 (1023)
Q Consensus 611 ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~ 690 (1023)
| .|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||+
T Consensus 431 a------------~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId------------- 485 (679)
T PRK01122 431 A------------EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD------------- 485 (679)
T ss_pred E------------ECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-------------
Confidence 9 578999999999999999999999999999999999999999999999999996
Q ss_pred chhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCc
Q 042091 691 GKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI 770 (1023)
Q Consensus 691 g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adi 770 (1023)
.++||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+||++||+
T Consensus 486 -------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADi 545 (679)
T PRK01122 486 -------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNM 545 (679)
T ss_pred -------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCE
Confidence 379999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH----HHHHHHHHHHh
Q 042091 771 IILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVA----ALLINVVAAIS 818 (1023)
Q Consensus 771 il~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~----~i~~~~~~~~~ 818 (1023)
+++||||+++++++++||++.-.--..-.|++. |-+ ++++.++...+
T Consensus 546 VLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~-n~~~~~~~i~p~~~~~~~ 596 (679)
T PRK01122 546 VDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA-NDVAKYFAIIPAMFAATY 596 (679)
T ss_pred EEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH-HHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999776666778776 444 44444444333
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-87 Score=793.26 Aligned_cols=546 Identities=25% Similarity=0.378 Sum_probs=450.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc--CC---Cccccchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCce
Q 042091 141 WEAWQDLTLIILIVAAIASLALGIKT--EG---VEEGWYDG---ASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQ 212 (1023)
Q Consensus 141 ~~~~~~~~~~~ll~~ails~~~~~~~--~~---~~~~~~~~---~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~ 212 (1023)
..||+++..+++++++++++++++.+ .+ ....||++ +.+++.+++..++++++++|.++++++|.+..++..
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 36889999999999999999987642 11 11257875 334444566668888999999999999998876556
Q ss_pred EEEEE-CCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCCCC--eeeccceEeecce
Q 042091 213 LEAMR-GGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTP--FLMSGCKVADGVG 289 (1023)
Q Consensus 213 ~~V~R-~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~~~--~l~aGt~v~~G~~ 289 (1023)
++|+| ||++++|+++||+|||+|.|++||+|||||++++|+ +.||||+|||||.|+.|++++. .+|+||.|.+|.+
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88885 999999999999999999999999999999999996 5999999999999999998864 3899999999999
Q ss_pred eEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccccccccc
Q 042091 290 TMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTS 369 (1023)
Q Consensus 290 ~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (1023)
+++|+++|.+|++|++++++++++.++||+|..++.+..++..+.+++. +.++.+..+.+
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~---~~~~~~~~~~~----------------- 245 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVT---ATLWPFAAYGG----------------- 245 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHH---HHHHHHHHhcC-----------------
Confidence 9999999999999999999999888899999888877655543322221 11111110000
Q ss_pred ccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccc
Q 042091 370 VSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLT 449 (1023)
Q Consensus 370 ~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT 449 (1023)
....+.++ +++++++|||+|+...+.....+++||+++|+++|+++++|+||++|++|||||||||
T Consensus 246 -------~~~~~~~l-------vallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT 311 (675)
T TIGR01497 246 -------NAISVTVL-------VALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTIT 311 (675)
T ss_pred -------hhHHHHHH-------HHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCccc
Confidence 01134445 8899999999888777777778999999999999999999999999999999999999
Q ss_pred cCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhccc
Q 042091 450 LNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVR 529 (1023)
Q Consensus 450 ~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~ 529 (1023)
+|+|++++++..+. .+. .+++.. .+.++. .+.||.++|+++++++.+.+....
T Consensus 312 ~g~~~v~~~~~~~~----------~~~--~~ll~~-aa~~~~-------------~s~hP~a~Aiv~~a~~~~~~~~~~- 364 (675)
T TIGR01497 312 LGNRLASEFIPAQG----------VDE--KTLADA-AQLASL-------------ADDTPEGKSIVILAKQLGIREDDV- 364 (675)
T ss_pred CCCeEEEEEEecCC----------CcH--HHHHHH-HHHhcC-------------CCCCcHHHHHHHHHHHcCCCcccc-
Confidence 99999998874211 011 122222 222211 136899999999998876543321
Q ss_pred ccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhh
Q 042091 530 SETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVA 609 (1023)
Q Consensus 530 ~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~ 609 (1023)
.++..+..||++++|++++.+. ++ ..++||++|.+++.|.. +|... .+++++.+++++++|+|+++
T Consensus 365 -~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~-----~~~~~~~~~~~a~~G~r~l~ 430 (675)
T TIGR01497 365 -QSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHI-----PTDLDQAVDQVARQGGTPLV 430 (675)
T ss_pred -ccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCC-----cHHHHHHHHHHHhCCCeEEE
Confidence 2345678999999888876543 33 46889999999998863 22211 14577788899999999999
Q ss_pred hhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeee
Q 042091 610 IAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNII 689 (1023)
Q Consensus 610 ~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi 689 (1023)
+| .+.+++|+++++||+|||++++|++|+++|++++|+|||+..+|.++|+++|+.
T Consensus 431 va------------~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~------------ 486 (675)
T TIGR01497 431 VC------------EDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD------------ 486 (675)
T ss_pred EE------------ECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------
Confidence 99 456899999999999999999999999999999999999999999999999996
Q ss_pred echhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccC
Q 042091 690 EGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSD 769 (1023)
Q Consensus 690 ~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~ad 769 (1023)
.+++|++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||| +|+++++++||
T Consensus 487 --------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaad 545 (675)
T TIGR01497 487 --------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAAN 545 (675)
T ss_pred --------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCC
Confidence 378999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 042091 770 IIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVA 807 (1023)
Q Consensus 770 iil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~ 807 (1023)
++++||||+++++++++||+++-+......|++..++.
T Consensus 546 ivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 546 MVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 99999999999999999999999999999999887665
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-88 Score=826.21 Aligned_cols=847 Identities=20% Similarity=0.263 Sum_probs=621.6
Q ss_pred HHhhcCCCcCCCCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHH
Q 042091 119 RRNSFGSNTYPLKKGRSFL----NFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISD 194 (1023)
Q Consensus 119 r~~~~G~N~~~~~~~~~~~----~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~ 194 (1023)
++..|-.|.+...| |+++ +.+++||++..|++|++.+++++++ +++. .++. .+++++++..+++++|
T Consensus 28 ~~~~~~~N~i~TtK-Yt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~----~~~~---~~~pl~~vl~~t~iKd 98 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTK-YTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPF----NPYT---TLVPLLFVLGITAIKD 98 (1151)
T ss_pred hhccccCCeeEEEe-ccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cccc----Cccc---eeeceeeeehHHHHHH
Confidence 44489999998765 5444 4579999999999999999999998 5432 2222 2334444444444444
Q ss_pred HHHHHHHHHHhccccCceEEEEECCE-EEEEEeccceeccEEEecCCCccCccEEEEeeCC----eEEeeccccCCCcee
Q 042091 195 YRQSLQFQNLNKEKRNIQLEAMRGGK-AVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHS----LAIDESSMTGESKIV 269 (1023)
Q Consensus 195 ~~~~~~~~~l~~~~~~~~~~V~R~g~-~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~----l~VDES~LTGES~pv 269 (1023)
..++...++.+++.++.++.|.|++. +++..|++|+|||+|.+..++.+|||.+|++++. |+|++++|+||+..+
T Consensus 99 ~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK 178 (1151)
T KOG0206|consen 99 AIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLK 178 (1151)
T ss_pred HHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccc
Confidence 44444444445555567899998644 8999999999999999999999999999999764 999999999999887
Q ss_pred ccCC----------------------------------------------CCCeeeccceEeecc-eeEEEEEEecccHH
Q 042091 270 RKDH----------------------------------------------KTPFLMSGCKVADGV-GTMMVTGVGINTEW 302 (1023)
Q Consensus 270 ~K~~----------------------------------------------~~~~l~aGt~v~~G~-~~~~V~~tG~~T~~ 302 (1023)
.|.. .+++++.|+++.+.. +.+.|+.+|.+|
T Consensus 179 ~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt-- 256 (1151)
T KOG0206|consen 179 VKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT-- 256 (1151)
T ss_pred eeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc--
Confidence 7642 124678888888876 899999999999
Q ss_pred HHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHH
Q 042091 303 GLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVT 382 (1023)
Q Consensus 303 g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (1023)
|++.+...+..+++++++.+|.....+..+.+.++++..+....+. ..+... .+ ..|+..... ........|.
T Consensus 257 -K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~-~~~~~~-~~-~~~~~~~~~---~~~~~~~~f~ 329 (1151)
T KOG0206|consen 257 -KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWT-RQDGRH-NG-EWWYLSPSE---AAYAGFVHFL 329 (1151)
T ss_pred -hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheee-eecccc-cC-chhhhcCch---HHHHHHHHHH
Confidence 5566666788899999999998877776666666655544432221 111111 11 233332221 1112222333
Q ss_pred HhhcchhhhhhhhhhhccCchhHHHHHHHHHHHH------HHH----hCCcccccchhhhhccCceeeeeCCccccccCc
Q 042091 383 IATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMR------KMM----ADKALVRRLSACETMGSATTICSDKTGTLTLNE 452 (1023)
Q Consensus 383 ~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~------~l~----~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~ 452 (1023)
.+ +.++...+|.+|...+.+.....+. .|. ...+.+|+.+..|+||++++|++|||||||+|.
T Consensus 330 t~-------~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~ 402 (1151)
T KOG0206|consen 330 TF-------IILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNS 402 (1151)
T ss_pred HH-------HhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccce
Confidence 34 7788889999999877776665552 233 346789999999999999999999999999999
Q ss_pred eEEEEEEeCCcccCCCCCC--------C----------c----------------ccHHHHHHHHHHHHccCCCcccccC
Q 042091 453 MTVVEAFIGRKKINPPDDS--------S----------Q----------------MHSIVIYLLSEGIAQNTTGNVFVPK 498 (1023)
Q Consensus 453 m~v~~~~~~~~~~~~~~~~--------~----------~----------------~~~~~~~ll~~~i~~~~~~~~~~~~ 498 (1023)
|++.+|.++|..|....+. . . ..+.....+..++++||+.....++
T Consensus 403 M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~ 482 (1151)
T KOG0206|consen 403 MEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDE 482 (1151)
T ss_pred eeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCC
Confidence 9999999998766532110 0 0 0112233456778889876553322
Q ss_pred CC-CceeecCChHHHHHHHHHHHcCCChhcc------------cccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCc
Q 042091 499 DG-EAVEVSGSPTEKAILSWAVKLGMKFDRV------------RSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGA 565 (1023)
Q Consensus 499 ~~-~~~~~~g~p~e~All~~a~~~g~~~~~~------------~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa 565 (1023)
++ ...+.+.+|+|.|+++.|+..|+.+..+ ...|+++++.+|+|.||||||+|+.+++++.+|||||
T Consensus 483 ~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGA 562 (1151)
T KOG0206|consen 483 DSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGA 562 (1151)
T ss_pred CccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCc
Confidence 22 4578899999999999999999876433 2378999999999999999999999999999999999
Q ss_pred hHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccccC-------------------------
Q 042091 566 AEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKW------------------------- 619 (1023)
Q Consensus 566 ~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~------------------------- 619 (1023)
+..|.+++.. + .+.. ++..+++++||.+|+||||+|||.+++++
T Consensus 563 DsvI~erL~~----~------~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ 632 (1151)
T KOG0206|consen 563 DSVIFERLSK----N------GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEV 632 (1151)
T ss_pred chhhHhhhhh----c------chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHH
Confidence 9999999975 1 1222 77888999999999999999999995321
Q ss_pred -CCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC----------------
Q 042091 620 -TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE---------------- 682 (1023)
Q Consensus 620 -~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~---------------- 682 (1023)
+.+|+||+++|.+++||++++||+++|+.|++||||+||+|||..+||.+||..|++...+..
T Consensus 633 ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~ 712 (1151)
T KOG0206|consen 633 AEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLD 712 (1151)
T ss_pred HHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchh
Confidence 457999999999999999999999999999999999999999999999999999999876431
Q ss_pred --------------------------CCCCeeeechhhhccCHH-HHH---HHHh--hceEeccCCHhhHHHHHHHHHhC
Q 042091 683 --------------------------ANDPNIIEGKVFRALSDK-ERE---KVAQ--EITVMGRSSPNDKLLLVQALRKG 730 (1023)
Q Consensus 683 --------------------------~~~~~vi~g~~~~~l~~~-~~~---~~~~--~~~v~ar~~P~~K~~iV~~lq~~ 730 (1023)
...+++++|+.+....++ +.. ++.. +..++||++|.||+.+|+..++.
T Consensus 713 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~ 792 (1151)
T KOG0206|consen 713 ATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKG 792 (1151)
T ss_pred hHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhc
Confidence 146789999998764433 322 2222 34799999999999999999854
Q ss_pred -CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 042091 731 -GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAAL 809 (1023)
Q Consensus 731 -g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i 809 (1023)
+.++++||||+||++|+++|||||++++.+...|..+||+.+....|.....++ +||+.|.|+.+++.|.+++|+...
T Consensus 793 ~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~ 871 (1151)
T KOG0206|consen 793 LKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFT 871 (1151)
T ss_pred CCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999776666667999999999965555544444 499999999999999999999999
Q ss_pred HHHHHHHHhcC---CCchhHHHHHHHHHHHHHHHHHHhc--cCCCCccccccCCC----CCCCCCcchHHHHHHHHHHHH
Q 042091 810 LINVVAAISSG---DVPLNAVQLLWVNLIMDTLGALALA--TEPPTDHLMHRLPV----GRKEPLITNIMWRNLIVQALY 880 (1023)
Q Consensus 810 ~~~~~~~~~~~---~~pl~~~qll~~nli~d~l~~lal~--~e~~~~~~m~~~P~----~~~~~~~~~~~~~~~~~~~~~ 880 (1023)
++.|++.++++ ...+.++++.++|++++.+|.+++| ....+.+.+.+.|. +++...+++..++.+++.++|
T Consensus 872 ~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~ 951 (1151)
T KOG0206|consen 872 FTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFY 951 (1151)
T ss_pred HHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHH
Confidence 99999988754 5688999999999999999999998 23444455555553 455667787777788999999
Q ss_pred HHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHHHHHH
Q 042091 881 QVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQII 960 (1023)
Q Consensus 881 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 960 (1023)
|+++++++.+...+......++.........+.+|+.+|+...+......+. | .|.|++++ ..++++.++
T Consensus 952 ~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~y-----w--T~i~~i~i---~gSi~~~f~ 1021 (1151)
T KOG0206|consen 952 QSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSY-----W--TWINHIVI---WGSILLWFV 1021 (1151)
T ss_pred hheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehh-----e--eHHHHHHH---HHHHHHHHH
Confidence 9999987766543211111111111234445556665554433332111110 0 12233322 222222222
Q ss_pred HHHHHHH-------------cccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCchhhhc
Q 042091 961 IIEFLGK-------------FTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFV 1011 (1023)
Q Consensus 961 ~v~~~~~-------------~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~ 1011 (1023)
+..+.+. ++...--++.+|+.+++..+++++++.++|.+.+...|...+.-
T Consensus 1022 f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i 1085 (1151)
T KOG0206|consen 1022 FLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDII 1085 (1151)
T ss_pred HHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHH
Confidence 2211111 11111136678999999999999999999999999999886643
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-85 Score=731.02 Aligned_cols=808 Identities=23% Similarity=0.334 Sum_probs=615.6
Q ss_pred HHhhcCCCcCCCCC--CCcHH-HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHH
Q 042091 119 RRNSFGSNTYPLKK--GRSFL-NFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDY 195 (1023)
Q Consensus 119 r~~~~G~N~~~~~~--~~~~~-~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~ 195 (1023)
++++|-+|.+...| ..+|. ..+++||+-..++++++.+..++++.+... ....|+.+ ..+++++..+-+++.|+
T Consensus 75 ~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig-~l~ty~~p--l~fvl~itl~keavdd~ 151 (1051)
T KOG0210|consen 75 RRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIG-YLSTYWGP--LGFVLTITLIKEAVDDL 151 (1051)
T ss_pred ccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheec-chhhhhHH--HHHHHHHHHHHHHHHHH
Confidence 45568899887655 33444 346899999999999998888887766432 22222222 22333334456788888
Q ss_pred HHHHHHHHHhccccCceEEEE-ECCEEEEEEeccceeccEEEecCCCccCccEEEEeeC----CeEEeeccccCCCceec
Q 042091 196 RQSLQFQNLNKEKRNIQLEAM-RGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGH----SLAIDESSMTGESKIVR 270 (1023)
Q Consensus 196 ~~~~~~~~l~~~~~~~~~~V~-R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~----~l~VDES~LTGES~pv~ 270 (1023)
++.+..+.++.++ .+++ |+|...+ ++++|++||+|.+..+++||||.+++..+ +|.|-+..|+||++.+.
T Consensus 152 ~r~~rd~~~Nse~----y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 152 KRRRRDRELNSEK----YTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHHHhhhhhhhhh----heeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 8877777666554 2444 8887666 99999999999999999999999999853 37999999999997665
Q ss_pred cCC----------------------------------------------CCCeeeccceEeecceeEEEEEEecccHHHH
Q 042091 271 KDH----------------------------------------------KTPFLMSGCKVADGVGTMMVTGVGINTEWGL 304 (1023)
Q Consensus 271 K~~----------------------------------------------~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~ 304 (1023)
|-+ -+|.++++|.+.+|.+.++|++||.+|+.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 532 14679999999999999999999999953
Q ss_pred HHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHh
Q 042091 305 LMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIA 384 (1023)
Q Consensus 305 i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 384 (1023)
.| +...++.+.--++..+|.+.+.++...++++++..+. .|.. ..|+ ..+...
T Consensus 305 vM-Nts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~------~g~~------~~wy--------------i~~~Rf 357 (1051)
T KOG0210|consen 305 VM-NTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM------KGFG------SDWY--------------IYIIRF 357 (1051)
T ss_pred Hh-ccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh------hcCC------CchH--------------HHHHHH
Confidence 33 4445566666778889999998877666655443221 1111 1232 122222
Q ss_pred hcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhC----CcccccchhhhhccCceeeeeCCccccccCceEEEEEEe
Q 042091 385 TNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMAD----KALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFI 460 (1023)
Q Consensus 385 ~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~----~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~ 460 (1023)
+.++-..+|..|-..+.++...-...+.++ |.+||....-|+||++.++.+|||||||+|+|.+++++.
T Consensus 358 -------llLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHL 430 (1051)
T KOG0210|consen 358 -------LLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHL 430 (1051)
T ss_pred -------HHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeee
Confidence 556667799999998888888777777765 567999999999999999999999999999999999998
Q ss_pred CCcccCCCC-------------------------CCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHH
Q 042091 461 GRKKINPPD-------------------------DSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAIL 515 (1023)
Q Consensus 461 ~~~~~~~~~-------------------------~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All 515 (1023)
+.-.|+.+. .....+..+.++ ..+++.||+.....+++|+..|+..+|+|.|++
T Consensus 431 GTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~-V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiV 509 (1051)
T KOG0210|consen 431 GTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNA-VLALALCHNVTPVFEDDGEVSYQAASPDEVAIV 509 (1051)
T ss_pred eeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHH-HHHHHHhccCCcccCCCceEEeecCCCCeEEEE
Confidence 754443210 011223333333 356777777666666667888999999999999
Q ss_pred HHHHHcCCChhccc-------------ccccEEEEecCCCCCceEEEEEeec-CCeEEEEEeCchHHHHHhhccccccCC
Q 042091 516 SWAVKLGMKFDRVR-------------SETTVLHVFPFNSEKKRGGVAVKRI-NSEVHVHWKGAAEMILASCTKYLDTDG 581 (1023)
Q Consensus 516 ~~a~~~g~~~~~~~-------------~~~~il~~~~F~s~~k~msviv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~ 581 (1023)
+|.+..|+.+..+. .+|+|+++|||+|+.||||++|+.+ .+++..|.|||+-.|....+.
T Consensus 510 kwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~------ 583 (1051)
T KOG0210|consen 510 KWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY------ 583 (1051)
T ss_pred EeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc------
Confidence 99998887654332 2689999999999999999999987 688999999999887654321
Q ss_pred ccccCCchHHHHHHHHHHHHhccchhhhhhhccccccC---------------------------CCCCCCcEEEeeeec
Q 042091 582 QLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKW---------------------------TLPEEELILLAIVGI 634 (1023)
Q Consensus 582 ~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~---------------------------~~~e~~l~~lG~i~~ 634 (1023)
+ ++.++....||++|+|++.+|.|.+++++ ...|.|+.++|+.|.
T Consensus 584 -----N---dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGV 655 (1051)
T KOG0210|consen 584 -----N---DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGV 655 (1051)
T ss_pred -----c---hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccCh
Confidence 1 57788889999999999999999984321 135899999999999
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC-----------------------CCCCeeeec
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE-----------------------ANDPNIIEG 691 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~-----------------------~~~~~vi~g 691 (1023)
||+++++++.+++.||+|||+|||+|||..+||..||+..++...+.. .+.+++++|
T Consensus 656 EDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G 735 (1051)
T KOG0210|consen 656 EDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDG 735 (1051)
T ss_pred HHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcC
Confidence 999999999999999999999999999999999999999999987652 467899999
Q ss_pred hhhhcc---CHHHHHHHHhhc--eEeccCCHhhHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHH
Q 042091 692 KVFRAL---SDKEREKVAQEI--TVMGRSSPNDKLLLVQALRKG-GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAK 765 (1023)
Q Consensus 692 ~~~~~l---~~~~~~~~~~~~--~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak 765 (1023)
+.++-. -++|+.++..++ .|+|||+|+||+++++.+|++ |..|+++|||.||+.|+++||+||++-.+....|.
T Consensus 736 ~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQAS 815 (1051)
T KOG0210|consen 736 ESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQAS 815 (1051)
T ss_pred chHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccc
Confidence 988753 356777766654 689999999999999999987 99999999999999999999999966444455688
Q ss_pred hccCccccCCChhHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhH---HHHHHHHHHHHHHHH
Q 042091 766 ENSDIIILDDNFASVVKVVRW-GRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNA---VQLLWVNLIMDTLGA 841 (1023)
Q Consensus 766 ~~adiil~~~~~~~i~~~i~~-gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~---~qll~~nli~d~l~~ 841 (1023)
-+||+.+. .|+.+.+++-| ||..|+|-.+.-+|.+...++...++.++.....+.|..- +.|.-+..+++++|.
T Consensus 816 LAADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPV 893 (1051)
T KOG0210|consen 816 LAADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPV 893 (1051)
T ss_pred hhccccHH--HHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhh
Confidence 99999998 79999999744 9999999999999999999998888888877766665544 446678889999999
Q ss_pred HHhccCC-CCccccccCC-------CCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhH
Q 042091 842 LALATEP-PTDHLMHRLP-------VGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTM 913 (1023)
Q Consensus 842 lal~~e~-~~~~~m~~~P-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~ 913 (1023)
+++..+. .++++-...| .+|.-++.++..| .+.++||+.++++..+.-. . .......++
T Consensus 894 FSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iw---vLISiYQG~vim~g~~~l~---~-------~ef~~ivai 960 (1051)
T KOG0210|consen 894 FSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIW---VLISIYQGSVIMYGALLLF---D-------TEFIHIVAI 960 (1051)
T ss_pred heeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhh---hhHHHHcccHHHHHHHHHh---h-------hhheEeeee
Confidence 9998654 2333333333 3444455554444 7789999988876543311 1 112344567
Q ss_pred HHHHHHHHHHHhhc-ccCCCCccceeecCcchHHHHHHHHHHHHHHHHHHHHHHHcccCCC-CCHHHHHHHHHHHHHHHH
Q 042091 914 IFNAFVLSQIFNEF-NARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVK-LDWKLWLASIGIGLFSWP 991 (1023)
Q Consensus 914 ~f~~~v~~~~~~~~-~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~w~~~~~~~~~~~~ 991 (1023)
.|+++++..+.... ..++ .+|+.+.+-++++++.++.+++++++|.... ++|.+.+...++.+++++
T Consensus 961 sFtaLi~tELiMVaLtv~t-----------w~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~L 1029 (1051)
T KOG0210|consen 961 SFTALILTELIMVALTVRT-----------WHWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCL 1029 (1051)
T ss_pred eeHHHHHHHHHHHhhhhhh-----------hhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888777765532 2222 2566666777888888888999999887654 467777777888889999
Q ss_pred HHHHhhhccCCCCCchhhhc
Q 042091 992 LAVLGKMIPVPKTPLAVYFV 1011 (1023)
Q Consensus 992 ~~~~~k~~~~~~~p~~~~~~ 1011 (1023)
+-++.|+++|+..|.++...
T Consensus 1030 pl~~~K~lrrk~sPpSYaKl 1049 (1051)
T KOG0210|consen 1030 PLYFIKALRRKLSPPSYAKL 1049 (1051)
T ss_pred HHHHHHHHHhhcCCcchhhc
Confidence 99999999999999886543
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-85 Score=736.85 Aligned_cols=850 Identities=19% Similarity=0.241 Sum_probs=618.5
Q ss_pred hhhhccccccccccchhhHHHHHHHHhhhhhhhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHH
Q 042091 58 LVLNASRRFRYTLDLKKEEEKEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFL 137 (1023)
Q Consensus 58 ~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~ 137 (1023)
.|-+++.||-|+++.+++...+..-+ +.++... . .+|.. ++.++..-+.+||.|++..+ .++|.
T Consensus 126 ~F~Fqk~ry~~~~e~~~F~~~~fp~~-----------~~~g~~~-k--~~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~ 189 (1160)
T KOG0209|consen 126 FFEFQKKRYLYDEEKGKFSRLTFPTD-----------EPFGYFQ-K--STGHE-EESEIKLAKHKYGKNKFDIV-VPTFS 189 (1160)
T ss_pred EEEEEEeeEEEcccccceeccccCcC-----------Ccchhhh-h--ccCcc-hHHHHHHHHHHhcCCccccC-CccHH
Confidence 47888999999998877765544322 1122223 3 35877 44578777788999999976 68999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhccccCceEE
Q 042091 138 NFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTA---ISDYRQSLQFQNLNKEKRNIQLE 214 (1023)
Q Consensus 138 ~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~---~~~~~~~~~~~~l~~~~~~~~~~ 214 (1023)
++|.+....|+++++.+|..+++.- +.||.++..+ ++++ .+++ .++.+.-+.++++... +..+.
T Consensus 190 eLFkE~A~aPfFVFQVFcvgLWCLD--------eyWYySlFtL--fMli-~fE~tlV~Qrm~~lse~R~Mg~k--py~I~ 256 (1160)
T KOG0209|consen 190 ELFKEHAVAPFFVFQVFCVGLWCLD--------EYWYYSLFTL--FMLI-AFEATLVKQRMRTLSEFRTMGNK--PYTIN 256 (1160)
T ss_pred HHHHHhccCceeeHhHHhHHHHHhH--------HHHHHHHHHH--HHHH-HHHHHHHHHHHHHHHHHHhcCCC--ceEEE
Confidence 9999999999999999998888755 3788864333 3333 3333 3444444555555433 36899
Q ss_pred EEECCEEEEEEeccceeccEEEecC---CCccCccEEEEeeCCeEEeeccccCCCceeccCC----------------CC
Q 042091 215 AMRGGKAVKISIFDVVVGEIVPLRI---GDQVPADGVLVTGHSLAIDESSMTGESKIVRKDH----------------KT 275 (1023)
Q Consensus 215 V~R~g~~~~I~~~dLv~GDIV~l~~---Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~----------------~~ 275 (1023)
|+|+++|+.+.++||+|||+|.+.. ...||||.+|+.|+ |.||||||||||.|..|.+ +.
T Consensus 257 v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-ciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~ 335 (1160)
T KOG0209|consen 257 VYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-CIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKL 335 (1160)
T ss_pred EEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-eeechhhhcCCCccccccccccCChhhhcccccccce
Confidence 9999999999999999999999987 67899999999997 6999999999999999975 23
Q ss_pred CeeeccceEe-------------ecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 042091 276 PFLMSGCKVA-------------DGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVL 342 (1023)
Q Consensus 276 ~~l~aGt~v~-------------~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~ 342 (1023)
+++|+||+++ +|.+.+.|++||.+|..|++++.+-...++.|. |+...++++ +.+++|
T Consensus 336 hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa-----Nn~Etf~FI----LFLlVF 406 (1160)
T KOG0209|consen 336 HVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA-----NNRETFIFI----LFLLVF 406 (1160)
T ss_pred EEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee-----ccHHHHHHH----HHHHHH
Confidence 5899999987 678999999999999999999999887766554 444444333 345556
Q ss_pred HHHHHHHhhccc-cCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhC
Q 042091 343 AVLLVRFFTGHT-TKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMAD 421 (1023)
Q Consensus 343 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~ 421 (1023)
++...+|.|-.. .++. .. -.+.|.-+ +.|+...+|+.||+-++++...+...++|.
T Consensus 407 AiaAa~Yvwv~Gskd~~-Rs---------------rYKL~LeC-------~LIlTSVvPpELPmELSmAVNsSL~ALak~ 463 (1160)
T KOG0209|consen 407 AIAAAGYVWVEGSKDPT-RS---------------RYKLFLEC-------TLILTSVVPPELPMELSMAVNSSLIALAKL 463 (1160)
T ss_pred HHHhhheEEEecccCcc-hh---------------hhheeeee-------eEEEeccCCCCCchhhhHHHHHHHHHHHHh
Confidence 666555654332 2221 11 23444444 778888999999999999999999999999
Q ss_pred CcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCC
Q 042091 422 KALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGE 501 (1023)
Q Consensus 422 ~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~ 501 (1023)
++.|..+-.+.-.|++|++|||||||||+..|.|..+--....-......+..+.+.. ..+++||+-.. .+ +
T Consensus 464 ~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~----~vlAscHsLv~-le-~-- 535 (1160)
T KOG0209|consen 464 GVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETV----LVLASCHSLVL-LE-D-- 535 (1160)
T ss_pred ceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHH----HHHHHHHHHHH-hc-C--
Confidence 9999999999999999999999999999999999887531111111111112222222 34556665322 22 1
Q ss_pred ceeecCChHHHHHHHHHHHcCCChhc------cc---ccccEEEEecCCCCCceEEEEEeecC----CeEEEEEeCchHH
Q 042091 502 AVEVSGSPTEKAILSWAVKLGMKFDR------VR---SETTVLHVFPFNSEKKRGGVAVKRIN----SEVHVHWKGAAEM 568 (1023)
Q Consensus 502 ~~~~~g~p~e~All~~a~~~g~~~~~------~~---~~~~il~~~~F~s~~k~msviv~~~~----~~~~~~~KGa~e~ 568 (1023)
...|||.|+|.+++.. .+.+. .+ ...+|.+.+.|+|+.|||+|++...+ .++.+.+|||||.
T Consensus 536 --~lVGDPlEKA~l~~v~---W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEv 610 (1160)
T KOG0209|consen 536 --KLVGDPLEKATLEAVG---WNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEV 610 (1160)
T ss_pred --cccCChHHHHHHHhcC---cccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHH
Confidence 3789999999998753 21111 11 14678999999999999999987653 3688999999999
Q ss_pred HHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhcccc---------ccCCCCCCCcEEEeeeeccCCCc
Q 042091 569 ILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFIL---------DKWTLPEEELILLAIVGIKDPCR 639 (1023)
Q Consensus 569 il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~---------~~~~~~e~~l~~lG~i~~~D~lr 639 (1023)
|..+..... +.+++...+|+++|.||+|++||++. -+++..|+||+|.|++.|..|+|
T Consensus 611 i~~ml~dvP-------------~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK 677 (1160)
T KOG0209|consen 611 IQEMLRDVP-------------KDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLK 677 (1160)
T ss_pred HHHHHHhCc-------------hhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCC
Confidence 988866431 56888899999999999999999994 24577899999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCC------------------------------------CC
Q 042091 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDA------------------------------------EA 683 (1023)
Q Consensus 640 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~------------------------------------~~ 683 (1023)
+|++++|+.|++.+++++|+||||+.||.++|+++||..... ..
T Consensus 678 ~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~ 757 (1160)
T KOG0209|consen 678 PDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAE 757 (1160)
T ss_pred ccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhh
Confidence 999999999999999999999999999999999999976411 02
Q ss_pred CCCeeeechhhhccCH-HHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCH
Q 042091 684 NDPNIIEGKVFRALSD-KEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTE 762 (1023)
Q Consensus 684 ~~~~vi~g~~~~~l~~-~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~ 762 (1023)
.++++++|..++.+.. +++.++++++.||||+.|.||..++..+++.|+.++|+|||+||+.|||+||||||+- ++++
T Consensus 758 ~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~ 836 (1160)
T KOG0209|consen 758 THDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL-NNPE 836 (1160)
T ss_pred hhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh-cCCh
Confidence 3467889999988643 4788999999999999999999999999999999999999999999999999999985 3332
Q ss_pred H-----------------------------------------------------------------------HHhccCcc
Q 042091 763 V-----------------------------------------------------------------------AKENSDII 771 (1023)
Q Consensus 763 ~-----------------------------------------------------------------------ak~~adii 771 (1023)
. |.-+|.+.
T Consensus 837 e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFT 916 (1160)
T KOG0209|consen 837 ESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFT 916 (1160)
T ss_pred hhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccc
Confidence 0 01123333
Q ss_pred ccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCc
Q 042091 772 ILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTD 851 (1023)
Q Consensus 772 l~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~ 851 (1023)
-.-.+.+++.++|+.||++.-+.-|.+.. +.-|..... .-++.++.-..-++..|...--+++. ...+.+...+|-+
T Consensus 917 sK~asv~~v~~IIrQGRctLVtTlQMfKI-LALN~LisA-YslSvlyldGVKfgD~QaTisGlLla-~cFlfISrskPLe 993 (1160)
T KOG0209|consen 917 SKLASVSSVTHIIRQGRCTLVTTLQMFKI-LALNCLISA-YSLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKPLE 993 (1160)
T ss_pred cccchHHHHHHHHHhcchhHHHHHHHHHH-HHHHHHHHH-HHHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCchh
Confidence 33336889999999999999887766554 233332211 12334445557788888877776654 3456777889999
Q ss_pred cccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcccc-ccc--cccccccccchhHHHHHHHHHHHHhh-c
Q 042091 852 HLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILH-LEG--ERRQHASDVKNTMIFNAFVLSQIFNE-F 927 (1023)
Q Consensus 852 ~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~--~~~~~~~~~~~t~~f~~~v~~~~~~~-~ 927 (1023)
.+-+..|. .+++|..+...++.|...+...++++.-.....-+ ... ..........+|.+|..-...|+... .
T Consensus 994 tLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAV 1070 (1160)
T KOG0209|consen 994 TLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAV 1070 (1160)
T ss_pred hHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhh
Confidence 99888884 56888777777888888877766655433221111 000 11233456678888877777777653 3
Q ss_pred ccCCCCccceeecCcchHHHHHHHHHHHHHHHHHH----HHHHHcccCCCCCHHHHHHH----HHHHHHHHHHHHHhhhc
Q 042091 928 NARKPDEINVFTGVTKNYLFMGIIGITCVLQIIII----EFLGKFTKTVKLDWKLWLAS----IGIGLFSWPLAVLGKMI 999 (1023)
Q Consensus 928 ~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~~~w~~~----~~~~~~~~~~~~~~k~~ 999 (1023)
|-+ ..++...+..|+.++.+++++..+.+..+ +=++..|.+++++-.+-... ++--+++|+++.+.|++
T Consensus 1071 NY~---G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~ 1147 (1160)
T KOG0209|consen 1071 NYQ---GRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFF 1147 (1160)
T ss_pred hcc---CcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 34566678889877776665544333332 44677888888874332222 22234567777777776
Q ss_pred cCCCCC
Q 042091 1000 PVPKTP 1005 (1023)
Q Consensus 1000 ~~~~~p 1005 (1023)
-...+|
T Consensus 1148 f~~~k~ 1153 (1160)
T KOG0209|consen 1148 FGDHKP 1153 (1160)
T ss_pred ccCCCc
Confidence 554443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-84 Score=767.86 Aligned_cols=509 Identities=29% Similarity=0.404 Sum_probs=433.9
Q ss_pred ccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccccCceEEEEE-CCEEEEEEeccceeccEEEecCCCccCccEEE
Q 042091 172 GWYDGASIAFAVFLV-IVVTAISDYRQSLQFQNLNKEKRNIQLEAMR-GGKAVKISIFDVVVGEIVPLRIGDQVPADGVL 249 (1023)
Q Consensus 172 ~~~~~~~i~~~lll~-~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R-~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgil 249 (1023)
.||+...++++++++ -+++.....|..++.++|.+..+ ..+++++ ||++++|+++||+|||+|.|+|||+||+||++
T Consensus 172 ~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p-~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V 250 (713)
T COG2217 172 VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAP-KTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVV 250 (713)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEE
Confidence 566766665555544 47788888888888999988876 5776665 66699999999999999999999999999999
Q ss_pred EeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHH
Q 042091 250 VTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATF 329 (1023)
Q Consensus 250 l~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~ 329 (1023)
++|++ .||||+|||||.|+.|.+++. +++||.+.+|..+++|+++|.+|.+++|++++++++..++|.|+.+|+++.+
T Consensus 251 ~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~ 328 (713)
T COG2217 251 VSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASY 328 (713)
T ss_pred EeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHc
Confidence 99998 999999999999999999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHH
Q 042091 330 IGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTL 409 (1023)
Q Consensus 330 i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~ 409 (1023)
+++..+++++++|++|.+. +. . ++...+..+ +++++++|||+|.+++|+
T Consensus 329 fvp~vl~ia~l~f~~w~~~---~~--~-------------------~~~~a~~~a-------~avLVIaCPCALgLAtP~ 377 (713)
T COG2217 329 FVPVVLVIAALTFALWPLF---GG--G-------------------DWETALYRA-------LAVLVIACPCALGLATPT 377 (713)
T ss_pred cHHHHHHHHHHHHHHHHHh---cC--C-------------------cHHHHHHHH-------HhheeeeCccHHHhHHHH
Confidence 9999999998888854322 11 0 134566667 999999999999999999
Q ss_pred HHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHcc
Q 042091 410 TLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQN 489 (1023)
Q Consensus 410 ~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~ 489 (1023)
++..++.+.+++|+++|+..++|.++++|+++||||||||+|+|+|+++...+. + .++++.+ +.+.
T Consensus 378 ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--------e~~~L~l---aAal- 443 (713)
T COG2217 378 AILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--------EDELLAL---AAAL- 443 (713)
T ss_pred HHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C--------HHHHHHH---HHHH-
Confidence 999999999999999999999999999999999999999999999999875422 0 1223322 2211
Q ss_pred CCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHH
Q 042091 490 TTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMI 569 (1023)
Q Consensus 490 ~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~i 569 (1023)
+..|.||+.+|+++++...+.. ... ..+.+ ...|+..+.++..+.+ |++..+
T Consensus 444 -------------E~~S~HPiA~AIv~~a~~~~~~--~~~----~~~~i------~G~Gv~~~v~g~~v~v---G~~~~~ 495 (713)
T COG2217 444 -------------EQHSEHPLAKAIVKAAAERGLP--DVE----DFEEI------PGRGVEAEVDGERVLV---GNARLL 495 (713)
T ss_pred -------------HhcCCChHHHHHHHHHHhcCCC--Ccc----ceeee------ccCcEEEEECCEEEEE---cCHHHH
Confidence 1357899999999998876621 111 12222 2556766655544444 988776
Q ss_pred HHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHH
Q 042091 570 LASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLC 649 (1023)
Q Consensus 570 l~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l 649 (1023)
.+.-.. .+ . ..+..+.+..+|..++.++ .|..++|++++.|++||+++++|++|
T Consensus 496 ~~~~~~----------~~---~-~~~~~~~~~~~G~t~v~va------------~dg~~~g~i~~~D~~R~~a~~aI~~L 549 (713)
T COG2217 496 GEEGID----------LP---L-LSERIEALESEGKTVVFVA------------VDGKLVGVIALADELRPDAKEAIAAL 549 (713)
T ss_pred hhcCCC----------cc---c-hhhhHHHHHhcCCeEEEEE------------ECCEEEEEEEEeCCCChhHHHHHHHH
Confidence 432110 01 1 3455677788898878888 66799999999999999999999999
Q ss_pred HhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHh
Q 042091 650 RDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRK 729 (1023)
Q Consensus 650 ~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~ 729 (1023)
|+.|++++|+||||..+|+++|+++||+ .+++.+.|+||.++|+.||+
T Consensus 550 ~~~Gi~~~mLTGDn~~~A~~iA~~lGId--------------------------------~v~AellPedK~~~V~~l~~ 597 (713)
T COG2217 550 KALGIKVVMLTGDNRRTAEAIAKELGID--------------------------------EVRAELLPEDKAEIVRELQA 597 (713)
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHHcChH--------------------------------hheccCCcHHHHHHHHHHHh
Confidence 9999999999999999999999999997 47899999999999999999
Q ss_pred CCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 042091 730 GGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAAL 809 (1023)
Q Consensus 730 ~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i 809 (1023)
+|++|+|+|||+||+|||++|||||||| +|+|+|+++||+++++|++..++++++.+|+++++|++|+.|++.||++.+
T Consensus 598 ~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~i 676 (713)
T COG2217 598 EGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAI 676 (713)
T ss_pred cCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 042091 810 LINVVA 815 (1023)
Q Consensus 810 ~~~~~~ 815 (1023)
+++.++
T Consensus 677 plA~~g 682 (713)
T COG2217 677 PLAAGG 682 (713)
T ss_pred HHHHHh
Confidence 988776
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-84 Score=714.78 Aligned_cols=659 Identities=24% Similarity=0.377 Sum_probs=521.4
Q ss_pred CCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcc
Q 042091 92 IRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEE 171 (1023)
Q Consensus 92 ~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~ 171 (1023)
++++++-+.|...- .||+++ |+++|+++||.|++.+++...+.+|+-- +-+|..+..-.+|++...+.- ..|.+.
T Consensus 21 ~p~eeVfeeL~~t~-~GLt~~--E~~eRlk~fG~NkleEkken~~lKFl~F-m~~PlswVMEaAAimA~~Lan-g~~~~~ 95 (942)
T KOG0205|consen 21 IPIEEVFEELLCTR-EGLTSD--EVEERLKIFGPNKLEEKKESKFLKFLGF-MWNPLSWVMEAAAIMAIGLAN-GGGRPP 95 (942)
T ss_pred CchhhhHHHHhcCC-CCCchH--HHHHHHHhhCchhhhhhhhhHHHHHHHH-HhchHHHHHHHHHHHHHHHhc-CCCCCc
Confidence 34677776665543 499998 8999999999999998776666666533 334445555566666554321 234556
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEe
Q 042091 172 GWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVT 251 (1023)
Q Consensus 172 ~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~ 251 (1023)
.|.|.+.|...++++..++.++|+.+......|.+... .+..|+|||+|.++.+.+||||||+.++.||+|||||+|++
T Consensus 96 DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA-~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~ 174 (942)
T KOG0205|consen 96 DWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLA-PKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLE 174 (942)
T ss_pred chhhhhhhheeeeecceeeeeeccccchHHHHHHhccC-cccEEeecCeeeeeeccccccCceeeeccCCEecCccceec
Confidence 89999888888888889999999999999888887664 68899999999999999999999999999999999999999
Q ss_pred eCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHH
Q 042091 252 GHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIG 331 (1023)
Q Consensus 252 g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~ 331 (1023)
|+-|+||+|.|||||.|+.|.+++. +|+||.|.+|++.++|++||.+|..|+-..++.. ....-.+|+-++.+..+..
T Consensus 175 gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci 252 (942)
T KOG0205|consen 175 GDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCI 252 (942)
T ss_pred CCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhHHH
Confidence 9999999999999999999999998 9999999999999999999999999999988876 6677889999998887654
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhh-hhccCchhHHHHHH
Q 042091 332 IVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVV-VAVPEGLPLAVTLT 410 (1023)
Q Consensus 332 ~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv-~~iP~~L~lav~~~ 410 (1023)
.. +++.+++-++.+ ++ ..+- ..+..... +.+++ -.+|.+||..++.+
T Consensus 253 ~s-i~~g~lie~~vm-y~-~q~R----------------------~~r~~i~n-------LlvllIGgiPiamPtVlsvT 300 (942)
T KOG0205|consen 253 CS-IALGMLIEITVM-YP-IQHR----------------------LYRDGIDN-------LLVLLIGGIPIAMPTVLSVT 300 (942)
T ss_pred HH-HHHHHHHHHHhh-hh-hhhh----------------------hhhhhhhh-------eheeeecccccccceeeeeh
Confidence 42 222222222211 22 2110 11111111 33444 44999999999999
Q ss_pred HHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEE--E--EeCCcccCCCCCCCcccHHHHHHHHHHH
Q 042091 411 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVE--A--FIGRKKINPPDDSSQMHSIVIYLLSEGI 486 (1023)
Q Consensus 411 l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~--~--~~~~~~~~~~~~~~~~~~~~~~ll~~~i 486 (1023)
++.+..+|+++|+++++.+|+|.|+.+|++|+|||||||.|+++|.+ + +..| .+++.. +|..+.
T Consensus 301 MAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g-----------v~~D~~-~L~A~r 368 (942)
T KOG0205|consen 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG-----------VDKDDV-LLTAAR 368 (942)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC-----------CChHHH-HHHHHH
Confidence 99999999999999999999999999999999999999999999987 2 2221 122211 222333
Q ss_pred HccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCch
Q 042091 487 AQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAA 566 (1023)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~ 566 (1023)
+. .. ...|.+|.|++....+ ..+.+..++.++..|||+..||-...+..++|+.+-..||||
T Consensus 369 As----r~----------en~DAID~A~v~~L~d----PKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAP 430 (942)
T KOG0205|consen 369 AS----RK----------ENQDAIDAAIVGMLAD----PKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAP 430 (942)
T ss_pred Hh----hh----------cChhhHHHHHHHhhcC----HHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCCh
Confidence 22 11 1247899999987543 467788999999999999999999999999999999999999
Q ss_pred HHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCC-CCCCcEEEeeeeccCCCcccHHHH
Q 042091 567 EMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTL-PEEELILLAIVGIKDPCRPGVKDA 645 (1023)
Q Consensus 567 e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~-~e~~l~~lG~i~~~D~lr~~~~~~ 645 (1023)
|.|++.|..- .+-.+.+.+.+++||++|+|-+++||+...+++++ ......|+|+.-+-||||.+..++
T Consensus 431 eqil~l~~~~----------~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~t 500 (942)
T KOG0205|consen 431 EQILKLCNED----------HDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAET 500 (942)
T ss_pred HHHHHHhhcc----------CcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHH
Confidence 9999999752 11127788999999999999999999998776654 445678999999999999999999
Q ss_pred HHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechh-hhccCHHHHHHHHhhceEeccCCHhhHHHHH
Q 042091 646 VKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKV-FRALSDKEREKVAQEITVMGRSSPNDKLLLV 724 (1023)
Q Consensus 646 I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~-~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV 724 (1023)
|++....|++|.|+|||...-++..++++|+-+..-.. . .+-|.. =..+...+.++++++..=||.+.|+||.++|
T Consensus 501 irral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyps-s--~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV 577 (942)
T KOG0205|consen 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS-S--ALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIV 577 (942)
T ss_pred HHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCc-h--hhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHH
Confidence 99999999999999999999999999999987532210 0 011111 0123333556777777889999999999999
Q ss_pred HHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 042091 725 QALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTV 804 (1023)
Q Consensus 725 ~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ 804 (1023)
+.||++|+.|+|+|||+||+|+||.||+|||+. .++|.|+.+||+|++...++.+..++..+|.+|++++.+..|.+..
T Consensus 578 ~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsi 656 (942)
T KOG0205|consen 578 KILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 656 (942)
T ss_pred HHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehh
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999998777
Q ss_pred HHHHHHHHHHHHHhcCCCchhHHHHHHHHHH
Q 042091 805 NVAALLINVVAAISSGDVPLNAVQLLWVNLI 835 (1023)
Q Consensus 805 nv~~i~~~~~~~~~~~~~pl~~~qll~~nli 835 (1023)
.+-.++ .|.....-...-|+|...+++-++
T Consensus 657 tiriv~-gfml~alIw~~df~pfmvliiail 686 (942)
T KOG0205|consen 657 TIRIVF-GFMLIALIWEFDFSPFMVLIIAIL 686 (942)
T ss_pred HHHHHH-HHHHHHHHHHhcCCHHHHHHHHHh
Confidence 665442 222222222233455555544443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-78 Score=742.46 Aligned_cols=514 Identities=25% Similarity=0.340 Sum_probs=435.9
Q ss_pred HHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceecc
Q 042091 154 VAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGE 233 (1023)
Q Consensus 154 ~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GD 233 (1023)
++++.+++.+ .|.+++.+++++++..+++.+.+.|..+..++|.+..+ ..++|+|||++++|++++|+|||
T Consensus 195 ~a~~~a~~~~--------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p-~~a~vir~g~~~~v~~~~l~~GD 265 (741)
T PRK11033 195 VAAIGALFIG--------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVP-ETATRLRDGEREEVAIADLRPGD 265 (741)
T ss_pred HHHHHHHHHc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CEEEEEECCEEEEEEHHHCCCCC
Confidence 4455555554 46777666666666668888889999999999988876 68999999999999999999999
Q ss_pred EEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCC
Q 042091 234 IVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDN 313 (1023)
Q Consensus 234 IV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 313 (1023)
+|.|++||+|||||+|++|+. .||||+|||||.|+.|.+++. +|+||.+.+|.++++|+++|.+|.+|+|.+++++++
T Consensus 266 iv~v~~G~~IP~Dg~vi~g~~-~vdes~lTGEs~Pv~k~~Gd~-V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~ 343 (741)
T PRK11033 266 VIEVAAGGRLPADGKLLSPFA-SFDESALTGESIPVERATGEK-VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAE 343 (741)
T ss_pred EEEECCCCEEecceEEEECcE-EeecccccCCCCCEecCCCCe-eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhh
Confidence 999999999999999999975 999999999999999999987 999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhh
Q 042091 314 GEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVT 393 (1023)
Q Consensus 314 ~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ 393 (1023)
.+++|+|+.+++++.+++++.+++++++++++...+ +. + +...+..+ ++
T Consensus 344 ~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~--~~---~-------------------~~~~i~~a-------~s 392 (741)
T PRK11033 344 ERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF--AA---P-------------------WQEWIYRG-------LT 392 (741)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cC---C-------------------HHHHHHHH-------HH
Confidence 999999999999999999999999988887753221 10 0 33445556 89
Q ss_pred hhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCc
Q 042091 394 IVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQ 473 (1023)
Q Consensus 394 ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~ 473 (1023)
+++++|||+|.+++|+++..++.+++|+|+++|+.+++|+|+++|++|||||||||+|+|+|.++...+.
T Consensus 393 vlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~---------- 462 (741)
T PRK11033 393 LLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG---------- 462 (741)
T ss_pred HHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC----------
Confidence 9999999999999999999999999999999999999999999999999999999999999999875321
Q ss_pred ccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceE---EEE
Q 042091 474 MHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRG---GVA 550 (1023)
Q Consensus 474 ~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~m---svi 550 (1023)
..++ +++..+.+. +..+.||+++|+++++.+.+.+ +||.++++.+ ++.
T Consensus 463 ~~~~--~~l~~aa~~--------------e~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~ 513 (741)
T PRK11033 463 ISES--ELLALAAAV--------------EQGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIE 513 (741)
T ss_pred CCHH--HHHHHHHHH--------------hcCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEE
Confidence 1111 122211111 1236799999999999876643 3455555543 444
Q ss_pred EeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEe
Q 042091 551 VKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLA 630 (1023)
Q Consensus 551 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG 630 (1023)
...++..+. -|+++.+.+ ++ +++.+.++.+..+|+|++++| .|.+++|
T Consensus 514 ~~~~g~~~~---ig~~~~~~~--------------~~---~~~~~~~~~~~~~g~~~v~va------------~~~~~~g 561 (741)
T PRK11033 514 GQVNGERVL---ICAPGKLPP--------------LA---DAFAGQINELESAGKTVVLVL------------RNDDVLG 561 (741)
T ss_pred EEECCEEEE---Eecchhhhh--------------cc---HHHHHHHHHHHhCCCEEEEEE------------ECCEEEE
Confidence 343444333 388876532 11 234556778899999999999 4678999
Q ss_pred eeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhce
Q 042091 631 IVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEIT 710 (1023)
Q Consensus 631 ~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~ 710 (1023)
+++++|++|||++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 562 ~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~--------------------------------- 608 (741)
T PRK11033 562 LIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID--------------------------------- 608 (741)
T ss_pred EEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---------------------------------
Confidence 99999999999999999999999999999999999999999999996
Q ss_pred EeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHH
Q 042091 711 VMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSV 790 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~ 790 (1023)
.+++.+|+||.++|+.+|+. +.|+|+|||.||+|||++|||||||| ++++.++++||+++.++++..+..++++||++
T Consensus 609 ~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~ 686 (741)
T PRK11033 609 FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRAT 686 (741)
T ss_pred eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHH
Confidence 25678999999999999965 58999999999999999999999999 89999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHH
Q 042091 791 FANIQKFIQFQLTVNVAALLINVVA 815 (1023)
Q Consensus 791 ~~~i~~~i~~~l~~nv~~i~~~~~~ 815 (1023)
++||++|+.|++.||++.+++.+++
T Consensus 687 ~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 687 HANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988887654
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-79 Score=706.20 Aligned_cols=565 Identities=25% Similarity=0.324 Sum_probs=455.6
Q ss_pred ccccchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccccCceEEEEECCE-EEEEEeccceeccEEEecCCCccCccE
Q 042091 170 EEGWYDGASIAFAVFLVI-VVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGK-AVKISIFDVVVGEIVPLRIGDQVPADG 247 (1023)
Q Consensus 170 ~~~~~~~~~i~~~lll~~-~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~-~~~I~~~dLv~GDIV~l~~Gd~VPaDg 247 (1023)
+..+||...|++.++.+. +++....++....+.+|....+ .++.++.+|+ .++|+.+.|++||+|.|+||++||+||
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p-~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG 415 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAP-SKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDG 415 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCc-ccceEeecCCcceEeeeeeeccCCEEEECCCCcccccc
Confidence 557888877777665543 7777777777788888888775 6888888886 899999999999999999999999999
Q ss_pred EEEeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHH
Q 042091 248 VLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVA 327 (1023)
Q Consensus 248 ill~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~ 327 (1023)
++++|++ +||||++|||+.||.|++++. +.+||.+.+|...+.+|++|.+|.+++|.+++++++..++|+|+.+|+++
T Consensus 416 ~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~-ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia 493 (951)
T KOG0207|consen 416 VVVDGSS-EVDESLITGESMPVPKKKGST-VIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIA 493 (951)
T ss_pred EEEeCce-eechhhccCCceecccCCCCe-eeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhh
Confidence 9999987 999999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHH
Q 042091 328 TFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAV 407 (1023)
Q Consensus 328 ~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav 407 (1023)
.+++++.+++++.++++|.+...+... .+ ..+...+...|..+ +++++++|||+|.+++
T Consensus 494 ~yFvP~Vi~lS~~t~~~w~~~g~~~~~-~~-------------~~~~~~~~~a~~~a-------isVlviACPCaLgLAT 552 (951)
T KOG0207|consen 494 GYFVPVVIVLSLATFVVWILIGKIVFK-YP-------------RSFFDAFSHAFQLA-------ISVLVIACPCALGLAT 552 (951)
T ss_pred hcCCchhhHHHHHHHHHHHHHcccccc-Cc-------------chhhHHHHHHHHhh-------heEEEEECchhhhcCC
Confidence 999999999999999988764432110 00 01112345555666 9999999999999999
Q ss_pred HHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHH
Q 042091 408 TLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIA 487 (1023)
Q Consensus 408 ~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~ 487 (1023)
|++...+....+++|+|+|..+++|.+.++++++||||||||+|+++|.++....... ...+.+.+. .+.
T Consensus 553 PtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~--------~~~e~l~~v-~a~- 622 (951)
T KOG0207|consen 553 PTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI--------SLKEALALV-AAM- 622 (951)
T ss_pred ceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc--------cHHHHHHHH-HHH-
Confidence 9999999999999999999999999999999999999999999999999987643310 011122211 111
Q ss_pred ccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchH
Q 042091 488 QNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAE 567 (1023)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e 567 (1023)
+..+.||+.+|++++|+..... .+...++....|..+.+. +-++..+.++. -|.-+
T Consensus 623 ---------------Es~SeHPig~AIv~yak~~~~~----~~~~~~~~~~~~pg~g~~--~~~~~~~~~i~---iGN~~ 678 (951)
T KOG0207|consen 623 ---------------ESGSEHPIGKAIVDYAKEKLVE----PNPEGVLSFEYFPGEGIY--VTVTVDGNEVL---IGNKE 678 (951)
T ss_pred ---------------hcCCcCchHHHHHHHHHhcccc----cCccccceeecccCCCcc--cceEEeeeEEe---echHH
Confidence 1336799999999999976511 111122233333333322 33333444433 37777
Q ss_pred HHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHH
Q 042091 568 MILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVK 647 (1023)
Q Consensus 568 ~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~ 647 (1023)
.+... |... + +++++.+++...+|..+.+++ -|.++.|+++++|++|||+..+|+
T Consensus 679 ~~~r~--------~~~~--~---~~i~~~~~~~e~~g~tvv~v~------------vn~~l~gv~~l~D~vr~~a~~av~ 733 (951)
T KOG0207|consen 679 WMSRN--------GCSI--P---DDILDALTESERKGQTVVYVA------------VNGQLVGVFALEDQVRPDAALAVA 733 (951)
T ss_pred HHHhc--------CCCC--c---hhHHHhhhhHhhcCceEEEEE------------ECCEEEEEEEeccccchhHHHHHH
Confidence 65432 2211 1 457788888889999999998 678999999999999999999999
Q ss_pred HHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHH
Q 042091 648 LCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQAL 727 (1023)
Q Consensus 648 ~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l 727 (1023)
.||+.|++++|+||||..+|.++|+++|+. .|+|...|+||.++|+.+
T Consensus 734 ~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--------------------------------~V~aev~P~~K~~~Ik~l 781 (951)
T KOG0207|consen 734 ELKSMGIKVVMLTGDNDAAARSVAQQVGID--------------------------------NVYAEVLPEQKAEKIKEI 781 (951)
T ss_pred HHHhcCceEEEEcCCCHHHHHHHHHhhCcc--------------------------------eEEeccCchhhHHHHHHH
Confidence 999999999999999999999999999976 589999999999999999
Q ss_pred HhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 042091 728 RKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVA 807 (1023)
Q Consensus 728 q~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~ 807 (1023)
|++++.|+|+|||+||+|||.+|||||+|| .|+++|.++||++++++++..++.+++.+|++.+|||.|+.|+++||++
T Consensus 782 q~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~ 860 (951)
T KOG0207|consen 782 QKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLV 860 (951)
T ss_pred HhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC--CCchhHHHHHHHHHHHHHHHHHHhc-cCCCC
Q 042091 808 ALLINVVAAISSG--DVPLNAVQLLWVNLIMDTLGALALA-TEPPT 850 (1023)
Q Consensus 808 ~i~~~~~~~~~~~--~~pl~~~qll~~nli~d~l~~lal~-~e~~~ 850 (1023)
.++++....+-.+ -.|.-+.-....+.+--.+.++.|= +.+|+
T Consensus 861 ~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~ 906 (951)
T KOG0207|consen 861 GIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPT 906 (951)
T ss_pred hhhhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccc
Confidence 9988654433333 1233333333334433334444443 45554
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-76 Score=706.82 Aligned_cols=492 Identities=37% Similarity=0.547 Sum_probs=429.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-ccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeec
Q 042091 182 AVFLVIVVTAISDYRQSLQFQNLNKE-KRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDES 260 (1023)
Q Consensus 182 ~lll~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES 260 (1023)
++++..+++.+.+++.++..+++.+. .++..++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcc
Confidence 44566678889999999999998872 334789999999 999999999999999999999999999999996 699999
Q ss_pred cccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHH-HHHHHHHHHHHH
Q 042091 261 SMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVA-TFIGIVGLAVAF 339 (1023)
Q Consensus 261 ~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~-~~i~~~~l~~a~ 339 (1023)
+|||||.|+.|.+++. +++||.+.+|...+.|+.+|.+|..+++...+.++...++|++++.++++ .++.++.+++++
T Consensus 83 ~LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 83 NLTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred cccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887 99999999999999999999999999999999887777899999999999 677777777776
Q ss_pred HHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHH
Q 042091 340 LVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMM 419 (1023)
Q Consensus 340 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~ 419 (1023)
++++++..++... + ++...+..+ +++++++|||+||+++++++..+..+|+
T Consensus 162 ~~~~~~~~~~~~~---~-------------------~~~~~~~~~-------~~vl~~~~P~aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 162 AVFLFWAIGLWDP---N-------------------SIFKIFLRA-------LILLVIAIPIALPLAVTIALAVGDARLA 212 (499)
T ss_pred HHHHHHHHHHccc---c-------------------cHHHHHHHH-------HHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 6666554321100 0 134556666 9999999999999999999999999999
Q ss_pred hCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCC
Q 042091 420 ADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKD 499 (1023)
Q Consensus 420 ~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~ 499 (1023)
++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+.
T Consensus 213 ~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------------ 256 (499)
T TIGR01494 213 KKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------------------------------ 256 (499)
T ss_pred HCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC------------------------------------
Confidence 99999999999999999999999999999999999999875321
Q ss_pred CCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhcccccc
Q 042091 500 GEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDT 579 (1023)
Q Consensus 500 ~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~ 579 (1023)
++.++||+|+|++++++..+ ++..||++.+++|+++++.+++ .++||+++.+.+.|..
T Consensus 257 ---~~~s~hp~~~ai~~~~~~~~------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~---- 314 (499)
T TIGR01494 257 ---EYLSGHPDERALVKSAKWKI------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD---- 314 (499)
T ss_pred ---CcCCCChHHHHHHHHhhhcC------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH----
Confidence 12367999999999886421 2568999999999999875333 3689999999998853
Q ss_pred CCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEE
Q 042091 580 DGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMV 659 (1023)
Q Consensus 580 ~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~ml 659 (1023)
+.+.+++++.+|+|++++||+ .+++|+++++|++|++++++|+.|+++|++++|+
T Consensus 315 -------------~~~~~~~~~~~g~~~~~~a~~------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~l 369 (499)
T TIGR01494 315 -------------LEEKVKELAQSGLRVLAVASK------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIML 369 (499)
T ss_pred -------------HHHHHHHHHhCCCEEEEEEEC------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEE
Confidence 122344677899999999954 3799999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcC
Q 042091 660 TGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGD 739 (1023)
Q Consensus 660 TGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGD 739 (1023)
|||+..+|..+|+++|+ +++++|+||.++|+.+|++|+.|+|+||
T Consensus 370 tGD~~~~a~~ia~~lgi-----------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGD 414 (499)
T TIGR01494 370 TGDNVLTAKAIAKELGI-----------------------------------FARVTPEEKAALVEALQKKGRVVAMTGD 414 (499)
T ss_pred cCCCHHHHHHHHHHcCc-----------------------------------eeccCHHHHHHHHHHHHHCCCEEEEECC
Confidence 99999999999999987 3789999999999999999999999999
Q ss_pred CccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 042091 740 GTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISS 819 (1023)
Q Consensus 740 G~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~ 819 (1023)
|.||+|||++|||||+|| |+++||++++++++..+..++++||++++++++++.|.+++|++.+++++++.+
T Consensus 415 g~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~-- 486 (499)
T TIGR01494 415 GVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV-- 486 (499)
T ss_pred ChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 999999999999999997 689999999999999999999999999999999999999999998888776442
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHH
Q 042091 820 GDVPLNAVQLLWVNLIMDTLGALA 843 (1023)
Q Consensus 820 ~~~pl~~~qll~~nli~d~l~~la 843 (1023)
+|+++++.++++
T Consensus 487 ------------~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 ------------LNLVPPGLAALA 498 (499)
T ss_pred ------------HHHHhcchhhhc
Confidence 778888776653
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-75 Score=694.06 Aligned_cols=498 Identities=27% Similarity=0.399 Sum_probs=418.9
Q ss_pred cccchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccccCceEEEEEC-CEEEEEEeccceeccEEEecCCCccCccEE
Q 042091 171 EGWYDGASIAFAVFLVI-VVTAISDYRQSLQFQNLNKEKRNIQLEAMRG-GKAVKISIFDVVVGEIVPLRIGDQVPADGV 248 (1023)
Q Consensus 171 ~~~~~~~~i~~~lll~~-~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~-g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgi 248 (1023)
+.||+++++++++++.. +++...+++.++..++|.+..+ .+++|+|+ |++++|++++|+|||+|.|++||+|||||+
T Consensus 51 ~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p-~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~ 129 (562)
T TIGR01511 51 HTFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQP-STATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGT 129 (562)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceE
Confidence 47888887766665554 7787888888888888887765 67888875 777999999999999999999999999999
Q ss_pred EEeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHH
Q 042091 249 LVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVAT 328 (1023)
Q Consensus 249 ll~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~ 328 (1023)
+++|++ .||||+|||||.|+.|.+++. +|+||.+.+|.++++|+++|.+|.+|++.+++.+++.+++|+|+.+++++.
T Consensus 130 v~~g~~-~vdes~lTGEs~pv~k~~gd~-V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~ 207 (562)
T TIGR01511 130 VIEGES-EVDESLVTGESLPVPKKVGDP-VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAG 207 (562)
T ss_pred EEECce-EEehHhhcCCCCcEEcCCCCE-EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 999986 999999999999999999987 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHH
Q 042091 329 FIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVT 408 (1023)
Q Consensus 329 ~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~ 408 (1023)
++.++.++++++++++|. ..+..+ +++++++|||+|++++|
T Consensus 208 ~~~~~v~~~a~~~~~~~~--------------------------------~~~~~~-------~svlvvacPcaL~la~p 248 (562)
T TIGR01511 208 YFVPVVIAIALITFVIWL--------------------------------FALEFA-------VTVLIIACPCALGLATP 248 (562)
T ss_pred HHHHHHHHHHHHHHHHHH--------------------------------HHHHHH-------HHHHHHhccchhhhHHH
Confidence 999988887777665532 123344 89999999999999999
Q ss_pred HHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHc
Q 042091 409 LTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQ 488 (1023)
Q Consensus 409 ~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~ 488 (1023)
+++..++.+++++|+++|+++++|+|+++|+||||||||||+|+|+|.++...+. . ..++++.+ +.+.
T Consensus 249 ~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~-~--------~~~~~l~~---aa~~ 316 (562)
T TIGR01511 249 TVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGD-R--------DRTELLAL---AAAL 316 (562)
T ss_pred HHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCC-C--------CHHHHHHH---HHHH
Confidence 9999999999999999999999999999999999999999999999999865321 0 01222222 1111
Q ss_pred cCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHH
Q 042091 489 NTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEM 568 (1023)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~ 568 (1023)
+..+.||+++|+++++++.+....... -.+.. ...++....++.++ ..|+++.
T Consensus 317 --------------e~~s~HPia~Ai~~~~~~~~~~~~~~~----~~~~~------~g~Gi~~~~~g~~~---~iG~~~~ 369 (562)
T TIGR01511 317 --------------EAGSEHPLAKAIVSYAKEKGITLVEVS----DFKAI------PGIGVEGTVEGTKI---QLGNEKL 369 (562)
T ss_pred --------------hccCCChHHHHHHHHHHhcCCCcCCCC----CeEEE------CCceEEEEECCEEE---EEECHHH
Confidence 123579999999999987765432111 11111 23345445445443 4588887
Q ss_pred HHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHH
Q 042091 569 ILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKL 648 (1023)
Q Consensus 569 il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~ 648 (1023)
+.+. +. .++ ++..+|.+++.++ .|.+++|++.++|++||+++++|+.
T Consensus 370 ~~~~--------~~--~~~-----------~~~~~g~~~~~~~------------~~~~~~g~~~~~d~l~~~a~e~i~~ 416 (562)
T TIGR01511 370 LGEN--------AI--KID-----------GKAEQGSTSVLVA------------VNGELAGVFALEDQLRPEAKEVIQA 416 (562)
T ss_pred HHhC--------CC--CCC-----------hhhhCCCEEEEEE------------ECCEEEEEEEecccccHHHHHHHHH
Confidence 5331 11 011 1235788888877 6789999999999999999999999
Q ss_pred HHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHH
Q 042091 649 CRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALR 728 (1023)
Q Consensus 649 l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq 728 (1023)
|++.|++++|+|||+..++.++++++||. ++++..|++|.++++.++
T Consensus 417 Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---------------------------------~~~~~~p~~K~~~v~~l~ 463 (562)
T TIGR01511 417 LKRRGIEPVMLTGDNRKTAKAVAKELGIN---------------------------------VRAEVLPDDKAALIKELQ 463 (562)
T ss_pred HHHcCCeEEEEcCCCHHHHHHHHHHcCCc---------------------------------EEccCChHHHHHHHHHHH
Confidence 99999999999999999999999999994 467889999999999999
Q ss_pred hCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 042091 729 KGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAA 808 (1023)
Q Consensus 729 ~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~ 808 (1023)
++++.|+|+|||.||++|+++||+||+|| .+++.+++.||+++.++++..+.+++++||+++++|++|+.|++.||++.
T Consensus 464 ~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~ 542 (562)
T TIGR01511 464 EKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIA 542 (562)
T ss_pred HcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 89999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHH
Q 042091 809 LLINVVAA 816 (1023)
Q Consensus 809 i~~~~~~~ 816 (1023)
+++++.+.
T Consensus 543 i~la~~~~ 550 (562)
T TIGR01511 543 IPIAAGVL 550 (562)
T ss_pred HHHHHhhh
Confidence 88776444
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-75 Score=697.02 Aligned_cols=523 Identities=29% Similarity=0.422 Sum_probs=432.3
Q ss_pred HHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECC-EEEEEEecccee
Q 042091 153 IVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGG-KAVKISIFDVVV 231 (1023)
Q Consensus 153 l~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g-~~~~I~~~dLv~ 231 (1023)
.++++++++.+ .|.++..+++++++..+++.+++++.++..++|.+..+ ..++|+||| ++++|+++||+|
T Consensus 6 ~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~-~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 6 ALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAP-STARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCCeEEEEEHHHCCC
Confidence 34455555555 56777777777777778899999999999999987765 689999995 999999999999
Q ss_pred ccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhccc
Q 042091 232 GEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISE 311 (1023)
Q Consensus 232 GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 311 (1023)
||+|.+++||+|||||++++|+. .||||+|||||.|+.|.+++. +|+||.+.+|.++++|+++|.+|++|++.+.+.+
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~-v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~ 154 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDE-VFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEE 154 (556)
T ss_pred CCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCE-EeeceEECCceEEEEEEEecccCHHHHHHHHHHH
Confidence 99999999999999999999985 999999999999999999886 9999999999999999999999999999999988
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhh
Q 042091 312 DNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQ 391 (1023)
Q Consensus 312 ~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 391 (1023)
+..+++|+|+.+++++.++.++.++++++++++++.. +. . ..+..+
T Consensus 155 ~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~---~~-----------------------~-~~~~~~------- 200 (556)
T TIGR01525 155 AQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL---GA-----------------------L-GALYRA------- 200 (556)
T ss_pred HhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cc-----------------------c-hHHHHH-------
Confidence 8888999999999999999999888888877765321 11 0 234455
Q ss_pred hhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCC
Q 042091 392 VTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDS 471 (1023)
Q Consensus 392 v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 471 (1023)
+++++++|||+||+++|++++.++++|.++|+++|+++++|+||++|++|||||||||+|+|+|.+++..++..
T Consensus 201 ~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~------ 274 (556)
T TIGR01525 201 LAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS------ 274 (556)
T ss_pred HHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC------
Confidence 89999999999999999999999999999999999999999999999999999999999999999987643210
Q ss_pred CcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEE
Q 042091 472 SQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAV 551 (1023)
Q Consensus 472 ~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv 551 (1023)
...++++.+ +... +..+.||+++|+++++++.+.+... . + -.+.+| ..++..
T Consensus 275 -~~~~~~l~~---a~~~--------------e~~~~hp~~~Ai~~~~~~~~~~~~~--~-~-~~~~~~------~~gi~~ 326 (556)
T TIGR01525 275 -ISEEELLAL---AAAL--------------EQSSSHPLARAIVRYAKKRGLELPK--Q-E-DVEEVP------GKGVEA 326 (556)
T ss_pred -ccHHHHHHH---HHHH--------------hccCCChHHHHHHHHHHhcCCCccc--c-c-CeeEec------CCeEEE
Confidence 001222221 1110 1235799999999999887654321 0 0 011111 112222
Q ss_pred eecC-CeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEe
Q 042091 552 KRIN-SEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLA 630 (1023)
Q Consensus 552 ~~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG 630 (1023)
..++ .++ ..|+++.+ + .++. + .+++++.++.++.+|+|++.++ .|.+++|
T Consensus 327 ~~~g~~~~---~lg~~~~~-~-------~~~~----~--~~~~~~~~~~~~~~g~~~~~v~------------~~~~~~g 377 (556)
T TIGR01525 327 TVDGQEEV---RIGNPRLL-E-------LAAE----P--ISASPDLLNEGESQGKTVVFVA------------VDGELLG 377 (556)
T ss_pred EECCeeEE---EEecHHHH-h-------hcCC----C--chhhHHHHHHHhhCCcEEEEEE------------ECCEEEE
Confidence 2222 122 23666544 1 0110 0 1223455667888999999998 5679999
Q ss_pred eeeccCCCcccHHHHHHHHHhCC-CEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhc
Q 042091 631 IVGIKDPCRPGVKDAVKLCRDAG-VKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEI 709 (1023)
Q Consensus 631 ~i~~~D~lr~~~~~~I~~l~~aG-i~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~ 709 (1023)
.+.++|++|||++++++.|+++| +++.|+|||+..++.++++++|+.
T Consensus 378 ~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~-------------------------------- 425 (556)
T TIGR01525 378 VIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID-------------------------------- 425 (556)
T ss_pred EEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--------------------------------
Confidence 99999999999999999999999 999999999999999999999996
Q ss_pred eEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHH
Q 042091 710 TVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRS 789 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~ 789 (1023)
.+|+++.|++|.++++.+++.++.|+|+|||.||++|+++||+|+++| ++++.+++.||+++.+++++.+.+++++||+
T Consensus 426 ~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~ 504 (556)
T TIGR01525 426 EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRK 504 (556)
T ss_pred eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHH
Confidence 368899999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 042091 790 VFANIQKFIQFQLTVNVAALLINVVAA 816 (1023)
Q Consensus 790 ~~~~i~~~i~~~l~~nv~~i~~~~~~~ 816 (1023)
+++||++++.|++.||++.+++++.+.
T Consensus 505 ~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 505 TRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988776554
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-74 Score=687.71 Aligned_cols=505 Identities=27% Similarity=0.385 Sum_probs=425.6
Q ss_pred HHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccce
Q 042091 151 ILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVV 230 (1023)
Q Consensus 151 ~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv 230 (1023)
++.++++++++.+ .|+++..+++++++..+++.++++++++..++|.+..+ .+++|+|||+++++++++|+
T Consensus 4 l~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~-~~~~v~r~g~~~~i~~~~l~ 74 (536)
T TIGR01512 4 LMALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAP-DTARVLRGGSLEEVAVEELK 74 (536)
T ss_pred HHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCEEEEEEHHHCC
Confidence 3445566666665 68999777777777778999999999999999988765 68999999999999999999
Q ss_pred eccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcc
Q 042091 231 VGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASIS 310 (1023)
Q Consensus 231 ~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 310 (1023)
|||+|.+++||+|||||++++|+. .||||+|||||.|+.|.+++. +|+||.+.+|.++++|++||.+|++|++.+++.
T Consensus 75 ~GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~-v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~ 152 (536)
T TIGR01512 75 VGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDE-VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVE 152 (536)
T ss_pred CCCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCE-EEeeeEECCceEEEEEEEeccccHHHHHHHHHH
Confidence 999999999999999999999975 999999999999999999886 999999999999999999999999999999999
Q ss_pred cCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhh
Q 042091 311 EDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAI 390 (1023)
Q Consensus 311 ~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 390 (1023)
++..+++|+|+.+++++.++.++.+++++++++++.. .+. ....+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------------~~~~~~~~------ 200 (536)
T TIGR01512 153 EAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGL---LKR-----------------------WPFWVYRA------ 200 (536)
T ss_pred HHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc-----------------------cHHHHHHH------
Confidence 8888899999999999999999888877766654421 110 01144455
Q ss_pred hhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCC
Q 042091 391 QVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDD 470 (1023)
Q Consensus 391 ~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~ 470 (1023)
+++++++|||+||+++|+++..+++++.++|+++|+++++|++|++|++|||||||||+|+|+|.+++..
T Consensus 201 -~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~--------- 270 (536)
T TIGR01512 201 -LVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA--------- 270 (536)
T ss_pred -HHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------
Confidence 8999999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred CCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEE
Q 042091 471 SSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVA 550 (1023)
Q Consensus 471 ~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msvi 550 (1023)
+++..+.+. +..+.||+++|+++++.+.+ .+. -.+..| ..++.
T Consensus 271 ---------~~l~~a~~~--------------e~~~~hp~~~Ai~~~~~~~~-~~~-------~~~~~~------g~gi~ 313 (536)
T TIGR01512 271 ---------EVLRLAAAA--------------EQASSHPLARAIVDYARKRE-NVE-------SVEEVP------GEGVR 313 (536)
T ss_pred ---------HHHHHHHHH--------------hccCCCcHHHHHHHHHHhcC-CCc-------ceEEec------CCeEE
Confidence 222222111 12357999999999988654 111 112222 22333
Q ss_pred EeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEe
Q 042091 551 VKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLA 630 (1023)
Q Consensus 551 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG 630 (1023)
...++.++. .|+++.+.+. +. ..+..+|.+++.++ .|..++|
T Consensus 314 ~~~~g~~~~---ig~~~~~~~~--------~~---------------~~~~~~~~~~~~v~------------~~~~~~g 355 (536)
T TIGR01512 314 AVVDGGEVR---IGNPRSLEAA--------VG---------------ARPESAGKTIVHVA------------RDGTYLG 355 (536)
T ss_pred EEECCeEEE---EcCHHHHhhc--------CC---------------cchhhCCCeEEEEE------------ECCEEEE
Confidence 333444433 4877654221 00 03445677776666 6789999
Q ss_pred eeeccCCCcccHHHHHHHHHhCCC-EEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhc
Q 042091 631 IVGIKDPCRPGVKDAVKLCRDAGV-KVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEI 709 (1023)
Q Consensus 631 ~i~~~D~lr~~~~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~ 709 (1023)
.+.++|++|||++++|+.|+++|+ ++.|+|||+..++..+++++|+..
T Consensus 356 ~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~------------------------------- 404 (536)
T TIGR01512 356 YILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE------------------------------- 404 (536)
T ss_pred EEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-------------------------------
Confidence 999999999999999999999999 999999999999999999999963
Q ss_pred eEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHH
Q 042091 710 TVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRS 789 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~ 789 (1023)
+|+++.|++|.++++.++++++.|+|+|||.||++|+++||+|++||.++++.++++||+++.++++..+.+++++||+
T Consensus 405 -~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~ 483 (536)
T TIGR01512 405 -VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARR 483 (536)
T ss_pred -hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999999966899999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHH
Q 042091 790 VFANIQKFIQFQLTVNVAALLINVVA 815 (1023)
Q Consensus 790 ~~~~i~~~i~~~l~~nv~~i~~~~~~ 815 (1023)
+++|+++|+.|++.||++.+++++++
T Consensus 484 ~~~~i~~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 484 TRRIVKQNVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998887765
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-73 Score=716.38 Aligned_cols=510 Identities=25% Similarity=0.342 Sum_probs=428.0
Q ss_pred cccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEE
Q 042091 171 EGWYDGASIAFAVFLV-IVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVL 249 (1023)
Q Consensus 171 ~~~~~~~~i~~~lll~-~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgil 249 (1023)
+.||+.+++++++++. -+++...+.+..+..++|.+..+ ..++|+|||++++|+.++|+|||+|.|++||+|||||+|
T Consensus 283 ~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p-~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v 361 (834)
T PRK10671 283 HLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTP-PTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEI 361 (834)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEE
Confidence 4588876666555444 47888888888888899988776 689999999999999999999999999999999999999
Q ss_pred EeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHH
Q 042091 250 VTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATF 329 (1023)
Q Consensus 250 l~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~ 329 (1023)
++|+ ..||||+|||||.|+.|.+++. +|+||.+.+|.++++|+++|.+|.+|++.+++++++..++|+|+.+++++.+
T Consensus 362 ~~g~-~~vdeS~lTGEs~pv~k~~gd~-V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~ 439 (834)
T PRK10671 362 TQGE-AWLDEAMLTGEPIPQQKGEGDS-VHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV 439 (834)
T ss_pred EEce-EEEeehhhcCCCCCEecCCCCE-EEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 9997 4999999999999999999986 9999999999999999999999999999999999888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHH
Q 042091 330 IGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTL 409 (1023)
Q Consensus 330 i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~ 409 (1023)
++++.++++++++++|++ .+.. . .+...+..+ +++++++|||+|++++|+
T Consensus 440 ~v~~v~~~a~~~~~~~~~---~~~~--~------------------~~~~~~~~a-------~~vlv~acPcaL~la~p~ 489 (834)
T PRK10671 440 FVPVVVVIALVSAAIWYF---FGPA--P------------------QIVYTLVIA-------TTVLIIACPCALGLATPM 489 (834)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCc--h------------------HHHHHHHHH-------HHHHHHhcccchhhhHHH
Confidence 999888888877776532 1110 0 133445566 999999999999999999
Q ss_pred HHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHcc
Q 042091 410 TLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQN 489 (1023)
Q Consensus 410 ~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~ 489 (1023)
++..++.+++++|+++|+++++|+++++|++|||||||||+|+|+|.++...+. ..+ .+++..+.+.+
T Consensus 490 a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~----------~~~--~~~l~~a~~~e 557 (834)
T PRK10671 490 SIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG----------VDE--AQALRLAAALE 557 (834)
T ss_pred HHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC----------CCH--HHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999998764321 111 12222222211
Q ss_pred CCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHH
Q 042091 490 TTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMI 569 (1023)
Q Consensus 490 ~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~i 569 (1023)
..+.||+++|+++++..... .. ..+|+... ..++....++.. +++|+++.+
T Consensus 558 --------------~~s~hp~a~Ai~~~~~~~~~--~~---------~~~~~~~~-g~Gv~~~~~g~~---~~~G~~~~~ 608 (834)
T PRK10671 558 --------------QGSSHPLARAILDKAGDMTL--PQ---------VNGFRTLR-GLGVSGEAEGHA---LLLGNQALL 608 (834)
T ss_pred --------------CCCCCHHHHHHHHHHhhCCC--CC---------cccceEec-ceEEEEEECCEE---EEEeCHHHH
Confidence 23579999999998764321 11 12233222 234443333332 356999876
Q ss_pred HHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHH
Q 042091 570 LASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLC 649 (1023)
Q Consensus 570 l~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l 649 (1023)
.+.. ++ .+.+.+.++.++.+|.+++.++ .|..++|++++.|++||+++++|+.|
T Consensus 609 ~~~~------------~~--~~~~~~~~~~~~~~g~~~v~va------------~~~~~~g~~~l~d~~r~~a~~~i~~L 662 (834)
T PRK10671 609 NEQQ------------VD--TKALEAEITAQASQGATPVLLA------------VDGKAAALLAIRDPLRSDSVAALQRL 662 (834)
T ss_pred HHcC------------CC--hHHHHHHHHHHHhCCCeEEEEE------------ECCEEEEEEEccCcchhhHHHHHHHH
Confidence 4321 11 1345666778889999999998 46689999999999999999999999
Q ss_pred HhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHh
Q 042091 650 RDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRK 729 (1023)
Q Consensus 650 ~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~ 729 (1023)
++.|+++.|+|||+..++.++++++||. .+++++.|++|.++++.+++
T Consensus 663 ~~~gi~v~~~Tgd~~~~a~~ia~~lgi~--------------------------------~~~~~~~p~~K~~~i~~l~~ 710 (834)
T PRK10671 663 HKAGYRLVMLTGDNPTTANAIAKEAGID--------------------------------EVIAGVLPDGKAEAIKRLQS 710 (834)
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHHcCCC--------------------------------EEEeCCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999996 36889999999999999999
Q ss_pred CCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 042091 730 GGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAAL 809 (1023)
Q Consensus 730 ~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i 809 (1023)
+++.|+|+|||.||+||+++||+||+|| +|++.++++||++++++++..+..++++||+++++|++|+.|++.||++.+
T Consensus 711 ~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i 789 (834)
T PRK10671 711 QGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGI 789 (834)
T ss_pred cCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 899999999999999999999999999999999999999999999999998
Q ss_pred HHHH
Q 042091 810 LINV 813 (1023)
Q Consensus 810 ~~~~ 813 (1023)
++++
T Consensus 790 ~~a~ 793 (834)
T PRK10671 790 PIAA 793 (834)
T ss_pred HHHH
Confidence 8765
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-60 Score=516.48 Aligned_cols=499 Identities=27% Similarity=0.405 Sum_probs=391.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCceEEEEEC-CEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccc
Q 042091 184 FLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRG-GKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSM 262 (1023)
Q Consensus 184 ll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~-g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~L 262 (1023)
++..+-+++.|-|-+.+...|.+.+....++++++ |..+.+++.+|+.||+|.++.||+||+||.+++|.. +||||.+
T Consensus 77 lFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAI 155 (681)
T COG2216 77 LFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAI 155 (681)
T ss_pred HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhc
Confidence 33345567777777777777776655556777765 899999999999999999999999999999999986 9999999
Q ss_pred cCCCceeccCCC---CCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 042091 263 TGESKIVRKDHK---TPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAF 339 (1023)
Q Consensus 263 TGES~pv~K~~~---~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~ 339 (1023)
||||.||-|.+| +. +-.||.+++...++++++...+|.+.++..+++.++.++||-+..++ +...++.+.+
T Consensus 156 TGESaPViresGgD~ss-VtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~-----iLL~~LTliF 229 (681)
T COG2216 156 TGESAPVIRESGGDFSS-VTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALT-----ILLSGLTLIF 229 (681)
T ss_pred cCCCcceeeccCCCccc-ccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHH-----HHHHHHHHHH
Confidence 999999999987 44 89999999999999999999999999999999999999999554443 3333333222
Q ss_pred HHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHH
Q 042091 340 LVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMM 419 (1023)
Q Consensus 340 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~ 419 (1023)
++..+.+.. +. ++ ..+. .-+..+.++++|..+|-.+.-.++..=-.+|.|+.
T Consensus 230 L~~~~Tl~p-~a-~y---------~~g~-----------------~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~ 281 (681)
T COG2216 230 LLAVATLYP-FA-IY---------SGGG-----------------AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVT 281 (681)
T ss_pred HHHHHhhhh-HH-HH---------cCCC-----------------CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhh
Confidence 222221111 11 10 0000 00111227889999998887666655567999999
Q ss_pred hCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCC
Q 042091 420 ADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKD 499 (1023)
Q Consensus 420 ~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~ 499 (1023)
+.|++-++..++|..|.+|++..|||||+|.|+-.-.+++..+.. +. .++...+.. + +++
T Consensus 282 ~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv----------~~--~~la~aa~l-s---Sl~---- 341 (681)
T COG2216 282 QFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGV----------SE--EELADAAQL-A---SLA---- 341 (681)
T ss_pred hhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCC----------CH--HHHHHHHHH-h---hhc----
Confidence 999999999999999999999999999999998777666653321 11 122222221 1 121
Q ss_pred CCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhcccccc
Q 042091 500 GEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDT 579 (1023)
Q Consensus 500 ~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~ 579 (1023)
-..|..+.+++.|++.+...+...... .....||+.+.+.+|+-.. ++ +-.-|||.+.+.+..+. .
T Consensus 342 ------DeTpEGrSIV~LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~---~ 407 (681)
T COG2216 342 ------DETPEGRSIVELAKKLGIELREDDLQS-HAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRE---R 407 (681)
T ss_pred ------cCCCCcccHHHHHHHhccCCCcccccc-cceeeecceecccccccCC--CC--ceeecccHHHHHHHHHh---c
Confidence 135777889999999886554432211 3567899999887777543 33 34569999999987653 1
Q ss_pred CCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEE
Q 042091 580 DGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMV 659 (1023)
Q Consensus 580 ~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~ml 659 (1023)
+|. . + ++++...++-++.|-..++++ .|-.++|++.++|-++||.+|-+.+||+.|||.+|+
T Consensus 408 ~g~-~--p---~~l~~~~~~vs~~GGTPL~V~------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~ 469 (681)
T COG2216 408 GGH-I--P---EDLDAAVDEVSRLGGTPLVVV------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMI 469 (681)
T ss_pred CCC-C--C---HHHHHHHHHHHhcCCCceEEE------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEE
Confidence 221 1 1 678888899999999999998 778999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcC
Q 042091 660 TGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGD 739 (1023)
Q Consensus 660 TGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGD 739 (1023)
||||+.||.+||++.|++. ..|.++||+|.++++.-|.+|+.|+|+||
T Consensus 470 TGDN~~TAa~IA~EAGVDd--------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGD 517 (681)
T COG2216 470 TGDNPLTAAAIAAEAGVDD--------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGD 517 (681)
T ss_pred eCCCHHHHHHHHHHhCchh--------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCC
Confidence 9999999999999999984 36899999999999999999999999999
Q ss_pred CccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHH
Q 042091 740 GTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQL 802 (1023)
Q Consensus 740 G~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l 802 (1023)
|+||+|||.+||||+||. +||+.|||++.++=+|.|...+.++++.|+...-.=-..-.|++
T Consensus 518 GTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSI 579 (681)
T COG2216 518 GTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSI 579 (681)
T ss_pred CCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeeh
Confidence 999999999999999999 99999999999999999999999999999987654333333443
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=304.24 Aligned_cols=225 Identities=32% Similarity=0.545 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEe
Q 042091 179 IAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAID 258 (1023)
Q Consensus 179 i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VD 258 (1023)
+++++++..+++.++++++++..+++++..++..++|+|||++++++++||+|||+|.|++||++||||++++...+.||
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd 81 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccc
Confidence 34556666788999999999999999887765459999999999999999999999999999999999999993347999
Q ss_pred eccccCCCceeccCC----CCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHH
Q 042091 259 ESSMTGESKIVRKDH----KTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVG 334 (1023)
Q Consensus 259 ES~LTGES~pv~K~~----~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~ 334 (1023)
||.+|||+.|+.|.+ .++++|+||.+.+|.+.++|++||.+|..|++.+...+.+.+++++++.+++++.++.++.
T Consensus 82 ~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T PF00122_consen 82 ESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIII 161 (230)
T ss_dssp CHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcc
Confidence 999999999999992 3457999999999999999999999999999999998888888999999999999998887
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHH
Q 042091 335 LAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYS 414 (1023)
Q Consensus 335 l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~ 414 (1023)
++++++++++++ +.... . ++...+..+ +++++++|||+||+++++++.++
T Consensus 162 ~~~~~~~~~~~~---~~~~~------~--------------~~~~~~~~~-------i~~l~~~~P~~l~~~~~~~~~~~ 211 (230)
T PF00122_consen 162 LAIAILVFIIWF---FNDSG------I--------------SFFKSFLFA-------ISLLIVLIPCALPLALPLSLAIA 211 (230)
T ss_dssp HHHHHHHHHHCH---TGSTT------C--------------HCCHHHHHH-------HHHHHHHS-TTHHHHHHHHHHHH
T ss_pred cccchhhhccce---ecccc------c--------------ccccccccc-------cceeeeecccceeehHHHHHHHH
Confidence 777766654332 11000 0 134455666 89999999999999999999999
Q ss_pred HHHHHhCCcccccchhhhh
Q 042091 415 MRKMMADKALVRRLSACET 433 (1023)
Q Consensus 415 ~~~l~~~~ilvr~~~~~E~ 433 (1023)
+++|.++|+++|+++++|+
T Consensus 212 ~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 212 ARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHTTEEESSTTHHHH
T ss_pred HHHHHHCCEEEeCcccccC
Confidence 9999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-22 Score=222.41 Aligned_cols=435 Identities=11% Similarity=0.119 Sum_probs=284.4
Q ss_pred CchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhcccc--------------------------
Q 042091 564 GAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFIL-------------------------- 616 (1023)
Q Consensus 564 Ga~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~-------------------------- 616 (1023)
|-.+...+.|+.+++.. .+.|++... +++++.+.+....|+ |+++|||+..
T Consensus 698 g~ad~~~eACTdfWdGa-di~PlSg~dkkkV~DFY~RaclsG~-C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDGA-DIIPLSGRDKKKVKDFYLRACLSGH-CLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCCc-eeeecCcchHHHHHHHHHHHhhccc-chheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 66678889999999743 457888776 788888888788885 9999999870
Q ss_pred --------------cc-C---------------CCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHH
Q 042091 617 --------------DK-W---------------TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQT 666 (1023)
Q Consensus 617 --------------~~-~---------------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t 666 (1023)
+. + +..-.+.+|.|++..+.+.|++....|+.|.++.||.+.+|-++...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00 0 01124678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCC---------------------------------------CCCeeeechh-------hhccC--
Q 042091 667 AKAIALECGILGSDAEA---------------------------------------NDPNIIEGKV-------FRALS-- 698 (1023)
Q Consensus 667 a~~ia~~~gi~~~~~~~---------------------------------------~~~~vi~g~~-------~~~l~-- 698 (1023)
.+-+|.++||...|++. .....++-++ ++.++
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999999988730 0011111111 00000
Q ss_pred -----------------------HHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccC--HHHhhhCCcc
Q 042091 699 -----------------------DKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTND--APALHEADIG 753 (1023)
Q Consensus 699 -----------------------~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND--~~aL~~Advg 753 (1023)
-++++++..-+..|..++|+.-.++++.+|++|++++++|...|- ...+-+|||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 122333333446899999999999999999999999999999884 4456889999
Q ss_pred EEecCC------------CCH------------------HHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHH
Q 042091 754 LAMGIQ------------GTE------------------VAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLT 803 (1023)
Q Consensus 754 Iamg~~------------g~~------------------~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 803 (1023)
||+-.- ++. ...-++|+.+.....-++..+|+.+|.....+|+++.|.++
T Consensus 1016 ialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq 1095 (1354)
T KOG4383|consen 1016 IALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQ 1095 (1354)
T ss_pred EEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 997310 111 11234566666666778889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHH-hccCCCCccccccCCCCCCCCC--cchHH-----HHHHH
Q 042091 804 VNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALA-LATEPPTDHLMHRLPVGRKEPL--ITNIM-----WRNLI 875 (1023)
Q Consensus 804 ~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~la-l~~e~~~~~~m~~~P~~~~~~~--~~~~~-----~~~~~ 875 (1023)
..+...++.+++.++..+..++..+++|...+-..+..+. |-..+|...+|-+...++...+ .++.. .+.+.
T Consensus 1096 ~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fllcFilkFs 1175 (1354)
T KOG4383|consen 1096 AQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFLLCFILKFS 1175 (1354)
T ss_pred HHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEeeccCChhhcccHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999998855444443 3345555555554332221211 11111 11111
Q ss_pred HHHHHHHHHHHHH-HHhhhcccc---------cccccc----------ccccccchhHHHHHHHHHHHHhhcccCCCCcc
Q 042091 876 VQALYQVTVLLVL-NFKGTSILH---------LEGERR----------QHASDVKNTMIFNAFVLSQIFNEFNARKPDEI 935 (1023)
Q Consensus 876 ~~~~~~~~~~~~l-~~~~~~~~~---------~~~~~~----------~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~ 935 (1023)
..+.+..+++.++ +-+.....+ ..++.. .+....++...-..++...+|..+...+..+.
T Consensus 1176 ls~ssclIcFgf~L~afcd~~~d~n~~nC~~~m~~S~ddqa~a~FedfangL~saQkl~aa~iilH~ifiqIThih~tkp 1255 (1354)
T KOG4383|consen 1176 LSASSCLICFGFLLMAFCDLMCDFNDINCLFNMDGSADDQALAEFEDFANGLGSAQKLLAAEIILHIIFIQITHIHCTKP 1255 (1354)
T ss_pred hhHHHHHHHHHHHHHHhhhhhccccccceeeccCCCcCcccchhHHHHHhhhhhHHHHHHHHHHHHhheeEEEEEEEecc
Confidence 1222222211111 111111111 111100 01111223333444566667777766666677
Q ss_pred ceeecCcchHHHHHHHHHHHHHHHHH----HHHH-----HHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhcc
Q 042091 936 NVFTGVTKNYLFMGIIGITCVLQIII----IEFL-----GKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIP 1000 (1023)
Q Consensus 936 ~~~~~~~~n~~~~~~~~~~~~~~~~~----v~~~-----~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~ 1000 (1023)
.+|+...+|.||-..+-..+.-++++ .+.. +.-|+....+..-|++.+++..++.+.+|++|.-.
T Consensus 1256 l~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~~VHfgldd~pLL~~~igcisi~iiVitNEiiKihe 1329 (1354)
T KOG4383|consen 1256 LSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDRGVHFGLDDFPLLPLGIGCISICIIVITNEIIKIHE 1329 (1354)
T ss_pred hhhhcccchheeecccceeehhhHHHHHHhhhhhhccccceeeccccchhHHHHHHHHheeeeeehhhHHHHHH
Confidence 78887777766543322211112111 2222 23456666677789988888888888899999743
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-24 Score=221.62 Aligned_cols=179 Identities=34% Similarity=0.547 Sum_probs=144.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Q 042091 821 DVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEG 900 (1023)
Q Consensus 821 ~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 900 (1023)
|.|+++.|+||+|+++|.+|+++++.|||++++|+|||++++++++++.+|+.++.+|+++++++++.++.+.+.++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999988888777665444332
Q ss_pred cccccccccchhHHHHHHHHHHHHhhcccCCCCccce-eecCcchHHHHHHHHHHHHHHHHHH--HHHHHcccCCCCCHH
Q 042091 901 ERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINV-FTGVTKNYLFMGIIGITCVLQIIII--EFLGKFTKTVKLDWK 977 (1023)
Q Consensus 901 ~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~ 977 (1023)
.........++|++|++++++|+++.+++|+.++..+ |.+.++|++++.++++++++|++++ |+++.+|++.++++.
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~ 160 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPLW 160 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----THH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCHH
Confidence 1111234568999999999999999999999664333 3588899999999999998887774 569999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc
Q 042091 978 LWLASIGIGLFSWPLAVLGKMI 999 (1023)
Q Consensus 978 ~w~~~~~~~~~~~~~~~~~k~~ 999 (1023)
+|+++++++++.++++|++|++
T Consensus 161 ~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 161 QWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.4e-24 Score=224.55 Aligned_cols=211 Identities=33% Similarity=0.462 Sum_probs=145.7
Q ss_pred ceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHH
Q 042091 437 ATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILS 516 (1023)
Q Consensus 437 v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~ 516 (1023)
|++||||||||||+|+|.+ .. + -......++ ... ...+.||+..++..
T Consensus 1 i~~i~fDktGTLt~~~~~v--~~-----~--------~~~~~~~~~-~~~----------------~~~s~~p~~~~~~~ 48 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV--AP-----P--------SNEAALAIA-AAL----------------EQGSEHPIGKAIVE 48 (215)
T ss_dssp ESEEEEECCTTTBESHHEE--ES-----C--------SHHHHHHHH-HHH----------------HCTSTSHHHHHHHH
T ss_pred CeEEEEecCCCcccCeEEE--Ee-----c--------cHHHHHHHH-HHh----------------hhcCCCcchhhhhh
Confidence 6899999999999999999 00 0 011222222 111 12357999999999
Q ss_pred HHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHH
Q 042091 517 WAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAA 596 (1023)
Q Consensus 517 ~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~ 596 (1023)
++...... . ...-...++ .+ ++.....+. + +|.++.+...+.... .....
T Consensus 49 ~~~~~~~~-~----~~~~~~~~~-----~~-~~~~~~~~~----~-~g~~~~~~~~~~~~~--------------~~~~~ 98 (215)
T PF00702_consen 49 FAKNHQWS-K----SLESFSEFI-----GR-GISGDVDGI----Y-LGSPEWIHELGIRVI--------------SPDLV 98 (215)
T ss_dssp HHHHHHHH-S----CCEEEEEET-----TT-EEEEEEHCH----E-EHHHHHHHHHHHHHH--------------HHHHH
T ss_pred hhhhccch-h----hhhhheeee-----ec-ccccccccc----c-cccchhhhhcccccc--------------ccchh
Confidence 88752211 0 001111111 11 111111111 1 288887766554310 01111
Q ss_pred HHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCC
Q 042091 597 VDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGI 676 (1023)
Q Consensus 597 ~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi 676 (1023)
......++...+.++ .+..++|.+.+.|++||+++++|+.|+++|++++|+|||+..++.++++++||
T Consensus 99 ~~~~~~~~~~~~~~~------------~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 99 EEIQESQGRTVIVLA------------VNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp HHHHHHHHHHCEEEE------------ESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTS
T ss_pred hhHHHhhCCccccee------------ecCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccc
Confidence 122234454455554 37899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC--CHhhH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCC
Q 042091 677 LGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS--SPNDK--LLLVQALRKGGDVVAVTGDGTNDAPALHEAD 751 (1023)
Q Consensus 677 ~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~--~P~~K--~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Ad 751 (1023)
.. ..+|+++ +|++| .++++.||.+++.|+|+|||.||++|+++||
T Consensus 167 ~~------------------------------~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 167 FD------------------------------SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp CS------------------------------EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cc------------------------------ccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 53 1489999 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-13 Score=125.70 Aligned_cols=126 Identities=23% Similarity=0.321 Sum_probs=108.6
Q ss_pred cEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHH
Q 042091 626 LILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKV 705 (1023)
Q Consensus 626 l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~ 705 (1023)
....+.++---.+=++++++|++|++. ++|++.|||...+....|+-.|+...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 346677777778889999999999999 99999999999999999999998753
Q ss_pred HhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCC--CCHHHHhccCccccCCChhHHHHH
Q 042091 706 AQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQ--GTEVAKENSDIIILDDNFASVVKV 783 (1023)
Q Consensus 706 ~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~--g~~~ak~~adiil~~~~~~~i~~~ 783 (1023)
.+|+...|+.|.++++.|++.++.|.|+|||.||.+||++||+||..-.+ ..+-+.++||+++. +...++++
T Consensus 72 ----rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl 145 (152)
T COG4087 72 ----RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDL 145 (152)
T ss_pred ----eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHH
Confidence 58999999999999999999999999999999999999999999976422 23446689999997 55556555
Q ss_pred H
Q 042091 784 V 784 (1023)
Q Consensus 784 i 784 (1023)
+
T Consensus 146 ~ 146 (152)
T COG4087 146 L 146 (152)
T ss_pred h
Confidence 4
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.2e-14 Score=127.18 Aligned_cols=73 Identities=41% Similarity=0.663 Sum_probs=64.3
Q ss_pred eeecCChHHHHHHHHHHHcC--CChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccc
Q 042091 503 VEVSGSPTEKAILSWAVKLG--MKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKY 576 (1023)
Q Consensus 503 ~~~~g~p~e~All~~a~~~g--~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~ 576 (1023)
.+..|+|+|.||+.++.+.| .+....+..+++++++||+|+||+|+|+++ +++.+.+++|||||.|+++|+++
T Consensus 17 ~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 17 EEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred ccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCCC
Confidence 34899999999999999984 567778889999999999999999999998 44467779999999999999863
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.5e-09 Score=119.69 Aligned_cols=67 Identities=25% Similarity=0.320 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 718 NDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 718 ~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.+|..-++.+.++ | +.|+++|||.||.+||+.|++|+||+ ++.+.+|+.||+|..+++-.++..+++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 3677777777654 2 56999999999999999999999999 999999999999999889999998886
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1e-09 Score=117.92 Aligned_cols=148 Identities=22% Similarity=0.232 Sum_probs=106.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeec---hhhhc--c--------------
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEG---KVFRA--L-------------- 697 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g---~~~~~--l-------------- 697 (1023)
++.+.+.++|++++++|+++++.||+....+..+++++|+..+....+++.+... +.+.. +
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 3788999999999999999999999999999999999998754333333333321 11000 0
Q ss_pred -------------------------CHHHHHHHHhhc----eEe-----ccCCH--hhHHHHHHHHHhC----CCEEEEE
Q 042091 698 -------------------------SDKEREKVAQEI----TVM-----GRSSP--NDKLLLVQALRKG----GDVVAVT 737 (1023)
Q Consensus 698 -------------------------~~~~~~~~~~~~----~v~-----ar~~P--~~K~~iV~~lq~~----g~~V~~i 737 (1023)
..++..+.+.+. .+. ....| .+|...++.+.++ ...++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 011122222211 111 12222 2477777777664 3469999
Q ss_pred cCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 738 GDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 738 GDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
||+.||.+|++.|++|+||+ ++.+.+|+.||++..+++-.++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999 999999999999999889999998886
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2e-09 Score=118.95 Aligned_cols=157 Identities=15% Similarity=0.156 Sum_probs=107.6
Q ss_pred CcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee--chhh--------
Q 042091 625 ELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE--GKVF-------- 694 (1023)
Q Consensus 625 ~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~--g~~~-------- 694 (1023)
|.|++. -...+.+.++++|++++++|+++++.||++...+..+.+++|+.......+++.+.+ |+.+
T Consensus 10 DGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 445553 123588999999999999999999999999999999999999864322111111110 0000
Q ss_pred -------------------------------------------------hcc------------CHHHHHH---HHh---
Q 042091 695 -------------------------------------------------RAL------------SDKEREK---VAQ--- 707 (1023)
Q Consensus 695 -------------------------------------------------~~l------------~~~~~~~---~~~--- 707 (1023)
..+ .++++++ .+.
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~ 166 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEAL 166 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHh
Confidence 000 0111111 111
Q ss_pred --hceEe------ccCCH--hhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCc--c
Q 042091 708 --EITVM------GRSSP--NDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI--I 771 (1023)
Q Consensus 708 --~~~v~------ar~~P--~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adi--i 771 (1023)
.+.+. ...+| ..|..-++.+.+. | +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.||+ +
T Consensus 167 ~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v 245 (272)
T PRK15126 167 GERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPV 245 (272)
T ss_pred cCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCee
Confidence 01111 11222 2688888888765 3 56999999999999999999999999 999999999996 6
Q ss_pred ccCCChhHHHHHHH
Q 042091 772 ILDDNFASVVKVVR 785 (1023)
Q Consensus 772 l~~~~~~~i~~~i~ 785 (1023)
+.+++-+++..+|+
T Consensus 246 ~~~n~edGva~~l~ 259 (272)
T PRK15126 246 IGHCRNQAVSHYLT 259 (272)
T ss_pred cCCCcchHHHHHHH
Confidence 77888889988885
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.5e-10 Score=96.14 Aligned_cols=68 Identities=26% Similarity=0.526 Sum_probs=63.0
Q ss_pred hcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 042091 90 QVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIAS 159 (1023)
Q Consensus 90 ~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails 159 (1023)
|...++++++.|+++..+||+++ |+.+|+++||+|.++.++.+++|+.++++|.++++++|++++++|
T Consensus 2 ~~~~~~~v~~~l~t~~~~GLs~~--ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 2 HQLSVEEVLKRLNTSSSQGLSSE--EVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TTSSHHHHHHHHTTBTSSBBTHH--HHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCCCCCCCHH--HHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 34458999999999999999987 999999999999999889999999999999999999999999886
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.2e-09 Score=116.12 Aligned_cols=146 Identities=23% Similarity=0.244 Sum_probs=105.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhc--------c-----------
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRA--------L----------- 697 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~--------l----------- 697 (1023)
++.+.+.++|++|+++|+++++.||++...+..+++++++..+....+++.+...+.-.. +
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488999999999999999999999999999999999999875443333333333111000 0
Q ss_pred -------------------CHHHHHHHHhhc--eEe-----cc--CCHhhHHHHHHHHHhC----CCEEEEEcCCccCHH
Q 042091 698 -------------------SDKEREKVAQEI--TVM-----GR--SSPNDKLLLVQALRKG----GDVVAVTGDGTNDAP 745 (1023)
Q Consensus 698 -------------------~~~~~~~~~~~~--~v~-----ar--~~P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~ 745 (1023)
..+++.+.+.+. .+. .. ....+|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 001111111111 111 01 2245888888888764 235899999999999
Q ss_pred HhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHH
Q 042091 746 ALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKV 783 (1023)
Q Consensus 746 aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~ 783 (1023)
|++.|++|+||+ ++.+.+|+.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999987777777654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.1e-09 Score=116.94 Aligned_cols=148 Identities=22% Similarity=0.221 Sum_probs=102.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee--chhhh--ccC--------------
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE--GKVFR--ALS-------------- 698 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~--g~~~~--~l~-------------- 698 (1023)
.+.+.+.++|++++++|+++++.||+....+..+.+++|+.......+++.+.+ |+.+. .++
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~~ 98 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHDN 98 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhccc
Confidence 588899999999999999999999999999999999999864322212222211 11000 000
Q ss_pred -------------------------------------------------------HHHHHH---HHh-----hceEe---
Q 042091 699 -------------------------------------------------------DKEREK---VAQ-----EITVM--- 712 (1023)
Q Consensus 699 -------------------------------------------------------~~~~~~---~~~-----~~~v~--- 712 (1023)
.++..+ .+. .+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~ 178 (266)
T PRK10976 99 PDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFST 178 (266)
T ss_pred CCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEeC
Confidence 011110 000 01110
Q ss_pred ---ccCCH--hhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccC--ccccCCChhHHH
Q 042091 713 ---GRSSP--NDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSD--IIILDDNFASVV 781 (1023)
Q Consensus 713 ---ar~~P--~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~ad--iil~~~~~~~i~ 781 (1023)
....| .+|..-++.+.++ | +.|+++|||.||.+||+.|+.|+||+ ++.+.+|+.|| .++.+++-+++.
T Consensus 179 ~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa 257 (266)
T PRK10976 179 LTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVP 257 (266)
T ss_pred CceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHH
Confidence 01112 2577777777654 2 56999999999999999999999999 99999999988 677788888998
Q ss_pred HHHH
Q 042091 782 KVVR 785 (1023)
Q Consensus 782 ~~i~ 785 (1023)
.+++
T Consensus 258 ~~l~ 261 (266)
T PRK10976 258 HYLR 261 (266)
T ss_pred HHHH
Confidence 8885
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.6e-09 Score=115.43 Aligned_cols=148 Identities=30% Similarity=0.320 Sum_probs=107.7
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhh-----------------------
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVF----------------------- 694 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~----------------------- 694 (1023)
+.+.++++|+++++.|+++.+.||+....+..+.+++|+.......+++.+....+.
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 899999999999999999999999999999999999999863322111111111000
Q ss_pred -------------------------------------h--------c--cCHH---HHHHHHh-----hceEeccCCH--
Q 042091 695 -------------------------------------R--------A--LSDK---EREKVAQ-----EITVMGRSSP-- 717 (1023)
Q Consensus 695 -------------------------------------~--------~--l~~~---~~~~~~~-----~~~v~ar~~P-- 717 (1023)
. . ...+ +..+.+. ....+.+..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0 0 0011 1111111 1122222222
Q ss_pred -------hhHHHHHHHHHhC-CC---EEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 718 -------NDKLLLVQALRKG-GD---VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 718 -------~~K~~iV~~lq~~-g~---~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
.+|...++.+.++ |- .|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++...++-.++..++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 4898888888774 43 4999999999999999999999999 9999999999999899999999999874
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.97 E-value=4e-09 Score=110.49 Aligned_cols=125 Identities=15% Similarity=0.084 Sum_probs=99.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCee------eechhhhccCHHHHHHHHhhce
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNI------IEGKVFRALSDKEREKVAQEIT 710 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~v------i~g~~~~~l~~~~~~~~~~~~~ 710 (1023)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..... ..+. ++|..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~a---n~l~~~~~g~~tG~~----------------- 126 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLC---HKLEIDDSDRVVGYQ----------------- 126 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhc---eeeEEecCCeeECee-----------------
Confidence 68999999999999986 999999999999999999999974211 0111 12221
Q ss_pred EeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHH
Q 042091 711 VMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWG 787 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~g 787 (1023)
...+++|...++.+++.|..+.++|||.||.+|++.||+|+++. +.+..+++||=.-.-.+.+.+..++.++
T Consensus 127 ---~~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 127 ---LRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred ---ecCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 13578999999999888888999999999999999999999995 6777666665544445788888887664
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.91 E-value=7.2e-09 Score=110.98 Aligned_cols=148 Identities=20% Similarity=0.255 Sum_probs=104.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechh----h-hcc--------------
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKV----F-RAL-------------- 697 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~----~-~~l-------------- 697 (1023)
.+.+.+.++|++++++|+++++.||++...+..+++++|+.......+++.+..... + ..+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999754433222332222110 0 000
Q ss_pred ----------------------CHHHHHHHHhhc----eEe-----ccCCH--hhHHHHHHHHHhC----CCEEEEEcCC
Q 042091 698 ----------------------SDKEREKVAQEI----TVM-----GRSSP--NDKLLLVQALRKG----GDVVAVTGDG 740 (1023)
Q Consensus 698 ----------------------~~~~~~~~~~~~----~v~-----ar~~P--~~K~~iV~~lq~~----g~~V~~iGDG 740 (1023)
..+....+..+. .++ ....| .+|...++.+.++ .+.|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 111112222211 111 11122 4788888888664 3569999999
Q ss_pred ccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhH----HHHHHH
Q 042091 741 TNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFAS----VVKVVR 785 (1023)
Q Consensus 741 ~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~----i~~~i~ 785 (1023)
.||.+|++.|++|+||+ ++.+.+|+.||++..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 999999999999998888888 666654
|
catalyze the same reaction as SPP. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=9.3e-09 Score=113.50 Aligned_cols=66 Identities=27% Similarity=0.418 Sum_probs=57.1
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 719 DKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 719 ~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+|...++.+.++ | +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 566666666543 3 46999999999999999999999999 899999999999999989999999886
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=6.4e-09 Score=116.28 Aligned_cols=131 Identities=23% Similarity=0.345 Sum_probs=101.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec-cC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG-RS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a-r~ 715 (1023)
++.|++.+.++.|+++|+++.++||.....+..+.+++|+..... +...+.+|.... .+.. -+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~a--n~lei~dg~ltg--------------~v~g~iv 244 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVA--NELEIMDGKLTG--------------NVLGDIV 244 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEE--eEEEEECCEEEe--------------EecCccC
Confidence 689999999999999999999999999888999999999963110 000111111000 0001 12
Q ss_pred CHhhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 716 SPNDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
..+.|.+.++.+.++ | +.+.++|||.||.+|++.|++|||| ++.+..++.||.++...++.+++.++-
T Consensus 245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 245 DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 346788888888764 3 6799999999999999999999999 788999999999999889999888764
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.4e-08 Score=121.21 Aligned_cols=66 Identities=30% Similarity=0.421 Sum_probs=56.6
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 719 DKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 719 ~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+|..-++.|.+. | +.|+++|||.||.+||+.|++||||| |+.+.+|+.||+|..+++-+++..+|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 455555555543 2 46999999999999999999999999 999999999999999999999999886
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.2e-09 Score=87.74 Aligned_cols=61 Identities=34% Similarity=0.525 Sum_probs=56.2
Q ss_pred hCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 042091 101 LKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALG 163 (1023)
Q Consensus 101 l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~ 163 (1023)
++++...||+++ |+.+|+++||.|+++.++.+++|+.++++|.++++++|+++++++++.+
T Consensus 3 l~~~~~~GLs~~--~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 3 LQTSLESGLSSE--EAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCcccCCCHH--HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 678887899988 8999999999999998888999999999999999999999999998764
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.2e-08 Score=110.76 Aligned_cols=148 Identities=24% Similarity=0.264 Sum_probs=104.2
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCee-e-echhhh--cc--------------
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNI-I-EGKVFR--AL-------------- 697 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~v-i-~g~~~~--~l-------------- 697 (1023)
..+.+.+.+++++++++|+++++.||+....+..+..++++..+....+++.+ . +|+.+. .+
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 45779999999999999999999999999999999999998743221111111 0 000000 00
Q ss_pred -------------------------------------------------------CHHHHHH-------HHhhceEecc-
Q 042091 698 -------------------------------------------------------SDKEREK-------VAQEITVMGR- 714 (1023)
Q Consensus 698 -------------------------------------------------------~~~~~~~-------~~~~~~v~ar- 714 (1023)
..++++. .......+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 1111111 1111111111
Q ss_pred --------CCHhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHH
Q 042091 715 --------SSPNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 715 --------~~P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~ 782 (1023)
....+|...++.+.+. .+.++++||+.||.+||+.|+.|+||+ ++++..|+.||+++...+-.++.+
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 2235898888888764 357999999999999999999999999 999999999999998877788877
Q ss_pred HH
Q 042091 783 VV 784 (1023)
Q Consensus 783 ~i 784 (1023)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 64
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.78 E-value=6.4e-08 Score=105.84 Aligned_cols=147 Identities=16% Similarity=0.103 Sum_probs=100.5
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechh--------h--hccCHHHHHHHH-
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKV--------F--RALSDKEREKVA- 706 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~--------~--~~l~~~~~~~~~- 706 (1023)
..+.+.++|++|+++|++++++||+....+..+.+++|+.......+++.+..... + ..++.+...+++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44568999999999999999999999999999999999875444444544443211 0 001111111100
Q ss_pred ----------------------------------------------------------hh--ceEec-----cC--CHhh
Q 042091 707 ----------------------------------------------------------QE--ITVMG-----RS--SPND 719 (1023)
Q Consensus 707 ----------------------------------------------------------~~--~~v~a-----r~--~P~~ 719 (1023)
.+ +.+.. .. .-..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 00 00000 00 1236
Q ss_pred HHHHHHHHHhC------CCEEEEEcCCccCHHHhhhCCccEEecCCCC---HHHHhc--c-CccccCCChhHHHHHHH
Q 042091 720 KLLLVQALRKG------GDVVAVTGDGTNDAPALHEADIGLAMGIQGT---EVAKEN--S-DIIILDDNFASVVKVVR 785 (1023)
Q Consensus 720 K~~iV~~lq~~------g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~---~~ak~~--a-diil~~~~~~~i~~~i~ 785 (1023)
|...++.+.+. .+.|+++||+.||.+||+.|++|+||+ ++. +..|+. | +++..+++-+++.++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 66666666543 456999999999999999999999999 887 467776 4 58888889999998886
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.9e-08 Score=104.89 Aligned_cols=129 Identities=22% Similarity=0.326 Sum_probs=95.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc-C
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR-S 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar-~ 715 (1023)
+++|++.+.++.|+++|+++.++||.....+..+.+.+|+..... .....++..+.. .+.++ .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~---~~~~~~~~~~~~-------------~~~~~~~ 148 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFA---NRLEVEDGKLTG-------------LVEGPIV 148 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEe---eEEEEECCEEEE-------------EecCccc
Confidence 689999999999999999999999999999999999999974211 000000000000 00111 1
Q ss_pred CHhhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHH
Q 042091 716 SPNDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKV 783 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~ 783 (1023)
.+..|..+++.+.++ + +.+.++||+.||.+|++.|+++++++ +.+..++.||+++.++++..+..+
T Consensus 149 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 149 DASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 233466777665544 2 35889999999999999999999985 678889999999999999887754
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.5e-07 Score=103.84 Aligned_cols=148 Identities=16% Similarity=0.053 Sum_probs=98.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCC-CCCCCCCCeeeechh--------h--hccCHHHHHHH
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILG-SDAEANDPNIIEGKV--------F--RALSDKEREKV 705 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~-~~~~~~~~~vi~g~~--------~--~~l~~~~~~~~ 705 (1023)
.+-+.++++|++|+++|+++++.||+....+..+++++|+.. +....+++.+..... + ..++.+...++
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i 103 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQV 103 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHH
Confidence 355678999999999999999999999999999999999852 333344444443210 0 00111111110
Q ss_pred H-------------------------------------------------------------h--hceEe-----ccCCH
Q 042091 706 A-------------------------------------------------------------Q--EITVM-----GRSSP 717 (1023)
Q Consensus 706 ~-------------------------------------------------------------~--~~~v~-----ar~~P 717 (1023)
+ . .+.+. -...|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~ 183 (271)
T PRK03669 104 LNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLD 183 (271)
T ss_pred HHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEec
Confidence 0 0 00010 01112
Q ss_pred --hhHHHHHHHHHh-------CCCEEEEEcCCccCHHHhhhCCccEEecCCCC-HH-----HHhccCccccCCChhHHHH
Q 042091 718 --NDKLLLVQALRK-------GGDVVAVTGDGTNDAPALHEADIGLAMGIQGT-EV-----AKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 718 --~~K~~iV~~lq~-------~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~-~~-----ak~~adiil~~~~~~~i~~ 782 (1023)
.+|..-++.+.+ ....|+++|||.||.+||+.|++|+||| ++. +. .+..+|++....+-+++.+
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~ 262 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWRE 262 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHH
Confidence 366666666654 2357999999999999999999999999 444 32 3457899999888889888
Q ss_pred HHH
Q 042091 783 VVR 785 (1023)
Q Consensus 783 ~i~ 785 (1023)
+++
T Consensus 263 ~l~ 265 (271)
T PRK03669 263 GLD 265 (271)
T ss_pred HHH
Confidence 886
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.8e-08 Score=101.75 Aligned_cols=118 Identities=25% Similarity=0.280 Sum_probs=91.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC---CCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE---ANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~---~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...... ..+. +++|... -
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-~ltG~v~-----------------g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-KLTGRVV-----------------G 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC-EEeceee-----------------e
Confidence 58999999999999999999999999999999999999999854321 0111 3444432 1
Q ss_pred ccCCHhhHHHHHHHHHhC-CC---EEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCcccc
Q 042091 713 GRSSPNDKLLLVQALRKG-GD---VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIIL 773 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~-g~---~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~ 773 (1023)
-.+..+.|.+.++.+.+. |. .+.++|||.||.|||+.|+.+++++ +....+..|+....
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 234557898888666653 44 5899999999999999999999995 66666666666554
|
|
| >PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases [] | Back alignment and domain information |
|---|
Probab=98.70 E-value=8.2e-09 Score=77.78 Aligned_cols=45 Identities=62% Similarity=0.897 Sum_probs=40.7
Q ss_pred CCCCCcccccCCCCChhhhhhHHHhh-hhhhccccccccccchhhHH
Q 042091 32 VSSDPFDIAQAKHVPVASLKRWRQAS-LVLNASRRFRYTLDLKKEEE 77 (1023)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~w~~~~-~~l~~~~~~~y~~~~~~~~~ 77 (1023)
|++++||++ +||++.++++|||++. .++|+.|||+|++|+++.++
T Consensus 1 yl~~~Fdi~-~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFDIP-AKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccCCC-CCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 467899999 6999999999999997 99999999999999987643
|
This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.70 E-value=5.8e-08 Score=98.26 Aligned_cols=104 Identities=14% Similarity=0.149 Sum_probs=83.3
Q ss_pred HHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHH
Q 042091 644 DAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLL 723 (1023)
Q Consensus 644 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~i 723 (1023)
.+|+.|+++|+++.++|+.+...+..+.+.+|+..... ...-.|+.-..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~------------------------------~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHE------------------------------GIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEe------------------------------cCCCCHHHHHHH
Confidence 57899999999999999999999999999999973110 012234555555
Q ss_pred HHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChh
Q 042091 724 VQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFA 778 (1023)
Q Consensus 724 V~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~ 778 (1023)
++.++-..+.++++||+.||.+|++.|++++||+ ++.+..++.|+++..+++-.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~ 144 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGH 144 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCC
Confidence 5555444467999999999999999999999999 99999999999998755443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.5e-07 Score=102.96 Aligned_cols=146 Identities=26% Similarity=0.326 Sum_probs=101.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeec--hh---------------------
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEG--KV--------------------- 693 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g--~~--------------------- 693 (1023)
++.+++.++|++++++|+++.+.||++...+..+.+++|+.......+++.+... +.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 5788999999999999999999999999999999999998643221111111100 00
Q ss_pred ----------------------------------------------hhc----cCHH---HHHHHHh------hceEe--
Q 042091 694 ----------------------------------------------FRA----LSDK---EREKVAQ------EITVM-- 712 (1023)
Q Consensus 694 ----------------------------------------------~~~----l~~~---~~~~~~~------~~~v~-- 712 (1023)
... .+++ ++.+.+. .+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 175 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSS 175 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEe
Confidence 000 0011 1111111 11111
Q ss_pred ----ccCCH--hhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHH
Q 042091 713 ----GRSSP--NDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 713 ----ar~~P--~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~ 782 (1023)
-...| .+|..-++.+.+. .+.++++||+.||.+|++.|+.|+||+ ++.+.+|+.||+++.+++-.++..
T Consensus 176 ~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 176 GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhh
Confidence 11222 3688888888765 256999999999999999999999999 899999999999998888777765
Q ss_pred H
Q 042091 783 V 783 (1023)
Q Consensus 783 ~ 783 (1023)
+
T Consensus 255 ~ 255 (256)
T TIGR00099 255 A 255 (256)
T ss_pred h
Confidence 4
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.63 E-value=1e-07 Score=95.65 Aligned_cols=105 Identities=17% Similarity=0.264 Sum_probs=82.1
Q ss_pred HHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHH
Q 042091 645 AVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLV 724 (1023)
Q Consensus 645 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV 724 (1023)
+|+.|+++|+++.++||+....+..+.+++|+... ++ .. ..|.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~---------~~-----------------------~~--~~k~~~~ 81 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL---------YQ-----------------------GQ--SNKLIAF 81 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------Ee-----------------------cc--cchHHHH
Confidence 89999999999999999999999999999998731 11 11 2344444
Q ss_pred HHHHh----CCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhH-HHHHH
Q 042091 725 QALRK----GGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFAS-VVKVV 784 (1023)
Q Consensus 725 ~~lq~----~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~-i~~~i 784 (1023)
+.+.+ ..+.++|+||+.||.+|++.|+++++|. ++.+..+..||+++..+.-.+ +.+++
T Consensus 82 ~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 82 SDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 44432 3467999999999999999999999999 888899999999998664333 44443
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.54 E-value=8.7e-07 Score=97.91 Aligned_cols=149 Identities=17% Similarity=0.138 Sum_probs=101.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechh----------------hh--cc
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKV----------------FR--AL 697 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~----------------~~--~l 697 (1023)
+.+.+++.++|+.|+++|++++++||+....+..+.+++|+..+....+++.+...+. +. .+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 4567889999999999999999999999999999999999875444444444432110 00 01
Q ss_pred CHHHHHHHH------------------------------------hh--c--eEe-c-----------------------
Q 042091 698 SDKEREKVA------------------------------------QE--I--TVM-G----------------------- 713 (1023)
Q Consensus 698 ~~~~~~~~~------------------------------------~~--~--~v~-a----------------------- 713 (1023)
+.+...+++ .. + .++ .
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 179 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRG 179 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEEC
Confidence 111000000 00 0 000 0
Q ss_pred ----cC-CHhhHHHHHHHHHhC----C-CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHH----hcc-Cccc--cCCC
Q 042091 714 ----RS-SPNDKLLLVQALRKG----G-DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAK----ENS-DIII--LDDN 776 (1023)
Q Consensus 714 ----r~-~P~~K~~iV~~lq~~----g-~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak----~~a-diil--~~~~ 776 (1023)
.. .+.+|...++.+.+. . +.|+++||+.||.+|++.|++|+||+ |+.+..| ..| +.+. ..++
T Consensus 180 ~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~ 258 (273)
T PRK00192 180 GRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPG 258 (273)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCC
Confidence 00 011566666666543 4 88999999999999999999999999 9999988 666 6777 4556
Q ss_pred hhHHHHHHH
Q 042091 777 FASVVKVVR 785 (1023)
Q Consensus 777 ~~~i~~~i~ 785 (1023)
-.++.++++
T Consensus 259 ~~Gv~~~l~ 267 (273)
T PRK00192 259 PEGWAEAIN 267 (273)
T ss_pred cHHHHHHHH
Confidence 778888875
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.8e-05 Score=91.75 Aligned_cols=99 Identities=19% Similarity=0.235 Sum_probs=76.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
|++|++.+.+++++++|+++.++|+-+...+..+++.+|+.+ .++.++.. .++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd--------~Vigsd~~------------------~~~k 125 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD--------GVFASDGT------------------TNLK 125 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC--------EEEeCCCc------------------cccC
Confidence 588999999999999999999999999999999999999832 23333221 2456
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV 763 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ 763 (1023)
|+.|.+.++..... +.+.++||+.||.|+++.|+-.++++ .+...
T Consensus 126 g~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 126 GAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred CchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 77776655432222 22578899999999999999999997 44443
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.4e-06 Score=91.86 Aligned_cols=126 Identities=20% Similarity=0.269 Sum_probs=92.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec--c
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG--R 714 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a--r 714 (1023)
++.||+.+.++.|+++ +++.++|+.....+..+.+++|+..... .....+++.. +.. -
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~---~~~~~~~~~~----------------i~~~~~ 127 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC---HSLEVDEDGM----------------ITGYDL 127 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc---ceEEECCCCe----------------EECccc
Confidence 5789999999999999 9999999999999999999999863111 0011111100 001 1
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCc-cccCCChhHHHHHHH
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI-IILDDNFASVVKVVR 785 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adi-il~~~~~~~i~~~i~ 785 (1023)
..|..|...++.++..+..++|+|||.||.+|.+.|++|+..+ ...+.....++. ++. ++..+...+.
T Consensus 128 ~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l~ 196 (205)
T PRK13582 128 RQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAID 196 (205)
T ss_pred cccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHHH
Confidence 2477898999999888889999999999999999999999887 443444455665 443 5666665553
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.6e-07 Score=90.37 Aligned_cols=110 Identities=24% Similarity=0.339 Sum_probs=80.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
.+-||+++.++.|++.|.+|.++||--..-+..+|.++||+..+...+....-..-++...... -.-+.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~-----------~ptsd 156 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTN-----------EPTSD 156 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccC-----------Ccccc
Confidence 5789999999999999999999999999999999999999875443222111110001000000 01133
Q ss_pred HhhHHHHHHHHHhC--CCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 717 PNDKLLLVQALRKG--GDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 717 P~~K~~iV~~lq~~--g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
...|.++++.++++ -+.++|+|||.||.+|+..||.=|+.|
T Consensus 157 sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 45899999999885 457899999999999999988877765
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.2e-07 Score=92.18 Aligned_cols=96 Identities=18% Similarity=0.249 Sum_probs=77.8
Q ss_pred HHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHH
Q 042091 644 DAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLL 723 (1023)
Q Consensus 644 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~i 723 (1023)
.+++.|+++|+++.++||.....+..+++++|+... |. ..++|...
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~--------------------------------f~--g~~~k~~~ 100 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL--------------------------------YQ--GQSNKLIA 100 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee--------------------------------ec--CCCcHHHH
Confidence 689999999999999999999999999999998631 11 12335455
Q ss_pred HHHHHh-C---CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccC
Q 042091 724 VQALRK-G---GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILD 774 (1023)
Q Consensus 724 V~~lq~-~---g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~ 774 (1023)
++.+.+ . ...|+|+||+.||.+|++.|+++++++ ++.+..+..||+++..
T Consensus 101 l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~ 154 (183)
T PRK09484 101 FSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRI 154 (183)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecC
Confidence 444433 2 357999999999999999999999998 7888889999999964
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.3e-06 Score=94.26 Aligned_cols=144 Identities=14% Similarity=0.209 Sum_probs=96.3
Q ss_pred ccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCC--CCCCCCCeeeech------h----h-------------
Q 042091 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGS--DAEANDPNIIEGK------V----F------------- 694 (1023)
Q Consensus 640 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~vi~g~------~----~------------- 694 (1023)
++..++++ ++++|++++++||+....+..+.+++++..+ ....+++.+.... . +
T Consensus 18 ~~~~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (236)
T TIGR02471 18 ASFVELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEAL 96 (236)
T ss_pred HHHHHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHH
Confidence 33446666 6999999999999999999999999998533 1122222221110 0 0
Q ss_pred hcc--------------------CH------HHHHHHHhh----ce-Eec-----cCCH--hhHHHHHHHHHhC-C---C
Q 042091 695 RAL--------------------SD------KEREKVAQE----IT-VMG-----RSSP--NDKLLLVQALRKG-G---D 732 (1023)
Q Consensus 695 ~~l--------------------~~------~~~~~~~~~----~~-v~a-----r~~P--~~K~~iV~~lq~~-g---~ 732 (1023)
..+ .+ +++.+.+.. .. +++ ...| ..|...++.+.++ | .
T Consensus 97 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~ 176 (236)
T TIGR02471 97 ADIPGLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLE 176 (236)
T ss_pred hcCCCcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHH
Confidence 000 00 011111111 11 111 1233 3788888888664 3 3
Q ss_pred EEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccC----ccccCCChhHHHHHHH
Q 042091 733 VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSD----IIILDDNFASVVKVVR 785 (1023)
Q Consensus 733 ~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~ad----iil~~~~~~~i~~~i~ 785 (1023)
.|+++||+.||.+|++.+++|++|+ ++.+..|+.|| ++...++-.++.++|+
T Consensus 177 ~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 177 QILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred HEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 5899999999999999999999999 99999999999 7777777788888885
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.32 E-value=2e-06 Score=90.25 Aligned_cols=117 Identities=20% Similarity=0.228 Sum_probs=82.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
+++|++.+.++.|+++|+++.++|+-....+..+++.+|+..... ..+...+ -..... ..+....
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~----~~~~~~~-~g~~~p----------~~~~~~~ 144 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYS----NELVFDE-KGFIQP----------DGIVRVT 144 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEE----EEEEEcC-CCeEec----------ceeeEEc
Confidence 689999999999999999999999999999999999999753110 0111100 000000 0011234
Q ss_pred HhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccC
Q 042091 717 PNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSD 769 (1023)
Q Consensus 717 P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~ad 769 (1023)
|..|.++++.+.++ .+.++++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 145 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 145 FDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred cccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 56677777766543 346999999999999999999999997 55555555555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.22 E-value=8.4e-06 Score=87.14 Aligned_cols=56 Identities=14% Similarity=0.087 Sum_probs=45.0
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE 690 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~ 690 (1023)
.+..-+++.++|++|+++|++++++||+....+..+.+++|+..+....+++.+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~ 68 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFI 68 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEe
Confidence 34556679999999999999999999999999999999999865444444444443
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.4e-06 Score=80.33 Aligned_cols=115 Identities=22% Similarity=0.348 Sum_probs=91.1
Q ss_pred HHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHH
Q 042091 644 DAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLL 723 (1023)
Q Consensus 644 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~i 723 (1023)
..|+.+.+.|+++-++||++...+..=|+++||.. + | .--.+|...
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------~-----------------------~--qG~~dK~~a 87 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------L-----------------------Y--QGISDKLAA 87 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------e-----------------------e--echHhHHHH
Confidence 46889999999999999999999999999999973 1 1 223577777
Q ss_pred HHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCC----hhHHHHHHHHHHHHHHh
Q 042091 724 VQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDN----FASVVKVVRWGRSVFAN 793 (1023)
Q Consensus 724 V~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~----~~~i~~~i~~gR~~~~~ 793 (1023)
.+.|.++ -+.|+++||-.||.|+|+..++++|.. ++-+..++.||+|+.... +..+.++|..++..+.-
T Consensus 88 ~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 88 FEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 7666654 457999999999999999999999998 888889999999997553 44455555555544443
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.5e-05 Score=84.76 Aligned_cols=137 Identities=15% Similarity=0.093 Sum_probs=88.9
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe--c
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM--G 713 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~--a 713 (1023)
-+++||+.+.++.|++.|+++.++||.....+..+.+.++.... ... ....++|..+....+ .-..+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-i~~-n~~~~~~~~~~~~~p--------~~~~~~~~ 138 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-IYC-NEADFSNEYIHIDWP--------HPCDGTCQ 138 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-EEe-ceeEeeCCeeEEeCC--------CCCccccc
Confidence 37999999999999999999999999999999999988754321 100 112233332211000 00000 0
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHh--ccCccccCCChhHHHHHHH
Q 042091 714 RSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE--NSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~--~adiil~~~~~~~i~~~i~ 785 (1023)
......|..+++.++...+.+.|+|||.||.+|++.||+.+|-+ .-.+-.++ .+.+.+ ++|..+...++
T Consensus 139 ~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 139 NQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred cCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 11135799999999887788999999999999999999988644 21121121 122222 36777776664
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.09 E-value=2.9e-05 Score=82.88 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=41.6
Q ss_pred cccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCC-CCCCCCCCCeeee
Q 042091 639 RPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGIL-GSDAEANDPNIIE 690 (1023)
Q Consensus 639 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~-~~~~~~~~~~vi~ 690 (1023)
-+.++++|+.|+++|++++++||+....+..+.+++|+. .+....+++.+.+
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~ 70 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHL 70 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEc
Confidence 344899999999999999999999999999999999986 3333344444443
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.05 E-value=3.6e-06 Score=87.50 Aligned_cols=92 Identities=27% Similarity=0.385 Sum_probs=69.0
Q ss_pred ccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHh-
Q 042091 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPN- 718 (1023)
Q Consensus 640 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~- 718 (1023)
+++.+.|+.++++|++++++||+....+.++++.+|+.... ++..+....- +.....+.+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-------v~~~~~~~~~----------~~~~~~~~~~~~ 154 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-------VIGNELFDNG----------GGIFTGRITGSN 154 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-------EEEEEEECTT----------CCEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-------EEEEeeeecc----------cceeeeeECCCC
Confidence 78889999999999999999999999999999999998521 1111100000 11223444444
Q ss_pred --hHHHHHHHH------HhCCCEEEEEcCCccCHHHhh
Q 042091 719 --DKLLLVQAL------RKGGDVVAVTGDGTNDAPALH 748 (1023)
Q Consensus 719 --~K~~iV~~l------q~~g~~V~~iGDG~ND~~aL~ 748 (1023)
.|...++.+ +.....+.++|||.||.||||
T Consensus 155 ~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 155 CGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 499999999 445789999999999999986
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.8e-05 Score=83.12 Aligned_cols=128 Identities=25% Similarity=0.306 Sum_probs=84.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCee------eechhhhccCHHHHHHHHhhce
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNI------IEGKVFRALSDKEREKVAQEIT 710 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~v------i~g~~~~~l~~~~~~~~~~~~~ 710 (1023)
+++|++.+.++.|+++|+++.++||.....+..+.+.+|+.....-. .... +.|.... .
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~-~~~~~~~~g~~~g~~~~--------------~ 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFA-NQILFGDSGEYAGFDEN--------------E 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEE-eEEEEcCCCcEECccCC--------------C
Confidence 47899999999999999999999999999999999999996311000 0001 1111000 0
Q ss_pred EeccCCHhhHHHHHHHHHhC--CCEEEEEcCCccCHHHhhh--CCccEEecCCC-CHHHHhccCccccCCChhHHHHH
Q 042091 711 VMGRSSPNDKLLLVQALRKG--GDVVAVTGDGTNDAPALHE--ADIGLAMGIQG-TEVAKENSDIIILDDNFASVVKV 783 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~~--g~~V~~iGDG~ND~~aL~~--AdvgIamg~~g-~~~ak~~adiil~~~~~~~i~~~ 783 (1023)
..+....|.+.++.+.++ .+.++|+||+.||..|.+. ++++++.|... .+.....+|+++. ++..+..+
T Consensus 149 --~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 149 --PTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred --cccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 001123477777776654 3568999999999999777 46666655221 2334556899886 56665543
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.7e-05 Score=84.79 Aligned_cols=150 Identities=14% Similarity=0.121 Sum_probs=100.8
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCC--CCCCCCCeeeechhh------------------
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGS--DAEANDPNIIEGKVF------------------ 694 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~vi~g~~~------------------ 694 (1023)
..+..|...+++++++++|+.+++.||+....++.+.+++++..+ ....+++.+..+...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 346779999999999999999999999999999999999998765 222333333322100
Q ss_pred --------hc-----------------cCHHH----H---HHHHhh----ceE-ec-----cCCH--hhHHHHHHHHHhC
Q 042091 695 --------RA-----------------LSDKE----R---EKVAQE----ITV-MG-----RSSP--NDKLLLVQALRKG 730 (1023)
Q Consensus 695 --------~~-----------------l~~~~----~---~~~~~~----~~v-~a-----r~~P--~~K~~iV~~lq~~ 730 (1023)
.. ...+. + .+.+.+ +.+ .+ ...| ..|...++.+.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 00111 1 111111 111 11 1233 4888888888764
Q ss_pred ----CCEEEEEcCCccCHHHhhh-CCccEEecCCCCHHHHhccC-------ccccCCChhHHHHHHH
Q 042091 731 ----GDVVAVTGDGTNDAPALHE-ADIGLAMGIQGTEVAKENSD-------IIILDDNFASVVKVVR 785 (1023)
Q Consensus 731 ----g~~V~~iGDG~ND~~aL~~-AdvgIamg~~g~~~ak~~ad-------iil~~~~~~~i~~~i~ 785 (1023)
...|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++.....-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3679999999999999998 67999999 89888886543 5444445677777764
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.8e-05 Score=81.17 Aligned_cols=98 Identities=21% Similarity=0.288 Sum_probs=71.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC---CCCCeeeechhhhccCHHHHHHHHhhceEec
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE---ANDPNIIEGKVFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~---~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a 713 (1023)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+..-... ......++|+... -.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~----------------~~ 136 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEG----------------QV 136 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCC----------------cc
Confidence 4789999999999999999999999999999999999998632110 0000022222110 01
Q ss_pred cCCHhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhC
Q 042091 714 RSSPNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEA 750 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~A 750 (1023)
.+.+..|...++.++++ ...+.++|||.||.+|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 24568899999887654 34689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=7.1e-05 Score=80.04 Aligned_cols=128 Identities=22% Similarity=0.320 Sum_probs=90.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++.||+.+.++.|++.|+++.++||........+.+.+|+.... ..++.++... ....
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF-----SVVIGGDSLP----------------NKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-----cEEEcCCCCC----------------CCCc
Confidence 368999999999999999999999999999999999999986421 1233322211 0112
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEEec--CC-CCHHHHhccCccccCCChhHHHHHHHH
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI-GLAMG--IQ-GTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv-gIamg--~~-g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
.|+--..+++.++...+.++++||+.||..+.+.|++ +|.+. .. ..+.....+|+++. ++..+..++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 2333344445555455679999999999999999998 45443 11 23444567888874 78888887754
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.92 E-value=3.5e-05 Score=79.74 Aligned_cols=113 Identities=15% Similarity=0.141 Sum_probs=77.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc-C
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR-S 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar-~ 715 (1023)
++++++.+.++.|++.|+++.++|+.+......+.+..|+..... .+++++.... .+..+.-...++.++.. .
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~-----~i~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFI-----EIYSNPASFD-NDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhee-----EEeccCceEC-CCCcEEEecCCCCccCcCC
Confidence 789999999999999999999999999999999999999864211 1222111000 00000000000111111 1
Q ss_pred CHhhHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEE
Q 042091 716 SPNDKLLLVQALRKG-GDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
....|.++++.++++ .+.+.++|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 223699999999887 8889999999999999999987664
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.9e-05 Score=80.57 Aligned_cols=106 Identities=16% Similarity=0.185 Sum_probs=78.4
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC---CCCCeeeechhhhccCHHHHHHHHhhceE
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE---ANDPNIIEGKVFRALSDKEREKVAQEITV 711 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~---~~~~~vi~g~~~~~l~~~~~~~~~~~~~v 711 (1023)
..+++|++.+.++.++++|+++.++||.....+..+++.+|+..-... .......+|+...
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~---------------- 148 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDG---------------- 148 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccC----------------
Confidence 346899999999999999999999999999999999999999642110 0001112222110
Q ss_pred eccCCHhhHHHHHHHHHh-CC---CEEEEEcCCccCHHHhhhCCccEEec
Q 042091 712 MGRSSPNDKLLLVQALRK-GG---DVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 712 ~ar~~P~~K~~iV~~lq~-~g---~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
-.+.++.|...++.+.+ .+ +.+.++||+.+|.||++.|+.++++.
T Consensus 149 -~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 149 -NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred -CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 12456788887776654 33 36899999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.89 E-value=4.7e-05 Score=81.21 Aligned_cols=135 Identities=16% Similarity=0.125 Sum_probs=85.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceE--e-c
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITV--M-G 713 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v--~-a 713 (1023)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +....... ....++|+.+..-.+ .-.. + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~-n~~~~~~~~~~~~kp--------~p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYC-NGSDFSGEYITITWP--------HPCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEE-eEEEecCCeeEEecc--------CCccccccc
Confidence 68999999999999999999999999999999999988 64311000 011223332210000 0000 0 0
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHh--ccCccccCCChhHHHHHHH
Q 042091 714 RSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE--NSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~--~adiil~~~~~~~i~~~i~ 785 (1023)
++ ...|..+++.++.....+.|+|||.||.+|.+.||+.++-+ .-.+.+++ .+.+.+ ++|..+...++
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l~ 213 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTELK 213 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHHH
Confidence 01 13488888888877778999999999999999999977632 11122222 233333 36777666653
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.86 E-value=9.5e-05 Score=78.91 Aligned_cols=128 Identities=23% Similarity=0.356 Sum_probs=96.4
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR 714 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar 714 (1023)
...+-|+++++++.|+++|++..++|++....+..+.+..|+..... .++.+.... ...
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~-----~i~g~~~~~----------------~~K 145 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD-----VIVGGDDVP----------------PPK 145 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc-----eEEcCCCCC----------------CCC
Confidence 45788999999999999999999999999999999999999986432 222222211 122
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC---ccEEecCC-CCHHHHhccCccccCCChhHHHHHHH
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEAD---IGLAMGIQ-GTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Ad---vgIamg~~-g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
-.|.....+++.+....+.++||||..+|..|=+.|+ ||+..|.+ +.......+|+++. ++..+...+.
T Consensus 146 P~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l~ 218 (220)
T COG0546 146 PDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALLA 218 (220)
T ss_pred cCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHHh
Confidence 3566666666666655447999999999999999998 77888742 45567777999987 6777666553
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00019 Score=77.80 Aligned_cols=53 Identities=4% Similarity=-0.048 Sum_probs=43.1
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCee
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNI 688 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~v 688 (1023)
+..-+.+.++|++|+++||.|++.||........+.+++|+..+....+++.+
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I 69 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAI 69 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEE
Confidence 34566799999999999999999999999999999999999754433333333
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00017 Score=86.41 Aligned_cols=41 Identities=17% Similarity=0.235 Sum_probs=37.0
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILG 678 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~ 678 (1023)
.-+.+.++|+.|+++|+.+++.||+....+..+++++|+..
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~ 474 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKD 474 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 33567999999999999999999999999999999999853
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00014 Score=76.54 Aligned_cols=126 Identities=18% Similarity=0.243 Sum_probs=87.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+.... ..++..++.. ..+-.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 133 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-----DHVIGSDEVP----------------RPKPA 133 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-----eeEEecCcCC----------------CCCCC
Confidence 78899999999999999999999999999999999999986421 1222222110 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE---ecC-CCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA---MGI-QGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa---mg~-~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+-=..+++.++-..+.++|+||+.+|..+-++|++... -|. +..+..++.+|+++. ++..+..+++
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~~ 204 (205)
T TIGR01454 134 PDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALCR 204 (205)
T ss_pred hHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHhh
Confidence 333344444454445679999999999999999998643 231 223346678999875 5666665543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.75 E-value=7.4e-05 Score=72.22 Aligned_cols=117 Identities=21% Similarity=0.246 Sum_probs=77.9
Q ss_pred eccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 633 GIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 633 ~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
.-..++++++.+.++.|++.|++++++||.....+....+++|+..... .++......................+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~~~~~~~~~~ 94 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFD-----PVITSNGAAIYYPKEGLFLGGGPFDI 94 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhh-----heeccchhhhhccccccccccccccc
Confidence 3456899999999999999999999999999999999999999842211 11111100000000000001111234
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC-CccE
Q 042091 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEA-DIGL 754 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~A-dvgI 754 (1023)
.+-.|+.+..+.+.+....+.++++||+.||..|.+.+ .-+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 95 GKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred CCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 46667777777777766667899999999999999984 4443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00022 Score=83.03 Aligned_cols=147 Identities=18% Similarity=0.163 Sum_probs=93.4
Q ss_pred CcccHHHHH-HHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--CCCCCeeeechhh--------------------
Q 042091 638 CRPGVKDAV-KLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDA--EANDPNIIEGKVF-------------------- 694 (1023)
Q Consensus 638 lr~~~~~~I-~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--~~~~~~vi~g~~~-------------------- 694 (1023)
+.+...+++ +++++.|+.+++.||+.+..+..+.++.++..+.. ..++..+..+...
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333344555 88999999999999999999999999999877631 1111111111000
Q ss_pred ---h----------------c----cCHHH-------HHHHHh----hceEe------ccCCH--hhHHHHHHHHHhC--
Q 042091 695 ---R----------------A----LSDKE-------REKVAQ----EITVM------GRSSP--NDKLLLVQALRKG-- 730 (1023)
Q Consensus 695 ---~----------------~----l~~~~-------~~~~~~----~~~v~------ar~~P--~~K~~iV~~lq~~-- 730 (1023)
. . ..++. +.+.+. ++.+. -...| ..|...++.|.++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 0 0 01111 111121 11211 12233 3698888888765
Q ss_pred --C---CEEEEEcCCccCHHHhhhCC-ccEEecCCCCHHHHhcc--------Ccccc-CCChhHHHHHHH
Q 042091 731 --G---DVVAVTGDGTNDAPALHEAD-IGLAMGIQGTEVAKENS--------DIIIL-DDNFASVVKVVR 785 (1023)
Q Consensus 731 --g---~~V~~iGDG~ND~~aL~~Ad-vgIamg~~g~~~ak~~a--------diil~-~~~~~~i~~~i~ 785 (1023)
| ..++++||+.||.+||+.|+ .||+|| |+.+..|+.+ +++.. +.+-+++.++++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 2 47899999999999999999 699999 9999888743 44433 345667777775
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00022 Score=78.27 Aligned_cols=139 Identities=14% Similarity=0.216 Sum_probs=86.9
Q ss_pred CCcccHHHHHHHHHh-CCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee--c----------------------
Q 042091 637 PCRPGVKDAVKLCRD-AGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE--G---------------------- 691 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~-aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~--g---------------------- 691 (1023)
.+-+++.++|+.|++ .|++++++||+....+..+.+.+++.-. ..++..+.+ |
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i--~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLA--GVHGAERRDINGKTHIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEE--EeCCCeeecCCCCeeeccCChhHHHHHHHHHHHH
Confidence 455789999999998 7999999999999999988877764210 000111100 0
Q ss_pred -----------hh------hhccC--HHHHHHHHhh-------ceEe-----ccCCH--hhHHHHHHHHHhC----CCEE
Q 042091 692 -----------KV------FRALS--DKEREKVAQE-------ITVM-----GRSSP--NDKLLLVQALRKG----GDVV 734 (1023)
Q Consensus 692 -----------~~------~~~l~--~~~~~~~~~~-------~~v~-----ar~~P--~~K~~iV~~lq~~----g~~V 734 (1023)
+. ++... .+.+..+... ..+. ....| .+|...++.+.+. ...|
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v 193 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTP 193 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 00 00011 1111111111 1111 11222 4888888877654 3578
Q ss_pred EEEcCCccCHHHhhhC----CccEEecCCCCHHHHhccCccccCCChhHHHHHH
Q 042091 735 AVTGDGTNDAPALHEA----DIGLAMGIQGTEVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 735 ~~iGDG~ND~~aL~~A----dvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i 784 (1023)
+++||+.||.+|++.+ +.||+|| ++. ..|++.+. +...+...+
T Consensus 194 ~~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 194 VFVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EEEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHH
Confidence 9999999999999999 9999999 654 44777776 455555555
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0007 Score=74.70 Aligned_cols=127 Identities=19% Similarity=0.285 Sum_probs=84.1
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++.|++.++++.|+++|+++.++|+.+...+..+..+.|+.... ..++.++... ....
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-----~~i~~~d~~~----------------~~Kp 158 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-----RWIIGGDTLP----------------QKKP 158 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-----eEEEecCCCC----------------CCCC
Confidence 478999999999999999999999999999999999888885321 1223222210 0111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEec--C-CCCHHHHhccCccccCCChhHHHHHHH
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMG--I-QGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg--~-~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.|+-=..+.+.+.-..+.++++||+.||..+.+.|++. +++. . ...+..+..+|+++. ++..+..++.
T Consensus 159 ~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~~ 230 (272)
T PRK13223 159 DPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGCA 230 (272)
T ss_pred CcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHHh
Confidence 22222333333333356799999999999999999973 4433 1 122234457888885 6777765543
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00068 Score=71.91 Aligned_cols=125 Identities=18% Similarity=0.177 Sum_probs=85.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+++|+++.++|+.....+..+-+..|+.... ..++.++... .....
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-----~~i~~~~~~~----------------~~Kp~ 140 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF-----DVVITLDDVE----------------HAKPD 140 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce-----eEEEecCcCC----------------CCCCC
Confidence 47899999999999999999999999999999999999987421 1223222210 01233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc---EEecCCCC-HHHHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG---LAMGIQGT-EVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg---Iamg~~g~-~~ak~~adiil~~~~~~~i~~~i 784 (1023)
|+--.++++.+......+++|||+.+|..+-++|++- +.-|.... +.....+|+++. ++..+..++
T Consensus 141 p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 141 PEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred cHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 4444444555544456789999999999999999984 33331112 233456888876 677776655
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00072 Score=71.56 Aligned_cols=123 Identities=17% Similarity=0.212 Sum_probs=81.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.+...+..+.+..|+.... ..++.++... ...-.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-----SVLIGGDSLA----------------QRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-----cEEEecCCCC----------------CCCCC
Confidence 68999999999999999999999999999999999999986421 1233322211 01122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCC--C--CHHHHhccCccccCCChhHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQ--G--TEVAKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~--g--~~~ak~~adiil~~~~~~~i~~ 782 (1023)
|+-=..+.+.+....+.++++||+.||..+.++|++-...-.. + .+.....+|+++. ++..+..
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 2222333333333346699999999999999999987542211 1 1233456888775 4555443
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00078 Score=73.22 Aligned_cols=54 Identities=20% Similarity=0.292 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHhCCCEEEEEcC----CccCHHHhhhC-CccEEecCCCCHHHHhccCccc
Q 042091 718 NDKLLLVQALRKGGDVVAVTGD----GTNDAPALHEA-DIGLAMGIQGTEVAKENSDIII 772 (1023)
Q Consensus 718 ~~K~~iV~~lq~~g~~V~~iGD----G~ND~~aL~~A-dvgIamg~~g~~~ak~~adiil 772 (1023)
.+|..-++.|.++.+.|+++|| |.||.+||+.| -.|++++ ++.+..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 4788888888777778999999 99999999976 6778888 88888887776543
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0017 Score=69.41 Aligned_cols=119 Identities=15% Similarity=0.225 Sum_probs=79.6
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
-++.||+.++++.|+++|+++.++|+........+.++.|+.... ..++.+.... ..+-
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp 149 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF-----DALASAEKLP----------------YSKP 149 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc-----cEEEEcccCC----------------CCCC
Confidence 368899999999999999999999999999999999999987532 1233332211 1122
Q ss_pred CHhhHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccEEecCCCC---HHHHhccCccccCCChhHH
Q 042091 716 SPNDKLLLVQALRKG---GDVVAVTGDGTNDAPALHEADIGLAMGIQGT---EVAKENSDIIILDDNFASV 780 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~---g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~---~~ak~~adiil~~~~~~~i 780 (1023)
.|+ -+.+.+++. .+.++++||+.||+.+-+.|++....-..+. +.-...+|+++. ++..+
T Consensus 150 ~~~---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl 215 (222)
T PRK10826 150 HPE---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTEL 215 (222)
T ss_pred CHH---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHH
Confidence 232 223333333 3568999999999999999998754431221 122235677765 45544
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0024 Score=68.64 Aligned_cols=127 Identities=17% Similarity=0.163 Sum_probs=87.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+.... ..++.+.... ...-.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 153 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC-----AVLIGGDTLA----------------ERKPH 153 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc-----cEEEecCcCC----------------CCCCC
Confidence 68899999999999999999999999999888888889886421 2333333211 12234
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE---ecCC-CC-HHHHhccCccccCCChhHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA---MGIQ-GT-EVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa---mg~~-g~-~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
|+-=..+++.+.-..+.++|+||+.||..+-+.|++... -|.. .. +.....+|+++. ++..+...+.|
T Consensus 154 p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~~~ 226 (229)
T PRK13226 154 PLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPATW 226 (229)
T ss_pred HHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHhcC
Confidence 444445555555556779999999999999999988743 2211 11 223456898886 66666665543
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0011 Score=69.84 Aligned_cols=118 Identities=26% Similarity=0.316 Sum_probs=76.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeech-hh-h--------------c----
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGK-VF-R--------------A---- 696 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~-~~-~--------------~---- 696 (1023)
++.+.+.+++++|++.|++++++||+....+..+.++++. .....+++.+.... .. . .
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~--~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPL--PLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAE 94 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCC--CEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCce
Confidence 5778999999999999999999999999999999988542 11111111111100 00 0 0
Q ss_pred ---c-------------------------CHH---HHHHHHh-------hceEec------cCCH--hhHHHHHHHHHhC
Q 042091 697 ---L-------------------------SDK---EREKVAQ-------EITVMG------RSSP--NDKLLLVQALRKG 730 (1023)
Q Consensus 697 ---l-------------------------~~~---~~~~~~~-------~~~v~a------r~~P--~~K~~iV~~lq~~ 730 (1023)
+ .++ ++.+.+. .+.+.. ...| .+|...++.+.++
T Consensus 95 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~ 174 (204)
T TIGR01484 95 LKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKE 174 (204)
T ss_pred eeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHH
Confidence 0 000 1111111 122221 1223 6899999888765
Q ss_pred -C---CEEEEEcCCccCHHHhhhCCccEEe
Q 042091 731 -G---DVVAVTGDGTNDAPALHEADIGLAM 756 (1023)
Q Consensus 731 -g---~~V~~iGDG~ND~~aL~~AdvgIam 756 (1023)
| ..++++||+.||.+|++.+++|+||
T Consensus 175 ~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 175 LNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred hCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 3 5699999999999999999999997
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0019 Score=68.43 Aligned_cols=104 Identities=13% Similarity=0.089 Sum_probs=74.9
Q ss_pred CCcccHHHHH-HHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhc-cCHHHHHHHHhhceE-ec
Q 042091 637 PCRPGVKDAV-KLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRA-LSDKEREKVAQEITV-MG 713 (1023)
Q Consensus 637 ~lr~~~~~~I-~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~-l~~~~~~~~~~~~~v-~a 713 (1023)
.++|++.+.| +.+++.|+++.++|+-...-+..+++.+|+.... .++ |.+++. ++ -.+ -.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-----~~i--~t~l~~~~t----------g~~~g~ 157 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-----NLI--ASQMQRRYG----------GWVLTL 157 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-----ceE--EEEEEEEEc----------cEECCc
Confidence 4689999999 5788899999999999999999999999963210 111 111110 00 011 12
Q ss_pred cCCHhhHHHHHHHH-HhCCCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 714 RSSPNDKLLLVQAL-RKGGDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 714 r~~P~~K~~iV~~l-q~~g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
.|..+.|..-++.. ........+-||+.||.|||+.|+.+++++
T Consensus 158 ~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 158 RCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred cCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 46778998877754 333445568899999999999999999986
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0022 Score=80.77 Aligned_cols=171 Identities=16% Similarity=0.153 Sum_probs=101.4
Q ss_pred HHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeec--cCCCcccHHHHHHHHHh-CCCEEEEECCCCHHHHHHH
Q 042091 594 KAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGI--KDPCRPGVKDAVKLCRD-AGVKVRMVTGDNLQTAKAI 670 (1023)
Q Consensus 594 ~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~--~D~lr~~~~~~I~~l~~-aGi~v~mlTGD~~~ta~~i 670 (1023)
+.....|.....|.+++- -|.|++....- ...+.+++.+++++|.+ .|+.|+++||+........
T Consensus 481 ~~~~~~y~~~~~rLi~~D------------~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~ 548 (726)
T PRK14501 481 EEIIARYRAASRRLLLLD------------YDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERW 548 (726)
T ss_pred HHHHHHHHhccceEEEEe------------cCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHH
Confidence 334444444445656554 45666654211 12367899999999999 6999999999999998887
Q ss_pred HHHcCCCCCCCCCCCCeee-echhhhc-----------------------------------------cCH-------HH
Q 042091 671 ALECGILGSDAEANDPNII-EGKVFRA-----------------------------------------LSD-------KE 701 (1023)
Q Consensus 671 a~~~gi~~~~~~~~~~~vi-~g~~~~~-----------------------------------------l~~-------~~ 701 (1023)
....++. ....++..+. .|..+.. .+. ++
T Consensus 549 ~~~~~l~--liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~ 626 (726)
T PRK14501 549 FGDLPIH--LVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANE 626 (726)
T ss_pred hCCCCeE--EEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHH
Confidence 7655531 0001111110 0000000 000 11
Q ss_pred HHHHHhh------ceEe-------ccCCHhhHHHHHHHHHhC--CCEEEEEcCCccCHHHhhhC---CccEEecCCCCHH
Q 042091 702 REKVAQE------ITVM-------GRSSPNDKLLLVQALRKG--GDVVAVTGDGTNDAPALHEA---DIGLAMGIQGTEV 763 (1023)
Q Consensus 702 ~~~~~~~------~~v~-------ar~~P~~K~~iV~~lq~~--g~~V~~iGDG~ND~~aL~~A---dvgIamg~~g~~~ 763 (1023)
+.+.+.. +.+. -+..-.+|...++.+.+. ...|+++||+.||.+|++.+ +.+|+|| ++
T Consensus 627 l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~--- 702 (726)
T PRK14501 627 LILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG--- 702 (726)
T ss_pred HHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC---
Confidence 1111111 1111 112225899999888874 35899999999999999986 6899998 53
Q ss_pred HHhccCccccCCChhHHHHHHH
Q 042091 764 AKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 764 ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+.+|++.+.+. ..+..+++
T Consensus 703 -~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 703 -ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred -CCcceEeCCCH--HHHHHHHH
Confidence 56788888743 55666554
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0026 Score=67.19 Aligned_cols=106 Identities=11% Similarity=0.108 Sum_probs=74.5
Q ss_pred CCcccHHHHHH-HHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVK-LCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~-~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++|++.+.|+ .++++|++++++|+-....+..+|+..|+..... + + |.+++.-.. .. ..-..|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-----~-i-~t~le~~~g-------g~-~~g~~c 158 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-----L-I-ASQIERGNG-------GW-VLPLRC 158 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-----E-E-EEEeEEeCC-------ce-EcCccC
Confidence 47999999996 7888999999999999999999999966643111 1 1 111110000 00 011346
Q ss_pred CHhhHHHHHHHHH-hCCCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 716 SPNDKLLLVQALR-KGGDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 716 ~P~~K~~iV~~lq-~~g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
.-++|.+-++..- .......+-||+.||.|||+.||.+++++
T Consensus 159 ~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 159 LGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred CChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 7789988776543 23344568899999999999999999985
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0046 Score=68.09 Aligned_cols=121 Identities=17% Similarity=0.170 Sum_probs=82.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.+...+..+-+.+|+.... ..++.++.. ...
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-----~~vi~~~~~-------------------~~k 197 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-----SVVQAGTPI-------------------LSK 197 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-----EEEEecCCC-------------------CCC
Confidence 57899999999999999999999999999999999999986431 123333221 011
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE---ecCCCCH--HHHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA---MGIQGTE--VAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa---mg~~g~~--~ak~~adiil~~~~~~~i~~~i 784 (1023)
|+-=..+++.+.-..+.++||||+.+|..+-++|++-.. -| .... .....+|+++. ++..+..++
T Consensus 198 ~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g-~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 198 RRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWG-FNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecC-CCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 221122222232234569999999999999999988643 22 1222 23456898885 677777655
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0047 Score=65.78 Aligned_cols=125 Identities=23% Similarity=0.316 Sum_probs=82.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCC--CCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGIL--GSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~--~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a 713 (1023)
.++.||+.+.++.|+++|+++.++|+-....+..+.+.+|+. ... ..++.+.+.. ..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-----~~i~~~~~~~----------------~~ 144 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-----DAVVCPSDVA----------------AG 144 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-----CEEEcCCcCC----------------CC
Confidence 379999999999999999999999999999999999999986 321 2333333221 01
Q ss_pred cCCHhhHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEEec-CCCCH----HHHhccCccccCCChhHHHHH
Q 042091 714 RSSPNDKLLLVQALRKG-GDVVAVTGDGTNDAPALHEADIGLAMG-IQGTE----VAKENSDIIILDDNFASVVKV 783 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~~aL~~AdvgIamg-~~g~~----~ak~~adiil~~~~~~~i~~~ 783 (1023)
+-.|+-=...++.+.-. .+.++|+||+.+|..+-+.|++..+++ ..|.. .....+|+++. ++..+..+
T Consensus 145 KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~~ 218 (220)
T TIGR03351 145 RPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPAL 218 (220)
T ss_pred CCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHHh
Confidence 22233222233333322 357999999999999999999986322 12221 12345777765 55555443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0066 Score=62.01 Aligned_cols=145 Identities=17% Similarity=0.272 Sum_probs=91.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCC-----CC-----------------Ceeeechhh
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEA-----ND-----------------PNIIEGKVF 694 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~-----~~-----------------~~vi~g~~~ 694 (1023)
.+-||+.++++.+++. ...+++|-...+-+.++|.-+|+....... +. ...++|+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4679999999999876 456677777888999999999996543211 00 011222211
Q ss_pred --------hccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCC-cc-EEecCCCC
Q 042091 695 --------RALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKG---GDVVAVTGDGTNDAPALHEAD-IG-LAMGIQGT 761 (1023)
Q Consensus 695 --------~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~---g~~V~~iGDG~ND~~aL~~Ad-vg-Iamg~~g~ 761 (1023)
..+.+.|..+++.++.+... ..|.++++.+.+. ....+++||++.|..||+.+. -| +|+.-||.
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGg---g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGG---GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccC---cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 00112222223333322222 2444444444442 344689999999999999883 22 44444899
Q ss_pred HHHHhccCccccCCChhHHHHHHH
Q 042091 762 EVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 762 ~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+-|...||+.+.+.+......+|+
T Consensus 239 eYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccccceEEeccchhhhhHHHH
Confidence 999999999999888888777774
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0064 Score=66.52 Aligned_cols=121 Identities=12% Similarity=0.180 Sum_probs=81.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.....+..+-+.+|+.... ..++.+.+.. ...-.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F-----d~ii~~~d~~----------------~~KP~ 167 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF-----SVVLAAEDVY----------------RGKPD 167 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC-----cEEEecccCC----------------CCCCC
Confidence 57899999999999999999999999999999999999986532 2445544331 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE-EecCCCCHHHHhccCccccCCChhHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL-AMGIQGTEVAKENSDIIILDDNFASV 780 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI-amg~~g~~~ak~~adiil~~~~~~~i 780 (1023)
|+-=...++.+.-....++||||..+|..+-+.|++-. ++...........+|+++. ++..+
T Consensus 168 Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el 230 (260)
T PLN03243 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDL 230 (260)
T ss_pred HHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHH
Confidence 33223334444444566999999999999999999843 2221222222334677765 44444
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0063 Score=66.18 Aligned_cols=117 Identities=18% Similarity=0.141 Sum_probs=82.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+-....+..+-+.+|+.... ..++.+++.. ...-.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F-----d~iv~~~~~~----------------~~KP~ 166 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF-----QAVIIGSECE----------------HAKPH 166 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC-----cEEEecCcCC----------------CCCCC
Confidence 57899999999999999999999999999999999999997532 2444444331 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCC-C--HHHHhccCccccC
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQG-T--EVAKENSDIIILD 774 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g-~--~~ak~~adiil~~ 774 (1023)
|+-=....+.+.-..+.++|+||+.+|..+=++|++-...-..+ . +.....+|+++.+
T Consensus 167 p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 167 PDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred hHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 44444445555444567999999999999999998853321112 1 2233468888763
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0096 Score=64.94 Aligned_cols=97 Identities=21% Similarity=0.197 Sum_probs=68.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+.... ...++.+++.. ...-.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f----~d~ii~~~~~~----------------~~KP~ 158 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR----PDYNVTTDDVP----------------AGRPA 158 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC----CceEEccccCC----------------CCCCC
Confidence 57899999999999999999999999999999999999987531 12334433321 11223
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCcc
Q 042091 717 PNDKLLLVQALRKG-GDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 717 P~~K~~iV~~lq~~-g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
|+-=....+.+.-. .+.++||||+.+|..+=+.|++-
T Consensus 159 p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 159 PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 33323333333322 34599999999999999999964
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.014 Score=63.75 Aligned_cols=130 Identities=13% Similarity=0.180 Sum_probs=82.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCC-------CCCeeeechhhhccCHHHHHHHHhhc
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEA-------NDPNIIEGKVFRALSDKEREKVAQEI 709 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~-------~~~~vi~g~~~~~l~~~~~~~~~~~~ 709 (1023)
++|||+.+.++.|++.|+++.++||-....+..+.+++|+....... +..-+.+|..-
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~--------------- 185 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKG--------------- 185 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCC---------------
Confidence 78999999999999999999999999999999999999986433210 01112223110
Q ss_pred eEeccCCHhhHHHHHHH-----HH--hCCCEEEEEcCCccCHHHhhhC---CccEEecC-CCC-----HHHHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQA-----LR--KGGDVVAVTGDGTNDAPALHEA---DIGLAMGI-QGT-----EVAKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~-----lq--~~g~~V~~iGDG~ND~~aL~~A---dvgIamg~-~g~-----~~ak~~adiil~ 773 (1023)
--.....|.+.+.. ++ .....|.++|||.||+.|..-. .--+.+|- +.. +.-+++-|||+.
T Consensus 186 ---P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~ 262 (277)
T TIGR01544 186 ---PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 262 (277)
T ss_pred ---CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEE
Confidence 00112355544432 22 2236799999999999995433 11222221 111 225678899999
Q ss_pred CCChhHHHHHH
Q 042091 774 DDNFASVVKVV 784 (1023)
Q Consensus 774 ~~~~~~i~~~i 784 (1023)
+|.=-.++..|
T Consensus 263 ~D~t~~v~~~i 273 (277)
T TIGR01544 263 QDETLEVANSI 273 (277)
T ss_pred CCCCchHHHHH
Confidence 88655555544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.013 Score=64.53 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=65.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++-||+.++++.|+++|+++.++||.....+..+-+..|+.... ...++.+++. .+..
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~----~d~i~~~~~~------------------~~~K 158 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR----PDHVVTTDDV------------------PAGR 158 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC----ceEEEcCCcC------------------CCCC
Confidence 57899999999999999999999999999888888887775421 0123333221 1122
Q ss_pred HhhHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCc
Q 042091 717 PNDKLLLVQALRKGG----DVVAVTGDGTNDAPALHEADI 752 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g----~~V~~iGDG~ND~~aL~~Adv 752 (1023)
|. ..-+.+.+++.| +.++||||+.+|..+-+.|++
T Consensus 159 P~-p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 159 PY-PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred CC-hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 31 222334444432 569999999999999999997
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.013 Score=62.32 Aligned_cols=114 Identities=17% Similarity=0.214 Sum_probs=75.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+... ..++.++... ...-.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~------~~i~~~~~~~----------------~~KP~ 140 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP------EVFVTAERVK----------------RGKPE 140 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc------cEEEEHHHhc----------------CCCCC
Confidence 5789999999999999999999999887777766667777321 2344443321 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecCCCC-HHHHhccCcccc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMGIQGT-EVAKENSDIIIL 773 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg~~g~-~~ak~~adiil~ 773 (1023)
|+-=....+.+.-..+.++||||..+|+.+-+.|++- |++. .+. ......+|+++.
T Consensus 141 p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 141 PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLH 198 (218)
T ss_pred cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEec
Confidence 3333333344443457799999999999999999984 4454 322 223345677665
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0076 Score=63.01 Aligned_cols=94 Identities=20% Similarity=0.116 Sum_probs=69.6
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR 714 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar 714 (1023)
.+++.+++.++++.|+++|+++.++||.....+..+-+.+|+.... ..++.+++. ..+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~~-----------------~~K 161 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF-----PVQIWMEDC-----------------PPK 161 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC-----CEEEeecCC-----------------CCC
Confidence 4557778899999999999999999999999999999999987422 233333321 123
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEA 750 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~A 750 (1023)
..|+--..+++.+.-..+.++||||+.+|+.+-+.|
T Consensus 162 P~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 162 PNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred cCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 445554555666655567799999999999886654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0059 Score=66.31 Aligned_cols=46 Identities=26% Similarity=0.315 Sum_probs=37.0
Q ss_pred HhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHH
Q 042091 717 PNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV 763 (1023)
Q Consensus 717 P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ 763 (1023)
...|...|+.|+++ .+.|+++||+.||.+||..++-||.+| ++.+.
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 35899999999876 245778999999999999999999999 77776
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0067 Score=64.96 Aligned_cols=90 Identities=21% Similarity=0.240 Sum_probs=64.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCC----HHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDN----LQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~----~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
.+.+++++.++.+++.|+++.++||+. ..++..+.+..|+..... ...++.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~---f~vil~gd~~------------------ 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM---NPVIFAGDKP------------------ 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc---eeEEEcCCCC------------------
Confidence 477889999999999999999999964 669999999999942110 1223333210
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
...+|.. .+++.| .++++||..+|..+-+.|++-.
T Consensus 173 ---~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 173 ---GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred ---CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 1134444 344445 4889999999999999998753
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.03 Score=57.37 Aligned_cols=38 Identities=18% Similarity=0.223 Sum_probs=34.5
Q ss_pred cHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 042091 641 GVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILG 678 (1023)
Q Consensus 641 ~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~ 678 (1023)
.+.+.+.+|+++|++|+.+|.-....-...-+.+|+..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 46788999999999999999999999999999999973
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.011 Score=60.38 Aligned_cols=113 Identities=13% Similarity=-0.035 Sum_probs=66.5
Q ss_pred CCcEEEeeeeccC----CCcccHHHHHHHHHhCCCEEEEECCCCHH--------HHHHHHHHcCCCCCCCCCCCCeeeec
Q 042091 624 EELILLAIVGIKD----PCRPGVKDAVKLCRDAGVKVRMVTGDNLQ--------TAKAIALECGILGSDAEANDPNIIEG 691 (1023)
Q Consensus 624 ~~l~~lG~i~~~D----~lr~~~~~~I~~l~~aGi~v~mlTGD~~~--------ta~~ia~~~gi~~~~~~~~~~~vi~g 691 (1023)
.|.++.|-..+.+ ++-||+.++++.|++.|+++.++|+.... ......+..|+...... ....+
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----~~~~~ 86 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLC----PHKHG 86 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEEC----cCCCC
Confidence 5556655544332 36899999999999999999999987631 12233344555421000 00000
Q ss_pred hhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe
Q 042091 692 KVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM 756 (1023)
Q Consensus 692 ~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIam 756 (1023)
++.. ..+-.|+-=..+++.+...-+.++||||..+|..+=++|++-...
T Consensus 87 ~~~~----------------~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 87 DGCE----------------CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCCC----------------CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 0000 012233333444444443446799999999999999999886543
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0078 Score=64.50 Aligned_cols=89 Identities=21% Similarity=0.224 Sum_probs=64.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCC----CHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGD----NLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD----~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
.+.+++.+.++.++++|+++.++|+. ...++..+.+.+|+.... ..++.++...
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f-----~~i~~~d~~~----------------- 171 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN-----PVIFAGDKPG----------------- 171 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe-----eEEECCCCCC-----------------
Confidence 34555999999999999999999998 677999999999996421 2333333221
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 042091 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
...| +|. ..+++.| .++|+||..||..+-+.|++-
T Consensus 172 -~~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 172 -QYQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred -CCCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 1112 232 2445555 478999999999999999764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.019 Score=59.95 Aligned_cols=95 Identities=14% Similarity=0.202 Sum_probs=67.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+++|+++.++|+-+......+.+.+|+.... ..++..++. ....
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f-----d~i~~s~~~------------------~~~K 148 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF-----DAVLSADAV------------------RAYK 148 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh-----heeEehhhc------------------CCCC
Confidence 57899999999999999999999999999999999999985321 123333222 1223
Q ss_pred Hhh--HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 717 PND--KLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 717 P~~--K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
|.- =..+.+.+.-.-+.++++||+.+|+.+-+.|++-.
T Consensus 149 P~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 149 PAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred CCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 321 12333334333467899999999999999988753
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.014 Score=60.10 Aligned_cols=94 Identities=15% Similarity=0.225 Sum_probs=61.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+++|+++.++|+... +..+.+.+|+.... ..++++.+.. ..+..
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF-----DAIVDPAEIK----------------KGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC-----cEEEehhhcC----------------CCCCC
Confidence 6789999999999999999999997532 45677888876421 2333333221 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
|+-=....+.+.-..+.++||||+.+|+.+-+.|++-
T Consensus 144 p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 144 PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 2222223333332335689999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.016 Score=57.71 Aligned_cols=104 Identities=19% Similarity=0.175 Sum_probs=74.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcC----CCCCCCC-CCCCeeeechhhhccCHHHHHHHHhhceE
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECG----ILGSDAE-ANDPNIIEGKVFRALSDKEREKVAQEITV 711 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~g----i~~~~~~-~~~~~vi~g~~~~~l~~~~~~~~~~~~~v 711 (1023)
.++|+-++.++.+++.+++++++|+--.--...+-..++ |..-... .+..+-.+|+-.. +
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i---------------~ 137 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSI---------------K 137 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceee---------------e
Confidence 589999999999999999999999988877777777765 2211100 0111112222111 1
Q ss_pred ecc--CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 042091 712 MGR--SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 712 ~ar--~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
+.. .--.+|...|+.+++..+.+.++|||+.|..|-+.+|+-+|
T Consensus 138 ~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 138 YTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 111 12358999999999999999999999999999998888775
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.033 Score=66.37 Aligned_cols=123 Identities=12% Similarity=0.125 Sum_probs=83.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+++.. ....
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f-----~~i~~~d~v~-----------------~~~k 387 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV-----TETFSIEQIN-----------------SLNK 387 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc-----ceeEecCCCC-----------------CCCC
Confidence 68899999999999999999999999999999999999986421 2334443321 1123
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecC-CCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMGI-QGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg~-~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+-=...++.+ ..+.++|+||+.+|..+-+.|++- |++.. .+.+.....+|+++. ++..+..++.
T Consensus 388 P~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 388 SDLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred cHHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 33212222222 235699999999999999999973 33321 122222345788875 6777766654
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.021 Score=60.73 Aligned_cols=94 Identities=16% Similarity=0.184 Sum_probs=67.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+++|+++.++|+-+...+....+.+|+.... ..++.+.+. .+..
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~------------------~~~K 150 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF-----DAVITSEEE------------------GVEK 150 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc-----cEEEEeccC------------------CCCC
Confidence 58899999999999999999999999988888888899986422 123333322 1223
Q ss_pred H--hhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCcc
Q 042091 717 P--NDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIG 753 (1023)
Q Consensus 717 P--~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~Advg 753 (1023)
| +-=..+.+.+.-....++|+||.. +|..+-+.|++-
T Consensus 151 P~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 151 PHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 3 222223333333345799999998 999999999874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.047 Score=56.24 Aligned_cols=128 Identities=16% Similarity=0.156 Sum_probs=72.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCH---------------HHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHH
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNL---------------QTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKE 701 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~ 701 (1023)
.+.||+.++++.|+++|+++.++|..+. .....+-+..|+... .++....... + +
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-------~i~~~~~~~~--~-~ 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-------GIYYCPHHPE--D-G 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-------eEEECCCCCC--C-C
Confidence 4679999999999999999999998763 111223334555210 1111000000 0 0
Q ss_pred HHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecC-CCCH---HHHhcc--CccccCC
Q 042091 702 REKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGI-QGTE---VAKENS--DIIILDD 775 (1023)
Q Consensus 702 ~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~-~g~~---~ak~~a--diil~~~ 775 (1023)
.-...-.|+--..+++.+.-..+.++||||+.+|..+-+.|++. +++. .|.. .....+ |+++.
T Consensus 99 --------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~-~i~v~~g~~~~~~~~~~~~~~~ii~-- 167 (181)
T PRK08942 99 --------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT-PVLVRTGKGVTTLAEGAAPGTWVLD-- 167 (181)
T ss_pred --------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe-EEEEcCCCCchhhhcccCCCceeec--
Confidence 00112234433444555544457799999999999999999974 2221 2221 122335 77765
Q ss_pred ChhHHHHHHH
Q 042091 776 NFASVVKVVR 785 (1023)
Q Consensus 776 ~~~~i~~~i~ 785 (1023)
++..+..++.
T Consensus 168 ~l~el~~~l~ 177 (181)
T PRK08942 168 SLADLPQALK 177 (181)
T ss_pred CHHHHHHHHH
Confidence 5666666553
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.052 Score=62.05 Aligned_cols=121 Identities=16% Similarity=0.181 Sum_probs=82.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.....+..+-+..||.... ..++.+++.. ...-.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF-----d~Iv~sddv~----------------~~KP~ 274 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF-----SVIVAAEDVY----------------RGKPD 274 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc-----eEEEecCcCC----------------CCCCC
Confidence 47899999999999999999999999999999999999997432 2344444321 01122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHH-HhccCccccCCChhHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVA-KENSDIIILDDNFASV 780 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~a-k~~adiil~~~~~~~i 780 (1023)
|+-=...++.+.-....++|+||..+|+.|-+.|++-...-..+.... ...+|+++. ++..+
T Consensus 275 Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 275 PEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC--CHHHH
Confidence 333334444554456789999999999999999998543221222222 234777765 45444
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.032 Score=57.20 Aligned_cols=94 Identities=19% Similarity=0.215 Sum_probs=64.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|+++|+++.++|+-.... ..+..++|+...- ..++.+.+.. ...-.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 142 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF-----DVVIFSGDVG----------------RGKPD 142 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC-----CEEEEcCCCC----------------CCCCC
Confidence 688999999999999999999999988877 6666668886421 2333332211 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI 752 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv 752 (1023)
|+-=..+.+.+.-....++++||...|+.+-+++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 333334444444445779999999999999888876
|
HAD subfamilies caused by an overly broad single model. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.054 Score=54.38 Aligned_cols=102 Identities=22% Similarity=0.335 Sum_probs=67.8
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHH---HHHHHc---C--CCCCCCCCCCCeeeech-hhhccCHHHHHHH
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAK---AIALEC---G--ILGSDAEANDPNIIEGK-VFRALSDKEREKV 705 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~---~ia~~~---g--i~~~~~~~~~~~vi~g~-~~~~l~~~~~~~~ 705 (1023)
+|...+++++++++++++|++++++||+....+. ....++ | +.. ..++..+. .+..+..
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~------g~li~~~g~~~~~~~~------ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH------GPVLLSPDRLFAALHR------ 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC------ceEEEcCCcchhhhhc------
Confidence 5788999999999999999999999999999885 444442 2 321 11222211 1110100
Q ss_pred HhhceEeccCCHh-hHHHHHHHHHh-----CCCEEEEEcCCccCHHHhhhCCcc
Q 042091 706 AQEITVMGRSSPN-DKLLLVQALRK-----GGDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 706 ~~~~~v~ar~~P~-~K~~iV~~lq~-----~g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
.+. ...|+ .|...++.+++ ....++..||+.+|+.+-++++|-
T Consensus 93 ----e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 ----EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ----ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 112 23344 48888887777 346778899999999998877654
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.034 Score=59.49 Aligned_cols=95 Identities=9% Similarity=0.026 Sum_probs=67.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+-+...+...-+..|+.... ..++.+.+. .+..
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~iv~s~~~------------------~~~K 149 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL-----DLLLSTHTF------------------GYPK 149 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC-----CEEEEeeeC------------------CCCC
Confidence 67899999999999999999999999888888888888886421 133333222 1222
Q ss_pred H--hhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 717 P--NDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 717 P--~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
| +-=..+.+.+.-..+.++|+||+.+|+.+-+.|++..
T Consensus 150 P~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 150 EDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred CCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 3 2222222333333456999999999999999999963
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.038 Score=53.59 Aligned_cols=93 Identities=20% Similarity=0.157 Sum_probs=65.1
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCC--------HHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHh
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDN--------LQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQ 707 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~--------~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~ 707 (1023)
-++.|++.++++.|+++|+++.++|+.. ......+.+.+|+... ...+.+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~-~-------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID------VLYACP-H-------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE------EEEECC-C--------------
Confidence 3678999999999999999999999998 7778888888888521 011111 0
Q ss_pred hceEeccCCHhhHHHHHHHHH-hCCCEEEEEcC-CccCHHHhhhCCcc
Q 042091 708 EITVMGRSSPNDKLLLVQALR-KGGDVVAVTGD-GTNDAPALHEADIG 753 (1023)
Q Consensus 708 ~~~v~ar~~P~~K~~iV~~lq-~~g~~V~~iGD-G~ND~~aL~~Advg 753 (1023)
...-.|+-=..+++.++ -..+.++|+|| ..+|..+-+.+++-
T Consensus 83 ----~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 ----CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ----CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01222332234444442 34567999999 59999999988764
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.025 Score=63.40 Aligned_cols=108 Identities=15% Similarity=0.027 Sum_probs=76.0
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec
Q 042091 634 IKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 634 ~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a 713 (1023)
..+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..... .. +.|.+. ...+.+-.--.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f----~~-i~~~~~--------~~~~~~~~~~~ 250 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF----DD-LIGRPP--------DMHFQREQGDK 250 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch----hh-hhCCcc--------hhhhcccCCCC
Confidence 567999999999999999999999999999999999999998874111 00 011100 00000000012
Q ss_pred cCCHhhHHHHHHHHHh-CCCEEEEEcCCccCHHHhhhCCccE
Q 042091 714 RSSPNDKLLLVQALRK-GGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
+-.|+-+...++.+-. .-..++|+||..+|+.+-+.|++-.
T Consensus 251 kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 251 RPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 4556777777766543 2378999999999999999999874
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.022 Score=57.53 Aligned_cols=97 Identities=18% Similarity=0.243 Sum_probs=70.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++.|++.+.++.|++.|++++++|+..........+.+|+.... ..++...+... ...
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f-----~~i~~~~~~~~----------------~Kp 134 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF-----DEIISSDDVGS----------------RKP 134 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC-----SEEEEGGGSSS----------------STT
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc-----ccccccchhhh----------------hhh
Confidence 378999999999999999999999999999999999999987321 13333332210 112
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
.|+-=..+++.+.-..+.+++|||+..|..+-++|++-
T Consensus 135 ~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 135 DPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp SHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 22333344444444456799999999999999998864
|
... |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.027 Score=57.93 Aligned_cols=92 Identities=18% Similarity=0.260 Sum_probs=62.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+++|+++.++|+. ..+..+-+.+|+.... ..++.+... .+..
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f-----~~v~~~~~~------------------~~~k 142 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF-----DAIVDADEV------------------KEGK 142 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC-----CEeeehhhC------------------CCCC
Confidence 68999999999999999999999987 5677777888886321 122222211 1122
Q ss_pred HhhH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 042091 717 PNDK--LLLVQALRKGGDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 717 P~~K--~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
|... ....+.+.-..+.++++||+.+|..+-+.|++.
T Consensus 143 p~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 143 PHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred CChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 3211 222233322345688999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.044 Score=58.23 Aligned_cols=122 Identities=11% Similarity=0.078 Sum_probs=75.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++. +++.++|+-....+..+.+++|+.... ..++.+.+.. ..+-.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----d~i~~~~~~~----------------~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF-----DDIFVSEDAG----------------IQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc-----CEEEEcCccC----------------CCCCC
Confidence 5789999999999999 999999999999999999999986422 1222222110 01122
Q ss_pred HhhHHHHHHHH-HhCCCEEEEEcCCc-cCHHHhhhCCccE-EecC-CCCHHHHhccCccccCCChhHHHH
Q 042091 717 PNDKLLLVQAL-RKGGDVVAVTGDGT-NDAPALHEADIGL-AMGI-QGTEVAKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 717 P~~K~~iV~~l-q~~g~~V~~iGDG~-ND~~aL~~AdvgI-amg~-~g~~~ak~~adiil~~~~~~~i~~ 782 (1023)
|+-=...++.+ .-..+.+++|||+. +|..+=+.+++-. .... ...+.....+|.++. ++..+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHHh
Confidence 22223333434 32345699999998 8999999999633 2221 111112234566654 4555543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.088 Score=60.17 Aligned_cols=63 Identities=19% Similarity=0.242 Sum_probs=46.7
Q ss_pred hhHHHHHHHHHhC-C-----C-EEEEEcCCccCHHHhhh-----CCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 718 NDKLLLVQALRKG-G-----D-VVAVTGDGTNDAPALHE-----ADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 718 ~~K~~iV~~lq~~-g-----~-~V~~iGDG~ND~~aL~~-----AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.+|...|+.+.+. | . .++++||+.||..|++. +++||+|| ++.. ...|++.+. +-..+..+++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~--~t~A~y~L~--dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPK--ESNAFYSLR--DPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCC--CccceEEcC--CHHHHHHHHH
Confidence 4999998888764 2 1 25899999999999996 69999999 6543 235788876 5566666653
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.074 Score=54.23 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=72.9
Q ss_pred EEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCC-CHHHHHHHHHHcCCCCCCCC----CCCCeeeechhhhccCHHH
Q 042091 627 ILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGD-NLQTAKAIALECGILGSDAE----ANDPNIIEGKVFRALSDKE 701 (1023)
Q Consensus 627 ~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~~gi~~~~~~----~~~~~vi~g~~~~~l~~~~ 701 (1023)
......+-+-++.||+.+.++.|+++|+++.++|+- ....+..+-..+|+...... .....++.+.+.
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~------- 107 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKP------- 107 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCC-------
Confidence 455555566688999999999999999999999976 88899999999998521100 000111211110
Q ss_pred HHHHHhhceEeccCCHhhHHHHHHHHHhC------CCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 702 REKVAQEITVMGRSSPNDKLLLVQALRKG------GDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 702 ~~~~~~~~~v~ar~~P~~K~~iV~~lq~~------g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
. .|..=..+.+.+.+. -+.++|+||...|+.+-++|++-...-
T Consensus 108 -----------~--~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 108 -----------N--KAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred -----------c--hHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 0 011112334444332 357999999999999999998866543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.073 Score=59.16 Aligned_cols=118 Identities=17% Similarity=0.145 Sum_probs=74.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|++.|+++.++|+-+......+-+..+..... ....++.+.+.. ...-.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~---~~~~~v~~~~~~----------------~~KP~ 204 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERA---QGLDVFAGDDVP----------------KKKPD 204 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccccc---CceEEEeccccC----------------CCCCC
Confidence 58899999999999999999999999888887776655322110 001122332211 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCH--HHHhccCcccc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTE--VAKENSDIIIL 773 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~--~ak~~adiil~ 773 (1023)
|+-=..+.+.+.-....++||||+.+|..+-+.|++.......|.. .....+|+++.
T Consensus 205 p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 205 PDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred HHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 3333444444544456799999999999999999987554323221 11235777765
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.067 Score=62.01 Aligned_cols=97 Identities=20% Similarity=0.187 Sum_probs=67.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHH-HcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIAL-ECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~-~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
++.||+.+.++.|++.|+++.++|+.....+...-+ ..|+.... ..++.+++.. ...-
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F-----d~ii~~d~v~----------------~~KP 151 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF-----SVIVGGDEVE----------------KGKP 151 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC-----CEEEehhhcC----------------CCCC
Confidence 577999999999999999999999998888776655 57775321 2344444321 1122
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
.|+-=..+++.+.-..+.++|+||+.+|..+-+.|++..
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~ 190 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEV 190 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 233323334444334567999999999999999999864
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.1 Score=55.60 Aligned_cols=124 Identities=12% Similarity=0.112 Sum_probs=76.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+ +|+++.++|......+...-+..|+...- ..++.+.+.. ...-.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~v~~~~~~~----------------~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-----DLLVISEQVG----------------VAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-----CEEEEECccC----------------CCCCC
Confidence 47899999999999 68999999999888888888888886421 1233332211 01112
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCc-cCHHHhhhCCcc-EEecCCCCH-HHHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKG-GDVVAVTGDGT-NDAPALHEADIG-LAMGIQGTE-VAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~-g~~V~~iGDG~-ND~~aL~~Advg-Iamg~~g~~-~ak~~adiil~~~~~~~i~~~i 784 (1023)
|+-=..+++.+.-. .+.+++|||+. +|+.+=+.|++- |.+...+.. .....+|+++. ++..+..++
T Consensus 153 p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 153 VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 22222233333211 25699999998 799999999985 333311211 11124677775 566666554
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.09 Score=53.60 Aligned_cols=85 Identities=22% Similarity=0.182 Sum_probs=60.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCC-HHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDN-LQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~-~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+... +...
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~--------------------------------~~~~ 90 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL--------------------------------PHAV 90 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE--------------------------------cCCC
Confidence 678999999999999999999999988 6777888888887520 0112
Q ss_pred CH--hhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCcc
Q 042091 716 SP--NDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIG 753 (1023)
Q Consensus 716 ~P--~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~Advg 753 (1023)
.| +-=..+.+.+.-..+.++||||.. .|..+-+.|++-
T Consensus 91 KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 91 KPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred CCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 23 211222222222345699999998 799999999874
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.12 Score=51.29 Aligned_cols=98 Identities=21% Similarity=0.206 Sum_probs=59.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCH---------------HHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHH
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNL---------------QTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKE 701 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~ 701 (1023)
++.||+.++++.|+++|+++.++|.... ..+..+.+.+|+.... .+.+.....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~----- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-------VLFCPHHPA----- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-------EEECCCCCC-----
Confidence 4789999999999999999999998763 4556667778875210 000000000
Q ss_pred HHHHHhhceEeccCCHhhH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 702 REKVAQEITVMGRSSPNDK--LLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 702 ~~~~~~~~~v~ar~~P~~K--~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
.-.....|.-+ ..+++.+.-..+.++||||...|..+-+.+++-.
T Consensus 95 --------~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 95 --------DNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred --------CCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 00000123211 2222223223466999999999999988888753
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.15 Score=50.35 Aligned_cols=108 Identities=19% Similarity=0.242 Sum_probs=76.0
Q ss_pred HHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCC
Q 042091 597 VDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGI 676 (1023)
Q Consensus 597 ~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi 676 (1023)
.+.+..+|++.+.+- -|-|+++.= ....-|++++-++.++++|+++.++|.-++..+..+++.+|+
T Consensus 20 ~~~L~~~Gikgvi~D------------lDNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 20 PDILKAHGIKGVILD------------LDNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred HHHHHHcCCcEEEEe------------ccCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 456777888887765 233444432 235678899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhC---CCEEEEEcCCc-cCHHHhhhCC
Q 042091 677 LGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKG---GDVVAVTGDGT-NDAPALHEAD 751 (1023)
Q Consensus 677 ~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~---g~~V~~iGDG~-ND~~aL~~Ad 751 (1023)
.. ++--..|-.+ .+-+++++. -+.|+||||.. -|+-+=+.|+
T Consensus 86 ~f--------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 86 PF--------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred ce--------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 73 2222334433 344555554 57899999984 4766544443
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.13 Score=53.92 Aligned_cols=95 Identities=13% Similarity=0.108 Sum_probs=60.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++-||+.++++.|+++|+++.++|+-.. ......+.+|+.... ..++...+.. ...-+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l~~~f-----d~i~~s~~~~----------------~~KP~ 162 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGLLEYF-----DFVVTSYEVG----------------AEKPD 162 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCcHHhc-----ceEEeecccC----------------CCCCC
Confidence 5789999999999999999999997654 346677778875321 1222222110 01122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCcc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIG 753 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~Advg 753 (1023)
|+-=..+++.+.-....++||||+. +|+.+-++|++-
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 163 PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 2211222233332346799999997 899988888753
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.19 Score=54.78 Aligned_cols=86 Identities=17% Similarity=0.194 Sum_probs=58.9
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHH---HHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceE
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQT---AKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITV 711 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v 711 (1023)
..++-|++.+.++.+++.|+++.++|+..... +...-+..|+..... . .+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~---d------------------------~l 168 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE---E------------------------HL 168 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc---c------------------------eE
Confidence 34678999999999999999999999987443 345556778863211 0 12
Q ss_pred eccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHh
Q 042091 712 MGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747 (1023)
Q Consensus 712 ~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL 747 (1023)
+.|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 169 llr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 169 LLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred EeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 333222345555556655556799999999998653
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.69 Score=52.59 Aligned_cols=47 Identities=19% Similarity=0.133 Sum_probs=38.7
Q ss_pred CCcEEEeeeeccC--CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHH
Q 042091 624 EELILLAIVGIKD--PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIA 671 (1023)
Q Consensus 624 ~~l~~lG~i~~~D--~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia 671 (1023)
-|.||+-++.-.| .+-++..++|++|. .|+.+.++||+.......+.
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 5677776665434 47789999999999 78999999999999999884
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.24 Score=50.69 Aligned_cols=28 Identities=25% Similarity=0.296 Sum_probs=24.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCH
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNL 664 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~ 664 (1023)
++.|++.++++.|+++|+++.++|.-+.
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3578999999999999999999997663
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.22 Score=49.49 Aligned_cols=91 Identities=21% Similarity=0.258 Sum_probs=58.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
+..+|+.+.++.|++.|+++.++|+-....+....+.. +.... ..++..... .....
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f-----~~i~~~~~~-----------------~~Kp~ 120 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF-----DLILGSDEF-----------------GAKPE 120 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC-----cEEEecCCC-----------------CCCcC
Confidence 44589999999999999999999999999988887775 33211 112111111 11122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEAD 751 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Ad 751 (1023)
|+-=..+.+.+.-.. .++++||+.+|..+-+.|+
T Consensus 121 ~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 121 PEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 222222223332224 7999999999999877764
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.19 Score=53.41 Aligned_cols=98 Identities=15% Similarity=0.253 Sum_probs=60.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHH-HHHHcCCCCCCCCCCCCeeeech--hhhccCHHHHHHHHhhceEec
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKA-IALECGILGSDAEANDPNIIEGK--VFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~-ia~~~gi~~~~~~~~~~~vi~g~--~~~~l~~~~~~~~~~~~~v~a 713 (1023)
++.||+.+.++.|++.|+++.++||-....... ..+..++... ...++.+. +.. ..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-----f~~i~~~~~~~~~----------------~~ 136 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-----MHHVVTGDDPEVK----------------QG 136 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-----CCEEEECChhhcc----------------CC
Confidence 578999999999999999999999977654432 2222233321 11233333 110 01
Q ss_pred cCCHhhHHHHHHHHH---hCCCEEEEEcCCccCHHHhhhCCccEE
Q 042091 714 RSSPNDKLLLVQALR---KGGDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq---~~g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
.-.|+-=...++.+. -..+.++||||+..|+.+-+.|++-..
T Consensus 137 KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 137 KPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 122322233444443 224679999999999999999998543
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.31 Score=52.11 Aligned_cols=103 Identities=21% Similarity=0.278 Sum_probs=68.8
Q ss_pred CCcccHHHHHHHH--HhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHH-HhhceEec
Q 042091 637 PCRPGVKDAVKLC--RDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKV-AQEITVMG 713 (1023)
Q Consensus 637 ~lr~~~~~~I~~l--~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~-~~~~~v~a 713 (1023)
|+.|+.+++++.+ ++.|+.++++|--|..--..+=+.-|+..... .+.+.+..-. ++-...+ ..+.+-+.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~-----~I~TNpa~~~--~~G~l~v~pyh~h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFS-----EIFTNPACFD--ADGRLRVRPYHSHGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccc-----eEEeCCceec--CCceEEEeCccCCCCC
Confidence 7889999999999 56899999999999999999999999874321 1121111000 0000000 00001234
Q ss_pred cCCH-hhHHHHHHHHHhC----C---CEEEEEcCCccCHHH
Q 042091 714 RSSP-NDKLLLVQALRKG----G---DVVAVTGDGTNDAPA 746 (1023)
Q Consensus 714 r~~P-~~K~~iV~~lq~~----g---~~V~~iGDG~ND~~a 746 (1023)
+|.| .=|..+++.+++. | ..|.++|||.||-..
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp 184 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCP 184 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCc
Confidence 5544 4799999888775 4 689999999999764
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.091 Score=52.21 Aligned_cols=93 Identities=15% Similarity=-0.009 Sum_probs=66.3
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
-++|||+.+.++.|+ .++++.++|.-+...+..+-+.+|+.... ...++.+++. .+.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~----f~~i~~~~d~------------------~~~ 100 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF----GYRRLFRDEC------------------VFV 100 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE----eeeEEECccc------------------ccc
Confidence 368999999999999 57999999999999999999999885311 1223333332 112
Q ss_pred CHhhHHHHHHHHHh---CCCEEEEEcCCccCHHHhhhCCccEE
Q 042091 716 SPNDKLLLVQALRK---GGDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~---~g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
.|. +.+.++. ..+.+.++||..+|..+-++|+|-|.
T Consensus 101 KP~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 101 KGK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred CCe----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 232 4444443 35679999999999998777766553
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.25 Score=62.88 Aligned_cols=51 Identities=18% Similarity=0.145 Sum_probs=38.6
Q ss_pred CCcEEEeeeeccCCCcccHHHHHHHH-HhCCCEEEEECCCCHHHHHHHHHHc
Q 042091 624 EELILLAIVGIKDPCRPGVKDAVKLC-RDAGVKVRMVTGDNLQTAKAIALEC 674 (1023)
Q Consensus 624 ~~l~~lG~i~~~D~lr~~~~~~I~~l-~~aGi~v~mlTGD~~~ta~~ia~~~ 674 (1023)
-|.|++-.....-.+.++..+++++| ++.|+.|.++||+...+....-..+
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 45555533322335668999999997 7889999999999999998877543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.54 Score=50.87 Aligned_cols=94 Identities=14% Similarity=0.142 Sum_probs=60.0
Q ss_pred eeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHH--HHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHh
Q 042091 630 AIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAK--AIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQ 707 (1023)
Q Consensus 630 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~--~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~ 707 (1023)
|.+.-.+.+-|++.++++.|+++|+++.++|.-....+. ...+++|+..+. ...+++..+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~----~~~Ii~s~~~------------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL----PEMIISSGEI------------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc----cceEEccHHH-------------
Confidence 444456778999999999999999999999996554443 556788886311 1122222211
Q ss_pred hceEeccCCHhhHHHHHHHHHh---CCCEEEEEcCCccCHHHhhhCC
Q 042091 708 EITVMGRSSPNDKLLLVQALRK---GGDVVAVTGDGTNDAPALHEAD 751 (1023)
Q Consensus 708 ~~~v~ar~~P~~K~~iV~~lq~---~g~~V~~iGDG~ND~~aL~~Ad 751 (1023)
...-+.+.+++ .+..+.++||+.+|...+..++
T Consensus 80 -----------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 -----------AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -----------HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 01112222232 2467999999999998886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.38 Score=51.09 Aligned_cols=87 Identities=17% Similarity=0.171 Sum_probs=57.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHH---HHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQT---AKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
-|.-|++.++++.+++.|++|+++||+.... +..--++.|+..- ..+++.+..-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-----~~LiLR~~~d------------------ 175 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-----KHLILRGLED------------------ 175 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-----CeeeecCCCC------------------
Confidence 3888999999999999999999999999765 3233345676531 1122222100
Q ss_pred ccCC-HhhHHHHHHHHHhCCC-EEEEEcCCccCHH
Q 042091 713 GRSS-PNDKLLLVQALRKGGD-VVAVTGDGTNDAP 745 (1023)
Q Consensus 713 ar~~-P~~K~~iV~~lq~~g~-~V~~iGDG~ND~~ 745 (1023)
.+.+ -+-|.+.-+.+.+.|+ +++.+||-.+|..
T Consensus 176 ~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 176 SNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred CCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 0111 1227777777777776 5678999998873
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.2 Score=50.61 Aligned_cols=96 Identities=20% Similarity=0.089 Sum_probs=59.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCC---------------HHHHHHHHHHcCCCCCCCCCCCCeeee----chhhhcc
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDN---------------LQTAKAIALECGILGSDAEANDPNIIE----GKVFRAL 697 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~---------------~~ta~~ia~~~gi~~~~~~~~~~~vi~----g~~~~~l 697 (1023)
++-|++.++++.|+++|+++.++|.-. ...+..+.+++|+.-. ..++. .++.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd------~ii~~~~~~~~~~--- 99 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD------DVLICPHFPDDNC--- 99 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee------EEEECCCCCCCCC---
Confidence 467899999999999999999999742 3456666777777510 01111 0110
Q ss_pred CHHHHHHHHhhceEeccCCHhh--HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe
Q 042091 698 SDKEREKVAQEITVMGRSSPND--KLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM 756 (1023)
Q Consensus 698 ~~~~~~~~~~~~~v~ar~~P~~--K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIam 756 (1023)
....|.. =..+++.+.-....+.||||+.+|..+-+.|++-...
T Consensus 100 ---------------~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 100 ---------------DCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ---------------CCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0112321 1122222222235699999999999999999887543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.76 E-value=0.14 Score=55.57 Aligned_cols=68 Identities=18% Similarity=0.149 Sum_probs=50.7
Q ss_pred ccCCHhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhC--------CccEEecCCCCHHHHhccCccccCCChhHH
Q 042091 713 GRSSPNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEA--------DIGLAMGIQGTEVAKENSDIIILDDNFASV 780 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~A--------dvgIamg~~g~~~ak~~adiil~~~~~~~i 780 (1023)
.+..+.+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+ .+. .+..|++++. +...+
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~--~~~~v 235 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLT--GPQQV 235 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCC--CHHHH
Confidence 345577898888887664 34799999999999999999 5888885 332 3567898887 56666
Q ss_pred HHHHH
Q 042091 781 VKVVR 785 (1023)
Q Consensus 781 ~~~i~ 785 (1023)
...++
T Consensus 236 ~~~L~ 240 (244)
T TIGR00685 236 LEFLG 240 (244)
T ss_pred HHHHH
Confidence 66553
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=92.44 E-value=1.8 Score=47.24 Aligned_cols=41 Identities=34% Similarity=0.347 Sum_probs=33.7
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHH---HHHHHHHcCCCC
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQT---AKAIALECGILG 678 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~gi~~ 678 (1023)
+=|++.++|+.|+++|++++++||.+..+ .....+++|+..
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 78899999999999999999999977776 444455678753
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.42 E-value=0.3 Score=51.95 Aligned_cols=97 Identities=11% Similarity=0.096 Sum_probs=64.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.| ++++.++|+.....+...-+..|+...-. ..++.+.+... .+-.
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~----~~v~~~~~~~~----------------~KP~ 144 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP----DKLFSGYDIQR----------------WKPD 144 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc----ceEeeHHhcCC----------------CCCC
Confidence 5678999999998 48999999999888888878888864211 13444433210 1122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM 756 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIam 756 (1023)
|+-=....+.+.-..+.++|+||..+|..+=++|++....
T Consensus 145 p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 145 PALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 2222333333333345689999999999999999987753
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.39 Score=62.88 Aligned_cols=136 Identities=18% Similarity=0.200 Sum_probs=87.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
.+.||+.+.++.|+++|+++.++|+-....+..+-++.|+.... ...++.+++... ..-.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~----Fd~iv~~~~~~~----------------~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM----FDAIVSADAFEN----------------LKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH----CCEEEECccccc----------------CCCC
Confidence 36799999999999999999999999999999888999985211 123444433210 1122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecCCC---CHHHHhccCccccCCChhHHHHHHHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMGIQG---TEVAKENSDIIILDDNFASVVKVVRWGRSVFA 792 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg~~g---~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~ 792 (1023)
|+-=....+.+.-..+.++++||..+|+.+-+.|++- |.+. .+ .+.....+|+++.+-.--++..++..|-..+.
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~-~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~ 299 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVT-TTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATP 299 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCC
Confidence 3222334444444456799999999999999999883 3333 22 22344567888764433345555554444444
Q ss_pred h
Q 042091 793 N 793 (1023)
Q Consensus 793 ~ 793 (1023)
|
T Consensus 300 ~ 300 (1057)
T PLN02919 300 N 300 (1057)
T ss_pred C
Confidence 3
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=92.37 E-value=0.34 Score=46.83 Aligned_cols=39 Identities=8% Similarity=0.108 Sum_probs=34.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCC-CHHHHHHHHHHcC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGD-NLQTAKAIALECG 675 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~~g 675 (1023)
++.+|+.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777777766
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.32 Score=51.70 Aligned_cols=99 Identities=12% Similarity=0.108 Sum_probs=65.4
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcC---CCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceE
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECG---ILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITV 711 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~g---i~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v 711 (1023)
+-++.||+.++++.|+++|+++.++|..+......+-+..+ +..... ..++. .+
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~-----~~fd~------------------~~ 149 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFS-----GYFDT------------------TV 149 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcc-----eEEEe------------------Cc
Confidence 34799999999999999999999999998887777665542 221000 00100 11
Q ss_pred eccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe
Q 042091 712 MGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM 756 (1023)
Q Consensus 712 ~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIam 756 (1023)
...-.|+-=..+.+.+.-..+.++++||...|+.+-++|++-...
T Consensus 150 g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 150 GLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred ccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 112233332344444443446799999999999999999986543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=92.02 E-value=0.25 Score=52.13 Aligned_cols=97 Identities=18% Similarity=0.186 Sum_probs=57.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHH--HHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQT--AKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR 714 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t--a~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar 714 (1023)
++.|++.+.++.|+++|+++.++|...... ........++.... ..++...+.. ...
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-----d~v~~s~~~~----------------~~K 152 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-----DAVVESCLEG----------------LRK 152 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-----CEEEEeeecC----------------CCC
Confidence 678999999999999999999999875433 22222233442211 1122111110 012
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
-.|+-=..+.+.+.-....++||||...|+.+=++|++-.
T Consensus 153 P~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 153 PDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 2233223333333333456899999999999999998853
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.58 E-value=0.54 Score=53.53 Aligned_cols=97 Identities=25% Similarity=0.182 Sum_probs=59.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCC---------------CHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHH
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGD---------------NLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKE 701 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD---------------~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~ 701 (1023)
++.|++.++++.|+++|+++.++|.- ....+..+.+..|+... ...+...... +
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd------~i~i~~~~~s---d-- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD------EVLICPHFPE---D-- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee------eEEEeCCcCc---c--
Confidence 68999999999999999999999982 23345566677777410 1111100000 0
Q ss_pred HHHHHhhceEeccCCHhhHHHHHHHH-Hh---CCCEEEEEcCCccCHHHhhhCCccEE
Q 042091 702 REKVAQEITVMGRSSPNDKLLLVQAL-RK---GGDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 702 ~~~~~~~~~v~ar~~P~~K~~iV~~l-q~---~g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
...+| .|. ..++..+ ++ ....+.||||+.+|..+-+.|++-..
T Consensus 99 --------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 --------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred --------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00111 222 2233222 22 24679999999999999999988754
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=91.56 E-value=1.3 Score=48.13 Aligned_cols=39 Identities=31% Similarity=0.352 Sum_probs=33.7
Q ss_pred hhHHHHHHHHHhCCCEEEEEcC----CccCHHHhhh-CCccEEec
Q 042091 718 NDKLLLVQALRKGGDVVAVTGD----GTNDAPALHE-ADIGLAMG 757 (1023)
Q Consensus 718 ~~K~~iV~~lq~~g~~V~~iGD----G~ND~~aL~~-AdvgIamg 757 (1023)
.+|..-++.|+ ....|+++|| |.||.+||+. --.|+++.
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 48888888888 6778999999 8999999997 67788875
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=91.49 E-value=0.66 Score=46.84 Aligned_cols=81 Identities=17% Similarity=0.143 Sum_probs=63.2
Q ss_pred cCCCcccHHHHHHHHHhCCC--EEEEECCC-------CHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHH
Q 042091 635 KDPCRPGVKDAVKLCRDAGV--KVRMVTGD-------NLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKV 705 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi--~v~mlTGD-------~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~ 705 (1023)
++.+-|+..+.+++|++.+. +|.++|-- +...|..+++.+|+.-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------------------------- 109 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------------------------- 109 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE---------------------------
Confidence 56788999999999999987 49999986 4889999999999861
Q ss_pred HhhceEeccCCHhhHHHHHHHHHhC-----CCEEEEEcCCc-cCHHH
Q 042091 706 AQEITVMGRSSPNDKLLLVQALRKG-----GDVVAVTGDGT-NDAPA 746 (1023)
Q Consensus 706 ~~~~~v~ar~~P~~K~~iV~~lq~~-----g~~V~~iGDG~-ND~~a 746 (1023)
-.+..-.|.-..++.+.++.+ -+.++||||-. -|+-+
T Consensus 110 ----l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 110 ----LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred ----EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 113345787777888888765 56799999973 35554
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.93 E-value=0.82 Score=46.38 Aligned_cols=94 Identities=11% Similarity=0.016 Sum_probs=57.3
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHH------------HHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHH
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQ------------TAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKV 705 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~------------ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~ 705 (1023)
+-||+.++++.|+++|+++.++|.-... .+..+.+.+|+.. ..++.+....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~-------~~ii~~~~~~---------- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI-------QVLAATHAGL---------- 105 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE-------EEEEecCCCC----------
Confidence 4489999999999999999999975442 4566778888742 1122111100
Q ss_pred HhhceEeccCCHhhHHHHHHHHH--hCCCEEEEEcCCc--------cCHHHhhhCCccE
Q 042091 706 AQEITVMGRSSPNDKLLLVQALR--KGGDVVAVTGDGT--------NDAPALHEADIGL 754 (1023)
Q Consensus 706 ~~~~~v~ar~~P~~K~~iV~~lq--~~g~~V~~iGDG~--------ND~~aL~~AdvgI 754 (1023)
...-.|+-=..+.+.+. -..+.++||||.. +|..+-++|++-.
T Consensus 106 ------~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 106 ------YRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ------CCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 00111222122333332 2235699999986 6998888887654
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=90.53 E-value=0.51 Score=43.55 Aligned_cols=49 Identities=20% Similarity=0.265 Sum_probs=36.3
Q ss_pred eeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHH---HHcCCCC
Q 042091 630 AIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIA---LECGILG 678 (1023)
Q Consensus 630 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~~gi~~ 678 (1023)
|++...+.+=|++.++|+.|+++|++++++|-....+...++ +++|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 445557788899999999999999999999998866655555 5567763
|
... |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.47 E-value=2 Score=46.59 Aligned_cols=48 Identities=19% Similarity=0.268 Sum_probs=41.0
Q ss_pred eeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHc---CCC
Q 042091 630 AIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALEC---GIL 677 (1023)
Q Consensus 630 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~---gi~ 677 (1023)
|.+.-.+.+-|++.++++.|+++|++++++|+....+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 445556678899999999999999999999999999888888874 663
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.41 E-value=2 Score=44.01 Aligned_cols=52 Identities=29% Similarity=0.364 Sum_probs=44.2
Q ss_pred EEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH---cCCCC
Q 042091 627 ILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE---CGILG 678 (1023)
Q Consensus 627 ~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~---~gi~~ 678 (1023)
.+-|.+.++|..-|++.||++.|++++.+|..+|.-..+.-..+.++ ||+.-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 46799999999999999999999999999999988777776666655 56653
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.94 E-value=0.76 Score=48.00 Aligned_cols=95 Identities=17% Similarity=0.141 Sum_probs=58.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH-cCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE-CGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
++.|++.++++.|+++|+++.++|.-+.......-.. .++... ...++...+. ...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-----fd~v~~s~~~------------------~~~ 140 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-----ADHIYLSQDL------------------GMR 140 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-----cCEEEEeccc------------------CCC
Confidence 4789999999999999999999999776654432222 233211 0112222211 112
Q ss_pred CH--hhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 716 SP--NDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 716 ~P--~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
.| +-=..+++.+.-..+.++++||...|+.+-++|++-.
T Consensus 141 KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 141 KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 23 2222333333333466899999999999999998854
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=89.85 E-value=0.85 Score=51.58 Aligned_cols=95 Identities=9% Similarity=0.062 Sum_probs=67.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH----cCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE----CGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~----~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
++.++++++++.|+++|+.+.++|.-+...+..+-+. +|+...-. .+ .+-
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~------~~--------------------~~~ 84 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD------AR--------------------SIN 84 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee------EE--------------------EEe
Confidence 4578999999999999999999999999999999888 77753110 00 011
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
....|+.=..+.+.+.-.-..++|+||...|..+.+.+...+.+.
T Consensus 85 ~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 85 WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 122233333333333333467999999999999999988876543
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=89.82 E-value=4.6 Score=48.30 Aligned_cols=156 Identities=10% Similarity=0.013 Sum_probs=86.9
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH-cCCCCCCC---CCCCCeeeechhhhccCHHHHHHHHhhceEec
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE-CGILGSDA---EANDPNIIEGKVFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-~gi~~~~~---~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a 713 (1023)
+++++.+.+ ++.|.+ +++|+-...-++.+|++ +|++.--. +....-.++|.-.. .
T Consensus 111 l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----------------~ 169 (497)
T PLN02177 111 VHPETWRVF---NSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----------------P 169 (497)
T ss_pred cCHHHHHHH---HhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----------------C
Confidence 666655544 567754 99999999999999988 89973100 00001122222100 0
Q ss_pred -cCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHH
Q 042091 714 -RSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFA 792 (1023)
Q Consensus 714 -r~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~ 792 (1023)
.+.-++|.+-++..........+-||+.||.|||+.|+-+.+++.+. . . -+..+.. --.-+.+-||-.++
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~--~----~--~~~~~~~-~~~~~fhdgrl~~~ 240 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTK--C----E--PLPRNKL-LSPVIFHEGRLVQR 240 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCC--C----C--cCCcccC-CCceeeeCCcccCC
Confidence 13556788777643321222368899999999999999999998311 1 0 0111111 01122355777777
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 042091 793 NIQKFIQFQLTVNVAALLINVVAAISSGDVP 823 (1023)
Q Consensus 793 ~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~p 823 (1023)
=.-......+.+-=+.+++.++-.+.+...|
T Consensus 241 p~~~~~l~~~~~~p~g~~l~~~r~~~~~~lp 271 (497)
T PLN02177 241 PTPLVALLTFLWMPIGFILSLLRVYLNIPLP 271 (497)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Confidence 5555555555544444444444444443333
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.72 E-value=1.6 Score=45.21 Aligned_cols=113 Identities=22% Similarity=0.261 Sum_probs=73.6
Q ss_pred CCcccHHHHHHHHHhCCC-EEEEECCCCHHHHHHHHHHcCCCCCC---------CCCCCCeeeechhhhccCHHHHHHHH
Q 042091 637 PCRPGVKDAVKLCRDAGV-KVRMVTGDNLQTAKAIALECGILGSD---------AEANDPNIIEGKVFRALSDKEREKVA 706 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~~gi~~~~---------~~~~~~~vi~g~~~~~l~~~~~~~~~ 706 (1023)
|.-|+..++|+.+++.|. .++++|--|.--...+-+..|+..-- .+.++.+.+..-. +
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH----~-------- 151 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYH----T-------- 151 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCC----C--------
Confidence 788999999999999997 99999999998888888888875310 0111112211100 0
Q ss_pred hhceEeccCCHh-hHHHHHHHHHhCC-------CEEEEEcCCccCH-HHhhhCCccEEecCCCCHH
Q 042091 707 QEITVMGRSSPN-DKLLLVQALRKGG-------DVVAVTGDGTNDA-PALHEADIGLAMGIQGTEV 763 (1023)
Q Consensus 707 ~~~~v~ar~~P~-~K~~iV~~lq~~g-------~~V~~iGDG~ND~-~aL~~AdvgIamg~~g~~~ 763 (1023)
-+=+.+|-|. =|..++..++..+ +.+.++|||.||. |+++...--+||-..|-+.
T Consensus 152 --~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 152 --QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred --CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 0112333222 4777776665432 3789999999995 5777776667776555444
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=88.63 E-value=4.7 Score=43.76 Aligned_cols=47 Identities=11% Similarity=0.048 Sum_probs=38.9
Q ss_pred eccCCCcccHHHHHHHHHhCCCEEEEECC---CCHHHHHHHHHHcCCCCC
Q 042091 633 GIKDPCRPGVKDAVKLCRDAGVKVRMVTG---DNLQTAKAIALECGILGS 679 (1023)
Q Consensus 633 ~~~D~lr~~~~~~I~~l~~aGi~v~mlTG---D~~~ta~~ia~~~gi~~~ 679 (1023)
.-.+.+=|++.++|++|+++|++++++|| ..........+++|+...
T Consensus 13 ~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 13 YKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred EcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 34456667999999999999999999996 778888888888998654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=88.04 E-value=1.5 Score=49.45 Aligned_cols=48 Identities=19% Similarity=0.290 Sum_probs=38.8
Q ss_pred eeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHH---HHcCCC
Q 042091 630 AIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIA---LECGIL 677 (1023)
Q Consensus 630 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~~gi~ 677 (1023)
|.+--.+.+=|++.++|+.|+++|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 333444566799999999999999999999999988777777 557774
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.72 E-value=1.5 Score=45.13 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=63.1
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCH
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSP 717 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P 717 (1023)
+-|+ .+.++.|++. +++.++||.....+..+-+..|+.... ..++.+++.. ..+-.|
T Consensus 89 ~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f-----d~i~~~~~~~----------------~~KP~p 145 (188)
T PRK10725 89 PLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF-----DAVVAADDVQ----------------HHKPAP 145 (188)
T ss_pred CccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc-----eEEEehhhcc----------------CCCCCh
Confidence 3454 6899999875 899999999999999999999986421 2344433321 112223
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 718 NDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 718 ~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
+-=....+.++-....+.++||..+|+.+=+.|++-.
T Consensus 146 ~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 146 DTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 3333333444333456889999999999999998753
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=86.84 E-value=2 Score=44.67 Aligned_cols=93 Identities=16% Similarity=0.081 Sum_probs=55.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|++.+ +.+++|.-+.......-+.+|+...... ....++.+.. ..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~-~f~~i~~~~~---------------------~~ 130 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPG-AFSEVLMCGH---------------------DE 130 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCC-cccEEEEecc---------------------Cc
Confidence 47899999999999985 5666676554444445556666421110 0012222221 11
Q ss_pred HhhHHHHHH-HHHhCC-CEEEEEcCCccCHHHhhhC--CccE
Q 042091 717 PNDKLLLVQ-ALRKGG-DVVAVTGDGTNDAPALHEA--DIGL 754 (1023)
Q Consensus 717 P~~K~~iV~-~lq~~g-~~V~~iGDG~ND~~aL~~A--dvgI 754 (1023)
| |.+++. .+++.| +.++++||..+|..+-++| ++-.
T Consensus 131 ~--kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 131 S--KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred c--cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 2 223332 333333 4588999999999999999 8854
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=86.07 E-value=2.2 Score=43.80 Aligned_cols=98 Identities=10% Similarity=0.028 Sum_probs=64.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.+++.++++.|+ .++.++|.-+...+..+.+.+|+.... ..++.+++...- ...+.-.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-----d~i~~~~~~~~~------------~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-----DGIFCFDTANPD------------YLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-----CeEEEeecccCc------------cCCCCCC
Confidence 47789999999998 478999999999999999999986421 123333222100 0001222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
|+-=..+++.+....+.++|+||...|..+=+.|++..
T Consensus 144 p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 144 PQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 33223444444444567899999999999888887653
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=85.76 E-value=5.6 Score=39.68 Aligned_cols=103 Identities=20% Similarity=0.248 Sum_probs=69.6
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH---c-----CCCCCCCCCCCCeeeechhh-hccCHHHHHHH
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE---C-----GILGSDAEANDPNIIEGKVF-RALSDKEREKV 705 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~---~-----gi~~~~~~~~~~~vi~g~~~-~~l~~~~~~~~ 705 (1023)
+|..++++.+..+.+++.|++++.+|++..--+...-.- . ++.. +.+......+ ..+..
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~------Gpv~~sP~~l~~al~r------ 92 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD------GPVLLSPDSLFSALHR------ 92 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC------CCEEECCcchhhhhhc------
Confidence 479999999999999999999999999997655443322 2 3322 2222221111 11111
Q ss_pred HhhceEeccCCHhhHHHHHHHHHhC-----CCEEEEEcCCccCHHHhhhCCcc
Q 042091 706 AQEITVMGRSSPNDKLLLVQALRKG-----GDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 706 ~~~~~v~ar~~P~~K~~iV~~lq~~-----g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
.+..+-.-+.|...++.++.. ...++..|...+|+.+-++++|-
T Consensus 93 ----Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 ----EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ----cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 234455567898888888864 44678889999999998887664
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=84.48 E-value=8.3 Score=43.84 Aligned_cols=63 Identities=17% Similarity=0.217 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHhC-C------CEEEEEcCCccCHHHhhhC-----CccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 718 NDKLLLVQALRKG-G------DVVAVTGDGTNDAPALHEA-----DIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 718 ~~K~~iV~~lq~~-g------~~V~~iGDG~ND~~aL~~A-----dvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
-+|...|+.+.+. + ..++++||-..|-.|++.. ++||-+| .+.. ...|++.+. +-..+..+++
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~--dp~eV~~~L~ 342 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQ--EPDEVMEFLE 342 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCC--CHHHHHHHHH
Confidence 3899998888764 2 2489999999999998753 6777776 3221 235788887 5566666653
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.81 E-value=6.6 Score=40.20 Aligned_cols=98 Identities=28% Similarity=0.298 Sum_probs=62.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHh-----hceE
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQ-----EITV 711 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~-----~~~v 711 (1023)
.+.+++.+++..++++|++++|+|- +-||... -.++..+..++..-...+.. ....
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rg--------yf~~~~f~~~~~~m~~~l~~~gv~id~i~ 91 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRG--------YFTEADFDKLHNKMLKILASQGVKIDGIL 91 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEEC-----------CCCcccc--------CccHHHHHHHHHHHHHHHHHcCCccceEE
Confidence 3678999999999999999999985 4455432 12233333332211111111 1124
Q ss_pred eccCCHhh--------HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 042091 712 MGRSSPND--------KLLLVQALRKGG---DVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 712 ~ar~~P~~--------K~~iV~~lq~~g---~~V~~iGDG~ND~~aL~~Advg 753 (1023)
+|.-.|++ ...+.+.+++.+ ....||||...|..+-..|++.
T Consensus 92 ~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 92 YCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 55555553 455666666664 6789999999999988888776
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.03 E-value=4.8 Score=42.84 Aligned_cols=99 Identities=17% Similarity=0.240 Sum_probs=74.9
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++.||+.+.++.|++.|+.+.+.|+-....+..+.+..|+.... ..++++.+... ..-
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f-----~~~v~~~dv~~----------------~KP 143 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF-----DVIVTADDVAR----------------GKP 143 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc-----chhccHHHHhc----------------CCC
Confidence 379999999999999999999999999999999999999998642 23444444321 123
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
.|+-=+.-.+.|.-....+.++.|..|.+.|-++|+.-+-
T Consensus 144 ~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 144 APDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred CCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 4444444455554456678999999999999999987653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1023 | ||||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 3e-61 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 8e-61 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-60 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-60 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-59 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-59 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-55 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-53 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 3e-28 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 2e-27 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 5e-11 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 3e-09 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 5e-09 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 4e-08 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 4e-08 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 4e-07 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 5e-07 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 8e-07 | ||
| 4aqr_D | 57 | Crystal Structure Of A Calmodulin In Complex With T | 2e-06 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 2e-04 |
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|4AQR|D Chain D, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 57 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1023 | |||
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-173 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-168 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 6e-31 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-29 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 5e-09 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 1e-29 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-29 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-28 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 9e-09 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-27 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-09 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 2e-19 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-05 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-10 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 6e-08 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-07 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 5e-07 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 3e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 4e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-04 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 3e-04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 4e-04 |
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 623 bits (1608), Expect = 0.0
Identities = 241/1028 (23%), Positives = 399/1028 (38%), Gaps = 149/1028 (14%)
Query: 73 KKEEEKEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKK 132
K++ ++ K+ + H + + L T+L +G++ + G N+
Sbjct: 34 KRDLDELKKEVSMDDHK--LSLDELHNKYGTDLTRGLT--NARAKEILARDGPNSLTPPP 89
Query: 133 GRSFLNFLWEAWQDLTLIILIVAAIAS-LALGIKTEGVEEGWYDGASIAFAVFLVIVVTA 191
I+L + AI LA GI+ +E D + + V++VT
Sbjct: 90 TTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTG 149
Query: 192 ISDYRQSLQFQNLNKEKRNIQLEA-----------MRGGKAVKISIFDVVVGEIVPLRIG 240
Y +Q + +++ +R G+ I+ VV G++V ++ G
Sbjct: 150 CFSY-----YQEAKSSR---IMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGG 201
Query: 241 DQVPADGVLVTGHSLAIDESSMTGESKIVRKD----HKTPF-----LMSGCKVADGVGTM 291
D++PAD +++ H +D SS+TGES+ + + P +G
Sbjct: 202 DRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARG 261
Query: 292 MVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFT 351
+V G T G + S TP+ + + I V + + + L+
Sbjct: 262 VVVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL--- 318
Query: 352 GHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTL 411
A + + I+V VPEGL VT+ L
Sbjct: 319 ----GYSWLEAVI---FLIG----------------------IIVANVPEGLLATVTVCL 349
Query: 412 AYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKIN----- 466
+ ++M LV+ L A ET+GS +TICSDKTGTLT N MTV + +
Sbjct: 350 TLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE 409
Query: 467 --PPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAV----EVSGSPTEKAILSWAVK 520
+ + L N VF V+G +E A+L
Sbjct: 410 NQSGAAFDKTSATWSALSRIAALCNRA--VFQAGQDNVPILKRSVAGDASESALLKCIEL 467
Query: 521 LGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHW---KGAAEMILASCTKYL 577
+R + PFNS K + S + KGA E IL C+ L
Sbjct: 468 CCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTIL 527
Query: 578 DTDGQLQSID-GDEDFFKAAVDEMAARSLRCVAIAYR------------FILDKWTLPEE 624
+G + + ++ F+ A E+ R + + F D+ P
Sbjct: 528 -LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTT 586
Query: 625 ELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEAN 684
+L + ++ + DP R V DAV CR AG+KV MVTGD+ TAKAIA GI+ E
Sbjct: 587 DLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETI 646
Query: 685 DPN-------------------IIEGKVFRALSDKEREKVAQEIT--VMGRSSPNDKLLL 723
+ ++ G + LS + + + T V R+SP KL++
Sbjct: 647 EDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLII 706
Query: 724 VQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKV 783
V+ ++ G +VAVTGDG ND+PAL +ADIG+AMGI G++V+K+ +D+I+LDDNFAS+V
Sbjct: 707 VEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTG 766
Query: 784 VRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALA 843
V GR +F N++K I + LT N+ + +V I + +PL V +L ++L D + A++
Sbjct: 767 VEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAIS 826
Query: 844 LATEPPTDHLMHRLPVGRKEP-LITNIMWRNLIVQALYQVTVL------LVLNFKGTSIL 896
LA E +M R P K L+ + Q + ++L G +
Sbjct: 827 LAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPM 886
Query: 897 HLEGERRQHASDVKN-----------------------TMIFNAFVLSQIFNEFNARKPD 933
L G+R + + T F + V+ Q + +
Sbjct: 887 DLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRR 946
Query: 934 EINVFTGVTKNYLFMGIIGITCVLQIIIIE--FLGKFTKTVKLDWKLWLASIGIGLFSWP 991
+F KN + + + L + + L W + L +
Sbjct: 947 NS-IFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLIIFL 1005
Query: 992 LAVLGKMI 999
+ + I
Sbjct: 1006 YDEMRRFI 1013
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 621 bits (1604), Expect = 0.0
Identities = 240/1029 (23%), Positives = 391/1029 (37%), Gaps = 148/1029 (14%)
Query: 73 KKEEEKEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKK 132
K++E+ E ++ + + + V L + +T+ KG+S + G N +
Sbjct: 37 KRKEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLA--AELLLRDGPNALRPPR 94
Query: 133 GRSFLNFLWEAWQDLTLIILIVAAIASLALG-IKTEGVEEGWYDGASIAFAVFLVIVVTA 191
G ++ VAA L I+ + D +A A+ V+VVT
Sbjct: 95 GTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTG 154
Query: 192 ISDYRQSLQFQNLNKEKRNIQLEA-----------MRGGKAVKISIFDVVVGEIVPLRIG 240
Y +Q + + +R G +I+ +VVG++V ++ G
Sbjct: 155 CFGY-----YQEFKSTN---IIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGG 206
Query: 241 DQVPADGVLVTGHSLAIDESSMTGESKIVRKD----HKTPF-----LMSGCKVADGVGTM 291
D+VPAD ++ +D SS+TGES+ + H++P +G
Sbjct: 207 DRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQG 266
Query: 292 MVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFT 351
+V G T G + + S E+TP+ + + I + + V +
Sbjct: 267 LVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI--- 323
Query: 352 GHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTL 411
A V ++ IVV VPEGL VT+ L
Sbjct: 324 ----GYTFLRAMV---FFMA----------------------IVVAYVPEGLLATVTVCL 354
Query: 412 AYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDS 471
+ + +++ + +V+ L A ET+GS + ICSDKTGTLT N MTV + +
Sbjct: 355 SLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTE 414
Query: 472 SQMHSIVIYLLSEGIAQ--------NTTGNVFVPKDGEAV----EVSGSPTEKAILSWAV 519
Q SE N F V G +E A+L ++
Sbjct: 415 DQSGQT-FDQSSETWRALCRVLTLCNRA--AFKSGQDAVPVPKRIVIGDASETALLKFSE 471
Query: 520 KLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHW---KGAAEMILASCTKY 576
R + PFNS K + H KGA E +L C+
Sbjct: 472 LTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSI 531
Query: 577 LDTDGQLQSID-GDEDFFKAAVDEMAARSLRCVAIAYR------------FILDKWTLPE 623
L GQ +D + F+ A + R + F ++ P
Sbjct: 532 L-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPT 590
Query: 624 EELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEA 683
L +V + DP R V DAV CR AG++V MVTGD+ TAKAIA GI+ +E
Sbjct: 591 SGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSET 650
Query: 684 NDPN-------------------IIEGKVFRALSDKEREKVAQEIT--VMGRSSPNDKLL 722
+ +I G + + E + + V R+SP KL+
Sbjct: 651 VEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLV 710
Query: 723 LVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVK 782
+V++ ++ G +VAVTGDG ND+PAL +ADIG+AMGI G++ AK +D+I+LDDNFAS+V
Sbjct: 711 IVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVT 770
Query: 783 VVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGAL 842
V GR +F N++K I + LT N+ L ++ S +PL + +L++ L D ++
Sbjct: 771 GVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSV 830
Query: 843 ALATEPPTDHLMHRLPVGRKEPLITN-------IMWRNLIVQALYQVTVLLVLNFKGTSI 895
+LA E +MH P K + N I + +G
Sbjct: 831 SLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFP 890
Query: 896 LHLEGERRQHASDVKN-----------------------TMIFNAFVLSQIFNEFNARKP 932
L G R Q + T+ F + + QI + +
Sbjct: 891 LLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTR 950
Query: 933 DEINVFTGVTKNYLFMGIIGITCVLQIIIIE--FLGKFTKTVKLDWKLWLASIGIGLFSW 990
G +N + + I + + + + + ++ WL + GL +
Sbjct: 951 RLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIF 1010
Query: 991 PLAVLGKMI 999
+ K+
Sbjct: 1011 VYDEIRKLG 1019
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 613 bits (1582), Expect = 0.0
Identities = 256/1014 (25%), Positives = 417/1014 (41%), Gaps = 153/1014 (15%)
Query: 99 ELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIA 158
+ G++ + +G N P ++G+S + E ++DL + IL++AA
Sbjct: 15 AYFGVSETTGLT--PDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACI 72
Query: 159 SLALGIKTEGVEEG--WYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEA- 215
S L EG E + + F + L+++ AI +Q N E +EA
Sbjct: 73 SFVLAWFEEGEETITAFVE----PFVILLILIANAIVGV-----WQERNAENA---IEAL 120
Query: 216 ----------MRGGKAVKISI--FDVVVGEIVPLRIGDQVPADG--VLVTGHSLAIDESS 261
R + I D+V G+IV + +GD+VPAD + + +L +D+S
Sbjct: 121 KEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSI 180
Query: 262 MTGESKIVRKDHKTPF------------LMSGCKVADGVGTMMVTGVGINTEWGLLMASI 309
+TGES V K + L SG +A G +V G++TE G + +
Sbjct: 181 LTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 240
Query: 310 SEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTS 369
+ ++TPLQ +L+ + V + V + + F A + +
Sbjct: 241 AATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIA 300
Query: 370 VSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLS 429
V+ AV A+PEGLP +T LA R+M A+VR L
Sbjct: 301 VALAV----------------------AAIPEGLPAVITTCLALGTRRMAKKNAIVRSLP 338
Query: 430 ACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMH-SIVIY-----LLS 483
+ ET+G + ICSDKTGTLT N+M+V + FI K ++ + Y +L
Sbjct: 339 SVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLK 398
Query: 484 EGIAQNTTGN-----------------VFVPKDGEAVEVSGSPTEKAILSWAVKLGM--- 523
+ + + E G TE A+ + K+ +
Sbjct: 399 NDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNT 458
Query: 524 -------------KFDRVRSETTVLHVFPFNSEKKRGGVAVK-----RINSEVHVHWKGA 565
+R F+ ++K V R + KGA
Sbjct: 459 EVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGA 518
Query: 566 AEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDE--MAARSLRCVAIAYRFILDKWTLP 622
E ++ C + G + + + E +LRC+A+A R K
Sbjct: 519 PEGVIDRCNYVR-VGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEM 577
Query: 623 -----------EEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIA 671
E +L + +VG+ DP R V +++LCRDAG++V M+TGDN TA AI
Sbjct: 578 VLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC 637
Query: 672 LECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGG 731
GI G + E D G+ F L E+ + + R P+ K +V+ L+
Sbjct: 638 RRIGIFGENEEVADR-AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYD 696
Query: 732 DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVF 791
++ A+TGDG NDAPAL +A+IG+AMG GT VAK S++++ DDNF+++V V GR+++
Sbjct: 697 EITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIY 755
Query: 792 ANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTD 851
N+++FI++ ++ NV ++ + A L VQLLWVNL+ D L A AL PP
Sbjct: 756 NNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDL 815
Query: 852 HLMHRLPVGRKEPLITNIMWRNLIVQALYQ--VTVL-----LVLNFKGTSILHLEGERRQ 904
+M R P KEPLI+ ++ + Y TV + G + + +
Sbjct: 816 DIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFM 875
Query: 905 HASDVKN----------------TMIFNAFVLSQIFNEFNARKPDEINVFT-GVTKNYLF 947
++ TM + V ++ N N+ ++ ++ N
Sbjct: 876 QCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQ-SLMRMPPWVNIWL 934
Query: 948 MGIIGITCVLQIIII--EFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMI 999
+G I ++ L +I+ + L K LD WL + I L L + K I
Sbjct: 935 LGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 988
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 529 bits (1364), Expect = e-173
Identities = 167/925 (18%), Positives = 345/925 (37%), Gaps = 92/925 (9%)
Query: 78 KEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFL 137
++ + + I ++ + + LK + E G++ + + +R FG N KK L
Sbjct: 5 EDIKNETVDLEK--IPIEEVFQQLKCSRE-GLTTQEGE--DRIQIFGPNKLEEKKESKLL 59
Query: 138 NFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQ 197
FL W + ++ +AAI ++AL + W D I + + ++ I +
Sbjct: 60 KFLGFMW-NPLSWVMEMAAIMAIALANGDGRPPD-WQDFVGIICLLVINSTISFIEENNA 117
Query: 198 SLQFQNLNKEKRNIQLEA--MRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSL 255
+ + +R GK + +V G+IV +++GD +PAD L+ G L
Sbjct: 118 G---NAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPL 174
Query: 256 AIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGE 315
+D+S++TGES V K H + SG G +V G++T +G + N +
Sbjct: 175 KVDQSALTGESLPVTK-HPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-Q 232
Query: 316 ETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVD 375
Q L + F + + V+ + + +
Sbjct: 233 VGHFQKVLTAIGNF-----CICSIAIGMVIEI-IVMYPIQRRKYRDGI---DNLLV---- 279
Query: 376 GVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMG 435
+++ +P +P +++T+A ++ A+ +R++A E M
Sbjct: 280 ------------------LLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 321
Query: 436 SATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVF 495
+CSDKTGTLTLN+++V + + ++ + + S
Sbjct: 322 GMDVLCSDKTGTLTLNKLSVDKNLV---EVFCKGVEKDQVLLFAAMASR----------- 367
Query: 496 VPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRIN 555
+ + A++ R+ +H PFN KR + +
Sbjct: 368 --------VENQDAIDAAMVGMLADPK----EARAGIREVHFLPFNPVDKRTALTYIDGS 415
Query: 556 SEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFI 615
H KGA E IL ++ + + + +D+ A R LR +A+A + +
Sbjct: 416 GNWHRVSKGAPEQILELAKA---SNDLSKKV-------LSIIDKYAERGLRSLAVARQVV 465
Query: 616 LDKWTL-PEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALEC 674
+K P + ++ + DP R + ++ + GV V+M+TGD L K
Sbjct: 466 PEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 525
Query: 675 GILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVV 734
G+ + ++ ++ L+ E++ ++ P K +V+ L++ +V
Sbjct: 526 GMGTNMYPSS--ALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIV 583
Query: 735 AVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANI 794
+TGDG NDAPAL +ADIG+A+ T+ A+ SDI++ + + ++ V R++F +
Sbjct: 584 GMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRM 642
Query: 795 QKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLM 854
+ + + +++ + + + + +A +L + ++ D + ++ +
Sbjct: 643 KNYTIYAVSITIRIVFG-FMLIALIWEFDFSAFMVLIIAILND-GTIMTISKDRVKP--- 697
Query: 855 HRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMI 914
P K I QA+ V + + + +
Sbjct: 698 SPTPDSWKLKEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAV 757
Query: 915 FNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKL 974
+ + F R F L + + + +I + +F K +
Sbjct: 758 YLQVSIISQALIFVTRSRS--WSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGI 815
Query: 975 DWKLWLASIGIGLFSWPLAVLGKMI 999
W + ++ + K
Sbjct: 816 GWGWAGVIWLYSIVTYFPLDVFKFA 840
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 517 bits (1333), Expect = e-168
Identities = 195/987 (19%), Positives = 378/987 (38%), Gaps = 114/987 (11%)
Query: 17 VGPSNDGSDVVLEDDVSSDPFDIAQAKHVPVASLKRWRQASLV-LNASRRFRYTLDLKKE 75
+ + L ++ S FD A+ + ++A + D
Sbjct: 1 MADHSASGAPALSTNIESGKFDEKAAEAAAYQPKPKVEDDEDEDIDALIEDLESHDGHDA 60
Query: 76 EEKEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRS 135
EE+E+ ++L+T+ G++ ++ RR +G N +K
Sbjct: 61 EEEEEEATPGGGRVVP------EDMLQTDTRVGLTSEEVV--QRRRKYGLNQMKEEKENH 112
Query: 136 FLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDY 195
FL FL ++ AA+ + L W D I + L VV + ++
Sbjct: 113 FLKFLGFFV-GPIQFVMEGAAVLAAGLE--------DWVDFGVICGLLLLNAVVGFVQEF 163
Query: 196 RQSLQFQNLNKEKRNIQLEA--MRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGH 253
+ L K+ + L+A +R G +I +VV G+I+ + G +PADG +VT
Sbjct: 164 QAGSIVDEL---KKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD 220
Query: 254 S-LAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISED 312
+ L +D+S++TGES V K HK + + V G +++T G NT G A ++
Sbjct: 221 AFLQVDQSALTGESLAVDK-HKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAA 279
Query: 313 NGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSD 372
+G LNG+ T + I+ V F +L V + F+ +
Sbjct: 280 SGGSGHFTEVLNGIGTILLIL---VIFTLLIVWVSSFYRSN------------------P 318
Query: 373 AVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACE 432
V + + I ++ VP GLP VT T+A + KA+V++LSA E
Sbjct: 319 IVQILEFTLAIT-----------IIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIE 367
Query: 433 TMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTG 492
++ +CSDKTGTLT N++++ + + + + L + +
Sbjct: 368 SLAGVEILCSDKTGTLTKNKLSLHDPY------TVAGVDPEDLMLTACLAAS--RKKKGI 419
Query: 493 NVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVK 552
+ +KA L ++K + V S+ VL PF+ K+ V+
Sbjct: 420 D---------------AIDKAFLK-SLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVE 463
Query: 553 RINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAY 612
E KGA +L + + + + +K V E A R R + +A
Sbjct: 464 SPQGERITCVKGAPLFVLKTVEEDHPIP------EEVDQAYKNKVAEFATRGFRSLGVAR 517
Query: 613 RFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIAL 672
+ E +L I+ DP R V + G+ ++M+TGD + A+ +
Sbjct: 518 KRG-------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSR 570
Query: 673 ECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGD 732
+ G+ + + + E + P K +V+ L++ G
Sbjct: 571 QLGLGT---NIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGY 627
Query: 733 VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFA 792
+VA+TGDG NDAP+L +AD G+A+ ++ A+ +DI+ L +++ ++ R +F
Sbjct: 628 LVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFH 686
Query: 793 NIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDH 852
+ ++ +++ +++ L I + I+ + LN ++++ + D + LA+A +
Sbjct: 687 RMYAYVVYRIALSI-HLEIFLGLWIAILNRSLNIELVVFIAIFAD-VATLAIAYDNAP-- 742
Query: 853 LMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNT 912
+ PV P + + ++ + + + G + +
Sbjct: 743 -YSQTPVKWNLPKLWGMS----VLLGVVLAVGTWITVTTMYAQGENGGIVQNFG--NMDE 795
Query: 913 MIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTV 972
++F L++ + F R F ++ G I + +L + + +
Sbjct: 796 VLFLQISLTENWLIFITRANGP---FWSSIPSWQLSGAIFLVDILATCFTIW--GWFEHS 850
Query: 973 KLDWKLWLASIGIGLFSWPLAVLGKMI 999
+ + + I
Sbjct: 851 DTSIVAVVRIWIFSFGIFCIMGGVYYI 877
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 6e-31
Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 33/167 (19%)
Query: 628 LLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPN 687
+A I D RP +KD ++ ++ G+K+ +++GD K ++ E I
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI----------- 175
Query: 688 IIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747
++ + P DK+ +++ L++ G+ V + GDG NDA AL
Sbjct: 176 ---------------QEYYSN--LS----PEDKVRIIEKLKQNGNKVLMIGDGVNDAAAL 214
Query: 748 HEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANI 794
AD+ +AMG G +++K +DII++ ++ +++ +++ + + I
Sbjct: 215 ALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAI 260
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 1e-29
Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 51/225 (22%)
Query: 628 LLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPN 687
+A++ ++DP + + + + +G+++ M+TGD+ +TA+A+A GI AE
Sbjct: 545 TVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAE----- 599
Query: 688 IIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747
+M P DK +V L+ G +VA+ GDG NDAPAL
Sbjct: 600 -----------------------IM----PEDKSRIVSELKDKGLIVAMAGDGVNDAPAL 632
Query: 748 HEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQK-----FIQFQL 802
+ADIG+AMG GT+VA E++ + +L + + K R S +NI++ FI L
Sbjct: 633 AKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVL 691
Query: 803 TVNVAA--------LLIN-VVA----AISSGDVPLNAVQLLWVNL 834
V +AA LL++ ++A A+SS V +NA++L V L
Sbjct: 692 GVPLAAGVLYPLTGLLLSPMIAAAAMALSSVSVIINALRLKRVTL 736
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 5e-09
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 216 MRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKT 275
G ++S+ +V VG+++ +R G+++P DG + G S +DES +TGE V K+
Sbjct: 231 KEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGEPIPVAKE--- 286
Query: 276 PFLMSGCKVA------DGVGTMMVTGVGINT 300
+ KV G M VG +T
Sbjct: 287 ----ASAKVIGATINQTGSFVMKALHVGSDT 313
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 1e-29
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 34/167 (20%)
Query: 628 LLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPN 687
+ ++ + D RP ++A+ + G+K M+TGDN AK +A E G+
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL----------- 183
Query: 688 IIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747
+ E V+ P++K V+ +++ V A+ GDG NDAPAL
Sbjct: 184 ---------------DDYFAE--VL----PHEKAEKVKEVQQKY-VTAMVGDGVNDAPAL 221
Query: 748 HEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANI 794
+AD+G+A+G GT+VA E +DI+++ ++ V +V R ++
Sbjct: 222 AQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKF 267
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 117 bits (297), Expect = 2e-29
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 34/167 (20%)
Query: 628 LLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPN 687
+ I+ + D + K AV+ + G+KV M+TGDN ++A+AI+ E +
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 202
Query: 688 IIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747
+ V E V+ P+ K V+ L+ VVA GDG NDAPAL
Sbjct: 203 ---------------DLVIAE--VL----PHQKSEEVKKLQAKE-VVAFVGDGINDAPAL 240
Query: 748 HEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANI 794
+AD+G+A+G G++VA E+ DI+++ D+ VV ++ R + I
Sbjct: 241 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 286
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 3e-28
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 34/167 (20%)
Query: 628 LLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPN 687
+ I+ + D + K AV+ + G+KV M+TGDN ++A+AI+ E +
Sbjct: 448 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 496
Query: 688 IIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747
+ V E V+ P+ K V+ L+ VVA GDG NDAPAL
Sbjct: 497 ---------------DLVIAE--VL----PHQKSEEVKKLQAKE-VVAFVGDGINDAPAL 534
Query: 748 HEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANI 794
+AD+G+A+G G++VA E+ DI+++ D+ VV ++ R + I
Sbjct: 535 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 580
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 9e-09
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 216 MRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKT 275
+R GK + + + +V VG+IV +R G+++P DGV+V G S +DES ++GE V K
Sbjct: 138 IRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKS--- 193
Query: 276 PFLMSGCKVA------DGVGTMMVTGVGINT 300
G +V GV + T VG T
Sbjct: 194 ----KGDEVFGATINNTGVLKIRATRVGGET 220
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 2e-27
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 34/167 (20%)
Query: 628 LLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPN 687
+ I+ + D + K AV+ + G+KV M+TGDN ++A+AI+ E +
Sbjct: 526 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 574
Query: 688 IIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747
+A+ V+ P+ K V+ L+ VVA GDG NDAPAL
Sbjct: 575 --------------DLVIAE---VL----PHQKSEEVKKLQAKE-VVAFVGDGINDAPAL 612
Query: 748 HEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANI 794
+AD+G+A+G G++VA E+ DI+++ D+ VV ++ R + I
Sbjct: 613 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 658
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 59.8 bits (146), Expect = 3e-09
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 216 MRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKT 275
+R GK + + + +V VG+IV +R G+++P DGV+V G S +DES ++GE V K
Sbjct: 216 IRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKS--- 271
Query: 276 PFLMSGCKV------ADGVGTMMVTGVGINT 300
G +V GV + T VG T
Sbjct: 272 ----KGDEVFGATINNTGVLKIRATRVGGET 298
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 2e-19
Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 507 GSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAA 566
+ + A+L + + S + PF+ E++R V V + KGA
Sbjct: 33 KNLLDTAVLEGTDEESA--RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90
Query: 567 EMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKWTLP--- 622
+ IL C++ +G++ +D K D + + LR VA+A +++ +
Sbjct: 91 QEILNVCSQVR-HNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRA 149
Query: 623 -EEELILLAIVGIKDP 637
E +LIL + D
Sbjct: 150 DESDLILEGYIAFLDH 165
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.0 bits (160), Expect = 5e-11
Identities = 78/578 (13%), Positives = 145/578 (25%), Gaps = 216/578 (37%)
Query: 446 GTLTLNEMTVVEAFIG--------------RKKINPPDDSSQMHSIVIYLLSEGIAQNTT 491
TL + +V+ F+ + + P ++M Y+ N
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM-----YIEQRDRLYND- 122
Query: 492 GNVFVPKDGEAVEVSGSPTEKAILSWAVKL---------GMK--------FDRVRSETTV 534
VF + VS + ++L G+ D S V
Sbjct: 123 NQVFAKYN-----VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYK-V 176
Query: 535 LHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQS----IDGDE 590
F + W + L +C LQ ID +
Sbjct: 177 QCKMDFK------------------IFW-----LNLKNCNSPETVLEMLQKLLYQIDPN- 212
Query: 591 DFFKAAVDEMAARSLRCVAIAYRF--ILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKL 648
+ + D + LR +I +L L+L V+
Sbjct: 213 --WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL---------------LNVQ- 254
Query: 649 CRDAGVKVRMVTGDNLQTAKAIALECGIL--GSDAEANDPNIIEGKVFRALSDKEREKVA 706
N + A L C IL + V LS ++
Sbjct: 255 --------------NAKAWNAFNLSCKILLTTRFKQ----------VTDFLSAATTTHIS 290
Query: 707 QEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG--LAMGIQGTEVA 764
+ M + K LL++ L D P E + I
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYL----------DCRPQDLP--REVLTTNPRRLSIIAES-- 336
Query: 765 KENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQ-FQLTVNV----------AALLI-- 811
+ D A W N K + ++NV L +
Sbjct: 337 --------IRDGLA------TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382
Query: 812 -NVVAAISSGDVPLNAVQLLWVNL-------IMDTLGALALATEPPTDHLMHRLPVGRKE 863
+ +P + L+W ++ +++ L +L + P KE
Sbjct: 383 PSA-------HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP------------KE 423
Query: 864 PLITNIMWRNLIVQALYQVTVLLVLNFKGTSILH---LEGERRQHASDVKNTMIFNAFVL 920
I+ + + + L + + LH ++ D + +
Sbjct: 424 STIS-----------IPSIYLELKVKLENEYALHRSIVDHYNIPKTFD------SDDLIP 466
Query: 921 SQIFNEF---------NARKPDEINVFTGVTKNYLFMG 949
+ F N P+ + +F V ++ F+
Sbjct: 467 PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE 504
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 1e-06
Identities = 103/757 (13%), Positives = 209/757 (27%), Gaps = 244/757 (32%)
Query: 14 DVEVGPSNDG-SDV--VLEDDVSSDPFDIAQAKHVPVASLKRWRQASLVLNASRRFRYTL 70
D E G D+ V ED + FD K V + +
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDN-FDC---KDVQ--------------DMPKSI---- 45
Query: 71 DLKKEEEKEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISG--DDTDLSNRRNSFGSNTY 128
L KEE +I + V L L + E+ + ++ N Y
Sbjct: 46 -LSKEEIDH----IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN---------Y 91
Query: 129 PLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIV 188
FL + S+ + E + + D FA + V
Sbjct: 92 K---------FLMSPIKTEQR-------QPSMMTRMYIEQRDRLYNDNQV--FAKYNVSR 133
Query: 189 VTAISDYRQSLQFQNLNKEKRNIQLEAMRG-GKAVKISIFDVVVGEIVPLRIGDQVPADG 247
+ RQ+L L K N+ ++ + G GK
Sbjct: 134 LQPYLKLRQAL--LELRPAK-NVLIDGVLGSGKTW------------------------- 165
Query: 248 VLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSG---------CKVADGVGTMMVTGVGI 298
+A+D V +K M C + V M+
Sbjct: 166 -------VALD----------VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML------ 202
Query: 299 NTEWGLLMASISEDNGEETPLQVRLNGVAT----FIGIVGLAVAFLVLA----VLLVRFF 350
+ + + + + +++R++ + + LVL F
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF 262
Query: 351 TGH-----TTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAV---PE- 401
TT+ + F+ T+ ++D +T +++ + + P
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT-PDEVKSLLLKYLDCRPQDLPRE 321
Query: 402 ---GLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEM-TVVE 457
P +++ +A S+R +A D + +++ T++E
Sbjct: 322 VLTTNPRRLSI-IAESIRDGLA------TW--------------DNWKHVNCDKLTTIIE 360
Query: 458 AFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILS- 516
+ + + P + + + F P + PT +LS
Sbjct: 361 SSL--NVLEPAEYRKMFDRLSV---------------F-PPS---AHI---PTI--LLSL 394
Query: 517 -WAVKLGMKFDRVRSETTVLHVFPF-NSEKKRGGVAVKRINSEVHVHWKGAAEM---ILA 571
W + V LH + + K +++ I E+ V + + I+
Sbjct: 395 IWF---DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD 451
Query: 572 S--CTKYLDTDGQLQSIDGDEDFF--------KAAVDEMAARSLRCVAIAYRFILDKWTL 621
K D+D + D+ F+ E R V + +RF+ K
Sbjct: 452 HYNIPKTFDSDDLIPPYL-DQYFYSHIGHHLKNIEHPERMT-LFRMVFLDFRFLEQK--- 506
Query: 622 PEEELILLAIVGIKDPCRPGVKDAVK--------LCRDAGVKVRMVT--GDNLQTAKAIA 671
+ + + ++ +C + R+V D L +
Sbjct: 507 -------IRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENL 559
Query: 672 LECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQE 708
+ +++ AL ++ E + +E
Sbjct: 560 ICS---------KYTDLLR----IALMAED-EAIFEE 582
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 7e-05
Identities = 41/241 (17%), Positives = 66/241 (27%), Gaps = 72/241 (29%)
Query: 12 PRDVEVGPSNDGSDVVLE----DDVSSDPFDIAQAKHVPVASLKRWRQASLVLNASRRFR 67
P + P+ +L D + SD + H + SLV +
Sbjct: 382 PPSAHI-PTI-----LLSLIWFDVIKSDVMVVVNKLH----------KYSLVEKQPKEST 425
Query: 68 YTLDLKKEEEKEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSF---- 123
++ E K K H ++ N+ K DD F
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVD--------HYNIPKTFDSDDLIPPYLDQYFYSHI 477
Query: 124 GSNTYPLKKGRS----------FLNFLW---------EAWQDLTLIILIVAAIASLALGI 164
G + LK FL+F + AW +I + +
Sbjct: 478 G---HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA-------SGSILNTLQQL 527
Query: 165 K------TEGVEEGWYDGASIAFAVFLVIVVTAI--SDYRQSLQFQNLNKEKRNIQLEAM 216
K + + Y+ A FL + + S Y L+ L E I EA
Sbjct: 528 KFYKPYICD--NDPKYERLVNAILDFLPKIEENLICSKYTDLLRIA-LMAEDEAIFEEAH 584
Query: 217 R 217
+
Sbjct: 585 K 585
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 58.2 bits (142), Expect = 2e-10
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 216 MRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRK 271
+R GK + + + +V VG+IV +R G+++P DGV+V G S +DES ++GE V K
Sbjct: 17 IRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLK 71
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 51.3 bits (124), Expect = 6e-08
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 222 VKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRK 271
++ + V G+I+ + G + P DG ++ GHS +DES +TGE+ V K
Sbjct: 35 EQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMPVAK 83
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 2e-07
Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 11/160 (6%)
Query: 627 ILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDP 686
+ + V R G ++ V + + +++G + LE + N
Sbjct: 67 EITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPL-LEGIVEKDRIYCNHA 125
Query: 687 NIIEGKVFRALSDKEREKVAQEITVMGRSSPN-DKLLLVQALRKGGDVVAVTGDGTNDAP 745
+ + + K ++ L + + + GD D
Sbjct: 126 SFDNDYI--------HIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVE 177
Query: 746 ALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785
A +D+ A E ++N + + D F + K +
Sbjct: 178 AAKLSDLCFARDYLLNECREQNLNHLPYQD-FYEIRKEIE 216
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 5e-07
Identities = 24/145 (16%), Positives = 54/145 (37%), Gaps = 28/145 (19%)
Query: 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEAN------DPNIIEGKV 693
PG+++ V ++ V+V +++G + +A + I ++ AN +
Sbjct: 89 PGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE 148
Query: 694 FRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKG---GDVVAVTGDGTNDAPALHEA 750
+ ++ K +++ L++ ++ + GDG D A A
Sbjct: 149 TQPTAESGG-----------------KGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPA 190
Query: 751 DIGLAM-GIQGTEVAKENSDIIILD 774
D + G + K+N+ I D
Sbjct: 191 DAFIGFGGNVIRQQVKDNAKWYITD 215
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 27/146 (18%), Positives = 49/146 (33%), Gaps = 23/146 (15%)
Query: 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSD 699
G + V ++ KV +G + A +N + L+
Sbjct: 78 EGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHL--DAAFSNTLIVENDA----LNG 131
Query: 700 KEREKVAQEITVMGRSSPNDKLLLVQALRK-----GGDVVAVTGDGTNDAPALHEADIGL 754
V + M S K ++ L++ + + V GDG ND A I +
Sbjct: 132 L----VTGHM--MFSHS---KGEMLLVLQRLLNISKTNTLVV-GDGANDLSMFKHAHIKI 181
Query: 755 AMGIQGTEVAKENSDIIILDDNFASV 780
A EV K+++ I + + A +
Sbjct: 182 AFN--AKEVLKQHATHCINEPDLALI 205
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 3e-05
Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 23/138 (16%)
Query: 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSD 699
PG+ + + + G K +++G + + + A +N I + L+D
Sbjct: 182 PGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQL--DYAFSNTVEIRDNV----LTD 235
Query: 700 KEREKVAQEITVMGRSSPNDKLLLVQALRKG-----GDVVAVTGDGTNDAPALHEADIGL 754
+ I M ++ K + L +++A GDG ND P L A G+
Sbjct: 236 N----ITLPI--MNAAN---KKQTLVDLAARLNIATENIIAC-GDGANDLPMLEHAGTGI 285
Query: 755 AMGIQGTEVAKENSDIII 772
A V +E I
Sbjct: 286 AWK--AKPVVREKIHHQI 301
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 23/138 (16%)
Query: 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSD 699
P + + V G KV + +G + + + + A++N I+ GK L+
Sbjct: 181 PELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSL--DYAQSNTLEIVSGK----LTG 234
Query: 700 KEREKVAQEITVMGRSSPNDKLLLVQALRK-----GGDVVAVTGDGTNDAPALHEADIGL 754
+ V E+ + + K ++ L + + VAV GDG ND + A +G+
Sbjct: 235 Q----VLGEV--VSAQT---KADILLTLAQQYDVEIHNTVAV-GDGANDLVMMAAAGLGV 284
Query: 755 AMGIQGTEVAKENSDIII 772
A + + +
Sbjct: 285 AYH--AKPKVEAKAQTAV 300
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 2e-04
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 23/138 (16%)
Query: 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSD 699
G ++ +K ++ G V +V+G I + G+ A AN + +GK L+
Sbjct: 79 EGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGL--DYAFANRLIVKDGK----LTG 132
Query: 700 KEREKVAQEITVMGRSSPNDKLLLVQALRK-----GGDVVAVTGDGTNDAPALHEADIGL 754
V E+ + ++ K +++ + K D VAV GDG ND +A + +
Sbjct: 133 D----VEGEV--LKENA---KGEILEKIAKIEGINLEDTVAV-GDGANDISMFKKAGLKI 182
Query: 755 AMGIQGTEVAKENSDIII 772
A + KE +DI I
Sbjct: 183 AFC--AKPILKEKADICI 198
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 3e-04
Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 27/89 (30%)
Query: 39 IAQAKHV---PVASLKRWRQASLVLNASRRFRYTLDLKKEEEKEKRRRMIRAHAQVIRVK 95
IAQA + P S+++WR+ R L + + + + R A+ K
Sbjct: 74 IAQADRLTQEP-ESIRKWRE---------EQRKRLQ-ELDAASKVMEQEWREKAK----K 118
Query: 96 GLSELLK---TNLEKGISGDDTDLSNRRN 121
L E + +EK +NR
Sbjct: 119 DLEEWNQRQSEQVEKNKI------NNRIA 141
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 20/117 (17%)
Query: 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSD 699
G + V R +V +++ + ++ + + G + I +
Sbjct: 72 EGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGF--PTLLCHKLEIDDSD------- 121
Query: 700 KEREKVAQEITVMGRSSPNDKLLLVQALRK-GGDVVAVTGDGTNDAPALHEADIGLA 755
+ + K V A + V+A GD ND L EA G+
Sbjct: 122 --------RVVGYQLRQKDPKRQSVIAFKSLYYRVIAA-GDSYNDTTMLSEAHAGIL 169
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1023 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.94 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.94 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.92 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.92 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.91 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.81 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.76 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.4 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.26 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.19 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.13 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.12 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.11 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.01 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.01 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.99 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.94 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.9 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.9 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.86 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.84 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.81 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.79 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.78 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.77 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.75 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.73 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.73 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.71 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.7 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.64 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.63 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.61 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.61 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.57 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.55 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.54 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.51 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.51 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.49 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.46 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.45 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.45 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.42 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.42 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.4 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.4 | |
| 4aqr_D | 57 | Calcium-transporting ATPase 8, plasma membrane-TY; | 98.4 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.36 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.35 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.3 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.28 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.23 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.22 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.2 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.19 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.18 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.18 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.16 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.15 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.1 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.1 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.08 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.07 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.07 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.05 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.05 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.04 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.03 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.03 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.0 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.98 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.97 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.92 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.92 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.9 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.9 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.88 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.88 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.88 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.87 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.86 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.85 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.83 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.76 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.76 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.74 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.69 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.68 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.68 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.67 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.67 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.64 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.63 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.62 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.62 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.6 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.59 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.59 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.58 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.55 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.44 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.43 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.42 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.34 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.33 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.33 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.31 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.3 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.25 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.16 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.07 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.93 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.92 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.91 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.84 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.79 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.74 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.66 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.41 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.41 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.23 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.19 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.07 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.05 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 95.96 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.95 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.75 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 95.71 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.49 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 95.48 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.12 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.03 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 94.9 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.64 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 94.54 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.45 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.38 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 93.16 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 92.74 | |
| 2l1w_B | 26 | Vacuolar calcium ATPase BCA1 peptide; calmodulin, | 90.81 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 90.63 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 90.13 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 87.67 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 85.93 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 85.69 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 84.23 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 83.98 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-134 Score=1293.40 Aligned_cols=885 Identities=25% Similarity=0.347 Sum_probs=753.3
Q ss_pred HHHhhhhhhhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042091 81 RRRMIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASL 160 (1023)
Q Consensus 81 ~~~~~~~~~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~ 160 (1023)
.++......|...++++.+.|++++.+|||++ |+.+|+++||+|+++.++.+++|+.+++||.+++++++++++++++
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~--ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~ 122 (1034)
T 3ixz_A 45 MKKEMEINDHQLSVAELEQKYQTSATKGLSAS--LAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICL 122 (1034)
T ss_pred HhhhcCcchhhCCHHHHHHHhCCCcccCCCHH--HHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 33334445677789999999999998999998 8999999999999998888999999999999999999999999887
Q ss_pred Hhcccc---CC--CccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEE
Q 042091 161 ALGIKT---EG--VEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIV 235 (1023)
Q Consensus 161 ~~~~~~---~~--~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV 235 (1023)
+.+... .. ....|++++.+++++++..+++.++++|+++.+++|+++.+ .+++|+|||++++|+++||||||||
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~-~~a~ViRdG~~~~I~~~eLv~GDiV 201 (1034)
T 3ixz_A 123 IAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVP-QQATVIRDGDKFQINADQLVVGDLV 201 (1034)
T ss_pred HHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCC-CeeEEEECCEEEEEEHHHCCCCcEE
Confidence 764221 11 12357888888878888889999999999999999998875 6899999999999999999999999
Q ss_pred EecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCC---------CCeeeccceEeecceeEEEEEEecccHHHHHH
Q 042091 236 PLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHK---------TPFLMSGCKVADGVGTMMVTGVGINTEWGLLM 306 (1023)
Q Consensus 236 ~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~---------~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~ 306 (1023)
.|++||+|||||+|++|+++.||||+|||||.|+.|.++ .+++|+||.|.+|.++++|++||.+|++|+|+
T Consensus 202 ~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~ 281 (1034)
T 3ixz_A 202 EMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIA 281 (1034)
T ss_pred EEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHH
Confidence 999999999999999999899999999999999999764 35789999999999999999999999999999
Q ss_pred hhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhc
Q 042091 307 ASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATN 386 (1023)
Q Consensus 307 ~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 386 (1023)
+++.+.+.++||+|+++++++.++..++++++++++++++. .+. .+...+..+
T Consensus 282 ~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~----------------------~~~~~~~~~-- 334 (1034)
T 3ixz_A 282 SLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMC---IGY----------------------TFLRAMVFF-- 334 (1034)
T ss_pred HhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc----------------------hHHHHHHHH--
Confidence 99999899999999999999999988888777776665432 111 146667777
Q ss_pred chhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccC
Q 042091 387 SRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKIN 466 (1023)
Q Consensus 387 ~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~ 466 (1023)
+++++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.++++++..+.
T Consensus 335 -----i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~ 409 (1034)
T 3ixz_A 335 -----MAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHS 409 (1034)
T ss_pred -----HHHHHheeccccHHHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999998766443
Q ss_pred CCCCC-------CcccHHHHHHHHHHHHccCCCcccccCCC---CceeecCChHHHHHHHHHHHcCCChhcccccccEEE
Q 042091 467 PPDDS-------SQMHSIVIYLLSEGIAQNTTGNVFVPKDG---EAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLH 536 (1023)
Q Consensus 467 ~~~~~-------~~~~~~~~~ll~~~i~~~~~~~~~~~~~~---~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~ 536 (1023)
..... ....+.... +...++.|+.+......+. ......|+|+|.|+++++.+.+.+....++.+++++
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~-l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~ 488 (1034)
T 3ixz_A 410 ADTTEDQSGQTFDQSSETWRA-LCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVC 488 (1034)
T ss_pred ccCcccccccccCcCCHHHHH-HHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceE
Confidence 22110 011122223 3344444544433211111 134678999999999999988888777888899999
Q ss_pred EecCCCCCceEEEEEeecC---CeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhh
Q 042091 537 VFPFNSEKKRGGVAVKRIN---SEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAY 612 (1023)
Q Consensus 537 ~~~F~s~~k~msviv~~~~---~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ay 612 (1023)
++||+|+||+|+++++..+ +++.+++|||||.|+++|+.+. .+|...+++++. +.+.+.+++|+.+|+||+++||
T Consensus 489 ~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~ 567 (1034)
T 3ixz_A 489 EIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQ 567 (1034)
T ss_pred EeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhh-cCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeE
Confidence 9999999999998877543 6789999999999999999876 466677888776 8899999999999999999999
Q ss_pred cccccc------------CCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCC
Q 042091 613 RFILDK------------WTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSD 680 (1023)
Q Consensus 613 k~~~~~------------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~ 680 (1023)
|.+.++ .+..|+|++|+|+++++||+|++++++|++|+++||+|+|+|||++.||.++|+++||..+.
T Consensus 568 ~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~ 647 (1034)
T 3ixz_A 568 LYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEG 647 (1034)
T ss_pred EecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCC
Confidence 987532 12357899999999999999999999999999999999999999999999999999997543
Q ss_pred CC-------------------CCCCeeeechhhhccCHHHHHHHHhhc--eEeccCCHhhHHHHHHHHHhCCCEEEEEcC
Q 042091 681 AE-------------------ANDPNIIEGKVFRALSDKEREKVAQEI--TVMGRSSPNDKLLLVQALRKGGDVVAVTGD 739 (1023)
Q Consensus 681 ~~-------------------~~~~~vi~g~~~~~l~~~~~~~~~~~~--~v~ar~~P~~K~~iV~~lq~~g~~V~~iGD 739 (1023)
.. .....+++|.++..++++++.+.+.+. .+|+|++|+||.++|+.+|+.|++|+|+||
T Consensus 648 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GD 727 (1034)
T 3ixz_A 648 SETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGD 727 (1034)
T ss_pred chHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECC
Confidence 21 123468999999999999999988876 499999999999999999999999999999
Q ss_pred CccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 042091 740 GTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISS 819 (1023)
Q Consensus 740 G~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~ 819 (1023)
|.||+|||++||+|||||++|++++|++||+++.+++|++++.++++||++|+||+|++.|++++|+..+++.+++.+++
T Consensus 728 G~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~ 807 (1034)
T 3ixz_A 728 GVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS 807 (1034)
T ss_pred cHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCC-CCCCcchHHHHHHHH-HHHHHHHHHHHHHHhhhcc--
Q 042091 820 GDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGR-KEPLITNIMWRNLIV-QALYQVTVLLVLNFKGTSI-- 895 (1023)
Q Consensus 820 ~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~-- 895 (1023)
.+.||+++|+||+|+++|.+|+++|++|||++++|+|||+++ +++++++.+++..++ .+++++++.++.+|.....
T Consensus 808 ~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 887 (1034)
T 3ixz_A 808 VPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEG 887 (1034)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999987 689999887665444 4777665555444432111
Q ss_pred ------ccccc-------ccc-------------ccccccchhHHHHHHHHHHHHhhcccCCCCccceee-cCcchHHHH
Q 042091 896 ------LHLEG-------ERR-------------QHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFT-GVTKNYLFM 948 (1023)
Q Consensus 896 ------~~~~~-------~~~-------------~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~ 948 (1023)
+++.. .+. ......++|++|++++++|+||.+++|+.+. ++|+ ++++|++++
T Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~-s~~~~~~~~N~~l~ 966 (1034)
T 3ixz_A 888 WFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRL-SAFQQGFFRNRILV 966 (1034)
T ss_pred CccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCC-cccccCCcccHHHH
Confidence 00000 000 0011237899999999999999999999764 5554 789999999
Q ss_pred HHHHHHHHHHHHH--HHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 042091 949 GIIGITCVLQIII--IEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPK 1003 (1023)
Q Consensus 949 ~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 1003 (1023)
+++++++++|+++ +|+++.+|++.|+++.+|+++++++++.++++|++|++.|++
T Consensus 967 ~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~ 1023 (1034)
T 3ixz_A 967 IAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCC 1023 (1034)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9998888888664 688999999999999999999999999999999999987754
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-132 Score=1274.37 Aligned_cols=876 Identities=26% Similarity=0.337 Sum_probs=743.4
Q ss_pred hhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--
Q 042091 89 AQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKT-- 166 (1023)
Q Consensus 89 ~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~-- 166 (1023)
.|...++++.+.|+++..+||+++ |+.+|+++||+|+++.++.+++|+.++++|.++++++|+++++++++.+...
T Consensus 48 ~~~~~~~~~~~~l~t~~~~GLs~~--e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~ 125 (1028)
T 2zxe_A 48 DHKLSLDELHNKYGTDLTRGLTNA--RAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAA 125 (1028)
T ss_dssp CSSSCHHHHHHHHTCCSSSCBCHH--HHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHhCcCccCCCCHH--HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcc
Confidence 456679999999999988999987 8999999999999998888999999999999999999999999998775321
Q ss_pred ---CCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCcc
Q 042091 167 ---EGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQV 243 (1023)
Q Consensus 167 ---~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~V 243 (1023)
......|++++.+++++++..+++.++++++++..++|.++.+ ..++|+|||++++|+++||||||||.|++||+|
T Consensus 126 ~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~-~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~I 204 (1028)
T 2zxe_A 126 TEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVP-QQALVIRDGEKSTINAEFVVAGDLVEVKGGDRI 204 (1028)
T ss_dssp SSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSC-SEEEEEETTEEEEEEGGGCCTTCEEEEETTCBC
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeeEEEECCEEEEEEHHHCCcCCEEEECCCCEe
Confidence 0112357788777777777778888999988889999988765 789999999999999999999999999999999
Q ss_pred CccEEEEeeCCeEEeeccccCCCceeccCCCC---------CeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCC
Q 042091 244 PADGVLVTGHSLAIDESSMTGESKIVRKDHKT---------PFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNG 314 (1023)
Q Consensus 244 PaDgill~g~~l~VDES~LTGES~pv~K~~~~---------~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 314 (1023)
||||+|++|++|.||||+|||||.|+.|.+++ +++|+||.|.+|.++++|++||.+|++|+|++++.+++.
T Consensus 205 PaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 284 (1028)
T 2zxe_A 205 PADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEV 284 (1028)
T ss_dssp CSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCC
T ss_pred eceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCC
Confidence 99999999988899999999999999998764 479999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhh
Q 042091 315 EETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTI 394 (1023)
Q Consensus 315 ~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~i 394 (1023)
+++|+|+.+++++.+++.+++++++++++++++ .+. + +...+..+ +++
T Consensus 285 ~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~---~~~---~-------------------~~~~~~~~-------i~l 332 (1028)
T 2zxe_A 285 GRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---LGY---S-------------------WLEAVIFL-------IGI 332 (1028)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTC---C-------------------HHHHHHHH-------HHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccC---c-------------------HHHHHHHH-------HHH
Confidence 999999999999999999888888777665321 111 0 34556666 889
Q ss_pred hhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCC----
Q 042091 395 VVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDD---- 470 (1023)
Q Consensus 395 lv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~---- 470 (1023)
++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+.....
T Consensus 333 lv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 412 (1028)
T 2zxe_A 333 IVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQS 412 (1028)
T ss_dssp HHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCC
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999987654322110
Q ss_pred ---CCcccHHHHHHHHHHHHccCCCcccccCCC---CceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCC
Q 042091 471 ---SSQMHSIVIYLLSEGIAQNTTGNVFVPKDG---EAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEK 544 (1023)
Q Consensus 471 ---~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~---~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~ 544 (1023)
....++.. +.+..+.+.|+++......++ ...+..|||+|.|+++++.+.+.+....+..+++++++||+|+|
T Consensus 413 ~~~~~~~~~~~-~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~r 491 (1028)
T 2zxe_A 413 GAAFDKTSATW-SALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTN 491 (1028)
T ss_dssp SCCCCSSCHHH-HHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTT
T ss_pred ccccccCCHHH-HHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCccc
Confidence 00112222 233344455554433111111 12356899999999999998766666667788999999999999
Q ss_pred ceEEEEEeec---CCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccccC-
Q 042091 545 KRGGVAVKRI---NSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKW- 619 (1023)
Q Consensus 545 k~msviv~~~---~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~- 619 (1023)
|||+++++.+ ++++++++|||||.|+++|+++. .+|...+++++. +++.+.+++|+++|+||+++|||.++++.
T Consensus 492 k~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~ 570 (1028)
T 2zxe_A 492 KYQLSIHENEKSSESRYLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKY 570 (1028)
T ss_dssp CEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTS
T ss_pred ceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCcccc
Confidence 9999999864 46788999999999999999764 467777888766 78999999999999999999999875321
Q ss_pred -----------CCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC------
Q 042091 620 -----------TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE------ 682 (1023)
Q Consensus 620 -----------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~------ 682 (1023)
+..|.|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|++|||...+..
T Consensus 571 ~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~ 650 (1028)
T 2zxe_A 571 NEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIA 650 (1028)
T ss_dssp CTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHH
T ss_pred ccccccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHH
Confidence 234789999999999999999999999999999999999999999999999999999854221
Q ss_pred -------------CCCCeeeechhhhccCHHHHHHHHhhce--EeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHh
Q 042091 683 -------------ANDPNIIEGKVFRALSDKEREKVAQEIT--VMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747 (1023)
Q Consensus 683 -------------~~~~~vi~g~~~~~l~~~~~~~~~~~~~--v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL 747 (1023)
.....+++|+++..++++++++++.++. +|||++|+||.++|+.+|+.|++|+|+|||.||+|||
T Consensus 651 ~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paL 730 (1028)
T 2zxe_A 651 ARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPAL 730 (1028)
T ss_dssp HHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHH
T ss_pred hhcCcchhhccccccceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHH
Confidence 1124689999999999999999998885 9999999999999999999999999999999999999
Q ss_pred hhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHH
Q 042091 748 HEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAV 827 (1023)
Q Consensus 748 ~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~ 827 (1023)
++||||||||++|+++||++||+++.+++|+++++++++||++|+|+++++.|++++|+..++..+++.++..+.|++++
T Consensus 731 k~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~ 810 (1028)
T 2zxe_A 731 KKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTV 810 (1028)
T ss_dssp HHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHH
T ss_pred HhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHH
Confidence 99999999997799999999999999999999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCC-CCcchHHHHH-HHHHHHHHHHHHHHHHHhhhccccc-------
Q 042091 828 QLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKE-PLITNIMWRN-LIVQALYQVTVLLVLNFKGTSILHL------- 898 (1023)
Q Consensus 828 qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~------- 898 (1023)
|++|+|+++|.+|+++|++|+|++++|++||++++. +++++.+++. ++..+++++++.++.+++.....+.
T Consensus 811 qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 890 (1028)
T 2zxe_A 811 TILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIG 890 (1028)
T ss_dssp HHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhccCccchhhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhc
Confidence 999999999999999999999999999999998765 9999887665 4566788877665544332111000
Q ss_pred --------ccccc----cc---------ccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHHH
Q 042091 899 --------EGERR----QH---------ASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVL 957 (1023)
Q Consensus 899 --------~~~~~----~~---------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~ 957 (1023)
..... .. ....++|++|++++++|+||.+++|+.+ .++|+..++|++++.++++++++
T Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~-~~~~~~~~~n~~l~~~~~~~~~l 969 (1028)
T 2zxe_A 891 KRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRR-NSIFQQGMKNKILIFGLFEETAL 969 (1028)
T ss_dssp CHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS-SCHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccchhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCC-cchhccCCcCHHHHHHHHHHHHH
Confidence 00000 00 0125789999999999999999999864 45666558999999888888888
Q ss_pred HHHH--HHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 042091 958 QIII--IEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVP 1002 (1023)
Q Consensus 958 ~~~~--v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 1002 (1023)
|+++ +|+++.+|++.|+++.+|+++++++++.++++++.|++.|+
T Consensus 970 ~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~ 1016 (1028)
T 2zxe_A 970 AAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRR 1016 (1028)
T ss_dssp HHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7766 46789999999999999999999999999999999988653
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-131 Score=1265.84 Aligned_cols=885 Identities=28% Similarity=0.410 Sum_probs=742.4
Q ss_pred hhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC
Q 042091 89 AQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEG 168 (1023)
Q Consensus 89 ~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~ 168 (1023)
.|...++++.+.|+++..+||+++ |+.+|+++||+|+++.++.+++|+.+++||+++++++|++++++++++++...+
T Consensus 5 ~~~~~~~~~~~~l~~~~~~GLs~~--e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~ 82 (995)
T 3ar4_A 5 AHSKSTEECLAYFGVSETTGLTPD--QVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG 82 (995)
T ss_dssp GGGSCHHHHHHHHTCCTTTCBCHH--HHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCS
T ss_pred hhhCCHHHHHHHhCCCcccCCCHH--HHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 355678999999999988999987 899999999999999888899999999999999999999999999998876432
Q ss_pred --CccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCE--EEEEEeccceeccEEEecCCCccC
Q 042091 169 --VEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGK--AVKISIFDVVVGEIVPLRIGDQVP 244 (1023)
Q Consensus 169 --~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~--~~~I~~~dLv~GDIV~l~~Gd~VP 244 (1023)
....|++++.+++++++..+++.++++++++++++|.+..+ ..++|+|||+ .++|+++||||||+|.|++||+||
T Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~-~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IP 161 (995)
T 3ar4_A 83 EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEP-EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVP 161 (995)
T ss_dssp SGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSC-SEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCC
T ss_pred ccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccc
Confidence 12478898888888888888999999999999999988765 6899999987 699999999999999999999999
Q ss_pred ccEEEEe--eCCeEEeeccccCCCceeccCCCC------------CeeeccceEeecceeEEEEEEecccHHHHHHhhcc
Q 042091 245 ADGVLVT--GHSLAIDESSMTGESKIVRKDHKT------------PFLMSGCKVADGVGTMMVTGVGINTEWGLLMASIS 310 (1023)
Q Consensus 245 aDgill~--g~~l~VDES~LTGES~pv~K~~~~------------~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 310 (1023)
|||+|++ +++|.||||+|||||.|+.|.+++ +++|+||.|.+|.++++|++||.+|++|++++++.
T Consensus 162 aD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 241 (995)
T 3ar4_A 162 ADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA 241 (995)
T ss_dssp SEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHH
T ss_pred ccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhh
Confidence 9999965 445899999999999999998763 68999999999999999999999999999999999
Q ss_pred cCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhh
Q 042091 311 EDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAI 390 (1023)
Q Consensus 311 ~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 390 (1023)
+++.+++|+|+++++++.++.++.+++++++++++..++ .++.... .++..+..+|..+
T Consensus 242 ~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~----------~~~~~~~~~~~~a------ 300 (995)
T 3ar4_A 242 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF-----NDPVHGG----------SWIRGAIYYFKIA------ 300 (995)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG-----GSCSSSS----------CHHHHHHHHHHHH------
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccccc----------hHHHHHHHHHHHH------
Confidence 999999999999999999998887776666554321111 0110000 1122344556667
Q ss_pred hhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCccc-----
Q 042091 391 QVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKI----- 465 (1023)
Q Consensus 391 ~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~----- 465 (1023)
+++++++|||+||++++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+
T Consensus 301 -i~l~v~aiP~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~ 379 (995)
T 3ar4_A 301 -VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCS 379 (995)
T ss_dssp -HHHHHHHSCTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEE
T ss_pred -HHHHHHhcCcchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998753211
Q ss_pred -----------CCCCCC--------CcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCC-Ch
Q 042091 466 -----------NPPDDS--------SQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGM-KF 525 (1023)
Q Consensus 466 -----------~~~~~~--------~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~-~~ 525 (1023)
.+.... ....+.... +..+.+.|++..+...++++..+..|||+|.|++.++++.|. +.
T Consensus 380 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~ 458 (995)
T 3ar4_A 380 LNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVE-LATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNT 458 (995)
T ss_dssp EEEEEECCSSSSSCCCEEETTEECCGGGCHHHHH-HHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCC
T ss_pred cceeeccCCCcCCccccccccccccccccHHHHH-HHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccc
Confidence 111000 001122333 334445555544322222334456799999999999998776 11
Q ss_pred --h-------------cccccccEEEEecCCCCCceEEEEEeecCC-----eEEEEEeCchHHHHHhhccccccCCcccc
Q 042091 526 --D-------------RVRSETTVLHVFPFNSEKKRGGVAVKRINS-----EVHVHWKGAAEMILASCTKYLDTDGQLQS 585 (1023)
Q Consensus 526 --~-------------~~~~~~~il~~~~F~s~~k~msviv~~~~~-----~~~~~~KGa~e~il~~c~~~~~~~~~~~~ 585 (1023)
. ..+..+++++++||+|+||||+|+++.+++ ++.+++|||||.|+++|+++... +...+
T Consensus 459 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~-~~~~~ 537 (995)
T 3ar4_A 459 EVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVG-TTRVP 537 (995)
T ss_dssp CCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEET-TEEEE
T ss_pred cccccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcC-CCccc
Confidence 1 123468899999999999999999987655 57899999999999999876543 35567
Q ss_pred CCchH-HHHHHHHHHH--HhccchhhhhhhccccccC-----------CCCCCCcEEEeeeeccCCCcccHHHHHHHHHh
Q 042091 586 IDGDE-DFFKAAVDEM--AARSLRCVAIAYRFILDKW-----------TLPEEELILLAIVGIKDPCRPGVKDAVKLCRD 651 (1023)
Q Consensus 586 l~~~~-~~~~~~~~~~--a~~glr~l~~ayk~~~~~~-----------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ 651 (1023)
++++. +++.+.+++| +++|+||+++|||++.... +..|+|++|+|+++++||+||+++++|+.|++
T Consensus 538 l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~ 617 (995)
T 3ar4_A 538 MTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRD 617 (995)
T ss_dssp CCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHH
Confidence 77665 7888999999 9999999999999874321 12378999999999999999999999999999
Q ss_pred CCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCC
Q 042091 652 AGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGG 731 (1023)
Q Consensus 652 aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g 731 (1023)
+||+++|+|||+..||.++|+++||.....+ -...+++|+++..++++++.+.+.+..+|||++|+||.++|+.+|++|
T Consensus 618 ~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~-i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g 696 (995)
T 3ar4_A 618 AGIRVIMITGDNKGTAIAICRRIGIFGENEE-VADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYD 696 (995)
T ss_dssp TTCEEEEEESSCHHHHHHHHHHHTSSCTTCC-CTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTT
T ss_pred cCCEEEEECCCCHHHHHHHHHHcCcCCCCCc-ccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999864321 124689999999999999999999999999999999999999999999
Q ss_pred CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 042091 732 DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLI 811 (1023)
Q Consensus 732 ~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~ 811 (1023)
++|+|+|||.||+|||++|||||||| +|+++|+++||+++.+++|.++++++++||++|+||+|++.|++++|+..++.
T Consensus 697 ~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~ 775 (995)
T 3ar4_A 697 EITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVC 775 (995)
T ss_dssp CCEEEEECSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 042091 812 NVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFK 891 (1023)
Q Consensus 812 ~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 891 (1023)
.+++.+++.+.||+++|++|+|+++|.+|+++|+.++|++++|++||+.++++++++.+++.+++++++++++.++.+++
T Consensus 776 ~~~~~~~g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~ 855 (995)
T 3ar4_A 776 IFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAW 855 (995)
T ss_dssp HHHHHHTTCCCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89989988889999999999999999999999999999999999999999999999999888999999998766443222
Q ss_pred h-hccc--------ccc--c------ccc-----c-cccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHH
Q 042091 892 G-TSIL--------HLE--G------ERR-----Q-HASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFM 948 (1023)
Q Consensus 892 ~-~~~~--------~~~--~------~~~-----~-~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~ 948 (1023)
. .... .+. + ... . ......+|++|+++|++|+||.+++|+.+...++.++++|++++
T Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~ 935 (995)
T 3ar4_A 856 WFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLL 935 (995)
T ss_dssp HTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHH
T ss_pred HHHhcccccccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHH
Confidence 1 1000 000 0 000 0 00124689999999999999999999876555556888999988
Q ss_pred HHHHHHHHHHHHH--HHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 042091 949 GIIGITCVLQIII--IEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVP 1002 (1023)
Q Consensus 949 ~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 1002 (1023)
+++++++++++++ +|+++.+|++.|+++.+|+++++++++.+++++++|++.|+
T Consensus 936 ~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~ 991 (995)
T 3ar4_A 936 GSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARN 991 (995)
T ss_dssp HHHHHHHHHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8888777766544 57899999999999999999999999999999999998663
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-123 Score=1161.09 Aligned_cols=809 Identities=22% Similarity=0.325 Sum_probs=665.6
Q ss_pred HHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhH
Q 042091 98 SELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGA 177 (1023)
Q Consensus 98 ~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~ 177 (1023)
...|+++..+||+++ |+.+|+++||+|+++.++ +++|..++++|.++++++++++++++++++ .|.+++
T Consensus 77 ~~~l~t~~~~GLs~~--ea~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g--------~~~~~~ 145 (920)
T 1mhs_A 77 EDMLQTDTRVGLTSE--EVVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLE--------DWVDFG 145 (920)
T ss_dssp STTTTTCCCCCCCSH--HHHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCS--------CSSHHH
T ss_pred HHHhCCCcCCCCCHH--HHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hHHHHH
Confidence 456888888899998 899999999999999664 788889999999999999999998888765 688887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCC-eE
Q 042091 178 SIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHS-LA 256 (1023)
Q Consensus 178 ~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~-l~ 256 (1023)
.+++++++..+++.++++++++++++|++..+ ..++|+|||++++|+++||||||+|.|++||+|||||+|++|++ +.
T Consensus 146 ~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~-~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~ 224 (920)
T 1mhs_A 146 VICGLLLLNAVVGFVQEFQAGSIVDELKKTLA-LKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQ 224 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCC-SSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceee
Confidence 77777777889999999999999999988765 68999999999999999999999999999999999999999995 89
Q ss_pred EeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHH
Q 042091 257 IDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLA 336 (1023)
Q Consensus 257 VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~ 336 (1023)
||||+|||||.|+.|.+++ .+|+||.|.+|.++++|++||.+|++|++.+++.+++.+++|+|+.+++++.++.++.++
T Consensus 225 VDES~LTGES~PV~K~~gd-~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~ 303 (920)
T 1mhs_A 225 VDQSALTGESLAVDKHKGD-QVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIF 303 (920)
T ss_dssp EBCTTTSSCCCCEECCSSC-EECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eeccccCCCCcceEecCCC-eeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 599999999999999999999999999999999988888999999999999888776555
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHH
Q 042091 337 VAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMR 416 (1023)
Q Consensus 337 ~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~ 416 (1023)
+++++++. +++.+ . .+...|..+ +++++++|||+||++++++++.+++
T Consensus 304 ~~~i~~~~---~~~~~----~------------------~~~~~l~~a-------v~llV~aiP~aLp~~vti~la~g~~ 351 (920)
T 1mhs_A 304 TLLIVWVS---SFYRS----N------------------PIVQILEFT-------LAITIIGVPVGLPAVVTTTMAVGAA 351 (920)
T ss_dssp HHHHHHHT---TTTTT----C------------------CHHHHHHHH-------HHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHhcC----C------------------cHHHHHHHH-------HHHHHHhCchhHHHHHHHHHHHHHH
Confidence 54433321 11110 0 145667777 9999999999999999999999999
Q ss_pred HHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccc
Q 042091 417 KMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFV 496 (1023)
Q Consensus 417 ~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~ 496 (1023)
+|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+. +++ . +++..+..++...
T Consensus 352 ~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~~~--------~---~ll~~a~l~~~~~---- 415 (920)
T 1mhs_A 352 YLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-VDP--------E---DLMLTACLAASRK---- 415 (920)
T ss_dssp HHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-CCC--------T---HHHHHHHHSCCCS----
T ss_pred HHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-CCH--------H---HHHHHHHHhcCCc----
Confidence 99999999999999999999999999999999999999998865321 110 1 2232232232211
Q ss_pred cCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccc
Q 042091 497 PKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKY 576 (1023)
Q Consensus 497 ~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~ 576 (1023)
. ..+||+|.|+++++.+.+.. ......+++++.+||+|++|+|+++++.++++.++++|||||.|+++|+..
T Consensus 416 -~------~~~~P~e~Al~~~~~~~~~~-~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~ 487 (920)
T 1mhs_A 416 -K------KGIDAIDKAFLKSLKYYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEED 487 (920)
T ss_dssp -S------CSCCSHHHHHHHHHHHSSSC-CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCS
T ss_pred -c------cCCChHHHHHHHHHHhcccc-hhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhcccc
Confidence 0 01499999999998876542 223456889999999999999999998767777889999999999999741
Q ss_pred cccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCE
Q 042091 577 LDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVK 655 (1023)
Q Consensus 577 ~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~ 655 (1023)
.+++++. +.+.+.+++|+.+|+|++++|||. .|.+++|+|+++++||+||+++++|+.|+++||+
T Consensus 488 -------~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~-------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~ 553 (920)
T 1mhs_A 488 -------HPIPEEVDQAYKNKVAEFATRGFRSLGVARKR-------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLS 553 (920)
T ss_dssp -------SCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS-------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCE
T ss_pred -------CCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec-------cccccEEEEEEEEeccccccHHHHHHHHhhcCce
Confidence 2345544 678889999999999999999884 2578999999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEE
Q 042091 656 VRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVA 735 (1023)
Q Consensus 656 v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~ 735 (1023)
++|+|||++.||.+||+++||..... .....+++|. ..++++++.+.+.++.||+|++|+||.++|+.+|++|++|+
T Consensus 554 v~MiTGD~~~TA~aIA~~lGI~~~~~-~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Va 630 (920)
T 1mhs_A 554 IKMLTGDAVGIARETSRQLGLGTNIY-NAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVA 630 (920)
T ss_dssp EEEEESSCHHHHHHHHHHHTSSCSCC-CSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCE
T ss_pred EEEEcCCCHHHHHHHHHHcCCCcccc-CccceeecCc--ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEE
Confidence 99999999999999999999974321 1123456666 56777888888889999999999999999999999999999
Q ss_pred EEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 042091 736 VTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVA 815 (1023)
Q Consensus 736 ~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~ 815 (1023)
|+|||+||+||||+|||||||| +|+++||++||+++++++|+++++++++||++|+||+|++.|.++.|+....+..+.
T Consensus 631 m~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~ 709 (920)
T 1mhs_A 631 MTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLW 709 (920)
T ss_dssp ECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999875443333
Q ss_pred HHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 042091 816 AISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSI 895 (1023)
Q Consensus 816 ~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 895 (1023)
..+.+ .|+++.|++|+|+++|. |++++++|+++.+ ++|++++.+ .+++.++..+++.++..++.++..+.
T Consensus 710 ~~~~~-~~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~- 779 (920)
T 1mhs_A 710 IAILN-RSLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLP----KLWGMSVLLGVVLAVGTWITVTTMYA- 779 (920)
T ss_dssp HHSCS-CCCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSS----SCSSCHHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHh-ccCCHHHHHHHHHHHHH-HhhhhcccCcccc---cCCCCchHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 33333 34899999999999997 8999999998765 677765442 23333445555555443333322211
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHHHHHHHHHHHHHcccCCCCC
Q 042091 896 LHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLD 975 (1023)
Q Consensus 896 ~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 975 (1023)
....+ .........+|++|++++++|+|+.+++|+.+. +|++. .|+++++++++..++++++. +.+ +|++.|++
T Consensus 780 ~~~~~-~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~-~f~~~~l~ 853 (920)
T 1mhs_A 780 QGENG-GIVQNFGNMDEVLFLQISLTENWLIFITRANGP--FWSSI-PSWQLSGAIFLVDILATCFT-IWG-WFEHSDTS 853 (920)
T ss_dssp TTTTC-CSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSS--CSCCS-CTHHHHHHHHHHHHHHHHHH-SSS-STTSCSHH
T ss_pred hcccc-cccchhhHHHHHHHHHHHHHHHHHHHHhccchh--hhcCc-hHHHHHHHHHHHHHHHHHHH-Hhh-hhccCCCC
Confidence 00000 000112357899999999999999999998653 56654 78887777777766665553 344 88999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCCchhh
Q 042091 976 WKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVY 1009 (1023)
Q Consensus 976 ~~~w~~~~~~~~~~~~~~~~~k~~~~~~~p~~~~ 1009 (1023)
|.+|+++++++++.+++.++.|++.++...+.+.
T Consensus 854 ~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~fd~~ 887 (920)
T 1mhs_A 854 IVAVVRIWIFSFGIFCIMGGVYYILQDSVGFDNL 887 (920)
T ss_dssp HHTHHHHHHHTTHHHHHHHHHHHCCCCCCTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 9999999999999999999999988877766653
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-120 Score=1131.99 Aligned_cols=822 Identities=20% Similarity=0.290 Sum_probs=642.4
Q ss_pred hhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC
Q 042091 89 AQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEG 168 (1023)
Q Consensus 89 ~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~ 168 (1023)
.|...++++.+.|+++ .+||+++ |+.+|+++||+|+++.++ +++|+.++++|.++++++|+++++++++++.. ++
T Consensus 14 ~~~~~~~~~~~~l~~~-~~GLs~~--e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~-~~ 88 (885)
T 3b8c_A 14 LEKIPIEEVFQQLKCS-REGLTTQ--EGEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANG-DG 88 (885)
T ss_dssp CSSSSTTCCTTTSSSC-SSCSTHH--HHHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCC-TT
T ss_pred hHhCCHHHHHHHhCCC-CCCCCHH--HHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cc
Confidence 3445577788889998 6899987 899999999999999776 78888888999999999999999999887643 23
Q ss_pred CccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEE
Q 042091 169 VEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGV 248 (1023)
Q Consensus 169 ~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgi 248 (1023)
.+..|++++.+++++++..+++.+++++++++.++|.+..+ .+++|+|||++++|+++||||||+|.|++||+|||||+
T Consensus 89 ~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~-~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ 167 (885)
T 3b8c_A 89 RPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLA-PKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADAR 167 (885)
T ss_dssp SCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCS-CCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCC
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceE
Confidence 34579998877766666677888999999999999987765 68899999999999999999999999999999999999
Q ss_pred EEeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHH
Q 042091 249 LVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVAT 328 (1023)
Q Consensus 249 ll~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~ 328 (1023)
|++|++|.||||+|||||.|+.|.+++. +|+||.|.+|.++++|++||.+|++|++.+++++ ..+++|+|+.+++++.
T Consensus 168 ll~g~~l~VdES~LTGES~Pv~K~~g~~-v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~ 245 (885)
T 3b8c_A 168 LLEGDPLKVDQSALTGESLPVTKHPGQE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGN 245 (885)
T ss_dssp CCCSSCBCCCCCSTTCCSSCCCBSSCCC-CCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHH
T ss_pred EEEcCcccccccccCCCCcceEecCCCc-cccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHH
Confidence 9999988999999999999999999875 9999999999999999999999999999988876 6688999999999987
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHH
Q 042091 329 FIGI-VGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAV 407 (1023)
Q Consensus 329 ~i~~-~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav 407 (1023)
++.. +.+.++++++++ +++.+. . +...+..+ +++++++|||+||+++
T Consensus 246 ~~~~~~~~~~~~~~~~~---~~~~~~--------~--------------~~~~~~~~-------v~llv~aiP~aLp~~v 293 (885)
T 3b8c_A 246 FCICSIAIGMVIEIIVM---YPIQRR--------K--------------YRDGIDNL-------LVLLIGGIPIAMPTVL 293 (885)
T ss_dssp HHHHHHHHHHHHHSTTT---TTTTCS--------C--------------STTHHHHH-------HHHTTTTCCSSTTTHH
T ss_pred HHHHHHHHHHHHHHHHH---HHHccC--------c--------------HHHHHHHH-------HHHHHHHhhhHHHHHH
Confidence 6432 222222221111 111100 0 12344555 8999999999999999
Q ss_pred HHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHH
Q 042091 408 TLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIA 487 (1023)
Q Consensus 408 ~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~ 487 (1023)
++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+.++. .+.. ..++ .+++..+.+
T Consensus 294 ti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~-----~~~~--~~ll~~aa~ 364 (885)
T 3b8c_A 294 SVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCK-----GVEK--DQVLLFAAM 364 (885)
T ss_dssp HHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCS-----STTH--HHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCC-----CCCH--HHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999743311 0110 0111 123333333
Q ss_pred ccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchH
Q 042091 488 QNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAE 567 (1023)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e 567 (1023)
++. . .++||+|.|+++++.+ ....+..+++++.+||+|++|+|+++++..+++.++++|||||
T Consensus 365 ~~~-~------------~~~~p~~~Al~~~~~~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e 427 (885)
T 3b8c_A 365 ASR-V------------ENQDAIDAAMVGMLAD----PKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPE 427 (885)
T ss_dssp HCC-S------------SSCCSHHHHHHHTTCC----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGG
T ss_pred HhC-C------------CCCCchHHHHHHHhhc----hhhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHH
Confidence 321 1 1479999999987642 2223456778899999999999999887656777789999999
Q ss_pred HHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhcccccc-CCCCCCCcEEEeeeeccCCCcccHHHHH
Q 042091 568 MILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDK-WTLPEEELILLAIVGIKDPCRPGVKDAV 646 (1023)
Q Consensus 568 ~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I 646 (1023)
.++++|+.- .+..+.+.+.+++++++|+|++++|||.++++ .+..|++++|+|+++++||+|||++++|
T Consensus 428 ~il~~c~~~----------~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI 497 (885)
T 3b8c_A 428 QILELAKAS----------NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETI 497 (885)
T ss_dssp GTSSSSCCC----------STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHH
T ss_pred HHHHhccCc----------hhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHH
Confidence 999999631 00114577888999999999999999987543 3446788999999999999999999999
Q ss_pred HHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhc-cCHHHHHHHHhhceEeccCCHhhHHHHHH
Q 042091 647 KLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRA-LSDKEREKVAQEITVMGRSSPNDKLLLVQ 725 (1023)
Q Consensus 647 ~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~-l~~~~~~~~~~~~~v~ar~~P~~K~~iV~ 725 (1023)
++|+++||+++|+|||++.||.++|+++||..... ...+++|++++. ++++++++.+.++.||+|++|+||.++|+
T Consensus 498 ~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~---~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~ 574 (885)
T 3b8c_A 498 RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY---PSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVK 574 (885)
T ss_dssp HHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS---TTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHH
T ss_pred HHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC---CcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHH
Confidence 99999999999999999999999999999964321 124677888776 77778888999999999999999999999
Q ss_pred HHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 042091 726 ALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVN 805 (1023)
Q Consensus 726 ~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n 805 (1023)
.+|++|++|+|+|||+||+|||++|||||||| +|+++||++||+++.+++|+++++++++||++|+||+|++.|++++|
T Consensus 575 ~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n 653 (885)
T 3b8c_A 575 KLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 653 (885)
T ss_dssp HHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q 042091 806 VAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVL 885 (1023)
Q Consensus 806 v~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (1023)
+..++..+. ..+..+.|++|+|++|+|+++|..+ ++++.|++++. ++| +...+ +.++...++.++++++..
T Consensus 654 ~~~~~~~~~-~~~~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~ 724 (885)
T 3b8c_A 654 IRIVFGFML-IALIWEFDFSAFMVLIIAILNDGTI-MTISKDRVKPS---PTP---DSWKL-KEIFATGVVLGGYQAIMT 724 (885)
T ss_dssp TTTTSTTHH-HHSSCSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCC---CSTTT-TTTTTTHHHHHSSTHHHH
T ss_pred HHHHHHHHH-HHHccCcCcCHHHHHHHHHHHHHHH-HhhcccccCcc---cCC---cchhH-HHHHHHHHHHHHHHHHHH
Confidence 975443333 3335567999999999999999875 88888876542 222 33333 333444556666666655
Q ss_pred HHHHHhhhcc-c-c-ccccc-cccccccchhH-HHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHHHHHH
Q 042091 886 LVLNFKGTSI-L-H-LEGER-RQHASDVKNTM-IFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQII 960 (1023)
Q Consensus 886 ~~l~~~~~~~-~-~-~~~~~-~~~~~~~~~t~-~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 960 (1023)
+++++++... + . ..+.. ........+|. .|.+++++|+ +.|++|+.+ .++|+.. .|++++.+++..++++++
T Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 801 (885)
T 3b8c_A 725 VIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRS-WSFVERP-GALLMIAFLIAQLIATLI 801 (885)
T ss_dssp TTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCT-TTSTTST-TTTTSGGGSSTTTTTTSS
T ss_pred HHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHH-HHHHhccCC-CCcccCc-cHHHHHHHHHHHHHHHHH
Confidence 5444333210 0 0 00000 00001234454 5556778885 789999875 3344433 444444433333344433
Q ss_pred HHHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 042091 961 IIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVP 1002 (1023)
Q Consensus 961 ~v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 1002 (1023)
.+.....++++.|++|.+|+++++++++.+++.++.|++.+.
T Consensus 802 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~ 843 (885)
T 3b8c_A 802 AVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRY 843 (885)
T ss_dssp SSSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTT
T ss_pred HHhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332223456799999999999999999999999999987664
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-84 Score=796.19 Aligned_cols=512 Identities=26% Similarity=0.365 Sum_probs=439.5
Q ss_pred ccccchhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccccCceEEEEE-CCEEEEEEeccceeccEEEecCCCccCccE
Q 042091 170 EEGWYDGASIAFAV-FLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMR-GGKAVKISIFDVVVGEIVPLRIGDQVPADG 247 (1023)
Q Consensus 170 ~~~~~~~~~i~~~l-ll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R-~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDg 247 (1023)
.+.||+++++++++ ++..+++...+.+..+.+++|.+..+ ..++|+| ||++++|+++||+|||+|.|++||+|||||
T Consensus 184 ~~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p-~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg 262 (736)
T 3rfu_A 184 VAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVP-ESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDG 262 (736)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCC-CEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCE
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccE
Confidence 35789887665444 44446666666677778888888775 6788887 999999999999999999999999999999
Q ss_pred EEEeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHH
Q 042091 248 VLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVA 327 (1023)
Q Consensus 248 ill~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~ 327 (1023)
+|++|++ .||||+|||||.|+.|.+++. +++||.+.+|.++++|++||.+|.+|+|++++.+++.+++|+|+.+|+++
T Consensus 263 ~vl~G~~-~VDES~LTGES~Pv~K~~gd~-v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a 340 (736)
T 3rfu_A 263 EVQEGRS-FVDESMVTGEPIPVAKEASAK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVS 340 (736)
T ss_dssp EECSSCE-EEECSSSTTCSSCEEECTTCE-ECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHH
T ss_pred EEEECce-EeeecccCCccccEEeccCCc-CCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence 9999986 899999999999999999987 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHH
Q 042091 328 TFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAV 407 (1023)
Q Consensus 328 ~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav 407 (1023)
.+++++.++++++++++|+.+ +. .+ . +...+..+ +++++++|||+|++++
T Consensus 341 ~~~v~~vl~ia~~~~~~w~~~---~~--~~----~--------------~~~~l~~a-------i~vlviacPcaL~la~ 390 (736)
T 3rfu_A 341 GWFVPAVILVAVLSFIVWALL---GP--QP----A--------------LSYGLIAA-------VSVLIIACPCALGLAT 390 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---CS--SS----S--------------TTHHHHHH-------HHHHHHHCCSTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh---CC--Cc----h--------------HHHHHHHH-------HHhHHHhhhhHHHHHH
Confidence 999999999998888776432 21 00 0 23445666 9999999999999999
Q ss_pred HHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHH
Q 042091 408 TLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIA 487 (1023)
Q Consensus 408 ~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~ 487 (1023)
|+++..++.+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+. + .++.+.+ +.+
T Consensus 391 p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~--~--------~~~~l~~---aa~ 457 (736)
T 3rfu_A 391 PMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDF--V--------EDNALAL---AAA 457 (736)
T ss_dssp HHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSS--C--------HHHHHHH---HHH
T ss_pred HHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCC--C--------HHHHHHH---HHH
Confidence 99999999999999999999999999999999999999999999999999984321 0 1222222 111
Q ss_pred ccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchH
Q 042091 488 QNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAE 567 (1023)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e 567 (1023)
. ++.++||+++|+++++++.+.... ...+|++.+++ ++....++..+ .+|+++
T Consensus 458 l--------------e~~s~hPla~Aiv~~a~~~~~~~~---------~~~~f~~~~g~-gv~~~~~g~~~---~~G~~~ 510 (736)
T 3rfu_A 458 L--------------EHQSEHPLANAIVHAAKEKGLSLG---------SVEAFEAPTGK-GVVGQVDGHHV---AIGNAR 510 (736)
T ss_dssp H--------------HHSSCCHHHHHHHHHHHTTCCCCC---------CCSCCCCCTTT-EEEECSSSSCE---EEESHH
T ss_pred H--------------hhcCCChHHHHHHHHHHhcCCCcc---------CcccccccCCc-eEEEEECCEEE---EEcCHH
Confidence 1 123579999999999987765432 23467777664 45555455443 459998
Q ss_pred HHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHH
Q 042091 568 MILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVK 647 (1023)
Q Consensus 568 ~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~ 647 (1023)
.+.+.+.. .+.+.+..++++.+|+|++++| .|.+++|+++++|++|++++++|+
T Consensus 511 ~~~~~~~~--------------~~~~~~~~~~~~~~G~~vl~va------------~d~~~~G~i~i~D~i~~~~~~aI~ 564 (736)
T 3rfu_A 511 LMQEHGGD--------------NAPLFEKADELRGKGASVMFMA------------VDGKTVALLVVEDPIKSSTPETIL 564 (736)
T ss_dssp HHHHHCCC--------------CHHHHHHHHHHHHTTCEEEEEE------------ETTEEEEEEEEECCBCSSHHHHHH
T ss_pred HHHHcCCC--------------hhHHHHHHHHHHhcCCeEEEEE------------ECCEEEEEEEeeccchhhHHHHHH
Confidence 87654321 0346677889999999999999 567999999999999999999999
Q ss_pred HHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHH
Q 042091 648 LCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQAL 727 (1023)
Q Consensus 648 ~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l 727 (1023)
+|+++|++++|+|||+..+|.++|+++||. .++++++|+||.++|+.+
T Consensus 565 ~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~--------------------------------~v~a~~~P~~K~~~v~~l 612 (736)
T 3rfu_A 565 ELQQSGIEIVMLTGDSKRTAEAVAGTLGIK--------------------------------KVVAEIMPEDKSRIVSEL 612 (736)
T ss_dssp HHHHHTCEEEEECSSCHHHHHHHHHHHTCC--------------------------------CEECSCCHHHHHHHHHHH
T ss_pred HHHHCCCeEEEECCCCHHHHHHHHHHcCCC--------------------------------EEEEecCHHHHHHHHHHH
Confidence 999999999999999999999999999997 379999999999999999
Q ss_pred HhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 042091 728 RKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVA 807 (1023)
Q Consensus 728 q~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~ 807 (1023)
|++|+.|+|+|||.||+|||++|||||||| +|+++++++||+++.++++.++.+++++||++++||++|+.|++.||++
T Consensus 613 ~~~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~ 691 (736)
T 3rfu_A 613 KDKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVL 691 (736)
T ss_dssp HHHSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 042091 808 ALLINV 813 (1023)
Q Consensus 808 ~i~~~~ 813 (1023)
.++++.
T Consensus 692 ~iplAa 697 (736)
T 3rfu_A 692 GVPLAA 697 (736)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888754
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-82 Score=767.11 Aligned_cols=507 Identities=26% Similarity=0.374 Sum_probs=420.0
Q ss_pred ccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEE
Q 042091 172 GWYDGASIAFAVFLV-IVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLV 250 (1023)
Q Consensus 172 ~~~~~~~i~~~lll~-~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill 250 (1023)
.||+.++++++++++ .+++...+.|..+..+++.+..+ .+++|+|||++++|+++||+|||+|.|++||+|||||+|+
T Consensus 94 ~~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~-~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl 172 (645)
T 3j08_A 94 SFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQA-KTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV 172 (645)
T ss_dssp SCCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSC-SEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEE
Confidence 377876655544432 23344444444455677776665 6899999999999999999999999999999999999999
Q ss_pred eeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHH
Q 042091 251 TGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFI 330 (1023)
Q Consensus 251 ~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i 330 (1023)
+|++ .||||+|||||.|+.|.+++. +|+||.+.+|.++++|++||.+|.+|++++++++++.+++|+|+.+++++.++
T Consensus 173 ~G~~-~VdeS~LTGES~Pv~K~~g~~-v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~ 250 (645)
T 3j08_A 173 EGES-YVDESMISGEPVPVLKSKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYF 250 (645)
T ss_dssp ECCE-EEECHHHHCCSSCEEECTTCE-ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHH
T ss_pred ECcE-EEEcccccCCCCceecCCCCE-eeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHH
Confidence 9985 999999999999999999886 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHH
Q 042091 331 GIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLT 410 (1023)
Q Consensus 331 ~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~ 410 (1023)
.++.++++++++++|. +... .+ | ...+..+ +++++++|||+|++++|++
T Consensus 251 ~~~vl~~a~~~~~~~~---~~~~--~~-----~--------------~~~~~~~-------i~vlvia~P~aL~la~p~a 299 (645)
T 3j08_A 251 IPTVLLVAISAFIYWY---FIAH--AP-----L--------------LFAFTTL-------IAVLVVACPCAFGLATPTA 299 (645)
T ss_dssp HHHHHHHHHHHHHCSS---CCCS--CS-----C--------------CCTTTTT-------HHHHHHHSCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---HhcC--Cc-----H--------------HHHHHHH-------HHHHHHHhhhHHHHHHHHH
Confidence 8888877777665431 1110 00 1 1122333 8899999999999999999
Q ss_pred HHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccC
Q 042091 411 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNT 490 (1023)
Q Consensus 411 l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~ 490 (1023)
+..++.+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+. ..++.+.+ +.+..
T Consensus 300 ~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~----------~~~~~l~~---aa~~e- 365 (645)
T 3j08_A 300 LTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------DERELLRL---AAIAE- 365 (645)
T ss_dssp HHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSS----------CHHHHHHH---HHHHH-
T ss_pred HHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCC----------CHHHHHHH---HHHHh-
Confidence 99999999999999999999999999999999999999999999999987531 01222222 11111
Q ss_pred CCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHH
Q 042091 491 TGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMIL 570 (1023)
Q Consensus 491 ~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il 570 (1023)
..+.||+++|+++++.+.|....... +|++..++ ++.. . .+.+|+++.+.
T Consensus 366 -------------~~s~hPla~Aiv~~a~~~g~~~~~~~---------~~~~~~g~-g~~~----~---~v~~g~~~~~~ 415 (645)
T 3j08_A 366 -------------RRSEHPIAEAIVKKALEHGIELGEPE---------KVEVIAGE-GVVA----D---GILVGNKRLME 415 (645)
T ss_dssp -------------TTCCSHHHHHHHHHHHHTTCCCCSCC---------CCEEETTT-EEEE----T---TEEEECHHHHH
T ss_pred -------------hcCCChhHHHHHHHHHhcCCCcCCcc---------ceEEecCC-ceEE----E---EEEECCHHHHH
Confidence 23579999999999998876543321 12111111 2221 1 24568887664
Q ss_pred HhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHH
Q 042091 571 ASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCR 650 (1023)
Q Consensus 571 ~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~ 650 (1023)
+.... .+ +.+.+..++++.+|+|+++++ .|++++|+++++|++||+++++|+.|+
T Consensus 416 ~~~~~----------~~---~~~~~~~~~~~~~g~~~l~va------------~~~~~~G~i~~~D~l~~~~~~~i~~L~ 470 (645)
T 3j08_A 416 DFGVA----------VS---NEVELALEKLEREAKTAVIVA------------RNGRVEGIIAVSDTLKESAKPAVQELK 470 (645)
T ss_dssp HTTCC----------CC---HHHHHHHHHHHTTTCCCEEEE------------ETTEEEEEEEEECCCTTTHHHHHHHHH
T ss_pred hcCCC----------cc---HHHHHHHHHHHhcCCeEEEEE------------ECCEEEEEEEecCCchhHHHHHHHHHH
Confidence 43211 11 456778889999999999999 578999999999999999999999999
Q ss_pred hCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhC
Q 042091 651 DAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKG 730 (1023)
Q Consensus 651 ~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~ 730 (1023)
++|++++|+|||+..+|.++|+++|+. .++++++|++|.++++.+|++
T Consensus 471 ~~Gi~v~~~TGd~~~~a~~ia~~lgi~--------------------------------~~~~~~~P~~K~~~v~~l~~~ 518 (645)
T 3j08_A 471 RMGIKVGMITGDNWRSAEAISRELNLD--------------------------------LVIAEVLPHQKSEEVKKLQAK 518 (645)
T ss_dssp HTTCEEEEECSSCHHHHHHHHHHHTCS--------------------------------EEECSCCTTCHHHHHHHHTTT
T ss_pred HCCCEEEEEeCCCHHHHHHHHHHcCCC--------------------------------EEEEeCCHHhHHHHHHHHhhC
Confidence 999999999999999999999999997 479999999999999999998
Q ss_pred CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 042091 731 GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALL 810 (1023)
Q Consensus 731 g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~ 810 (1023)
+.|+|+|||.||+|||++||+||||| +|++.++++||+++.++++.++.+++++||++++||++|+.|+++||++.++
T Consensus 519 -~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~ 596 (645)
T 3j08_A 519 -EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIP 596 (645)
T ss_dssp -CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999 9999999999999999999999999999999999999999999999999877
Q ss_pred HHHHH
Q 042091 811 INVVA 815 (1023)
Q Consensus 811 ~~~~~ 815 (1023)
+.+.+
T Consensus 597 la~~~ 601 (645)
T 3j08_A 597 AAAGL 601 (645)
T ss_dssp HHTTT
T ss_pred HHHHh
Confidence 75543
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-81 Score=772.94 Aligned_cols=506 Identities=26% Similarity=0.374 Sum_probs=421.8
Q ss_pred cchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEe
Q 042091 173 WYDGASIAFAVFLV-IVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVT 251 (1023)
Q Consensus 173 ~~~~~~i~~~lll~-~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~ 251 (1023)
||+.++++++++++ .+++...+.+..+..+++.+..+ ..++|+|||++++|+++||+|||+|.|++||+|||||+|++
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~-~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~ 251 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQA-KTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE 251 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSC-SEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE
Confidence 77876655444432 24444444444556777776665 68999999999999999999999999999999999999999
Q ss_pred eCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHH
Q 042091 252 GHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIG 331 (1023)
Q Consensus 252 g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~ 331 (1023)
|++ .||||+|||||.|+.|.+++. +|+||.+.+|.++++|+++|.+|.+|++++++++++.+++|+|+.+++++.++.
T Consensus 252 G~~-~VdeS~LTGES~pv~K~~g~~-v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~ 329 (723)
T 3j09_A 252 GES-YVDESMISGEPVPVLKSKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 329 (723)
T ss_dssp CCE-EEECHHHHCCSSCEEECTTCE-ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHH
T ss_pred CCe-EEecccccCCCcceeecCCCe-eccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 985 899999999999999999886 999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHH
Q 042091 332 IVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTL 411 (1023)
Q Consensus 332 ~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l 411 (1023)
++.++++++++++|. +... .+ +...+..+ +++++++|||+|++++|+++
T Consensus 330 ~~vl~~a~~~~~~~~---~~~~--~~-------------------~~~~~~~~-------i~vlvia~P~aL~la~p~a~ 378 (723)
T 3j09_A 330 PTVLLVAISAFIYWY---FIAH--AP-------------------LLFAFTTL-------IAVLVVACPCAFGLATPTAL 378 (723)
T ss_dssp HHHHHHHHHHHTTSC---SSTT--CT-------------------TCCSHHHH-------HHHHHHHSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---HhcC--Cc-------------------HHHHHHHH-------HHHHHhhhhHHHHHHHHHHH
Confidence 888877777665431 1110 00 11234445 88999999999999999999
Q ss_pred HHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCC
Q 042091 412 AYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTT 491 (1023)
Q Consensus 412 ~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~ 491 (1023)
..++.+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+. ..++.+.+ +.+..
T Consensus 379 ~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~----------~~~~~l~~---aa~~e-- 443 (723)
T 3j09_A 379 TVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------DERELLRL---AAIAE-- 443 (723)
T ss_dssp HHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSS----------CHHHHHHH---HHHHH--
T ss_pred HHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCC----------CHHHHHHH---HHHHh--
Confidence 9999999999999999999999999999999999999999999999987531 01222222 11111
Q ss_pred CcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHH
Q 042091 492 GNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILA 571 (1023)
Q Consensus 492 ~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~ 571 (1023)
..+.||+++|+++++.+.|....... +|++..+ .++.. . .+.+|+++.+.+
T Consensus 444 ------------~~s~hP~~~Ai~~~a~~~~~~~~~~~---------~~~~~~g-~g~~~----~---~~~~g~~~~~~~ 494 (723)
T 3j09_A 444 ------------RRSEHPIAEAIVKKALEHGIELGEPE---------KVEVIAG-EGVVA----D---GILVGNKRLMED 494 (723)
T ss_dssp ------------TTCCSHHHHHHHHHHHHTTCCCCSCC---------CCEEETT-TEEEE----T---TEEEECHHHHHH
T ss_pred ------------ccCCCchhHHHHHHHHhcCCCcCCcc---------ceEEecC-CceEE----E---EEEECCHHHHHh
Confidence 23579999999999998876543321 1211111 12221 1 245688876644
Q ss_pred hhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHh
Q 042091 572 SCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRD 651 (1023)
Q Consensus 572 ~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ 651 (1023)
.... .+ +.+.+.+++++.+|+|++++| .|++++|+++++|++||+++++|+.|++
T Consensus 495 ~~~~----------~~---~~~~~~~~~~~~~g~~~~~va------------~~~~~~G~i~i~D~~~~~~~~~i~~l~~ 549 (723)
T 3j09_A 495 FGVA----------VS---NEVELALEKLEREAKTAVIVA------------RNGRVEGIIAVSDTLKESAKPAVQELKR 549 (723)
T ss_dssp TTCC----------CC---HHHHHHHHHHHTTTCEEEEEE------------ETTEEEEEEEEECCSCTTHHHHHHHHHH
T ss_pred cCCC----------cc---HHHHHHHHHHHhcCCeEEEEE------------ECCEEEEEEeecCCcchhHHHHHHHHHH
Confidence 3211 11 457778889999999999999 5789999999999999999999999999
Q ss_pred CCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCC
Q 042091 652 AGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGG 731 (1023)
Q Consensus 652 aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g 731 (1023)
+|++++|+|||+..+|.++|+++|+. .++++++|+||.++|+.+|++
T Consensus 550 ~Gi~v~~~TGd~~~~a~~ia~~lgi~--------------------------------~~~~~~~P~~K~~~v~~l~~~- 596 (723)
T 3j09_A 550 MGIKVGMITGDNWRSAEAISRELNLD--------------------------------LVIAEVLPHQKSEEVKKLQAK- 596 (723)
T ss_dssp TTCEEEEECSSCHHHHHHHHHHHTCS--------------------------------EEECSCCTTCHHHHHHHHTTT-
T ss_pred CCCEEEEECCCCHHHHHHHHHHcCCc--------------------------------EEEccCCHHHHHHHHHHHhcC-
Confidence 99999999999999999999999997 479999999999999999998
Q ss_pred CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 042091 732 DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLI 811 (1023)
Q Consensus 732 ~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~ 811 (1023)
+.|+|+|||.||+|||++|||||||| +|++.++++||+++.++++.++.+++++||++++||++|+.|+++||++.+++
T Consensus 597 ~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 675 (723)
T 3j09_A 597 EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPA 675 (723)
T ss_dssp CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999 99999999999999999999999999999999999999999999999998877
Q ss_pred HHHH
Q 042091 812 NVVA 815 (1023)
Q Consensus 812 ~~~~ 815 (1023)
.+.+
T Consensus 676 a~~~ 679 (723)
T 3j09_A 676 AAGL 679 (723)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 6544
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.4e-32 Score=294.81 Aligned_cols=260 Identities=27% Similarity=0.386 Sum_probs=199.2
Q ss_pred HHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCC
Q 042091 413 YSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTG 492 (1023)
Q Consensus 413 ~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~ 492 (1023)
.++.+++++|+++|+++++|.|+++++||||||||||+|+|.|.++. +. ++.+.++.
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~------~~--------~~~l~~~~--------- 60 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI------GD--------SLSLAYAA--------- 60 (263)
Confidence 36788999999999999999999999999999999999999998764 00 11111110
Q ss_pred cccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHh
Q 042091 493 NVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILAS 572 (1023)
Q Consensus 493 ~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~ 572 (1023)
..+..+.||...|+.+++...|...... ..|... ...++.....+..+ .-|.++
T Consensus 61 --------~~e~~s~hp~a~ai~~~~~~~g~~~~~~---------~~~~~~-~G~g~~~~~~~~~~---~~G~~~----- 114 (263)
T 2yj3_A 61 --------SVEALSSHPIAKAIVKYAKEQGVKILEV---------KDFKEI-SGIGVRGKISDKII---EVKKAE----- 114 (263)
Confidence 0113468999999999887665432111 011100 00111000000000 001110
Q ss_pred hccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhC
Q 042091 573 CTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDA 652 (1023)
Q Consensus 573 c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a 652 (1023)
++.+ +.++ .+..+.|.+.+.|+++|++.++++.|+++
T Consensus 115 ------------------------------~~~~-~~~~------------~~~~~~~~~~~~~~~~~g~~~~l~~L~~~ 151 (263)
T 2yj3_A 115 ------------------------------NNND-IAVY------------INGEPIASFNISDVPRPNLKDYLEKLKNE 151 (263)
Confidence 2223 3333 34468999999999999999999999999
Q ss_pred CCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCC
Q 042091 653 GVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGD 732 (1023)
Q Consensus 653 Gi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~ 732 (1023)
|+++.|+|||+..++..+++++|+.. +|+...|++|..+++.++..++
T Consensus 152 g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------------------~f~~~~p~~k~~~~~~l~~~~~ 199 (263)
T 2yj3_A 152 GLKIIILSGDKEDKVKELSKELNIQE--------------------------------YYSNLSPEDKVRIIEKLKQNGN 199 (263)
Confidence 99999999999999999999999863 4566779999999999999999
Q ss_pred EEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHH
Q 042091 733 VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKF 797 (1023)
Q Consensus 733 ~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~ 797 (1023)
.|+|||||.||++|++.||+|+++| ++++.+++.||+++.++++..+..+++.+|+++++|++|
T Consensus 200 ~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 200 KVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 9999999999999999999999999 889999999999999889999999999999999999986
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-25 Score=244.98 Aligned_cols=280 Identities=28% Similarity=0.389 Sum_probs=207.2
Q ss_pred HHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCC
Q 042091 413 YSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTG 492 (1023)
Q Consensus 413 ~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~ 492 (1023)
-+.++++++|+++|+++++|+++++++||||||||||.+.+.+.+++..+. ..++++.+. .++ .
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------~~~~~l~~~-~~~--e--- 71 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------DERELLRLA-AIA--E--- 71 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------CHHHHHHHH-HHH--T---
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----------CHHHHHHHH-HHH--h---
Confidence 366889999999999999999999999999999999999999998876532 112232221 111 0
Q ss_pred cccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHh
Q 042091 493 NVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILAS 572 (1023)
Q Consensus 493 ~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~ 572 (1023)
..+.||++.|+.+++.+.|....... .+... .++++.. . -+.+|.++.+.+.
T Consensus 72 -----------~~s~hp~~~a~~~~~~~~g~~~~~~~----~~~~~------~G~~~~~----~---~~~~g~~~~~~~~ 123 (287)
T 3a1c_A 72 -----------RRSEHPIAEAIVKKALEHGIELGEPE----KVEVI------AGEGVVA----D---GILVGNKRLMEDF 123 (287)
T ss_dssp -----------TTCCSHHHHHHHHHHHHTTCCCCCCS----CEEEE------TTTEEEE----T---TEEEECHHHHHHT
T ss_pred -----------hcCCCHHHHHHHHHHHhcCCCccccc----cceee------cCCCeEE----E---EEEECCHHHHHhc
Confidence 23579999999999988876532111 01111 0112211 1 1345665544322
Q ss_pred hccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhC
Q 042091 573 CTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDA 652 (1023)
Q Consensus 573 c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a 652 (1023)
+. +++ +.+.+..+.+..+|.++++++ .+..+.+.+..+++++|++.++++.|+++
T Consensus 124 ~~----------~~~---~~~~~~~~~~~~~g~~~i~~~------------~d~~~~~~~~~~~~~~~g~~~~l~~L~~~ 178 (287)
T 3a1c_A 124 GV----------AVS---NEVELALEKLEREAKTAVIVA------------RNGRVEGIIAVSDTLKESAKPAVQELKRM 178 (287)
T ss_dssp TC----------CCC---HHHHHHHHHHHHTTCEEEEEE------------ETTEEEEEEEEECCBCTTHHHHHHHHHHT
T ss_pred CC----------Ccc---HHHHHHHHHHHhCCCeEEEEE------------ECCEEEEEEEeccccchhHHHHHHHHHHC
Confidence 11 111 234555677888999999988 45679999999999999999999999999
Q ss_pred CCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCC
Q 042091 653 GVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGD 732 (1023)
Q Consensus 653 Gi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~ 732 (1023)
|+++.++||++...+..+.+.+|+. ..|....|..|...++.++.. +
T Consensus 179 g~~~~i~T~~~~~~~~~~l~~~gl~--------------------------------~~f~~i~~~~K~~~~~~l~~~-~ 225 (287)
T 3a1c_A 179 GIKVGMITGDNWRSAEAISRELNLD--------------------------------LVIAEVLPHQKSEEVKKLQAK-E 225 (287)
T ss_dssp TCEEEEECSSCHHHHHHHHHHHTCS--------------------------------EEECSCCTTCHHHHHHHHTTT-C
T ss_pred CCeEEEEeCCCHHHHHHHHHHhCCc--------------------------------eeeeecChHHHHHHHHHHhcC-C
Confidence 9999999999999999999999986 356677799999999999988 8
Q ss_pred EEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhH
Q 042091 733 VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQ 795 (1023)
Q Consensus 733 ~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~ 795 (1023)
.++|+||+.||.+|.+.|+++++++ ++.+..++.+|+++.++++..+..+++.+|+++++|+
T Consensus 226 ~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 226 VVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp CEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred eEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999998 7777777889999988899999999999999999985
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.92 E-value=5.9e-26 Score=211.91 Aligned_cols=110 Identities=27% Similarity=0.415 Sum_probs=101.2
Q ss_pred HHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCCCCeee
Q 042091 200 QFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLM 279 (1023)
Q Consensus 200 ~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~l~ 279 (1023)
++++|.++.+ ..++|+|||++++|++++|+|||+|.|++||+|||||++++|+ +.||||+|||||.|+.|.+++. +|
T Consensus 2 al~~L~~l~p-~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~g~~-v~ 78 (113)
T 2hc8_A 2 AIKKLVGLQA-KTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGDE-VF 78 (113)
T ss_dssp HHHHHHHHSC-SEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTCE-EC
T ss_pred HHHHHhcCCC-CEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECCCCE-EE
Confidence 3456666654 6899999999999999999999999999999999999999998 5999999999999999999875 99
Q ss_pred ccceEeecceeEEEEEEecccHHHHHHhhcccC
Q 042091 280 SGCKVADGVGTMMVTGVGINTEWGLLMASISED 312 (1023)
Q Consensus 280 aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 312 (1023)
+||.+.+|.+.++|+++|.+|++|+|++++.++
T Consensus 79 aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 79 GATINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp TTCEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred eCCEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 999999999999999999999999999988653
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=233.93 Aligned_cols=276 Identities=26% Similarity=0.364 Sum_probs=198.4
Q ss_pred cccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCcee
Q 042091 425 VRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVE 504 (1023)
Q Consensus 425 vr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~ 504 (1023)
+|+++++|+|++++.|||||+||||.|+|+|.++...+. ...+...++. ++. .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~----------~~~~~~~~~~-~~~----------------~ 53 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH----------SEDELLQIAA-SLE----------------A 53 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS----------CHHHHHHHHH-HHH----------------T
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC----------CHHHHHHHHH-Hhh----------------c
Confidence 589999999999999999999999999999999876432 1222332221 111 1
Q ss_pred ecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccc
Q 042091 505 VSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQ 584 (1023)
Q Consensus 505 ~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~ 584 (1023)
.+.+|...++.+.+...|...... ..+...+ ..++.....+..+ ..|.++.+.......
T Consensus 54 ~s~~~~~~a~~~~~~~~g~~~~~~----~~~~~~~------g~~~~~~~~~~~~---~~~~~~~~~~~~~~~-------- 112 (280)
T 3skx_A 54 RSEHPIAAAIVEEAEKRGFGLTEV----EEFRAIP------GKGVEGIVNGRRY---MVVSPGYIRELGIKT-------- 112 (280)
T ss_dssp TCCSHHHHHHHHHHHHTTCCCCCC----EEEEEET------TTEEEEEETTEEE---EEECHHHHHHTTCCC--------
T ss_pred cCCCHHHHHHHHHHHhcCCCCCCc----cceeecC------CCEEEEEECCEEE---EEecHHHHHHcCCCc--------
Confidence 246899999999998887653221 1112221 1122212222222 336666654433211
Q ss_pred cCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCH
Q 042091 585 SIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNL 664 (1023)
Q Consensus 585 ~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~ 664 (1023)
+ +....+..++.+.+.++ .+..++|.+.+.|+++|++.++++.|+++|+++.++||++.
T Consensus 113 --~-------~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~ 171 (280)
T 3skx_A 113 --D-------ESVEKLKQQGKTVVFIL------------KNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNR 171 (280)
T ss_dssp --C-------TTHHHHHTTTCEEEEEE------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCH
T ss_pred --h-------HHHHHHHhCCCeEEEEE------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCH
Confidence 1 12234555666666665 45678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCH
Q 042091 665 QTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDA 744 (1023)
Q Consensus 665 ~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~ 744 (1023)
..+..+.+++|+. ..|....|.+|...++.+++.. .++|+||+.||.
T Consensus 172 ~~~~~~~~~~gl~--------------------------------~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi 218 (280)
T 3skx_A 172 FVAKWVAEELGLD--------------------------------DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDA 218 (280)
T ss_dssp HHHHHHHHHHTCS--------------------------------EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTH
T ss_pred HHHHHHHHHcCCh--------------------------------hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhH
Confidence 9999999999996 3577888999999999998876 469999999999
Q ss_pred HHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHH
Q 042091 745 PALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLT 803 (1023)
Q Consensus 745 ~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 803 (1023)
+|++.|++|++|| ++.+..++.||+++..+++..+..+++.+|++++++++++.|++.
T Consensus 219 ~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 219 PALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred HHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999 899999999999999999999999999999999999999998764
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-25 Score=211.10 Aligned_cols=116 Identities=23% Similarity=0.346 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHhccccCceEEEEECCE------EEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCc
Q 042091 194 DYRQSLQFQNLNKEKRNIQLEAMRGGK------AVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESK 267 (1023)
Q Consensus 194 ~~~~~~~~~~l~~~~~~~~~~V~R~g~------~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~ 267 (1023)
+++..+++++|.++.+ ..++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.
T Consensus 2 ~~ka~~~l~~L~~l~p-~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~ 79 (124)
T 2kij_A 2 SFTMSEALAKLISLQA-TEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAM 79 (124)
T ss_dssp ----CCHHHHHHHTCC-SEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSS
T ss_pred hHHHHHHHHHHhccCC-CEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCc
Confidence 4566677888887765 7899999764 6899999999999999999999999999999997 999999999999
Q ss_pred eeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccC
Q 042091 268 IVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISED 312 (1023)
Q Consensus 268 pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 312 (1023)
|+.|.+++. +|+||.+.+|.+.++|+++|.+|.+|+|++++.++
T Consensus 80 pv~k~~g~~-v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 80 PVAKKPGST-VIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp CEECCTTEE-ECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred cEEeCCCCE-EEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 999999875 99999999999999999999999999999998764
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.81 E-value=6.2e-21 Score=211.80 Aligned_cols=145 Identities=13% Similarity=0.128 Sum_probs=113.6
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCC-CCCeeeechhhhc-cCHHHHHHHHhhceE
Q 042091 634 IKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEA-NDPNIIEGKVFRA-LSDKEREKVAQEITV 711 (1023)
Q Consensus 634 ~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~-~~~~vi~g~~~~~-l~~~~~~~~~~~~~v 711 (1023)
..+++||+++++++.|+++|++++|+|||+..++.++|+++|+....... ......+.+.+.. ... +.+.+
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~-------~~i~~ 210 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKG-------ELIHV 210 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECS-------SCCCT
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccc-------cccch
Confidence 35799999999999999999999999999999999999999997542100 0000011111000 000 01245
Q ss_pred eccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHh---hhCCccEEecC------CCCHHHHhccCccccCCChhHHHH
Q 042091 712 MGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL---HEADIGLAMGI------QGTEVAKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 712 ~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL---~~AdvgIamg~------~g~~~ak~~adiil~~~~~~~i~~ 782 (1023)
+++..|.+|...+..+++.++.|+|+|||+||+||+ ++||+|||||. ++++.+++++|+||++|++..++.
T Consensus 211 ~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~ 290 (297)
T 4fe3_A 211 FNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVN 290 (297)
T ss_dssp TCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHH
T ss_pred hhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHH
Confidence 677889999999999999999999999999999995 49999999995 567778999999999999999998
Q ss_pred HHH
Q 042091 783 VVR 785 (1023)
Q Consensus 783 ~i~ 785 (1023)
+|-
T Consensus 291 ~il 293 (297)
T 4fe3_A 291 SIL 293 (297)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.2e-19 Score=178.85 Aligned_cols=129 Identities=22% Similarity=0.311 Sum_probs=110.1
Q ss_pred cCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCcccc
Q 042091 506 SGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQS 585 (1023)
Q Consensus 506 ~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~ 585 (1023)
.+||+|.|+++++...+ ....+..+++++++||+|+||||+++++.+++++++++|||||.|+++|+.+. .+|...+
T Consensus 32 ~~n~~d~Ail~~~~~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~-~~g~~~~ 108 (170)
T 3gwi_A 32 LKNLLDTAVLEGTDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVR-HNGEIVP 108 (170)
T ss_dssp CCCHHHHHHHHTSCHHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEE-ETTEEEE
T ss_pred CCChHHHHHHHHHHhcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHh-cCCCccc
Confidence 37999999999875432 23445678999999999999999999987777889999999999999999875 4788889
Q ss_pred CCchH-HHHHHHHHHHHhccchhhhhhhccccccC----CCCCCCcEEEeeeeccCC
Q 042091 586 IDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKW----TLPEEELILLAIVGIKDP 637 (1023)
Q Consensus 586 l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~----~~~e~~l~~lG~i~~~D~ 637 (1023)
++++. +.+.+.+++|+++|+|||++|||.++... ...|+||+|+|++||-|.
T Consensus 109 l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 109 LDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 99877 89999999999999999999999986432 236899999999999885
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2.3e-13 Score=140.14 Aligned_cols=137 Identities=16% Similarity=0.222 Sum_probs=112.9
Q ss_pred EEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHh
Q 042091 628 LLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQ 707 (1023)
Q Consensus 628 ~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~ 707 (1023)
.++.+.++|.. +++.|+++|+++.++||++...+..+++++|+..
T Consensus 43 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~----------------------------- 87 (189)
T 3mn1_A 43 EIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH----------------------------- 87 (189)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE-----------------------------
T ss_pred EeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH-----------------------------
Confidence 44445544433 9999999999999999999999999999999973
Q ss_pred hceEeccCCHhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCC----hhH
Q 042091 708 EITVMGRSSPNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDN----FAS 779 (1023)
Q Consensus 708 ~~~v~ar~~P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~----~~~ 779 (1023)
+|... .+|...++.+.++ .+.++|+||+.||.+|++.|+++++++ ++.+.+++.||+++.+++ +..
T Consensus 88 ---~f~~~--~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~ 161 (189)
T 3mn1_A 88 ---LFQGR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAARE 161 (189)
T ss_dssp ---EECSC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHH
T ss_pred ---HhcCc--CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHH
Confidence 23322 5666777666654 467999999999999999999999999 899999999999998763 677
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHH
Q 042091 780 VVKVVRWGRSVFANIQKFIQFQLTVN 805 (1023)
Q Consensus 780 i~~~i~~gR~~~~~i~~~i~~~l~~n 805 (1023)
+.+.+..+|..++++++++.|.+.+|
T Consensus 162 l~~~l~~~~~~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 162 FCELILSAQGNLEAAHSVYLEGHHHH 187 (189)
T ss_dssp HHHHHHHHTTCHHHHHHTTSTTC---
T ss_pred HHHHHHHccCcHHHHHHHHhcccccc
Confidence 88888899999999999999999887
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.26 E-value=6.4e-12 Score=141.54 Aligned_cols=154 Identities=15% Similarity=0.145 Sum_probs=111.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCC--CCCeeeechhhhccCHHHHHHHHhhceEecc
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEA--NDPNIIEGKVFRALSDKEREKVAQEITVMGR 714 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~--~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar 714 (1023)
+++|++.+.++.|+++|+++.++||+....+..+++++|+....... .....++|..... ....+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~-------------~~~~k 244 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGE-------------VVSAQ 244 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESC-------------CCCHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeeccc-------------ccChh
Confidence 79999999999999999999999999999999999999996311000 0000111110000 01122
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhh
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANI 794 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i 794 (1023)
..|+....+.+.++-..+.++|+|||.||.+|++.|++|++| ++.+..++.||+++..+++.++..+++.......++
T Consensus 245 pk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~ 322 (335)
T 3n28_A 245 TKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKL 322 (335)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCC
T ss_pred hhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhh
Confidence 334444444444444457799999999999999999999999 789999999999999999999999999888888999
Q ss_pred HHHHHHHHHHH
Q 042091 795 QKFIQFQLTVN 805 (1023)
Q Consensus 795 ~~~i~~~l~~n 805 (1023)
++++.|.+.||
T Consensus 323 ~~~~~~~~~~~ 333 (335)
T 3n28_A 323 SWKSKEGHHHH 333 (335)
T ss_dssp CCC--------
T ss_pred ccccccccccc
Confidence 99999999987
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.19 E-value=3.7e-11 Score=127.41 Aligned_cols=150 Identities=17% Similarity=0.190 Sum_probs=111.7
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee--chhh-hc---------------
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE--GKVF-RA--------------- 696 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~--g~~~-~~--------------- 696 (1023)
...+.+++.++|++|+++|++++++||++...+..+++++|+..+....+++.+.+ |+.+ ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999865333333344432 3322 00
Q ss_pred ----------------------cCHHHHHHHHh--hceEe-----ccCCH--hhHHHHHHHHHhC----CCEEEEEcCCc
Q 042091 697 ----------------------LSDKEREKVAQ--EITVM-----GRSSP--NDKLLLVQALRKG----GDVVAVTGDGT 741 (1023)
Q Consensus 697 ----------------------l~~~~~~~~~~--~~~v~-----ar~~P--~~K~~iV~~lq~~----g~~V~~iGDG~ 741 (1023)
.++++++++.. .+.+. ....| .+|...++.+.++ .+.++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 01222222222 12222 11224 6899999888764 24699999999
Q ss_pred cCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 742 NDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 742 ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++++
T Consensus 180 nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999 899999999999999888899998886
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.6e-11 Score=125.22 Aligned_cols=113 Identities=16% Similarity=0.238 Sum_probs=89.5
Q ss_pred HHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHH
Q 042091 645 AVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLV 724 (1023)
Q Consensus 645 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV 724 (1023)
+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...+
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------~~~~~--k~k~~~~ 105 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------IYQGQ--DDKVQAY 105 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE--------------------------------EECSC--SSHHHHH
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE--------------------------------EeeCC--CCcHHHH
Confidence 4999999999999999999999999999999973 23333 4455655
Q ss_pred HHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhH----HHHHHHHHHHHHH
Q 042091 725 QALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFAS----VVKVVRWGRSVFA 792 (1023)
Q Consensus 725 ~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~----i~~~i~~gR~~~~ 792 (1023)
+.+.++ .+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++-.+ +.+.+...|..+.
T Consensus 106 ~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~~~~ 180 (195)
T 3n07_A 106 YDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNELD 180 (195)
T ss_dssp HHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcccHH
Confidence 555443 457999999999999999999999999 899999999999998776444 4444444444333
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.8e-10 Score=117.46 Aligned_cols=132 Identities=17% Similarity=0.162 Sum_probs=104.3
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCH
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSP 717 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P 717 (1023)
+.++..++|+.|+++|+++.++||++...+..+++++|+.. .|...
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------~~~~~-- 81 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------FFLGK-- 81 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE--------------------------------EEESC--
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce--------------------------------eecCC--
Confidence 44567899999999999999999999999999999999973 12111
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHH----HHHHHHHH
Q 042091 718 NDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVV----KVVRWGRS 789 (1023)
Q Consensus 718 ~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~----~~i~~gR~ 789 (1023)
..|...++.+.++ | +.++|+||+.||.+|++.|+++++|+ ++.+..++.||+++.+++..++. +.+...|.
T Consensus 82 k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~ 160 (180)
T 1k1e_A 82 LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQG 160 (180)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcC
Confidence 3456665554433 3 67999999999999999999999998 89999999999999887655555 33444667
Q ss_pred HHHhhHHHHHHHHHH
Q 042091 790 VFANIQKFIQFQLTV 804 (1023)
Q Consensus 790 ~~~~i~~~i~~~l~~ 804 (1023)
.+++++.++.|....
T Consensus 161 ~~~~~~~~~~~~~~~ 175 (180)
T 1k1e_A 161 KSSVFDTAQGFLKSV 175 (180)
T ss_dssp CTHHHHCHHHHHHHG
T ss_pred chhhhhhccchhhhh
Confidence 788888877776543
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.11 E-value=7.8e-11 Score=121.35 Aligned_cols=123 Identities=16% Similarity=0.134 Sum_probs=100.3
Q ss_pred HHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec--cCCHhhHHH
Q 042091 645 AVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG--RSSPNDKLL 722 (1023)
Q Consensus 645 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a--r~~P~~K~~ 722 (1023)
+++.|+++|+++.++||++...+..+++++|+.. +|. ...|+-...
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~--------------------------------~~~~~kpk~~~~~~ 101 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH--------------------------------YYKGQVDKRSAYQH 101 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE--------------------------------EECSCSSCHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc--------------------------------ceeCCCChHHHHHH
Confidence 4999999999999999999999999999999973 222 235666666
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCC----hhHHHHHHHHHHHHHHhhHHHH
Q 042091 723 LVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDN----FASVVKVVRWGRSVFANIQKFI 798 (1023)
Q Consensus 723 iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~----~~~i~~~i~~gR~~~~~i~~~i 798 (1023)
+++.++-..+.++|+||+.||.+|++.|+++++|+ ++.+..++.||+++.+++ +..+.+.+...|..+.++.+.+
T Consensus 102 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~ 180 (191)
T 3n1u_A 102 LKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGY 180 (191)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHH
Confidence 66666655677999999999999999999999999 899999999999999877 4455666666777777766655
Q ss_pred HH
Q 042091 799 QF 800 (1023)
Q Consensus 799 ~~ 800 (1023)
.+
T Consensus 181 ~~ 182 (191)
T 3n1u_A 181 LK 182 (191)
T ss_dssp HT
T ss_pred Hh
Confidence 44
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.01 E-value=4.4e-10 Score=117.42 Aligned_cols=98 Identities=17% Similarity=0.221 Sum_probs=85.1
Q ss_pred HHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHH
Q 042091 645 AVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLV 724 (1023)
Q Consensus 645 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV 724 (1023)
+++.|+++|+++.++||++...+..+++++|+.. +|... .+|...+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~--------------------------------~f~~~--k~K~~~l 129 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH--------------------------------LYQGQ--SDKLVAY 129 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE--------------------------------EECSC--SSHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch--------------------------------hhccc--CChHHHH
Confidence 8999999999999999999999999999999973 33333 5677777
Q ss_pred HHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCCh
Q 042091 725 QALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNF 777 (1023)
Q Consensus 725 ~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~ 777 (1023)
+.+.++ .+.++|+||+.||.+|++.|+++++++ ++.+.+++.||+++.+++-
T Consensus 130 ~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~ 185 (211)
T 3ij5_A 130 HELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGG 185 (211)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTT
T ss_pred HHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCC
Confidence 766654 567999999999999999999999999 8899999999999987643
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.01 E-value=3.8e-10 Score=113.34 Aligned_cols=112 Identities=19% Similarity=0.187 Sum_probs=90.6
Q ss_pred CcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHH--HcCCCCCCCCCCCCeeeechhhhccCHHHH
Q 042091 625 ELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIAL--ECGILGSDAEANDPNIIEGKVFRALSDKER 702 (1023)
Q Consensus 625 ~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~--~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~ 702 (1023)
+...++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ ++|+.
T Consensus 30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 3456777887777 3899999999999999999 67888888 55653
Q ss_pred HHHHhhceEeccCCHhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChh
Q 042091 703 EKVAQEITVMGRSSPNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFA 778 (1023)
Q Consensus 703 ~~~~~~~~v~ar~~P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~ 778 (1023)
++. .+.+|...++.+.++ .+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++-.
T Consensus 77 --------~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~~ 145 (168)
T 3ewi_A 77 --------TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGGR 145 (168)
T ss_dssp --------EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTTT
T ss_pred --------EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCCc
Confidence 111 135688877777654 357999999999999999999999999 99999999999999877665
Q ss_pred HH
Q 042091 779 SV 780 (1023)
Q Consensus 779 ~i 780 (1023)
++
T Consensus 146 G~ 147 (168)
T 3ewi_A 146 GA 147 (168)
T ss_dssp TH
T ss_pred cH
Confidence 53
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.99 E-value=6.6e-10 Score=112.76 Aligned_cols=104 Identities=13% Similarity=0.182 Sum_probs=86.7
Q ss_pred HHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHH
Q 042091 645 AVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLV 724 (1023)
Q Consensus 645 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV 724 (1023)
+++.|+++|+++.++||+....+..+++++|+. . ++.. ..|...+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~--------------------------------~~~~--~~k~~~l 91 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-V--------------------------------LHGI--DRKDLAL 91 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-E--------------------------------EESC--SCHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-e--------------------------------EeCC--CChHHHH
Confidence 899999999999999999999999999999985 1 1222 5566666
Q ss_pred HHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHH
Q 042091 725 QALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 725 ~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i 784 (1023)
+.+.++ .+.++|+||+.||.+|++.|+++++|+ ++.+..++.||+++.+++..+++..+
T Consensus 92 ~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 92 KQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 666554 367999999999999999999999999 89999999999999987755554443
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=3.8e-09 Score=115.87 Aligned_cols=68 Identities=21% Similarity=0.248 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 718 NDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 718 ~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
.+|...++.+.++ .+.|+++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-+++.++|+.
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 4688888777664 246999999999999999999999999 9999999999999999999999999863
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.90 E-value=4e-09 Score=115.03 Aligned_cols=67 Identities=31% Similarity=0.460 Sum_probs=59.8
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 719 DKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 719 ~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
+|...++.+.++ .+.|+++||+.||.+|++.|++|+||| ++.+.+|+.||+++.+++-.++..+|++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 788888777664 346999999999999999999999999 9999999999999999999999998864
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.9e-09 Score=115.76 Aligned_cols=149 Identities=20% Similarity=0.172 Sum_probs=104.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCee---------------------------
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNI--------------------------- 688 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~v--------------------------- 688 (1023)
..+.+.+.+++++++++|+++++.||+....+..+.+++|+.......+++.+
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 45788999999999999999999999999999999999998632110000000
Q ss_pred --------eechh-------------------------hhc-------------cCHHHHHHH-------Hh-hceEe-c
Q 042091 689 --------IEGKV-------------------------FRA-------------LSDKEREKV-------AQ-EITVM-G 713 (1023)
Q Consensus 689 --------i~g~~-------------------------~~~-------------l~~~~~~~~-------~~-~~~v~-a 713 (1023)
..+.. +.. -+.+.+.++ +. ...+. +
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 00000 000 012222221 11 12211 1
Q ss_pred -----cCC--HhhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCc--cccCCChhHH
Q 042091 714 -----RSS--PNDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI--IILDDNFASV 780 (1023)
Q Consensus 714 -----r~~--P~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adi--il~~~~~~~i 780 (1023)
... ...|...++.+.++ | +.++++||+.||.+|++.|++|+||| ++.+..|+.||+ ++.+++-+++
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGv 275 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAV 275 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHH
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchH
Confidence 122 24688888888764 3 46999999999999999999999999 999999999995 6778888999
Q ss_pred HHHHH
Q 042091 781 VKVVR 785 (1023)
Q Consensus 781 ~~~i~ 785 (1023)
.++|+
T Consensus 276 a~~i~ 280 (285)
T 3pgv_A 276 PRYLR 280 (285)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98886
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=2.7e-09 Score=106.64 Aligned_cols=105 Identities=20% Similarity=0.192 Sum_probs=85.0
Q ss_pred HHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHH
Q 042091 645 AVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLV 724 (1023)
Q Consensus 645 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV 724 (1023)
+++.|+++|+++.++||++...+..+++++|+.. .|... ..|...+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------------------~~~~~--kpk~~~~ 84 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY--------------------------------LFQGV--VDKLSAA 84 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE--------------------------------EECSC--SCHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE--------------------------------eeccc--CChHHHH
Confidence 8999999999999999999999999999999973 22222 2344444
Q ss_pred HHHHh----CCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhH-HHHHH
Q 042091 725 QALRK----GGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFAS-VVKVV 784 (1023)
Q Consensus 725 ~~lq~----~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~-i~~~i 784 (1023)
+.+.+ ..+.++|+||+.||.+|++.|+++++++ ++.+..++.||+++.+++..+ +.+++
T Consensus 85 ~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~ 148 (164)
T 3e8m_A 85 EELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFV 148 (164)
T ss_dssp HHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHH
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHH
Confidence 43333 3457999999999999999999999998 899999999999999888555 44444
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.84 E-value=5.4e-09 Score=114.49 Aligned_cols=67 Identities=21% Similarity=0.178 Sum_probs=60.0
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 718 NDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 718 ~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.+|...++.+.++ | +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-+++.++|+
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 3688888887664 3 46999999999999999999999999 999999999999999999999999886
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.81 E-value=1.6e-08 Score=108.98 Aligned_cols=67 Identities=22% Similarity=0.218 Sum_probs=58.1
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 719 DKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 719 ~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
+|...++.+.++ .+.|+++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-+++.++++.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 566666666553 356999999999999999999999999 9999999999999999899999998863
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=111.10 Aligned_cols=68 Identities=21% Similarity=0.205 Sum_probs=59.9
Q ss_pred hhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 718 NDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 718 ~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
..|...++.+.++ .+.++++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-+++.+++++
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 3587777776654 456999999999999999999999999 9999999999999999999999999864
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.78 E-value=5.7e-09 Score=117.15 Aligned_cols=151 Identities=16% Similarity=0.237 Sum_probs=104.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeech------------------hhhccC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGK------------------VFRALS 698 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~------------------~~~~l~ 698 (1023)
++++++.++++.|++ |+.+.++||++...+..+.+.+++..... ...+..+ .+....
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 177 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELH----GTEVDFDSIAVPEGLREELLSIIDVIASLSG 177 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEE----EEBCCGGGCCCCHHHHHHHHHHHHHHHHCCH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhc----ccccchhhhccccccceeEEecCHHHHhhhh
Confidence 578999999999999 99999999999777777788877742100 0000000 000000
Q ss_pred HHHHHHHHhhc-------eEe---ccCCHhhHHHHHHHHHhCC--CEEEEEcCCccCHHHhhhC----CccEEecCCCCH
Q 042091 699 DKEREKVAQEI-------TVM---GRSSPNDKLLLVQALRKGG--DVVAVTGDGTNDAPALHEA----DIGLAMGIQGTE 762 (1023)
Q Consensus 699 ~~~~~~~~~~~-------~v~---ar~~P~~K~~iV~~lq~~g--~~V~~iGDG~ND~~aL~~A----dvgIamg~~g~~ 762 (1023)
++++ +.+.++ .+. --..+.+|...++.++... +.|+++|||.||.+|++.| ++|||| ++.+
T Consensus 178 ~~~l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~ 254 (332)
T 1y8a_A 178 EELF-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNE 254 (332)
T ss_dssp HHHH-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCH
T ss_pred HHHH-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCH
Confidence 1222 111110 011 1123678999888776543 5599999999999999999 999999 7899
Q ss_pred HHHhccCccccCCChhHHHHHH----HHHHHHHHhhHH
Q 042091 763 VAKENSDIIILDDNFASVVKVV----RWGRSVFANIQK 796 (1023)
Q Consensus 763 ~ak~~adiil~~~~~~~i~~~i----~~gR~~~~~i~~ 796 (1023)
.+|+.||+++.+++..++..++ .+||..+ ++-+
T Consensus 255 ~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~ 291 (332)
T 1y8a_A 255 YALKHADVVIISPTAMSEAKVIELFMERKERAF-EVLS 291 (332)
T ss_dssp HHHTTCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGG
T ss_pred HHHhhCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHH
Confidence 9999999999998887777665 5688777 5555
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.77 E-value=6.6e-09 Score=115.05 Aligned_cols=68 Identities=25% Similarity=0.264 Sum_probs=60.5
Q ss_pred HhhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+..|...++.+.++ | +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-+++.++|+
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 35788888877664 2 45999999999999999999999999 999999999999999999999999987
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.2e-08 Score=111.19 Aligned_cols=66 Identities=27% Similarity=0.351 Sum_probs=48.5
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 719 DKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 719 ~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+|...++.+.++ .+.|+++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHH
Confidence 588888877664 246999999999999999999999999 999999999999999888888988874
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.73 E-value=2.7e-08 Score=105.49 Aligned_cols=150 Identities=19% Similarity=0.228 Sum_probs=106.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee-chhh---------------h----
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE-GKVF---------------R---- 695 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~-g~~~---------------~---- 695 (1023)
..+.+...+++++++++|++++++||+....+..+.+.+|+.......+++.+.. |+.+ .
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 3577889999999999999999999999999999999999864222222222221 1100 0
Q ss_pred --------------------ccCHHHHHHHHhh----ceEec-----cC--CHhhHHHHHHHHHhC----CCEEEEEcCC
Q 042091 696 --------------------ALSDKEREKVAQE----ITVMG-----RS--SPNDKLLLVQALRKG----GDVVAVTGDG 740 (1023)
Q Consensus 696 --------------------~l~~~~~~~~~~~----~~v~a-----r~--~P~~K~~iV~~lq~~----g~~V~~iGDG 740 (1023)
....+..+++..+ ..+.+ .. ....|...++.+.++ .+.++++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 0023333333332 22221 11 234688888777654 3568999999
Q ss_pred ccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 741 TNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 741 ~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
.||.+|++.|+++++|+ ++.+..++.||+++.+.+-.++.+++++
T Consensus 179 ~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp GGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 99999999999999999 8888889999999988877888888863
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.8e-08 Score=116.79 Aligned_cols=139 Identities=18% Similarity=0.220 Sum_probs=107.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCC--CCCeeeechhhhccCHHHHHHHHhhceEecc
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEA--NDPNIIEGKVFRALSDKEREKVAQEITVMGR 714 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~--~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar 714 (1023)
+++|++.+.++.|+++|+++.++||.....+..+++.+|+....... .....++|+... .-
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~-----------------~v 318 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVG-----------------PI 318 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECS-----------------SC
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEcc-----------------CC
Confidence 79999999999999999999999999999999999999996321000 000111221110 11
Q ss_pred CCHhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHH
Q 042091 715 SSPNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSV 790 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~ 790 (1023)
..+..|.++++.+.++ .+.++|+|||.||.+|++.|++|+++ ++.+..++.||+++..+++..++.++.++|.-
T Consensus 319 ~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 319 IDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 2366777777766554 25699999999999999999999999 57888899999999999999999999888776
Q ss_pred HHhh
Q 042091 791 FANI 794 (1023)
Q Consensus 791 ~~~i 794 (1023)
+.+.
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.71 E-value=1.3e-08 Score=105.85 Aligned_cols=133 Identities=20% Similarity=0.158 Sum_probs=97.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec-c
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG-R 714 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a-r 714 (1023)
-+++|++.+.++.|+++|+++.++|+.....+..+.+.+|+..... .++..++-. + ...+.. -
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~-----~~~~~~~~~-~----------~~~~~~~~ 137 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFS-----NTLIVENDA-L----------NGLVTGHM 137 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE-----EEEEEETTE-E----------EEEEEESC
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcc-----ceeEEeCCE-E----------EeeeccCC
Confidence 3689999999999999999999999999999999999999874211 111100000 0 000000 1
Q ss_pred CCHhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 715 SSPNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
.....|..+++.+.++ .+.++++||+.||.+|++.|+++++| ++.+..++.||+++.++++..+..++.|
T Consensus 138 ~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp CSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 1244566666555443 35689999999999999999999999 6788889999999999999999888775
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.70 E-value=2.1e-08 Score=108.64 Aligned_cols=68 Identities=25% Similarity=0.356 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 718 NDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 718 ~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
.+|...++.+.++ .+.|+++||+.||.+|++.|++|+||| ++.+.+|+.||+++.+++-+++.+++++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 4677777777664 346999999999999999999999999 9999999999999999999999999863
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.64 E-value=7.9e-08 Score=105.12 Aligned_cols=149 Identities=19% Similarity=0.203 Sum_probs=104.3
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCC---CCCCCCCeeee---chh----------------
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGS---DAEANDPNIIE---GKV---------------- 693 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~---~~~~~~~~vi~---g~~---------------- 693 (1023)
..+.+.+.++|++++++|+++++.||+....+..+.+++|+... ....+++.+.+ |+.
T Consensus 21 ~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~~~~i~~ 100 (282)
T 1rkq_A 21 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 100 (282)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 35778899999999999999999999999999999999998531 11111111110 000
Q ss_pred -------------------------------------------hhcc-------------CHHHHHHHHh--------hc
Q 042091 694 -------------------------------------------FRAL-------------SDKEREKVAQ--------EI 709 (1023)
Q Consensus 694 -------------------------------------------~~~l-------------~~~~~~~~~~--------~~ 709 (1023)
+..+ ++++++++.. .+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~ 180 (282)
T 1rkq_A 101 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 180 (282)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCE
Confidence 0000 1112222111 12
Q ss_pred eEe------ccCCH--hhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCCh
Q 042091 710 TVM------GRSSP--NDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNF 777 (1023)
Q Consensus 710 ~v~------ar~~P--~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~ 777 (1023)
.+. ....| .+|...++.+.++ .+.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-
T Consensus 181 ~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~ 259 (282)
T 1rkq_A 181 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLE 259 (282)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTT
T ss_pred EEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCc
Confidence 221 11222 3788888887664 346899999999999999999999999 8899999999999998888
Q ss_pred hHHHHHHH
Q 042091 778 ASVVKVVR 785 (1023)
Q Consensus 778 ~~i~~~i~ 785 (1023)
.++.++++
T Consensus 260 dGV~~~l~ 267 (282)
T 1rkq_A 260 DGVAFAIE 267 (282)
T ss_dssp THHHHHHH
T ss_pred chHHHHHH
Confidence 89998886
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=6.9e-08 Score=98.87 Aligned_cols=107 Identities=17% Similarity=0.249 Sum_probs=84.8
Q ss_pred HHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHH
Q 042091 644 DAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLL 723 (1023)
Q Consensus 644 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~i 723 (1023)
.+++.|+++|+++.++||++...+..+++++|+.. +|... ..|...
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~--------------------------------~~~~~--kpk~~~ 105 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH--------------------------------LYQGQ--SNKLIA 105 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE--------------------------------EECSC--SCSHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce--------------------------------eecCC--CCCHHH
Confidence 48999999999999999999999999999999873 22222 234444
Q ss_pred HHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHH-HHHH
Q 042091 724 VQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVV-KVVR 785 (1023)
Q Consensus 724 V~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~-~~i~ 785 (1023)
++.+.++ | +.++|+||+.||.++++.|+++++++ ++.+..++.||+++.+.+..+++ ++++
T Consensus 106 ~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 106 FSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 4444332 3 57999999999999999999999998 77788888999999887666655 5554
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=4.7e-08 Score=100.88 Aligned_cols=128 Identities=23% Similarity=0.306 Sum_probs=90.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc-C
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR-S 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar-~ 715 (1023)
++.|++.++++.|+++|+++.++||+....+..+.+.+|+..... .........+. ..+... +
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-------------~~~~~~~~ 139 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA---NRLIVKDGKLT-------------GDVEGEVL 139 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE---EEEEEETTEEE-------------EEEECSSC
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEE---eeeEEECCEEc-------------CCcccCcc
Confidence 567899999999999999999999999998888899998852100 00000000000 000011 2
Q ss_pred CHhhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHH
Q 042091 716 SPNDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~ 782 (1023)
.+..|...+..+.++ | +.++++||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 140 ~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 140 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp STTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred CCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 245776666655443 3 45999999999999999999999997 55677889999998766776544
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.61 E-value=3.2e-08 Score=110.06 Aligned_cols=131 Identities=18% Similarity=0.244 Sum_probs=96.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe-ccC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM-GRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~-ar~ 715 (1023)
+++|++.+.++.|+++|+++.++||.....+..+.+++|+..... .....++..+.. .+. .-.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~---~~l~~~dg~~tg-------------~i~~~~~ 242 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFS---NTVEIRDNVLTD-------------NITLPIM 242 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE---ECEEEETTEEEE-------------EECSSCC
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEE---EEEEeeCCeeee-------------eEecccC
Confidence 489999999999999999999999999999999999999963211 001111100000 000 012
Q ss_pred CHhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 716 SPNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.+..|.++++.+.++ .+.++|+||+.||.+|++.|++|++++ +.+..++.||.++..+++..+..+++
T Consensus 243 ~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 243 NAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp CHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 345666666555442 356999999999999999999999994 77888899999998889988877664
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.8e-07 Score=93.00 Aligned_cols=118 Identities=12% Similarity=0.119 Sum_probs=89.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
...+++.++++.|+++|+++.++||.+...+..+.+++|+... .++ ....
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~---------~~~---------------------~kp~ 85 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI---------YTG---------------------SYKK 85 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE---------EEC---------------------C--C
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh---------ccC---------------------CCCC
Confidence 3467789999999999999999999999999999999998631 111 1122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHH-HHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVV-KVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~-~~i~ 785 (1023)
|+--..+++.+.-..+.++++||+.||.++.+.|+++++++ ++.+..++.||+++.+.+-.+++ .+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~~~~~~ 154 (162)
T 2p9j_A 86 LEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGALREVAE 154 (162)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHHHHHHH
Confidence 33223333433333457999999999999999999999998 78888888999999887766666 4443
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=3.2e-07 Score=90.19 Aligned_cols=143 Identities=16% Similarity=0.232 Sum_probs=89.8
Q ss_pred CccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHc-C
Q 042091 444 KTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKL-G 522 (1023)
Q Consensus 444 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~-g 522 (1023)
..||+|-|+++++++...+. .++ .++|..+.+.. ..+.||+++|++++|++. +
T Consensus 13 ~~~tit~gnr~vt~v~~~~g----------~~e--~elL~lAAs~E--------------~~SeHPla~AIv~~A~~~~~ 66 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG----------VDE--KTLADAAQLAS--------------LADETPEGRSIVILAKQRFN 66 (156)
T ss_dssp --------CEEEEEEEECTT----------SCH--HHHHHHHHHTT--------------SSCCSHHHHHHHHHHHHHTT
T ss_pred CCCceecCCCeEEEEEecCC----------CCH--HHHHHHHHHHh--------------CcCCCHHHHHHHHHHHHhcC
Confidence 47999999999999875321 111 12333222221 236799999999999977 6
Q ss_pred CChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHh
Q 042091 523 MKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAA 602 (1023)
Q Consensus 523 ~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~ 602 (1023)
.......+ ......+|++..++.||.+ ++. -+.+|+++.|.+.+.. .|. .++ +.+.+.+++++.
T Consensus 67 l~~~~~~~--~~~~~~~F~a~~G~~Gv~v--~G~---~v~vGn~~~i~~l~~~----~gi--~~~---~~~~~~~~~la~ 130 (156)
T 1svj_A 67 LRERDVQS--LHATFVPFTAQSRMSGINI--DNR---MIRKGSVDAIRRHVEA----NGG--HFP---TDVDQKVDQVAR 130 (156)
T ss_dssp CCCCCHHH--HTCEEEEEETTTTEEEEEE--TTE---EEEEEEHHHHHHHHHH----HTC--CCC---HHHHHHHHHHHH
T ss_pred CCcccccc--cccceeeccccCCCCeEEE--CCE---EEEEeCcHHHHHHHHH----cCC--CCc---HHHHHHHHHHHh
Confidence 65432200 0123578998888788843 332 3567998877766543 111 111 346778889999
Q ss_pred ccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcc
Q 042091 603 RSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRP 640 (1023)
Q Consensus 603 ~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~ 640 (1023)
+|.+++++| .|..++|++++.|++||
T Consensus 131 ~G~T~v~VA------------~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 131 QGATPLVVV------------EGSRVLGVIALKDIVKG 156 (156)
T ss_dssp TTCEEEEEE------------ETTEEEEEEEEEECCCC
T ss_pred CCCCEEEEE------------ECCEEEEEEEEecCCCC
Confidence 999999999 57789999999999996
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.54 E-value=1.6e-07 Score=99.01 Aligned_cols=129 Identities=25% Similarity=0.341 Sum_probs=97.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp~ 162 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL-----TVIAGDDSVE----------------RGKPH 162 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC-----SEEECTTTSS----------------SCTTS
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe-----eeEEeCCCCC----------------CCCCC
Confidence 57889999999999999999999999999999999999986422 2334333221 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEEecCCCCHHHHh-ccCccccCCChhHHHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI---GLAMGIQGTEVAKE-NSDIIILDDNFASVVKVVRWGR 788 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv---gIamg~~g~~~ak~-~adiil~~~~~~~i~~~i~~gR 788 (1023)
|+--..+.+.+.-..+.++++||+.||..|++.|++ ++++|.+..+..++ .||+++. ++..+..+++.|+
T Consensus 163 ~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l~~~~ 236 (237)
T 4ex6_A 163 PDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD--SFPAAVTAVLDGH 236 (237)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES--SHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC--CHHHHHHHHHccC
Confidence 444455566665556679999999999999999999 99998333344444 7999986 7899999888654
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.51 E-value=4.2e-07 Score=100.38 Aligned_cols=66 Identities=26% Similarity=0.344 Sum_probs=58.5
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCcccc-CCChhHHHHHHH
Q 042091 719 DKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIIL-DDNFASVVKVVR 785 (1023)
Q Consensus 719 ~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~-~~~~~~i~~~i~ 785 (1023)
+|...++.+.+. | ..++++||+.||.+|++.|++|++|| ++.+..++.||+++. +++-.++.++++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 788888877654 2 46899999999999999999999999 899999999999998 888889999886
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.51 E-value=4.8e-08 Score=99.94 Aligned_cols=119 Identities=24% Similarity=0.376 Sum_probs=91.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+... . .........+. -....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~---~~~~~~~~~~~----------------~~~~~ 137 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-A---NRAIFEDGKFQ----------------GIRLR 137 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-E---EEEEEETTEEE----------------EEECC
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-e---eeEEeeCCceE----------------CCcCC
Confidence 7899999999999999999999999999888888 88887531 0 00011111000 02456
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|..|...++.+ ..+.++++||+.||.+|++.|+++++|+ ++.+ .||+++. ++..+..+++
T Consensus 138 ~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 138 FRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp SSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEES--SHHHHHHHHH
T ss_pred ccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEc--cHHHHHHHHH
Confidence 67899998888 5567899999999999999999999999 6665 8999986 5677776664
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.49 E-value=1.2e-07 Score=101.09 Aligned_cols=139 Identities=12% Similarity=0.131 Sum_probs=93.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee-chh------h--hcc----------
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE-GKV------F--RAL---------- 697 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~-g~~------~--~~l---------- 697 (1023)
.+.+.+.++|++|+++| +++++||+....+..+.+++ . .....+++.+.. |+. + ..+
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~--~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 98 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-I--NMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRS 98 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-C--EEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-h--heEEECCEEEeeCCeeeecccccccchhhHHHHHHHHH
Confidence 56788999999999999 99999999999998887665 2 111112222221 111 0 000
Q ss_pred ---------------------------CHHHH---HHHH---hhceEec-----cCCH--hhHHHHHHHHHhCCCEEEEE
Q 042091 698 ---------------------------SDKER---EKVA---QEITVMG-----RSSP--NDKLLLVQALRKGGDVVAVT 737 (1023)
Q Consensus 698 ---------------------------~~~~~---~~~~---~~~~v~a-----r~~P--~~K~~iV~~lq~~g~~V~~i 737 (1023)
.++.. .+.+ ..+.+.. ...| .+|...++.|.++-. |+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~ 177 (239)
T 1u02_A 99 WVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIA 177 (239)
T ss_dssp HHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEE
T ss_pred HHhhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEE
Confidence 01111 1111 1122211 1222 379999998887633 9999
Q ss_pred cCCccCHHHhhhC--CccEEecCCCCHHHHhccCccccC-CChhHHHHHHH
Q 042091 738 GDGTNDAPALHEA--DIGLAMGIQGTEVAKENSDIIILD-DNFASVVKVVR 785 (1023)
Q Consensus 738 GDG~ND~~aL~~A--dvgIamg~~g~~~ak~~adiil~~-~~~~~i~~~i~ 785 (1023)
||+.||.+||+.| ++||||| ++ ++.||+++.+ ++-.++.++++
T Consensus 178 GD~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 178 GDDATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp ESSHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred eCCCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHH
Confidence 9999999999999 9999999 76 6789999887 66778888775
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.46 E-value=5.1e-07 Score=97.87 Aligned_cols=66 Identities=35% Similarity=0.415 Sum_probs=58.1
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 719 DKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 719 ~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+|...++.+.++ .+.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++++
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 788888777664 356899999999999999999999999 888988999999999888889988875
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=5.1e-07 Score=97.26 Aligned_cols=64 Identities=22% Similarity=0.231 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHhC-C-----CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 718 NDKLLLVQALRKG-G-----DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 718 ~~K~~iV~~lq~~-g-----~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.+|...++.+.++ | ..++++||+.||.+|++.|++|++|+ ++.+ . .++++..+++-.++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888888765 3 67999999999999999999999999 8877 3 7889988888888888875
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.45 E-value=3.5e-07 Score=99.32 Aligned_cols=68 Identities=28% Similarity=0.295 Sum_probs=59.5
Q ss_pred HhhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
...|...++.+.++ | +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++++
T Consensus 189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 189 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 34788888887664 2 46999999999999999999999999 899999999999999888889998886
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.42 E-value=1e-06 Score=95.85 Aligned_cols=147 Identities=16% Similarity=0.073 Sum_probs=78.8
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCC-CCCCCCCCeee-ec--h-----hh--hccCHHHHHHH-
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILG-SDAEANDPNII-EG--K-----VF--RALSDKEREKV- 705 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~-~~~~~~~~~vi-~g--~-----~~--~~l~~~~~~~~- 705 (1023)
+-+.+.++|++|+++|++++++||+....+..+.+++|+.. +....+++.+. ++ + .+ ..++.+...++
T Consensus 27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 106 (275)
T 1xvi_A 27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVL 106 (275)
T ss_dssp SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHHH
Confidence 44668999999999999999999999999999999999864 22233333333 22 1 00 01221111111
Q ss_pred ------------------------------------------------------------Hhh--ceEec-----cCCH-
Q 042091 706 ------------------------------------------------------------AQE--ITVMG-----RSSP- 717 (1023)
Q Consensus 706 ------------------------------------------------------------~~~--~~v~a-----r~~P- 717 (1023)
+.+ +.+.. ...|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~leI~~~ 186 (275)
T 1xvi_A 107 NTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDA 186 (275)
T ss_dssp HHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHHTTEEEEECSSCEEEEET
T ss_pred HHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHhhCeEEEECCceEEEecC
Confidence 000 11100 0111
Q ss_pred -hhHHHHHHHHHhC-C----CE--EEEEcCCccCHHHhhhCCccEEecCCCC---HHHHhc--cC-ccccCCChhHHHHH
Q 042091 718 -NDKLLLVQALRKG-G----DV--VAVTGDGTNDAPALHEADIGLAMGIQGT---EVAKEN--SD-IIILDDNFASVVKV 783 (1023)
Q Consensus 718 -~~K~~iV~~lq~~-g----~~--V~~iGDG~ND~~aL~~AdvgIamg~~g~---~~ak~~--ad-iil~~~~~~~i~~~ 783 (1023)
.+|...++.+.+. | +. ++++||+.||.+|++.|++||+|+ ++. +..++. || +++.+++-+++.++
T Consensus 187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~ 265 (275)
T 1xvi_A 187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREG 265 (275)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC----------------------------
T ss_pred CCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHH
Confidence 2566666555432 2 34 999999999999999999999999 886 455543 78 88888888888888
Q ss_pred HH
Q 042091 784 VR 785 (1023)
Q Consensus 784 i~ 785 (1023)
++
T Consensus 266 l~ 267 (275)
T 1xvi_A 266 LD 267 (275)
T ss_dssp --
T ss_pred HH
Confidence 75
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=2e-07 Score=96.14 Aligned_cols=129 Identities=15% Similarity=0.126 Sum_probs=95.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ...++.++.. .....
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---~~~i~~~~~~-----------------~~kp~ 129 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFA---EADVLGRDEA-----------------PPKPH 129 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSC---GGGEECTTTS-----------------CCTTS
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcC---cceEEeCCCC-----------------CCCCC
Confidence 567899999999999999999999999999999999999864210 0112222110 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEEecCCCCHHHHhccCccccCCChhHHHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI-GLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGR 788 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv-gIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR 788 (1023)
|+--..+.+.+.-..+.++++||+.||..|.+.|++ +|+|+ ++.+..++.||+++. ++..+...++..|
T Consensus 130 ~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~--~~~el~~~~~~~~ 199 (205)
T 3m9l_A 130 PGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHAR--DCAQLRDLLSAEG 199 (205)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECS--SHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeC--CHHHHHHHHHhcc
Confidence 333334444443334679999999999999999999 99999 777777888999996 7888888887544
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.40 E-value=2e-06 Score=94.15 Aligned_cols=66 Identities=29% Similarity=0.362 Sum_probs=56.9
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 719 DKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 719 ~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+|...++.+.+. .+.++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++-+++.++++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHH
Confidence 566666666553 246899999999999999999999999 899999999999999888899998886
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.40 E-value=1.6e-06 Score=89.43 Aligned_cols=129 Identities=15% Similarity=0.094 Sum_probs=95.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|+++ +++.++|+.....+..+.+.+|+..... ..++.+.+.. ....-...
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~----~~~~~~~~~~-------------~~~~~~p~ 130 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLC----HKLEIDDSDR-------------VVGYQLRQ 130 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEE----EEEEECTTSC-------------EEEEECCS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceec----ceeEEcCCce-------------EEeeecCC
Confidence 6799999999999999 9999999999999999999999874210 0122211110 00001257
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+.|...++.+......++|+||+.||.+|.+.|+++++++ . .+..++.++.++.-+++..+..+++
T Consensus 131 p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-A-PENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-C-CHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred CchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC-C-cHHHHHHHhhhccccchHHHHHHHH
Confidence 89999999999988889999999999999999999999985 4 4444444444432347888887764
|
| >4aqr_D Calcium-transporting ATPase 8, plasma membrane-TY; Ca-binding protein-hydrolase complex, plasma-membrane calciu; 1.95A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.40 E-value=5.7e-08 Score=74.76 Aligned_cols=48 Identities=58% Similarity=0.968 Sum_probs=44.0
Q ss_pred CChhhhhhHHHhhhhhhccccccccccchhhHHHHHHHHhhhhhhhcC
Q 042091 45 VPVASLKRWRQASLVLNASRRFRYTLDLKKEEEKEKRRRMIRAHAQVI 92 (1023)
Q Consensus 45 ~~~~~~~~w~~~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 92 (1023)
+|.++++|||+++.++|+.|||+|++|+.++++..+.+++++.+.+++
T Consensus 1 ~s~e~L~rWR~a~lVlNa~RRFR~t~dL~K~~e~~~~~rkiR~~~~v~ 48 (57)
T 4aqr_D 1 SSIERLQQWRKAALVLNASRRFRYTLDLKKEQETREMRQKIRSHAHAL 48 (57)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhchHhhhhhhcchhhHHHHHHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999999887754
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.36 E-value=9.9e-07 Score=91.15 Aligned_cols=131 Identities=15% Similarity=0.089 Sum_probs=91.1
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCH
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSP 717 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P 717 (1023)
++|++.+.++.|+++|+++.++|+.....+..+.+.+|+...... ....+........ -......+|
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------------~~~~~~~~~ 149 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIF-AVETIWNSDGSFK------------ELDNSNGAC 149 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEE-EEEEEECTTSBEE------------EEECTTSTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEE-EeeeeecCCCcee------------ccCCCCCCc
Confidence 789999999999999999999999999999999999999531100 0001111110000 001234566
Q ss_pred hhHHHHHHHH-HhCCCEEEEEcCCccCHHHhhh----CCccEEecCCCCHHHHhccCccccCCChhHHHHHH
Q 042091 718 NDKLLLVQAL-RKGGDVVAVTGDGTNDAPALHE----ADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 718 ~~K~~iV~~l-q~~g~~V~~iGDG~ND~~aL~~----AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i 784 (1023)
..|.+.+..+ .-..+.++|+||+.||.+|++. +.++++++ ++.+..+..||+++. ++..+..++
T Consensus 150 ~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~--~~~el~~~l 218 (219)
T 3kd3_A 150 DSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVAR--NVAELASLI 218 (219)
T ss_dssp TCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEES--SHHHHHHHH
T ss_pred ccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeC--CHHHHHHhh
Confidence 7777777655 4457889999999999999976 34555555 566778889999986 666666543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.35 E-value=7.4e-07 Score=95.48 Aligned_cols=134 Identities=16% Similarity=0.083 Sum_probs=89.5
Q ss_pred ccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeec---------------hhhh--ccCHHHH
Q 042091 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEG---------------KVFR--ALSDKER 702 (1023)
Q Consensus 640 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g---------------~~~~--~l~~~~~ 702 (1023)
+.+.++|++|+++|++++++||+....+..+.+++|+.......+++.+... +.+. .++.+..
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~ 99 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKI 99 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCCC------CCCCCCEEECSCCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcccccccccccCceEEEecCCCHHHH
Confidence 4499999999999999999999999999999999998643222333333321 1100 0111110
Q ss_pred HH-------------------------------------------------------HHh--hceEe-----ccCC-Hhh
Q 042091 703 EK-------------------------------------------------------VAQ--EITVM-----GRSS-PND 719 (1023)
Q Consensus 703 ~~-------------------------------------------------------~~~--~~~v~-----ar~~-P~~ 719 (1023)
.+ .+. .+.+. .... -.+
T Consensus 100 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~ei~~g~s 179 (249)
T 2zos_A 100 REELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVHGNSD 179 (249)
T ss_dssp HHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEECSSSCHHHHHHHTTCEEEECSSSEEEECSCC
T ss_pred HHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEecCCHHHHHHHHhCCEEEEecCCeEEEeCCCC
Confidence 00 000 01110 0011 246
Q ss_pred HHHHHHHHHhC-----CCEEEEEcCCccCHHHhhhCCccEEecCCCC-HHHHhccCccccC
Q 042091 720 KLLLVQALRKG-----GDVVAVTGDGTNDAPALHEADIGLAMGIQGT-EVAKENSDIIILD 774 (1023)
Q Consensus 720 K~~iV~~lq~~-----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~-~~ak~~adiil~~ 774 (1023)
|...++.+.+. .+.|+++||+.||.+||+.|++|+||| ++. +..++.||+++.+
T Consensus 180 Kg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 180 KGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp HHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHHH
T ss_pred hHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEecc
Confidence 88888777654 357999999999999999999999999 777 6677889988753
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.28 E-value=1.2e-06 Score=91.42 Aligned_cols=126 Identities=13% Similarity=0.120 Sum_probs=93.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp~ 144 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF-----DAIVGSSLDG----------------KLSTK 144 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC-----SEEEEECTTS----------------SSCSH
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe-----eeeeccCCCC----------------CCCCC
Confidence 57899999999999999999999999999999999999986421 2333333221 01122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEEecCCCCHH--HHhccCccccCCChhHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI---GLAMGIQGTEV--AKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv---gIamg~~g~~~--ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
|+--..+.+.+.-..+.++++||+.||..|.+.|++ ++++| ++... .+..||+++. ++..+..++..
T Consensus 145 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~--s~~el~~~~~~ 216 (226)
T 3mc1_A 145 EDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYG-FGSYEELKNAGANYIVN--SVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSS-SSCHHHHHHHTCSEEES--SHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccC-CCCHHHHHHcCCCEEEC--CHHHHHHHHHH
Confidence 333344444444444579999999999999999999 88888 54443 3688999996 78888888764
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.23 E-value=1.4e-06 Score=93.97 Aligned_cols=66 Identities=27% Similarity=0.341 Sum_probs=56.0
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 719 DKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 719 ~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.|...++.+.++ .+.++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+.+-+++..+++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHH
Confidence 666666666543 356899999999999999999999999 888888999999998877778888875
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.2e-06 Score=91.55 Aligned_cols=128 Identities=16% Similarity=0.095 Sum_probs=92.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp~ 149 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK-----INIVTRDDVS----------------YGKPD 149 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS-----SCEECGGGSS----------------CCTTS
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh-----heeeccccCC----------------CCCCC
Confidence 56789999999999999999999999999999999999987532 2333333321 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEEecCCCCHHHHhc-cCccccCCChhHHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI---GLAMGIQGTEVAKEN-SDIIILDDNFASVVKVVRWG 787 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv---gIamg~~g~~~ak~~-adiil~~~~~~~i~~~i~~g 787 (1023)
|+--..+.+.+.-..+.++++||+.||..|.+.|++ ++++|.+..+..++. ||+++. ++..+..+++..
T Consensus 150 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~~l~~~ 222 (233)
T 3s6j_A 150 PDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLNHLDEI 222 (233)
T ss_dssp THHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHHTGGGT
T ss_pred hHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHHHHHHH
Confidence 333333444443334669999999999999999999 777774445555554 999986 788888887643
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=2.4e-06 Score=91.20 Aligned_cols=144 Identities=13% Similarity=0.169 Sum_probs=96.8
Q ss_pred ccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCC--CCCCCCCeeeechh--------h---------------
Q 042091 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGS--DAEANDPNIIEGKV--------F--------------- 694 (1023)
Q Consensus 640 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~vi~g~~--------~--------------- 694 (1023)
+...+++++++ +|+++++.||+....+..+.+++|+... ....+++.+..... +
T Consensus 22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (244)
T 1s2o_A 22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG 100 (244)
T ss_dssp HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCCcChHHHHHHhccccHHHHHHHHHh
Confidence 45667777755 6899999999999999999999887531 11223333322100 0
Q ss_pred ----------h----c----cC-------HHHHHHHHh----hceEe-c-----cCCH--hhHHHHHHHHHhC-C---CE
Q 042091 695 ----------R----A----LS-------DKEREKVAQ----EITVM-G-----RSSP--NDKLLLVQALRKG-G---DV 733 (1023)
Q Consensus 695 ----------~----~----l~-------~~~~~~~~~----~~~v~-a-----r~~P--~~K~~iV~~lq~~-g---~~ 733 (1023)
. . .. .+++.+.+. .+.+. + ...| .+|...++.+.++ | +.
T Consensus 101 ~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~ 180 (244)
T 1s2o_A 101 FEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQ 180 (244)
T ss_dssp CTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGG
T ss_pred ccCccccCcccCCCeEEEEEeChhhHHHHHHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHhCCCHHH
Confidence 0 0 00 011222222 12221 1 1122 2788888877764 2 46
Q ss_pred EEEEcCCccCHHHhhhCCccEEecCCCCHHHHhc-------cCccccCCChhHHHHHHH
Q 042091 734 VAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEN-------SDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 734 V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~-------adiil~~~~~~~i~~~i~ 785 (1023)
++++||+.||.+|++.|++|++|| ++.+..++. ||+++.+++-.++.++++
T Consensus 181 ~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 181 TLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp EEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred EEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 899999999999999999999999 899888885 889998888889988886
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.19 E-value=5.9e-06 Score=86.77 Aligned_cols=104 Identities=21% Similarity=0.129 Sum_probs=75.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCC--CCCeeeechhhhccCHHHHHHHHhhceEecc
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEA--NDPNIIEGKVFRALSDKEREKVAQEITVMGR 714 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~--~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar 714 (1023)
+++|++.+.++.|+++|+++.++||.....+..+++.+|+..-.... ......+|+.. -..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~-----------------~~~ 154 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIE-----------------GTP 154 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEE-----------------SSC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeeeec-----------------CCC
Confidence 57999999999999999999999999999999999999986210000 00001111100 012
Q ss_pred CCHhhHHHHHHHHHh-CC------CEEEEEcCCccCHHHhhhCCccEEec
Q 042091 715 SSPNDKLLLVQALRK-GG------DVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~-~g------~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
+.+..|.+.++.+.+ .| +.++++||+.||.+|++.|++++++.
T Consensus 155 ~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 155 SFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp SSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred CcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 335677777755543 35 68999999999999999999999985
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.18 E-value=1.5e-06 Score=90.09 Aligned_cols=123 Identities=11% Similarity=0.094 Sum_probs=85.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|++ ..+..+.+.+|+.... ..++.++... .....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp~ 147 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF-----DAIADPAEVA----------------ASKPA 147 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC-----SEECCTTTSS----------------SCTTS
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc-----ceEeccccCC----------------CCCCC
Confidence 46789999999999999999999998 4556777788875321 1233332211 01122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i 784 (1023)
|+--..+.+.+.-..+.++++||+.||..|++.|+++++|+ ++.+..+ .||+++.+.+-..+..++
T Consensus 148 ~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 148 PDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHHHHH
T ss_pred hHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHHHHH
Confidence 33334444444434567999999999999999999999999 7777666 899998765444444444
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.18 E-value=3.3e-06 Score=87.58 Aligned_cols=115 Identities=17% Similarity=0.210 Sum_probs=84.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.+++.+.++.+++.|+++.++|+.....+..+.+.+|+.... ..++.+.... .....
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~----------------~~kp~ 152 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF-----DALASAEKLP----------------YSKPH 152 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEECTTSS----------------CCTTS
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC-----cEEEeccccC----------------CCCCC
Confidence 46789999999999999999999999999888898998886421 1233322210 01122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe----cCCCCHHHHhccCcccc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM----GIQGTEVAKENSDIIIL 773 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIam----g~~g~~~ak~~adiil~ 773 (1023)
|+--..+.+.+.-..+.++++||+.||.+|++.|+++++| + ++.+..+..||+++.
T Consensus 153 ~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~ 212 (226)
T 1te2_A 153 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLS 212 (226)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECS
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEEC
Confidence 4444555555554456799999999999999999999999 5 444456788999986
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.16 E-value=4.7e-06 Score=87.32 Aligned_cols=124 Identities=13% Similarity=0.139 Sum_probs=81.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+.... ..++.++... .....
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f-----~~i~~~~~~~----------------~~Kp~ 148 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF-----HAIVDPTTLA----------------KGKPD 148 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC-----SEECCC-------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc-----CEEeeHhhCC----------------CCCCC
Confidence 4789999999999999999999999754 77788889986432 2333332211 01122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+-=..+.+.+.-..+.++|+||+.||..|.+.|+++++|. ++.+..+ .||+++.+.+-..+..+++
T Consensus 149 ~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~~el~~~~~~~ 215 (233)
T 3nas_A 149 PDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQTSDLTLELLHE 215 (233)
T ss_dssp CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSGGGCCHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCChHhCCHHHHHH
Confidence 33334555555555567999999999999999999999998 6666555 8999997654444444443
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.15 E-value=3.2e-06 Score=90.79 Aligned_cols=127 Identities=20% Similarity=0.236 Sum_probs=89.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.+++.+.++.|++.|+++.++|++....+..+.+.+|+..... ..++.++... .....
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~----------------~~kp~ 162 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP----DFLVTPDDVP----------------AGRPY 162 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC----SCCBCGGGSS----------------CCTTS
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh----HheecCCccC----------------CCCCC
Confidence 467899999999999999999999999998888888887653210 1223332211 11234
Q ss_pred HhhHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCC---ccEEecCCC------------------------CHHHHhc-
Q 042091 717 PNDKLLLVQALRKGG-DVVAVTGDGTNDAPALHEAD---IGLAMGIQG------------------------TEVAKEN- 767 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g-~~V~~iGDG~ND~~aL~~Ad---vgIamg~~g------------------------~~~ak~~- 767 (1023)
|+--..+.+.+.-.. +.++++||+.||..|++.|+ +++++| ++ .+..++.
T Consensus 163 ~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (267)
T 1swv_A 163 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIEVVRNRFVENG 241 (267)
T ss_dssp SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhhhHHHHHHhcC
Confidence 444455556665445 67999999999999999999 677777 44 2333444
Q ss_pred cCccccCCChhHHHHHHHH
Q 042091 768 SDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 768 adiil~~~~~~~i~~~i~~ 786 (1023)
||+++. ++..+..++..
T Consensus 242 ad~v~~--~~~el~~~l~~ 258 (267)
T 1swv_A 242 AHFTIE--TMQELESVMEH 258 (267)
T ss_dssp CSEEES--SGGGHHHHHHH
T ss_pred Cceecc--CHHHHHHHHHH
Confidence 999985 67777777743
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.10 E-value=2.9e-06 Score=87.98 Aligned_cols=123 Identities=16% Similarity=0.152 Sum_probs=82.3
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCH
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSP 717 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P 717 (1023)
+.+++.+.++.+++.|+++.++|+..........+.+|+.... ..++.++... .....|
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~----------------~~k~~~ 148 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF-----DIIIGGEDVT----------------HHKPDP 148 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC-----SEEECGGGCS----------------SCTTST
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe-----eeeeehhhcC----------------CCCCCh
Confidence 4689999999999999999999999999999888888876421 2333332210 011122
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe----cCCCCHHHHhc-cCccccCCChhHHHHHH
Q 042091 718 NDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM----GIQGTEVAKEN-SDIIILDDNFASVVKVV 784 (1023)
Q Consensus 718 ~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIam----g~~g~~~ak~~-adiil~~~~~~~i~~~i 784 (1023)
.--..+.+.+.-..+.++++||+.||.+|++.|+++++| + ++.+..+.. ||+++. ++..+...+
T Consensus 149 ~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~--~~~el~~~l 217 (225)
T 3d6j_A 149 EGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIS--TLGQLISVP 217 (225)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEES--SGGGGC---
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEEC--CHHHHHHhh
Confidence 322334444433345689999999999999999999887 4 333444444 899886 455555555
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.10 E-value=3.5e-06 Score=88.22 Aligned_cols=126 Identities=13% Similarity=0.134 Sum_probs=95.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp~ 157 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF-----DHVLSVDAVR----------------LYKTA 157 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC-----SEEEEGGGTT----------------CCTTS
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc-----CEEEEecccC----------------CCCcC
Confidence 57789999999999999999999999999999999999986432 2344443321 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe----cCCCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM----GIQGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIam----g~~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
|+--..+.+.+.-..+.++++||+.||..|.+.|+++++| + ++.+..+..+|+++. ++..+..++..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~--~~~el~~~l~~ 228 (233)
T 3umb_A 158 PAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGH--DMRDLLQFVQA 228 (233)
T ss_dssp HHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEES--SHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEEC--CHHHHHHHHHH
Confidence 4444455555554456799999999999999999999999 5 555555677999986 78888888764
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.08 E-value=3.2e-06 Score=92.43 Aligned_cols=67 Identities=18% Similarity=0.227 Sum_probs=57.3
Q ss_pred hhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 718 NDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 718 ~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
..|...++.+.++ .+.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++++
T Consensus 210 ~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 210 TGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLITDSEYSKGITNTLK 280 (289)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBCSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEcCCCCcCHHHHHHH
Confidence 3577777666553 346899999999999999999999999 899999999999999888888888886
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.07 E-value=5e-06 Score=86.76 Aligned_cols=125 Identities=14% Similarity=0.115 Sum_probs=91.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp~ 154 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF-----DHLISVDEVR----------------LFKPH 154 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC-----SEEEEGGGTT----------------CCTTC
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc-----ceeEehhhcc----------------cCCCC
Confidence 57899999999999999999999999999999999999986422 2334433321 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecC---CCCHHHHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGI---QGTEVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~---~g~~~ak~~adiil~~~~~~~i~~~i 784 (1023)
|+--..+.+.+.-..+.++++||+.||..|.+.|+++++|-. ++.+..+..+|+++. ++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (230)
T 3um9_A 155 QKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred hHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHH
Confidence 444444555555445679999999999999999999999931 444445678899887 677776654
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.07 E-value=1.6e-05 Score=83.18 Aligned_cols=124 Identities=19% Similarity=0.193 Sum_probs=93.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f-----~~~~~~~~~~----------------~~kp~ 157 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF-----DSITTSEEAG----------------FFKPH 157 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEEHHHHT----------------BCTTS
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc-----ceeEeccccC----------------CCCcC
Confidence 5679999999999999 999999999999999999999986421 2333333221 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCC---ccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEAD---IGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~Ad---vgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+--..+.+.+.-..+.++++||+. ||..|.+.|+ +++++| ++.+..++.+|+++. ++..+..+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~--~~~el~~~l~ 227 (234)
T 3u26_A 158 PRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEES--STHHHHHHHH
T ss_pred HHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeC--CHHHHHHHHH
Confidence 4334455555554456799999997 9999999999 688888 666767779999987 6888887775
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.05 E-value=3.5e-06 Score=88.16 Aligned_cols=130 Identities=18% Similarity=0.218 Sum_probs=87.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCC-CCCC----CCCeeeechhhhccCHHHHHHHHhhceE
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGS-DAEA----NDPNIIEGKVFRALSDKEREKVAQEITV 711 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~-~~~~----~~~~vi~g~~~~~l~~~~~~~~~~~~~v 711 (1023)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+... ..+. .....+.|.+..
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~---------------- 149 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDET---------------- 149 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTT----------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCC----------------
Confidence 6899999999999999999999999999999999999999631 0000 000001111100
Q ss_pred eccCCHhhHHHHHHHHHhC-C-CEEEEEcCCccCHHHhhhCCccEEecCCC-CHHHHhccCccccCCChhHHHHHH
Q 042091 712 MGRSSPNDKLLLVQALRKG-G-DVVAVTGDGTNDAPALHEADIGLAMGIQG-TEVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 712 ~ar~~P~~K~~iV~~lq~~-g-~~V~~iGDG~ND~~aL~~AdvgIamg~~g-~~~ak~~adiil~~~~~~~i~~~i 784 (1023)
...+.+..|..+++.+.++ | +.++|+||+.||..+.+.|+++|+++... .+.....+|+++. ++..+..++
T Consensus 150 ~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (225)
T 1nnl_A 150 QPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGEL 223 (225)
T ss_dssp SGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC--
T ss_pred CcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHHH
Confidence 0011234566666655443 4 56999999999999999999988887322 2344567898886 565554443
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.05 E-value=3.3e-06 Score=89.78 Aligned_cols=122 Identities=20% Similarity=0.271 Sum_probs=86.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~~~----------------~~Kp~ 172 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF-----SEMLGGQSLP----------------EIKPH 172 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-----SEEECTTTSS----------------SCTTS
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE-----EEEEecccCC----------------CCCcC
Confidence 67899999999999999999999999999999999999986421 2334333221 01123
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE-ecCC----CCHHHHhccCccccCCChhHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA-MGIQ----GTEVAKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa-mg~~----g~~~ak~~adiil~~~~~~~i~~ 782 (1023)
|+--..+.+.+.-..+.++++||+.||.+|.+.|+++.. +. . +.+..+..+|+++. ++..+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~ad~vi~--~~~el~~ 240 (243)
T 2hsz_A 173 PAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLT-YGYNYNIPIAQSKPDWIFD--DFADILK 240 (243)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-SSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred HHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEc-CCCCchhhhhhCCCCEEEC--CHHHHHH
Confidence 444445555555455679999999999999999998844 33 2 23445678899886 4555443
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.04 E-value=4.7e-06 Score=87.95 Aligned_cols=124 Identities=15% Similarity=0.122 Sum_probs=88.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp~ 168 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF-----KYIAGSNLDG----------------TRVNK 168 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC-----SEEEEECTTS----------------CCCCH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE-----EEEEeccccC----------------CCCCC
Confidence 57899999999999999999999999999999999999986422 1333332221 01122
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCc---cEEecCCCCHH--HHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKG-GDVVAVTGDGTNDAPALHEADI---GLAMGIQGTEV--AKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~-g~~V~~iGDG~ND~~aL~~Adv---gIamg~~g~~~--ak~~adiil~~~~~~~i~~~i 784 (1023)
|+--..+.+.+.-. .+.++++||+.||..|.+.|++ ++++| .+... .+..+|+++. ++..+.+++
T Consensus 169 ~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 169 NEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYG-YGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred HHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCC-CCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 33333444444444 5679999999999999999999 77777 44433 3578999987 566666554
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.03 E-value=1.1e-05 Score=84.25 Aligned_cols=125 Identities=10% Similarity=0.063 Sum_probs=86.1
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCC---HHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDN---LQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR 714 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~---~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar 714 (1023)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+.... ..++.+.+.. ...
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~k 158 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI-----DKTFFADEVL----------------SYK 158 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC-----SEEEEHHHHT----------------CCT
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh-----hhheeccccC----------------CCC
Confidence 47999999999999999999999999 88888888999886421 2333333221 011
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEEecC--CCCHHHHhccCccccCCChhHHHHHHH
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIGLAMGI--QGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~AdvgIamg~--~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
..|+--..+.+.+.-..+.++++||+. ||..|.+.|+++++|-. +..+..+..+|+++. ++..+..+++
T Consensus 159 p~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 230 (235)
T 2om6_A 159 PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIP--SIANLKDVIE 230 (235)
T ss_dssp TCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEES--SGGGHHHHHH
T ss_pred CCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHh--hHHHHHHHHH
Confidence 223332333343333346799999999 99999999999999931 333333455788775 6777776664
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.03 E-value=5.6e-06 Score=84.35 Aligned_cols=119 Identities=16% Similarity=0.226 Sum_probs=84.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
.+.|++.+.++.|++.|+++.++|++...... ..+.+|+.... ..++.+.... .....
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f-----~~~~~~~~~~----------------~~Kp~ 142 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF-----TEILTSQSGF----------------VRKPS 142 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE-----EEEECGGGCC----------------CCTTS
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe-----eeEEecCcCC----------------CCCCC
Confidence 46899999999999999999999999988888 88888875321 1222222110 01122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecCCCCHHHHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMGIQGTEVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg~~g~~~ak~~adiil~~~~~~~i~~~i 784 (1023)
|+--..+.+.+.-..+.++++||+.||.+|++.|+++ ++|+ ++. . .||+++. ++..+.+++
T Consensus 143 ~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 143 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECS--STTHHHHHT
T ss_pred cHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeC--CHHHHHHHH
Confidence 3343455555554556799999999999999999997 8887 665 2 6898886 566666554
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.00 E-value=4.7e-06 Score=85.55 Aligned_cols=121 Identities=12% Similarity=0.133 Sum_probs=88.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp~ 147 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF-----DIVLSGEEFK----------------ESKPN 147 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEEGGGCS----------------SCTTS
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe-----eeEeeccccc----------------CCCCC
Confidence 47899999999999999999999999999999999999986422 2344443321 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCC-CHHHHhccCccccCCChhHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQG-TEVAKENSDIIILDDNFASV 780 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g-~~~ak~~adiil~~~~~~~i 780 (1023)
|+--..+.+.+.-..+.++++||+.||..|.+.|+++.++..++ ....+..+|+++. ++..+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el 210 (214)
T 3e58_A 148 PEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDV 210 (214)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGG
T ss_pred hHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHH
Confidence 44445555555555567999999999999999999988886333 3334477888886 44444
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.3e-05 Score=83.90 Aligned_cols=122 Identities=14% Similarity=0.128 Sum_probs=86.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f-----~~i~~~~~~~----------------~~Kp~ 161 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF-----DSIIGSGDTG----------------TIKPS 161 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC-----SEEEEETSSS----------------CCTTS
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe-----eeEEcccccC----------------CCCCC
Confidence 57899999999999999999999999999999999999986421 2333333211 11223
Q ss_pred HhhHHHHHHHHHhCCC-EEEEEcCCccCHHHhhhCCc-cEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGD-VVAVTGDGTNDAPALHEADI-GLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~-~V~~iGDG~ND~~aL~~Adv-gIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+--..+.+.+.-..+ .++++||+.||..|.+.|++ +|.++ ++.+ ..+|+++. ++..+..++.
T Consensus 162 ~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~--~~~el~~~l~ 226 (231)
T 3kzx_A 162 PEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFK--NFYDIRNFIC 226 (231)
T ss_dssp SHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEES--SHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeC--CHHHHHHHHH
Confidence 3444555555554555 79999999999999999997 77776 5544 35677775 6888877764
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.97 E-value=8e-06 Score=85.41 Aligned_cols=126 Identities=17% Similarity=0.149 Sum_probs=90.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. .....
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f-----~~i~~~~~~~----------------~~Kp~ 141 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF-----DLIVGGDTFG----------------EKKPS 141 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-----SEEECTTSSC----------------TTCCT
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh-----eEEEecCcCC----------------CCCCC
Confidence 57899999999999999999999999999999999999986321 1333333210 12234
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecC-CCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMGI-QGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg~-~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
|+--..+++.+.-..+.++++||+.||..|.+.|++. |++.. .+.... ..+|+++. ++..+..++..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l~~ 210 (222)
T 2nyv_A 142 PTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLMDN 210 (222)
T ss_dssp THHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHHHT
T ss_pred hHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHHHH
Confidence 5555556666655556799999999999999999988 55541 222212 56888876 67888777653
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.92 E-value=2.2e-05 Score=84.45 Aligned_cols=127 Identities=17% Similarity=0.144 Sum_probs=90.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...++.++... .....
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~----------------~~kp~ 170 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT----PASTVFATDVV----------------RGRPF 170 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC----CSEEECGGGSS----------------SCTTS
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC----CceEecHHhcC----------------CCCCC
Confidence 57789999999999999999999999999999999988876421 12334333321 11223
Q ss_pred HhhHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCC---ccEEecCC-----------------------CCHHH-Hhcc
Q 042091 717 PNDKLLLVQALRKGG-DVVAVTGDGTNDAPALHEAD---IGLAMGIQ-----------------------GTEVA-KENS 768 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g-~~V~~iGDG~ND~~aL~~Ad---vgIamg~~-----------------------g~~~a-k~~a 768 (1023)
|+--..+.+.+.-.. +.++|+||+.||..|.+.|+ |+|++|.+ +.+.. ...+
T Consensus 171 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 250 (277)
T 3iru_A 171 PDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGA 250 (277)
T ss_dssp SHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCC
Confidence 334445555555556 78999999999999999999 56777622 11223 3459
Q ss_pred CccccCCChhHHHHHHH
Q 042091 769 DIIILDDNFASVVKVVR 785 (1023)
Q Consensus 769 diil~~~~~~~i~~~i~ 785 (1023)
|+++. ++..+..+++
T Consensus 251 d~v~~--~~~el~~~l~ 265 (277)
T 3iru_A 251 HYVID--SVADLETVIT 265 (277)
T ss_dssp SEEES--SGGGTHHHHH
T ss_pred CEEec--CHHHHHHHHH
Confidence 99986 6777777775
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.92 E-value=5.9e-06 Score=93.87 Aligned_cols=118 Identities=16% Similarity=0.165 Sum_probs=75.7
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhc-eEec
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEI-TVMG 713 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~-~v~a 713 (1023)
...++|++++.|+.|+++|++|+++||.....++.+|+++|+.-.... ..|+ |..+..-.+..+ ..+. ....
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~---~~Vi-g~~l~~~~dG~~---tg~~~~~~p 291 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKE---EKVL-GLRLMKDDEGKI---LPKFDKDFP 291 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCG---GGEE-EECEEECTTCCE---EEEECTTSC
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCc---ceEE-EeEEEEecCCce---eeeecCccc
Confidence 345799999999999999999999999999999999999987421100 0011 111100000000 0000 0001
Q ss_pred cCCHhhHHHHHHHHHhC--C-CEEEEEcCCccCHHHhhh-CCccEEecCC
Q 042091 714 RSSPNDKLLLVQALRKG--G-DVVAVTGDGTNDAPALHE-ADIGLAMGIQ 759 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~--g-~~V~~iGDG~ND~~aL~~-AdvgIamg~~ 759 (1023)
-+..+.|...++.+-+. | ..++++|||.||.+||++ +|.++++.++
T Consensus 292 ~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liin 341 (385)
T 4gxt_A 292 ISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIH 341 (385)
T ss_dssp CCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEEEC
T ss_pred eeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEEEc
Confidence 14567899999876432 2 347888999999999996 6777666544
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.90 E-value=1.2e-05 Score=84.23 Aligned_cols=125 Identities=14% Similarity=0.114 Sum_probs=89.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp~ 153 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF-----DHLLSVDPVQ----------------VYKPD 153 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEESGGGT----------------CCTTS
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh-----heEEEecccC----------------CCCCC
Confidence 57899999999999999999999999999999999999986421 2334333321 12334
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecC---CCCHHHHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGI---QGTEVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~---~g~~~ak~~adiil~~~~~~~i~~~i 784 (1023)
|+--..+.+.+.-..+.++++||+.||..|.+.|+++.++-. +..+..+..+|+++. ++..+..++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 222 (232)
T 1zrn_A 154 NRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 444455556555445668999999999999999999998832 222333456888875 566666555
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=1.9e-05 Score=83.22 Aligned_cols=124 Identities=8% Similarity=0.070 Sum_probs=87.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp~ 163 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL-----DSCLSADDLK----------------IYKPD 163 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEEGGGTT----------------CCTTS
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc-----CEEEEccccC----------------CCCCC
Confidence 57899999999999999999999999999999999999986421 2344443321 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc---EEecCCCCHHHHhcc-CccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG---LAMGIQGTEVAKENS-DIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg---Iamg~~g~~~ak~~a-diil~~~~~~~i~~~i 784 (1023)
|+--..+.+.+.-..+.++++||+.||..|.+.|++. +..| .+.+..+..+ |+++. ++..+..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 164 PRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeC--CHHHHHHHH
Confidence 4444455555554456689999999999999999955 4444 2222234456 88875 677776665
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.88 E-value=1.6e-05 Score=83.13 Aligned_cols=121 Identities=17% Similarity=0.099 Sum_probs=81.0
Q ss_pred CCcccHHHHHHHHHhC-CCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDA-GVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~a-Gi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
++.|++.+.++.|++. |+++.++|+.....+..+.+.+|+..... .++.+.+.. .
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~-------------------~ 148 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP-----FGAFADDAL-------------------D 148 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS-----CEECTTTCS-------------------S
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcC-----cceecCCCc-------------------C
Confidence 4679999999999999 99999999999999999999999864321 223332210 0
Q ss_pred CHhhHHH----HHHHHH--hCCCEEEEEcCCccCHHHhhhCC---ccEEecCCCCHHHHh--ccCccccCCChhHHHHHH
Q 042091 716 SPNDKLL----LVQALR--KGGDVVAVTGDGTNDAPALHEAD---IGLAMGIQGTEVAKE--NSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 716 ~P~~K~~----iV~~lq--~~g~~V~~iGDG~ND~~aL~~Ad---vgIamg~~g~~~ak~--~adiil~~~~~~~i~~~i 784 (1023)
.|.-+.. +.+.+. -..+.++++||+.||..|.+.|+ +++++| .+...... .+|+++. ++..+..++
T Consensus 149 ~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~--~~~el~~~l 225 (234)
T 2hcf_A 149 RNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFK--NFAETDEVL 225 (234)
T ss_dssp GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEES--CSCCHHHHH
T ss_pred ccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeC--CHHhHHHHH
Confidence 1112222 233333 22356899999999999999999 556555 33333332 3898886 445555554
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=9.4e-06 Score=88.15 Aligned_cols=128 Identities=11% Similarity=0.019 Sum_probs=88.2
Q ss_pred CCcccHHHHHHHHHhCCC--EEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc
Q 042091 637 PCRPGVKDAVKLCRDAGV--KVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR 714 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi--~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar 714 (1023)
++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+.... ..++.+...... ...+.
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f-----d~v~~~~~~~~~------------~~~~K 204 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF-----DGLTYCDYSRTD------------TLVCK 204 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC-----SEEECCCCSSCS------------SCCCT
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc-----ceEEEeccCCCc------------ccCCC
Confidence 678999999999999999 99999999999999999999997432 123322211000 01122
Q ss_pred CCHhhHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCccEEecCCCCHHH------HhccCccccCCChhHHHHHH
Q 042091 715 SSPNDKLLLVQALRKGG-DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVA------KENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g-~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~a------k~~adiil~~~~~~~i~~~i 784 (1023)
..|+-=..+.+.+.-.. +.++++||+.||..|.+.|++|.+|+ .+.+.. ...||+++. ++..+..++
T Consensus 205 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~ad~vi~--sl~el~~~l 278 (282)
T 3nuq_A 205 PHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIH-LVENEVNEILGQTPEGAIVIS--DILELPHVV 278 (282)
T ss_dssp TSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEE-ECSCCC----CCCCTTCEEES--SGGGGGGTS
T ss_pred cCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEE-EcCCccccccccCCCCCEEeC--CHHHHHHHh
Confidence 23333344444444445 77999999999999999999999998 333322 337788886 566655544
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.88 E-value=2.1e-05 Score=83.16 Aligned_cols=126 Identities=15% Similarity=0.181 Sum_probs=85.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+....+. |+..... ...++.++... .....
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~---~d~i~~~~~~~----------------~~kp~ 168 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFH---KELMVTAFDVK----------------YGKPN 168 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCC---GGGEECTTTCS----------------SCTTS
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcC---cceEEeHHhCC----------------CCCCC
Confidence 5789999999999999999999999988877777777 7764210 01233333321 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecCCCCHH----HHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMGIQGTEV----AKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg~~g~~~----ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+--..+.+.+.-..+.++++||+.||..|.+.|+++ +.+. ++... .+..+|+++. ++..+..+++
T Consensus 169 ~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--s~~el~~~l~ 239 (243)
T 3qxg_A 169 PEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFP--SMQTLCDSWD 239 (243)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEES--CHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 3333444444444456799999999999999999984 4444 44332 2346999986 7888877765
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.87 E-value=9.6e-05 Score=77.93 Aligned_cols=125 Identities=16% Similarity=0.163 Sum_probs=87.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp~ 152 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF-----EHVIISDFEG----------------VKKPH 152 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC-----SEEEEGGGGT----------------CCTTC
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc-----cEEEEeCCCC----------------CCCCC
Confidence 47799999999999999999999999999999999999986421 2344333221 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEEe---cCCCCHHHHh---ccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIGLAM---GIQGTEVAKE---NSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~AdvgIam---g~~g~~~ak~---~adiil~~~~~~~i~~~i~ 785 (1023)
|+-=..+.+.+.-..+.++++||+. ||..|.+.|+++.+. | .+...... .+|+++. ++..+..++.
T Consensus 153 ~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 225 (241)
T 2hoq_A 153 PKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEID--NLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEES--STTHHHHHHH
T ss_pred HHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEEC--CHHHHHHHHH
Confidence 3333344444444456799999998 999999999997654 3 33333332 6898876 6777777664
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.86 E-value=2.2e-05 Score=82.95 Aligned_cols=137 Identities=13% Similarity=0.109 Sum_probs=90.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHH--HHhhceEecc
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREK--VAQEITVMGR 714 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~--~~~~~~v~ar 714 (1023)
+++|++.+.++.|+++|+++.++|+.....+..+.+ |+... ..++.++....- ..+.. --+....+-+
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~------~~v~~~~~~~~~--~~~~~~~~kp~p~~~~~ 146 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK------DRIYCNHASFDN--DYIHIDWPHSCKGTCSN 146 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG------GGEEEEEEECSS--SBCEEECTTCCCTTCCS
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC------CeEEeeeeEEcC--CceEEecCCCCcccccc
Confidence 689999999999999999999999999988888887 76432 123332221000 00000 0000000111
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhc--cCccccCCChhHHHHHHHH
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEN--SDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~--adiil~~~~~~~i~~~i~~ 786 (1023)
....+|..+++.+....+.++|+||+.||.++.+.|++.++.. ...+..++. +|+++. ++..+..++..
T Consensus 147 ~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~~l~~ 217 (236)
T 2fea_A 147 QCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRKEIEN 217 (236)
T ss_dssp CCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHHHHHH
Confidence 1245788999988877889999999999999999999988643 212223333 777775 78888887754
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.85 E-value=3.4e-05 Score=81.30 Aligned_cols=127 Identities=14% Similarity=0.139 Sum_probs=84.5
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+..... ...++.++... ....
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~---~~~~~~~~~~~----------------~~kp 166 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQ---ANLMVTAFDVK----------------YGKP 166 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCC---GGGEECGGGCS----------------SCTT
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcC---CCeEEecccCC----------------CCCC
Confidence 36789999999999999999999999988877777777 8764210 01234333321 1223
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecCCCCHH----HHhccCccccCCChhHHHHHHH
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMGIQGTEV----AKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg~~g~~~----ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.|+--..+.+.+.-..+.++++||+.||..|.+.|++. +.+. .|... .+..||+++. ++..+..+++
T Consensus 167 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 238 (247)
T 3dv9_A 167 NPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFH--SMPDFNKNWE 238 (247)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEES--SHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 34444455555554556799999999999999999965 3333 33322 2247999987 6778777765
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.83 E-value=2.7e-05 Score=78.37 Aligned_cols=121 Identities=16% Similarity=0.132 Sum_probs=82.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCH---------------HHHHHHHHHcC--CCCCCCCCCCCeeee-----chhh
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNL---------------QTAKAIALECG--ILGSDAEANDPNIIE-----GKVF 694 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~g--i~~~~~~~~~~~vi~-----g~~~ 694 (1023)
++.|++.++++.|+++|+++.++|+... ..+..+.+.+| +.. ++. ++..
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~---------~~~~~~~~~~~~ 97 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDA---------IFMCPHGPDDGC 97 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCE---------EEEECCCTTSCC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeE---------EEEcCCCCCCCC
Confidence 5789999999999999999999999986 55666777777 331 110 0100
Q ss_pred hccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEEecCCCCHHHH----hc
Q 042091 695 RALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI---GLAMGIQGTEVAK----EN 767 (1023)
Q Consensus 695 ~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv---gIamg~~g~~~ak----~~ 767 (1023)
-...-.|+-=..+.+.+.-..+.++|+||+.||..|.+.|++ +++.| .+..... ..
T Consensus 98 ----------------~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~ 160 (179)
T 3l8h_A 98 ----------------ACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPE 160 (179)
T ss_dssp ----------------SSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCT
T ss_pred ----------------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCC
Confidence 011122333334445554445679999999999999999995 67666 4444333 45
Q ss_pred cCccccCCChhHHHHHHH
Q 042091 768 SDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 768 adiil~~~~~~~i~~~i~ 785 (1023)
+|+++. ++..+..++.
T Consensus 161 ~d~v~~--~l~el~~~l~ 176 (179)
T 3l8h_A 161 GTRVCE--DLAAVAEQLL 176 (179)
T ss_dssp TEEEES--SHHHHHHHHH
T ss_pred CcEEec--CHHHHHHHHH
Confidence 799887 6777777764
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.76 E-value=2.4e-05 Score=83.53 Aligned_cols=128 Identities=13% Similarity=0.094 Sum_probs=88.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..++.++... ......
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~i~~~~~~~---------------~~~Kp~ 170 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAG----EHIYDPSWVG---------------GRGKPH 170 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHC----SCEECGGGGT---------------TCCTTS
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhcc----ceEEeHhhcC---------------cCCCCC
Confidence 567899999999999999999999999999999999999853110 1133332221 011222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecCCC-------C-HHHHhccCccccCCChhHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMGIQG-------T-EVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg~~g-------~-~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
|+--..+.+.+.-..+.++++||+.||..|.+.|+++ +.+. .| . +..+..+|+++. ++..+..+++.
T Consensus 171 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~--~l~el~~~l~~ 246 (259)
T 4eek_A 171 PDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLT--SHAELRAALAE 246 (259)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEEC--SHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhC--CHHHHHHHHHh
Confidence 3333344444443446799999999999999999998 4443 33 2 234456899987 78888888864
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.76 E-value=6.6e-05 Score=78.53 Aligned_cols=124 Identities=11% Similarity=0.062 Sum_probs=87.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+.... ..++.++... .....
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp~ 164 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF-----KKIILSEDLG----------------VLKPR 164 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC-----SEEEEGGGTT----------------CCTTS
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc-----eeEEEeccCC----------------CCCCC
Confidence 56789999999999 99999999999999999999999986422 2334333321 11122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEEecCCCCH-HHHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIGLAMGIQGTE-VAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~AdvgIamg~~g~~-~ak~~adiil~~~~~~~i~~~i 784 (1023)
|+--..+.+.+.-..+.++++||+. ||..|.+.|+++++|...+.. ..+..+|+++. ++..+..+.
T Consensus 165 ~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~--sl~e~~~~~ 232 (240)
T 3qnm_A 165 PEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIH--SLKELMNLL 232 (240)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEES--STHHHHHHT
T ss_pred HHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEEC--CHHHHHHHH
Confidence 3333333343333346799999995 999999999999999844332 45667899987 566666554
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.74 E-value=6.4e-05 Score=76.84 Aligned_cols=122 Identities=11% Similarity=0.118 Sum_probs=86.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+ ++.|+++ +++.++|+.....+..+.+.+|+.... ..++.+.+.. .....
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp~ 130 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF-----KGIFSAESVK----------------EYKPS 130 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEEGGGGT----------------CCTTC
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC-----cEEEehhhcC----------------CCCCC
Confidence 56799999 9999999 999999999999999999999986421 2344443321 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecC---CCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGI---QGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~---~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+--..+.+.+. .+.++++||+.||..|.+.|+++.++-. ++.+..+..+|+++. ++..+..++.
T Consensus 131 ~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 198 (201)
T 2w43_A 131 PKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWIL 198 (201)
T ss_dssp HHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 444455556555 4678999999999999999999987721 222323456888876 6777766653
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=8.5e-05 Score=77.10 Aligned_cols=136 Identities=15% Similarity=0.129 Sum_probs=84.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCC---------------HHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHH
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDN---------------LQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKE 701 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~---------------~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~ 701 (1023)
++.|++.++++.|+++|+++.++|+.. ...+..+.+++|+... ..+..+........+
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~------~~~~~~~~~~~~~~~- 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD------GIYYCPHHPQGSVEE- 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS------EEEEECCBTTCSSGG-
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceE------EEEECCcCCCCcccc-
Confidence 688999999999999999999999999 4677788888888511 111111100000000
Q ss_pred HHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc----EEecCCCCHHHHhccCccccCCCh
Q 042091 702 REKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG----LAMGIQGTEVAKENSDIIILDDNF 777 (1023)
Q Consensus 702 ~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg----Iamg~~g~~~ak~~adiil~~~~~ 777 (1023)
...........|+--..+.+.+.-..+.++||||+.||..+.+.|++. +..|....+.....+|+++. ++
T Consensus 123 ----~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~--~l 196 (211)
T 2gmw_A 123 ----FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SL 196 (211)
T ss_dssp ----GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CG
T ss_pred ----cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC--CH
Confidence 000000122334444444555544456689999999999999999954 43342223334456898886 67
Q ss_pred hHHHHHHH
Q 042091 778 ASVVKVVR 785 (1023)
Q Consensus 778 ~~i~~~i~ 785 (1023)
..+..++.
T Consensus 197 ~el~~~l~ 204 (211)
T 2gmw_A 197 ADLPQAIK 204 (211)
T ss_dssp GGHHHHHH
T ss_pred HHHHHHHH
Confidence 77776654
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.68 E-value=7e-05 Score=79.09 Aligned_cols=123 Identities=18% Similarity=0.168 Sum_probs=84.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|+++|+++.++|+.....+..+-+.+|+. .. ..++.++... .....
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f-----~~~~~~~~~~----------------~~Kp~ 167 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SF-----DFALGEKSGI----------------RRKPA 167 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TC-----SEEEEECTTS----------------CCTTS
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ce-----eEEEecCCCC----------------CCCCC
Confidence 36689999999999999999999999988888888999875 21 2344443321 11122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc---EEecCCCC-HHH-HhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG---LAMGIQGT-EVA-KENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg---Iamg~~g~-~~a-k~~adiil~~~~~~~i~~~i 784 (1023)
|+-=..+.+.+.-..+.++|+||+.||..|.+.|++. +++| .+. +.. +..+|+++. ++..+...+
T Consensus 168 p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~-~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 168 PDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWG-FRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSS-SSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCC-CCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 3222334444443456799999999999999999994 5555 333 333 346898886 577666554
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.68 E-value=7.8e-05 Score=79.40 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=88.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+.... ..++.++... .....
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~~~----------------~~Kp~ 149 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF-----DAVISVDAKR----------------VFKPH 149 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEEGGGGT----------------CCTTS
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc-----cEEEEccccC----------------CCCCC
Confidence 67899999999999 9999999999999999999999986421 2334333321 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCC---------------------------CHHHHhccC
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQG---------------------------TEVAKENSD 769 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g---------------------------~~~ak~~ad 769 (1023)
|+--..+.+.+.-..+.++++||+.||..|.+.|+++.++. +. .+..+..+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 228 (253)
T 1qq5_A 150 PDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARV-ARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPD 228 (253)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEE-CCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCS
T ss_pred HHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEE-CCcccchhhhhcccccccccccccccccccCCCCCCCC
Confidence 44444555555444466899999999999999999999887 44 122345688
Q ss_pred ccccCCChhHHHHHHH
Q 042091 770 IIILDDNFASVVKVVR 785 (1023)
Q Consensus 770 iil~~~~~~~i~~~i~ 785 (1023)
+++. ++..+..++.
T Consensus 229 ~~~~--~~~el~~~l~ 242 (253)
T 1qq5_A 229 FVVP--ALGDLPRLVR 242 (253)
T ss_dssp EEES--SGGGHHHHHH
T ss_pred eeeC--CHHHHHHHHH
Confidence 8885 6777777664
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.67 E-value=9.6e-06 Score=83.54 Aligned_cols=120 Identities=9% Similarity=0.113 Sum_probs=81.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.... ..++.+.... ...-.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~KP~ 140 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM-----AVTISADDTP----------------KRKPD 140 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE-----EEEECGGGSS----------------CCTTS
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc-----cEEEecCcCC----------------CCCCC
Confidence 5789999999999999 999999999999999999888875321 1222222210 01112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecC--C-CCHHHHhccCccccCCChhHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGI--Q-GTEVAKENSDIIILDDNFASVV 781 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~--~-g~~~ak~~adiil~~~~~~~i~ 781 (1023)
|+--..+.+.+.-..+.++++||+.||..|.+.|++++++.. . ..+..++ +|+++. ++..+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~ 205 (209)
T 2hdo_A 141 PLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDIL 205 (209)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGG
T ss_pred cHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHH
Confidence 333344445444445679999999999999999999999742 2 2333444 898886 444443
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.67 E-value=6.9e-05 Score=79.35 Aligned_cols=123 Identities=13% Similarity=0.110 Sum_probs=88.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++. +++.++|+........+.+.+|+.. ..++.++... .....
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f-------~~~~~~~~~~----------------~~kp~ 175 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW-------DMLLCADLFG----------------HYKPD 175 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC-------SEECCHHHHT----------------CCTTS
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc-------ceEEeecccc----------------cCCCC
Confidence 4678999999999986 9999999999999999999999851 2333332211 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecC----CCC---HH--HHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGI----QGT---EV--AKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~----~g~---~~--ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+--..+.+.+.-..+.++++||+.||..|.+.|+++++|.. .|. +. .+..+|+++. ++..+..++.
T Consensus 176 ~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l~el~~~l~ 251 (254)
T 3umc_A 176 PQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CHHHHHHHhc
Confidence 444444455554445679999999999999999999999983 122 11 2667899987 7888877764
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00011 Score=76.68 Aligned_cols=125 Identities=10% Similarity=0.058 Sum_probs=86.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++. +++.++|+.....+....+.+|+.... ..++.++... .....
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp~ 160 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF-----KDIFVSEDTG----------------FQKPM 160 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC-----SEEEEGGGTT----------------SCTTC
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh-----heEEEecccC----------------CCCCC
Confidence 5788999999999999 999999999999999999999986421 2333333221 11122
Q ss_pred HhhHHHHHHHHH-hCCCEEEEEcCCc-cCHHHhhhCCccEEecCCC--CHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALR-KGGDVVAVTGDGT-NDAPALHEADIGLAMGIQG--TEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq-~~g~~V~~iGDG~-ND~~aL~~AdvgIamg~~g--~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+--..+.+.+. -..+.++++||+. ||..|.+.|+++..+...+ .+..+..+|+++. ++..+..+++
T Consensus 161 ~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~~l~ 231 (238)
T 3ed5_A 161 KEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYHILN 231 (238)
T ss_dssp HHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHHHHT
T ss_pred hHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHHHHH
Confidence 322233333333 2235799999998 9999999999954332143 4456678899987 6778877764
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.63 E-value=9.5e-05 Score=74.52 Aligned_cols=107 Identities=17% Similarity=0.105 Sum_probs=71.9
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCH
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSP 717 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P 717 (1023)
+.|++.+.++.|++.|+++.++|+... .+..+.+.+|+.... ..++.+.... .....|
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f-----~~~~~~~~~~----------------~~kp~~ 140 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF-----TEVVTSSSGF----------------KRKPNP 140 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE-----EEEECGGGCC----------------CCTTSC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe-----eeeeeccccC----------------CCCCCH
Confidence 679999999999999999999998864 567778888875321 1222222210 011223
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccC
Q 042091 718 NDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSD 769 (1023)
Q Consensus 718 ~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~ad 769 (1023)
+--..+.+.+.-. .++++||+.||..|++.|++++++. +.....++..+
T Consensus 141 ~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 141 ESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred HHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 3333333333322 6899999999999999999998887 55555555443
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.62 E-value=9.2e-05 Score=76.94 Aligned_cols=123 Identities=15% Similarity=0.160 Sum_probs=83.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec--c
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG--R 714 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a--r 714 (1023)
++.+++.+.++.++. ++.++|+........+.+++|+..... ..++.++... .. .
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~----~~~~~~~~~~----------------~~~~k 143 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFA----PHIYSAKDLG----------------ADRVK 143 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTT----TCEEEHHHHC----------------TTCCT
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhcc----ceEEeccccc----------------cCCCC
Confidence 467788898888875 899999999999999999998864210 1233333210 01 1
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecCCCCH-------HHHhc-cCccccCCChhHHHHHHH
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMGIQGTE-------VAKEN-SDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg~~g~~-------~ak~~-adiil~~~~~~~i~~~i~ 785 (1023)
..|+--..+.+.+.-..+.++++||+.||..|++.|+++ ++++ ++.. ..++. ||+++. ++..+..+++
T Consensus 144 pk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 220 (229)
T 2fdr_A 144 PKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQDLPAVIA 220 (229)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHHH
T ss_pred cCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeec--CHHHHHHHHH
Confidence 233333444555544456799999999999999999998 7776 5543 25565 999986 5666666653
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.62 E-value=2.3e-05 Score=83.16 Aligned_cols=120 Identities=13% Similarity=0.173 Sum_probs=77.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH-cCCCCCCCCCCCCeeeech--hhhccCHHHHHHHHhhceEec
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE-CGILGSDAEANDPNIIEGK--VFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-~gi~~~~~~~~~~~vi~g~--~~~~l~~~~~~~~~~~~~v~a 713 (1023)
++.|++.+.++.|++.|+++.++|+.....+...-.+ .|+.... ..++.++ ... ..
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f-----~~~~~~~~~~~~----------------~~ 170 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLF-----SHIVLGDDPEVQ----------------HG 170 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTS-----SCEECTTCTTCC----------------SC
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhe-----eeEEecchhhcc----------------CC
Confidence 5789999999999999999999999987665543322 3443211 1222222 110 01
Q ss_pred cCCHhhHHHHHHHHHhCC--CEEEEEcCCccCHHHhhhCC---ccEEecCCCCHHHHhccCccccCCChhHH
Q 042091 714 RSSPNDKLLLVQALRKGG--DVVAVTGDGTNDAPALHEAD---IGLAMGIQGTEVAKENSDIIILDDNFASV 780 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~g--~~V~~iGDG~ND~~aL~~Ad---vgIamg~~g~~~ak~~adiil~~~~~~~i 780 (1023)
...|+-=..+.+.+.-.. +.++++||+.||..|.+.|+ +++++| ++.+..+..||+++. ++..+
T Consensus 171 Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~--sl~el 239 (250)
T 3l5k_A 171 KPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLN--SLQDF 239 (250)
T ss_dssp TTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECS--CGGGC
T ss_pred CCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeec--CHHHh
Confidence 112222222222222222 67999999999999999999 677777 666667889999986 45444
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.60 E-value=6e-05 Score=81.57 Aligned_cols=115 Identities=18% Similarity=0.094 Sum_probs=80.7
Q ss_pred CCcccHHHHHHHHHhC-CCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDA-GVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~a-Gi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.+.+++.+.++.|++. |+++.++|+.....+..+.+.+|+.. ...++.+++... ...
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~------f~~i~~~~~~~~----------------~kp 171 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR------PEYFITANDVKQ----------------GKP 171 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC------CSSEECGGGCSS----------------CTT
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc------cCEEEEcccCCC----------------CCC
Confidence 3578999999999999 99999999999999999999998852 123444443210 112
Q ss_pred CHhhHHHHHHHHHh-------CCCEEEEEcCCccCHHHhhhCCccEEe---cCCCCHHHH-hccCccccC
Q 042091 716 SPNDKLLLVQALRK-------GGDVVAVTGDGTNDAPALHEADIGLAM---GIQGTEVAK-ENSDIIILD 774 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~-------~g~~V~~iGDG~ND~~aL~~AdvgIam---g~~g~~~ak-~~adiil~~ 774 (1023)
.|+--..+.+.+.- ..+.++++||+.||..|++.|++++++ | .+.+..+ ..||+++.+
T Consensus 172 ~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~-~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 172 HPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATT-FDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp SSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSS-SCHHHHTTSSCSEEESS
T ss_pred ChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCC-CCHHHHhhCCCCEEECC
Confidence 33333444555544 445699999999999999999977665 4 3333333 358988763
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.59 E-value=5.5e-05 Score=78.60 Aligned_cols=117 Identities=14% Similarity=0.110 Sum_probs=80.5
Q ss_pred CCcccHHHHHHHHHhCC-CEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDAG-VKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aG-i~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
++.|++.+.++.|++.| +++.++|+........+.+.+|+..... . +++..
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~-----~-----------------------~~~~~ 156 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD-----H-----------------------IEVMS 156 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS-----E-----------------------EEEES
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh-----e-----------------------eeecC
Confidence 56889999999999999 9999999999988899999999864211 1 12222
Q ss_pred --CHhhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEEecC------CCCHHHHhc-cCccccCCChhHHHHH
Q 042091 716 --SPNDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIGLAMGI------QGTEVAKEN-SDIIILDDNFASVVKV 783 (1023)
Q Consensus 716 --~P~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~AdvgIamg~------~g~~~ak~~-adiil~~~~~~~i~~~ 783 (1023)
.|+-=..+.+.+.-..+.++++||+. ||..|.+.|+++.++-. .+....+.. +|+++. ++..+..+
T Consensus 157 kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~--~l~el~~~ 232 (234)
T 3ddh_A 157 DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVK--RLDDLLSL 232 (234)
T ss_dssp CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECS--SGGGHHHH
T ss_pred CCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecc--cHHHHHHh
Confidence 23333333344433346799999996 99999999999988721 222222333 488876 56666654
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.59 E-value=9.9e-05 Score=77.88 Aligned_cols=124 Identities=17% Similarity=0.175 Sum_probs=86.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++. +++.++|+........+.+.+|+.. ..++.++... .....
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f-------~~~~~~~~~~----------------~~kp~ 171 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW-------DVIIGSDINR----------------KYKPD 171 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC-------SCCCCHHHHT----------------CCTTS
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe-------eEEEEcCcCC----------------CCCCC
Confidence 5678999999999997 9999999999999999999999851 1223322211 01112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCC----CC---H-H-HHhccCccccCCChhHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQ----GT---E-V-AKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~----g~---~-~-ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
|+-=..+.+.+.-..+.++++||+.||..|.+.|+++++|... |. + . .+..+|+++. ++..+..++..
T Consensus 172 ~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~--~~~el~~~l~~ 248 (254)
T 3umg_A 172 PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISAT--DITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEES--SHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEEC--CHHHHHHHhcC
Confidence 2222222233322345799999999999999999999999831 11 1 1 3567899987 78888888754
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.58 E-value=8.3e-05 Score=79.82 Aligned_cols=125 Identities=12% Similarity=0.148 Sum_probs=90.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.++++.|++.|+++.++|+... ....+.+.+|+.... ..++.+.+.. .....
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f-----~~~~~~~~~~----------------~~Kp~ 163 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHF-----DFVLTSEAAG----------------WPKPD 163 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGC-----SCEEEHHHHS----------------SCTTS
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhh-----hEEEeecccC----------------CCCCC
Confidence 4679999999999999999999998766 468888889986422 2333333321 12344
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEEecCCCCHH-----HHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIGLAMGIQGTEV-----AKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~AdvgIamg~~g~~~-----ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+--..+.+.+.-..+.++|+||+. ||..|.+.|+++.++...+... ....+|+++. ++..+..++.
T Consensus 164 ~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l~ 236 (263)
T 3k1z_A 164 PRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHHH
Confidence 5555556666655556799999997 9999999999999998444221 2236899886 6777777774
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00012 Score=76.39 Aligned_cols=123 Identities=15% Similarity=0.171 Sum_probs=86.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.++++.|++ |+++.++|+..........+.++-. ...++.+.+.. .....
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~-------fd~i~~~~~~~----------------~~KP~ 154 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE-------FDHIITAQDVG----------------SYKPN 154 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC-------CSEEEEHHHHT----------------SCTTS
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc-------cCEEEEccccC----------------CCCCC
Confidence 678999999999999 8999999999988877776654421 23444444331 12344
Q ss_pred HhhHHHHHHHHHh---CCCEEEEEcCCc-cCHHHhhhCCccEEecCCC----------CHHHHhccCccccCCChhHHHH
Q 042091 717 PNDKLLLVQALRK---GGDVVAVTGDGT-NDAPALHEADIGLAMGIQG----------TEVAKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 717 P~~K~~iV~~lq~---~g~~V~~iGDG~-ND~~aL~~AdvgIamg~~g----------~~~ak~~adiil~~~~~~~i~~ 782 (1023)
|+-....++.+++ ..+.++++||+. ||..|.+.|+++++|...+ .+..+..+|+++. ++..+..
T Consensus 155 ~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~--~~~el~~ 232 (240)
T 3smv_A 155 PNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN--SMGEMAE 232 (240)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES--SHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC--CHHHHHH
Confidence 5544455443443 346799999996 9999999999999995221 1234578899986 6788777
Q ss_pred HHH
Q 042091 783 VVR 785 (1023)
Q Consensus 783 ~i~ 785 (1023)
+++
T Consensus 233 ~l~ 235 (240)
T 3smv_A 233 AHK 235 (240)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00037 Score=70.82 Aligned_cols=136 Identities=13% Similarity=0.075 Sum_probs=91.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCH---HHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNL---QTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~---~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a 713 (1023)
++.||+.++++.|+++|+++.++|+... ..+..+.+.+|+.... ..++...+.... .-..
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f-----d~i~~~~~~~~~------------~~~~ 96 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF-----DFIYASNSELQP------------GKME 96 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE-----EEEEECCTTSST------------TCCC
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe-----EEEEEccccccc------------cCCC
Confidence 6899999999999999999999998776 8889999999996421 122222211000 0012
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCC-ccCHHHhhhCCccEEecCCCCHH-----H-HhccCccccCCChhHHHHHHHH
Q 042091 714 RSSPNDKLLLVQALRKGGDVVAVTGDG-TNDAPALHEADIGLAMGIQGTEV-----A-KENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~g~~V~~iGDG-~ND~~aL~~AdvgIamg~~g~~~-----a-k~~adiil~~~~~~~i~~~i~~ 786 (1023)
.-.|+--..+++.+.-....++||||+ .+|..+-+.|++....-..+... . ...+|.++.+.++..+..+++.
T Consensus 97 KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l 176 (189)
T 3ib6_A 97 KPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLL 176 (189)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHH
T ss_pred CcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHH
Confidence 234444455555555455679999999 79999999999875442132211 1 1267888877788888888876
Q ss_pred HHH
Q 042091 787 GRS 789 (1023)
Q Consensus 787 gR~ 789 (1023)
.+.
T Consensus 177 ~~~ 179 (189)
T 3ib6_A 177 LKK 179 (189)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00097 Score=67.39 Aligned_cols=53 Identities=17% Similarity=0.187 Sum_probs=35.8
Q ss_pred EEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCC
Q 042091 560 VHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDP 637 (1023)
Q Consensus 560 ~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~ 637 (1023)
-+.-|+++.+-+..- .++ +.+.+.+.++..+|..++.+| .|..++|++++.|+
T Consensus 133 ~v~iGn~~~m~~~gi----------~i~---~~~~~~~~~~~~~G~T~V~va------------idg~l~g~iavaD~ 185 (185)
T 2kmv_A 133 KVLIGNREWMIRNGL----------VIN---NDVNDFMTEHERKGRTAVLVA------------VDDELCGLIAIADT 185 (185)
T ss_dssp EEEEECHHHHHHHTC----------CCC---HHHHHHHHHHHHTTCEEEEEE------------ETTEEEEEEEEECC
T ss_pred EEEECCHHHHHHcCC----------CCC---HHHHHHHHHHHhCCCeEEEEE------------ECCEEEEEEEEEcC
Confidence 345599887654211 112 234455667778898888888 56789999999995
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00013 Score=73.97 Aligned_cols=93 Identities=11% Similarity=0.014 Sum_probs=66.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCC-HHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDN-LQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~-~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
++.|++.++++.|+++|+++.++||.. ...+..+.+.+|+..... .+ .+.+..
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~-----~~---------------------~~~~~~ 121 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV-----HR---------------------EIYPGS 121 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE-----EE---------------------EESSSC
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc-----ee---------------------EEEeCc
Confidence 688999999999999999999999999 799999999999874211 00 011111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
.|+.-..+.+.+.-..+.++++||+.||..+.++|++...
T Consensus 122 k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 122 KITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred hHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 2222223333333334568999999999999999988643
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00015 Score=74.85 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=79.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++ |+++.++|+.....+..+-+.+|+.... ..++.++ ..
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f-----~~i~~~~----------------------~~ 135 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF-----DGIYGSS----------------------PE 135 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC-----SEEEEEC----------------------SS
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe-----eeeecCC----------------------CC
Confidence 467999999999999 9999999999988888888999987422 1222221 01
Q ss_pred HhhHHHHHHH-HHhC---CCEEEEEcCCccCHHHhhhCCc---cEEecCCC-CHHHH-hccCccccCCChhHHHH
Q 042091 717 PNDKLLLVQA-LRKG---GDVVAVTGDGTNDAPALHEADI---GLAMGIQG-TEVAK-ENSDIIILDDNFASVVK 782 (1023)
Q Consensus 717 P~~K~~iV~~-lq~~---g~~V~~iGDG~ND~~aL~~Adv---gIamg~~g-~~~ak-~~adiil~~~~~~~i~~ 782 (1023)
+.-|.++.+. +++. .+.++++||+.||+.|.++|++ ++++| .+ .+..+ ..+|+++. ++..+..
T Consensus 136 ~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~~a~~v~~--~~~el~~ 207 (210)
T 2ah5_A 136 APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG-FGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SSCHHHHHTTCCSEEES--STTHHHH
T ss_pred CCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 1122233322 3332 3569999999999999999999 77777 44 33333 36898886 4555544
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00037 Score=70.90 Aligned_cols=99 Identities=8% Similarity=0.005 Sum_probs=73.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.| ++.++|+........+.+.+|+.... ..++.+.... .....
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f-----~~~~~~~~~~----------------~~Kp~ 143 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL-----LAFFTSSALG----------------VMKPN 143 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC-----SCEEEHHHHS----------------CCTTC
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc-----ceEEeecccC----------------CCCCC
Confidence 47799999999999999 99999999999999999999986421 1233333221 12234
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
|+--..+++.+.-..+.++++||+.||..|.+.|++...+-
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 144 PAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 44444455555544567999999999999999999998775
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00045 Score=73.16 Aligned_cols=120 Identities=14% Similarity=0.122 Sum_probs=82.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+..... .++. .....
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~-----~i~~---------------------~~kp~ 164 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP-----RIEV---------------------VSEKD 164 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC-----CEEE---------------------ESCCS
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc-----eeee---------------------eCCCC
Confidence 56799999999999 999999999999988888888888864211 1111 11123
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEEecCCCCH--------HHHhccCc-cccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIGLAMGIQGTE--------VAKENSDI-IILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~AdvgIamg~~g~~--------~ak~~adi-il~~~~~~~i~~~i~ 785 (1023)
|+--..+.+.+.-..+.++++||+. ||..|.+.|++++++-..|.. .....+|+ ++. ++..+..+++
T Consensus 165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 241 (251)
T 2pke_A 165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--DPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--SGGGHHHHHH
T ss_pred HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--CHHHHHHHHH
Confidence 4433444555544456799999999 999999999999876423321 11345787 665 6777777664
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.001 Score=68.44 Aligned_cols=126 Identities=17% Similarity=0.256 Sum_probs=85.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.++++.|++.|+++.++|+.+...+..+-+.+|+.... ..++.+.+.. ...-.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f-----d~~~~~~~~~----------------~~KP~ 142 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF-----DVMVFGDQVK----------------NGKPD 142 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-----SEEECGGGSS----------------SCTTS
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc-----cccccccccC----------------CCccc
Confidence 46789999999999999999999999999999999999997532 2344433321 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc----EEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG----LAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg----Iamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+-=..+.+.+.-..+.++||||+.+|..+-++|++. +.-|.+..+..+++.+..+. +...+++.++
T Consensus 143 p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~--~~~eli~~l~ 213 (216)
T 3kbb_A 143 PEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV--KPEEILNVLK 213 (216)
T ss_dssp THHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE--CGGGHHHHHH
T ss_pred HHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC--CHHHHHHHHH
Confidence 4433444555554456799999999999999999974 33343344444555444444 2344555553
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00017 Score=74.12 Aligned_cols=99 Identities=6% Similarity=-0.045 Sum_probs=71.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH------cCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhce
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE------CGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEIT 710 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~------~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~ 710 (1023)
++.|++.+.++.|++ |+++.++|+.....+..+.+. .|+.... ..++.+....
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f-----~~~~~~~~~~--------------- 147 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF-----DKVYASCQMG--------------- 147 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS-----SEEEEHHHHT---------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc-----CeEEeecccC---------------
Confidence 467999999999999 999999999988888777776 5664321 2333333221
Q ss_pred EeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 711 VMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
.....|+--..+.+.+.-..+.++++||+.||..|.+.|+++.++.
T Consensus 148 -~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~ 193 (211)
T 2i6x_A 148 -KYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCP 193 (211)
T ss_dssp -CCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECC
T ss_pred -CCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEE
Confidence 1223344444555555444567999999999999999999999887
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00026 Score=75.33 Aligned_cols=37 Identities=22% Similarity=0.240 Sum_probs=32.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGI 676 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi 676 (1023)
.+.+...++|++|+++|+++++.||+.... +.+.++.
T Consensus 21 ~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~---~~~~l~~ 57 (246)
T 3f9r_A 21 CQTDEMRALIKRARGAGFCVGTVGGSDFAK---QVEQLGR 57 (246)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHCT
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHhhh
Confidence 577899999999999999999999999984 5677775
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00079 Score=72.18 Aligned_cols=44 Identities=16% Similarity=0.098 Sum_probs=36.5
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECC---CCHHHHHHHHHHcCCCC
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTG---DNLQTAKAIALECGILG 678 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTG---D~~~ta~~ia~~~gi~~ 678 (1023)
.+.+-|+++++|++++++|++++++|| ..........+++|+..
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 344567899999999999999999999 67777777778888853
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00023 Score=67.48 Aligned_cols=97 Identities=10% Similarity=0.017 Sum_probs=68.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+.... ..++.+.+.. .....
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~Kp~ 76 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV-----DKVLLSGELG----------------VEKPE 76 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS-----SEEEEHHHHS----------------CCTTS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc-----cEEEEeccCC----------------CCCCC
Confidence 57789999999999999999999999999888888888876421 2333332211 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
|+--..+.+.+.-..+.++|+||+.+|..+.+++++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~ 114 (137)
T 2pr7_A 77 EAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVG 114 (137)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 33333344444333456899999999999999998743
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0015 Score=67.71 Aligned_cols=119 Identities=13% Similarity=0.180 Sum_probs=79.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.++++.|++. +++.++|+.... -+.+|+... ...++.+.... .....
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~-----f~~~~~~~~~~----------------~~kp~ 157 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY-----FAFALCAEDLG----------------IGKPD 157 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG-----CSEEEEHHHHT----------------CCTTS
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH-----eeeeEEccccC----------------CCCcC
Confidence 4778999999999998 999999987654 244555421 12333332221 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEEec---CCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIGLAMG---IQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~AdvgIamg---~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+--..+.+.+.-..+.++++||+. ||..|.+.|+++.++- ....+. +..+|+++. ++..+..+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~~l~ 227 (230)
T 3vay_A 158 PAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHHHHH
Confidence 4444455555554456799999997 9999999999988872 122222 667898887 6787777764
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00019 Score=73.36 Aligned_cols=103 Identities=15% Similarity=0.094 Sum_probs=66.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH-cCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE-CGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
++.|++.+.++.|++.|+++.++|+........+... +|+... ...++.+.... ...-
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~-----f~~~~~~~~~~----------------~~Kp 149 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA-----ADHIYLSQDLG----------------MRKP 149 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH-----CSEEEEHHHHT----------------CCTT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh-----eeeEEEecccC----------------CCCC
Confidence 5689999999999999999999999765544333322 333210 01222222210 1122
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCC
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQG 760 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g 760 (1023)
.|+--..+.+.+.-..+.++++||+.||..|.+.|++...+...+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 194 (206)
T 2b0c_A 150 EARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDK 194 (206)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred CHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCC
Confidence 344445555655545567999999999999999999998876333
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0024 Score=68.22 Aligned_cols=124 Identities=13% Similarity=0.130 Sum_probs=85.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.++++.|++ |+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f-----~~i~~~~~~~----------------~~KP~ 178 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF-----DAIVIGGEQK----------------EEKPA 178 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC-----SEEEEGGGSS----------------SCTTC
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh-----heEEecCCCC----------------CCCCC
Confidence 578999999999998 5999999999999999999999986432 2334443321 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCC-ccCHHHhhhCCc--cEEecCCCCH---HHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDG-TNDAPALHEADI--GLAMGIQGTE---VAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG-~ND~~aL~~Adv--gIamg~~g~~---~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+--..+.+.+.-..+.++||||+ .||..+-+.|++ .|.++ .+.. .....+|+++. ++..+..++.
T Consensus 179 p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~-~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 250 (260)
T 2gfh_A 179 PSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWIN-KSGRVPLTSSPMPHYMVS--SVLELPALLQ 250 (260)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEEC-TTCCCCSSCCCCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEc-CCCCCcCcccCCCCEEEC--CHHHHHHHHH
Confidence 444444455554445679999995 999999999999 57776 3321 12345788876 5666666653
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0032 Score=67.34 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=35.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECC---CCHHHHHHHHHHcCCCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTG---DNLQTAKAIALECGILG 678 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTG---D~~~ta~~ia~~~gi~~ 678 (1023)
.+-++++++|++++++|++++++|| ..........+++|+..
T Consensus 22 ~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 22 EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 4457899999999999999999988 77777777788888854
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00057 Score=71.09 Aligned_cols=135 Identities=13% Similarity=0.017 Sum_probs=77.9
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCH---------------HHHHHHHHHcCCCCCCCCCCCCeeee--chhhhccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNL---------------QTAKAIALECGILGSDAEANDPNIIE--GKVFRALS 698 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~gi~~~~~~~~~~~vi~--g~~~~~l~ 698 (1023)
.++.|++.++++.|+++|+++.++|+... ..+..+.+++|+.-.. .... +.. ..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~------~~~~~~~~~-g~~~ 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDM------VLACAYHEA-GVGP 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSE------EEEECCCTT-CCST
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceee------EEEeecCCC-Ccee
Confidence 47889999999999999999999999887 6778888888874110 0000 000 0000
Q ss_pred HHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE-EecCCCCH---HHHhccCccccC
Q 042091 699 DKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL-AMGIQGTE---VAKENSDIIILD 774 (1023)
Q Consensus 699 ~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI-amg~~g~~---~ak~~adiil~~ 774 (1023)
+. ........-.|.-=..+.+.+.-..+.++||||+.||..+.+.|++.. .+-..|.. .....+|+++.
T Consensus 128 --~~----~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~- 200 (218)
T 2o2x_A 128 --LA----IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSS- 200 (218)
T ss_dssp --TC----CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHH-
T ss_pred --ec----ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecc-
Confidence 00 000000111222222233333333456899999999999999999764 32113321 11234666664
Q ss_pred CChhHHHHHHH
Q 042091 775 DNFASVVKVVR 785 (1023)
Q Consensus 775 ~~~~~i~~~i~ 785 (1023)
++..+..++.
T Consensus 201 -~l~el~~~l~ 210 (218)
T 2o2x_A 201 -ELGDLLAAIE 210 (218)
T ss_dssp -HHHHHHHHHH
T ss_pred -cHHHHHHHHH
Confidence 5666665553
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0013 Score=68.59 Aligned_cols=99 Identities=10% Similarity=-0.029 Sum_probs=70.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHH------HcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhce
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIAL------ECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEIT 710 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~------~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~ 710 (1023)
++.|++.++++.|++. +++.++|+.....+..+.+ ..|+... ...++.+.+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~-----fd~i~~~~~~~--------------- 170 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY-----FEKTYLSYEMK--------------- 170 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH-----CSEEEEHHHHT---------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh-----CCEEEeecccC---------------
Confidence 4679999999999999 9999999999988887764 3454321 11223322211
Q ss_pred EeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 711 VMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
.....|+-=..+.+.+.-..+.++++||+.||..|.+.|+++.++.
T Consensus 171 -~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v 216 (229)
T 4dcc_A 171 -MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTP 216 (229)
T ss_dssp -CCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECC
T ss_pred -CCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEE
Confidence 1233445445556666555567999999999999999999999887
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.00062 Score=73.11 Aligned_cols=57 Identities=18% Similarity=0.282 Sum_probs=48.6
Q ss_pred hhHHHHHHHHHhC--CCEEEEEcC----CccCHHHhhhCC-ccEEecCCCCHHHHhccCccccCCC
Q 042091 718 NDKLLLVQALRKG--GDVVAVTGD----GTNDAPALHEAD-IGLAMGIQGTEVAKENSDIIILDDN 776 (1023)
Q Consensus 718 ~~K~~iV~~lq~~--g~~V~~iGD----G~ND~~aL~~Ad-vgIamg~~g~~~ak~~adiil~~~~ 776 (1023)
.+|..-++.| .. .+.|+++|| |.||.+||+.|+ +|++|| ++.+..|+.||+++.+++
T Consensus 196 vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 196 WDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETA 259 (262)
T ss_dssp CSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC-
T ss_pred CCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCc
Confidence 4788888888 22 468999999 999999999999 599998 999999999999987554
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0051 Score=69.53 Aligned_cols=138 Identities=16% Similarity=0.156 Sum_probs=84.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+++|+++.++|+.....+..+-+.+|+...-. ...++++++...- .+..+...-...-.
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd---~~~Ivs~ddv~~~-----~~~~~~~kp~~KP~ 286 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFE---ADFIATASDVLEA-----ENMYPQARPLGKPN 286 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSC---GGGEECHHHHHHH-----HHHSTTSCCCCTTS
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcC---CCEEEeccccccc-----ccccccccCCCCCC
Confidence 688999999999999999999999999999999999999874210 0134554443100 00000000001122
Q ss_pred HhhHHHHHHHHH--------------hCCCEEEEEcCCccCHHHhhhCCccE-EecCCCC-------HHHHhccCccccC
Q 042091 717 PNDKLLLVQALR--------------KGGDVVAVTGDGTNDAPALHEADIGL-AMGIQGT-------EVAKENSDIIILD 774 (1023)
Q Consensus 717 P~~K~~iV~~lq--------------~~g~~V~~iGDG~ND~~aL~~AdvgI-amg~~g~-------~~ak~~adiil~~ 774 (1023)
|+-=....+.+. -....++||||+.+|..+-++|++.. .+. .|. +.....+|+++.
T Consensus 287 P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi~- 364 (384)
T 1qyi_A 287 PFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVIN- 364 (384)
T ss_dssp THHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEES-
T ss_pred HHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEEC-
Confidence 222112222211 12356899999999999999999763 333 321 122346898886
Q ss_pred CChhHHHHHHH
Q 042091 775 DNFASVVKVVR 785 (1023)
Q Consensus 775 ~~~~~i~~~i~ 785 (1023)
++..+..+++
T Consensus 365 -sl~eL~~~l~ 374 (384)
T 1qyi_A 365 -HLGELRGVLD 374 (384)
T ss_dssp -SGGGHHHHHS
T ss_pred -CHHHHHHHHH
Confidence 6777776653
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0065 Score=62.02 Aligned_cols=95 Identities=15% Similarity=0.175 Sum_probs=60.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.++++.|+++|+++.++||.....+..+.. .. ...++.+.+.. ...-.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~-------~d~v~~~~~~~----------------~~KP~ 89 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV-------NDWMIAAPRPT----------------AGWPQ 89 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT-------TTTCEECCCCS----------------SCTTS
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc-------CCEEEECCcCC----------------CCCCC
Confidence 678999999999999999999999998887755443 11 01223222210 11222
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCc-cEEec
Q 042091 717 PNDKLLLVQALRKG-GDVVAVTGDGTNDAPALHEADI-GLAMG 757 (1023)
Q Consensus 717 P~~K~~iV~~lq~~-g~~V~~iGDG~ND~~aL~~Adv-gIamg 757 (1023)
|+-=....+.+.-. .+.++||||..+|..+-+.|++ .|++.
T Consensus 90 p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 90 PDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp THHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred hHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 33223333333322 2568999999999999999997 34443
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0086 Score=63.37 Aligned_cols=117 Identities=12% Similarity=0.208 Sum_probs=80.1
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++.|++.+.++.|++.|+++.+.|+.. .+..+-+.+|+.... ..++.+++.. ...-
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F-----d~i~~~~~~~----------------~~KP 171 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF-----DFIADAGKCK----------------NNKP 171 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC-----SEECCGGGCC----------------SCTT
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc-----ceeecccccC----------------CCCC
Confidence 3578999999999999999998877653 456677889997532 2445554432 1233
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEEecCCCCHHHHhccCccccCCChhHH
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI-GLAMGIQGTEVAKENSDIIILDDNFASV 780 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv-gIamg~~g~~~ak~~adiil~~~~~~~i 780 (1023)
.|+-=..+++.+.-..+.++||||+.+|..+-++|++ .|+++ +..+ ...||+++. ++..+
T Consensus 172 ~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~--~~~ad~vi~--~l~eL 232 (250)
T 4gib_A 172 HPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVG-NYEN--LKKANLVVD--STNQL 232 (250)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES-CTTT--TTTSSEEES--SGGGC
T ss_pred cHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhH--hccCCEEEC--ChHhC
Confidence 4444455556665555679999999999999999998 45555 3332 245899886 44443
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0014 Score=69.45 Aligned_cols=53 Identities=17% Similarity=0.261 Sum_probs=42.9
Q ss_pred hhHHHHHHHH-HhCCCEEEEEcC----CccCHHHhhhCCc-cEEecCCCCHHHHhccCcc
Q 042091 718 NDKLLLVQAL-RKGGDVVAVTGD----GTNDAPALHEADI-GLAMGIQGTEVAKENSDII 771 (1023)
Q Consensus 718 ~~K~~iV~~l-q~~g~~V~~iGD----G~ND~~aL~~Adv-gIamg~~g~~~ak~~adii 771 (1023)
.+|..-++.| .-..+.|+++|| |.||.+||+.|+. |++|| ++.+..|+.||+|
T Consensus 187 ~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v 245 (246)
T 2amy_A 187 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF 245 (246)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred CchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence 3677777777 112468999999 9999999999988 99999 9999999999987
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.05 E-value=0.014 Score=62.40 Aligned_cols=42 Identities=10% Similarity=0.161 Sum_probs=37.1
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEC---CCCHHHHHHHHHHcCCCC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVT---GDNLQTAKAIALECGILG 678 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlT---GD~~~ta~~ia~~~gi~~ 678 (1023)
.++ |+++++|++++++|++++++| |..........+++|+..
T Consensus 21 ~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 21 SRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 356 899999999999999999999 888888888888899864
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.087 Score=55.55 Aligned_cols=41 Identities=20% Similarity=0.131 Sum_probs=36.2
Q ss_pred CcccHHHHHHHHHhCCCEEEEEC---CCCHHHHHHHHHHcCCCC
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVT---GDNLQTAKAIALECGILG 678 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlT---GD~~~ta~~ia~~~gi~~ 678 (1023)
+-++..++++.+++.|+++.++| |..........+++|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 55788999999999999999999 999998888888888753
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.0052 Score=65.22 Aligned_cols=85 Identities=18% Similarity=0.248 Sum_probs=64.7
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCH----HHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhce
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNL----QTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEIT 710 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~----~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~ 710 (1023)
+.++.|++.+.++.|+++|+++.++||... ..+..-.+++||..... . .
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~---~------------------------~ 151 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND---K------------------------T 151 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST---T------------------------T
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc---c------------------------e
Confidence 357899999999999999999999999865 47777778899974210 0 1
Q ss_pred EeccCCHhhHHHHHHHHHhCC-CEEEEEcCCccCHHH
Q 042091 711 VMGRSSPNDKLLLVQALRKGG-DVVAVTGDGTNDAPA 746 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~~g-~~V~~iGDG~ND~~a 746 (1023)
++-|....+|....+.+++.| .+|+++||..+|.++
T Consensus 152 Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 152 LLLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp EEEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred eEecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 233333467888888888754 568999999999986
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.01 Score=61.35 Aligned_cols=120 Identities=8% Similarity=-0.019 Sum_probs=71.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|+++|+++.++|+... .+..+.+.+|+.... ..++.+.+.. ...-.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f-----~~~~~~~~~~----------------~~Kp~ 152 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF-----DALALSYEIK----------------AVKPN 152 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC-----SEEC---------------------------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe-----eEEEeccccC----------------CCCCC
Confidence 5779999999999999999999999866 478888889986421 1233222210 01122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCcc-CHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTN-DAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~N-D~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+--..+.+.+.-. . +|+||+.+ |..+-+.|++....-..+... .+. +.++. ++..+..++.
T Consensus 153 ~~~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~-~~~-~~~i~--~l~el~~~l~ 215 (220)
T 2zg6_A 153 PKIFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPILLDRYDFY-PDV-RDRVK--NLREALQKIE 215 (220)
T ss_dssp CCHHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEEBCTTSCC-TTC-CSCBS--SHHHHHHHHH
T ss_pred HHHHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEEECCCCCC-CCc-ceEEC--CHHHHHHHHH
Confidence 22223333333322 2 99999999 999999999875542122111 111 44443 5666666553
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=95.71 E-value=0.062 Score=53.04 Aligned_cols=32 Identities=16% Similarity=0.313 Sum_probs=24.9
Q ss_pred HHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccC
Q 042091 593 FKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKD 636 (1023)
Q Consensus 593 ~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D 636 (1023)
+.+.+..+..+|..++.+| .|..++|++++.|
T Consensus 134 ~~~~~~~~~~~G~T~v~va------------~dg~~~g~i~l~D 165 (165)
T 2arf_A 134 VSDAMTDHEMKGQTAILVA------------IDGVLCGMIAIAD 165 (165)
T ss_dssp HHHHHHHHHTTTSEEEEEE------------ETTEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEE------------ECCEEEEEEEEEC
Confidence 4445566777888888888 5678999999987
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.49 E-value=0.0069 Score=64.37 Aligned_cols=85 Identities=18% Similarity=0.187 Sum_probs=63.6
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCH----HHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhce
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNL----QTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEIT 710 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~----~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~ 710 (1023)
++++.|++.+.++.|+++|+++.++||... ..+..-.+++||..... . .
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~---~------------------------~ 151 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE---S------------------------A 151 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG---G------------------------G
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc---c------------------------c
Confidence 457899999999999999999999999865 46677777899974110 0 1
Q ss_pred EeccCCHhhHHHHHHHHHhCC-CEEEEEcCCccCHHH
Q 042091 711 VMGRSSPNDKLLLVQALRKGG-DVVAVTGDGTNDAPA 746 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~~g-~~V~~iGDG~ND~~a 746 (1023)
++-|..-..|....+.+.+.| .+|+++||..+|.++
T Consensus 152 Lilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 152 FYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EEEESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred eeccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 222333356777778887774 468999999999985
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=95.48 E-value=0.042 Score=58.52 Aligned_cols=43 Identities=14% Similarity=0.099 Sum_probs=37.9
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEC---CCCHHHHHHHHHHcCCCC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVT---GDNLQTAKAIALECGILG 678 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlT---GD~~~ta~~ia~~~gi~~ 678 (1023)
+++-+++.++++.++++|++++++| |..........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5567889999999999999999999 888888888888888853
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.12 E-value=0.027 Score=61.31 Aligned_cols=97 Identities=15% Similarity=0.023 Sum_probs=68.8
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHH---HHHHHH--------cCCCCCCCCCCCCeeeechhhhccCHHHH
Q 042091 634 IKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTA---KAIALE--------CGILGSDAEANDPNIIEGKVFRALSDKER 702 (1023)
Q Consensus 634 ~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta---~~ia~~--------~gi~~~~~~~~~~~vi~g~~~~~l~~~~~ 702 (1023)
.++++.|++.++++.|+++|+++.++||.....+ ...-+. .|+.. ..++.+....
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~------- 250 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-------VMQCQREQGD------- 250 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-------SEEEECCTTC-------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCc-------hheeeccCCC-------
Confidence 3578899999999999999999999999985432 333334 67731 1233222211
Q ss_pred HHHHhhceEeccCCHhhHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCccE
Q 042091 703 EKVAQEITVMGRSSPNDKLLLVQALRKGG-DVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 703 ~~~~~~~~v~ar~~P~~K~~iV~~lq~~g-~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
.+-.|+-|..+.+.+.... +.++|+||..+|+.|-++|++-.
T Consensus 251 ----------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 251 ----------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp ----------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred ----------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 2345777888888775444 34689999999999999999853
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.03 E-value=0.018 Score=59.85 Aligned_cols=114 Identities=11% Similarity=0.145 Sum_probs=72.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|+++| ++.++|+.....+..+.+.+|+..... .+.....
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~--------------------------~~~~~~~-- 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVE--------------------------GRVLIYI-- 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTT--------------------------TCEEEES--
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcC--------------------------eeEEecC--
Confidence 68899999999999999 999999999999999999998853110 0000111
Q ss_pred HhhHHHHHHHHHh--CCCEEEEEcCCcc---CHHHhhhCCcc-EEecCCC----C-HHHHh--ccCccccCCChhHHHHH
Q 042091 717 PNDKLLLVQALRK--GGDVVAVTGDGTN---DAPALHEADIG-LAMGIQG----T-EVAKE--NSDIIILDDNFASVVKV 783 (1023)
Q Consensus 717 P~~K~~iV~~lq~--~g~~V~~iGDG~N---D~~aL~~Advg-Iamg~~g----~-~~ak~--~adiil~~~~~~~i~~~ 783 (1023)
.|..+++.+.+ ..+.++|+||+.| |..+-+.|++. |.+. .+ . +..++ .+|+++. ++..+..+
T Consensus 147 --~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~-~g~~~~~~~~l~~~~~~~~~i~--~~~el~~~ 221 (231)
T 2p11_A 147 --HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPR-QGHYAFDPKEISSHPPADVTVE--RIGDLVEM 221 (231)
T ss_dssp --SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEEC-CSSSSSCHHHHHHSCCCSEEES--SGGGGGGC
T ss_pred --ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeC-CCCCCCcchhccccCCCceeec--CHHHHHHH
Confidence 12223333332 3568999999999 55555667653 2233 22 2 22333 3888885 55555444
Q ss_pred H
Q 042091 784 V 784 (1023)
Q Consensus 784 i 784 (1023)
+
T Consensus 222 l 222 (231)
T 2p11_A 222 D 222 (231)
T ss_dssp G
T ss_pred H
Confidence 3
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.90 E-value=0.03 Score=58.23 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=31.2
Q ss_pred CCEEEEEcCC-ccCHHHhhhCCccEE---ecCCCC-HHHH---hccCcccc
Q 042091 731 GDVVAVTGDG-TNDAPALHEADIGLA---MGIQGT-EVAK---ENSDIIIL 773 (1023)
Q Consensus 731 g~~V~~iGDG-~ND~~aL~~AdvgIa---mg~~g~-~~ak---~~adiil~ 773 (1023)
.+.++++||+ .||..|++.|+++++ +| .+. +..+ ..+|+++.
T Consensus 193 ~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 193 SEETVIVGDNLRTDILAGFQAGLETILVLSG-VSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp GGGEEEEESCTTTHHHHHHHTTCEEEEESSS-SCCGGGGSSCSSCCSEEES
T ss_pred cceEEEECCCchhHHHHHHHcCCeEEEECCC-CCChhhhhhcCCCCCEEEC
Confidence 4679999999 799999999998854 45 333 3333 46888876
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.64 E-value=0.009 Score=59.75 Aligned_cols=96 Identities=17% Similarity=0.088 Sum_probs=61.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCC---------------CHHHHHHHHHHcCCCCCCCCCCCCeeeec----hhhhcc
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGD---------------NLQTAKAIALECGILGSDAEANDPNIIEG----KVFRAL 697 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD---------------~~~ta~~ia~~~gi~~~~~~~~~~~vi~g----~~~~~l 697 (1023)
++.|++.++++.|+++|+++.++|+- ....+..+.+.+|+... .+++.+ .+..
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd------~v~~s~~~~~~~~~-- 113 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFD------EVLICPHLPADECD-- 113 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEE------EEEEECCCGGGCCS--
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCee------EEEEcCCCCccccc--
Confidence 67899999999999999999999997 46677888888888510 111221 1110
Q ss_pred CHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 698 SDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 698 ~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
...-.|+-=..+.+.+.-..+.++||||+.+|..+-+.|++..
T Consensus 114 --------------~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~ 156 (176)
T 2fpr_A 114 --------------CRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGING 156 (176)
T ss_dssp --------------SSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred --------------ccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeE
Confidence 0011111111112223223456899999999999999999863
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=94.54 E-value=0.036 Score=61.19 Aligned_cols=128 Identities=12% Similarity=0.135 Sum_probs=75.5
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHc----CCCCCCCCCCCCeeeec-hhhhccCH-HHHHHH--
Q 042091 634 IKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALEC----GILGSDAEANDPNIIEG-KVFRALSD-KEREKV-- 705 (1023)
Q Consensus 634 ~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~----gi~~~~~~~~~~~vi~g-~~~~~l~~-~~~~~~-- 705 (1023)
....+.|+.++.++.|+++|++|+++||-....++.+|..+ ||.+...-.. ...++. ..-..... .+..+-
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~-~~~~~~~~~~~~~~~~~~~~dg~y 218 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGV-TTLLKNRKTGELTTARKQIAEGKY 218 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEE-CEEEECTTTCCEECHHHHHHTTCC
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEee-eeeeeccccccccccccccccccc
Confidence 34467899999999999999999999999999999999984 6654321000 000000 00000000 000000
Q ss_pred ----HhhceE-----eccCCHhhHHHHHHHHHhC-CCEEEEEcCC-ccCHHHhhh--CCccEEecCCCCH
Q 042091 706 ----AQEITV-----MGRSSPNDKLLLVQALRKG-GDVVAVTGDG-TNDAPALHE--ADIGLAMGIQGTE 762 (1023)
Q Consensus 706 ----~~~~~v-----~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG-~ND~~aL~~--AdvgIamg~~g~~ 762 (1023)
..+..+ .-.+.-+.|..-++..-.. ..-+++.||+ ..|.+||.. ++.|+.+-++-.+
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in~~~ 288 (327)
T 4as2_A 219 DPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKA 288 (327)
T ss_dssp CGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEEECCCH
T ss_pred cccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEEEecCC
Confidence 000001 1123346788877766543 3468999999 479999965 5566665544433
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.45 E-value=0.025 Score=60.35 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=34.5
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHH---HHHHHHHHcCCC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQ---TAKAIALECGIL 677 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~---ta~~ia~~~gi~ 677 (1023)
.++.|++.++++.|+++|+++.++||.... .+...-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 467899999999999999999999998843 444455677886
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.38 E-value=0.094 Score=55.84 Aligned_cols=96 Identities=19% Similarity=0.198 Sum_probs=67.2
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHc---CCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALEC---GILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~---gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
-++.|++.++++.|+++|+++.++|..+...+..+-+.+ |+.... ..++.+ +..
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f-----d~i~~~-~~~----------------- 185 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV-----DGHFDT-KIG----------------- 185 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC-----SEEECG-GGC-----------------
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc-----cEEEec-CCC-----------------
Confidence 368999999999999999999999999988877776644 464321 123333 210
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
..-.|+-=..+.+.+.-..+.++||||..+|+.+-++|++-.
T Consensus 186 ~KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~ 227 (261)
T 1yns_A 186 HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHV 227 (261)
T ss_dssp CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEE
T ss_pred CCCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 222333334445555444567999999999999999999753
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.16 E-value=0.11 Score=54.56 Aligned_cols=94 Identities=12% Similarity=0.090 Sum_probs=66.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|+++|+++.++|+... +..+-+.+|+.... ..++.+.+.. ...-.
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f-----d~i~~~~~~~----------------~~KP~ 151 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF-----TFCADASQLK----------------NSKPD 151 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC-----SEECCGGGCS----------------SCTTS
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc-----cccccccccc----------------CCCCc
Confidence 5789999999999999999999997653 45667788887532 2444444432 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
|+-=....+.+.-..+.++||||+.+|+.+-++|++-
T Consensus 152 p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~ 188 (243)
T 4g9b_A 152 PEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMR 188 (243)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCE
Confidence 3333444455554556799999999999999999863
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=92.74 E-value=0.73 Score=48.08 Aligned_cols=44 Identities=25% Similarity=0.267 Sum_probs=31.9
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEC---CCCHHHHHHHHHHcCCCC
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVT---GDNLQTAKAIALECGILG 678 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlT---GD~~~ta~~ia~~~gi~~ 678 (1023)
.++.-+++.++++.++++|+++.++| |.........-+++|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 34455788999999999999999999 555555555556677753
|
| >2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=90.81 E-value=0.055 Score=35.33 Aligned_cols=24 Identities=42% Similarity=0.793 Sum_probs=20.8
Q ss_pred hhhhHHHhh-hhhhccccccccccc
Q 042091 49 SLKRWRQAS-LVLNASRRFRYTLDL 72 (1023)
Q Consensus 49 ~~~~w~~~~-~~l~~~~~~~y~~~~ 72 (1023)
+++|||++. .+.|+.++|+|.+++
T Consensus 1 al~rWR~a~~~v~n~~rrfr~~~~L 25 (26)
T 2l1w_B 1 ARQRWRSSVSIVKNRARRFRMISNL 25 (26)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHC
T ss_pred CchhHHHHHHHHhCccccccccccc
Confidence 468999995 889999999998875
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=90.63 E-value=0.35 Score=56.42 Aligned_cols=98 Identities=13% Similarity=0.129 Sum_probs=64.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCC------CHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhce
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGD------NLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEIT 710 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD------~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~ 710 (1023)
++.|++.++++.|+++|+++.++|+- ......... .|+... ...++.+++..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~-----fd~i~~~~~~~--------------- 157 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMH-----FDFLIESCQVG--------------- 157 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTT-----SSEEEEHHHHT---------------
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhh-----eeEEEeccccC---------------
Confidence 68899999999999999999999996 222222221 133321 12455555432
Q ss_pred EeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 711 VMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
...-.|+-=..+.+.+.-..+.++++||+.||..+-+.|++....-
T Consensus 158 -~~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 158 -MVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp -CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred -CCCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 1223344444455555545567899999999999999999987654
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=90.13 E-value=0.078 Score=54.58 Aligned_cols=87 Identities=16% Similarity=0.145 Sum_probs=55.0
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH----cCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE----CGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~----~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a 713 (1023)
+.+++.+.++.|+++|+++.++|+.....+..+.+. .+... .|... ..+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~-----------~~~~~---------------~~~~ 142 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA-----------TNMNP---------------VIFA 142 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT-----------TTBCC---------------CEEC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc-----------cccch---------------hhhc
Confidence 467999999999999999999999875433333322 22210 00000 0111
Q ss_pred c--CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 714 R--SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 714 r--~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
. ..|+-.. +.+++.|- ++|+||..+|..+-+.|++-.
T Consensus 143 ~~KP~p~~~~---~~~~~~g~-~l~VGDs~~Di~aA~~aG~~~ 181 (211)
T 2b82_A 143 GDKPGQNTKS---QWLQDKNI-RIFYGDSDNDITAARDVGARG 181 (211)
T ss_dssp CCCTTCCCSH---HHHHHTTE-EEEEESSHHHHHHHHHTTCEE
T ss_pred CCCCCHHHHH---HHHHHCCC-EEEEECCHHHHHHHHHCCCeE
Confidence 1 2233333 34444454 999999999999999999753
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=87.67 E-value=0.35 Score=52.53 Aligned_cols=52 Identities=15% Similarity=0.166 Sum_probs=36.8
Q ss_pred CCEEEEEcCCc-cCHHHhhhCCccEEecCCC--C-HHHH---------hccCccccCCChhHHHHHH
Q 042091 731 GDVVAVTGDGT-NDAPALHEADIGLAMGIQG--T-EVAK---------ENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 731 g~~V~~iGDG~-ND~~aL~~AdvgIamg~~g--~-~~ak---------~~adiil~~~~~~~i~~~i 784 (1023)
.+.++|+||+. ||..|.+.|++...+-..| . +..+ ..+|+++. ++..+...+
T Consensus 232 ~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~--~l~el~~~l 296 (306)
T 2oyc_A 232 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVE--SIADLTEGL 296 (306)
T ss_dssp GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEES--SGGGGGGGC
T ss_pred hHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEEC--CHHHHHHHH
Confidence 35699999996 9999999999987762222 2 2222 35788886 677776665
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=85.93 E-value=0.016 Score=58.63 Aligned_cols=40 Identities=23% Similarity=0.215 Sum_probs=35.5
Q ss_pred CCcccHHHHHHHHHhC-CCEEEEECCCCHHHHHHHHHHcCC
Q 042091 637 PCRPGVKDAVKLCRDA-GVKVRMVTGDNLQTAKAIALECGI 676 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~a-Gi~v~mlTGD~~~ta~~ia~~~gi 676 (1023)
++.|++.++++.|+++ |+++.++|+.....+..+.+.+|+
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 6789999999999999 999999999988777777777766
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=85.69 E-value=0.96 Score=47.54 Aligned_cols=116 Identities=12% Similarity=0.050 Sum_probs=62.0
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEECCCCHHH--HHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhce-
Q 042091 634 IKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQT--AKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEIT- 710 (1023)
Q Consensus 634 ~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t--a~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~- 710 (1023)
-...+.+++.++++.|+ +|+++ ++|...... +.. ....-..+. +.++.+...-.
T Consensus 123 ~~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~-----------------~~~~~~~l~----~~f~~~~~~~~~ 179 (264)
T 1yv9_A 123 DTELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERG-----------------LLPGAGSVV----TFVETATQTKPV 179 (264)
T ss_dssp CTTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTE-----------------EEECHHHHH----HHHHHHHTCCCE
T ss_pred CCCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCC-----------------cccCCcHHH----HHHHHHhCCCcc
Confidence 34567899999999997 89997 777654421 000 000000000 01111111001
Q ss_pred EeccCCHhhHHHHHHHHHhCCCEEEEEcCC-ccCHHHhhhCCcc---EEecCCCC-HHHHh---ccCcccc
Q 042091 711 VMGRSSPNDKLLLVQALRKGGDVVAVTGDG-TNDAPALHEADIG---LAMGIQGT-EVAKE---NSDIIIL 773 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG-~ND~~aL~~Advg---Iamg~~g~-~~ak~---~adiil~ 773 (1023)
....-.|+-=..+.+.+.-..+.++||||+ .||..+.++|++. +..| .+. +..++ .+|+++.
T Consensus 180 ~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g-~~~~~~l~~~~~~~d~v~~ 249 (264)
T 1yv9_A 180 YIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSG-FTPKSAVPTLPTPPTYVVD 249 (264)
T ss_dssp ECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTS-SSCSSSTTTCSSCCSEEES
T ss_pred ccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCC-CCCHHHHHhcCCCCCEEEe
Confidence 112233333333444444334679999999 6999999999987 4444 222 12222 5788875
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=84.23 E-value=1 Score=42.92 Aligned_cols=41 Identities=15% Similarity=0.062 Sum_probs=34.8
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCC---HHHHHHHHHHcCCCC
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDN---LQTAKAIALECGILG 678 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~---~~ta~~ia~~~gi~~ 678 (1023)
+-|++.++|++++++|++++++||++ ...+....++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 44689999999999999999999998 566777777888864
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=83.98 E-value=0.69 Score=52.73 Aligned_cols=40 Identities=15% Similarity=0.200 Sum_probs=33.9
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCC------------HHHHHHHHHHcCCC
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDN------------LQTAKAIALECGIL 677 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~------------~~ta~~ia~~~gi~ 677 (1023)
+-|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999955 22367788888984
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1023 | ||||
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 4e-39 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 5e-16 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-15 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 6e-38 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 5e-37 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-30 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 6e-22 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 1e-18 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-17 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 1e-11 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 3e-09 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 2e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-05 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 4e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 3e-04 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 8e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 0.001 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.001 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 0.003 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 150 bits (379), Expect = 4e-39
Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 32/280 (11%)
Query: 745 PALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTV 804
P A I + + +AK+N+ + S+ V GR+++ N+++FI++ ++
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYNNMKQFIRYLISS 245
Query: 805 NVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEP 864
NV ++ + A L VQLLWVNL+ D L A AL PP +M R P KEP
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 865 LITNIMWRNLIVQALYQVTVLLV--------------LNFKGTSILHLEGERRQHASDVK 910
LI+ ++ + Y + + + + E H +
Sbjct: 306 LISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLD 365
Query: 911 ---------NTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIII 961
TM + V ++ N N+ ++ + N +G I ++ L +I
Sbjct: 366 CEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI 425
Query: 962 --IEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMI 999
++ L K LD WL + I L L + K I
Sbjct: 426 LYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 465
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 79.7 bits (196), Expect = 5e-16
Identities = 37/178 (20%), Positives = 68/178 (38%), Gaps = 23/178 (12%)
Query: 311 EDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSV 370
++TPLQ +L+ + V + V + + F + V G + +
Sbjct: 126 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF-----------NDPVHGGSWI 174
Query: 371 SDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSA 430
A+ I V + V A+PEGLP +T LA R+M A+VR L +
Sbjct: 175 RGAIYYFK-----------IAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPS 223
Query: 431 CETMGSATTICSDKTGTLTLNEMTV-VEAFIGRKKINPPDDSSQMHSIVIYLLSEGIA 487
ET+G A + ++ V + P+ + + + L+++G+
Sbjct: 224 VETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLP 281
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 78.6 bits (193), Expect = 1e-15
Identities = 30/176 (17%), Positives = 60/176 (34%), Gaps = 19/176 (10%)
Query: 84 MIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEA 143
M AH++ + + G++ + +G N P ++G+S + E
Sbjct: 1 MEAAHSK--STEECLAYFGVSETTGLT--PDQVKRHLEKYGHNELPAEEGKSLWELVIEQ 56
Query: 144 WQDLTLIILIVAAIASLALGIKTEGVEE--GWYDGASIAFAVFLVIVVTAISDYRQSLQF 201
++DL + IL++AA S L EG E + + I + +V +
Sbjct: 57 FEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNA---- 112
Query: 202 QNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAI 257
+EA++ + D + G+Q+ L+ I
Sbjct: 113 --------ENAIEALKEYEPAATEQ-DKTPLQQKLDEFGEQLSKVISLICVAVWLI 159
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 137 bits (346), Expect = 6e-38
Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 2/159 (1%)
Query: 629 LAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNI 688
DP R V +++LCRDAG++V M+TGDN TA AI GI G + E D
Sbjct: 12 TLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD-RA 70
Query: 689 IEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALH 748
G+ F L E+ + + R P+ K +V+ L+ ++ A+TGDG NDAPAL
Sbjct: 71 YTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALK 130
Query: 749 EADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWG 787
+A+IG+AMG GT VAK S++++ DDNF+++V V G
Sbjct: 131 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 141 bits (356), Expect = 5e-37
Identities = 41/384 (10%), Positives = 97/384 (25%), Gaps = 51/384 (13%)
Query: 420 ADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVV----EAFIGRKKINPPDDSSQMH 475
+ + L +G + I + + ++ + + + K + + M
Sbjct: 22 SALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDML 81
Query: 476 SIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVL 535
IV + I + +A + + +K + +
Sbjct: 82 FIVFSIHLIDILKKL----------------SHDEIEAFMYQDEPVELKLQNISTNLADC 125
Query: 536 HVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKA 595
+ N+ + A + S K
Sbjct: 126 FNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDA--------------TLFSLKG 171
Query: 596 AVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPC--RPGVKDAVKLCRDAG 653
A+ +A + + + D + + VK + + AG
Sbjct: 172 ALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAG 231
Query: 654 VKVRMVTGDNLQTAKAIALECGILG--SDAEANDPNIIEGKVFRALSDKEREK----VAQ 707
++ + TG G+L + + + K
Sbjct: 232 FELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI 291
Query: 708 EITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEAD---IGLAMGIQGTEVA 764
+ + Q D V + GD D + + IG G++G + A
Sbjct: 292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAA 351
Query: 765 KE----NSDIIILDDNFASVVKVV 784
E ++D +I ++ + V+
Sbjct: 352 GELEAHHADYVI--NHLGELRGVL 373
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 118 bits (296), Expect = 1e-30
Identities = 35/211 (16%), Positives = 64/211 (30%), Gaps = 23/211 (10%)
Query: 453 MTVVEAFIGRKKI------NPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAV--- 503
MTV + + + + S LS ++ +V
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 504 EVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVK--RINSEVHVH 561
+ +G +E A+L ++R + FNS K + +
Sbjct: 62 DTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLV 121
Query: 562 WKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYR-------- 613
KGA E IL C+ L ++ +D F+ A E+ R +
Sbjct: 122 MKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFP 181
Query: 614 ----FILDKWTLPEEELILLAIVGIKDPCRP 640
F D+ P E+L + ++ + D
Sbjct: 182 RGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 90.5 bits (224), Expect = 6e-22
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 34/161 (21%)
Query: 625 ELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEAN 684
+ G D + K AV+ + G+KV M+TGDN ++A+A
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEA--------------- 53
Query: 685 DPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDA 744
+ V+ P+ K V+ L+ VVA GDG NDA
Sbjct: 54 -----------------ISRELNLDLVIAEVLPHQKSEEVKKLQAKE-VVAFVGDGINDA 95
Query: 745 PALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785
PAL +AD+G+A+G G++VA E+ DI+++ D+ VV ++
Sbjct: 96 PALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 84.2 bits (207), Expect = 1e-18
Identities = 36/232 (15%), Positives = 71/232 (30%), Gaps = 48/232 (20%)
Query: 445 TGTLTLNEMTVV--------EAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFV 496
+LNE ++ E K I + L+ A ++
Sbjct: 14 GDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDG------LVELATICALCNDSSLDF 67
Query: 497 PKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSET----------------TVLHVFPF 540
+ E G TE A+ + K+ + VR+ + F
Sbjct: 68 NETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEF 127
Query: 541 NSEKKRGGVAVK-----RINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKA 595
+ ++K V R + KGA E ++ C ++ ++ +
Sbjct: 128 SRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILS 187
Query: 596 AVDE--MAARSLRCVAIAYRFI-----------LDKWTLPEEELILLAIVGI 634
+ E +LRC+A+A R ++ E +L + +VG+
Sbjct: 188 VIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 80.0 bits (196), Expect = 2e-17
Identities = 27/226 (11%), Positives = 61/226 (26%), Gaps = 17/226 (7%)
Query: 578 DTDGQLQSIDGDEDFFK-------AAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLA 630
D DG + D + K A+ + + + +E I +
Sbjct: 10 DFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEIT-S 68
Query: 631 IVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE 690
V R G ++ V + + +++G + D + +
Sbjct: 69 FVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK--DRIYCNHASFD 126
Query: 691 GKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEA 750
+ K ++ L + + + GD D A +
Sbjct: 127 NDYI------HIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLS 180
Query: 751 DIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQK 796
D+ A +E + + +F + K + + V +Q
Sbjct: 181 DLCFARDY-LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 60.1 bits (145), Expect = 1e-11
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 217 RGGKAV--KISIFDVVVGEIVPLRIGDQVPADGVLVTGH--SLAIDESSMTGESKIVRKD 272
R + +I D+V G+IV + +GD+VPAD +++ +L +D+S +TGES V K
Sbjct: 7 RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKH 66
Query: 273 ------------HKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASI 309
K L SG +A G +V G++TE G + +
Sbjct: 67 TEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.1 bits (134), Expect = 3e-09
Identities = 35/228 (15%), Positives = 76/228 (33%), Gaps = 26/228 (11%)
Query: 556 SEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAA-----VDEMAARSLRCVAI 610
SE+ + A + D D + +G ++ K V EM R++ A+
Sbjct: 1 SELRKLFYSADAVCF-------DVDSTVIREEGIDELAKICGVEDAVSEMTRRAMG-GAV 52
Query: 611 AYRFILDKWTLPEEEL---ILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTA 667
++ L + + + I PG+++ V ++ V+V +++G
Sbjct: 53 PFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIV 112
Query: 668 KAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQAL 727
+ +A + + + + E + + L++
Sbjct: 113 EHVASKLN--------IPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEK 164
Query: 728 RKGGDVVAVTGDGTNDAPALHEADIGLAMG-IQGTEVAKENSDIIILD 774
++ + GDG D A AD + G + K+N+ I D
Sbjct: 165 FHFKKIIMI-GDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 47.9 bits (112), Expect = 2e-06
Identities = 30/215 (13%), Positives = 71/215 (33%), Gaps = 19/215 (8%)
Query: 577 LDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKD 636
D D L + + ++ + A E + + A+ + ++ L+ + +
Sbjct: 9 FDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVE 68
Query: 637 ------PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE 690
G ++ +K ++ G V +V+G I + G+ + A
Sbjct: 69 KAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVK--- 125
Query: 691 GKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEA 750
D + + + + + + + GDG ND +A
Sbjct: 126 --------DGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKA 177
Query: 751 DIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785
+ +A + KE +DI I + ++K ++
Sbjct: 178 GLKIAFC--AKPILKEKADICIEKRDLREILKYIK 210
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 46.5 bits (109), Expect = 5e-06
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Query: 708 EITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEN 767
+ + + + L VA GDG ND A +A+ Q ++ KEN
Sbjct: 145 HVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKILKEN 203
Query: 768 SDIIILDDNFASVVKVVRW 786
+D + + + +
Sbjct: 204 ADYVTKKEYGEGGAEAIYH 222
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.4 bits (106), Expect = 1e-05
Identities = 26/199 (13%), Positives = 56/199 (28%), Gaps = 54/199 (27%)
Query: 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNII--EGKVFRAL 697
++++ G+ V +++G+ + A+ + GI G N + +G + +
Sbjct: 23 TKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFF 82
Query: 698 SDKEREKVAQEIT-----------------VMGRSSPNDKLLLVQALRKGGDVV------ 734
S++ K +E++ P D + + G V+
Sbjct: 83 SNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYS 142
Query: 735 ----------------------------AVTGDGTNDAPALHEADIGLAMGIQGTEVAKE 766
V GD ND P T+ K
Sbjct: 143 WHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKA 201
Query: 767 NSDIIILDDNFASVVKVVR 785
SD + + ++ +
Sbjct: 202 VSDFVSDYSYGEEIGQIFK 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 43.3 bits (101), Expect = 4e-05
Identities = 12/51 (23%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Query: 725 QALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDD 775
A + V GD ND L EA G+ V +E +
Sbjct: 139 IAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHT 188
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 42.2 bits (98), Expect = 2e-04
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Query: 732 DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVF 791
V GD NDA L A AMG E K+ + D+N + V++ V
Sbjct: 207 QNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA---VL 262
Query: 792 ANIQKF 797
N F
Sbjct: 263 DNTYPF 268
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.8 bits (97), Expect = 3e-04
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 732 DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785
+ AV GD ND L A G+AMG E K +D + L ++ V +++
Sbjct: 231 ETAAV-GDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 40.3 bits (93), Expect = 8e-04
Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 732 DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785
+ + GD ND + A +G+A+ KE ++ + + V +
Sbjct: 214 EEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 39.9 bits (92), Expect = 0.001
Identities = 46/256 (17%), Positives = 78/256 (30%), Gaps = 45/256 (17%)
Query: 574 TK--YLDTDGQLQSIDGDE--DFFKAAVDEMAARSLRCV--------AIAYRFILDKWTL 621
TK + D DG L S + A++ A+ L+ I L L
Sbjct: 1 TKALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDRNL 60
Query: 622 PEEELILLAIVGIKDPCRPG--------VKDAVKLCRDAGVKVRMVTGDNL--------- 664
+ + + VK C GV V N+
Sbjct: 61 IDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMV 120
Query: 665 --QTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPN---- 718
+ + S EA++ +I+ F +++ + +GR P
Sbjct: 121 KKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAFADV 180
Query: 719 -----DKLLLVQALRKGGDV----VAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSD 769
K + + + + GDG ND L A IG+AMG Q E K +D
Sbjct: 181 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAAD 239
Query: 770 IIILDDNFASVVKVVR 785
+ + + K ++
Sbjct: 240 YVTAPIDEDGISKAMK 255
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.6 bits (91), Expect = 0.001
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 732 DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785
+ + V GD ND EA + +AM E KE SDI+ L +N + V V+
Sbjct: 207 EEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 38.4 bits (88), Expect = 0.003
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 732 DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVV 784
D V V GD ND L A+ T+ AK ++ ++ + V +
Sbjct: 224 DQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYL 275
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1023 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.95 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.94 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.94 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.91 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.85 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.22 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.2 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.03 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.98 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.98 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.94 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.89 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.89 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.84 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.83 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.83 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.72 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.7 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.63 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.54 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.32 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.66 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.61 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.46 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.42 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.34 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.16 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.13 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.97 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.96 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.86 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.36 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.31 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.25 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.0 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.86 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.77 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.61 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.61 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.43 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 94.84 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.76 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.25 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.97 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 93.83 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 93.62 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 93.5 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 92.39 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 90.98 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 90.94 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 90.32 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 90.32 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 90.23 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 89.86 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 83.74 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2.9e-46 Score=438.44 Aligned_cols=440 Identities=24% Similarity=0.321 Sum_probs=350.0
Q ss_pred hhhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 042091 88 HAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTE 167 (1023)
Q Consensus 88 ~~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~ 167 (1023)
.+|...++++.+.|+||+++|||++ |+++|+++||+|+++.++.+++|+.++++|+++++++|++++++|++.+...+
T Consensus 3 ~~h~~~~e~v~~~l~td~~~GLs~~--ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~ 80 (472)
T d1wpga4 3 AAHSKSTEECLAYFGVSETTGLTPD--QVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEE 80 (472)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHH--HHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSC
T ss_pred ChhhCCHHHHHHHhCcCcccCcCHH--HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 3577789999999999999999988 89999999999999999999999999999999999999999999999998755
Q ss_pred CCc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCc
Q 042091 168 GVE--EGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPA 245 (1023)
Q Consensus 168 ~~~--~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPa 245 (1023)
+.. ..|+|++.++++++++..++.++|+++++..+++++.....
T Consensus 81 ~~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~---------------------------------- 126 (472)
T d1wpga4 81 GEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA---------------------------------- 126 (472)
T ss_dssp TTSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC----------------------------------
T ss_pred ccccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc----------------------------------
Confidence 433 37999999998899999999999999999998887654310
Q ss_pred cEEEEeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHH
Q 042091 246 DGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNG 325 (1023)
Q Consensus 246 Dgill~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~ 325 (1023)
..++++|+|.++++
T Consensus 127 ------------------------------------------------------------------~~~~~~P~d~~l~~ 140 (472)
T d1wpga4 127 ------------------------------------------------------------------TEQDKTPLQQKLDE 140 (472)
T ss_dssp ------------------------------------------------------------------CCCCCCHHHHHHHH
T ss_pred ------------------------------------------------------------------ccccCchHHHHHHH
Confidence 01235777778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhH
Q 042091 326 VATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPL 405 (1023)
Q Consensus 326 ~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~l 405 (1023)
++..++..+..++...+... .++.........| ...+.+.|..+ ++++|+++|||||+
T Consensus 141 ~g~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~----------~~~~~~~~~~a-------i~l~V~~iPEgLp~ 198 (472)
T d1wpga4 141 FGEQLSKVISLICVAVWLIN-----IGHFNDPVHGGSW----------IRGAIYYFKIA-------VALAVAAIPEGLPA 198 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-----CTTSSSCCSSSCS----------SSCGGGHHHHH-------HHHHHHHSCTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHhhhhh----------HHHHHHHHHHH-------HHHHHHhChhhHHH
Confidence 88777666555444443321 1221111111111 11245567777 99999999999999
Q ss_pred HHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHH
Q 042091 406 AVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEG 485 (1023)
Q Consensus 406 av~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 485 (1023)
+++++++++++||+|+|++||+++++|++|+.+++|+|||-
T Consensus 199 ~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i--------------------------------------- 239 (472)
T d1wpga4 199 VITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFI--------------------------------------- 239 (472)
T ss_dssp HHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHH---------------------------------------
T ss_pred HHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhh---------------------------------------
Confidence 99999999999999999999999999988888777777761
Q ss_pred HHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCc
Q 042091 486 IAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGA 565 (1023)
Q Consensus 486 i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa 565 (1023)
T Consensus 240 -------------------------------------------------------------------------------- 239 (472)
T d1wpga4 240 -------------------------------------------------------------------------------- 239 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHH
Q 042091 566 AEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDA 645 (1023)
Q Consensus 566 ~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~ 645 (1023)
T Consensus 240 -------------------------------------------------------------------------------- 239 (472)
T d1wpga4 240 -------------------------------------------------------------------------------- 239 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHH
Q 042091 646 VKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQ 725 (1023)
Q Consensus 646 I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~ 725 (1023)
T Consensus 240 -------------------------------------------------------------------------------- 239 (472)
T d1wpga4 240 -------------------------------------------------------------------------------- 239 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 042091 726 ALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVN 805 (1023)
Q Consensus 726 ~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n 805 (1023)
+|+++.|
T Consensus 240 -------------------------------------------------------------------------~~~l~~n 246 (472)
T d1wpga4 240 -------------------------------------------------------------------------RYLISSN 246 (472)
T ss_dssp -------------------------------------------------------------------------HHHHHHH
T ss_pred -------------------------------------------------------------------------hhhhhhh
Confidence 1111111
Q ss_pred HHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q 042091 806 VAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVL 885 (1023)
Q Consensus 806 v~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (1023)
+..+...+++.++..+.|++++|+||+|+++|.+|+++|+.|||++++|+|||++++++++++.+|++++.++++...++
T Consensus 247 ~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~ 326 (472)
T d1wpga4 247 VGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAAT 326 (472)
T ss_dssp HHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCSSCTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCCCccccCHHHHHHHHHHHHHHHHHH
Confidence 22223344567788899999999999999999999999999999999999999999999999999999999999988776
Q ss_pred HHHHHhhhcccccc-c----------------------cccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCc
Q 042091 886 LVLNFKGTSILHLE-G----------------------ERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVT 942 (1023)
Q Consensus 886 ~~l~~~~~~~~~~~-~----------------------~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~ 942 (1023)
+.++++........ + ........+++|++|++++++|++|.+++|+.++..+.++++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~rs~~~s~~~~~~~ 406 (472)
T d1wpga4 327 VGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPW 406 (472)
T ss_dssp HHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGG
T ss_pred HHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHHHHHHHHHHHHHhcCCcchhhcCcc
Confidence 66555433221100 0 000112345789999999999999999999987666667899
Q ss_pred chHHHHHHHHHHHHHHHHH--HHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 042091 943 KNYLFMGIIGITCVLQIII--IEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPK 1003 (1023)
Q Consensus 943 ~n~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 1003 (1023)
+|++++.++++++++|+++ +|+++.+|++.||++.+|+++++++++.++++|++|++.|++
T Consensus 407 ~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~~R~~ 469 (472)
T d1wpga4 407 VNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 469 (472)
T ss_dssp GCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999998888888888766 578999999999999999999999999999999999987643
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.6e-33 Score=278.21 Aligned_cols=150 Identities=42% Similarity=0.683 Sum_probs=143.6
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
||+|++++++|+.|+++||+|+|+|||+..||.++|+++||...+.+ .....++|+++..+++.++.+..++..+|+|+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEE-VADRAYTGREFDDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCC-CTTTEEEHHHHHHSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccc-cccccccccccchhhHHHHhhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999876543 23467899999999999999999999999999
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHH
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWG 787 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~g 787 (1023)
+|+||..+|+.||++|++|+|+|||.||+|||++|||||+|+ +|+++|+++||+++++++|..++++|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999 99999999999999999999999999998
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.95 E-value=3.6e-28 Score=232.11 Aligned_cols=125 Identities=38% Similarity=0.582 Sum_probs=110.2
Q ss_pred EEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHH
Q 042091 627 ILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVA 706 (1023)
Q Consensus 627 ~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~ 706 (1023)
+..+.++++|++|++++++|+.|+++|++++|+|||+..+|.++|++|||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 445578999999999999999999999999999999999999999999996
Q ss_pred hhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 707 QEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 707 ~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.++++++|++|.++|+.+|+. ++|+|+|||.||+|||++|||||||+ ++++.++++||+++++++|.+++.+|+
T Consensus 62 ---~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 ---LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp ---EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred ---hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 489999999999999999875 58999999999999999999999999 899999999999999999999999874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.94 E-value=3.2e-31 Score=301.34 Aligned_cols=327 Identities=13% Similarity=0.022 Sum_probs=226.9
Q ss_pred ccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceee
Q 042091 426 RRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEV 505 (1023)
Q Consensus 426 r~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~ 505 (1023)
+-+.+.|+||..+++|+|||||+|.|+|++..+..+ ..... -....++.+ ++++....+++. ... ...
T Consensus 28 ~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~-~il~~-~k~~g~n~~-~dl~~~~~~~~~-~~~--------~~~ 95 (380)
T d1qyia_ 28 ELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKD-KILNK-LKSLGLNSN-WDMLFIVFSIHL-IDI--------LKK 95 (380)
T ss_dssp HHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTT-HHHHH-HHHTTCCCH-HHHHHHHHHHHH-HHH--------HTT
T ss_pred HHhhchhhcccceeeecCcccchhhhhheeeeecch-hhhHh-hhhcCCChh-HHHHHHHHHHHH-HHH--------Hhh
Confidence 345567999999999999999999999987532211 10000 000001111 222222222111 111 112
Q ss_pred cCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCcccc
Q 042091 506 SGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQS 585 (1023)
Q Consensus 506 ~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~ 585 (1023)
.++|++.+++...+..+......++.+......||++.+|+|++.....++.+....||+++.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~--------------- 160 (380)
T d1qyia_ 96 LSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH--------------- 160 (380)
T ss_dssp SCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT---------------
T ss_pred cCCCcHHHHHHHHhhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC---------------
Confidence 46788988887655444455566667777788999999999987655444444444556655431
Q ss_pred CCchH-HHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcc--cHHHHHHHHHhCCCEEEEECCC
Q 042091 586 IDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRP--GVKDAVKLCRDAGVKVRMVTGD 662 (1023)
Q Consensus 586 l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~--~~~~~I~~l~~aGi~v~mlTGD 662 (1023)
+++.. ..+++.+..++.+|+|++++||+.+...+.....+....|++..+|++|| +++++++.|+++|+++.|+|||
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~ 240 (380)
T d1qyia_ 161 VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGR 240 (380)
T ss_dssp CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccccccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCC
Confidence 12222 45667788999999999999999886544444455567799999999554 9999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHH---------HHHHHhhceEeccCCHhhHHHHHHHHHhCCCE
Q 042091 663 NLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKE---------REKVAQEITVMGRSSPNDKLLLVQALRKGGDV 733 (1023)
Q Consensus 663 ~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~---------~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~ 733 (1023)
+..+|.++++++||..... ...++++.+........ -...+....+++|++|++|..+++.++..++.
T Consensus 241 ~~~~a~~il~~lgl~~~F~---~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~ 317 (380)
T d1qyia_ 241 PYTETVVPFENLGLLPYFE---ADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDD 317 (380)
T ss_dssp CHHHHHHHHHHHTCGGGSC---GGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTT
T ss_pred CHHHHHHHHHHcCCcccCC---cceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCe
Confidence 9999999999999975321 12345555432111000 01223344568899999999999999999999
Q ss_pred EEEEcCCccCHHHhhhCC---ccEEecCCCCHHHHh----ccCccccCCChhHHHHHH
Q 042091 734 VAVTGDGTNDAPALHEAD---IGLAMGIQGTEVAKE----NSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 734 V~~iGDG~ND~~aL~~Ad---vgIamg~~g~~~ak~----~adiil~~~~~~~i~~~i 784 (1023)
|+|||||.||++|+|.|| |||+||..|++..++ .||+++. ++..+.+++
T Consensus 318 ~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~--~~~el~~il 373 (380)
T d1qyia_ 318 VFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--HLGELRGVL 373 (380)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--SGGGHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEEC--CHHHHHHHH
Confidence 999999999999999999 999999888876554 8999995 677766554
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.94 E-value=1e-26 Score=242.39 Aligned_cols=187 Identities=18% Similarity=0.198 Sum_probs=140.5
Q ss_pred eEEEEEEeCCcccCCCC-------CCCcccHHHHHHHHHHHHccCCCcccccCCC---CceeecCChHHHHHHHHHHHcC
Q 042091 453 MTVVEAFIGRKKINPPD-------DSSQMHSIVIYLLSEGIAQNTTGNVFVPKDG---EAVEVSGSPTEKAILSWAVKLG 522 (1023)
Q Consensus 453 m~v~~~~~~~~~~~~~~-------~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~---~~~~~~g~p~e~All~~a~~~g 522 (1023)
|+|+++|++++.++... .....++.. ..|..+.+.|+.+.+..+.++ ..+...|+|+|.||+.++.+.|
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~ 80 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTW-TALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSC 80 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHH-HHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHH
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHH-HHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhC
Confidence 89999999887654221 111223333 444445555555544222111 1245689999999999999999
Q ss_pred CChhcccccccEEEEecCCCCCceEEEEEeec--CCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHH
Q 042091 523 MKFDRVRSETTVLHVFPFNSEKKRGGVAVKRI--NSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDE 599 (1023)
Q Consensus 523 ~~~~~~~~~~~il~~~~F~s~~k~msviv~~~--~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~ 599 (1023)
.+....++.+++++++||+|+||+|+++++.+ ++.+++|+|||||.|+++|++++. +|...+++++. +.+.+.+++
T Consensus 81 ~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~ 159 (214)
T d1q3ia_ 81 GSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLE 159 (214)
T ss_dssp SCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHH
T ss_pred CCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHH
Confidence 99999999999999999999999999999875 456889999999999999998875 78889999888 899999999
Q ss_pred HHhccchhhhhhhcccccc------------CCCCCCCcEEEeeeeccCCCccc
Q 042091 600 MAARSLRCVAIAYRFILDK------------WTLPEEELILLAIVGIKDPCRPG 641 (1023)
Q Consensus 600 ~a~~glr~l~~ayk~~~~~------------~~~~e~~l~~lG~i~~~D~lr~~ 641 (1023)
|+.+|+||||+|||.+..+ .+..|+||+|+|++||+||||++
T Consensus 160 ~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 160 LGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred HhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 9999999999999998432 23457899999999999999975
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.91 E-value=7.6e-25 Score=201.76 Aligned_cols=98 Identities=34% Similarity=0.502 Sum_probs=89.2
Q ss_pred eEEEEECCEE--EEEEeccceeccEEEecCCCccCccEEEEeeC--CeEEeeccccCCCceeccCC------------CC
Q 042091 212 QLEAMRGGKA--VKISIFDVVVGEIVPLRIGDQVPADGVLVTGH--SLAIDESSMTGESKIVRKDH------------KT 275 (1023)
Q Consensus 212 ~~~V~R~g~~--~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~--~l~VDES~LTGES~pv~K~~------------~~ 275 (1023)
.++|+|+|++ ++|+++||||||||.|++||+|||||+|++++ ++.||||+|||||.|+.|.+ ..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5789999985 78999999999999999999999999998744 48899999999999999964 24
Q ss_pred CeeeccceEeecceeEEEEEEecccHHHHHHhhc
Q 042091 276 PFLMSGCKVADGVGTMMVTGVGINTEWGLLMASI 309 (1023)
Q Consensus 276 ~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~ 309 (1023)
|++|+||.|.+|.++++|++||.+|.+|+|++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 6899999999999999999999999999998753
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.85 E-value=1.1e-21 Score=207.54 Aligned_cols=191 Identities=20% Similarity=0.195 Sum_probs=139.2
Q ss_pred eeeeCCccccccCceEEEEEEeCCcccCCCCCC--------CcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChH
Q 042091 439 TICSDKTGTLTLNEMTVVEAFIGRKKINPPDDS--------SQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPT 510 (1023)
Q Consensus 439 ~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~--------~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~ 510 (1023)
..+.||++..| +...++.+.|..|.+.+.. ....+.+..++ .+.+.|+.+.+...++++.++..|+|+
T Consensus 6 m~v~~~~~~~~---~~~~~~~VtG~~y~p~G~i~~~~~~v~~~~~~~l~~ll-~~~~LCn~a~l~~~~~~~~~~~~G~pT 81 (239)
T d1wpga3 6 MFIIDKVDGDF---CSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELA-TICALCNDSSLDFNETKGVYEKVGEAT 81 (239)
T ss_dssp EEEEEEEETTE---EEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHH-HHHHHSCSCEEEEETTTTEEEEESCHH
T ss_pred EEEEeeecCCc---ccceEEEEEeEeeCCceEEEECCcCcCccccHHHHHHH-HHHHhcCCCEeeecCCCCeEEEcCCCC
Confidence 34667764444 3344444455555543321 11123344444 444455555554444456678899999
Q ss_pred HHHHHHHHHHcCCChhcc----------------cccccEEEEecCCCCCceEEEEEeecCC-----eEEEEEeCchHHH
Q 042091 511 EKAILSWAVKLGMKFDRV----------------RSETTVLHVFPFNSEKKRGGVAVKRINS-----EVHVHWKGAAEMI 569 (1023)
Q Consensus 511 e~All~~a~~~g~~~~~~----------------~~~~~il~~~~F~s~~k~msviv~~~~~-----~~~~~~KGa~e~i 569 (1023)
|.||+.++.+.|+..... +..+++++++||+|+||||+|+++.+++ .+++|+|||||.|
T Consensus 82 E~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~i 161 (239)
T d1wpga3 82 ETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGV 161 (239)
T ss_dssp HHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHH
T ss_pred cHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHH
Confidence 999999999998766543 3468899999999999999999997654 3789999999999
Q ss_pred HHhhccccccCCccccCCchH-HHHHHHHHHH--HhccchhhhhhhccccccC-----------CCCCCCcEEEeeeec
Q 042091 570 LASCTKYLDTDGQLQSIDGDE-DFFKAAVDEM--AARSLRCVAIAYRFILDKW-----------TLPEEELILLAIVGI 634 (1023)
Q Consensus 570 l~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~--a~~glr~l~~ayk~~~~~~-----------~~~e~~l~~lG~i~~ 634 (1023)
+++|+.++. ++...+++++. +.+.+.++++ |++|+|||++|||+++.+. +..|+||+|+|++||
T Consensus 162 L~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 162 IDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp HHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred HHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 999998775 67778999887 8888888886 6799999999999985321 235789999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.22 E-value=2.4e-11 Score=125.66 Aligned_cols=150 Identities=19% Similarity=0.202 Sum_probs=108.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhh----------------------
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVF---------------------- 694 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~---------------------- 694 (1023)
.+.+.+.+++++|+++|++++++||+....+..++..+++.......++..+......
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 5778899999999999999999999999999999999998753221111111100000
Q ss_pred ------------------hccCHHHHHHHHhhc-----------eEeccCCHhhHHHHHHHHHhC----CCEEEEEcCCc
Q 042091 695 ------------------RALSDKEREKVAQEI-----------TVMGRSSPNDKLLLVQALRKG----GDVVAVTGDGT 741 (1023)
Q Consensus 695 ------------------~~l~~~~~~~~~~~~-----------~v~ar~~P~~K~~iV~~lq~~----g~~V~~iGDG~ 741 (1023)
.....+.+.++..+. .+-.......|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 001123333333322 111223445788888777654 45699999999
Q ss_pred cCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHH
Q 042091 742 NDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWG 787 (1023)
Q Consensus 742 ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~g 787 (1023)
||.+||+.|++||||+ ++.+.+|+.||+|+.+++..++.+++++.
T Consensus 179 NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 9999999999999999 99999999999999999999999988754
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.20 E-value=2.5e-11 Score=125.73 Aligned_cols=151 Identities=17% Similarity=0.195 Sum_probs=106.8
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhh--hcc---------------
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVF--RAL--------------- 697 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~--~~l--------------- 697 (1023)
+.++.+++.++++.|++.|++++++||++...+..++..+|+.......++..+.+.+.. ...
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 345778999999999999999999999999999999999998754221111111111100 000
Q ss_pred --------------------CH---HHHHHHHhh--ceEe-----c--cCCHhhHHHHHHHHHhC----CCEEEEEcCCc
Q 042091 698 --------------------SD---KEREKVAQE--ITVM-----G--RSSPNDKLLLVQALRKG----GDVVAVTGDGT 741 (1023)
Q Consensus 698 --------------------~~---~~~~~~~~~--~~v~-----a--r~~P~~K~~iV~~lq~~----g~~V~~iGDG~ 741 (1023)
.. +++.+.... ..++ . .....+|...++.+.++ ...|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 01 111111111 1111 1 12235888888877653 34589999999
Q ss_pred cCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 742 NDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 742 ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
||.+|++.|++||||+ ++.+.+|+.||+++..++..++.+++++
T Consensus 178 nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 9999999999999999 9999999999999999999999998863
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.03 E-value=3.5e-10 Score=121.02 Aligned_cols=66 Identities=29% Similarity=0.362 Sum_probs=60.1
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 719 DKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 719 ~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+|...++.+.++ .+.|+++|||.||.+||+.|+.|+||+ ++.+.+|+.||+++.+++-.++.++++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 799999988764 346999999999999999999999999 999999999999999888889988886
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.98 E-value=1.7e-10 Score=122.56 Aligned_cols=67 Identities=28% Similarity=0.307 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 718 NDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 718 ~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.+|...++.|+++ | +.|+++|||.||.+||+.|+.|+||+ ++.+.+|+.||+++.+++-.++.++|+
T Consensus 189 ~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 189 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 3699999888765 2 45899999999999999999999999 999999999999999889899998886
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.98 E-value=4.5e-10 Score=119.28 Aligned_cols=149 Identities=18% Similarity=0.203 Sum_probs=105.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC---CCCCeeeec---------------------
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE---ANDPNIIEG--------------------- 691 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~---~~~~~vi~g--------------------- 691 (1023)
-.+-+.+.+++++|+++|++++++||++...+..+.+++++..+... .+++.+...
T Consensus 20 ~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~ 99 (271)
T d1rkqa_ 20 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 99 (271)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHH
Confidence 35778899999999999999999999999999999999998754210 000000000
Q ss_pred ---------------------h-----------------------hhhc---------c-CHHHHHHHHh--------hc
Q 042091 692 ---------------------K-----------------------VFRA---------L-SDKEREKVAQ--------EI 709 (1023)
Q Consensus 692 ---------------------~-----------------------~~~~---------l-~~~~~~~~~~--------~~ 709 (1023)
. .... . .++..++... +.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 0 0000 0 0111111111 11
Q ss_pred eEe------ccCCH--hhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCCh
Q 042091 710 TVM------GRSSP--NDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNF 777 (1023)
Q Consensus 710 ~v~------ar~~P--~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~ 777 (1023)
.+. ....| .+|...++.++++ ...++++|||.||.+||+.|++|+||+ ++.+..|+.||+++..++-
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~ 258 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLE 258 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTT
T ss_pred EEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCc
Confidence 111 11233 3799999988775 345899999999999999999999999 9999999999999998888
Q ss_pred hHHHHHHH
Q 042091 778 ASVVKVVR 785 (1023)
Q Consensus 778 ~~i~~~i~ 785 (1023)
.++.++++
T Consensus 259 ~Gv~~~l~ 266 (271)
T d1rkqa_ 259 DGVAFAIE 266 (271)
T ss_dssp THHHHHHH
T ss_pred ChHHHHHH
Confidence 88998886
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.94 E-value=6.9e-10 Score=109.76 Aligned_cols=106 Identities=18% Similarity=0.194 Sum_probs=85.2
Q ss_pred HHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHH
Q 042091 644 DAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLL 723 (1023)
Q Consensus 644 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~i 723 (1023)
.+|+.|++.|+.+.++||+....+...++++++.. ++.. ..+|...
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------~~~~--~~~K~~~ 84 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------FFLG--KLEKETA 84 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE--------------------------------EEES--CSCHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc--------------------------------cccc--cccHHHH
Confidence 47999999999999999999999999999999973 2222 2345555
Q ss_pred HHHHHh----CCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhH-HHHHH
Q 042091 724 VQALRK----GGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFAS-VVKVV 784 (1023)
Q Consensus 724 V~~lq~----~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~-i~~~i 784 (1023)
++.+.+ ..+.|+++||+.||.|||+.|++|+||+ ++.+.+|+.||+|+..+.-.+ +.+++
T Consensus 85 l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~ 149 (177)
T d1k1ea_ 85 CFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMS 149 (177)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHH
T ss_pred HHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHHH
Confidence 544433 2477999999999999999999999999 999999999999998776433 33333
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.89 E-value=3.8e-10 Score=116.18 Aligned_cols=129 Identities=19% Similarity=0.252 Sum_probs=93.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeee-echhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNII-EGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi-~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
+++|++.+.++.|+++|++++++||.....+..+++.+|+.....-.+...+. +|...... ......
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~------------~~~p~~ 149 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFD------------ETQPTA 149 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEEC------------TTSGGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccce------------eeeeee
Confidence 47899999999999999999999999999999999999997421100000000 11110000 000124
Q ss_pred CHhhHHHHHHHHHhC--CCEEEEEcCCccCHHHhhhCCccEEecCC-CCHHHHhccCccccCCChhH
Q 042091 716 SPNDKLLLVQALRKG--GDVVAVTGDGTNDAPALHEADIGLAMGIQ-GTEVAKENSDIIILDDNFAS 779 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~--g~~V~~iGDG~ND~~aL~~AdvgIamg~~-g~~~ak~~adiil~~~~~~~ 779 (1023)
.+..|.++++.++++ -..++++|||.||.+|++.||++||++.+ ..+..++.||+++. +|..
T Consensus 150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~e 214 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVE 214 (217)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGG
T ss_pred ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHH
Confidence 567899999999864 34689999999999999999999999733 34567788999986 4543
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.89 E-value=7.2e-10 Score=117.19 Aligned_cols=68 Identities=26% Similarity=0.338 Sum_probs=60.7
Q ss_pred hhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 718 NDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 718 ~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
.+|...++.|.++ ...++++|||.||.+||+.|+.|+||+ ++.+.+|+.||++..+++-.++.+++++
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 3798888888764 456899999999999999999999999 9999999999999998888999999863
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.84 E-value=3.8e-09 Score=111.93 Aligned_cols=66 Identities=35% Similarity=0.415 Sum_probs=59.3
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 719 DKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 719 ~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+|...++.+.++ ...|+++|||.||.+||+.|++|+||+ ++.+.+|+.||+++.+++-.++..+++
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 798888888664 245888999999999999999999999 999999999999999999999998875
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.83 E-value=1.7e-09 Score=111.47 Aligned_cols=148 Identities=11% Similarity=0.055 Sum_probs=105.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
+++|++.+.++.|++.|+++.++|+.....+..+.+++|+...... ....+++....... ........+..+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~a--n~~~~~~~~~~~~~------~~~~~~~~~~~k 146 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYC--NHASFDNDYIHIDW------PHSCKGTCSNQC 146 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEE--EEEECSSSBCEEEC------TTCCCTTCCSCC
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceee--eeEEEeCCcceecc------ccccccccccCC
Confidence 5789999999999999999999999999999999999988642110 00111111110000 000012345678
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHh-ccCccccCCChhHHHHHHHHHHHHHHhh
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE-NSDIIILDDNFASVVKVVRWGRSVFANI 794 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~-~adiil~~~~~~~i~~~i~~gR~~~~~i 794 (1023)
|..|..+++.++..++.|+|+||+.||.+|+++||+++|++ ...+.+++ ..++.. -++|+.+...+++-....+.|
T Consensus 147 ~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 147 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999998 55555444 444433 358999988887654444433
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.83 E-value=3.4e-09 Score=112.79 Aligned_cols=66 Identities=26% Similarity=0.327 Sum_probs=55.0
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCC-ChhHHHHHHH
Q 042091 719 DKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDD-NFASVVKVVR 785 (1023)
Q Consensus 719 ~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~-~~~~i~~~i~ 785 (1023)
.|...++.+.+. ...|+++|||.||.+||+.|++|+||+ ++.+.+|+.||+++..+ +-.++..+++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 677777776653 357999999999999999999999999 99999999999999754 4455767665
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.72 E-value=1.3e-08 Score=105.61 Aligned_cols=47 Identities=9% Similarity=-0.011 Sum_probs=41.1
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCC
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDA 681 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~ 681 (1023)
.+...+.++++|++|+++|+.+++.||++...+..+.+++|+.....
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i 61 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFI 61 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSCEE
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccccccc
Confidence 34456778999999999999999999999999999999999976443
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.70 E-value=2.7e-08 Score=99.99 Aligned_cols=130 Identities=15% Similarity=0.109 Sum_probs=95.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
+..++....++.+ +.+.+...+|+.............++...... ........ .........
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~--------------~~~~~~~~~ 130 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCH---KLEIDDSD--------------RVVGYQLRQ 130 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEE---EEEECTTS--------------CEEEEECCS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcc---eeeeeccc--------------ccccccccc
Confidence 4556666767665 57899999999999999999999998742210 00000000 012233455
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
+..+...++.++...+.|+|+|||.||.+||+.||+||||+ ...++.++++|++.. +++..++..+..
T Consensus 131 ~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred hhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 66777788888888999999999999999999999999996 777778888898876 478888877654
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.63 E-value=7e-09 Score=104.68 Aligned_cols=132 Identities=20% Similarity=0.169 Sum_probs=93.1
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++.+++.+.++.++..|..+.++||.....+....++.++..... .....+..... ......-.
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~~~~~~~~ 138 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA-----NRLIVKDGKLT----------GDVEGEVL 138 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE-----EEEEEETTEEE----------EEEECSSC
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhh-----hhhcccccccc----------cccccccc
Confidence 4788899999999999999999999999999999999988864211 00110000000 00000011
Q ss_pred CHhhHHHH----HHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHH
Q 042091 716 SPNDKLLL----VQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 716 ~P~~K~~i----V~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i 784 (1023)
.+..|... .+.++-..+.++++|||.||.+|++.|++|||| ++.+..++.||+++.++++..|+++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp STTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 22223333 333333355689999999999999999999999 57889999999999988888887654
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.54 E-value=3.5e-08 Score=102.71 Aligned_cols=144 Identities=14% Similarity=0.125 Sum_probs=96.6
Q ss_pred cHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--CCCCCeeeechhhhc---------cC-----------
Q 042091 641 GVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDA--EANDPNIIEGKVFRA---------LS----------- 698 (1023)
Q Consensus 641 ~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--~~~~~~vi~g~~~~~---------l~----------- 698 (1023)
+...++.++++.|+.+.++||++...+..+.+++++..+.. ..++..+...+.... ..
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 44556677789999999999999999999999999875421 122222222211100 00
Q ss_pred -------------------------H---HHHHHHHhhc----e--------EeccCCHhhHHHHHHHHHhC-C---CEE
Q 042091 699 -------------------------D---KEREKVAQEI----T--------VMGRSSPNDKLLLVQALRKG-G---DVV 734 (1023)
Q Consensus 699 -------------------------~---~~~~~~~~~~----~--------v~ar~~P~~K~~iV~~lq~~-g---~~V 734 (1023)
+ +++.+..... . +-.-....+|...++.+.+. | ..|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 0 1111111111 0 11112345899999888775 2 458
Q ss_pred EEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCc-------cccCCChhHHHHHHH
Q 042091 735 AVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI-------IILDDNFASVVKVVR 785 (1023)
Q Consensus 735 ~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adi-------il~~~~~~~i~~~i~ 785 (1023)
+++|||.||.+||+.|+.|++|+ ++.+..|+.||. +-..++..++.++++
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHH
Confidence 89999999999999999999999 999999998884 445556777877775
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.32 E-value=1.5e-06 Score=88.47 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=39.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILG 678 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~ 678 (1023)
.+.+.+++++++|+++|+.++++||++...+..+.+++|+..
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 467889999999999999999999999999999999999864
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.66 E-value=3.3e-05 Score=77.91 Aligned_cols=61 Identities=18% Similarity=0.335 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHH
Q 042091 718 NDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 718 ~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i 784 (1023)
.+|...++.|.++. .++++||+.||.+||+.|+.|+||+ .|.. +..|++.+.+ ...+..++
T Consensus 158 ~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~-~g~~--~~~A~~~~~~--~~ev~~~l 218 (229)
T d1u02a_ 158 VNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIK-VGEG--ETHAKFHVAD--YIEMRKIL 218 (229)
T ss_dssp CCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEE-ESSS--CCCCSEEESS--HHHHHHHH
T ss_pred CCHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEE-eCCC--CccCeEEcCC--HHHHHHHH
Confidence 48999999998875 4678899999999999997776665 3322 4678888863 44444444
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.61 E-value=1.8e-05 Score=80.49 Aligned_cols=54 Identities=19% Similarity=0.308 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHhC-CCEEEEEcC----CccCHHHhhhCC-ccEEecCCCCHHHHhccCccc
Q 042091 718 NDKLLLVQALRKG-GDVVAVTGD----GTNDAPALHEAD-IGLAMGIQGTEVAKENSDIII 772 (1023)
Q Consensus 718 ~~K~~iV~~lq~~-g~~V~~iGD----G~ND~~aL~~Ad-vgIamg~~g~~~ak~~adiil 772 (1023)
.+|...++.|.+. .+.|+++|| |.||.+||+.|+ .|+||+ ++.|.+|..+|+++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 4888888888764 568999999 569999999997 699999 99999999999886
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.46 E-value=9.8e-05 Score=74.75 Aligned_cols=126 Identities=18% Similarity=0.167 Sum_probs=84.2
Q ss_pred CCcccHHHHHHHHHhCC-CEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDAG-VKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aG-i~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
++-||+.++++.|++.| +++.++|+.....+..+.+..|+.... ..++.+.+... ..-
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f-----d~i~~~~~~~~----------------~k~ 149 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-----PFGAFADDALD----------------RNE 149 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-----SCEECTTTCSS----------------GGG
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc-----ccccccccccc----------------ccc
Confidence 45689999999999987 899999999999999999999997532 12332222100 001
Q ss_pred CHhhHHHHHHHHHh---CCCEEEEEcCCccCHHHhhhCCc---cEEecCCCCH-HHHhccCccccCCChhHHHHHHH
Q 042091 716 SPNDKLLLVQALRK---GGDVVAVTGDGTNDAPALHEADI---GLAMGIQGTE-VAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~---~g~~V~~iGDG~ND~~aL~~Adv---gIamg~~g~~-~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.|.--...++.+.. ..+.++||||+.+|..|-+.|++ +|+.|....+ ..+..+|+++. +++.+.+++.
T Consensus 150 ~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l~ 224 (228)
T d2hcfa1 150 LPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred hhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHHHHHH
Confidence 12222223333322 23579999999999999999994 4544522223 24456899986 7777777765
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.42 E-value=6.5e-05 Score=75.51 Aligned_cols=125 Identities=20% Similarity=0.268 Sum_probs=88.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.... ..++...+.. .....
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f-----~~~~~~~~~~----------------~~kp~ 153 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF-----SEMLGGQSLP----------------EIKPH 153 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-----SEEECTTTSS----------------SCTTS
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc-----cccccccccc----------------ccccc
Confidence 46899999999999999999999999999999999999997432 1222222211 12234
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEEec--CC-CCHHHHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI-GLAMG--IQ-GTEVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv-gIamg--~~-g~~~ak~~adiil~~~~~~~i~~~i 784 (1023)
|+--..+.+.++-....++|+||+.+|..+-+.|++ .|.+. .+ ..+.....+|+++. ++..+++++
T Consensus 154 p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ii 223 (224)
T d2hsza1 154 PAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKIT 223 (224)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGGT
T ss_pred chhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHHhh
Confidence 555555556666667789999999999999999987 33332 11 22345566898886 666665543
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.34 E-value=0.00018 Score=71.98 Aligned_cols=115 Identities=17% Similarity=0.220 Sum_probs=82.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.++++.|+++|+++.++|+.....+..+.+..|+...- ..++.+++.. .+.-.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F-----~~i~~~~~~~----------------~~Kp~ 146 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF-----DALASAEKLP----------------YSKPH 146 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEECTTSS----------------CCTTS
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccc-----cccccccccc----------------cchhh
Confidence 45799999999999999999999999999999999999997432 2445444431 12333
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCC----HHHHhccCcccc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGT----EVAKENSDIIIL 773 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~----~~ak~~adiil~ 773 (1023)
|+-=..+++.+.-..+.++|+||+.+|..|-+.|++.. ++.... +.....||+++.
T Consensus 147 ~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~-i~v~~~~~~~~~~~~~a~~~i~ 206 (218)
T d1te2a_ 147 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRS-IVVPAPEAQNDPRFVLANVKLS 206 (218)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEE-EECCCTTTTTCGGGGGSSEECS
T ss_pred HHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEE-EEECCCCCccchhhcCCCEEEC
Confidence 44445556666555678999999999999999999743 222222 222346788776
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.16 E-value=0.00047 Score=70.88 Aligned_cols=126 Identities=18% Similarity=0.203 Sum_probs=88.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+++|+++.++||.+...+..+-+..|+..... ..++.+++.. .....
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~----d~~~~~d~~~----------------~~KP~ 158 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP----DFLVTPDDVP----------------AGRPY 158 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC----SCCBCGGGSS----------------CCTTS
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccc----cccccccccc----------------ccccC
Confidence 578999999999999999999999999999999999999864211 2334444321 12334
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCcc-EEecCCCC------H---------------------HHHhc
Q 042091 717 PNDKLLLVQALRKG-GDVVAVTGDGTNDAPALHEADIG-LAMGIQGT------E---------------------VAKEN 767 (1023)
Q Consensus 717 P~~K~~iV~~lq~~-g~~V~~iGDG~ND~~aL~~Advg-Iamg~~g~------~---------------------~ak~~ 767 (1023)
|+.=...++.+.-. .+.++||||+.+|..+=+.|++- |++. .|. + ..+..
T Consensus 159 p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 237 (257)
T d1swva_ 159 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI-LGSSELGLTEEEVENMDSVELREKIEVVRNRFVENG 237 (257)
T ss_dssp SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC-TTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEc-cCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCC
Confidence 55555566666543 46799999999999999999963 3333 232 1 01123
Q ss_pred cCccccCCChhHHHHHHH
Q 042091 768 SDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 768 adiil~~~~~~~i~~~i~ 785 (1023)
||+++. ++..+..+|+
T Consensus 238 ad~vi~--~l~eL~~ii~ 253 (257)
T d1swva_ 238 AHFTIE--TMQELESVME 253 (257)
T ss_dssp CSEEES--SGGGHHHHHH
T ss_pred CCEEEC--CHHHHHHHHH
Confidence 899987 6777777765
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.13 E-value=0.00027 Score=74.12 Aligned_cols=134 Identities=12% Similarity=0.138 Sum_probs=80.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCC-CCCeeeechhhhccCHHHHHHHHhhceEec-c
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEA-NDPNIIEGKVFRALSDKEREKVAQEITVMG-R 714 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~-~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a-r 714 (1023)
++|+|+++.++.|++.|+.+.++||--...+.++++++|+..++... ......++..+.. .+-. -
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~-------------~~~~~~ 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLK-------------GFKGEL 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEE-------------EECSSC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEe-------------eccCCc
Confidence 58999999999999999999999999999999999999997542100 0000011110000 0000 0
Q ss_pred CCHhhHHHHH----HHHHh--CCCEEEEEcCCccCHHHhhh---CCccEEecC-CCC-H----HHHhccCccccCCChhH
Q 042091 715 SSPNDKLLLV----QALRK--GGDVVAVTGDGTNDAPALHE---ADIGLAMGI-QGT-E----VAKENSDIIILDDNFAS 779 (1023)
Q Consensus 715 ~~P~~K~~iV----~~lq~--~g~~V~~iGDG~ND~~aL~~---AdvgIamg~-~g~-~----~ak~~adiil~~~~~~~ 779 (1023)
.....|...+ ...+. ....|.++|||.||..|.+. ++..++.|- +.. + .-.++-|+|+.+|.--.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~ 281 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 281 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCH
T ss_pred cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChh
Confidence 1122222222 22222 35679999999999999874 344444441 222 1 13367899988775444
Q ss_pred HHHH
Q 042091 780 VVKV 783 (1023)
Q Consensus 780 i~~~ 783 (1023)
++..
T Consensus 282 v~~~ 285 (291)
T d2bdua1 282 VVNS 285 (291)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.97 E-value=0.00024 Score=70.62 Aligned_cols=122 Identities=16% Similarity=0.092 Sum_probs=84.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.+++.+.++.++..| ++.++|+.....+..+.+.+|+.... ..++.+... ....
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f-----d~v~~~~~~------------------~~~~ 139 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF-----DGIYGSSPE------------------APHK 139 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC-----SEEEEECSS------------------CCSH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc-----ccccccccc------------------cccc
Confidence 56799999999999875 89999999999999999999998532 233333322 2334
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEEe--cCCCCHH-HHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI-GLAM--GIQGTEV-AKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv-gIam--g~~g~~~-ak~~adiil~~~~~~~i~~~i 784 (1023)
|+--..+++.++-..+.++||||+.||..|-+.|++ .|++ |....+. ....+|+++. ++..+...+
T Consensus 140 p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~~~l 209 (210)
T d2ah5a1 140 ADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAYF 209 (210)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHHT
T ss_pred ccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHHh
Confidence 444444444444445679999999999999999997 3333 4222232 3345899876 566666543
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.96 E-value=0.0004 Score=64.37 Aligned_cols=108 Identities=18% Similarity=0.275 Sum_probs=73.0
Q ss_pred ecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccc
Q 042091 505 VSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQ 584 (1023)
Q Consensus 505 ~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~ 584 (1023)
.|.||+.+|++++|++.+...... ....-....||....+..++.+ ++. .+..|++..+.+.... .|.
T Consensus 28 ~SeHPlakAIv~~Ak~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~--~g~---~v~~G~~~~~~~~~~~----~g~-- 95 (136)
T d2a29a1 28 ADETPEGRSIVILAKQRFNLRERD-VQSLHATFVPFTAQSRMSGINI--DNR---MIRKGSVDAIRRHVEA----NGG-- 95 (136)
T ss_dssp TCCSHHHHHHHHHHHHHHCCCCCC-TTTTTCEEEEEETTTTEEEEEE--TTE---EEEEECHHHHHHHHHH----HTC--
T ss_pred CCCchHHHHHHHHHHHhcCCCccc-cccccccccccccccceEEEEE--CCE---EEEecHHHHHHHHHHH----cCC--
Confidence 467999999999998765332211 1222334566766665554432 232 3456999877665432 111
Q ss_pred cCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCc
Q 042091 585 SIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCR 639 (1023)
Q Consensus 585 ~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr 639 (1023)
.++ +.+.+.+++++.+|..++.+| .|..++|++++.|++|
T Consensus 96 ~~~---~~~~~~~~~~~~~G~Tvv~Va------------~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 96 HFP---TDVDQKVDQVARQGATPLVVV------------EGSRVLGVIALKDIVK 135 (136)
T ss_dssp CCC---HHHHHHHHHHHHTTSEEEEEE------------ETTEEEEEEEEEESSC
T ss_pred CCc---HHHHHHHHHHHHCCCeEEEEE------------ECCEEEEEEEEEeecC
Confidence 111 567888999999999999999 6789999999999986
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.86 E-value=0.0022 Score=64.46 Aligned_cols=126 Identities=17% Similarity=0.150 Sum_probs=85.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+ +|+++.++|+........+.+.+|+.... ..++...+.. ...-.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f-----d~i~~s~~~~----------------~~KP~ 157 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF-----DSITTSEEAG----------------FFKPH 157 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC-----SEEEEHHHHT----------------BCTTS
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccc-----cccccccccc----------------ccchh
Confidence 56899999999997 58999999999999999999999997421 2333333321 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCC-ccCHHHhhhCCccEEe-cC-CCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDG-TNDAPALHEADIGLAM-GI-QGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG-~ND~~aL~~AdvgIam-g~-~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
|+-=..+++.+.-....++|+||. .+|..+-+.|++-... .. .......+.+|+++. +++.+.+++++
T Consensus 158 ~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~~ 228 (230)
T d1x42a1 158 PRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVDE 228 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEES--STTHHHHHHHH
T ss_pred hHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEEC--CHHHHHHHHHH
Confidence 322233344443344569999997 6899998889875322 10 222334567899887 78888888863
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.36 E-value=0.0059 Score=59.07 Aligned_cols=135 Identities=16% Similarity=0.120 Sum_probs=77.3
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHH---------------HHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHH
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQT---------------AKAIALECGILGSDAEANDPNIIEGKVFRALSDKER 702 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---------------a~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~ 702 (1023)
+-|++.++++.|+++|+++.++|...... ........|+..... ..+....+-. .
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~cp~~p~~~-~----- 97 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGI----YYCPHHPQGS-V----- 97 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEE----EEECCBTTCS-S-----
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccce----eecccccccc-c-----
Confidence 45899999999999999999999876321 111112222221000 0000000000 0
Q ss_pred HHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc--EEe--cCCCCHHHHhccCccccCCChh
Q 042091 703 EKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG--LAM--GIQGTEVAKENSDIIILDDNFA 778 (1023)
Q Consensus 703 ~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg--Iam--g~~g~~~ak~~adiil~~~~~~ 778 (1023)
........+..-.|.-=..+++.+.-.-+.+.||||..+|..|=+.|+++ +.+ |....+.....||+++. ++.
T Consensus 98 -~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~--~l~ 174 (182)
T d2gmwa1 98 -EEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLA 174 (182)
T ss_dssp -GGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGG
T ss_pred -ccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEEC--CHH
Confidence 00000001123344444555666655556789999999999999999985 333 21223456667999987 788
Q ss_pred HHHHHHH
Q 042091 779 SVVKVVR 785 (1023)
Q Consensus 779 ~i~~~i~ 785 (1023)
.++++|+
T Consensus 175 dl~~~ik 181 (182)
T d2gmwa1 175 DLPQAIK 181 (182)
T ss_dssp GHHHHHH
T ss_pred HHHHHhc
Confidence 8888775
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.31 E-value=0.0017 Score=63.93 Aligned_cols=119 Identities=17% Similarity=0.211 Sum_probs=78.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+++|+++.++|+... .+..+-+..|+...- ..++..++.. ...-.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f-----~~i~~s~~~~----------------~~Kp~ 139 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF-----TEILTSQSGF----------------VRKPS 139 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE-----EEEECGGGCC----------------CCTTS
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc-----cccccccccc----------------ccchh
Confidence 4679999999999999999999998654 566778889987531 1233222211 12334
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE-EecCCCCHHHHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL-AMGIQGTEVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI-amg~~g~~~ak~~adiil~~~~~~~i~~~i 784 (1023)
|+-=..+++.+.-..+.++||||+.+|..+-+.|++.. .+. .+.. .+|..+. ++..+..++
T Consensus 140 ~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~~----~~~~~~~--~~~dl~~l~ 201 (204)
T d2go7a1 140 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-ESTY----EGNHRIQ--ALADISRIF 201 (204)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCSC----TTEEECS--STTHHHHHT
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc-CCCC----CcCeecC--CHHHHHHHh
Confidence 55555556666555678999999999999999999853 343 3432 3444443 455554443
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.25 E-value=0.0008 Score=66.61 Aligned_cols=120 Identities=10% Similarity=0.136 Sum_probs=81.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|++ ++++.++|+.....+..+.++.|+.... ..++.+.+.. ...-.
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 139 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM-----AVTISADDTP----------------KRKPD 139 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE-----EEEECGGGSS----------------CCTTS
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccccc-----cccccccccc----------------cchhh
Confidence 466899999999975 7999999999999999999999987421 1233332221 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe---cCCCCHHHHhccCccccCCChhHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM---GIQGTEVAKENSDIIILDDNFASVV 781 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIam---g~~g~~~ak~~adiil~~~~~~~i~ 781 (1023)
|+--..+++.++-..+.++||||+.+|..+-++|++.... | .......+.+|.++. ++..++
T Consensus 140 p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 140 PLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGGG
T ss_pred hhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeC--CHHHHH
Confidence 4444555555544446789999999999999999887553 3 333344566787774 454443
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.00 E-value=0.0087 Score=59.94 Aligned_cols=117 Identities=17% Similarity=0.095 Sum_probs=80.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
.+.||+.+.++.|+++|+++.++|+............+|+..-... .....++. ....-.
T Consensus 127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~----~~~~~d~~----------------~~~KP~ 186 (253)
T d1zs9a1 127 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL----VDGHFDTK----------------IGHKVE 186 (253)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG----CSEEECGG----------------GCCTTC
T ss_pred ccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhh----cceeeccc----------------cccCCC
Confidence 5789999999999999999999999999999999999998642110 00000110 012334
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe----cCCCCHHHHhccCcccc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM----GIQGTEVAKENSDIIIL 773 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIam----g~~g~~~ak~~adiil~ 773 (1023)
|+-=....+.+.-..+.++||||..+|+.+-++|++-... |..........++.++.
T Consensus 187 p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 187 SESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred cHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 4444555555555567899999999999999999986554 32223334455666665
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.86 E-value=0.0054 Score=58.22 Aligned_cols=92 Identities=11% Similarity=-0.004 Sum_probs=64.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCC-HHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDN-LQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~-~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
++.|++.++++.|+++|+++.++|+-+ ...+..+-+..++..... .+ .....-
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~-----~~---------------------~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI-----QR---------------------EIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS-----EE---------------------EESSSC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce-----ee---------------------ecccCC
Confidence 578999999999999999999999655 456666777777753211 00 011122
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
.|+.-..+.+.+.-..+.++|+||..+|..+-+.|++-.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~ 138 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTC 138 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred ChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEE
Confidence 334444455555555678999999999999999998733
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.77 E-value=0.011 Score=57.06 Aligned_cols=109 Identities=18% Similarity=0.111 Sum_probs=73.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|++.|+++.++|+-..... .+-+.+|+...- ..++.+++.. ...-.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~f-----d~i~~~~~~~----------------~~KP~ 136 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYF-----TEVVTSSSGF----------------KRKPN 136 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGE-----EEEECGGGCC----------------CCTTS
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccc-----cccccccccc----------------ccCCC
Confidence 5679999999999999999999999766554 567888887421 1233333321 01222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI 770 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adi 770 (1023)
|+--..+.+.+. -+.+++|||..+|..+-++|++-...= ++.+..++.-|+
T Consensus 137 p~~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v-~~~~~~~~~~d~ 187 (187)
T d2fi1a1 137 PESMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLDI 187 (187)
T ss_dssp CHHHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHTC
T ss_pred HHHHHHHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEEEE-CCCCChHhhcCC
Confidence 333334444443 234899999999999999998875443 666666666554
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.61 E-value=0.0022 Score=59.69 Aligned_cols=98 Identities=17% Similarity=0.085 Sum_probs=61.7
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHH--hhceEe
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVA--QEITVM 712 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~--~~~~v~ 712 (1023)
+|++.|++.+.++.|+++|++++++||.+......+.+.++.. ........ .....+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~---------------------~~~~~~~~~~~~~~~~ 92 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMT---------------------RKWVEDIAGVPLVMQC 92 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHH---------------------HHHHHHTTCCCCSEEE
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHH---------------------hhhhhhcCCCcEEEee
Confidence 5789999999999999999999999998743221111111000 00000000 000011
Q ss_pred ------ccCCHhhHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCcc
Q 042091 713 ------GRSSPNDKLLLVQALRKGG-DVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 713 ------ar~~P~~K~~iV~~lq~~g-~~V~~iGDG~ND~~aL~~Advg 753 (1023)
.|..+.-|..+.+.+...+ .+++|+||...|+.|.+++++-
T Consensus 93 ~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 93 QREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp ECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred cccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 2334567788887776654 4568899999999999999875
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.61 E-value=0.0011 Score=66.76 Aligned_cols=49 Identities=18% Similarity=0.314 Sum_probs=34.4
Q ss_pred hHHHHHHHHHhC-CCEEEEEcC----CccCHHHhhhCC-ccEEecCCCCHHHHhccC
Q 042091 719 DKLLLVQALRKG-GDVVAVTGD----GTNDAPALHEAD-IGLAMGIQGTEVAKENSD 769 (1023)
Q Consensus 719 ~K~~iV~~lq~~-g~~V~~iGD----G~ND~~aL~~Ad-vgIamg~~g~~~ak~~ad 769 (1023)
+|...++.|.+. .+.|+++|| |.||.+||+.|+ .|++++ +. +..++.++
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~-~~~~~~~~ 239 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-AP-EDTRRICE 239 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SH-HHHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CH-HHHHHHHH
Confidence 676666666543 578999999 789999999997 688776 44 44455444
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.43 E-value=0.02 Score=57.57 Aligned_cols=124 Identities=13% Similarity=0.095 Sum_probs=82.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+ .|+++.++|+.........-+.+|+.... ..++.+.+.. .+.-+
T Consensus 109 ~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f-----d~i~~s~~~~----------------~~KP~ 166 (247)
T d2gfha1 109 ILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYF-----DAIVIGGEQK----------------EEKPA 166 (247)
T ss_dssp CCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGC-----SEEEEGGGSS----------------SCTTC
T ss_pred ccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccc-----cccccccccc----------------cchhh
Confidence 46799999999998 58999999999999999999999987532 1233333321 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCcc-EEecCCCC----HHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIG-LAMGIQGT----EVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~Advg-Iamg~~g~----~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+-=..+++.+.-..+.++||||.. +|..+-+.|++. +..- ++. ......+|+++. ++..+..+++
T Consensus 167 p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~-~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~ 238 (247)
T d2gfha1 167 PSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWI-NKSGRVPLTSSPMPHYMVS--SVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEE-CTTCCCCSSCCCCCSEEES--SGGGHHHHHH
T ss_pred hhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEE-CCCCCCcccccCCCCEEEC--CHHHHHHHHH
Confidence 3222333444443445699999995 899999999996 4321 211 112344688887 6788888775
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.84 E-value=0.013 Score=59.47 Aligned_cols=35 Identities=17% Similarity=0.254 Sum_probs=30.7
Q ss_pred ccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHc
Q 042091 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALEC 674 (1023)
Q Consensus 640 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~ 674 (1023)
+++.++|+.|+++|++++++|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78999999999999999999998877777776654
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.76 E-value=0.054 Score=52.98 Aligned_cols=144 Identities=22% Similarity=0.310 Sum_probs=91.3
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--C--CCCCeeeech---------hhhccCHHHHHH
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDA--E--ANDPNIIEGK---------VFRALSDKEREK 704 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--~--~~~~~vi~g~---------~~~~l~~~~~~~ 704 (1023)
+-||+.++++.+++. ...+++|-.-.+-..++|+.+|+....- . .+...+-.|+ .+...+.+++.+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e 160 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFR 160 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHH
Confidence 568999999999877 6788888889999999999999962100 0 0000010010 001111122222
Q ss_pred -------------HHhhceEeccCCHhhHHHHHHHHHhC--CCEEEEEcCCccCHHHhhhCCc--cEEecCCCCHHHHhc
Q 042091 705 -------------VAQEITVMGRSSPNDKLLLVQALRKG--GDVVAVTGDGTNDAPALHEADI--GLAMGIQGTEVAKEN 767 (1023)
Q Consensus 705 -------------~~~~~~v~ar~~P~~K~~iV~~lq~~--g~~V~~iGDG~ND~~aL~~Adv--gIamg~~g~~~ak~~ 767 (1023)
++..+.... -..|..+++..-.. -...+++||++.|..||+.|.= |+|+.=+|.+-+-..
T Consensus 161 ~~d~~f~~~e~~~i~e~Vk~VG---gg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~e 237 (308)
T d1y8aa1 161 KLDELFSRSEVRKIVESVKAVG---AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKH 237 (308)
T ss_dssp HHHHHHHSHHHHHHHHTCBCCC---HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTT
T ss_pred HHHHHhccchHhhHHhhhcccC---CchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccc
Confidence 222222221 24566666554432 2234899999999999988732 555555899999999
Q ss_pred cCccccCCChhHHHHHHH
Q 042091 768 SDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 768 adiil~~~~~~~i~~~i~ 785 (1023)
||+.+.+.+-..+..++.
T Consensus 238 A~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 238 ADVVIISPTAMSEAKVIE 255 (308)
T ss_dssp CSEEEECSSTHHHHHHHH
T ss_pred cceEEeccchhHHHHHHH
Confidence 999999988887777765
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.25 E-value=0.04 Score=53.95 Aligned_cols=124 Identities=14% Similarity=0.115 Sum_probs=84.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
.+.+++.++++.+++.|+++.++|+-.......+-+..++.... ..++...+.. ...-.
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f-----d~~~~s~~~~----------------~~KP~ 151 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF-----DHLLSVDPVQ----------------VYKPD 151 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEESGGGT----------------CCTTS
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc-----cceeeeeeee----------------ccccH
Confidence 46789999999999999999999999999999999988887532 2333333321 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecC---CCCHHHHhccCccccCCChhHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGI---QGTEVAKENSDIIILDDNFASVVKV 783 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~---~g~~~ak~~adiil~~~~~~~i~~~ 783 (1023)
|+-=..+++.+.-..+.++||||..+|+-+=++|++--..-. ...+.....+|+++. ++..+.++
T Consensus 152 p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~l 219 (220)
T d1zrna_ 152 NRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVEL 219 (220)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTT
T ss_pred HHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHHhh
Confidence 333344455554455679999999999999999997754321 122223345788885 67766543
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.97 E-value=0.019 Score=56.11 Aligned_cols=90 Identities=21% Similarity=0.313 Sum_probs=63.1
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCH----HHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNL----QTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~----~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a 713 (1023)
+.|++.+.++.+++.|++|+.+||+.. .|++.+.+.+|+..... ..+.+.+.+
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~---~~vll~~~~-------------------- 143 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNM---NPVIFAGDK-------------------- 143 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTB---CCCEECCCC--------------------
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccc---cceEeeCCC--------------------
Confidence 567999999999999999999999854 46777777889864321 111111111
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEE
Q 042091 714 RSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI-GLA 755 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv-gIa 755 (1023)
.....|.+.|+ ++ .+++++||..+|..+-.+|++ +|.
T Consensus 144 -~~K~~rr~~Ik---~y-~I~l~~GD~l~Df~aA~eagi~~iR 181 (209)
T d2b82a1 144 -PGQNTKSQWLQ---DK-NIRIFYGDSDNDITAARDVGARGIR 181 (209)
T ss_dssp -TTCCCSHHHHH---HT-TEEEEEESSHHHHHHHHHTTCEEEE
T ss_pred -CCchHHHHHHH---Hc-CeEEEecCCHHHHhHHHHcCCCceE
Confidence 12244655554 33 589999999999999999985 443
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=93.83 E-value=0.14 Score=51.60 Aligned_cols=61 Identities=21% Similarity=0.293 Sum_probs=41.4
Q ss_pred HHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCc-cEEecCCC--C-HHHHh---ccCccccCCChhHHHHHH
Q 042091 721 LLLVQALRKGGDVVAVTGDGT-NDAPALHEADI-GLAMGIQG--T-EVAKE---NSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 721 ~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~Adv-gIamg~~g--~-~~ak~---~adiil~~~~~~~i~~~i 784 (1023)
..+.+.+.-..+.++||||.. +|..+-+.|++ +|.+. +| + +.... ..|+++. ++..+.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~-~G~~~~~~~~~~~~~PD~ii~--~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVL-TGETTPEDLERAETKPDFVFK--NLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEES-SSSCCHHHHHHCSSCCSEEES--SHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEEC-CCCCCHHHHhhcCCCCCEEEC--CHHHHHHHh
Confidence 445555544567899999995 69999999997 55553 33 2 22222 2488887 788887776
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=93.62 E-value=0.031 Score=54.99 Aligned_cols=112 Identities=12% Similarity=0.155 Sum_probs=72.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++-||+.+.++.|++.|+++.++|+... +...-+..|+.... ..++.+.+.. ...-
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~KP 146 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF-----DAIADPAEVA----------------ASKP 146 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC-----SEECCTTTSS----------------SCTT
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccc-----cccccccccc----------------cccc
Confidence 45788999999999999999999999754 56778888887532 2333333321 1222
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEEecCCCCHHHHhccCcccc
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI-GLAMGIQGTEVAKENSDIIIL 773 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv-gIamg~~g~~~ak~~adiil~ 773 (1023)
.|+-=....+.+.-..+.++||||..+|..+-+.|++ .|.++ . ......++.++.
T Consensus 147 ~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~-~--~~~~~~~~~~~~ 202 (221)
T d1o08a_ 147 APDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG-R--PEDLGDDIVIVP 202 (221)
T ss_dssp STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-C--HHHHCSSSEEES
T ss_pred ChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEEC-C--hhhcccccEEcC
Confidence 2322233333333345668999999999999999987 44443 2 223334555443
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.50 E-value=0.058 Score=52.75 Aligned_cols=105 Identities=13% Similarity=0.139 Sum_probs=71.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECC----CCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTG----DNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTG----D~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
.++|++.+.++.|+++|+++.++|+ .............|+.... ..++.+++.. .
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f-----d~i~~s~~~~----------------~ 155 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF-----DFLIESCQVG----------------M 155 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC-----SEEEEHHHHS----------------C
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh-----ceeeehhhcc----------------C
Confidence 4679999999999999999999996 3333445555666665321 2344433321 1
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEEecCCCCHH
Q 042091 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI-GLAMGIQGTEV 763 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv-gIamg~~g~~~ 763 (1023)
..-.|+--...++.++-..+.++||||..+|+.+-+.|++ +|-+. ++.+.
T Consensus 156 ~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~ 206 (222)
T d1cr6a1 156 IKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVH-NTASA 206 (222)
T ss_dssp CTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHH
T ss_pred CCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEEC-CcchH
Confidence 2345666666677776666779999999999999999997 44443 44443
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.39 E-value=0.12 Score=50.52 Aligned_cols=125 Identities=15% Similarity=0.157 Sum_probs=80.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
.+.+++.+.++.|+.. ..++|+-....+..+-+.+|+..... ..+..++.... -.+...
T Consensus 85 ~~~~g~~~~L~~l~~~---~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~--------------~~~KP~ 143 (222)
T d2fdra1 85 KIIDGVKFALSRLTTP---RCICSNSSSHRLDMMLTKVGLKPYFA----PHIYSAKDLGA--------------DRVKPK 143 (222)
T ss_dssp CBCTTHHHHHHHCCSC---EEEEESSCHHHHHHHHHHTTCGGGTT----TCEEEHHHHCT--------------TCCTTS
T ss_pred chhhhHHHHhhhcccc---ceeeeecchhhhhhhhcccccccccc----eeecccccccc--------------cccccC
Confidence 4778888888877654 56899999999999999999985321 23333332210 011222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecCCCC--------HHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMGIQGT--------EVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg~~g~--------~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+-=....+.+.-..+.++||||+.+|..+=+.|++- |.+. .+. +.....+|+++. ++..+..++.
T Consensus 144 ~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~--~l~eL~~ll~ 218 (222)
T d2fdra1 144 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQDLPAVIA 218 (222)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHHH
T ss_pred HHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEEC--CHHHHHHHHH
Confidence 3333444455544456799999999999999999973 3333 221 113345899997 6677766664
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=90.98 E-value=0.29 Score=49.01 Aligned_cols=44 Identities=18% Similarity=0.071 Sum_probs=33.0
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCcc-CHHHhhhCCc-cEEec
Q 042091 714 RSSPNDKLLLVQALRKGGDVVAVTGDGTN-DAPALHEADI-GLAMG 757 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~g~~V~~iGDG~N-D~~aL~~Adv-gIamg 757 (1023)
.-+|+--..+.+.++-..+.++||||..+ |..+-++|++ +|.+.
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred cCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC
Confidence 34455555666666656678999999976 9999999998 66664
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=90.94 E-value=0.14 Score=44.84 Aligned_cols=88 Identities=17% Similarity=0.283 Sum_probs=59.1
Q ss_pred ecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccc
Q 042091 505 VSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQ 584 (1023)
Q Consensus 505 ~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~ 584 (1023)
.|.||+.+|+++++++.+.......+ .... ...|+.. ..+.+ |+++.+-+..-.
T Consensus 25 ~S~HPlA~AIv~~a~~~~~~~~~~~~----~~~~------~G~Gi~g----~~v~v---G~~~~~~~~~~~--------- 78 (113)
T d2b8ea2 25 RSEHPIAEAIVKKALEHGIELGEPEK----VEVI------AGEGVVA----DGILV---GNKRLMEDFGVA--------- 78 (113)
T ss_dssp TCCSHHHHHHHHHHHTTTCCCCCCSC----EEEE------TTTEEEE----TTEEE---ECHHHHHHTTCC---------
T ss_pred cCCCchHHHHHHHHHHhcCCCCcccc----ceee------ccceEEe----EEEEE---CcHHHHHhcCCC---------
Confidence 46899999999999987765443221 1111 1224432 23444 998887654221
Q ss_pred cCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeec
Q 042091 585 SIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGI 634 (1023)
Q Consensus 585 ~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~ 634 (1023)
++ +.+.+.++++..+|..++.++ .|..++|++++
T Consensus 79 -~~---~~~~~~~~~~~~~G~T~v~va------------~d~~~~G~ial 112 (113)
T d2b8ea2 79 -VS---NEVELALEKLEREAKTAVIVA------------RNGRVEGIIAV 112 (113)
T ss_dssp -CC---HHHHHHHHHHHTTTCEEEEEE------------ETTEEEEEEEE
T ss_pred -CC---HHHHHHHHHHHhCCCeEEEEE------------ECCEEEEEEEE
Confidence 11 467788899999999999999 67789999986
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=90.32 E-value=0.11 Score=50.89 Aligned_cols=41 Identities=17% Similarity=0.021 Sum_probs=29.0
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEEec
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI-GLAMG 757 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv-gIamg 757 (1023)
|.--.++.+.+.-.-+.+.||||..+|..+=+.|++ +|.+.
T Consensus 132 p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 132 PGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp CHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred chhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence 333344445554445678999999999999999998 45553
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.32 E-value=0.15 Score=49.36 Aligned_cols=100 Identities=15% Similarity=0.158 Sum_probs=62.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHH----HHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKA----IALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~----ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
++.+++.++++.|++.|+++.++|......... .-...++... ...++.+.+.. .
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~-----fd~i~~s~~~~----------------~ 157 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-----FDFLIESCQVG----------------M 157 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-----SSEEEEHHHHT----------------C
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh-----ccEEEeccccc----------------c
Confidence 467899999999999999999999754443222 2223333321 11333333221 1
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEEec
Q 042091 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI-GLAMG 757 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv-gIamg 757 (1023)
..-+|+-=..+++.+.-....++||||...|+.+-++|++ +|.+.
T Consensus 158 ~KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 158 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred chhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 2233444344555555444668899999999999999998 55443
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=90.23 E-value=0.56 Score=45.94 Aligned_cols=124 Identities=15% Similarity=0.174 Sum_probs=81.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.+++.+++++|+ |+.+.++|..+...+..+-+..|+.... ..++.+.+... +.-.
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f-----d~v~~s~~~~~----------------~KP~ 149 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF-----DAVISVDAKRV----------------FKPH 149 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEEGGGGTC----------------CTTS
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc-----ccccccccccc----------------cCcc
Confidence 56788999999886 7889999999999999998999887532 24555544321 1222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE-ecCCCCHH-------------------------HHhccCc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA-MGIQGTEV-------------------------AKENSDI 770 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa-mg~~g~~~-------------------------ak~~adi 770 (1023)
|+-=...++.+.-+.+.+++|||..+|..+=+.|++--. +...+.+. .....|+
T Consensus 150 p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~ 229 (245)
T d1qq5a_ 150 PDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDF 229 (245)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSE
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCE
Confidence 322233444444444569999999999999888886422 21011100 0124788
Q ss_pred cccCCChhHHHHHHH
Q 042091 771 IILDDNFASVVKVVR 785 (1023)
Q Consensus 771 il~~~~~~~i~~~i~ 785 (1023)
++. ++..+..+|+
T Consensus 230 ~i~--~l~el~~lv~ 242 (245)
T d1qq5a_ 230 VVP--ALGDLPRLVR 242 (245)
T ss_dssp EES--SGGGHHHHHH
T ss_pred EEC--CHHHHHHHHH
Confidence 886 7888888876
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=89.86 E-value=0.29 Score=48.94 Aligned_cols=39 Identities=18% Similarity=0.160 Sum_probs=29.6
Q ss_pred ccHHHHHHHHHhCCCEEEEECCCC---HHHHHHHHHHcCCCC
Q 042091 640 PGVKDAVKLCRDAGVKVRMVTGDN---LQTAKAIALECGILG 678 (1023)
Q Consensus 640 ~~~~~~I~~l~~aGi~v~mlTGD~---~~ta~~ia~~~gi~~ 678 (1023)
|++.++|+.|+++|++++++|+.. +......-+++|+.-
T Consensus 22 ~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~ 63 (250)
T d2c4na1 22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 63 (250)
T ss_dssp TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCC
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccc
Confidence 789999999999999999998544 444444445678754
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=83.74 E-value=0.17 Score=47.26 Aligned_cols=26 Identities=31% Similarity=0.446 Sum_probs=23.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGD 662 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD 662 (1023)
.+-|++.++++.|+++|+++.++|.-
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 45689999999999999999999974
|