Citrus Sinensis ID: 042117

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120--
Protein Sequence
MSVQDVYLNCSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MSVQDVYLNCSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKfltwfpmyyhlKFSFLIWLqlpstdgaRQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK
Flexible Loop (DISEMBL)
MSVQDVYLNCSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATThakfdqltaitqak
Low Complexity Region (SEG)
MSVQDVYLNCSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK
Disordered region (IsUnstruct)
****DVYLNCSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKF**********
Disordered Region (DISOPRED)
*SVQDVYLNCSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKAT**A************
Disordered Region (DISEMBL)
MSVQDVYLNCSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK
Disordered Region (DISPRO)
*SVQDVYLNCSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQ**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSVQDVYLNCSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	122	2.2.26 [Sep-21-2011]
Q6NLY8	200	HVA22-like protein k OS=A	yes	no	0.926	0.565	0.557	5e-38
Q5RE33	189	Receptor expression-enhan	yes	no	0.762	0.492	0.446	3e-20
Q00765	189	Receptor expression-enhan	yes	no	0.762	0.492	0.446	4e-20
B2RZ37	189	Receptor expression-enhan	yes	no	0.762	0.492	0.446	4e-20
Q60870	185	Receptor expression-enhan	yes	no	0.762	0.502	0.446	7e-20
Q29RM3	189	Receptor expression-enhan	yes	no	0.762	0.492	0.436	1e-19
Q4QQW1	257	Receptor expression-enhan	no	no	0.737	0.350	0.4	1e-16
Q8K072	257	Receptor expression-enhan	no	no	0.737	0.350	0.4	2e-16
Q5R598	257	Receptor expression-enhan	no	no	0.737	0.350	0.388	2e-16
Q9H6H4	257	Receptor expression-enhan	no	no	0.737	0.350	0.388	2e-16

>sp|Q6NLY8|HA22K_ARATH HVA22-like protein k OS=Arabidopsis thaliana GN=HVA22K PE=2 SV=1

 Score =  155 bits (393), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 63/113 (55%), Positives = 88/113 (77%)

Query: 10  CSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFS 69
           CS+G+ LPVYSTFKAIE  DE+EQQK L+YWAAYG+FS+ EVF DK ++WFP+YYH+KF+
Sbjct: 42  CSIGIGLPVYSTFKAIESGDENEQQKMLIYWAAYGSFSLVEVFTDKIISWFPLYYHVKFA 101

Query: 70  FLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK 122
           FL+WLQLP+ +G++Q+Y N + PFLLR QA+ D+L    + +  ++    Q +
Sbjct: 102 FLVWLQLPTVEGSKQIYNNQIRPFLLRHQARVDQLVDGVYGEMVKVVRSHQGE 154

Arabidopsis thaliana (taxid: 3702)

>sp|Q5RE33|REEP5_PONAB Receptor expression-enhancing protein 5 OS=Pongo abelii GN=REEP5 PE=2 SV=1

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 1/94 (1%)

Query: 12  VGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFL 71
           +G   P Y + KAIE  ++++  +WL YW  YG FSIAE F+D FL+WFP YY LK  FL
Sbjct: 62  IGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYMLKCGFL 121

Query: 72  IWLQLPS-TDGARQLYENYLSPFLLRCQAKADKL 104
           +W   PS ++GA  LY+  + PF L+ +++ D +
Sbjct: 122 LWCMAPSPSNGAELLYKRIIRPFFLKHESQVDSV 155

May promote functional cell surface expression of olfactory receptors.

Pongo abelii (taxid: 9601)

>sp|Q00765|REEP5_HUMAN Receptor expression-enhancing protein 5 OS=Homo sapiens GN=REEP5 PE=1 SV=3

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 1/94 (1%)

Query: 12  VGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFL 71
           +G   P Y + KAIE  ++++  +WL YW  YG FSIAE F+D FL+WFP YY LK  FL
Sbjct: 62  IGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYMLKCGFL 121

Query: 72  IWLQLPS-TDGARQLYENYLSPFLLRCQAKADKL 104
           +W   PS ++GA  LY+  + PF L+ +++ D +
Sbjct: 122 LWCMAPSPSNGAELLYKRIIRPFFLKHESQMDSV 155

May promote functional cell surface expression of olfactory receptors.

Homo sapiens (taxid: 9606)

>sp|B2RZ37|REEP5_RAT Receptor expression-enhancing protein 5 OS=Rattus norvegicus GN=Reep5 PE=1 SV=1

 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 1/94 (1%)

Query: 12  VGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFL 71
           +G   P Y + KAIE  ++D+  +WL YW  YG FSIAE F+D FL+WFP YY LK  FL
Sbjct: 62  IGFGYPAYISMKAIESPNKDDDTQWLTYWVVYGVFSIAEFFSDLFLSWFPFYYMLKCGFL 121

Query: 72  IWLQLPS-TDGARQLYENYLSPFLLRCQAKADKL 104
           +W   PS ++GA  LY   + P  L+ +++ D +
Sbjct: 122 LWCMAPSPSNGAELLYRRVIRPIFLKHESQVDSV 155

May promote functional cell surface expression of olfactory receptors.

Rattus norvegicus (taxid: 10116)

>sp|Q60870|REEP5_MOUSE Receptor expression-enhancing protein 5 OS=Mus musculus GN=Reep5 PE=1 SV=1

 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 1/94 (1%)

Query: 12  VGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFL 71
           +G   P Y + KAIE  ++D+  +WL YW  YG FSIAE F+D FL+W P YY LK  FL
Sbjct: 58  IGFGYPAYISMKAIESPNKDDDTQWLTYWVVYGVFSIAEFFSDLFLSWLPFYYMLKCGFL 117

Query: 72  IWLQLPS-TDGARQLYENYLSPFLLRCQAKADKL 104
           +W   PS  +GA  LY   + P  LR +++ D +
Sbjct: 118 LWCMAPSPANGAEMLYRRIIRPIFLRHESQVDSV 151

May promote functional cell surface expression of olfactory receptors.

Mus musculus (taxid: 10090)

>sp|Q29RM3|REEP5_BOVIN Receptor expression-enhancing protein 5 OS=Bos taurus GN=REEP5 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 1/94 (1%)

Query: 12  VGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFL 71
           +G   P Y + KAIE  ++++  +WL YW  YG FSI E F+D FL+WFP YY LK  FL
Sbjct: 62  IGFGYPAYVSIKAIESPNKEDDTQWLTYWVVYGVFSIVEFFSDLFLSWFPFYYMLKCGFL 121

Query: 72  IWLQLPS-TDGARQLYENYLSPFLLRCQAKADKL 104
           +W   PS  +GA  LY+  + PF L+ +++ D +
Sbjct: 122 LWCMAPSPANGADLLYKRIIRPFFLKHESQVDNV 155

May enhance the cell surface expression of odorant receptors.

Bos taurus (taxid: 9913)

>sp|Q4QQW1|REEP4_RAT Receptor expression-enhancing protein 4 OS=Rattus norvegicus GN=Reep4 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 56/90 (62%)

Query: 13  GVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLI 72
           G+  P Y+++KA++ K+  E  +W+MYW  +  F  AE F D F++WFP YY +K +F++
Sbjct: 15  GMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEIKMAFVL 74

Query: 73  WLQLPSTDGARQLYENYLSPFLLRCQAKAD 102
           WL  P T GA  LY  ++ P L R + + D
Sbjct: 75  WLLSPYTKGASLLYRKFVHPSLSRHEKEID 104

May enhance the cell surface expression of odorant receptors.

Rattus norvegicus (taxid: 10116)

>sp|Q8K072|REEP4_MOUSE Receptor expression-enhancing protein 4 OS=Mus musculus GN=Reep4 PE=2 SV=1

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 55/90 (61%)

Query: 13  GVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLI 72
           G+  P Y+++KA++ K+  E  +W+MYW  +  F  AE F D F++WFP YY  K +F++
Sbjct: 15  GMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVL 74

Query: 73  WLQLPSTDGARQLYENYLSPFLLRCQAKAD 102
           WL  P T GA  LY  ++ P L R + + D
Sbjct: 75  WLLSPYTKGASLLYRKFVHPSLSRHEKEID 104

May enhance the cell surface expression of odorant receptors.

Mus musculus (taxid: 10090)

>sp|Q5R598|REEP4_PONAB Receptor expression-enhancing protein 4 OS=Pongo abelii GN=REEP4 PE=2 SV=1

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 56/90 (62%)

Query: 13  GVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLI 72
           G+  P Y+++KA++ K+  E  +W+MYW  +  F  AE+  D F++WFP YY +K +F++
Sbjct: 15  GMLCPAYASYKAVKTKNIREYVRWMMYWIVFALFMAAEIITDIFISWFPFYYEIKMAFVL 74

Query: 73  WLQLPSTDGARQLYENYLSPFLLRCQAKAD 102
           WL  P T GA  LY  ++ P L R + + D
Sbjct: 75  WLLSPYTKGASLLYRKFVHPSLSRHEKEID 104

May enhance the cell surface expression of odorant receptors.

Pongo abelii (taxid: 9601)

>sp|Q9H6H4|REEP4_HUMAN Receptor expression-enhancing protein 4 OS=Homo sapiens GN=REEP4 PE=1 SV=1

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 56/90 (62%)

Query: 13  GVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLI 72
           G+  P Y+++KA++ K+  E  +W+MYW  +  F  AE+  D F++WFP YY +K +F++
Sbjct: 15  GMLCPAYASYKAVKTKNIREYVRWMMYWIVFALFMAAEIVTDIFISWFPFYYEIKMAFVL 74

Query: 73  WLQLPSTDGARQLYENYLSPFLLRCQAKAD 102
           WL  P T GA  LY  ++ P L R + + D
Sbjct: 75  WLLSPYTKGASLLYRKFVHPSLSRHEKEID 104

May enhance the cell surface expression of odorant receptors.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	122
255556101	1157	pentatricopeptide repeat-containing prot	0.926	0.097	0.628	3e-40
224096944	196	predicted protein [Populus trichocarpa]	0.926	0.576	0.619	2e-39
255568265	192	Receptor expression-enhancing protein, p	0.926	0.588	0.637	2e-39
359475272	214	PREDICTED: HVA22-like protein k-like [Vi	0.926	0.528	0.619	2e-38
224103445	189	predicted protein [Populus trichocarpa]	0.926	0.597	0.619	2e-38
358248064	193	uncharacterized protein LOC100811809 [Gl	0.926	0.585	0.619	3e-37
297735194	142	unnamed protein product [Vitis vinifera]	0.836	0.718	0.637	1e-36
297802284	205	hypothetical protein ARALYDRAFT_912692 [	0.778	0.463	0.642	1e-36
4006895	227	putative protein [Arabidopsis thaliana]	0.778	0.418	0.652	2e-36
79497359	200	HVA22-like protein k [Arabidopsis thalia	0.926	0.565	0.557	2e-36

>gi|255556101|ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223541748|gb|EEF43296.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis]

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 71/113 (62%), Positives = 91/113 (80%)

Query: 10   CSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFS 69
            C+ GV LPVYSTFKAIE +D  +QQKWL+YWAAYGTFS+AEVFADK L+WFP+YYH+KF+
Sbjct: 1001 CTAGVVLPVYSTFKAIENRDLIDQQKWLLYWAAYGTFSVAEVFADKVLSWFPLYYHVKFA 1060

Query: 70   FLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK 122
            FL+WLQLPS +GARQLY ++L PFLLR QA+ D++    + + D+     QA+
Sbjct: 1061 FLVWLQLPSVNGARQLYMSHLRPFLLRHQARLDQVTGLVYREMDKFVITHQAE 1113

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096944|ref|XP_002310796.1| predicted protein [Populus trichocarpa] gi|222853699|gb|EEE91246.1| predicted protein [Populus trichocarpa]

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 70/113 (61%), Positives = 92/113 (81%)

Query: 10  CSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFS 69
           CSVG+ +PVY TFKAIERKDE+E+QKWLMYWAAYG+F++AEVF DK ++WFPMYYH+KF+
Sbjct: 32  CSVGIVIPVYHTFKAIERKDENEEQKWLMYWAAYGSFTLAEVFTDKLISWFPMYYHMKFA 91

Query: 70  FLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK 122
           FL+WLQLPS +GA+QLY N+L PFL R QA+ D +    + +  +L +  QA+
Sbjct: 92  FLVWLQLPSAEGAKQLYMNHLRPFLSRHQARVDLIMGLAYGEMVKLISNHQAE 144

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568265|ref|XP_002525107.1| Receptor expression-enhancing protein, putative [Ricinus communis] gi|223535566|gb|EEF37234.1| Receptor expression-enhancing protein, putative [Ricinus communis]

 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 72/113 (63%), Positives = 91/113 (80%)

Query: 10  CSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFS 69
           CSVGV LPVYST KAIERKD++EQQKWL+YWAAYG+FS+ EVF DK L WFPMYYH+KF+
Sbjct: 32  CSVGVVLPVYSTLKAIERKDQNEQQKWLIYWAAYGSFSLVEVFTDKLLYWFPMYYHVKFA 91

Query: 70  FLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK 122
           FL+WLQLPSTDGA+Q+Y N+L PF LR QA+ D L    + +  ++ +  +A+
Sbjct: 92  FLVWLQLPSTDGAKQIYTNHLRPFFLRHQARVDMLMGFAYDEMGKIVSTHRAE 144

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475272|ref|XP_002280949.2| PREDICTED: HVA22-like protein k-like [Vitis vinifera] gi|297741427|emb|CBI32558.3| unnamed protein product [Vitis vinifera]

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 70/113 (61%), Positives = 91/113 (80%)

Query: 10  CSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFS 69
           CSVG+  PVYSTFKAIE+KD++EQQ+WL+YWAAYG+FS+AE FADK L WFP+YYH+KF+
Sbjct: 32  CSVGIVFPVYSTFKAIEKKDQNEQQRWLVYWAAYGSFSLAEAFADKVLYWFPLYYHMKFA 91

Query: 70  FLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK 122
           FL+WLQLPSTDGA  LY  +L PFLLR QAK D++    + +  +  ++ QA+
Sbjct: 92  FLVWLQLPSTDGAGHLYMRHLRPFLLRHQAKLDQIMGLLYGEMAKFISLHQAE 144

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103445|ref|XP_002313060.1| predicted protein [Populus trichocarpa] gi|222849468|gb|EEE87015.1| predicted protein [Populus trichocarpa]

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 70/113 (61%), Positives = 92/113 (81%)

Query: 10  CSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFS 69
           CSVG+ALP+YSTFKAIE KD+ EQQ+WL+YWAAYG+FS+AEVFADK L+WFP+YYH+KF+
Sbjct: 27  CSVGIALPIYSTFKAIENKDQIEQQRWLLYWAAYGSFSLAEVFADKILSWFPLYYHMKFA 86

Query: 70  FLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK 122
           FL+WLQLPS +GA QLY ++L PFLLR QA+ D      + + ++  +  QA+
Sbjct: 87  FLVWLQLPSANGAGQLYMSHLRPFLLRHQARLDNFVEFLYGEMNKFVSAHQAE 139

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248064|ref|NP_001239804.1| uncharacterized protein LOC100811809 [Glycine max] gi|255636485|gb|ACU18581.1| unknown [Glycine max]

 Score =  158 bits (400), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/113 (61%), Positives = 91/113 (80%)

Query: 10  CSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFS 69
           C+VGVALPVYSTFKAIE KD+D Q K L+YWAAYG+FS+AEVF DK ++W P+YYHLKF+
Sbjct: 32  CTVGVALPVYSTFKAIESKDQDAQHKCLLYWAAYGSFSLAEVFTDKLISWCPIYYHLKFA 91

Query: 70  FLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK 122
           FL+WLQLPST GA+Q+Y N+L PFLLR QA+ D++    + +  +L +  QA+
Sbjct: 92  FLVWLQLPSTSGAKQIYANHLRPFLLRHQARVDQVLGFAYCEVIKLVSSYQAE 144

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735194|emb|CBI17556.3| unnamed protein product [Vitis vinifera]

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 65/102 (63%), Positives = 85/102 (83%)

Query: 10  CSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFS 69
           CSVG+ LPVYSTFKAIERKD++E+Q+WL+YWAAYG+FS+ EVFADK ++W P+YYHLKF+
Sbjct: 33  CSVGIVLPVYSTFKAIERKDQNEEQRWLLYWAAYGSFSLVEVFADKLISWSPLYYHLKFA 92

Query: 70  FLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAK 111
           FL+WLQ PS+ GAR LY  YL PF LR QA+ D++  + + +
Sbjct: 93  FLVWLQFPSSGGARHLYMCYLRPFFLRHQARIDQVVGSAYGE 134

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802284|ref|XP_002869026.1| hypothetical protein ARALYDRAFT_912692 [Arabidopsis lyrata subsp. lyrata] gi|297314862|gb|EFH45285.1| hypothetical protein ARALYDRAFT_912692 [Arabidopsis lyrata subsp. lyrata]

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 61/95 (64%), Positives = 83/95 (87%)

Query: 10  CSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFS 69
           CS+G+ LPVYSTFKAIE +DE+EQQ+ L+YWAAYG+FS+ EVF DK ++WFP+YYH+KF+
Sbjct: 42  CSIGIGLPVYSTFKAIESRDENEQQRMLIYWAAYGSFSLVEVFTDKIISWFPLYYHVKFA 101

Query: 70  FLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKL 104
           FL+WLQLP+ +G++Q+Y N + PFLLR QA+ D+L
Sbjct: 102 FLVWLQLPTVEGSKQIYNNQIRPFLLRHQARVDRL 136

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4006895|emb|CAB16825.1| putative protein [Arabidopsis thaliana] gi|7270620|emb|CAB80338.1| putative protein [Arabidopsis thaliana]

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 82/95 (86%)

Query: 10  CSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFS 69
           CS+G+ LPVYSTFKAIE  DE+EQQK L+YWAAYG+FS+ EVF DK ++WFP+YYH+KF+
Sbjct: 42  CSIGIGLPVYSTFKAIESGDENEQQKMLIYWAAYGSFSLVEVFTDKIISWFPLYYHVKFA 101

Query: 70  FLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKL 104
           FL+WLQLP+ +G++Q+Y N + PFLLR QA+ D+L
Sbjct: 102 FLVWLQLPTVEGSKQIYNNQIRPFLLRHQARVDQL 136

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79497359|ref|NP_195390.2| HVA22-like protein k [Arabidopsis thaliana] gi|57012586|sp|Q6NLY8.1|HA22K_ARATH RecName: Full=HVA22-like protein k; Short=AtHVA22k gi|45752772|gb|AAS76284.1| At4g36720 [Arabidopsis thaliana] gi|332661293|gb|AEE86693.1| HVA22-like protein k [Arabidopsis thaliana]

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 63/113 (55%), Positives = 88/113 (77%)

Query: 10  CSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFS 69
           CS+G+ LPVYSTFKAIE  DE+EQQK L+YWAAYG+FS+ EVF DK ++WFP+YYH+KF+
Sbjct: 42  CSIGIGLPVYSTFKAIESGDENEQQKMLIYWAAYGSFSLVEVFTDKIISWFPLYYHVKFA 101

Query: 70  FLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK 122
           FL+WLQLP+ +G++Q+Y N + PFLLR QA+ D+L    + +  ++    Q +
Sbjct: 102 FLVWLQLPTVEGSKQIYNNQIRPFLLRHQARVDQLVDGVYGEMVKVVRSHQGE 154

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	122
TAIR|locus:2115315	200	HVA22K "AT4G36720" [Arabidopsi	0.778	0.475	0.652	1.1e-34
UNIPROTKB|Q00765	189	REEP5 "Receptor expression-enh	0.942	0.608	0.420	4.9e-21
RGD|1306047	189	Reep5 "receptor accessory prot	0.795	0.513	0.444	8e-21
MGI|MGI:1270152	185	Reep5 "receptor accessory prot	0.795	0.524	0.444	1.3e-20
UNIPROTKB|Q29RM3	189	REEP5 "Receptor expression-enh	0.795	0.513	0.434	2.1e-20
ZFIN|ZDB-GENE-050320-111	184	zgc:101744 "zgc:101744" [Danio	0.934	0.619	0.393	2.2e-18
ZFIN|ZDB-GENE-040912-98	208	reep6 "receptor accessory prot	0.852	0.5	0.396	2.2e-18
RGD|1306561	257	Reep4 "receptor accessory prot	0.737	0.350	0.4	2.8e-18
MGI|MGI:1919799	257	Reep4 "receptor accessory prot	0.737	0.350	0.4	4.6e-18
UNIPROTKB|Q3ZCI8	257	REEP4 "Receptor expression-enh	0.737	0.350	0.388	5.8e-18

TAIR|locus:2115315 HVA22K "AT4G36720" [Arabidopsis thaliana (taxid:3702)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 62/95 (65%), Positives = 82/95 (86%)

Query:    10 CSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFS 69
             CS+G+ LPVYSTFKAIE  DE+EQQK L+YWAAYG+FS+ EVF DK ++WFP+YYH+KF+
Sbjct:    42 CSIGIGLPVYSTFKAIESGDENEQQKMLIYWAAYGSFSLVEVFTDKIISWFPLYYHVKFA 101

Query:    70 FLIWLQLPSTDGARQLYENYLSPFLLRCQAKADKL 104
             FL+WLQLP+ +G++Q+Y N + PFLLR QA+ D+L
Sbjct:   102 FLVWLQLPTVEGSKQIYNNQIRPFLLRHQARVDQL 136

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q00765 REEP5 "Receptor expression-enhancing protein 5" [Homo sapiens (taxid:9606)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 50/119 (42%), Positives = 72/119 (60%)

Query:     8 LNCS-VGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHL 66
             L C+ +G   P Y + KAIE  ++++  +WL YW  YG FSIAE F+D FL+WFP YY L
Sbjct:    57 LLCNLIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYML 116

Query:    67 KFSFLIWLQLPS-TDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLT-AIT-QAK 122
             K  FL+W   PS ++GA  LY+  + PF L+ +++ D +      K  +   AIT +AK
Sbjct:   117 KCGFLLWCMAPSPSNGAELLYKRIIRPFFLKHESQMDSVVKDLKDKAKETADAITKEAK 175

GO:0016021 "integral to membrane" evidence=NAS

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

RGD|1306047 Reep5 "receptor accessory protein 5" [Rattus norvegicus (taxid:10116)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 44/99 (44%), Positives = 62/99 (62%)

Query:     8 LNCS-VGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHL 66
             L C+ +G   P Y + KAIE  ++D+  +WL YW  YG FSIAE F+D FL+WFP YY L
Sbjct:    57 LLCNLIGFGYPAYISMKAIESPNKDDDTQWLTYWVVYGVFSIAEFFSDLFLSWFPFYYML 116

Query:    67 KFSFLIWLQLPS-TDGARQLYENYLSPFLLRCQAKADKL 104
             K  FL+W   PS ++GA  LY   + P  L+ +++ D +
Sbjct:   117 KCGFLLWCMAPSPSNGAELLYRRVIRPIFLKHESQVDSV 155

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1270152 Reep5 "receptor accessory protein 5" [Mus musculus (taxid:10090)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 44/99 (44%), Positives = 60/99 (60%)

Query:     8 LNCS-VGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHL 66
             L C+ +G   P Y + KAIE  ++D+  +WL YW  YG FSIAE F+D FL+W P YY L
Sbjct:    53 LLCNLIGFGYPAYISMKAIESPNKDDDTQWLTYWVVYGVFSIAEFFSDLFLSWLPFYYML 112

Query:    67 KFSFLIWLQLPS-TDGARQLYENYLSPFLLRCQAKADKL 104
             K  FL+W   PS  +GA  LY   + P  LR +++ D +
Sbjct:   113 KCGFLLWCMAPSPANGAEMLYRRIIRPIFLRHESQVDSV 151

GO:0005515 "protein binding" evidence=IPI

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q29RM3 REEP5 "Receptor expression-enhancing protein 5" [Bos taurus (taxid:9913)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 43/99 (43%), Positives = 62/99 (62%)

Query:     8 LNCS-VGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHL 66
             L C+ +G   P Y + KAIE  ++++  +WL YW  YG FSI E F+D FL+WFP YY L
Sbjct:    57 LLCNLIGFGYPAYVSIKAIESPNKEDDTQWLTYWVVYGVFSIVEFFSDLFLSWFPFYYML 116

Query:    67 KFSFLIWLQLPS-TDGARQLYENYLSPFLLRCQAKADKL 104
             K  FL+W   PS  +GA  LY+  + PF L+ +++ D +
Sbjct:   117 KCGFLLWCMAPSPANGADLLYKRIIRPFFLKHESQVDNV 155

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-050320-111 zgc:101744 "zgc:101744" [Danio rerio (taxid:7955)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 46/117 (39%), Positives = 66/117 (56%)

Query:     8 LNCS-VGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHL 66
             L C+ +G   P Y++ KAIE  ++++  KWL YW  YG FS+AE F+D FL WFP YY  
Sbjct:    57 LLCNLIGFIYPAYASIKAIESNNKEDDTKWLTYWVVYGLFSVAEFFSDIFLFWFPFYYAG 116

Query:    67 KFSFLIWLQLP-STDGARQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTAITQAK 122
             K  FL+W     S +G++ +Y   + PF L+ +A  D + +    K     A T AK
Sbjct:   117 KCLFLLWCMARISWNGSQVIYTRVVRPFFLKHEAVFDNVVSDLSGKAKS-AAETMAK 172

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-040912-98 reep6 "receptor accessory protein 6" [Danio rerio (taxid:7955)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 42/106 (39%), Positives = 61/106 (57%)

Query:     8 LNCS-VGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHL 66
             L C+ +G   P Y + KAIE   +++  +WL YW  YG FS+ E F+D FL WFP YY  
Sbjct:    60 LICNLIGFVYPAYFSIKAIESPGKEDDTQWLTYWVIYGFFSVGEFFSDIFLHWFPFYYVC 119

Query:    67 KFSFLIWLQLP-STDGARQLYENYLSPFLLRCQAKADKLKATTHAK 111
             K  FL+W   P S +G++ LY + + PF L+ +A  D + +    K
Sbjct:   120 KCLFLLWCMAPVSWNGSQVLYRHVVRPFFLKHEAAVDGMVSNISVK 165

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

RGD|1306561 Reep4 "receptor accessory protein 4" [Rattus norvegicus (taxid:10116)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 36/90 (40%), Positives = 56/90 (62%)

Query:    13 GVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLI 72
             G+  P Y+++KA++ K+  E  +W+MYW  +  F  AE F D F++WFP YY +K +F++
Sbjct:    15 GMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEIKMAFVL 74

Query:    73 WLQLPSTDGARQLYENYLSPFLLRCQAKAD 102
             WL  P T GA  LY  ++ P L R + + D
Sbjct:    75 WLLSPYTKGASLLYRKFVHPSLSRHEKEID 104

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1919799 Reep4 "receptor accessory protein 4" [Mus musculus (taxid:10090)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 36/90 (40%), Positives = 55/90 (61%)

Query:    13 GVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLI 72
             G+  P Y+++KA++ K+  E  +W+MYW  +  F  AE F D F++WFP YY  K +F++
Sbjct:    15 GMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVL 74

Query:    73 WLQLPSTDGARQLYENYLSPFLLRCQAKAD 102
             WL  P T GA  LY  ++ P L R + + D
Sbjct:    75 WLLSPYTKGASLLYRKFVHPSLSRHEKEID 104

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q3ZCI8 REEP4 "Receptor expression-enhancing protein 4" [Bos taurus (taxid:9913)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 35/90 (38%), Positives = 55/90 (61%)

Query:    13 GVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLI 72
             G+  P Y+++KA++ K+  E  +W+MYW  +  F   E F D F++WFP YY +K +F++
Sbjct:    15 GMLYPAYASYKAVKTKNIREYVRWMMYWIVFALFMAVETFTDIFISWFPFYYEIKMAFVL 74

Query:    73 WLQLPSTDGARQLYENYLSPFLLRCQAKAD 102
             WL  P T GA  LY  ++ P L R + + D
Sbjct:    75 WLLSPYTRGASMLYRKFVHPSLSRHEKEID 104

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_VII3393 hypothetical protein (196 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	122
pfam03134	94	pfam03134, TB2_DP1_HVA22, TB2/DP1, HVA22 family	2e-28
COG5052	186	COG5052, YOP1, Protein involved in membrane traffi	2e-15

>gnl|CDD|217381 pfam03134, TB2_DP1_HVA22, TB2/DP1, HVA22 family

 Score = 99.2 bits (248), Expect = 2e-28
 Identities = 35/83 (42%), Positives = 53/83 (63%)

Query: 12 VGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFL 71
          +G   P Y+++KA+E KD+++  +WL YW  Y   ++ E F+D  L+W P YY LK  FL
Sbjct: 12 IGFLYPAYASYKALESKDKEDDTQWLTYWVVYSFLTLFESFSDIILSWIPFYYELKLLFL 71

Query: 72 IWLQLPSTDGARQLYENYLSPFL 94
          +WL LP T GA  +Y+ ++ P L
Sbjct: 72 VWLVLPKTQGASYIYDKFIRPLL 94

This family includes members from a wide variety of eukaryotes. It includes the TB2/DP1 (deleted in polyposis) protein, which in humans is deleted in severe forms of familial adenomatous polyposis, an autosomal dominant oncological inherited disease. The family also includes the plant protein of known similarity to TB2/DP1, the HVA22 abscisic acid-induced protein, which is thought to be a regulatory protein. Length = 94

>gnl|CDD|227385 COG5052, YOP1, Protein involved in membrane traffic [Intracellular trafficking and secretion]

 Score = 68.3 bits (167), Expect = 2e-15
 Identities = 27/83 (32%), Positives = 45/83 (54%)

Query: 12  VGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFL 71
            G +LP   +  A    +  +  + L YW  +G  S  E ++   L+  P Y+ LK  FL
Sbjct: 66  AGFSLPAQLSLVAFYTLNFMDDTQLLTYWMVFGFLSAIEKYSGAILSKVPFYWTLKNVFL 125

Query: 72  IWLQLPSTDGARQLYENYLSPFL 94
           +WL LP T+GAR +Y++ ++P +
Sbjct: 126 LWLLLPRTEGARIIYDDIIAPDV 148

Length = 186

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	122
PF03134	94	TB2_DP1_HVA22: TB2/DP1, HVA22 family; InterPro: IP	100.0
KOG1726	225	consensus HVA22/DP1 gene product-related proteins	99.98
KOG1725	186	consensus Protein involved in membrane traffic (YO	99.97
COG5052	186	YOP1 Protein involved in membrane traffic [Intrace	99.9

>PF03134 TB2_DP1_HVA22: TB2/DP1, HVA22 family; InterPro: IPR004345 This family includes members from a wide variety of eukaryotes

Probab=100.00  E-value=1.7e-32  Score=183.81  Aligned_cols=93  Identities=41%  Similarity=0.966  Sum_probs=90.0

Q ss_pred             CchhHHHHHHHHhHhhHHHHHHHhhcCCHHHHhHHHHHHHHHHHHHHHHHhHHhhcccchhHHHHHHHHHHHhhCCCcch
Q 042117            2 SVQDVYLNCSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLIWLQLPSTDG   81 (122)
Q Consensus         2 s~~~~~l~~~ig~~yPay~S~k~l~~~~~~~~~~wL~YWiv~~~~~~~e~~~~~~l~~iP~Y~~~K~~fl~wL~~P~~~G   81 (122)
                      .+..+++|+.+|++||+|+|+|+++++++++.++||+||+++|+++++|.+++.+++|+|+|+++|+++++||.+|+++|
T Consensus         2 ~~~~~~l~~~i~~~yP~~~s~kal~~~~~~~~~~wL~YWiv~~~~~~~e~~~~~~l~~iP~y~~~K~~~~~wL~~p~~~G   81 (94)
T PF03134_consen    2 GFIARLLCNLIGILYPAYKSFKALKSKDKKDLKQWLTYWIVYGLFTLFESFLDFILSWIPFYYEFKLLFLVWLQLPQFQG   81 (94)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHcCCCCc
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhchhh
Q 042117           82 ARQLYENYLSPFL   94 (122)
Q Consensus        82 A~~iy~~~i~p~l   94 (122)
                      |+++|+++++|++
T Consensus        82 a~~iy~~~i~P~~   94 (94)
T PF03134_consen   82 AEYIYDKFIRPFL   94 (94)
T ss_pred             HHHHHHHHccccC
Confidence            9999999999974

It includes the TB2/DP1 (deleted in polyposis) protein which in human is deleted in severe forms of familial adenomatous polyposis, an autosomal dominant oncological inherited disease. The family also includes the plant protein of known similarity to TB2/DP1, the HVA22 abscisic acid-induced protein (e.g. Q07764 from SWISSPROT), which is thought to be a regulatory protein.

>KOG1726 consensus HVA22/DP1 gene product-related proteins [Defense mechanisms]

Probab=99.98  E-value=8e-32  Score=204.74  Aligned_cols=113  Identities=33%  Similarity=0.744  Sum_probs=107.4

Q ss_pred             hHHHHHHHHhHhhHHHHHHHhhc--CCHHHHhHHHHHHHHHHHHHHHHHhHHhhcccchhHHHHHHHHHHHhhCCCcchH
Q 042117            5 DVYLNCSVGVALPVYSTFKAIER--KDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLIWLQLPSTDGA   82 (122)
Q Consensus         5 ~~~l~~~ig~~yPay~S~k~l~~--~~~~~~~~wL~YWiv~~~~~~~e~~~~~~l~~iP~Y~~~K~~fl~wL~~P~~~GA   82 (122)
                      .+++.+++|+.||||+|+|++++  ++.++...|++||||+|+++++|.+.|++++|+|+|+++|++|++||..|.++|+
T Consensus         2 ~~~lv~v~G~~yPAy~tyKavk~~~~~i~el~~W~~YWIv~A~~t~~e~~~d~~lsw~P~Y~e~Kl~fv~wL~~p~t~G~   81 (225)
T KOG1726|consen    2 IRLLVLVFGYAYPAYATYKAVKSNRKDIRELLRWMMYWIVFAALTVFETLTDFLLSWFPFYSEFKLAFVIWLLSPATKGA   81 (225)
T ss_pred             eehHHHHHHHHhHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccccCcc
Confidence            46788899999999999999998  6678899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 042117           83 RQLYENYLSPFLLRCQAKADKLKATTHAKFDQLTA  117 (122)
Q Consensus        83 ~~iy~~~i~p~l~~~e~~ID~~l~~~~~~~~~~~~  117 (122)
                      .++|+++++|++.++|++||+.+..++++..+.+.
T Consensus        82 ~~vY~~f~~p~ls~~E~eid~~l~~~k~~~~~~a~  116 (225)
T KOG1726|consen   82 SYVYRKFLRPFLSKHEEEIDRMLVEAKERVYDAAV  116 (225)
T ss_pred             HHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999777654

>KOG1725 consensus Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family) [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=2e-32  Score=203.16  Aligned_cols=105  Identities=33%  Similarity=0.780  Sum_probs=101.0

Q ss_pred             hhHHHHHHHHhHhhHHHHHHHhhcCCHHHHhHHHHHHHHHHHHHHHHHhHHhhcccchhHHHHHHHHHHHhhCCCcchHH
Q 042117            4 QDVYLNCSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLIWLQLPSTDGAR   83 (122)
Q Consensus         4 ~~~~l~~~ig~~yPay~S~k~l~~~~~~~~~~wL~YWiv~~~~~~~e~~~~~~l~~iP~Y~~~K~~fl~wL~~P~~~GA~   83 (122)
                      ...++||.+|++||+|+|++++++++++|+++||+||++||+++++|.+.+.+++|+|+||++|++|++||..|+++||.
T Consensus        57 ~~~l~cn~ig~~yP~y~Sv~aIes~~k~dD~~wL~YWivys~lslie~~~~~il~~iP~y~~~K~~fl~~l~lP~~~Ga~  136 (186)
T KOG1725|consen   57 GGPLLCNLIGFLYPAYASVKAIESPSKDDDTQWLTYWIVYSILSLVEFFSVAILSWIPFYWYAKLIFLLWLVLPQFNGAA  136 (186)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHhccCCCCce
Confidence            56789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhchhhhhhhHHHHHHHHHH
Q 042117           84 QLYENYLSPFLLRCQAKADKLKATT  108 (122)
Q Consensus        84 ~iy~~~i~p~l~~~e~~ID~~l~~~  108 (122)
                      .+|++++||++.+++.++|+..+..
T Consensus       137 ~iY~~~vrp~~~~~~~~~~~~~~~~  161 (186)
T KOG1725|consen  137 IIYNHIVRPFFLKHSREIDDIEDAN  161 (186)
T ss_pred             eeechhhhhhhhhhhhhhhhhhhcc
Confidence            9999999999999999999887753

>COG5052 YOP1 Protein involved in membrane traffic [Intracellular trafficking and secretion]

Probab=99.90  E-value=3e-23  Score=152.46  Aligned_cols=111  Identities=26%  Similarity=0.501  Sum_probs=101.5

Q ss_pred             HHHHHHHhHhhHHHHHHHhhcCCHHHHhHHHHHHHHHHHHHHHHHhHHhhcccchhHHHHHHHHHHHhhCCCcchHHHHH
Q 042117            7 YLNCSVGVALPVYSTFKAIERKDEDEQQKWLMYWAAYGTFSIAEVFADKFLTWFPMYYHLKFSFLIWLQLPSTDGARQLY   86 (122)
Q Consensus         7 ~l~~~ig~~yPay~S~k~l~~~~~~~~~~wL~YWiv~~~~~~~e~~~~~~l~~iP~Y~~~K~~fl~wL~~P~~~GA~~iy   86 (122)
                      ++.+.+|+..|++.|.++++..++.|++||++||+|+++.+++|.++..+++|+|+||..|.+|++|+..|+++||..+|
T Consensus        61 ilt~~~~~~lP~~~~l~a~~~~n~~dd~q~l~ywmV~~~lsaie~~s~~il~~vP~Y~~~K~vFllw~~~prt~GA~~IY  140 (186)
T COG5052          61 ILTNVAGFSLPAQLSLVAFYTLNFMDDTQLLTYWMVFGFLSAIEKYSGAILSKVPFYWTLKNVFLLWLLLPRTEGARIIY  140 (186)
T ss_pred             HHHHHHHHHccHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhccccCceeeeH
Confidence            67788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhchhhhhhhHH-HHHHHHHHHHHHHHHHH
Q 042117           87 ENYLSPFLLRCQAK-ADKLKATTHAKFDQLTA  117 (122)
Q Consensus        87 ~~~i~p~l~~~e~~-ID~~l~~~~~~~~~~~~  117 (122)
                      +++++|..+++-.+ ||+.+.+..+....+.+
T Consensus       141 ~~~i~p~~s~~~~~~IektV~~~~~A~a~~aS  172 (186)
T COG5052         141 DDIIAPDVSDHGFRTIEKTVKNGTKASAAVAS  172 (186)
T ss_pred             HhhccccccHHHHHHHHHHHHhhccccHHHHH
Confidence            99999999888766 89888877655444433

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00