Citrus Sinensis ID: 042300

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520
MGKKPAFLLLPFFFLALSGPAHTRARPITNLSTVVISDGTHDVREPASTQLNNKYLISPSDMCEQTYGFLPCTTSLLGNVFLIAVYGYLMLLAAKLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGSTVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTVLISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFATSSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSVFLSLVYFRHLTWNFSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYVLDD
ccccccHHHHHHHHHHHHcccccccccccccccEEEEcccccccccccccccccccccccccccccccEEcccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccHHHHccccHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHcccEEEEEccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHHHHccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHcccccccccHHHHHHHHHHccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccc
cccHHHHHHHHHHHHHHHccccEEEEEccccccEEEEccccccccccEEEEccccccccHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccHHHHHHHHHHHcHHHEEEEHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEccccccccccccccccccccccccEcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccHHHHHHHHHHHHccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcc
mgkkpafllLPFFFLalsgpahtrarpitnlstvvisdgthdvrepastqlnnkylispsdmceqtygflpcttsllGNVFLIAVYGYLMLLAAKLLSNGSEILLQiigpgiigglflpvlssvpDAAIILASglsgsketaqNQVSVGMGLLAGSTVMLLTVLWGScllvgkcdiegttavdlkdtkrfsltgsgvstdVWTCYAARIMVLSIVPFIIvqlpqvlnttSISRVTVLISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKthslgrlftddgepnIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAiqrhddgswtprlinDFQEVSVSILLMGTIVAAvcsdplvdavdnfstasnipsLFVAFIILPFATSSEAVSALIFASRkrsrtssltYSAIYGSVTMSNILSLSVFLSLVYFRHLTWNFSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYVLDD
MGKKPAFLLLPFFFLALSGPAHTRARPITNLSTVVISDGTHDVREPASTQLNNKYLISPSDMCEQTYGFLPCTTSLLGNVFLIAVYGYLMLLAAKLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGSTVMLLTVLWGSCLLVGKCDIEgttavdlkdtkrfsltgsgvstdVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTVLISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAiqrhddgswtpRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFATSSEAVSALIFasrkrsrtssLTYSAIYGSVTMSNILSLSVFLSLVYFRHLTWNFSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYVLDD
MGKKpaflllpffflalSGPAHTRARPITNLSTVVISDGTHDVREPASTQLNNKYLISPSDMCEQTYGFLPCTTSLLGNVFLIAVYGYLMLLAAKLLSNGSEillqiigpgiigglflPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGSTVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTsisrvtvlislivsislviaysiYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFATSSEAVSALIFASRKRSRTSSLTYSAIYGSVTMsnilslsvflslVYFRHLTWNFSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMlypfsllllyvlDD
*****AFLLLPFFFLALSGPAHTRARPITNLSTVVISDGTHDV******QLNNKYLISPSDMCEQTYGFLPCTTSLLGNVFLIAVYGYLMLLAAKLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLS******QNQVSVGMGLLAGSTVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTVLISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFATSSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSVFLSLVYFRHLTWNFSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYVL**
*****AF*LLPFFFLALSGPAHT**********************************SPSDMCEQTYGFLPCTTSLLGNVFLIAVYGYLMLLAAKLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLSG**E*****VSVGMGLLAGSTVMLLTVLWGSCLLVGKC****************SLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTVLISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILK*******************DVIQKLFN*****************LVIGI******MNIDELLK*************************DFQEVSVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFATSSEAVSA************SLTYSAIYGSVTMSNILSLSVFLSLVYFRHLTWNFSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYVLDD
MGKKPAFLLLPFFFLALSGPAHTRARPITNLSTVVISDGTHDVREPASTQLNNKYLISPSDMCEQTYGFLPCTTSLLGNVFLIAVYGYLMLLAAKLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGSTVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTVLISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFATSSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSVFLSLVYFRHLTWNFSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYVLDD
*GKKPAFLLLPFFFLALSGPAHTRARPITNLSTVVISDGTHDVREPASTQLNNKYLISPSDMCEQTYGFLPCTTSLLGNVFLIAVYGYLMLLAAKLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGSTVMLLTVLWGSCLLVGKCDIEGT*********RFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTVLISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHS*******GSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFATSSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSVFLSLVYFRHLTWNFSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYVLDD
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooo
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiii
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGKKPAFLLLPFFFLALSGPAHTRARPITNLSTVVISDGTHDVREPASTQLNNKYLISPSDMCEQTYGFLPCTTSLLGNVFLIAVYGYLMLLAAKLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGSTVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTVLISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFATSSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSVFLSLVYFRHLTWNFSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYVLDD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query520
255568335543 calcium ion binding protein, putative [R 0.932 0.893 0.603 1e-179
225446529577 PREDICTED: uncharacterized protein LOC10 0.928 0.837 0.608 1e-168
225461603579 PREDICTED: uncharacterized protein LOC10 0.951 0.854 0.564 1e-167
224056545591 predicted protein [Populus trichocarpa] 0.953 0.839 0.547 1e-163
356549685579 PREDICTED: uncharacterized protein LOC10 0.971 0.872 0.526 1e-159
147857428598 hypothetical protein VITISV_033128 [Viti 0.928 0.807 0.569 1e-158
449456591589 PREDICTED: uncharacterized protein LOC10 0.932 0.823 0.531 1e-157
307135947585 sodium/calcium exchanger family protein 0.923 0.820 0.531 1e-156
449456593584 PREDICTED: uncharacterized protein LOC10 0.923 0.821 0.525 1e-153
291621327581 sodium/calcium exchanger protein [Dianth 0.946 0.846 0.511 1e-152
>gi|255568335|ref|XP_002525142.1| calcium ion binding protein, putative [Ricinus communis] gi|223535601|gb|EEF37269.1| calcium ion binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  633 bits (1632), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 324/537 (60%), Positives = 404/537 (75%), Gaps = 52/537 (9%)

Query: 35  VISDGTHDVREPASTQLNNKYLISPSDMCEQTYGFLPCTTSLLGNVFLIAVYGYLMLLAA 94
           ++SDG +   +     +    L S    C++TYGF PCTT++LGN+FLI VYGYLM L+A
Sbjct: 1   MVSDGKYSSAQGQQPFIRLYDLFSSDGSCDETYGFFPCTTTILGNIFLILVYGYLMFLSA 60

Query: 95  KLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLA 154
           KLLS+GSEILLQI+GPGIIGGLFLPVLS++PD+AIILASGLSGS ETAQ+QVSVGMGL+A
Sbjct: 61  KLLSDGSEILLQILGPGIIGGLFLPVLSALPDSAIILASGLSGSTETAQSQVSVGMGLMA 120

Query: 155 GSTVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSI 214
           GSTV+LLT+LWGSCL+VGKCDIEG+ AVD KDTK FSL GSGV+TD+WT +AAR+MV+SI
Sbjct: 121 GSTVLLLTLLWGSCLIVGKCDIEGSVAVDSKDTKTFSLIGSGVTTDIWTSFAARLMVISI 180

Query: 215 VPFIIVQLPQVLNTTSISRVTVLISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLI 274
           +PFI+VQLPQVL+ TS SR+ +L+SLIVS+ L++ YS+YQV QPWIQKRRI YAK K +I
Sbjct: 181 IPFILVQLPQVLHRTSQSRLAILVSLIVSLILLVCYSLYQVVQPWIQKRRIAYAKHKNII 240

Query: 275 SGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDID 334
           SGILK +K  SLGRLFT +G+ N D+IQKLF  ID+N+DG L+  EL+AL+IGIQF+++D
Sbjct: 241 SGILKDLKKRSLGRLFTVNGDLNRDIIQKLFKTIDDNSDGYLTIAELKALIIGIQFDELD 300

Query: 335 MN----IDELLK--------------------KWLNRLKHSAIQRHDDGSWTPRLINDFQ 370
           ++    +D++LK                    KWL   KHSA    D    + +++  F 
Sbjct: 301 IDVSVAVDQVLKDFDTSGDSCVDMDEFTRGISKWLREAKHSARYFDDHSRGSSQVLTGFD 360

Query: 371 EVS----------------------------VSILLMGTIVAAVCSDPLVDAVDNFSTAS 402
           + +                            V +L++GTIVAAV +DPLVDAVDNFSTAS
Sbjct: 361 QQTSAEEDVLGDQTGEISSNPGNPKWNTTKAVLMLILGTIVAAVFADPLVDAVDNFSTAS 420

Query: 403 NIPSLFVAFIILPFATSSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSVFLSL 462
           NIP+ FV+F+ILPFA+SSE VS +IFASRK+SR +SL YS IYGSVTMSN+LSLSVFL L
Sbjct: 421 NIPTFFVSFVILPFASSSEVVSDMIFASRKKSRYASLAYSEIYGSVTMSNVLSLSVFLGL 480

Query: 463 VYFRHLTWNFSAEVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYVLD 519
           VYFR LTWNFS+EV +IL+VCI +GLIAS RTTFPLWM LVA  +YPFSLLL Y+ +
Sbjct: 481 VYFRGLTWNFSSEVLIILIVCIAIGLIASLRTTFPLWMSLVAYAMYPFSLLLAYIFN 537

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225446529|ref|XP_002279120.1| PREDICTED: uncharacterized protein LOC100253888 [Vitis vinifera] gi|302143383|emb|CBI21944.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225461603|ref|XP_002282948.1| PREDICTED: uncharacterized protein LOC100252144 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224056545|ref|XP_002298903.1| predicted protein [Populus trichocarpa] gi|222846161|gb|EEE83708.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356549685|ref|XP_003543222.1| PREDICTED: uncharacterized protein LOC100809896 [Glycine max] Back     alignment and taxonomy information
>gi|147857428|emb|CAN78652.1| hypothetical protein VITISV_033128 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449456591|ref|XP_004146032.1| PREDICTED: uncharacterized protein LOC101209298 isoform 1 [Cucumis sativus] gi|449507105|ref|XP_004162934.1| PREDICTED: uncharacterized protein LOC101229160 isoform 1 [Cucumis sativus] Back     alignment and taxonomy information
>gi|307135947|gb|ADN33808.1| sodium/calcium exchanger family protein [Cucumis melo subsp. melo] Back     alignment and taxonomy information
>gi|449456593|ref|XP_004146033.1| PREDICTED: uncharacterized protein LOC101209298 isoform 2 [Cucumis sativus] gi|449507108|ref|XP_004162935.1| PREDICTED: uncharacterized protein LOC101229160 isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|291621327|dbj|BAI94501.1| sodium/calcium exchanger protein [Dianthus caryophyllus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query520
TAIR|locus:2009580585 AT1G53210 [Arabidopsis thalian 0.625 0.555 0.509 2.9e-118
DICTYBASE|DDB_G0278609574 DDB_G0278609 [Dictyostelium di 0.825 0.747 0.317 7.2e-52
TAIR|locus:2055471566 AT2G34030 [Arabidopsis thalian 0.6 0.551 0.271 1.8e-41
TAIR|locus:2055461610 AT2G34020 [Arabidopsis thalian 0.311 0.265 0.278 8.7e-35
TAIR|locus:2009580 AT1G53210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 799 (286.3 bits), Expect = 2.9e-118, Sum P(2) = 2.9e-118
 Identities = 168/330 (50%), Positives = 216/330 (65%)

Query:    21 AHTRARPITNLSTVVISDGTHDVREPASTQLNNKYLIS-PSD----MCEQTYGFLPCTTS 75
             A+ R   +   ST +ISDG       A +    K ++S P++     CEQTYGF+PCT +
Sbjct:    19 AYARFVSLNPSSTSLISDGIDGGSNLAGSGSVIKSVVSAPAEEKEEACEQTYGFMPCTKT 78

Query:    76 LLGNVFLIAVYGYLMLLAAKLLSNGSEXXXXXXXXXXXXXXXXPVLSSVPDAAIILASGL 135
              LGNVFLI VYG+LM  AA  LS GSE                P+L ++PDA +I+ SGL
Sbjct:    79 ALGNVFLILVYGFLMFTAATYLSAGSELLLEILGPGIVGGLFLPMLGALPDAMLIMVSGL 138

Query:   136 SGSKETAQNQVSVGMGLLAGSTVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGS 195
             SG   TAQ+QVSVGMGLLAGSTVMLLTV+WG+C +VGKCD+  + AV+ +DTK F L  S
Sbjct:   139 SGDAATAQSQVSVGMGLLAGSTVMLLTVIWGTCTVVGKCDLRDSIAVNNQDTKGFHLKDS 198

Query:   196 GVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTXXXXXXXXXXXXXXXXXXXXXXXYQV 255
             GV+ D+WT YAARIM +S++PF+IVQLPQ+L +T                       YQV
Sbjct:   199 GVTVDIWTSYAARIMAISVIPFVIVQLPQMLGSTSGRQLSVLIALILSVLMLISYCVYQV 258

Query:   256 FQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGC 315
             FQPWIQ+RR+ +AK K +ISGIL+ +K H+LGRL  D+G+P+  VI+KLF  ID N DG 
Sbjct:   259 FQPWIQRRRLAFAKHKHVISGILRHLKQHALGRLLDDEGQPDEHVIRKLFLTIDANNDGH 318

Query:   316 LSAKELRALVIGIQFEDIDMNIDELLKKWL 345
             LSA EL+AL+IGI FEDID + D+ + K L
Sbjct:   319 LSAAELKALIIGISFEDIDFDKDDAVGKVL 348
GO:0005509 "calcium ion binding" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0016020 "membrane" evidence=ISS;IDA
GO:0005773 "vacuole" evidence=IDA
GO:0000325 "plant-type vacuole" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0007030 "Golgi organization" evidence=RCA
GO:0007033 "vacuole organization" evidence=RCA
GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA
DICTYBASE|DDB_G0278609 DDB_G0278609 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2055471 AT2G34030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055461 AT2G34020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query520
pfam01699135 pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot 1e-08
COG0387368 COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion t 1e-04
COG0530320 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion 5e-04
pfam1349960 pfam13499, EF_hand_5, EF-hand domain pair 0.003
>gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein Back     alignment and domain information 
 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 9/139 (6%)

Query: 382 IVAAVCSDPLVDAVDNFSTASNIPSLFVAFIILPFATSS-EAVSALIFASRKRSRTSSLT 440
           ++  + +D LVD+ ++ +    I    +   +L   TS  E  S++I A +  +  +   
Sbjct: 1   LLIILLADLLVDSAESIAEVLGISPTVIGLTLLALGTSLPELFSSIIAALKGNADLA--- 57

Query: 441 YSAIYGSVTMSNIL---SLSVFLSLVYFRHLTWNFSAEVSVILLVCILMGLI-ASFRTTF 496
              + GS  + NIL    LS  +S +  + L    S + S +LLV +L+ L         
Sbjct: 58  LGNVIGSN-LFNILLVLGLSALISPIGLKVLVSPLSLDFSFLLLVLLLLLLFLLLSDGRI 116

Query: 497 PLWMCLVACMLYPFSLLLL 515
             +  LV  +LY   L+L 
Sbjct: 117 SRFEGLVLLLLYIVYLVLS 135

This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3. Length = 135
>gnl|CDD|223464 COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 520
KOG1397441 consensus Ca2+/H+ antiporter VCX1 and related prot 100.0
TIGR00378349 cax calcium/proton exchanger (cax). 100.0
TIGR00846365 caca2 calcium/proton exchanger. This model is gene 100.0
COG0387368 ChaA Ca2+/H+ antiporter [Inorganic ion transport a 100.0
PRK10734325 putative calcium/sodium:proton antiporter; Provisi 100.0
COG0530320 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport 100.0
TIGR00367307 K+-dependent Na+/Ca+ exchanger related-protein. Th 100.0
PRK10599366 calcium/sodium:proton antiporter; Provisional 99.98
TIGR009271096 2A1904 K+-dependent Na+/Ca+ exchanger. 99.91
KOG1307588 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an 99.82
PLN03151650 cation/calcium exchanger; Provisional 99.74
PRK10734 325 putative calcium/sodium:proton antiporter; Provisi 99.5
PF01699140 Na_Ca_ex: Sodium/calcium exchanger protein; InterP 99.41
TIGR00367 307 K+-dependent Na+/Ca+ exchanger related-protein. Th 99.37
COG0530 320 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport 99.32
PF01699140 Na_Ca_ex: Sodium/calcium exchanger protein; InterP 99.31
TIGR00927 1096 2A1904 K+-dependent Na+/Ca+ exchanger. 99.29
TIGR00846365 caca2 calcium/proton exchanger. This model is gene 99.13
PLN03151 650 cation/calcium exchanger; Provisional 98.86
TIGR00845928 caca sodium/calcium exchanger 1. This model is spe 98.85
TIGR00378349 cax calcium/proton exchanger (cax). 98.84
TIGR00845928 caca sodium/calcium exchanger 1. This model is spe 98.73
KOG2399605 consensus K+-dependent Na+:Ca2+ antiporter [Inorga 98.65
KOG1307 588 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an 98.12
PRK10599366 calcium/sodium:proton antiporter; Provisional 97.48
COG0387368 ChaA Ca2+/H+ antiporter [Inorganic ion transport a 96.26
PF1349966 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 95.5
KOG2399605 consensus K+-dependent Na+:Ca2+ antiporter [Inorga 94.53
PF1320225 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ 93.51
PF1340531 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J 93.46
cd0502693 S-100Z S-100Z: S-100Z domain found in proteins sim 92.99
PF0003629 EF-hand_1: EF hand; InterPro: IPR018248 Many calci 92.76
KOG1306596 consensus Ca2+/Na+ exchanger NCX1 and related prot 92.72
KOG1306596 consensus Ca2+/Na+ exchanger NCX1 and related prot 92.59
KOG1397441 consensus Ca2+/H+ antiporter VCX1 and related prot 92.49
cd0005267 EH Eps15 homology domain; found in proteins implic 91.21
cd0502592 S-100A1 S-100A1: S-100A1 domain found in proteins 89.14
cd0502788 S-100B S-100B: S-100B domain found in proteins sim 88.28
KOG0027151 consensus Calmodulin and related proteins (EF-Hand 87.51
smart0002796 EH Eps15 homology domain. Pair of EF hand motifs t 87.05
cd0502289 S-100A13 S-100A13: S-100A13 domain found in protei 86.59
cd0021388 S-100 S-100: S-100 domain, which represents the la 86.16
COG5126160 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S 85.61
cd0502988 S-100A6 S-100A6: S-100A6 domain found in proteins 85.05
cd00252116 SPARC_EC SPARC_EC; extracellular Ca2+ binding doma 83.29
cd0503194 S-100A10_like S-100A10_like: S-100A10 domain found 80.41
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.2e-43  Score=361.27  Aligned_cols=319  Identities=22%  Similarity=0.340  Sum_probs=265.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhHHHHHHHHHH
Q 042300           86 YGYLMLLAAKLLSNGSEILLQIIGPGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGSTVMLLTVLW  165 (520)
Q Consensus        86 ~~~lL~~~A~lls~gse~La~~lg~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS~i~nLtLi~  165 (520)
                      -...++|.|++++.++|+|+...|| .+||++|+++||+.|+++.++|..       |+++.+++++++||++.|+++++
T Consensus       102 sll~iiPLA~~l~~ateqls~~tg~-tvGgllNAtfGnaiElii~ilALk-------~g~~riVq~SlLGSILsnlLLvl  173 (441)
T KOG1397|consen  102 SLLGIIPLAERLGFATEQLSAYTGP-TVGGLLNATFGNAIELIIYILALK-------NGKVRIVQGSLLGSILSNLLLVL  173 (441)
T ss_pred             HHhhhhhHHHHHHHHHHHHHhhcCC-cHHHHHhhhhccHHHHHHHHHHhh-------cCceEEEehhhHHHHHHHHHHHh
Confidence            3346889999999999999999999 889999999999999999999998       99999999999999999999999


Q ss_pred             HHHHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhccccc--------ccccch
Q 042300          166 GSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSI--------SRVTVL  237 (520)
Q Consensus       166 G~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~--------~~~~~~  237 (520)
                      |+|++.|+++         |++|.||.+.++        .++.++.++++..+   +|++++.+.+        ......
T Consensus       174 G~s~~~Ggi~---------rk~Q~Fn~~~A~--------v~s~lLl~a~l~~l---~P~~l~~~~~~~~~~~~~~~~~l~  233 (441)
T KOG1397|consen  174 GLSLFCGGIR---------RKDQRFNIKSAG--------VNSALLLLAVLGIL---LPTVLHYTYGGEVHDCSSGGAILP  233 (441)
T ss_pred             hHHHhhcccc---------cceeecccchhh--------HHHHHHHHHHHHHH---HHHHHHHhcCccccccCCccceee
Confidence            9999999999         789999999888        47788888888877   8999986543        223567


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhhHhhhhhhhhhcccCccccCCCCCchHHHHhhhhhcccccCCccc
Q 042300          238 ISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCLS  317 (520)
Q Consensus       238 is~ivsivlLi~Y~~Yl~f~~~~q~~rl~~~~~~~~~~~~~~h~~~~~~~~l~~~~g~~~~~~~~~lF~~~d~~~d~~i~  317 (520)
                      +||..|++++++|.+|++||+|                 +|+|.+..         -.|++|         |.+.|+..+
T Consensus       234 lSr~~SivmliaYi~~L~FqL~-----------------t~~h~~~~---------~~~~ee---------~~~~d~~~s  278 (441)
T KOG1397|consen  234 LSRGCSIVMLIAYIAYLWFQLK-----------------TARHIWQF---------PTPDEE---------ETEQDDEVS  278 (441)
T ss_pred             ehhccHHHHHHHHHHHHHHhhh-----------------cccccCCC---------CCCChh---------ccccccccc
Confidence            9999999999999999999999                 44442110         001111         111111110


Q ss_pred             HHHHHHHHhcccccccccchhHHHHHHHhhhccccccccCCCCCCcccccchhHHHHHHHHHHHHHHHHchHHhHhhHHH
Q 042300          318 AKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVDN  397 (520)
Q Consensus       318 ~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~i~~~~~~~~~~~~~~~~~~~ai~~Lllg~~lv~~~A~~lV~si~~  397 (520)
                      .                  +||          .+.++.               ++++++|+..|++++++||++|++||+
T Consensus       279 ~------------------~~e----------~p~is~---------------~ss~~~L~~~T~~vsllaeyLV~~Id~  315 (441)
T KOG1397|consen  279 N------------------EDE----------APNISR---------------WSSIIWLLIMTLLVSLLAEYLVDTIDD  315 (441)
T ss_pred             c------------------cCC----------CCcchH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            0                  000          111122               789999999999999999999999999


Q ss_pred             HHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHH-------HHHHhhccccc
Q 042300          398 FSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSV-------FLSLVYFRHLT  469 (520)
Q Consensus       398 ~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v-------~l~lv~~r~l~  469 (520)
                      .++.+|+|+.|||+|++|+++ +.||++||.+|.|+|+|++        -+|..++.+|+++       +.+|.++.+|+
T Consensus       316 ~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k~kldLs--------lgVaigsalQI~Lf~vP~~v~v~W~~g~~M~  387 (441)
T KOG1397|consen  316 VSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMKDKLDLS--------LGVAIGSALQIALFVVPFSVIVGWIMGISMD  387 (441)
T ss_pred             HHHhcCCChhhheeeeecccCchHHhhcceeeeecCcccch--------hhhhhhhhHhHHHhhhhHHHHhhhhcCCceE
Confidence            999999999999999999999 9999999999999999999        9999999999876       57899999999


Q ss_pred             ccchh-hHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHhhc
Q 042300          470 WNFSA-EVSVILLVCILMGLIASFRTTFPLWMCLVACMLYPFSLLLLYVLD  519 (520)
Q Consensus       470 w~fs~-Evlvillv~~~vg~~~~~r~t~~~~~g~~~~~lY~~sl~lv~~l~  519 (520)
                      ++|+. |+..+++..+++.++. ..++-.+..|.+++++|.+..+-.++.+
T Consensus       388 LnF~~~et~~l~isVfl~~y~l-qdG~Sny~kG~mLll~Y~Iia~~Ff~~~  437 (441)
T KOG1397|consen  388 LNFPLLETACLFISVFLVAYLL-QDGKSNYFKGLMLLLCYLIIAAGFFVYN  437 (441)
T ss_pred             EeccHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHHhhccC
Confidence            99999 9999998888877776 4777888899999999987766555443

>TIGR00378 cax calcium/proton exchanger (cax) Back     alignment and domain information
>TIGR00846 caca2 calcium/proton exchanger Back     alignment and domain information
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10734 putative calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein Back     alignment and domain information
>PRK10599 calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PLN03151 cation/calcium exchanger; Provisional Back     alignment and domain information
>PRK10734 putative calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins Back     alignment and domain information
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein Back     alignment and domain information
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins Back     alignment and domain information
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>TIGR00846 caca2 calcium/proton exchanger Back     alignment and domain information
>PLN03151 cation/calcium exchanger; Provisional Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>TIGR00378 cax calcium/proton exchanger (cax) Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PRK10599 calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E Back     alignment and domain information
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A Back     alignment and domain information
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B Back     alignment and domain information
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z Back     alignment and domain information
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand Back     alignment and domain information
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction Back     alignment and domain information
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 Back     alignment and domain information
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B Back     alignment and domain information
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] Back     alignment and domain information
>smart00027 EH Eps15 homology domain Back     alignment and domain information
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 Back     alignment and domain information
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif Back     alignment and domain information
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] Back     alignment and domain information
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 Back     alignment and domain information
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) Back     alignment and domain information
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query520
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
3cs1_A219 Flagellar calcium-binding protein; myristoylated, 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 66.8 bits (162), Expect = 1e-11
 Identities = 40/278 (14%), Positives = 80/278 (28%), Gaps = 73/278 (26%)

Query: 235 TVLISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDG 294
           T +   +     V     +++F  W+                        +L    + + 
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIF--WL------------------------NLKNCNSPET 197

Query: 295 EPNIDVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQ 354
              ++++QKL   ID N                    +I + I  + +  L RL  S   
Sbjct: 198 V--LEMLQKLLYQIDPNWTSRSD-----------HSSNIKLRIHSI-QAELRRLLKSKPY 243

Query: 355 RH-----DDGSWTPRLINDF----------QEVSVSILLMGTIVAAVCSDPLVDAVDNFS 399
            +      +     +  N F          +   V+  L       +    L        
Sbjct: 244 ENCLLVLLN-VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI---SLDHHSMTL- 298

Query: 400 TASNIPSLFVAFI-ILPFATSSEAVS----AL-IFASRKRSRTSSLTYSAIYGSVTMSNI 453
           T   + SL + ++   P     E ++     L I A   R   ++           ++ I
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358

Query: 454 LSLSV-FLSLVYFRHLTWNFS-----AEVSVILLVCIL 485
           +  S+  L    +R +    S     A +  ILL  ++
Sbjct: 359 IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL-SLI 395
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query520
3v5u_A320 Uncharacterized membrane protein MJ0091; lipid cub 100.0
3v5u_A 320 Uncharacterized membrane protein MJ0091; lipid cub 99.53
2lv7_A100 Calcium-binding protein 7; metal binding protein; 94.77
2b1u_A71 Calmodulin-like protein 5; CLSP, calmodulin-like S 94.21
2kz2_A94 Calmodulin, CAM; TR2C, metal binding protein; NMR 93.57
2lnk_A113 Protein S100-A4; EF-hand, calcium binding, all alp 93.34
1yx7_A83 Calsensin, LAN3-6 antigen; calcium-binding protein 93.33
1c07_A95 Protein (epidermal growth factor receptor pathway 93.29
1tiz_A67 Calmodulin-related protein, putative; helix-turn-h 93.07
1fi6_A92 EH domain protein REPS1; EPS15 homology domain, EF 92.85
1qjt_A99 EH1, epidermal growth factor receptor substrate su 92.67
4eto_A93 Protein S100-A4; calcium-binding protein, EF-hand, 92.64
2d58_A107 Allograft inflammatory factor 1; EF-hand, metal bi 92.55
2kgr_A111 Intersectin-1; structure, alternative splicing, ca 92.47
3n22_A98 Protein S100-A2; EF-hand, calcium-binding, zinc-bi 92.23
2ktg_A85 Calmodulin, putative; ehcam, Ca-binding protein, p 92.14
3nso_A101 Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta 91.97
2joj_A77 Centrin protein; N-terminal domain, centrin soluti 91.96
4drw_A121 Protein S100-A10/annexin A2 chimeric protein; atyp 91.95
1k9u_A78 Polcalcin PHL P 7; pollen allergen, calcium-bindin 91.91
2opo_A86 Polcalcin CHE A 3; calcium-binding protein, dimer, 91.82
2pmy_A91 RAS and EF-hand domain-containing protein; rasef, 91.81
3fs7_A109 Parvalbumin, thymic; calcium-binding protein, EF-h 91.73
1j7q_A86 CAVP, calcium vector protein; EF-hand family, calc 91.72
1iq3_A110 Ralbp1-interacting protein (partner of ralbp1); EF 91.6
3zwh_A104 Protein S100-A4; Ca-binding protein-motor protein 91.54
3nxa_A100 Protein S100-A16; S100 family, calcium binding pro 91.51
3rm1_A92 Protein S100-B; alpha-helical, EF hand, metal bind 91.49
2lmt_A148 Calmodulin-related protein 97A; spermatogenesis, m 91.3
1avs_A90 Troponin C; muscle contraction, calcium-activated, 91.18
1pva_A110 Parvalbumin; calcium binding; 1.65A {Esox lucius} 91.13
2kn2_A92 Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco 91.11
3li6_A66 Calcium-binding protein; calcium signaling protein 90.9
2pvb_A108 Protein (parvalbumin); calcium binding protein, me 90.89
1rwy_A109 Parvalbumin alpha; EF-hand, calcium-binding, calci 90.67
1wlz_A105 DJBP, CAP-binding protein complex interacting prot 90.64
1c7v_A81 CAVP, calcium vector protein; EF-hand family, calc 90.51
5pal_A109 Parvalbumin; calcium-binding protein; 1.54A {Triak 90.36
3h4s_E135 KCBP interacting Ca2+-binding protein; kinesin, mo 90.07
1y1x_A191 Leishmania major homolog of programmed cell death 90.01
1bu3_A109 Calcium-binding protein; 1.65A {Merluccius bilinea 89.98
1rro_A108 RAT oncomodulin; calcium-binding protein; 1.30A {R 89.7
1s6j_A87 CDPK, calcium-dependent protein kinase SK5; EF-han 89.61
1qx2_A76 Vitamin D-dependent calcium-binding protein, INTE; 89.24
2jq6_A139 EH domain-containing protein 1; metal binding prot 89.13
1eh2_A106 EPS15; calcium binding, signaling domain, NPF bind 88.75
3j04_B143 Myosin regulatory light chain 2, smooth muscle MA 88.53
1xk4_C113 Calgranulin B; S100 family, heterotetramer, metal 88.52
2obh_A143 Centrin-2; DNA repair complex EF hand superfamily 88.37
2wcb_A95 Protein S100-A12; calcium signalling, HOST-parasit 88.34
1k2h_A93 S100A1, S-100 protein, alpha chain; non-covalent h 88.11
2obh_A143 Centrin-2; DNA repair complex EF hand superfamily 87.8
2kax_A92 Protein S100-A5; EF-hand, calcium binding protien, 87.74
2jjz_A150 Ionized calcium-binding adapter molecule 2; EF-han 87.59
2lhi_A176 Calmodulin, serine/threonine-protein phosphatase c 87.41
3k21_A191 PFCDPK3, calcium-dependent protein kinase 3; calci 87.23
1j55_A95 S-100P protein; metal binding protein; 2.00A {Homo 87.19
3a8r_A179 Putative uncharacterized protein; EF-hand, membran 87.19
2y5i_A99 S100Z, S100 calcium binding protein Z; metal-bindi 87.16
1k8u_A90 S100A6, calcyclin, CACY; calcium regulatory protei 86.9
1m45_A148 MLC1P, myosin light chain; protein-peptide complex 86.64
3i5g_B153 Myosin regulatory light chain LC-2, mantle muscle; 86.55
2bl0_B145 Myosin regulatory light chain; muscle protein, sli 86.5
1wy9_A147 Allograft inflammatory factor 1; EF-hand, calucium 86.28
1snl_A103 Nucleobindin 1, calnuc; EF-hand, calcium-binding, 86.15
3akb_A166 Putative calcium binding protein; EF-hand, metal b 86.05
2ovk_C159 Myosin catalytic light chain LC-1, mantle muscle, 85.87
2mys_B166 Myosin; muscle protein, motor protein; HET: MLY; 2 85.85
1exr_A148 Calmodulin; high resolution, disorder, metal trans 85.72
2bl0_C142 Myosin regulatory light chain; muscle protein, sli 85.67
2l4h_A214 Calcium and integrin-binding protein 1; metal bind 85.55
2lhi_A176 Calmodulin, serine/threonine-protein phosphatase c 85.33
2znd_A172 Programmed cell death protein 6; penta-EF-hand pro 85.22
2lmt_A148 Calmodulin-related protein 97A; spermatogenesis, m 85.22
1cb1_A78 Calbindin D9K; calcium-binding protein; NMR {Sus s 85.03
2ccm_A191 Calexcitin; EF hand, calcium, signaling protein; 1 85.01
3qrx_A169 Centrin; calcium-binding, EF-hand, cell division, 84.95
3khe_A191 Calmodulin-like domain protein kinase isoform 3; c 84.81
2bl0_C142 Myosin regulatory light chain; muscle protein, sli 84.62
2ct9_A208 Calcium-binding protein P22; EF-hand, metal bindin 84.52
3u0k_A440 Rcamp; fluorescent protein, calcium binding, EF-ha 84.41
1nya_A176 Calerythrin; EF-hand, metal binding protein; NMR { 84.32
1xk4_A93 Calgranulin A; S100 family, heterotetramer, metal 84.25
3fwb_A161 Cell division control protein 31; gene gating, com 84.18
3mse_B180 Calcium-dependent protein kinase, putative; CDPKS, 84.08
3qrx_A169 Centrin; calcium-binding, EF-hand, cell division, 83.97
3ox6_A153 Calcium-binding protein 1; EF-hand, calcium-sensor 83.95
2f2o_A179 Calmodulin fused with calmodulin-binding domain of 83.87
2ggz_A211 Guanylyl cyclase-activating protein 3; EF hand, gu 83.85
2kyc_A108 Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p 83.61
3e3r_A204 Calcyphosin, calcyphosine; human calcyphosine, EF- 83.6
3sjs_A220 URE3-BP sequence specific DNA binding protein; EF- 83.56
1q80_A174 SCP, sarcoplasmic calcium-binding protein; all-alp 83.38
3ox6_A153 Calcium-binding protein 1; EF-hand, calcium-sensor 83.36
1jba_A204 GCAP-2, protein (guanylate cyclase activating prot 83.29
2ovk_B153 RLC, myosin regulatory light chain LC-2, mantle mu 83.29
1wdc_C156 Scallop myosin; calcium binding protein, muscle pr 83.27
1ggw_A140 Protein (CDC4P); light chain, cytokinesis, cell cy 83.22
2h2k_A106 Protein S100-A13; calcium binding protein, metal b 83.04
2r2i_A198 Guanylyl cyclase-activating protein 1; EF hand, GC 83.02
2hpk_A208 Photoprotein berovin; structural genomics, PSI, pr 82.94
1qls_A99 S100C protein, calgizzarin; metal-binding protein/ 82.87
1top_A162 Troponin C; contractIle system protein; 1.78A {Gal 82.84
3fwb_A161 Cell division control protein 31; gene gating, com 82.79
2bec_A202 Calcineurin B homologous protein 2; calcineurin-ho 82.75
2sas_A185 Sarcoplasmic calcium-binding protein; 2.40A {Branc 82.5
1exr_A148 Calmodulin; high resolution, disorder, metal trans 82.36
3ll8_B155 Calcineurin subunit B type 1; protein-peptide dock 82.31
1jfj_A134 Ehcabp, calcium-binding protein; EF-hand, helix-lo 82.28
4ds7_A147 Calmodulin, CAM; protein binding, metal binding, s 82.28
1wdc_B156 Scallop myosin; calcium binding protein, muscle pr 82.26
2jnf_A158 Troponin C; stretch activated muscle contraction, 82.23
2jnf_A158 Troponin C; stretch activated muscle contraction, 81.94
1bjf_A193 Neurocalcin delta; calcium-binding, myristoylation 81.88
3i5g_C159 Myosin catalytic light chain LC-1, mantle muscle; 81.85
1dtl_A161 Cardiac troponin C; helix-turn-helix, structural p 81.82
3mse_B180 Calcium-dependent protein kinase, putative; CDPKS, 81.81
1dtl_A161 Cardiac troponin C; helix-turn-helix, structural p 81.54
1y1x_A191 Leishmania major homolog of programmed cell death 81.43
2f2o_A179 Calmodulin fused with calmodulin-binding domain of 81.38
1jba_A204 GCAP-2, protein (guanylate cyclase activating prot 81.24
2f33_A263 Calbindin; EF-hand, Ca2+-binding, metal binding pr 81.21
2mys_C149 Myosin; muscle protein, motor protein; HET: MLY; 2 81.04
1juo_A198 Sorcin; calcium-binding proteins, penta-EF-hand, P 80.99
1s6c_A183 KV4 potassium channel-interacting protein kchip1B; 80.98
3pm8_A197 PFCDPK2, calcium-dependent protein kinase 2; malar 80.84
2l2e_A190 Calcium-binding protein NCS-1; NCS1P, myristoylate 80.65
1psr_A100 Psoriasin, S100A7; EF-hand protein, MAD phasing, p 80.51
3k21_A191 PFCDPK3, calcium-dependent protein kinase 3; calci 80.19
>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Back     alignment and structure
Probab=100.00  E-value=3.6e-36  Score=308.78  Aligned_cols=293  Identities=17%  Similarity=0.229  Sum_probs=234.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcccceeeccccCChhHHHHHHHHhcCCCcccccccceeeehhhhhH
Q 042300           79 NVFLIAVYGYLMLLAAKLLSNGSEILLQIIG--PGIIGGLFLPVLSSVPDAAIILASGLSGSKETAQNQVSVGMGLLAGS  156 (520)
Q Consensus        79 ~~fL~~v~~~lL~~~A~lls~gse~La~~lg--~giiGgll~~~lgslPElii~lva~l~gs~e~Aq~~v~v~~G~l~GS  156 (520)
                      +++++++...+++++|+++++++|.+++++|  |.++|.++.+++||+||+++++.|..       +++.++++||++||
T Consensus         5 ~~~~l~~g~~~l~~~a~~lv~~~~~la~~lgis~~viGltiva~GTSlPEl~vsi~A~~-------~g~~diaiGnivGS   77 (320)
T 3v5u_A            5 GVGYFLLGLILLYYGSDWFVLGSERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASY-------MHAPGISIGNAIGS   77 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCHHHHHHTHHHHHHHHHHHHHHHHHHH-------TTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHcccHHHHHHHHHHh-------CCCCceeeeeecch
Confidence            4566777778999999999999999999999  78889999999999999999999999       56667889999999


Q ss_pred             HHHHHHHHHHHHHHhccccccCcccccCcceeeeeccCcccccccchhhhhHHHHHHHHHHHHHhhhhhhcccccccccc
Q 042300          157 TVMLLTVLWGSCLLVGKCDIEGTTAVDLKDTKRFSLTGSGVSTDVWTCYAARIMVLSIVPFIIVQLPQVLNTTSISRVTV  236 (520)
Q Consensus       157 ~i~nLtLi~G~~~ivG~~~~~~~~~~~~~~~~~f~~~~t~v~~d~~~~~~a~im~ls~l~llivqlP~~~~~~~~~~~~~  236 (520)
                      |++|+++++|+|.++++.+. +         +.             .+++..+|+++++.++.  +  .+        ..
T Consensus        78 ni~nillvlG~~~li~p~~v-~---------~~-------------~~~d~~~~l~~~~~l~~--~--~~--------~g  122 (320)
T 3v5u_A           78 CICNIGLVLGLSAIISPIIV-D---------KN-------------LQKNILVYLLFVIFAAV--I--GI--------DG  122 (320)
T ss_dssp             HHHHHHTHHHHHHHHSCBCC-C---------HH-------------HHHHHHHHHHHHHHHHH--H--TT--------TC
T ss_pred             HHHHHHHHHHHHHHHccccc-c---------HH-------------HHHHHHHHHHHHHHHHH--H--HH--------cc
Confidence            99999999999999998873 1         11             12456677666654432  1  11        12


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhhHhhhhhhhhhcccCccccCCCCCchHHHHhhhhhcccccCCcc
Q 042300          237 LISLIVSISLVIAYSIYQVFQPWIQKRRIEYAKQKQLISGILKLVKTHSLGRLFTDDGEPNIDVIQKLFNIIDENADGCL  316 (520)
Q Consensus       237 ~is~ivsivlLi~Y~~Yl~f~~~~q~~rl~~~~~~~~~~~~~~h~~~~~~~~l~~~~g~~~~~~~~~lF~~~d~~~d~~i  316 (520)
                       +++..+++++..|+.|++|+.+.+                 ++           +                 ++++   
T Consensus       123 -is~~~g~~Ll~~Y~~yl~~~~~~~-----------------~~-----------~-----------------~~~~---  153 (320)
T 3v5u_A          123 -FSWIDGVVLLILFIIYLRWTVKNG-----------------SA-----------E-----------------IEEN---  153 (320)
T ss_dssp             -BCHHHHHHHHHHHHHHHHHHHHHT-----------------BC------------------------------------
T ss_pred             -cHHHHHHHHHHHHHHHHHHHHHhc-----------------cc-----------c-----------------cccc---
Confidence             789999999999999999987721                 10           0                 0000   


Q ss_pred             cHHHHHHHHhcccccccccchhHHHHHHHhhhccccccccCCCCCCcccccchhHHHHHHHHHHHHHHHHchHHhHhhHH
Q 042300          317 SAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSWTPRLINDFQEVSVSILLMGTIVAAVCSDPLVDAVD  396 (520)
Q Consensus       317 ~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~i~~~~~~~~~~~~~~~~~~~ai~~Lllg~~lv~~~A~~lV~si~  396 (520)
                        +|               + ++ .+.                           ++++.++++|.+++.++||++|++++
T Consensus       154 --~~---------------~-~~-~~~---------------------------~~~~~~l~~~l~~l~~~a~~lv~~~~  187 (320)
T 3v5u_A          154 --ND---------------K-NN-PSV---------------------------VFSLVLLIIGLIGVLVGAELFVDGAK  187 (320)
T ss_dssp             -------------------C-CC-HHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --cc---------------c-cc-ccH---------------------------HHHHHHHHHHHHHHHHHHHhccccHH
Confidence              00               0 00 010                           45788899999999999999999999


Q ss_pred             HHHhhcCCCcchhhhhhhhhhc-chhHHHHHHHHHhCCCccccccccchhhhHHHhhHHHHHHHHHHhhcccccccchhh
Q 042300          397 NFSTASNIPSLFVAFIILPFAT-SSEAVSALIFASRKRSRTSSLTYSAIYGSVTMSNILSLSVFLSLVYFRHLTWNFSAE  475 (520)
Q Consensus       397 ~~s~~~gIs~~fIg~iivPlat-~~E~vsAI~~A~k~k~~~aslt~s~iygav~mnn~l~l~v~l~lv~~r~l~w~fs~E  475 (520)
                      .+++.+|+|+.++|++++|++| +||+++|+.+|+|||.|++   ++|+.|++..|.++++++...   .+|++.+ ..|
T Consensus       188 ~ia~~~gis~~~iGltlva~gtslPE~~~sv~aa~~g~~~la---ig~iiGS~ifn~~~v~g~~~l---i~p~~~~-~~d  260 (320)
T 3v5u_A          188 KIALALDISDKVIGFTLVAFGTSLPELMVSLAAAKRNLGGMV---LGNVIGSNIADIGGALAVGSL---FMHLPAE-NVQ  260 (320)
T ss_dssp             HHHHHTTCCCHHHHHHTHHHHHTHHHHHHHHHHHHTTCHHHH---HHHHHHHHHHHHHTHHHHHHH---HSCBCCC-HHH
T ss_pred             HHHHHhCCchHHHHHHHHHHHhccHHHHHHHHHHHcCCCcHH---HHHHHhHHHHHHHHHHHHHHh---hccccch-HHH
Confidence            9999999999999999999999 9999999999999999998   999999999999999887532   2455555 448


Q ss_pred             HHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHH-HHHHHH
Q 042300          476 VSVILLVCILMGLIASFRTTFPLWMCLVACMLYPF-SLLLLY  516 (520)
Q Consensus       476 vlvillv~~~vg~~~~~r~t~~~~~g~~~~~lY~~-sl~lv~  516 (520)
                      ..+++++++++.. ..++++.+||+|.+++++|.. ++..++
T Consensus       261 ~~~~l~~~~ll~~-~~~~~~i~~~eG~~ll~~Y~~~y~~~~~  301 (320)
T 3v5u_A          261 MAVLVIMSLLLYL-FAKYSKIGRWQGILFLALYIIAIASLRM  301 (320)
T ss_dssp             HHHHHHHHHHHHH-HHHHSCBSHHHHHHHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHHHH-HHhCCcCcHHHHHHHHHHHHHHHHHHHH
Confidence            8888777777665 346788999999999999999 876543
>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Back     alignment and structure
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} Back     alignment and structure
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Back     alignment and structure
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Back     alignment and structure
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Back     alignment and structure
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Back     alignment and structure
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Back     alignment and structure
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Back     alignment and structure
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Back     alignment and structure
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Back     alignment and structure
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Back     alignment and structure
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Back     alignment and structure
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Back     alignment and structure
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A Back     alignment and structure
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Back     alignment and structure
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} Back     alignment and structure
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Back     alignment and structure
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Back     alignment and structure
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Back     alignment and structure
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A Back     alignment and structure
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A Back     alignment and structure
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Back     alignment and structure
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Back     alignment and structure
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Back     alignment and structure
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Back     alignment and structure
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A Back     alignment and structure
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Back     alignment and structure
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Back     alignment and structure
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Back     alignment and structure
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Back     alignment and structure
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Back     alignment and structure
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Back     alignment and structure
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Back     alignment and structure
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Back     alignment and structure
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Back     alignment and structure
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Back     alignment and structure
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Back     alignment and structure
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Back     alignment and structure
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Back     alignment and structure
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Back     alignment and structure
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Back     alignment and structure
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A Back     alignment and structure
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Back     alignment and structure
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Back     alignment and structure
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* Back     alignment and structure
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Back     alignment and structure
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Back     alignment and structure
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Back     alignment and structure
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Back     alignment and structure
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Back     alignment and structure
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Back     alignment and structure
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} Back     alignment and structure
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Back     alignment and structure
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Back     alignment and structure
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Back     alignment and structure
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} Back     alignment and structure
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Back     alignment and structure
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Back     alignment and structure
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B Back     alignment and structure
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Back     alignment and structure
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Back     alignment and structure
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Back     alignment and structure
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Back     alignment and structure
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Back     alignment and structure
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Back     alignment and structure
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Back     alignment and structure
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Back     alignment and structure
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} Back     alignment and structure
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Back     alignment and structure
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A Back     alignment and structure
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Back     alignment and structure
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Back     alignment and structure
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Back     alignment and structure
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Back     alignment and structure
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Back     alignment and structure
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Back     alignment and structure
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} Back     alignment and structure
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Back     alignment and structure
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Back     alignment and structure
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A Back     alignment and structure
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Back     alignment and structure
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Back     alignment and structure
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Back     alignment and structure
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Back     alignment and structure
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Back     alignment and structure
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Back     alignment and structure
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Back     alignment and structure
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Back     alignment and structure
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Back     alignment and structure
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Back     alignment and structure
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Back     alignment and structure
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Back     alignment and structure
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Back     alignment and structure
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A Back     alignment and structure
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Back     alignment and structure
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Back     alignment and structure
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A Back     alignment and structure
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Back     alignment and structure
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A Back     alignment and structure
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Back     alignment and structure
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Back     alignment and structure
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Back     alignment and structure
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Back     alignment and structure
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Back     alignment and structure
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A Back     alignment and structure
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Back     alignment and structure
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Back     alignment and structure
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Back     alignment and structure
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Back     alignment and structure
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C Back     alignment and structure
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Back     alignment and structure
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Back     alignment and structure
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Back     alignment and structure
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Back     alignment and structure
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Back     alignment and structure
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Back     alignment and structure
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Back     alignment and structure
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Back     alignment and structure
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Back     alignment and structure
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Back     alignment and structure
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Back     alignment and structure
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Back     alignment and structure
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A Back     alignment and structure
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 520
d1ij5a_321 a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind 9e-05
d1uhka1187 a.39.1.5 (A:3-189) Calcium-regulated photoprotein 0.001
d1fi5a_81 a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), 0.002
d1jc2a_75 a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) 0.002
d1c7va_68 a.39.1.5 (A:) Calcium vector protein {Amphioxus (B 0.002
d1tiza_67 a.39.1.5 (A:) Calmodulin-related protein T21P5.17 0.003
>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 Back     information, alignment and structure

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 42.3 bits (98), Expect = 9e-05
 Identities = 16/117 (13%), Positives = 43/117 (36%), Gaps = 8/117 (6%)

Query: 253 YQVFQPWIQKRRIEY---AKQKQLISGILKLVKTHSLGRLFTDDGEP-----NIDVIQKL 304
           +   +   ++R       A +KQ ++ +LK ++  + G       +P     + +++++L
Sbjct: 68  FDARERAEREREAARGDAAAEKQRLASLLKDLEDDASGYNRLRPSKPMLSEEDTNILRQL 127

Query: 305 FNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSAIQRHDDGSW 361
           F     +  G  S ++L+ ++        +  + +L     N  K            
Sbjct: 128 FLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVA 184
>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 Back     information, alignment and structure
>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 Back     information, alignment and structure
>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 Back     information, alignment and structure
>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 Back     information, alignment and structure
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query520
d1c7va_68 Calcium vector protein {Amphioxus (Branchiostoma l 95.62
d1fw4a_65 Calmodulin {Cow (Bos taurus) [TaxId: 9913]} 95.41
d1tiza_67 Calmodulin-related protein T21P5.17 {Thale cress ( 95.36
d2opoa181 Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta 95.24
d2hf5a133 Troponin C {Human (Homo sapiens), cardiac isoform 95.06
d2fcea161 Calmodulin {Cow (Bos taurus) [TaxId: 9913]} 95.05
d1pvaa_109 Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} 95.02
d1oqpa_77 Caltractin (centrin 2) {Green algae (Chlamydomonas 94.96
d1fi5a_81 Troponin C {Chicken (Gallus gallus), cardiac isofo 94.95
d1rroa_108 Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 94.88
d5pala_109 Parvalbumin {Leopard shark (Triakis semifasciata) 94.78
d1jc2a_75 Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} 94.52
d1f54a_77 Calmodulin {Baker's yeast (Saccharomyces cerevisia 94.14
d2pvba_107 Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} 94.08
d1rwya_109 Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} 94.02
d1avsa_81 Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} 93.98
d1a4pa_92 Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 93.29
d1wrka182 Troponin C {Human (Homo sapiens), cardiac isoform 93.21
d2pq3a173 Calmodulin {Rattus norvegicus [TaxId: 10116]} 92.83
d1s6ja_87 Calcium-dependent protein kinase sk5 CLD {Soybean 92.51
d1hqva_181 Apoptosis-linked protein alg-2 {Mouse (Mus musculu 92.45
d1qx2a_76 Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} 91.74
d1zfsa193 Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 91.32
d1c07a_95 Eps15 {Human (Homo sapiens) [TaxId: 9606]} 91.24
d1wlza183 DJ-1-binding protein, DJBP {Human (Homo sapiens) [ 90.32
d1fi6a_92 Reps1 {Mouse (Mus musculus) [TaxId: 10090]} 89.9
d2sasa_185 Sarcoplasmic calcium-binding protein {Amphioxus (B 88.93
d1ctda_34 Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} 88.79
d1snla_99 Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax 88.54
d1ksoa_93 Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta 88.51
d1cb1a_78 Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} 88.38
d2jxca195 Eps15 {Human (Homo sapiens) [TaxId: 9606]} 88.26
d1k94a_165 Grancalcin {Human (Homo sapiens) [TaxId: 9606]} 87.68
d1nyaa_176 Calerythrin {Saccharopolyspora erythraea [TaxId: 1 87.64
d1exra_146 Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI 86.4
d1wdcb_142 Myosin Essential Chain {Bay scallop (Aequipecten i 86.37
d1y1xa_182 Programmed cell death 6 protein-like protein {Leis 86.3
d1m45a_146 Myosin Light Chain Mlc1p {Baker's yeast (Saccharom 86.22
d1jfja_134 EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 86.11
d1qv0a_189 Calcium-regulated photoprotein {Hydrozoa (Obelia l 85.75
d1qjta_99 Eps15 {Mouse (Mus musculus) [TaxId: 10090]} 84.69
d1topa_162 Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} 83.79
d2scpa_174 Sarcoplasmic calcium-binding protein {Sandworm (Ne 83.67
d1uhka1187 Calcium-regulated photoprotein {Jellyfish (Aequore 83.61
d1iq3a_110 Pob1 {Human (Homo sapiens) [TaxId: 9606]} 83.33
d1yuta198 Calcyclin (S100) {Human (Homo sapiens), s100a13 [T 83.03
d1ggwa_140 Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ 82.87
d3c1va193 Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta 82.64
d2obha1141 Calmodulin {Human (Homo sapiens) [TaxId: 9606]} 82.61
d1psra_100 Calcyclin (S100) {Human (Homo sapiens), psoriasin 82.48
d1g8ia_187 Frequenin (neuronal calcium sensor 1) {Human (Homo 82.3
d1jfja_134 EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 82.27
d1fpwa_190 Frequenin (neuronal calcium sensor 1) {Baker's yea 81.58
d2mysc_145 Myosin Regulatory Chain {Chicken (Gallus gallus) [ 81.51
d1dtla_156 Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} 81.33
d1wdcc_152 Myosin Regulatory Chain {Bay scallop (Aequipecten 80.78
d1lkja_146 Calmodulin {Baker's yeast (Saccharomyces cerevisia 80.54
d1k8ua_89 Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta 80.25
>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Back     information, alignment and structure
class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=95.62  E-value=0.0043  Score=46.71  Aligned_cols=51  Identities=18%  Similarity=0.369  Sum_probs=41.3

Q ss_pred             HHHHhhhhhcccccCCcccHHHHHHHHhcccccccccchhHHHHHHHhhhcccc
Q 042300          299 DVIQKLFNIIDENADGCLSAKELRALVIGIQFEDIDMNIDELLKKWLNRLKHSA  352 (520)
Q Consensus       299 ~~~~~lF~~~d~~~d~~i~~~El~~l~~~~~~~~~~~~~~~~~~~~m~~fd~~~  352 (520)
                      +.+++.|+.+|.|++|.|+.+|++..+..++....   .+++++.+++.+|.++
T Consensus         2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~---s~~e~~~~~~~~D~d~   52 (68)
T d1c7va_           2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPL---TDAEVEEAMKEADEDG   52 (68)
T ss_dssp             HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCC---CHHHHHHHHHHHCSSG
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCC---CHHHHHHHHHHhCCCC
Confidence            46889999999999999999999998877664321   2456788999998887
>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Back     information, alignment and structure
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Back     information, alignment and structure
>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Back     information, alignment and structure
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Back     information, alignment and structure
>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Back     information, alignment and structure
>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Back     information, alignment and structure
>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Back     information, alignment and structure
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Back     information, alignment and structure
>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Back     information, alignment and structure
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Back     information, alignment and structure
>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Back     information, alignment and structure
>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Back     information, alignment and structure
>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Back     information, alignment and structure
>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Back     information, alignment and structure
>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Back     information, alignment and structure
>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Back     information, alignment and structure
>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Back     information, alignment and structure
>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Back     information, alignment and structure
>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Back     information, alignment and structure
>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Back     information, alignment and structure
>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Back     information, alignment and structure
>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Back     information, alignment and structure
>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Back     information, alignment and structure