Citrus Sinensis ID: 042381

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350---
Protein Sequence
MASSCSECWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVNYQLFSNASKALRRSGFNIIATLLQVSPEIFLSSHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRDSRTS
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHcccccccccccEEEEEEccHHHHcccccHHHHHHHHHHHcccccccHHHHccccccccccccccccEEEEEEEEccccEEEEEEEEEccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHccccHHHHHHHHHccccccccHHHHHccccccEEccccccEEEEEEEcccccccEEEccEEEEcccEEEcccEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHccHHHHcccccEEEEcccHHHHHccccccccHHHHHHHHcccccccHHHHHHcccccEccccccccEEEEEEccccccEEEEccEEEcccccEcccEEEEEEcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEEccccHHHEccccccHHHHEEEEEccccccHHHHHHcccccEccccccccEEEEEccccccccEEEccEEEEcccEEEccEEEEEcccHHHHccccc
Coil and Loop (DISEMBL)
MASSCSECWRALAFFTISVVLACMAISMslhaipkdngspstkpvnyQLFSNASKALRRSGFNIIATLLQvspeiflsshnstifaiqdsaisntslppWLFKKLLQYHtsplklsmndllmkpqgsclptflhqKKVAITKIVVKERLIEINNvlvsrpdiflegslsihgvlepfssldpqnihpgwdyiqspicdsfsstlvsditesknMVNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEdninlnsttifapadfavvasssplLDRIVRLhilpqrftykelaslpgktllktlvpnqylvisggadfiqgfdingvqifapeifsskQFVIHGISQAFRDSRTS
Flexible Loop (DISEMBL)
MASSCSECWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVNYQLFSNASKALRRSGFNIIATLLQVSPEIFLSSHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRDSRTS
Low Complexity Region (SEG)
MASSCSECWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVNYQLFSNASKALRRSGFNIIATLLQVSPEIFLSSHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRDSRTS
Disordered region (IsUnstruct)
*****SECWRALAFFTISVVLACMAISMSLHAI************NYQLFSNASKALRRSGFNIIATLLQVSPEIFLSSHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQ********
Disordered Region (DISOPRED)
********WRALAFFTISVVLACMAI***********************FSNASKALRRSGFNIIATLLQVSPEIFLSSHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHP*W*YIQSPIC***********TESKNMVNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRD****
Disordered Region (DISEMBL)
MASSCSECWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVNYQLFSNASKALRRSGFNIIATLLQVSPEIFLSSHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRDSRTS
Disordered Region (DISPRO)
***SCSECWRALAFFTISVVLACMAISMSL************KPVNYQLFSNASKALRRSGFNIIATLLQVSPEIFLSSHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRD****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASSCSECWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVNYQLFSNASKALRRSGFNIIATLLQVSPEIFLSSHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRDSRTS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	353	2.2.26 [Sep-21-2011]
Q9FL53	353	Fasciclin-like arabinogal	yes	no	0.943	0.943	0.467	8e-76
Q9FGW0	424	Putative fasciclin-like a	no	no	0.716	0.596	0.256	2e-09
Q5Q0H2	248	Fasciclin-like arabinogal	no	no	0.365	0.520	0.274	2e-07

>sp|Q9FL53|FLA21_ARATH Fasciclin-like arabinogalactan protein 21 OS=Arabidopsis thaliana GN=FLA21 PE=2 SV=1

 Score =  284 bits (726), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 227/364 (62%), Gaps = 31/364 (8%)

Query: 1   MASSCSECWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVNYQLFS-----NASK 55
           M    S+C+    +F +S+ LA MAIS +L + P    S  T P+ +   S     NAS 
Sbjct: 1   MGCCSSDCF---VYFILSIALAFMAISTTLRSPPD---SEPTIPIAFSSSSPSLSLNASN 54

Query: 56  ALRRSGFNIIATLLQVSPEIFLSSH-NSTIFAIQDSAISNTS-LPPWLFKKLLQYHTSPL 113
            LR+S F  IATLL +SPEIFLSS  N+T+FAI+D++  NTS L P   K+LL YHT PL
Sbjct: 55  TLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLHYHTLPL 114

Query: 114 KLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGV 173
            LSM+DLL KPQG+CLPT LH K V I+ +  + R  E+N+V ++ PD+FL  SL IHGV
Sbjct: 115 MLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLGDSLVIHGV 174

Query: 174 LEPFSSLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSF 233
           + PFS L P + H     I +P+C S ++   S+  E    + +WT+I++LLSSNGFV F
Sbjct: 175 IGPFSPLQPHSDH----LIHTPLCQSDTTNKTSNNEEVPVSI-DWTRIVQLLSSNGFVPF 229

Query: 234 AIGLHSVIDQILED---NINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKEL 290
           AIGLHSV+++I+ D   + NL   TI A  +   ++S+SP L  +VR HIL QR TYK+ 
Sbjct: 230 AIGLHSVLNRIVNDHNHHKNLTGVTILATPNLVSLSSASPFLYEVVRHHILVQRLTYKDF 289

Query: 291 ASLPGKTLLKTLVPNQYLVI------SGGADFIQGFDINGVQIFAPEIFSSKQFVIHGIS 344
           AS+  K  +KTL P Q L I      S G DF+    I+GV+I  P++FSS  FVIHGIS
Sbjct: 290 ASMSDKATVKTLDPYQDLTITRRNVNSSGGDFM----ISGVEIVDPDMFSSSNFVIHGIS 345

Query: 345 QAFR 348
               
Sbjct: 346 HTLE 349

May be a cell surface adhesion protein.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FGW0|FLA20_ARATH Putative fasciclin-like arabinogalactan protein 20 OS=Arabidopsis thaliana GN=FLA20 PE=3 SV=1

 Score = 63.9 bits (154), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 36/289 (12%)

Query: 83  TIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMNDLLMKPQGSCLPTFLHQKKVAITK 142
           T+FA  D + S    P  L    ++Y  SP +L    L   P G+ +PT      + +T 
Sbjct: 104 TLFAPSDQSFSKFGQPSLL---DMKYQLSPTRLPGETLRNLPNGAKIPTLRSNYSLTVTN 160

Query: 143 IVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHPGWDYIQ--------- 193
                    INNV+V    +F +G + I+G  E F+S    +                  
Sbjct: 161 SSRFGGKTSINNVVVQDSPVFDDGYVVIYGSDEFFTSPTKISDDSSSSSSIPSTTSSTGS 220

Query: 194 ------------SPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLHSVI 241
                       SP   S S+  + + ++  N  N +    RLL S GFV  A    + +
Sbjct: 221 IPIPSSATQTPPSPNIASDSTRNLPNRSKPVNRFNIFESASRLLMSRGFVIIA----TFL 276

Query: 242 DQILEDNINLNST--TIFAPADFAVVASSSPLLD--RIVRLHILPQRFTYKELASLPGK- 296
              LEDN + N T  T+FAP D A+   ++   D   I R H++ Q   +K+L     + 
Sbjct: 277 ALQLEDNTSGNDTKITVFAPIDEAIPNPTTKFSDYVTIFRGHVVSQLLLWKDLQKFAKEG 336

Query: 297 TLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQ 345
           ++L+T++    + IS   D +    +NGV +  P+++ +    +HG +Q
Sbjct: 337 SILQTVLKGYEIEISLSGDILL---LNGVPLIYPDLYVNDWIAVHGFNQ 382

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5Q0H2|FLA19_ARATH Fasciclin-like arabinogalactan protein 19 OS=Arabidopsis thaliana GN=FLA19 PE=2 SV=2

 Score = 57.0 bits (136), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 215 VNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAV----VASSSP 270
           + E  + I +L   G   FA  +  +   +L D ++  S T+FAP D  +    +  S P
Sbjct: 32  LEELERAIAILRVRGRALFANAI--ITSDLLFDLLSDESLTLFAPTDSMLFDLDMTHSLP 89

Query: 271 LLDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAP 330
                +RLH +P R +   L SLP  + L TL+P+  L+++  +       ++GVQ+  P
Sbjct: 90  FYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTKHSSSNDSIFLDGVQLLIP 149

Query: 331 EIFSSKQFVIHGISQ 345
            +F  +   +HG++ 
Sbjct: 150 GLFDGQHIAVHGLAD 164

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
224126887	353	predicted protein [Populus trichocarpa]	0.980	0.980	0.584	1e-111
225447417	354	PREDICTED: fasciclin-like arabinogalacta	0.968	0.966	0.579	1e-103
449453662	358	PREDICTED: fasciclin-like arabinogalacta	0.968	0.955	0.566	1e-100
255563403	378	conserved hypothetical protein [Ricinus	0.759	0.708	0.614	1e-84
357453567	354	Fasciclin-like arabinogalactan protein [	0.974	0.971	0.485	3e-84
356547049	379	PREDICTED: fasciclin-like arabinogalacta	0.946	0.881	0.463	2e-75
15240213	353	FASCICLIN-like arabinogalactan protein 2	0.943	0.943	0.467	5e-74
297806713	641	hypothetical protein ARALYDRAFT_349957 [	0.937	0.516	0.462	2e-69
224146654	167	predicted protein [Populus trichocarpa]	0.393	0.832	0.568	6e-36
357444555	340	Fasciclin-like arabinogalactan protein [	0.776	0.805	0.277	2e-18

>gi|224126887|ref|XP_002319951.1| predicted protein [Populus trichocarpa] gi|222858327|gb|EEE95874.1| predicted protein [Populus trichocarpa]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 204/349 (58%), Positives = 268/349 (76%), Gaps = 3/349 (0%)

Query: 3   SSCSECWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVNYQLFSNASKALRRSGF 62
           +SCS  W A  +F  S VLA +AIS ++++ P +N +  T+P +  L  NAS+ LR SGF
Sbjct: 2   ASCSHWWHAPVYFIASAVLAFIAISTAMNS-PSNNATRPTRPTSNYLSLNASRTLRESGF 60

Query: 63  NIIATLLQVSPEIFLSSHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMNDLLM 122
           NI+ATLL +SPE+F  S N+TIFAI+DS++ NTSLPPW  K LLQYHTSPLKLSM D+  
Sbjct: 61  NIMATLLLISPEMFFLSPNTTIFAIKDSSLVNTSLPPWFLKNLLQYHTSPLKLSMEDVFK 120

Query: 123 KPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSLDP 182
           KPQGSC PT + +KK+A+TKI  KERL EIN+VLVS PD+ LE  ++IHGVL PFSSL  
Sbjct: 121 KPQGSCFPTLVDRKKLAVTKIDAKERLAEINHVLVSHPDMVLERRITIHGVLAPFSSLRS 180

Query: 183 QNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLHSVID 242
           ++++ GW+ IQ+PICD+ +S+LVSD      ++ EWT+II LLSS+ FVSFAIGL+SV+D
Sbjct: 181 KDVYFGWESIQAPICDA-NSSLVSD-ANGPRIILEWTRIIHLLSSHRFVSFAIGLNSVLD 238

Query: 243 QILEDNINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGKTLLKTL 302
           +IL D+ NL+S TIFAP +   VASSSP+L++IVRLHILPQR TY ELA+LP K  L+TL
Sbjct: 239 RILADHKNLSSVTIFAPPELEFVASSSPMLEKIVRLHILPQRATYIELAALPDKQRLRTL 298

Query: 303 VPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRDSR 351
           +P++ L I+ G    QG  INGV+I APEIFSSK+F++HGI+QAF+ ++
Sbjct: 299 LPDEDLKITKGVGVTQGLAINGVEIAAPEIFSSKEFIVHGITQAFKIAK 347

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447417|ref|XP_002276175.1| PREDICTED: fasciclin-like arabinogalactan protein 21-like [Vitis vinifera]

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/352 (57%), Positives = 255/352 (72%), Gaps = 10/352 (2%)

Query: 1   MASSCSECWRALAFFTISVVLACMAISMSLHAIPKDNGSPS-TKPVNYQLFSNASKALRR 59
           M  SCS  W A  +FTIS+ LA +AIS  LH+  K+  SP  +  + + L SNAS+ALRR
Sbjct: 1   MGRSCSHWWHAPVYFTISIALAFIAISTPLHSNLKNAASPPPSNSITHHLLSNASRALRR 60

Query: 60  SGFNIIATLLQVSPEIFLSSHNS-TIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMN 118
           SGF +IATLLQVSPE+FLSSH   TIFAI+DSAISN SLPPWL K L  YHTSP KLSM+
Sbjct: 61  SGFTVIATLLQVSPELFLSSHEYFTIFAIKDSAISNFSLPPWLMKHLFHYHTSPSKLSMH 120

Query: 119 DLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFS 178
           DLL KP GSCL T L  KK++ITK    +R +EIN+VLVS PD+FL G +S+HGVL PFS
Sbjct: 121 DLLEKPPGSCLSTLLQHKKLSITKTDATQRSVEINHVLVSHPDVFLGGPISVHGVLGPFS 180

Query: 179 SLDPQNIHPG-WDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGL 237
            L+PQ+     W  IQ+PIC S SS     + E +N+V EW KIIR+LSSNGFVSFA+GL
Sbjct: 181 PLNPQDFQESQWGSIQTPICGSNSS-----VVEFRNLV-EWPKIIRMLSSNGFVSFAVGL 234

Query: 238 HSVIDQILEDNINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGKT 297
           H+V+  + +D  +L+  TIFAP D A+ AS SPLLDRIVR HILP+R +Y ELASLP K 
Sbjct: 235 HTVLGGVAQDFTSLSCATIFAPPDLALSASPSPLLDRIVRFHILPRRLSYIELASLPQKA 294

Query: 298 LLKTLVPNQYLVISGGA-DFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFR 348
            + TL+P++ L ++G   +  Q   INGV I AP++FSSK+F+IH IS+AF+
Sbjct: 295 KIGTLLPDRDLEVTGRVKNSSQVLVINGVDIVAPDVFSSKKFIIHVISRAFK 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453662|ref|XP_004144575.1| PREDICTED: fasciclin-like arabinogalactan protein 21-like [Cucumis sativus]

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/355 (56%), Positives = 253/355 (71%), Gaps = 13/355 (3%)

Query: 1   MASSCSECWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVNYQLFSNASKALRRS 60
           MA    E W AL     SVVLA  AIS +LH+    + +P  K +   L  NAS+ALRR+
Sbjct: 1   MAKCSFEWWHAL-----SVVLAFFAISTALHSSTSHSPTPPNKSMADDLSLNASRALRRA 55

Query: 61  GFNIIATLLQVSPEIFLSSHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMNDL 120
           GFN IATLLQVSPE F S  NSTIFAI+DSAISNTSLPPWL K L+QYHTSP+KLSM DL
Sbjct: 56  GFNTIATLLQVSPEHFFSPQNSTIFAIKDSAISNTSLPPWLLKNLVQYHTSPVKLSMADL 115

Query: 121 LMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSL 180
           L KP+G CLPT L  KK+AITK+    RL+EIN+VLV+ PDIFL G++SIHGVL PFS L
Sbjct: 116 LKKPRGVCLPTLLMPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 175

Query: 181 DPQNIHPGWDYIQSPICDSFSSTLVSDITESKN------MVNEWTKIIRLLSSNGFVSFA 234
           DP ++  GW +IQSP CD+ ++T++SD  E+ N      +  EW +IIR LS+NGF+S+A
Sbjct: 176 DPLDLRQGWSFIQSPYCDT-NATMISDPFETNNGVVGVGVEVEWRRIIRWLSANGFISYA 234

Query: 235 IGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLP 294
           IGL +V++ +L+D   L S T+FAP + + VAS SP+L+R VRLHI+PQ  TYK LASLP
Sbjct: 235 IGLQTVLEGLLQDFEGLRSITVFAPPNLSSVASPSPVLNRAVRLHIVPQMVTYKSLASLP 294

Query: 295 GKTLLKTLVPNQYLVISGGADFIQG-FDINGVQIFAPEIFSSKQFVIHGISQAFR 348
            +T LKTLV  Q + I GG    +G   +NGV+I +PEIF S+  VIHGIS++  
Sbjct: 295 TRTSLKTLVSGQDIEILGGVRVPRGTVKVNGVEIVSPEIFRSENCVIHGISRSLE 349

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563403|ref|XP_002522704.1| conserved hypothetical protein [Ricinus communis] gi|223538054|gb|EEF39666.1| conserved hypothetical protein [Ricinus communis]

 Score =  320 bits (819), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 169/275 (61%), Positives = 213/275 (77%), Gaps = 7/275 (2%)

Query: 3   SSCSECWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVNYQLFSNASKALRRSGF 62
           +SCS  W A  +FTISVVLA +AIS   ++ P  N  P+T P++++L  NAS ALRRSGF
Sbjct: 2   ASCSHWWHAPTYFTISVVLAYIAISTVPNS-PSRN--PTTPPISHKLSLNASAALRRSGF 58

Query: 63  NIIATLLQVSPEIFLSSHNSTIFAIQDSAISNTS--LPPWLFKKLLQYHTSPLKLSMNDL 120
           NII+TLL +SPEIFLSS NSTIFAIQDSA++N S  LPPW  + LLQYHTSPL  SM DL
Sbjct: 59  NIISTLLSISPEIFLSSPNSTIFAIQDSALTNASNALPPWFLRHLLQYHTSPLVFSMADL 118

Query: 121 LMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSL 180
           L KPQG C PT +++K VA+TK+   +R +EIN+VLVS PDIFLEG+L+IHGVL PFSS+
Sbjct: 119 LNKPQGICFPTLVYRKNVAVTKVDANQRFLEINHVLVSHPDIFLEGNLAIHGVLGPFSSM 178

Query: 181 DPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLHSV 240
             Q+     D IQ+PICD+ +S+L+ D ++ KNM+ EWT+I+RLLS NGFVSFAIGL+SV
Sbjct: 179 GSQDFDQILDSIQAPICDA-NSSLILDASDPKNMI-EWTRIVRLLSFNGFVSFAIGLNSV 236

Query: 241 IDQILEDNINLNSTTIFAPADFAVVASSSPLLDRI 275
           +D IL+D  NLNS TIF P + A+VAS SP+LD+I
Sbjct: 237 LDGILKDYSNLNSVTIFCPPELALVASPSPMLDKI 271

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357453567|ref|XP_003597061.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|355486109|gb|AES67312.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]

 Score =  318 bits (814), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 171/352 (48%), Positives = 234/352 (66%), Gaps = 8/352 (2%)

Query: 1   MASSCS-ECWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVN-YQLFSNASKALR 58
           MASS S  CW  + +F  SV L  +AI+ ++H+  K   SP   P   + L +NA++AL+
Sbjct: 1   MASSYSCWCWFPI-YFIASVALGVIAITSAIHSNSKS--SPEVIPSQTHTLSTNATEALK 57

Query: 59  RSGFNIIATLLQVSPEIFLSSHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMN 118
           + GF ++A LL  SP  FL   NST FAI+DSAI NTSLP W  K LL YHT   KL+M 
Sbjct: 58  KQGFVLMADLLHRSPPFFLPPKNSTFFAIKDSAIKNTSLPLWFLKSLLMYHTFTTKLTMQ 117

Query: 119 DLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFS 178
            LL K QG+C  T   QK  ++TK+   ++ +EIN+VL+S PD+FL    +IHGVL PFS
Sbjct: 118 QLLNKSQGTCETTLFRQKNASLTKVDTLQKTVEINHVLISNPDMFLGEEFNIHGVLGPFS 177

Query: 179 SLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLH 238
           SL  + +  G D+I+SP C SF +    ++ + KN V EW K+++LL S G+ SF+  LH
Sbjct: 178 SLQREVLQGGSDFIRSPTCPSFKTNSTYEVGDFKNFV-EWNKVVQLLGSKGYSSFSTALH 236

Query: 239 SVIDQILED--NINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGK 296
           SV++ IL+D  +    S TIFAP D  ++   S LLDR VR+HILPQ+FTYKEL+SLP +
Sbjct: 237 SVLEGILKDSSSFGYGSATIFAPPDVNLLHYPSTLLDRAVRIHILPQKFTYKELSSLPVR 296

Query: 297 TLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFR 348
           TLLKTL P+ +L I G   F++G  ING+QI  P++F S++FV+HGIS+AF+
Sbjct: 297 TLLKTLTPHDHLEIDGVLGFMEGVLINGIQIVKPDMFVSEKFVVHGISRAFK 348

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547049|ref|XP_003541930.1| PREDICTED: fasciclin-like arabinogalactan protein 21-like [Glycine max]

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 161/347 (46%), Positives = 226/347 (65%), Gaps = 13/347 (3%)

Query: 8   CWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVNYQLFSNASKALRRSGFNIIAT 67
           CW  L +   S+ L  +AIS ++ +    N  P   P+ + +  NAS ALR++GF ++A 
Sbjct: 34  CWFPL-YLAASIALGIIAISSAIRSTSNKN-PPQDPPIPHDISLNASNALRKAGFIVMAD 91

Query: 68  LLQVSPEIFLSSHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLK-LSMNDLLMKPQG 126
           LL  SP  F    NSTIFAI+DSAI NTS P W  K LL YHT+     S NDL+  PQG
Sbjct: 92  LLHHSPSFFKPPQNSTIFAIKDSAIKNTSHPLWFLKTLLLYHTTTSNAYSFNDLVKIPQG 151

Query: 127 SCLPTFLHQKKVAITKIVVKE--RLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSLDPQN 184
           +CLPT L  K V++TK+ +      +EIN+VL+S P+IFL   L++HGVL PFS L PQ+
Sbjct: 152 TCLPTLLRDKNVSLTKLDLDHAPNSVEINHVLISNPNIFLGEQLAVHGVLAPFSPLQPQD 211

Query: 185 I-HPGWDY-IQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLHSVID 242
           +   G+ + I++P C S       +++ SKN V EW +++ LL + G+ SF+I LHSV+D
Sbjct: 212 LLQRGFGFAIRTPTCRSNDV----NVSVSKNGV-EWNRVVHLLRAKGYASFSIALHSVLD 266

Query: 243 QILED-NINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGKTLLKT 301
            I  D + +L   TIFAP D  ++     +LDR VRLHILPQRF YKE++SLP ++LLKT
Sbjct: 267 GIKRDFSGSLGYVTIFAPRDLTLLGYPLTILDRAVRLHILPQRFVYKEISSLPVRSLLKT 326

Query: 302 LVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFR 348
           L+P+++L I G  DF+ G  +NGV I AP++  S++FV+HGIS+AF+
Sbjct: 327 LMPDEHLEIDGVLDFVPGMVVNGVVIVAPDMIISEKFVVHGISRAFK 373

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240213|ref|NP_196309.1| FASCICLIN-like arabinogalactan protein 21 precursor [Arabidopsis thaliana] gi|75171407|sp|Q9FL53.1|FLA21_ARATH RecName: Full=Fasciclin-like arabinogalactan protein 21; Flags: Precursor gi|9759548|dbj|BAB11150.1| unnamed protein product [Arabidopsis thaliana] gi|332003699|gb|AED91082.1| FASCICLIN-like arabinogalactan protein 21 precursor [Arabidopsis thaliana]

 Score =  284 bits (726), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 227/364 (62%), Gaps = 31/364 (8%)

Query: 1   MASSCSECWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVNYQLFS-----NASK 55
           M    S+C+    +F +S+ LA MAIS +L + P    S  T P+ +   S     NAS 
Sbjct: 1   MGCCSSDCF---VYFILSIALAFMAISTTLRSPPD---SEPTIPIAFSSSSPSLSLNASN 54

Query: 56  ALRRSGFNIIATLLQVSPEIFLSSH-NSTIFAIQDSAISNTS-LPPWLFKKLLQYHTSPL 113
            LR+S F  IATLL +SPEIFLSS  N+T+FAI+D++  NTS L P   K+LL YHT PL
Sbjct: 55  TLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLHYHTLPL 114

Query: 114 KLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGV 173
            LSM+DLL KPQG+CLPT LH K V I+ +  + R  E+N+V ++ PD+FL  SL IHGV
Sbjct: 115 MLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLGDSLVIHGV 174

Query: 174 LEPFSSLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSF 233
           + PFS L P + H     I +P+C S ++   S+  E    + +WT+I++LLSSNGFV F
Sbjct: 175 IGPFSPLQPHSDH----LIHTPLCQSDTTNKTSNNEEVPVSI-DWTRIVQLLSSNGFVPF 229

Query: 234 AIGLHSVIDQILED---NINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKEL 290
           AIGLHSV+++I+ D   + NL   TI A  +   ++S+SP L  +VR HIL QR TYK+ 
Sbjct: 230 AIGLHSVLNRIVNDHNHHKNLTGVTILATPNLVSLSSASPFLYEVVRHHILVQRLTYKDF 289

Query: 291 ASLPGKTLLKTLVPNQYLVI------SGGADFIQGFDINGVQIFAPEIFSSKQFVIHGIS 344
           AS+  K  +KTL P Q L I      S G DF+    I+GV+I  P++FSS  FVIHGIS
Sbjct: 290 ASMSDKATVKTLDPYQDLTITRRNVNSSGGDFM----ISGVEIVDPDMFSSSNFVIHGIS 345

Query: 345 QAFR 348
               
Sbjct: 346 HTLE 349

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806713|ref|XP_002871240.1| hypothetical protein ARALYDRAFT_349957 [Arabidopsis lyrata subsp. lyrata] gi|297317077|gb|EFH47499.1| hypothetical protein ARALYDRAFT_349957 [Arabidopsis lyrata subsp. lyrata]

 Score =  268 bits (686), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 168/363 (46%), Positives = 221/363 (60%), Gaps = 32/363 (8%)

Query: 1   MASSCSECWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVNYQLFSNASKAL--- 57
           M    S+C+    +F +SV LA MAIS +L + P    S  T P+     S++       
Sbjct: 290 MGCCSSDCF---VYFVLSVALAFMAISSTLRSPP---DSEPTIPIASSSSSSSLSLNASN 343

Query: 58  --RRSGFNIIATLLQVSPEIFLSSH-NSTIFAIQDSAISNTS-LPPWLFKKLLQYHTSPL 113
             R+S F  IATLL +SPEIFLSS  N+T+FAI+D++  NTS L P   K+LLQYHT P 
Sbjct: 344 ALRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLQYHTLPH 403

Query: 114 KLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGV 173
            L MNDLL KPQG+CL T LH K V I+ +  + R  E+N+V +S PD+FL  SL IHGV
Sbjct: 404 MLPMNDLLKKPQGTCLSTLLHHKSVQISTVDQESRTAEVNHVRISHPDMFLGDSLVIHGV 463

Query: 174 LEPFSSLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVN-EWTKIIRLLSSNGFVS 232
           L PFS L P + H     +Q+ +C S +    SD  E    VN +W +I++LLSSNGFV 
Sbjct: 464 LGPFSPLQPHSDH----LLQTSLCQSDTRNKTSDNDEVP--VNIDWIRIVQLLSSNGFVP 517

Query: 233 FAIGLHSVIDQILED--NINLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKEL 290
           FAIGLHSV+++I+ D  + NL   TI A  +   ++S+SP L  +VR HIL QR T K+ 
Sbjct: 518 FAIGLHSVLNRIVNDHHHKNLTGVTILATPNLVSLSSASPFLYEVVRHHILAQRLTNKDF 577

Query: 291 ASLPGKTLLKTLVPNQYLVI------SGGADFIQGFDINGVQIFAPEIFSSKQFVIHGIS 344
           AS+P K  +KTL P Q L I      S   DF+    I+GV+I  P++FSS +FVIHGIS
Sbjct: 578 ASMPDKASVKTLDPYQDLTITRRNVNSSSGDFM----ISGVEIVDPDMFSSSEFVIHGIS 633

Query: 345 QAF 347
              
Sbjct: 634 HTL 636

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146654|ref|XP_002326085.1| predicted protein [Populus trichocarpa] gi|222862960|gb|EEF00467.1| predicted protein [Populus trichocarpa]

 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 79/139 (56%), Positives = 106/139 (76%)

Query: 213 NMVNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSPLL 272
            ++ EWT+II LLSS+  V FAIGL+SVI++IL D+ +L+S TIFAP++F  VASSSP+L
Sbjct: 23  KIIVEWTRIIHLLSSHRIVLFAIGLNSVINRILADDQSLSSVTIFAPSEFEFVASSSPML 82

Query: 273 DRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEI 332
           ++IVR HILP R TY ELA+LP K  L TL+P + L I  GA+  QG  INGV+I APEI
Sbjct: 83  EKIVRFHILPLRVTYIELAALPHKKRLMTLLPCEDLEIINGANVTQGLSINGVEIAAPEI 142

Query: 333 FSSKQFVIHGISQAFRDSR 351
           FSS++ ++H I QAF+ ++
Sbjct: 143 FSSRKLIVHEIPQAFKMAK 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357444555|ref|XP_003592555.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|355481603|gb|AES62806.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 143/299 (47%), Gaps = 25/299 (8%)

Query: 52  NASKALRRSGFNIIATLLQVSPEIFLS-SHNSTIFAIQDSAISNTSLPPWLFKKLLQYHT 110
           +A+  L  SGF  ++  L++  E  L  SH++T+FA  DSA   +  P      LL++H 
Sbjct: 30  DAADILLDSGFVSMSLTLEIVAESLLEQSHSATVFAPSDSAFKKSGQPSL---DLLRFHF 86

Query: 111 SPLKLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSI 170
             L L    L   P G+ LPT L  + + +T     +R+  +NN+ ++   I+ +G L +
Sbjct: 87  VMLPLPQQSLRRLPAGAKLPTMLTGQSLTVTT-SFSDRVTSVNNIKINGTPIYDDGVLLV 145

Query: 171 HGVLEPFSSLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGF 230
           +G+   F   DP   + G     S   +S+S++  S +  + N    + + ++ L ++G+
Sbjct: 146 YGIDRFF---DPNFQYTG----PSRKPNSYSNSSCSALNRTVNSSGSFEQAVKTLKTSGY 198

Query: 231 VSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSPLLD--RIVRLHILPQRFTYK 288
              A    S +   L  NIN N  T+FAP D  V+       D     R H++P +F + 
Sbjct: 199 SVMA----SFLGMQLSGNINQNGITVFAPTDEMVMNRIGDFEDYPSFFRRHVVPCKFLWN 254

Query: 289 ELASLPGKTLLKTLVPNQYLVI--SGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQ 345
           +L      T L T +    + I  SGG        +NGV +F P++F + + V+HG++ 
Sbjct: 255 DLVDFGDGTQLPTFLEGFSINITRSGGV-----LILNGVPVFFPDVFFNDRLVVHGVTD 308

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
TAIR|locus:2169464	353	FLA21 "AT5G06920" [Arabidopsis	0.932	0.932	0.475	1.4e-71
TAIR|locus:2037873	248	AT1G15190 "AT1G15190" [Arabido	0.362	0.516	0.276	5.8e-08
TAIR|locus:2196969	239	AT1G30800 "AT1G30800" [Arabido	0.359	0.531	0.298	7.8e-07
TAIR|locus:2126535	169	AT4G29980 "AT4G29980" [Arabido	0.402	0.840	0.276	1.5e-06
TAIR|locus:2167742	424	FLA20 "AT5G40940" [Arabidopsis	0.572	0.476	0.273	1.6e-06
TAIR|locus:2123241	176	AT4G12950 "AT4G12950" [Arabido	0.201	0.403	0.342	0.0001

TAIR|locus:2169464 FLA21 "AT5G06920" [Arabidopsis thaliana (taxid:3702)]

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 171/360 (47%), Positives = 228/360 (63%)

Query:     1 MASSCSECWRALAFFTISVVLACMAISMSLHAIPKDNGSPSTKPVNYQLFS-----NASK 55
             M    S+C+    +F +S+ LA MAIS +L + P D  S  T P+ +   S     NAS 
Sbjct:     1 MGCCSSDCF---VYFILSIALAFMAISTTLRS-PPD--SEPTIPIAFSSSSPSLSLNASN 54

Query:    56 ALRRSGFNIIATLLQVSPEIFLSSH-NSTIFAIQDSAISNTS-LPPWLFKKLLQYHTSPL 113
              LR+S F  IATLL +SPEIFLSS  N+T+FAI+D++  NTS L P   K+LL YHT PL
Sbjct:    55 TLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLHYHTLPL 114

Query:   114 KLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGV 173
              LSM+DLL KPQG+CLPT LH K V I+ +  + R  E+N+V ++ PD+FL  SL IHGV
Sbjct:   115 MLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLGDSLVIHGV 174

Query:   174 LEPFSSLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSF 233
             + PFS L P + H     I +P+C S ++   S+  E    + +WT+I++LLSSNGFV F
Sbjct:   175 IGPFSPLQPHSDH----LIHTPLCQSDTTNKTSNNEEVPVSI-DWTRIVQLLSSNGFVPF 229

Query:   234 AIGLHSVIDQILEDNI---NLNSTTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKEL 290
             AIGLHSV+++I+ D+    NL   TI A  +   ++S+SP L  +VR HIL QR TYK+ 
Sbjct:   230 AIGLHSVLNRIVNDHNHHKNLTGVTILATPNLVSLSSASPFLYEVVRHHILVQRLTYKDF 289

Query:   291 ASLPGKTLLKTLVPNQYLVI------SGGADFIQGFDINGVQIFAPEIFSSKQFVIHGIS 344
             AS+  K  +KTL P Q L I      S G DF+    I+GV+I  P++FSS  FVIHGIS
Sbjct:   290 ASMSDKATVKTLDPYQDLTITRRNVNSSGGDFM----ISGVEIVDPDMFSSSNFVIHGIS 345

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2037873 AT1G15190 "AT1G15190" [Arabidopsis thaliana (taxid:3702)]

 Score = 146 (56.5 bits), Expect = 5.8e-08, P = 5.8e-08
 Identities = 37/134 (27%), Positives = 66/134 (49%)

Query:   215 VNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAV----VASSSP 270
             + E  + I +L   G   FA  +  +   +L D ++  S T+FAP D  +    +  S P
Sbjct:    32 LEELERAIAILRVRGRALFANAI--ITSDLLFDLLSDESLTLFAPTDSMLFDLDMTHSLP 89

Query:   271 LLDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAP 330
                  +RLH +P R +   L SLP  + L TL+P+  L+++  +       ++GVQ+  P
Sbjct:    90 FYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTKHSSSNDSIFLDGVQLLIP 149

Query:   331 EIFSSKQFVIHGIS 344
              +F  +   +HG++
Sbjct:   150 GLFDGQHIAVHGLA 163

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2196969 AT1G30800 "AT1G30800" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 7.8e-07, P = 7.8e-07
 Identities = 43/144 (29%), Positives = 74/144 (51%)

Query:   220 KIIR-LLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADF--AVVASSSPLLD--- 273
             +II  ++ +  F  +A    S +D   +  I L S TIF P+DF  A ++SSS       
Sbjct:    38 RIIEAMIGAGDFRDWAADFLSAVDD--QFGIPL-SATIFIPSDFDSADISSSSSSTTGNN 94

Query:   274 -----RI-VRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQI 327
                  R+ V  HI+PQR ++ +L      + L TL+P   +V++  +  + G+ ++GV +
Sbjct:    95 NANPRRLSVAYHIVPQRLSFTDLRLFKPLSRLPTLLPGNTIVVTNNS--VPGYALDGVLV 152

Query:   328 FAPEIFSSKQFVIHGISQAFRDSR 351
               P++F S    IHG++ +   SR
Sbjct:   153 SEPDLFLSSSIAIHGVASSLDFSR 176

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2126535 AT4G29980 "AT4G29980" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 42/152 (27%), Positives = 77/152 (50%)

Query:   201 SSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAP- 259
             SST +  +T  +N +   TKII  + S+G  SF     + ++   E N  + ++T+F P 
Sbjct:    21 SSTSLPFLTTEQNQIA--TKIIDAMVSSG--SFEDWSGAFLNNNDELNGPVLTSTLFLPK 76

Query:   260 ADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQG 319
                  + ++SPL   +   HI+PQ   +  ++ +   + + TL+    +V++  +    G
Sbjct:    77 TSVEGINATSPL---VASYHIVPQWLDFSVISLMMPFSRIPTLLSGHSIVVTNNS--ASG 131

Query:   320 FDINGVQIFAPEIFSSKQFVIHGISQAFRDSR 351
             F ++GV I  P++F S   VIH ++  F  SR
Sbjct:   132 FTLDGVLISEPDLFVSPTIVIHRMAFPFNFSR 163

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2167742 FLA20 "AT5G40940" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 61/223 (27%), Positives = 99/223 (44%)

Query:   137 KVAITKIVVKER-LIEINNVLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHPGWDYIQSP 195
             K +I  +VV++  + +   V++   D F      I       SS+       G   I S 
Sbjct:   167 KTSINNVVVQDSPVFDDGYVVIYGSDEFFTSPTKISDDSSSSSSIPSTTSSTGSIPIPSS 226

Query:   196 ICDSFSS-TLVSDITE-----SK--NMVNEWTKIIRLLSSNGFVSFAIGLHSVIDQILED 247
                +  S  + SD T      SK  N  N +    RLL S GFV  A  L   +   LED
Sbjct:   227 ATQTPPSPNIASDSTRNLPNRSKPVNRFNIFESASRLLMSRGFVIIATFL--ALQ--LED 282

Query:   248 NINLNST--TIFAPADFAVVASSSPLLD--RIVRLHILPQRFTYKELASLPGK-TLLKTL 302
             N + N T  T+FAP D A+   ++   D   I R H++ Q   +K+L     + ++L+T+
Sbjct:   283 NTSGNDTKITVFAPIDEAIPNPTTKFSDYVTIFRGHVVSQLLLWKDLQKFAKEGSILQTV 342

Query:   303 VPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQ 345
             +    + IS   D +    +NGV +  P+++ +    +HG +Q
Sbjct:   343 LKGYEIEISLSGDILL---LNGVPLIYPDLYVNDWIAVHGFNQ 382

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2123241 AT4G12950 "AT4G12950" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 0.00010, P = 0.00010
 Identities = 25/73 (34%), Positives = 38/73 (52%)

Query:   104 KLLQYHTSPLKLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIF 163
             KL  YH  P +L   DLL+KP  S LPT L+   + +T          I+ VL+   DI+
Sbjct:    76 KLASYHIVPQRLEFADLLLKPSRSRLPTLLNGSSILVTNNSATS--FSIDGVLIIELDIY 133

Query:   164 LEGSLSIHGVLEP 176
             ++  ++IH +  P
Sbjct:   134 VDSFIAIHRIAYP 146


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      353       353   0.00079  117 3  11 22  0.36    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  220 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.44u 0.11s 28.55t   Elapsed:  00:00:02
  Total cpu time:  28.45u 0.11s 28.56t   Elapsed:  00:00:02
  Start:  Fri May 10 05:58:26 2013   End:  Fri May 10 05:58:28 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FL53	FLA21_ARATH	No assigned EC number	0.4670	0.9433	0.9433	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_XIII000448 hypothetical protein (353 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	353
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	8e-07
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	3e-06

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 46.6 bits (111), Expect = 8e-07
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 13/98 (13%)

Query: 255 TIFAPADFAVVASSSPL-------LDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQY 307
           T+FAP D A       L       L  ++  H++P R +  +L +      L TL     
Sbjct: 1   TVFAPTDEAFQKLPPDLNSLLADKLKNLLLYHVVPGRLSSADLLN---GGTLPTL-AGSK 56

Query: 308 LVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQ 345
           L I+          +NG +I   +I ++   V+H I +
Sbjct: 57  LRITRSGGSGTVT-VNGARIVEADIAAT-NGVVHVIDR 92

Length = 97

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 31/101 (30%), Positives = 39/101 (38%), Gaps = 12/101 (11%)

Query: 83  TIFAIQDSAISNT-----SLPPWLFKKLLQYHTSPLKLSMNDLLMKPQGSCLPTFLHQKK 137
           T+FA  D A         SL     K LL YH  P +LS  DL     G  LPT     K
Sbjct: 1   TVFAPTDEAFQKLPPDLNSLLADKLKNLLLYHVVPGRLSSADL---LNGGTLPTLAGS-K 56

Query: 138 VAITKIVVKERLIEINNVLVSRPDIFLEGSL--SIHGVLEP 176
           + IT+       + +N   +   DI     +   I  VL P
Sbjct: 57  LRITRSGGSGT-VTVNGARIVEADIAATNGVVHVIDRVLLP 96

Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	353
COG2335	187	Secreted and surface protein containing fasciclin-	99.88
COG2335	187	Secreted and surface protein containing fasciclin-	99.86
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.8
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.79
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.78
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.72
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.71
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.55

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.88  E-value=2.2e-22  Score=176.09  Aligned_cols=122  Identities=20%  Similarity=0.265  Sum_probs=103.4

Q ss_pred             HHHHHH-hcCChHHHHHHHHHHHHHHHHhhcCCCCeEEEeeCcHHHhhCChhH------------HHHHhhhcccccccc
Q 042381          220 KIIRLL-SSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSPL------------LDRIVRLHILPQRFT  286 (353)
Q Consensus       220 ~~~~~L-~~~g~~~~a~aL~~~l~~l~~~l~~~~~~TvFAPtD~Af~~~~~~~------------L~~iL~yHvvp~~~~  286 (353)
                      ++++.. ....|+++..+++.  +++.+.|.+.|+||||||+|+||+++|...            |.++|.||||+|+++
T Consensus        49 ~iV~~a~~~~~f~tl~~a~~a--a~Lv~~L~~~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv~Gk~~  126 (187)
T COG2335          49 DIVESAANNPSFTTLVAALKA--AGLVDTLNETGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGKIT  126 (187)
T ss_pred             HHHHHHccCcchHHHHHHHHh--hhhHHHhcCCCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEEcCccc
Confidence            344444 45569999999976  677788888899999999999999998654            578999999999999


Q ss_pred             hhhhccCCCCceeecccCCceEEEEecCCceeeEEEceEEEeccceeecCCeEEEEeCccccCCC
Q 042381          287 YKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRDSR  351 (353)
Q Consensus       287 ~~~l~~l~~g~~l~Tl~~g~~l~v~~~~~~~~~v~vn~a~I~~~di~~~~~gvVH~Id~VL~~~~  351 (353)
                      .+++.+   ....+|+ +|..+.|...+++   ++||+++++.+|+..+| ||||+||.||.||.
T Consensus       127 ~~~l~~---~~~v~t~-~G~~~~i~~~~~~---~~Vn~a~v~~~di~a~N-gvIhvID~Vl~Pp~  183 (187)
T COG2335         127 AADLKS---SGSVKTV-QGADLKIKVTGGG---VYVNDATVTIADINASN-GVIHVIDKVLIPPM  183 (187)
T ss_pred             HHHhhc---cccceee-cCceEEEEEcCCc---EEEeeeEEEeccEeccC-cEEEEEeeeccCCC
Confidence            999865   3456786 7999999999887   99999999999998765 79999999999985

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.86  E-value=1.4e-21  Score=171.12  Aligned_cols=124  Identities=18%  Similarity=0.183  Sum_probs=103.8

Q ss_pred             hhhHHHHHHhCC-cHHHHHHHhcCc--ccccCCCCeEEEEeCCHhhhcCC--------C--ChHHHHHhhhccccCCccc
Q 042381           50 FSNASKALRRSG-FNIIATLLQVSP--EIFLSSHNSTIFAIQDSAISNTS--------L--PPWLFKKLLQYHTSPLKLS  116 (353)
Q Consensus        50 ~~~i~~~L~~~g-~t~la~ll~~~~--~~l~~~~~~TvFAPtd~Af~~~~--------~--~~~~l~~lL~yHvvp~~~~  116 (353)
                      ..+|++....++ |++|..+++.++  ++|.+.|+||||||+|+||.+++        +  ....|+++|.|||++|+++
T Consensus        47 ~~~iV~~a~~~~~f~tl~~a~~aa~Lv~~L~~~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv~Gk~~  126 (187)
T COG2335          47 RADIVESAANNPSFTTLVAALKAAGLVDTLNETGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGKIT  126 (187)
T ss_pred             hhHHHHHHccCcchHHHHHHHHhhhhHHHhcCCCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEEcCccc
Confidence            356777664444 999999999887  68999999999999999999997        2  3446889999999999999


Q ss_pred             hhhhcCCCCCceeeeeecCceEEEEEccceeeEEEEeeEEEeccceeecCceEEEEeCcccCCCC
Q 042381          117 MNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSLD  181 (353)
Q Consensus       117 ~~~L~~~~~g~~~~Tll~~~~l~v~~~~~~~~~v~vn~a~V~~~di~~~g~~vVH~Id~vL~p~~  181 (353)
                      .+++...   ..+.| ++|..++|...++   +++||.++|+.+|+.. +||+||.||+||.||.
T Consensus       127 ~~~l~~~---~~v~t-~~G~~~~i~~~~~---~~~Vn~a~v~~~di~a-~NgvIhvID~Vl~Pp~  183 (187)
T COG2335         127 AADLKSS---GSVKT-VQGADLKIKVTGG---GVYVNDATVTIADINA-SNGVIHVIDKVLIPPM  183 (187)
T ss_pred             HHHhhcc---cccee-ecCceEEEEEcCC---cEEEeeeEEEeccEec-cCcEEEEEeeeccCCC
Confidence            9999864   34556 6899999988763   5999999999999874 4669999999999975

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.80  E-value=1.1e-19  Score=145.65  Aligned_cols=90  Identities=26%  Similarity=0.394  Sum_probs=77.5

Q ss_pred             EEEeeCcHHHhhCChh---------HHHHHhhhcccccccchhhhccCCCCceeecccCCceEEEEecCCceeeEEEceE
Q 042381          255 TIFAPADFAVVASSSP---------LLDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGV  325 (353)
Q Consensus       255 TvFAPtD~Af~~~~~~---------~L~~iL~yHvvp~~~~~~~l~~l~~g~~l~Tl~~g~~l~v~~~~~~~~~v~vn~a  325 (353)
                      |||||+|+||++++..         .++++|+|||+|+++..++|..   +..++|+ .|..+.++..++ .+.+++|++
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~---~~~~~Tl-~g~~l~v~~~~~-~~~i~in~~   75 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLN---GGTLPTL-AGSKLRVTRSGD-SGTVTVNGA   75 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhcc---CCccccC-CCCEEEEEEeCC-CCeEEEcce
Confidence            8999999999998653         4679999999999999999864   6788998 599999999873 123999999


Q ss_pred             EEeccceeecCCeEEEEeCccccCC
Q 042381          326 QIFAPEIFSSKQFVIHGISQAFRDS  350 (353)
Q Consensus       326 ~I~~~di~~~~~gvVH~Id~VL~~~  350 (353)
                      +|+.+|+.++| |+||+||+||.|+
T Consensus        76 ~v~~~di~~~n-Gvih~Id~vL~P~   99 (99)
T smart00554       76 RIVEADIAATN-GVVHVIDRVLLPP   99 (99)
T ss_pred             EEEECCEecCC-eEEEEECceeCCC
Confidence            99999998875 8999999999775

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.79  E-value=3.8e-19  Score=148.63  Aligned_cols=111  Identities=27%  Similarity=0.319  Sum_probs=84.1

Q ss_pred             hHHHHHHHHHHHHHHHHhh-cCCCCeEEEeeCcHHHhhCCh----------hHHHHHhhhcccccccchhhhccCCCC-c
Q 042381          230 FVSFAIGLHSVIDQILEDN-INLNSTTIFAPADFAVVASSS----------PLLDRIVRLHILPQRFTYKELASLPGK-T  297 (353)
Q Consensus       230 ~~~~a~aL~~~l~~l~~~l-~~~~~~TvFAPtD~Af~~~~~----------~~L~~iL~yHvvp~~~~~~~l~~l~~g-~  297 (353)
                      |+.|+.+|+.  +++...+ ...+.+|||||+|+||++++.          +.++++|+|||+++++..++++.   + .
T Consensus         3 ~s~f~~~l~~--~~l~~~l~~~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~---~~~   77 (128)
T PF02469_consen    3 LSTFSRLLEQ--AGLADLLNDSDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRN---GKQ   77 (128)
T ss_dssp             THHHHHHHHH--TTCHHHHGCSSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHC---HHE
T ss_pred             HHHHHHHHHH--cCCHHHHhcCCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhcc---ccc
Confidence            4555555554  3445556 566899999999999998742          23689999999999998888864   4 6


Q ss_pred             eeecccCCceEEEEec--CCceeeEEEce-EEEeccceeecCCeEEEEeCccccC
Q 042381          298 LLKTLVPNQYLVISGG--ADFIQGFDING-VQIFAPEIFSSKQFVIHGISQAFRD  349 (353)
Q Consensus       298 ~l~Tl~~g~~l~v~~~--~~~~~~v~vn~-a~I~~~di~~~~~gvVH~Id~VL~~  349 (353)
                      .++|+..|..+.++..  ++.   ++||+ ++|+.+|+.+++ |+||+||+||.|
T Consensus        78 ~~~t~~~g~~~~v~~~~~~~~---~~v~~~a~i~~~~~~~~n-G~ih~id~vL~P  128 (128)
T PF02469_consen   78 TLETLLNGQPLRVSSSPSNGT---IYVNGKARIVKSDIEASN-GVIHIIDDVLIP  128 (128)
T ss_dssp             EEEBSSTTCEEEEEEEGGTTE---EEECCEEEESEEEEEESS-EEEEEESS-TSS
T ss_pred             cceeccCCCEEEEEEEecCCc---eEecCceEEEeCCEEeCC-EEEEEECceECc
Confidence            7898558999999997  444   99999 999999998765 899999999986

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.78  E-value=4.3e-18  Score=175.08  Aligned_cols=247  Identities=16%  Similarity=0.181  Sum_probs=161.7

Q ss_pred             hhhHHHHHHhCCcHHHHHHHhcCc--ccccCCCCeEEEEeCCHhhhcCCCChH---HHHHhhhccccCCccchhhhcCCC
Q 042381           50 FSNASKALRRSGFNIIATLLQVSP--EIFLSSHNSTIFAIQDSAISNTSLPPW---LFKKLLQYHTSPLKLSMNDLLMKP  124 (353)
Q Consensus        50 ~~~i~~~L~~~g~t~la~ll~~~~--~~l~~~~~~TvFAPtd~Af~~~~~~~~---~l~~lL~yHvvp~~~~~~~L~~~~  124 (353)
                      ..+.+++..+...+++.+++...+  ..|.+.+..|+|+|+|+||++.. +..   .++.+|.||+++-+...++..+. 
T Consensus       373 ~~~l~~La~e~~~st~~rlv~elgll~~L~~n~e~t~~lp~n~~fd~~~-~~~~r~l~~qIL~~HII~~~~~~~~~y~~-  450 (682)
T KOG1437|consen  373 LKNLMSLAREDEISTSMRLVAELGLLTALAPNDEATLLLPTNNLFDDLT-PLESRRLAEQILYNHIIPEYLTSSSMYNG-  450 (682)
T ss_pred             HHHHHHHHhcccccHHHHHHHhccceEEEcCCCceEEeeehhhhccCCC-hhhhHHHHHHHHHHhCcchhhhhhhhhcc-
Confidence            368888888888999999998876  34777677999999999999874 322   26889999999999998887653 


Q ss_pred             CCceeeeeecCceEEEEEccc----eeeEEEEee-EEEeccceeecCceEEEEeCcccCCCCCCCCCCCcccccCCCCCC
Q 042381          125 QGSCLPTFLHQKKVAITKIVV----KERLIEINN-VLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHPGWDYIQSPICDS  199 (353)
Q Consensus       125 ~g~~~~Tll~~~~l~v~~~~~----~~~~v~vn~-a~V~~~di~~~g~~vVH~Id~vL~p~~~~~~~~~~~~~~~p~~~~  199 (353)
                       ++.++| +.+..+.+-.+..    +...+.++| +.|...|+... +|+||.||+|+.|   .++   +..+.      
T Consensus       451 -~~~v~t-~g~~~l~~fv~r~~~s~~~t~i~~~~~~~Ii~aDi~~~-nGvvH~id~vl~p---~~l---~~~l~------  515 (682)
T KOG1437|consen  451 -QTTVRT-LGKNKLLYFVYRHSVSANVTDILIGNEACIIEADISVK-NGVVHIIDRVLDP---VSL---MEDLK------  515 (682)
T ss_pred             -cceeec-cCCeEEEEEEecccccccceeeeccceeeEEeccccee-cCceEEeeEEcCc---ccH---HHHHh------
Confidence             235666 4555554444332    112344544 67778888632 4599999999987   211   11111      


Q ss_pred             CCCccccCcchhhhhhhhHHHHHHHHhcCChHHHHHHHHHHHHHHHHhhcCCCCeEEEeeCcHHHhhCChh--------H
Q 042381          200 FSSTLVSDITESKNMVNEWTKIIRLLSSNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSP--------L  271 (353)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~a~aL~~~l~~l~~~l~~~~~~TvFAPtD~Af~~~~~~--------~  271 (353)
                                                ....++.+..+++.  .++-+++..++.||+|+|+|+||.+...+        .
T Consensus       516 --------------------------~d~r~s~~~~~le~--~~l~e~l~~~~~~t~fvPt~ka~~~~~~~~~~~~~~~~  567 (682)
T KOG1437|consen  516 --------------------------TDGRISGTVQGLEG--VLLPEELTPEGNYTLFVPTNKAWQKSTKDEKSLFHKKA  567 (682)
T ss_pred             --------------------------hccchhhhHHhhhh--cCChhhhccCCceEEEeecccccccCCcchhhcchHHH
Confidence                                      00112222222221  11223344578999999999999986433        2


Q ss_pred             HHHHhhhcccccccchhhhccCCCCceeecc------cCCceEEEEecCCceeeEEEceEEEeccceeecCCeEEEEeCc
Q 042381          272 LDRIVRLHILPQRFTYKELASLPGKTLLKTL------VPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQ  345 (353)
Q Consensus       272 L~~iL~yHvvp~~~~~~~l~~l~~g~~l~Tl------~~g~~l~v~~~~~~~~~v~vn~a~I~~~di~~~~~gvVH~Id~  345 (353)
                      |..++.||++++.... ++     +.+..++      ..|..+.+......   ..+|-.+++..|+...| ||+|.||.
T Consensus       568 l~~~l~yH~v~~~~~l-s~-----~~~~~v~~~~k~s~~~~~~~~~~~~~~---~~vn~e~~~~~~i~~~n-~~~h~i~~  637 (682)
T KOG1437|consen  568 LQDFLKYHLVPGQSRL-SL-----GSSPYVMIQVKLSLRGDHLFFSLVNPR---GDVNKERLVGIDIMGTN-GVVHVIDL  637 (682)
T ss_pred             HHHHHHhccccceeee-ec-----ccccceeeeeeEEEecccEEeeeeccc---cceeeeeeeccceeeec-ceeEEEEE
Confidence            6899999999987631 11     1111222      12344444433333   67788899999999886 69999999


Q ss_pred             cccCCC
Q 042381          346 AFRDSR  351 (353)
Q Consensus       346 VL~~~~  351 (353)
                      ||.|+.
T Consensus       638 vl~p~~  643 (682)
T KOG1437|consen  638 VLKPPD  643 (682)
T ss_pred             EcccCc
Confidence            999963

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.72  E-value=1.2e-17  Score=139.51  Aligned_cols=115  Identities=23%  Similarity=0.284  Sum_probs=88.8

Q ss_pred             CcHHHHHHHhcCc--ccc-cCCCCeEEEEeCCHhhhcCC--------CChHHHHHhhhccccCCccchhhhcCCCCCcee
Q 042381           61 GFNIIATLLQVSP--EIF-LSSHNSTIFAIQDSAISNTS--------LPPWLFKKLLQYHTSPLKLSMNDLLMKPQGSCL  129 (353)
Q Consensus        61 g~t~la~ll~~~~--~~l-~~~~~~TvFAPtd~Af~~~~--------~~~~~l~~lL~yHvvp~~~~~~~L~~~~~g~~~  129 (353)
                      +|++|+++++.++  +.+ ...+++|||||+|+||++++        .+...++++|+||++++.+..++|...  ...+
T Consensus         2 ~~s~f~~~l~~~~l~~~l~~~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~--~~~~   79 (128)
T PF02469_consen    2 DLSTFSRLLEQAGLADLLNDSDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNG--KQTL   79 (128)
T ss_dssp             TTHHHHHHHHHTTCHHHHGCSSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCH--HEEE
T ss_pred             CHHHHHHHHHHcCCHHHHhcCCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhccc--cccc
Confidence            6899999999887  456 45699999999999998874        123357899999999999999998852  1467


Q ss_pred             eeeecCceEEEEEccceeeEEEEee-EEEeccceeecCceEEEEeCcccCC
Q 042381          130 PTFLHQKKVAITKIVVKERLIEINN-VLVSRPDIFLEGSLSIHGVLEPFSS  179 (353)
Q Consensus       130 ~Tll~~~~l~v~~~~~~~~~v~vn~-a~V~~~di~~~g~~vVH~Id~vL~p  179 (353)
                      +|.+.|..+.++...+ .+.++||+ ++|+..|+..+ +|+||.||+||.|
T Consensus        80 ~t~~~g~~~~v~~~~~-~~~~~v~~~a~i~~~~~~~~-nG~ih~id~vL~P  128 (128)
T PF02469_consen   80 ETLLNGQPLRVSSSPS-NGTIYVNGKARIVKSDIEAS-NGVIHIIDDVLIP  128 (128)
T ss_dssp             EBSSTTCEEEEEEEGG-TTEEEECCEEEESEEEEEES-SEEEEEESS-TSS
T ss_pred             eeccCCCEEEEEEEec-CCceEecCceEEEeCCEEeC-CEEEEEECceECc
Confidence            7767899999988721 34799999 99999998654 5799999999976

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.71  E-value=2.8e-17  Score=131.60  Aligned_cols=92  Identities=28%  Similarity=0.354  Sum_probs=75.9

Q ss_pred             EEEEeCCHhhhcCCCC---hH----HHHHhhhccccCCccchhhhcCCCCCceeeeeecCceEEEEEccceeeEEEEeeE
Q 042381           83 TIFAIQDSAISNTSLP---PW----LFKKLLQYHTSPLKLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNV  155 (353)
Q Consensus        83 TvFAPtd~Af~~~~~~---~~----~l~~lL~yHvvp~~~~~~~L~~~~~g~~~~Tll~~~~l~v~~~~~~~~~v~vn~a  155 (353)
                      |+|||+|+||+++...   .+    .++++|+||++|+++..++|..   +..++|+ .|..++++..+. .+.+++|++
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~---~~~~~Tl-~g~~l~v~~~~~-~~~i~in~~   75 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLN---GGTLPTL-AGSKLRVTRSGD-SGTVTVNGA   75 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhcc---CCccccC-CCCEEEEEEeCC-CCeEEEcce
Confidence            8999999999998621   11    5789999999999999999975   4567785 588999988752 247999999


Q ss_pred             EEeccceeecCceEEEEeCcccCCC
Q 042381          156 LVSRPDIFLEGSLSIHGVLEPFSSL  180 (353)
Q Consensus       156 ~V~~~di~~~g~~vVH~Id~vL~p~  180 (353)
                      +|+.+|+..+ +|+||+||+||.||
T Consensus        76 ~v~~~di~~~-nGvih~Id~vL~P~   99 (99)
T smart00554       76 RIVEADIAAT-NGVVHVIDRVLLPP   99 (99)
T ss_pred             EEEECCEecC-CeEEEEECceeCCC
Confidence            9999999854 57999999999874

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.55  E-value=1.7e-14  Score=148.77  Aligned_cols=222  Identities=16%  Similarity=0.121  Sum_probs=137.7

Q ss_pred             CCCeEEEEeCCHhhhcCCCChHHHHHhhhccccCCccchhhhcCCC-------CCceeeeeecCceEEEEEccceeeEEE
Q 042381           79 SHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMNDLLMKP-------QGSCLPTFLHQKKVAITKIVVKERLIE  151 (353)
Q Consensus        79 ~~~~TvFAPtd~Af~~~~~~~~~l~~lL~yHvvp~~~~~~~L~~~~-------~g~~~~Tll~~~~l~v~~~~~~~~~v~  151 (353)
                      .++.|.+||+|+||.+.+  ......++.||.+.+.+......+..       .++...| ..+..+.+...|   ....
T Consensus       270 ~d~rt~~a~tn~a~~~ip--~~~~~~~~~~~~v~~~~~~~~i~~~~~~~~s~~~~~~r~~-~~~~~~a~g~~g---~~~~  343 (682)
T KOG1437|consen  270 VDPRTHLAPTNEAFFTIP--RGYPPRILGYHLVLGNLKYNHILDNMKLGPSLAPGTVRLT-GEGVAIAPGSSG---ERYH  343 (682)
T ss_pred             cccccccccCcchhhccc--ccCCCcccccccchhhhhhhhhcccccccccccccceeec-cccccccccCCC---ceEE
Confidence            478999999999998764  22344677788877776554443211       1122222 122223333332   3577


Q ss_pred             EeeEEEeccceeecCceEEEEeCcccCCCCCCCCCCCcccccCCCCCCCCCccccCcchhhhhhhhHHHHHHHHhcCChH
Q 042381          152 INNVLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHPGWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSSNGFV  231 (353)
Q Consensus       152 vn~a~V~~~di~~~g~~vVH~Id~vL~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~  231 (353)
                      +||..++..|...++ +++|.||.++.|+...                                    .++++.+...-+
T Consensus       344 ~ng~~~I~kd~i~~~-~~lh~id~~l~p~~~~------------------------------------~l~~La~e~~~s  386 (682)
T KOG1437|consen  344 INGRAIIQKDFIHTN-GLLHYIDYVLEPDSLK------------------------------------NLMSLAREDEIS  386 (682)
T ss_pred             eecceeEEEeeeccc-eEEEEcccccCCchHH------------------------------------HHHHHHhccccc
Confidence            888776657766543 6999999999875221                                    111222222222


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCeEEEeeCcHHHhhCChhH----HHHHhhhcccccccchhhhccCCCCceeecccCCce
Q 042381          232 SFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSPL----LDRIVRLHILPQRFTYKELASLPGKTLLKTLVPNQY  307 (353)
Q Consensus       232 ~~a~aL~~~l~~l~~~l~~~~~~TvFAPtD~Af~~~~~~~----L~~iL~yHvvp~~~~~~~l~~l~~g~~l~Tl~~g~~  307 (353)
                      ++...+..  .+++.-|...+.+|+|+|+|+||+.+....    ++++|+||++|.++.+++...  .++.++|+ .|..
T Consensus       387 t~~rlv~e--lgll~~L~~n~e~t~~lp~n~~fd~~~~~~~r~l~~qIL~~HII~~~~~~~~~y~--~~~~v~t~-g~~~  461 (682)
T KOG1437|consen  387 TSMRLVAE--LGLLTALAPNDEATLLLPTNNLFDDLTPLESRRLAEQILYNHIIPEYLTSSSMYN--GQTTVRTL-GKNK  461 (682)
T ss_pred             HHHHHHHh--ccceEEEcCCCceEEeeehhhhccCCChhhhHHHHHHHHHHhCcchhhhhhhhhc--ccceeecc-CCeE
Confidence            22222221  122333444444999999999999976533    489999999999998887643  23377886 5655


Q ss_pred             EEEEecCC----ceeeEEEce-EEEeccceeecCCeEEEEeCccccC
Q 042381          308 LVISGGAD----FIQGFDING-VQIFAPEIFSSKQFVIHGISQAFRD  349 (353)
Q Consensus       308 l~v~~~~~----~~~~v~vn~-a~I~~~di~~~~~gvVH~Id~VL~~  349 (353)
                      +..-....    .+..+.++| +.|.+.|+..++ |+||.||+||.|
T Consensus       462 l~~fv~r~~~s~~~t~i~~~~~~~Ii~aDi~~~n-GvvH~id~vl~p  507 (682)
T KOG1437|consen  462 LLYFVYRHSVSANVTDILIGNEACIIEADISVKN-GVVHIIDRVLDP  507 (682)
T ss_pred             EEEEEecccccccceeeeccceeeEEecccceec-CceEEeeEEcCc
Confidence            54433221    123466666 568899998875 799999999988

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	353
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 3e-06
 Identities = 54/315 (17%), Positives = 98/315 (31%), Gaps = 81/315 (25%)

Query: 72  SPEIFLSSHNSTIFAIQDSAISNTSLPPWLFKKLLQYHTSPLKLSMNDLLMKPQGSCLPT 131
            P+  LS        +   A+S T     LF  LL      ++  + ++L +     L +
Sbjct: 41  MPKSILSKEEIDHIIMSKDAVSGTLR---LFWTLLSKQEEMVQKFVEEVL-RINYKFLMS 96

Query: 132 FLH---QKKVAITKIVV--KERLIEINNVL----VSRPDIFL-----------EGSLSIH 171
            +    ++   +T++ +  ++RL   N V     VSR   +L             ++ I 
Sbjct: 97  PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID 156

Query: 172 G---------VLEPFSSLDPQNIHPG---WDYIQSPICDSFSSTLVSDITESKNMVNEWT 219
           G          L+   S   Q        W  +    C+S  + L       + +     
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFW--LNLKNCNSPETVL-------EMLQKLLY 207

Query: 220 KIIRLLSSNGFVSFAI--GLHSVIDQ---------------ILEDNI---------NLNS 253
           +I    +S    S  I   +HS+  +               +L  N+         NL+ 
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL-LNVQNAKAWNAFNLSC 266

Query: 254 TTIFAPADFAVVASSSPLLDRIVRLHILPQRFTYKELASLPGKTL---LKTLVPNQY--- 307
             +       V    S      + L       T  E+ SL  K L    + L P +    
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL-PREVLTT 325

Query: 308 --LVISGGADFIQGF 320
               +S  A+ I+  
Sbjct: 326 NPRRLSIIAESIRDG 340

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	353
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	100.0
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.9
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.9
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.88
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.88
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.87
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.85
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.75

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=100.00  E-value=9.1e-40  Score=314.62  Aligned_cols=256  Identities=14%  Similarity=0.146  Sum_probs=182.0

Q ss_pred             hhHHHHHH-------hCCcHHHHHHHhcCc----ccccCCCCeEEEEeCCHhhhcCC-----CChHHHHHhhhccccCCc
Q 042381           51 SNASKALR-------RSGFNIIATLLQVSP----EIFLSSHNSTIFAIQDSAISNTS-----LPPWLFKKLLQYHTSPLK  114 (353)
Q Consensus        51 ~~i~~~L~-------~~g~t~la~ll~~~~----~~l~~~~~~TvFAPtd~Af~~~~-----~~~~~l~~lL~yHvvp~~  114 (353)
                      .||+++|+       ...|++|+++|+.++    +.|.+.+++|||||+|+||.+..     .+...++++|+||+++++
T Consensus         6 ~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~   85 (324)
T 1o70_A            6 TTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDR   85 (324)
T ss_dssp             -------------CCHHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSC
T ss_pred             hhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCe
Confidence            48888887       445999999999886    46777899999999999998764     244568999999999999


Q ss_pred             cchhhhcCCCCC-c-eeeeeecCceEEEEEcc-ceeeEEEEee----EEEeccceeecCceEEEEeCcccCCCCCCCCCC
Q 042381          115 LSMNDLLMKPQG-S-CLPTFLHQKKVAITKIV-VKERLIEINN----VLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHP  187 (353)
Q Consensus       115 ~~~~~L~~~~~g-~-~~~Tll~~~~l~v~~~~-~~~~~v~vn~----a~V~~~di~~~g~~vVH~Id~vL~p~~~~~~~~  187 (353)
                      +..++|.....+ . .++|+..+..++++..+ +..+.+++|+    ++|+.+|+.. .+|+||+||+||.||...    
T Consensus        86 ~~~~~l~~~~~~~~~~~~Tl~g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~-~NGvIhvID~VL~pp~~t----  160 (324)
T 1o70_A           86 LNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQ-TNGYVHIIDHVLGVPYTT----  160 (324)
T ss_dssp             CCHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEEC-SSEEEEEESSCTTSCCSC----
T ss_pred             ecHHHHhhccCCCceEEEcCCCCceEEEEEeecCCceEEEEcCCceeEEEEeccccc-cCcEEEEEchhhhhchhh----
Confidence            999998764311 1 56775433335655442 1234688885    8999999874 367999999999886321    


Q ss_pred             CcccccCCCCCCCCCccccCcchhhhhhhhHHHHHHHHhc-CChHHHHHHHHHHHHHHHHhhc-CCCCeEEEeeCcHHHh
Q 042381          188 GWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSS-NGFVSFAIGLHSVIDQILEDNI-NLNSTTIFAPADFAVV  265 (353)
Q Consensus       188 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~g~~~~a~aL~~~l~~l~~~l~-~~~~~TvFAPtD~Af~  265 (353)
                                                       +.+.++. ..|+.|..+++.  +++.+.|. ..++||||||+|+||+
T Consensus       161 ---------------------------------i~~~l~~~~~fs~~~~~l~~--~gl~~~L~~~~~~~TvFAPtd~Af~  205 (324)
T 1o70_A          161 ---------------------------------VLGKLESDPMMSDTYKMGKF--SHFNDQLNNTQRRFTYFVPRDKGWQ  205 (324)
T ss_dssp             ---------------------------------HHHHHHHCGGGHHHHHHTTT--TTTTGGGGCSSSEEEEEEECHHHHH
T ss_pred             ---------------------------------HHHHhhcCchHHHHHHHHHh--hCHHHHhCCCCCCeEEEEeChHHHH
Confidence                                             1123333 347777666654  44555565 4688999999999999


Q ss_pred             hCC------------h---hHHHHHhhhccccc--ccchhhhccCCC--C-ceeecccCCceEEEEe--cCCceeeEEEc
Q 042381          266 ASS------------S---PLLDRIVRLHILPQ--RFTYKELASLPG--K-TLLKTLVPNQYLVISG--GADFIQGFDIN  323 (353)
Q Consensus       266 ~~~------------~---~~L~~iL~yHvvp~--~~~~~~l~~l~~--g-~~l~Tl~~g~~l~v~~--~~~~~~~v~vn  323 (353)
                      +++            .   +.|+++|+|||+|+  .+..++|.....  + ..++|+.  ..+.++.  .++.   ++||
T Consensus       206 ~l~~~~~~~~~~~l~~~~~~~l~~iL~yHvv~~~~~~~~~~l~~~~~~~~~~~~~Tl~--~~l~v~~~~~~~~---v~v~  280 (324)
T 1o70_A          206 KTELDYPSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFR--DSLSIRVEEEAGR---YVII  280 (324)
T ss_dssp             HHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESSCCCHHHHHHHHHHSSSEEEECSS--SEEEEEEEEETTE---EEEE
T ss_pred             hhhhhchhHHHHHhccCcHHHHHHHHHhcEeCCcceEcHHHHhhhccCCCeeeeeccC--CcEEEEEEecCCE---EEEE
Confidence            873            1   25789999999998  777788864210  1 1478874  6787765  4555   8887


Q ss_pred             ----eEEEeccceeecCCeEEEEeCccccCCCC
Q 042381          324 ----GVQIFAPEIFSSKQFVIHGISQAFRDSRT  352 (353)
Q Consensus       324 ----~a~I~~~di~~~~~gvVH~Id~VL~~~~~  352 (353)
                          +++|+.+|+.++| ||||+||+||.|++.
T Consensus       281 ~~~~~a~v~~~di~~~N-GvIHvID~VL~P~~~  312 (324)
T 1o70_A          281 WNYKKINVYRPDVECTN-GIIHVIDYPLLEEKD  312 (324)
T ss_dssp             ETTEEEEEEEEEEEETT-EEEEEESSCSCCTTT
T ss_pred             ecCceeEEEEcccccCC-CeEEEeceeecCCcc
Confidence                8999999998875 799999999999863

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.90  E-value=5.6e-24  Score=178.97  Aligned_cols=118  Identities=22%  Similarity=0.300  Sum_probs=98.5

Q ss_pred             HHHHHhc-CChHHHHHHHHHHHHHHHHhhcCCCCeEEEeeCcHHHhhCChh----------HHHHHhhhcccccccchhh
Q 042381          221 IIRLLSS-NGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSP----------LLDRIVRLHILPQRFTYKE  289 (353)
Q Consensus       221 ~~~~L~~-~g~~~~a~aL~~~l~~l~~~l~~~~~~TvFAPtD~Af~~~~~~----------~L~~iL~yHvvp~~~~~~~  289 (353)
                      +++.|+. .+|+.|+.++++  +++.+.|.+.++||||||+|+||++++..          .|+++|+|||+|+.+...+
T Consensus         4 i~~~l~~~~~fs~~~~~l~~--agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~   81 (132)
T 2vxp_A            4 VMDVLKGDNRFSMLVAAIQS--AGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGG   81 (132)
T ss_dssp             HHHHHTTSTTCHHHHHHHHH--HTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTT
T ss_pred             HHHHHHcCCCHHHHHHHHHH--cCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhh
Confidence            3456654 579999999987  67777787889999999999999998753          3679999999999887666


Q ss_pred             hccCCCCceeecccCCceEEEEecCCceeeEEEceEEEeccceeecCCeEEEEeCcccc
Q 042381          290 LASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFR  348 (353)
Q Consensus       290 l~~l~~g~~l~Tl~~g~~l~v~~~~~~~~~v~vn~a~I~~~di~~~~~gvVH~Id~VL~  348 (353)
                      +   ..+..++|+ .|..+.|+..++.   ++||+++|+.+|+.++| ||||+||+||.
T Consensus        82 l---~~~~~~~tl-~G~~l~v~~~~~~---v~vn~a~v~~~di~a~N-GvIHvID~VLl  132 (132)
T 2vxp_A           82 I---GALVRLKSL-QGDKLEVSLKNNV---VSVNKEPVAEPDIMATN-GVVHVITNVLQ  132 (132)
T ss_dssp             C---SSCEEEEBT-TSSEEEEEEETTE---EEESSCBEEEEEEEETT-EEEEEESSCC-
T ss_pred             c---cCCceEecC-CCCEEEEEEeCCE---EEEeccEEEEcceecCC-EEEEEECcEeC
Confidence            5   346688897 6999999998876   99999999999998875 79999999984

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.90  E-value=2.1e-24  Score=182.75  Aligned_cols=118  Identities=21%  Similarity=0.292  Sum_probs=97.8

Q ss_pred             HHHh-cCChHHHHHHHHHHHHHHHHhhcCCCCeEEEeeCcHHHhhCCh------------hHHHHHhhhcccccccchhh
Q 042381          223 RLLS-SNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSS------------PLLDRIVRLHILPQRFTYKE  289 (353)
Q Consensus       223 ~~L~-~~g~~~~a~aL~~~l~~l~~~l~~~~~~TvFAPtD~Af~~~~~------------~~L~~iL~yHvvp~~~~~~~  289 (353)
                      +.|+ ..+|+.|+.+|+.  +++.+.|.+.++||||||+|+||++++.            +.|+++|+|||+|+++..++
T Consensus         7 ~~l~~~~~~s~f~~~l~~--agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~~~~   84 (137)
T 1w7d_A            7 ETATGAGSFTTLLTAAEA--AGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSSD   84 (137)
T ss_dssp             GGGGSCSSSTTTTHHHHH--TTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCCTTT
T ss_pred             HHHHhCCCHHHHHHHHHH--cCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEcHHH
Confidence            3443 3568888888876  6677778778999999999999999853            23689999999999998887


Q ss_pred             hccCCCCceeecccCCceEEEEecCCceeeEEEceEEEeccceeecCCeEEEEeCccccCCC
Q 042381          290 LASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRDSR  351 (353)
Q Consensus       290 l~~l~~g~~l~Tl~~g~~l~v~~~~~~~~~v~vn~a~I~~~di~~~~~gvVH~Id~VL~~~~  351 (353)
                      +.   .|..++|+ .|..+.|+..+|    ++|||++|+.+|+.++| ||||+||+||.|+.
T Consensus        85 l~---~~~~~~tl-~G~~l~v~~~~g----v~vn~a~v~~~di~~~N-GvIHvID~VL~P~s  137 (137)
T 1w7d_A           85 LT---EGMTAETV-EGGALTVTLEGG----PKVNGVSISQPDVDASN-GVIHVIDGVLMPGA  137 (137)
T ss_dssp             SC---SSEEEECT-TSCEEEEECTTS----CEETTEECSBCCCBCSS-SEEEBCSSCCSSCC
T ss_pred             hc---CCCeeecc-CCceEEEEecCC----EEEeCcEEEECCeecCC-eEEEEECeeeCCCC
Confidence            64   47778887 699999998754    89999999999998775 69999999999873

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.88  E-value=3.4e-23  Score=180.42  Aligned_cols=118  Identities=13%  Similarity=0.218  Sum_probs=99.6

Q ss_pred             HHHHHhc-CChHHHHHHHH-----HHHHHHHHhhcCCCCeEEEeeCcHHHhhCCh----------hHHHHHhhhcccccc
Q 042381          221 IIRLLSS-NGFVSFAIGLH-----SVIDQILEDNINLNSTTIFAPADFAVVASSS----------PLLDRIVRLHILPQR  284 (353)
Q Consensus       221 ~~~~L~~-~g~~~~a~aL~-----~~l~~l~~~l~~~~~~TvFAPtD~Af~~~~~----------~~L~~iL~yHvvp~~  284 (353)
                      +.+.|++ .+|+.|+.+|+     .  +++.+.|.+.+ ||||||+|+||++++.          +.|+++|+|||++++
T Consensus        30 i~~~l~~~~~~s~f~~~l~~~~~~~--agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g~  106 (163)
T 1nyo_A           30 VAVAASNNPELTTLTAALSGQLNPQ--VNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQ  106 (163)
T ss_dssp             HHHHHTTSTTTHHHHHHHHSSSCTT--CCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESC
T ss_pred             HHHHHHhCCCHHHHHHHHHhccccc--cCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECCE
Confidence            4566654 56999999997     5  56667777777 9999999999999875          246899999999999


Q ss_pred             cchhhhccCCCCceeecccCCceEEEEecCCceeeEEEceEEEeccceeecCCeEEEEeCccccCCC
Q 042381          285 FTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRDSR  351 (353)
Q Consensus       285 ~~~~~l~~l~~g~~l~Tl~~g~~l~v~~~~~~~~~v~vn~a~I~~~di~~~~~gvVH~Id~VL~~~~  351 (353)
                      +..++|.    | .++|+ .|+.|.|+..++.   ++||+++|+.+|+.++ +||||+||+||.|+.
T Consensus       107 ~~~~~l~----g-~~~Tl-~G~~l~v~~~~~~---v~vn~a~V~~~di~a~-NGvIHvID~VL~P~~  163 (163)
T 1nyo_A          107 TSPANVV----G-TRQTL-QGASVTVTGQGNS---LKVGNADVVCGGVSTA-NATVYMIDSVLMPPA  163 (163)
T ss_dssp             CCTTTSC----E-EEECT-TSSEEEEEECSSC---EEETTEECSSBCCCCS-SEEEBCBSSCCCCCC
T ss_pred             EcHHHhC----C-ccccC-CCCEEEEEEECCE---EEEeccEEEECceEcC-CEEEEEECcEeCCCC
Confidence            9888874    4 68897 6999999998776   9999999999999876 489999999999874

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.88  E-value=1.3e-22  Score=170.53  Aligned_cols=120  Identities=18%  Similarity=0.231  Sum_probs=99.3

Q ss_pred             hhHHHHHHhC-CcHHHHHHHhcCc--ccccCCCCeEEEEeCCHhhhcCCC--------ChHHHHHhhhccccCCccchhh
Q 042381           51 SNASKALRRS-GFNIIATLLQVSP--EIFLSSHNSTIFAIQDSAISNTSL--------PPWLFKKLLQYHTSPLKLSMND  119 (353)
Q Consensus        51 ~~i~~~L~~~-g~t~la~ll~~~~--~~l~~~~~~TvFAPtd~Af~~~~~--------~~~~l~~lL~yHvvp~~~~~~~  119 (353)
                      .+|.++|++. +|++|+++++.++  +.|.+.+++|||||+|+||++++.        +...++++|+||++|+.+..++
T Consensus         2 ~ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~   81 (132)
T 2vxp_A            2 GTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGG   81 (132)
T ss_dssp             CCHHHHHTTSTTCHHHHHHHHHHTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTT
T ss_pred             ccHHHHHHcCCCHHHHHHHHHHcCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhh
Confidence            3788999864 5999999999987  568778999999999999999861        3446889999999999988888


Q ss_pred             hcCCCCCceeeeeecCceEEEEEccceeeEEEEeeEEEeccceeecCceEEEEeCcccC
Q 042381          120 LLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFS  178 (353)
Q Consensus       120 L~~~~~g~~~~Tll~~~~l~v~~~~~~~~~v~vn~a~V~~~di~~~g~~vVH~Id~vL~  178 (353)
                      +..   +..++| +.|..++|+..++   .++||+++|+.+|+... +|+||+||+||.
T Consensus        82 l~~---~~~~~t-l~G~~l~v~~~~~---~v~vn~a~v~~~di~a~-NGvIHvID~VLl  132 (132)
T 2vxp_A           82 IGA---LVRLKS-LQGDKLEVSLKNN---VVSVNKEPVAEPDIMAT-NGVVHVITNVLQ  132 (132)
T ss_dssp             CSS---CEEEEB-TTSSEEEEEEETT---EEEESSCBEEEEEEEET-TEEEEEESSCC-
T ss_pred             ccC---CceEec-CCCCEEEEEEeCC---EEEEeccEEEEcceecC-CEEEEEECcEeC
Confidence            753   456777 5788999987753   69999999999998753 579999999983

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.87  E-value=1.3e-23  Score=177.79  Aligned_cols=121  Identities=19%  Similarity=0.212  Sum_probs=100.5

Q ss_pred             hhHHHHHHhC-CcHHHHHHHhcCc--ccccCCCCeEEEEeCCHhhhcCCC----------ChHHHHHhhhccccCCccch
Q 042381           51 SNASKALRRS-GFNIIATLLQVSP--EIFLSSHNSTIFAIQDSAISNTSL----------PPWLFKKLLQYHTSPLKLSM  117 (353)
Q Consensus        51 ~~i~~~L~~~-g~t~la~ll~~~~--~~l~~~~~~TvFAPtd~Af~~~~~----------~~~~l~~lL~yHvvp~~~~~  117 (353)
                      .+|.++|++. +|++|+++++.++  +.|.+.+++|||||+|+||++++.          +...++++|+||++++++..
T Consensus         3 ~~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~~   82 (137)
T 1w7d_A            3 GDIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMS   82 (137)
T ss_dssp             STTGGGGGSCSSSTTTTHHHHHTTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCCT
T ss_pred             CCHHHHHHhCCCHHHHHHHHHHcCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEcH
Confidence            3778888754 5999999999997  567778999999999999999862          23357899999999999999


Q ss_pred             hhhcCCCCCceeeeeecCceEEEEEccceeeEEEEeeEEEeccceeecCceEEEEeCcccCCC
Q 042381          118 NDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSL  180 (353)
Q Consensus       118 ~~L~~~~~g~~~~Tll~~~~l~v~~~~~~~~~v~vn~a~V~~~di~~~g~~vVH~Id~vL~p~  180 (353)
                      ++|..   |..+.| +.|..++|+..+   + ++||+++|+.+|+... +|+||+||+||.|+
T Consensus        83 ~~l~~---~~~~~t-l~G~~l~v~~~~---g-v~vn~a~v~~~di~~~-NGvIHvID~VL~P~  136 (137)
T 1w7d_A           83 SDLTE---GMTAET-VEGGALTVTLEG---G-PKVNGVSISQPDVDAS-NGVIHVIDGVLMPG  136 (137)
T ss_dssp             TTSCS---SEEEEC-TTSCEEEEECTT---S-CEETTEECSBCCCBCS-SSEEEBCSSCCSSC
T ss_pred             HHhcC---CCeeec-cCCceEEEEecC---C-EEEeCcEEEECCeecC-CeEEEEECeeeCCC
Confidence            99875   456766 578899998763   4 8999999999998742 45999999999885

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.85  E-value=5.8e-22  Score=172.60  Aligned_cols=121  Identities=17%  Similarity=0.160  Sum_probs=100.9

Q ss_pred             chhhHHHHHHhC-CcHHHHHHHh-----cCc--ccccCCCCeEEEEeCCHhhhcCCC--------ChHHHHHhhhccccC
Q 042381           49 LFSNASKALRRS-GFNIIATLLQ-----VSP--EIFLSSHNSTIFAIQDSAISNTSL--------PPWLFKKLLQYHTSP  112 (353)
Q Consensus        49 ~~~~i~~~L~~~-g~t~la~ll~-----~~~--~~l~~~~~~TvFAPtd~Af~~~~~--------~~~~l~~lL~yHvvp  112 (353)
                      ...+|.++|++. +|++|+++|+     .++  +.|.+.+ +|||||+|+||++++.        +...++++|+||+++
T Consensus        26 ~~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~  104 (163)
T 1nyo_A           26 SQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVA  104 (163)
T ss_dssp             HHSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEE
T ss_pred             CCcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceEC
Confidence            446899999865 4999999999     776  5677777 9999999999999861        234588999999999


Q ss_pred             CccchhhhcCCCCCceeeeeecCceEEEEEccceeeEEEEeeEEEeccceeecCceEEEEeCcccCCC
Q 042381          113 LKLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSL  180 (353)
Q Consensus       113 ~~~~~~~L~~~~~g~~~~Tll~~~~l~v~~~~~~~~~v~vn~a~V~~~di~~~g~~vVH~Id~vL~p~  180 (353)
                      +++..++|.    | .++| +.|..++|+..++   .++||+++|+.+|+.. .+|+||+||+||.|+
T Consensus       105 g~~~~~~l~----g-~~~T-l~G~~l~v~~~~~---~v~vn~a~V~~~di~a-~NGvIHvID~VL~P~  162 (163)
T 1nyo_A          105 GQTSPANVV----G-TRQT-LQGASVTVTGQGN---SLKVGNADVVCGGVST-ANATVYMIDSVLMPP  162 (163)
T ss_dssp             SCCCTTTSC----E-EEEC-TTSSEEEEEECSS---CEEETTEECSSBCCCC-SSEEEBCBSSCCCCC
T ss_pred             CEEcHHHhC----C-cccc-CCCCEEEEEEECC---EEEEeccEEEECceEc-CCEEEEEECcEeCCC
Confidence            999999985    2 5677 4788999988753   6999999999999874 367999999999985

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.75  E-value=2.1e-18  Score=165.52  Aligned_cols=121  Identities=17%  Similarity=0.248  Sum_probs=91.6

Q ss_pred             CChHHHHHHHHHHHHH--HHHhhcCCCCeEEEeeCcHHHhhCC-------hhHHHHHhhhcccccccchhhhccCCC-C-
Q 042381          228 NGFVSFAIGLHSVIDQ--ILEDNINLNSTTIFAPADFAVVASS-------SPLLDRIVRLHILPQRFTYKELASLPG-K-  296 (353)
Q Consensus       228 ~g~~~~a~aL~~~l~~--l~~~l~~~~~~TvFAPtD~Af~~~~-------~~~L~~iL~yHvvp~~~~~~~l~~l~~-g-  296 (353)
                      ..|+.|..+|+.  ++  +.+.|.+.++||||||+|+||.++.       .+.|+++|+|||+++++..++|..... | 
T Consensus        22 ~~~s~~~~~l~~--ag~~l~~~L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~~~~~~l~~~~~~~~   99 (324)
T 1o70_A           22 GALRKFYEVIMD--NGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLI   99 (324)
T ss_dssp             HHHHHHHHHHHH--TCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSC
T ss_pred             CcHHHHHHHHHH--HhHHHHHHHcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCeecHHHHhhccCCCc
Confidence            447788877765  44  6667777899999999999998863       345789999999999999998865331 1 


Q ss_pred             ceeecccCCce-EEEEecCC-ceeeEEEce----EEEeccceeecCCeEEEEeCccccCCCC
Q 042381          297 TLLKTLVPNQY-LVISGGAD-FIQGFDING----VQIFAPEIFSSKQFVIHGISQAFRDSRT  352 (353)
Q Consensus       297 ~~l~Tl~~g~~-l~v~~~~~-~~~~v~vn~----a~I~~~di~~~~~gvVH~Id~VL~~~~~  352 (353)
                      ..++|+. |.. +.+...++ ....+++||    ++|+.+|+.++| ||||+||+||.|+..
T Consensus       100 ~~~~Tl~-g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~~N-GvIhvID~VL~pp~~  159 (324)
T 1o70_A          100 AQVPTVN-NNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTN-GYVHIIDHVLGVPYT  159 (324)
T ss_dssp             CCEEBSS-TTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSS-EEEEEESSCTTSCCS
T ss_pred             eEEEcCC-CCceEEEEEeecCCceEEEEcCCceeEEEEeccccccC-cEEEEEchhhhhchh
Confidence            1688975 654 55554431 123488985    999999998764 799999999999763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	353
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.86
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.83
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.77
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.73
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.72
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.66

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.86  E-value=2.1e-22  Score=173.16  Aligned_cols=113  Identities=12%  Similarity=0.233  Sum_probs=92.8

Q ss_pred             CChHHHHHHHHHHH---HHHHHhhcCCCCeEEEeeCcHHHhhCChh----------HHHHHhhhcccccccchhhhccCC
Q 042381          228 NGFVSFAIGLHSVI---DQILEDNINLNSTTIFAPADFAVVASSSP----------LLDRIVRLHILPQRFTYKELASLP  294 (353)
Q Consensus       228 ~g~~~~a~aL~~~l---~~l~~~l~~~~~~TvFAPtD~Af~~~~~~----------~L~~iL~yHvvp~~~~~~~l~~l~  294 (353)
                      ..|++|..||...+   +++.+.|. .|+||||||+|+||++++..          .|+++|+|||+++++..+++.   
T Consensus        38 p~lstl~~Al~a~~~~~a~L~~~L~-~gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv~g~~~~~~l~---  113 (163)
T d1nyoa_          38 PELTTLTAALSGQLNPQVNLVDTLN-SGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVV---  113 (163)
T ss_dssp             TTTHHHHHHHHSSSCTTCCCHHHHT-SSSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESCCCTTTSC---
T ss_pred             CchHHHHHHHhhccccccchhHhhc-CCCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhhhhhhhhhhhh---
Confidence            45888888885311   34566665 48999999999999998754          368999999999999888763   


Q ss_pred             CCceeecccCCceEEEEecCCceeeEEEceEEEeccceeecCCeEEEEeCccccCCC
Q 042381          295 GKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRDSR  351 (353)
Q Consensus       295 ~g~~l~Tl~~g~~l~v~~~~~~~~~v~vn~a~I~~~di~~~~~gvVH~Id~VL~~~~  351 (353)
                        ..++|+ .|..+.|+..++.   ++||+++|+.+||.++| ||||+||+||.||.
T Consensus       114 --~~~~Tl-~G~~l~v~~~~~~---i~v~~a~Vv~~di~a~N-GvIHvID~VLlPPa  163 (163)
T d1nyoa_         114 --GTRQTL-QGASVTVTGQGNS---LKVGNADVVCGGVSTAN-ATVYMIDSVLMPPA  163 (163)
T ss_dssp             --EEEECT-TSSEEEEEECSSC---EEETTEECSSBCCCCSS-EEEBCBSSCCCCCC
T ss_pred             --hhhhhc-cCcceeEEecCCE---EEEeceEEEECCeecCC-cEEEEECccccCCC
Confidence              246776 7999999998877   99999999999998775 79999999999873

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.83  E-value=2.6e-21  Score=166.25  Aligned_cols=119  Identities=16%  Similarity=0.142  Sum_probs=96.0

Q ss_pred             hhHHHHHHhC-CcHHHHHHHhc-----Cc--ccccCCCCeEEEEeCCHhhhcCC--------CChHHHHHhhhccccCCc
Q 042381           51 SNASKALRRS-GFNIIATLLQV-----SP--EIFLSSHNSTIFAIQDSAISNTS--------LPPWLFKKLLQYHTSPLK  114 (353)
Q Consensus        51 ~~i~~~L~~~-g~t~la~ll~~-----~~--~~l~~~~~~TvFAPtd~Af~~~~--------~~~~~l~~lL~yHvvp~~  114 (353)
                      .++..++++. .|++|..+++.     ++  ++|. .|+||||||+|+||.+++        .+...|+++|+||+++++
T Consensus        28 ~~v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~-~gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv~g~  106 (163)
T d1nyoa_          28 DPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLN-SGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQ  106 (163)
T ss_dssp             SCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHT-SSSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESC
T ss_pred             chHHHHHhcCCchHHHHHHHhhccccccchhHhhc-CCCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhhhhh
Confidence            4566777654 49999999985     33  4565 489999999999999986        123358999999999999


Q ss_pred             cchhhhcCCCCCceeeeeecCceEEEEEccceeeEEEEeeEEEeccceeecCceEEEEeCcccCCC
Q 042381          115 LSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSL  180 (353)
Q Consensus       115 ~~~~~L~~~~~g~~~~Tll~~~~l~v~~~~~~~~~v~vn~a~V~~~di~~~g~~vVH~Id~vL~p~  180 (353)
                      +..+++..     .++| +.|..++|+..+   +.+++|+++|+.+|+.. .||+||+||+||.||
T Consensus       107 ~~~~~l~~-----~~~T-l~G~~l~v~~~~---~~i~v~~a~Vv~~di~a-~NGvIHvID~VLlPP  162 (163)
T d1nyoa_         107 TSPANVVG-----TRQT-LQGASVTVTGQG---NSLKVGNADVVCGGVST-ANATVYMIDSVLMPP  162 (163)
T ss_dssp             CCTTTSCE-----EEEC-TTSSEEEEEECS---SCEEETTEECSSBCCCC-SSEEEBCBSSCCCCC
T ss_pred             hhhhhhhh-----hhhh-ccCcceeEEecC---CEEEEeceEEEECCeec-CCcEEEEECccccCC
Confidence            99988752     3556 678999998875   37999999999999874 357999999999986

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.77  E-value=4.5e-19  Score=147.55  Aligned_cols=120  Identities=16%  Similarity=0.207  Sum_probs=81.7

Q ss_pred             hHHHHHHHHHHHHHHHHhhcCCCCeEEEeeCcHHHhhCChh-------HHHHHhhhcccccccchhhhccCCC--Cceee
Q 042381          230 FVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSP-------LLDRIVRLHILPQRFTYKELASLPG--KTLLK  300 (353)
Q Consensus       230 ~~~~a~aL~~~l~~l~~~l~~~~~~TvFAPtD~Af~~~~~~-------~L~~iL~yHvvp~~~~~~~l~~l~~--g~~l~  300 (353)
                      |+.|+.+++..-..+.+.+.+.+++|||||+|+||.++...       .|+++|+|||+|+++...++.....  ...++
T Consensus         6 ~~~f~~~i~~~g~~~~~~l~~~~~~TvFAPtn~Af~~~~~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~~~~~~~~~~   85 (140)
T d1o70a1           6 LRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQVP   85 (140)
T ss_dssp             HHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCCCEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHhcCChhhhcCCHHHHHHHHHhhccCCeEEHHHHhcCcccCceEee
Confidence            34444444331012445566678999999999999987543       4689999999999999888864321  23578


Q ss_pred             cccCCceEEEEecCCce-eeEEE----ceEEEeccceeecCCeEEEEeCccccCC
Q 042381          301 TLVPNQYLVISGGADFI-QGFDI----NGVQIFAPEIFSSKQFVIHGISQAFRDS  350 (353)
Q Consensus       301 Tl~~g~~l~v~~~~~~~-~~v~v----n~a~I~~~di~~~~~gvVH~Id~VL~~~  350 (353)
                      |+..+.........+.. ..+.+    +.++|+.+|+.+.| ||||+||+||.+|
T Consensus        86 t~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~~~N-GvIH~ID~VL~~P  139 (140)
T d1o70a1          86 TVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTN-GYVHIIDHVLGVP  139 (140)
T ss_dssp             BSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSS-EEEEEESSCTTSC
T ss_pred             ecCCCceEEEEEeccceeEEEEecCCcceEEEEeCCEecCC-eEEEEECCccCCc
Confidence            87544444444333221 12444    34899999998765 7999999999987

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.73  E-value=2.6e-18  Score=142.83  Aligned_cols=121  Identities=13%  Similarity=0.116  Sum_probs=86.2

Q ss_pred             hCCcHHHHHHHhcCc----ccccCCCCeEEEEeCCHhhhcCCC-----ChHHHHHhhhccccCCccchhhhcCCCC--Cc
Q 042381           59 RSGFNIIATLLQVSP----EIFLSSHNSTIFAIQDSAISNTSL-----PPWLFKKLLQYHTSPLKLSMNDLLMKPQ--GS  127 (353)
Q Consensus        59 ~~g~t~la~ll~~~~----~~l~~~~~~TvFAPtd~Af~~~~~-----~~~~l~~lL~yHvvp~~~~~~~L~~~~~--g~  127 (353)
                      +.+|+.|.++++.++    +.+...+++|||||+|+||+++..     +...++++|+||++++++..++|.....  ..
T Consensus         3 ~~~~~~f~~~i~~~g~~~~~~l~~~~~~TvFAPtn~Af~~~~~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~~~~~~~   82 (140)
T d1o70a1           3 NGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIA   82 (140)
T ss_dssp             HHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCC
T ss_pred             CccHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHhcCChhhhcCCHHHHHHHHHhhccCCeEEHHHHhcCcccCce
Confidence            456999999999875    346667899999999999998762     3446899999999999999988864321  12


Q ss_pred             eeeeeecCceEEEEEccc-eeeEEEE----eeEEEeccceeecCceEEEEeCcccCCC
Q 042381          128 CLPTFLHQKKVAITKIVV-KERLIEI----NNVLVSRPDIFLEGSLSIHGVLEPFSSL  180 (353)
Q Consensus       128 ~~~Tll~~~~l~v~~~~~-~~~~v~v----n~a~V~~~di~~~g~~vVH~Id~vL~p~  180 (353)
                      .++|+..+........+. ....+.+    +.++|+.+|+.. .+||||.||+||.||
T Consensus        83 ~~~t~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~~-~NGvIH~ID~VL~~P  139 (140)
T d1o70a1          83 QVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQ-TNGYVHIIDHVLGVP  139 (140)
T ss_dssp             CEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEEC-SSEEEEEESSCTTSC
T ss_pred             EeeecCCCceEEEEEeccceeEEEEecCCcceEEEEeCCEec-CCeEEEEECCccCCc
Confidence            355644443333332221 1223444    348999999874 356999999999886

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.72  E-value=3.2e-18  Score=145.25  Aligned_cols=118  Identities=14%  Similarity=0.135  Sum_probs=78.1

Q ss_pred             CChHHHHHHHHHHHHHHHHhhcC-CCCeEEEeeCcHHHhhCCh---------------hHHHHHhhhcccccccchhhh-
Q 042381          228 NGFVSFAIGLHSVIDQILEDNIN-LNSTTIFAPADFAVVASSS---------------PLLDRIVRLHILPQRFTYKEL-  290 (353)
Q Consensus       228 ~g~~~~a~aL~~~l~~l~~~l~~-~~~~TvFAPtD~Af~~~~~---------------~~L~~iL~yHvvp~~~~~~~l-  290 (353)
                      -.|+.|..+++.  +++...|.. .++||||||+|+||+++..               +.|+++|+|||+|++..+.+. 
T Consensus        11 p~ls~~~~~~~~--s~l~~~L~~~~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~g~~~~~~~~   88 (157)
T d1o70a2          11 PMMSDTYKMGKF--SHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDKEYTMKD   88 (157)
T ss_dssp             GGGHHHHHHTTT--TTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESSCCCHHH
T ss_pred             ccHHHHHHHHHh--CCHHHHHhCCCCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEecccccchhhh
Confidence            346666665543  445555554 4689999999999998631               236899999999987643221 


Q ss_pred             -c---cCCCCceeecccCCceEEEEecCCceeeEEE----ceEEEeccceeecCCeEEEEeCccccCCC
Q 042381          291 -A---SLPGKTLLKTLVPNQYLVISGGADFIQGFDI----NGVQIFAPEIFSSKQFVIHGISQAFRDSR  351 (353)
Q Consensus       291 -~---~l~~g~~l~Tl~~g~~l~v~~~~~~~~~v~v----n~a~I~~~di~~~~~gvVH~Id~VL~~~~  351 (353)
                       .   ........+++.+...+.+...++.   +.+    |+++|+.+|+.+.| ||||+||+||.|++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~a~V~~~Di~a~N-GviHvID~VLlp~~  153 (157)
T d1o70a2          89 LVKFSQESGSVILPTFRDSLSIRVEEEAGR---YVIIWNYKKINVYRPDVECTN-GIIHVIDYPLLEEK  153 (157)
T ss_dssp             HHHHHHHSSSEEEECSSSEEEEEEEEETTE---EEEEETTEEEEEEEEEEEETT-EEEEEESSCSCCTT
T ss_pred             hhhhhccCCceeEEecCCcEEEEEEcCCcE---EEEecCCccceEEECCEecCC-eEEEEECceecCCC
Confidence             1   1112334455532234445555553   333    56999999999875 79999999999865

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.66  E-value=5.4e-17  Score=137.52  Aligned_cols=125  Identities=18%  Similarity=0.144  Sum_probs=83.6

Q ss_pred             hHHHHHHhCC-cHHHHHHHhcCc--ccccC-CCCeEEEEeCCHhhhcCCC-------------ChHHHHHhhhccccCCc
Q 042381           52 NASKALRRSG-FNIIATLLQVSP--EIFLS-SHNSTIFAIQDSAISNTSL-------------PPWLFKKLLQYHTSPLK  114 (353)
Q Consensus        52 ~i~~~L~~~g-~t~la~ll~~~~--~~l~~-~~~~TvFAPtd~Af~~~~~-------------~~~~l~~lL~yHvvp~~  114 (353)
                      ++.++|+... |+.|..+++.++  ..|.+ .+++|||||+|+||+++..             ....++.+|+||++++.
T Consensus         2 Ti~~~l~~~p~ls~~~~~~~~s~l~~~L~~~~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~g~   81 (157)
T d1o70a2           2 TVLGKLESDPMMSDTYKMGKFSHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISD   81 (157)
T ss_dssp             CHHHHHHHCGGGHHHHHHTTTTTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEES
T ss_pred             cHHHHHHhCccHHHHHHHHHhCCHHHHHhCCCCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEeccc
Confidence            5778888554 999999999887  45665 4789999999999998641             12357899999999986


Q ss_pred             cchhhh--cC---CCCCceeeeeecCceEEEEEccceeeEEEE----eeEEEeccceeecCceEEEEeCcccCCC
Q 042381          115 LSMNDL--LM---KPQGSCLPTFLHQKKVAITKIVVKERLIEI----NNVLVSRPDIFLEGSLSIHGVLEPFSSL  180 (353)
Q Consensus       115 ~~~~~L--~~---~~~g~~~~Tll~~~~l~v~~~~~~~~~v~v----n~a~V~~~di~~~g~~vVH~Id~vL~p~  180 (353)
                      ....+.  ..   ........++..+..+.+...++   .+.+    |+++|+.+|+... +|+||.||+||.|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~V~~~Di~a~-NGviHvID~VLlp~  152 (157)
T d1o70a2          82 KEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEAG---RYVIIWNYKKINVYRPDVECT-NGIIHVIDYPLLEE  152 (157)
T ss_dssp             SCCCHHHHHHHHHHSSSEEEECSSSEEEEEEEEETT---EEEEEETTEEEEEEEEEEEET-TEEEEEESSCSCCT
T ss_pred             ccchhhhhhhhhccCCceeEEecCCcEEEEEEcCCc---EEEEecCCccceEEECCEecC-CeEEEEECceecCC
Confidence            543321  11   01112233322223344444432   3333    5799999999753 56999999999884