Citrus Sinensis ID: 042396

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470--
CLEKPHKPQYGGGIIKNPELSHGLKGWSAFGNAKIEQRESGGNNSCISQKVYLEKNKFYTLSAWIQVSEGAAPVTAVFKTITGFKHAGAAVAESKCWSMLKGGLSPDASGFAELYFESKNTSVDIWVDSISLQPFTQEEWRSQQHQSIEKNHKTNVRIQAVDKQGKPLQNANISIEQKQLRFPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDYSASDAMLQFAKNHNIAVRGHNIFWDDPQYQPGWVNSLSPSDLSKAADKRINSVTSRYKGQVIAWDVVNENLHFSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPAMYLQKLRQISEFPGNQNLRIGIGLESHFSTPNIPYMRASIDTLGATGLPIWLTEVDVQSSPNQAQYLEQILREAHAHPKVQGIVVWAAWKPSGCYRMCLTDNNFKNLATGDVVDKLLHEWGSK
cccccccccccccEEEcccccccccccEEcccEEEEEEccccccccEEEEEEEEcccEEEEEEEEEEEcccccEEEEEEEcccEEEEEEEEEEcccEEEEEEEEEccccccEEEEEEEccccEEEEEccEEEEcccHHHHHHHHHHHHHHHccccEEEEEEccccccccccccHHHHHcccccEEEEEcccccccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEccccccccHHHHccccHHHHHHHHHHHHHccccEEEEEccccccccccccccHHHHHHHHHHHHccccccccEEEEEEccccccccHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHccccccEEEEccEEccccccccccccccccccHHHHHHHHHHHHHccc
cccccccccccccEEEcccccccccccccccEEEEEEcccccccccEEEEEEEEcccEEEEEEEEEEccccccEEEEEEEcccEEEEEEEEEccccEEEEEEEEEEcccccEEEEEEccccccEEEEEcEEEEcccHHHHHHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHcccccccEEccHHHcccHHHHHHHHHHccEEEccccccccccccccccccccHHHHHHHHHHHcccEEEEEEEEEcccccccHHHHcccHHHHHHHHHHHHHHHHHHccccccEEEEEEcHHcccHHHHHHccHHHHHHHHHHHHHccccEEEEEccccccccccccccHHHHHHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEEEcccccccccEEEEccccccccHHHHHHHHHHHHccc
clekphkpqygggiiknpelshglkgwsafgNAKIeqresggnnscisQKVYLEKNKFYTLSAWIQVSEGAAPVTAVFKTITGFKHAGAAVAESKCWsmlkgglspdasgfAELYfeskntsvdiwvdsislqpftqeEWRSQQHQSIEKNHKTNVRIQAVdkqgkplqnanisieqkqlrfpfgcainkniltnTAYQNWFTSRFKVTAFEDEMKwysteaspgredysaSDAMLQFAKNHNiavrghnifwddpqyqpgwvnslspsdlskaADKRINSVTSRYKGQVIAWDVVNENLHFSFfesklgqnasgvffnrvhsldgattlfmndyntiedsrdgkatPAMYLQKLRQisefpgnqnlrigigleshfstpnipyMRASIDtlgatglpiwltevdvqsspnQAQYLEQILREAHAHPKVQGIVVWAAwkpsgcyrmcltdnnfknlatgDVVDKLLHEWGSK
clekphkpqygggiiknpelsHGLKGWSAFGNAKIEQresggnnsCISQKVYLEKNKFYTLSAWIQVSEGAAPVTAVFKTITGFKHAGAAVAESKCWSMLKGGLSPDASGFAELYFESKNTSVDIWVDSISLQPFTQEEWRSQQHQsieknhktnVRIQAVDKQGKPLQNANISIEQKQLRFPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDYSASDAMLQFAKNHNIAVRGHNIFWDDPQYQPGWVNSLSPSDLSKAADKRINSVTSRYKGQVIAWDVVNENLHFSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPAMYLQKLRQISEFPGNQNLRIGIGLESHFSTPNIPYMRASIDTLGATGLPIWLTEVDVQSSPNQAQYLEQILREAHAHPKVQGIVVWAAWKPSGCYRMCLTDNNFKNLATGDVVDKLLHEWGSK
CLEKPHKPQYGGGIIKNPELSHGLKGWSAFGNAKIEQRESGGNNSCISQKVYLEKNKFYTLSAWIQVSEGAAPVTAVFKTITGFKHAGAAVAESKCWSMLKGGLSPDASGFAELYFESKNTSVDIWVDSISLQPFTQEEWRSQQHQSIEKNHKTNVRIQAVDKQGKPLQNANISIEQKQLRFPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDYSASDAMLQFAKNHNIAVRGHNIFWDDPQYQPGWVNSLSPSDLSKAADKRINSVTSRYKGQVIAWDVVNENLHFSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPAMYLQKLRQISEFPGNQNLRIGIGLESHFSTPNIPYMRASIDTLGATGLPIWLTEVDVQSSPNQAQYLEQILREAHAHPKVQGIVVWAAWKPSGCYRMCLTDNNFKNLATGDVVDKLLHEWGSK
********************SHGLKGWSAFGNA**********NSCISQKVYLEKNKFYTLSAWIQVSEGAAPVTAVFKTITGFKHAGAAVAESKCWSMLKGGLSPDASGFAELYFESKNTSVDIWVDSISLQPFT***********************************NISIEQKQLRFPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYS**************AMLQFAKNHNIAVRGHNIFWDDPQYQPGWVNS*************INSVTSRYKGQVIAWDVVNENLHFSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIED*****ATPAMYLQKLRQISEFPGNQNLRIGIGLESHFSTPNIPYMRASIDTLGATGLPIWLTEVDVQSSPNQAQYLEQILREAHAHPKVQGIVVWAAWKPSGCYRMCLTDNNFKNLATGDVVDKLLHEW***
***KPHKPQYGGGIIKNPELSHGLKGWSAFGNAKIE******NNSCISQKVYLEKNKFYTLSAWIQVSEGAAPVTAVFKTITGFKHAGAAVAESKCWSMLKGGLSPDASGFAELYFESKNTSVDIWVDSISLQPFTQEEWRSQQHQSIEKNHKTNVRIQAVDKQGKPLQNANISIEQKQLRFPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDYSASDAMLQFAKNHNIAVRGHNIFWDDPQYQPGWVNSLSPSDLSKAADKRINSVTSRYKGQVIAWDVVNENLHFSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPAMYLQKLRQISEFPGNQNLRIGIGLESHFSTPNIPYMRASIDTLGATGLPIWLTEVDVQSSPNQAQYLEQILREAHAHPKVQGIVVWAAWKPSGCYRMCLTDNNFKNLATGDVVDKLLHEWGS*
CLEKPHKPQYGGGIIKNPELSHGLKGWSAFGNAKIEQRESGGNNSCISQKVYLEKNKFYTLSAWIQVSEGAAPVTAVFKTITGFKHAGAAVAESKCWSMLKGGLSPDASGFAELYFESKNTSVDIWVDSISLQPFT**************NHKTNVRIQAVDKQGKPLQNANISIEQKQLRFPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYST**********ASDAMLQFAKNHNIAVRGHNIFWDDPQYQPGWVNSLSPSDLSKAADKRINSVTSRYKGQVIAWDVVNENLHFSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPAMYLQKLRQISEFPGNQNLRIGIGLESHFSTPNIPYMRASIDTLGATGLPIWLTEVDVQSSPNQAQYLEQILREAHAHPKVQGIVVWAAWKPSGCYRMCLTDNNFKNLATGDVVDKLLHEWGSK
CLEKPHKPQYGGGIIKNPELSHGLKGWSAFGNAKIEQRESGGNNSCISQKVYLEKNKFYTLSAWIQVSEGAAPVTAVFKTITGFKHAGAAVAESKCWSMLKGGLSPDASGFAELYFESKNTSVDIWVDSISLQPFTQEEWRSQQHQSIEKNHKTNVRIQAVDKQGKPLQNANISIEQKQLRFPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDYSASDAMLQFAKNHNIAVRGHNIFWDDPQYQPGWVNSLSPSDLSKAADKRINSVTSRYKGQVIAWDVVNENLHFSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPAMYLQKLRQISEFPGNQNLRIGIGLESHFSTPNIPYMRASIDTLGATGLPIWLTEVDVQSSPNQAQYLEQILREAHAHPKVQGIVVWAAWKPSGCYRMCLTDNNFKNLATGDVVDKLLHEWGS*
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CLEKPHKPQYGGGIIKNPELSHGLKGWSAFGNAKIEQRESGGNNSCISQKVYLEKNKFYTLSAWIQVSEGAAPVTAVFKTITGFKHAGAAVAESKCWSMLKGGLSPDASGFAELYFESKNTSVDIWVDSISLQPFTQEEWRSQQHQSIEKNHKTNVRIQAVDKQGKPLQNANISIEQKQLRFPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDYSASDAMLQFAKNHNIAVRGHNIFWDDPQYQPGWVNSLSPSDLSKAADKRINSVTSRYKGQVIAWDVVNENLHFSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPAMYLQKLRQISEFPGNQNLRIGIGLESHFSTPNIPYMRASIDTLGATGLPIWLTEVDVQSSPNQAQYLEQILREAHAHPKVQGIVVWAAWKPSGCYRMCLTDNNFKNLATGDVVDKLLHEWGSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query472 2.2.26 [Sep-21-2011]
Q0H904325 Endo-1,4-beta-xylanase C yes no 0.512 0.744 0.288 8e-24
P26514 477 Endo-1,4-beta-xylanase A N/A no 0.512 0.507 0.311 1e-22
B0Y6E0316 Probable endo-1,4-beta-xy N/A no 0.493 0.737 0.288 4e-22
O94163327 Endo-1,4-beta-xylanase F1 yes no 0.544 0.785 0.291 5e-22
Q96VB6323 Endo-1,4-beta-xylanase F3 yes no 0.506 0.739 0.294 1e-21
Q00177327 Endo-1,4-beta-xylanase C yes no 0.510 0.737 0.304 2e-21
A1CHQ0317 Probable endo-1,4-beta-xy N/A no 0.495 0.738 0.303 2e-21
A1CX14314 Probable endo-1,4-beta-xy N/A no 0.578 0.869 0.266 4e-21
Q4JHP5326 Probable endo-1,4-beta-xy N/A no 0.546 0.791 0.270 5e-20
Q0CBM8326 Probable endo-1,4-beta-xy N/A no 0.546 0.791 0.266 7e-20
>sp|Q0H904|XYNC_ASPFU Endo-1,4-beta-xylanase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=xlnC PE=2 SV=2 Back     alignment and function desciption
 Score =  112 bits (279), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 132/260 (50%), Gaps = 18/260 (6%)

Query: 184 FGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDYSASDAMLQFAKNHN 243
           FG A ++ +L  +  +      F     E+ MKW +TE S GR +++ +D ++ +AK + 
Sbjct: 42  FGTASDQALLQKSQNEAIVRKDFGQLTPENSMKWDATEPSQGRFNFAGADFLVNYAKQNG 101

Query: 244 IAVRGHNIFWDDPQYQPGWVNSLSPSD-LSKAADKRINSVTSRYKGQVIAWDVVNE---- 298
             VRGH + W      P WV+++S  + L+      I +V +RYKGQ+ AWDVVNE    
Sbjct: 102 KKVRGHTLVWHSQ--LPSWVSAISDKNTLTSVLKNHITTVMTRYKGQIYAWDVVNEIFNE 159

Query: 299 --NLHFSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPAMYLQKLR 356
             +L  S F   LG++   + F    S+D +  L++NDYN ++ +  GK    +   K  
Sbjct: 160 DGSLRDSVFSRVLGEDFVRIAFETARSVDPSAKLYINDYN-LDSASYGKTQGMVRYVKKW 218

Query: 357 QISEFPGNQNLRIGIGLESHFSTPNIPYMRASIDTLGATGLP-IWLTEVDVQSSPNQAQY 415
             +  P +     GIG ++H        ++ ++  L ++G+  + +TE+D+  + +Q  Y
Sbjct: 219 LAAGIPID-----GIGTQTHLGAGASSSVKGALTALASSGVSEVAITELDIAGASSQ-DY 272

Query: 416 LEQILREAHAHPKVQGIVVW 435
           +  +++     PK  GI VW
Sbjct: 273 V-NVVKACLDVPKCVGITVW 291
Endo-1,4-beta-xylanase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose.
Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 8
>sp|P26514|XYNA_STRLI Endo-1,4-beta-xylanase A OS=Streptomyces lividans GN=xlnA PE=1 SV=2 Back     alignment and function description
>sp|B0Y6E0|XYNC_ASPFC Probable endo-1,4-beta-xylanase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=xlnC PE=2 SV=2 Back     alignment and function description
>sp|O94163|XYNF1_ASPOR Endo-1,4-beta-xylanase F1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=xynF1 PE=1 SV=1 Back     alignment and function description
>sp|Q96VB6|XYNF3_ASPOR Endo-1,4-beta-xylanase F3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=xynF3 PE=1 SV=1 Back     alignment and function description
>sp|Q00177|XYNC_EMENI Endo-1,4-beta-xylanase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=xlnC PE=1 SV=1 Back     alignment and function description
>sp|A1CHQ0|XYNC_ASPCL Probable endo-1,4-beta-xylanase C OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=xlnC PE=2 SV=1 Back     alignment and function description
>sp|A1CX14|XYNC_NEOFI Probable endo-1,4-beta-xylanase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=xlnC PE=2 SV=1 Back     alignment and function description
>sp|Q4JHP5|XYNC_ASPTE Probable endo-1,4-beta-xylanase C OS=Aspergillus terreus GN=xlnC PE=2 SV=1 Back     alignment and function description
>sp|Q0CBM8|XYNC_ASPTN Probable endo-1,4-beta-xylanase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=xlnC PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query472
255583311569 Endo-1,4-beta-xylanase C precursor, puta 0.993 0.824 0.720 0.0
23429644 584 endoxylanase [Carica papaya] 0.991 0.801 0.701 0.0
224103751524 predicted protein [Populus trichocarpa] 0.995 0.896 0.695 0.0
357503165570 Endo-1,4-beta-xylanase C [Medicago trunc 0.991 0.821 0.648 0.0
225428997 658 PREDICTED: endo-1,4-beta-xylanase A-like 0.985 0.706 0.663 0.0
296083046 1130 unnamed protein product [Vitis vinifera] 0.985 0.411 0.663 0.0
225428999 574 PREDICTED: endo-1,4-beta-xylanase A-like 0.997 0.820 0.645 0.0
297798534 577 glycosyl hydrolase family 10 protein [Ar 0.995 0.814 0.633 0.0
297798536 576 glycosyl hydrolase family 10 protein [Ar 0.995 0.815 0.636 0.0
356541019 584 PREDICTED: endo-1,4-beta-xylanase Z-like 0.993 0.803 0.636 0.0
>gi|255583311|ref|XP_002532418.1| Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] gi|223527867|gb|EEF29959.1| Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/480 (72%), Positives = 394/480 (82%), Gaps = 11/480 (2%)

Query: 1   CLEKPHKPQYGGGIIKNPELSHGLKGWSAFGNAKIEQRESGGNNSCI-----------SQ 49
           CL +PH+ QY GGII NPEL+ GLKGWSAFG+AKIE RE  GN   +           SQ
Sbjct: 31  CLARPHEAQYHGGIIMNPELNDGLKGWSAFGDAKIEHREFEGNKFIVAHTRATPYDSPSQ 90

Query: 50  KVYLEKNKFYTLSAWIQVSEGAAPVTAVFKTITGFKHAGAAVAESKCWSMLKGGLSPDAS 109
            +YL KN+ YT SAWIQVSEG+ PV+A+FKT  GFKHAGA VAES CWSMLKGGL+ DAS
Sbjct: 91  DLYLLKNRLYTFSAWIQVSEGSVPVSAIFKTKNGFKHAGAIVAESNCWSMLKGGLTVDAS 150

Query: 110 GFAELYFESKNTSVDIWVDSISLQPFTQEEWRSQQHQSIEKNHKTNVRIQAVDKQGKPLQ 169
           G A+LYFESKNTSV+IWVDSISLQPFT+++W+S Q  SIEKN K  VRIQAVDKQG PL 
Sbjct: 151 GPAQLYFESKNTSVEIWVDSISLQPFTEKQWKSHQDHSIEKNRKAKVRIQAVDKQGNPLI 210

Query: 170 NANISIEQKQLRFPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDY 229
           NANISI+QK+  FPFGCAINKNIL+N  YQNWFTSRF VT FE+EMKWYSTE + G  DY
Sbjct: 211 NANISIQQKKTSFPFGCAINKNILSNPDYQNWFTSRFTVTVFENEMKWYSTERTRGNLDY 270

Query: 230 SASDAMLQFAKNHNIAVRGHNIFWDDPQYQPGWVNSLSPSDLSKAADKRINSVTSRYKGQ 289
           S  DAM+QFAK HNIAVRGHN+FWDDP++QPGWVNSLS SDL++A   R+NSV SRYKGQ
Sbjct: 271 SVPDAMIQFAKQHNIAVRGHNVFWDDPKFQPGWVNSLSQSDLNRATINRLNSVMSRYKGQ 330

Query: 290 VIAWDVVNENLHFSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPA 349
           VI WDVVNENLHF+FFESKLGQNAS VF+N     DG+TTLF+N+YNTIE+S DG A+PA
Sbjct: 331 VIGWDVVNENLHFNFFESKLGQNASSVFYNLAQKADGSTTLFLNEYNTIEESGDGNASPA 390

Query: 350 MYLQKLRQISEFPGNQNLRIGIGLESHFSTPNIPYMRASIDTLGATGLPIWLTEVDVQSS 409
            YLQKLR I  FPGN+ L + IGLE+HFSTPN+PYMR+SIDTL A   PIWLTEVDVQS+
Sbjct: 391 KYLQKLRDIKSFPGNEILNLAIGLEAHFSTPNLPYMRSSIDTLAAANFPIWLTEVDVQSN 450

Query: 410 PNQAQYLEQILREAHAHPKVQGIVVWAAWKPSGCYRMCLTDNNFKNLATGDVVDKLLHEW 469
           PNQAQYLEQ+L E H+HPKV GIV+W+AW P GCYRMCLTDNNFKNL TGDVVDKL+ +W
Sbjct: 451 PNQAQYLEQVLTEVHSHPKVAGIVIWSAWSPQGCYRMCLTDNNFKNLPTGDVVDKLMGKW 510

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|23429644|gb|AAN10199.1| endoxylanase [Carica papaya] Back     alignment and taxonomy information
>gi|224103751|ref|XP_002313180.1| predicted protein [Populus trichocarpa] gi|222849588|gb|EEE87135.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357503165|ref|XP_003621871.1| Endo-1,4-beta-xylanase C [Medicago truncatula] gi|355496886|gb|AES78089.1| Endo-1,4-beta-xylanase C [Medicago truncatula] Back     alignment and taxonomy information
>gi|225428997|ref|XP_002264556.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296083046|emb|CBI22450.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225428999|ref|XP_002264605.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297798534|ref|XP_002867151.1| glycosyl hydrolase family 10 protein [Arabidopsis lyrata subsp. lyrata] gi|297312987|gb|EFH43410.1| glycosyl hydrolase family 10 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297798536|ref|XP_002867152.1| glycosyl hydrolase family 10 protein [Arabidopsis lyrata subsp. lyrata] gi|297312988|gb|EFH43411.1| glycosyl hydrolase family 10 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356541019|ref|XP_003538981.1| PREDICTED: endo-1,4-beta-xylanase Z-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query472
TAIR|locus:2118894576 AT4G33840 [Arabidopsis thalian 0.995 0.815 0.632 9.4e-169
TAIR|locus:2118914576 AT4G33860 [Arabidopsis thalian 0.995 0.815 0.626 4.7e-167
TAIR|locus:2118884576 AT4G33830 [Arabidopsis thalian 0.993 0.814 0.612 5.7e-162
TAIR|locus:2118879570 AT4G33820 [Arabidopsis thalian 0.972 0.805 0.426 1.5e-106
TAIR|locus:2064241570 AT2G14690 [Arabidopsis thalian 0.927 0.768 0.417 1.1e-101
TAIR|locus:2121174562 AT4G38650 [Arabidopsis thalian 0.968 0.813 0.415 5e-99
TAIR|locus:2121788277 AT4G38300 [Arabidopsis thalian 0.516 0.880 0.437 1.3e-59
TAIR|locus:2128833752 AT4G08160 [Arabidopsis thalian 0.798 0.501 0.303 4.2e-54
TAIR|locus:2016595917 RXF12 [Arabidopsis thaliana (t 0.796 0.410 0.304 6.7e-51
TAIR|locus:22019111063 AT1G10050 [Arabidopsis thalian 0.828 0.367 0.295 1.9e-49
TAIR|locus:2118894 AT4G33840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1641 (582.7 bits), Expect = 9.4e-169, P = 9.4e-169
 Identities = 305/482 (63%), Positives = 365/482 (75%)

Query:     1 CLEKPHKPQYGGGIIKNPELSHGLKGWSAFGNAKIEQRESGGN-----------NSCISQ 49
             CLE P+KPQY GGII NP+L +G +GWS FGNAK++ RE GGN           +  ISQ
Sbjct:    33 CLENPYKPQYNGGIIVNPDLQNGSQGWSQFGNAKVDFREFGGNKFVVATQRNQSSDSISQ 92

Query:    50 KVYLEKNKFYTLSAWIQVSEGAAPVTAVFKTITGFKHAGAAVAESKCWSMLKGGLSPDAS 109
             KVYLEK   YT SAW+QVS G +PV+AVFK    +KHAG+ VAESKCWSMLKGGL+ D S
Sbjct:    93 KVYLEKGILYTFSAWLQVSIGKSPVSAVFKKNGEYKHAGSVVAESKCWSMLKGGLTVDES 152

Query:   110 GFAELYFESKNTSVDIWVDSISLQPFTQEEWRSQQHQSIEKNHKTNVRIQAVDKQGKPLQ 169
             G AEL+FES+NT V+IWVDS+SLQPFTQEEW S   QSI K  K  VRI+ ++ +G+ + 
Sbjct:   153 GPAELFFESENTMVEIWVDSVSLQPFTQEEWNSHHEQSIGKVRKGTVRIRVMNNKGETIP 212

Query:   170 NANISIEQKQLRFPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDY 229
             NA ISIEQK+L +PFGCA+  NIL N AYQNWFT RF VT F +EMKWYSTE   G+EDY
Sbjct:   213 NATISIEQKKLGYPFGCAVENNILGNQAYQNWFTQRFTVTTFGNEMKWYSTERIRGQEDY 272

Query:   230 SASDAMLQFAKNHNIAVRGHNIFWDDPQYQPGWVNSLSPSDLSKAADKRINSVTSRYKGQ 289
             S +DAML F K+H IAVRGHN+ WDDP+YQPGWVNSLS +DL  A  +R+ SV SRYKGQ
Sbjct:   273 STADAMLSFFKSHGIAVRGHNVLWDDPKYQPGWVNSLSGNDLYNAVKRRVYSVVSRYKGQ 332

Query:   290 VIAWDVVNENLHFSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPA 349
             ++ WDVVNENLHFSFFESK G  AS   +   H++D  T +FMN+YNT+E  +D  ++PA
Sbjct:   333 LLGWDVVNENLHFSFFESKFGPKASYNTYTMAHAVDPRTPMFMNEYNTLEQPKDLTSSPA 392

Query:   350 MYLQKLRQISEFPGNQNLRIGIGLESHFSTPNIPYMRASIDTLGATGLPIWLTEVDVQSS 409
              YL KLR++        + + IGLESHFSTPNIPYMR+++DT GATGLPIWLTE+DV + 
Sbjct:   393 RYLGKLRELQSIRVAGKIPLAIGLESHFSTPNIPYMRSALDTFGATGLPIWLTEIDVDAP 452

Query:   410 PN-QAQYLEQILREAHAHPKVQGIVVWAAWKPSGCYRMCLTDNNFKNLATGDVVDKLLHE 468
             PN +A Y EQ+LRE HAHPKV G+V+W  + PSGCYRMCLTD NFKNL TGDVVDKLL E
Sbjct:   453 PNVRANYFEQVLREGHAHPKVNGMVMWTGYSPSGCYRMCLTDGNFKNLPTGDVVDKLLRE 512

Query:   469 WG 470
             WG
Sbjct:   513 WG 514
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
TAIR|locus:2118914 AT4G33860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118884 AT4G33830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118879 AT4G33820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2064241 AT2G14690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121174 AT4G38650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121788 AT4G38300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128833 AT4G08160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016595 RXF12 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201911 AT1G10050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.8LOW CONFIDENCE prediction!
3rd Layer3.2.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.IX.2558.1
hypothetical protein (524 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query472
smart00633263 smart00633, Glyco_10, Glycosyl hydrolase family 10 7e-79
pfam00331308 pfam00331, Glyco_hydro_10, Glycosyl hydrolase fami 7e-56
COG3693345 COG3693, XynA, Beta-1,4-xylanase [Carbohydrate tra 8e-32
>gnl|CDD|214750 smart00633, Glyco_10, Glycosyl hydrolase family 10 Back     alignment and domain information 
 Score =  245 bits (629), Expect = 7e-79
 Identities = 93/275 (33%), Positives = 131/275 (47%), Gaps = 39/275 (14%)

Query: 215 MKWYSTEASPGREDYSASDAMLQFAKNHNIAVRGHNIFWDDPQYQPGWVNSL---SPSDL 271
           MKW STE S G+ ++S +DA++ FAK + I VRGH + W      P WV +L       L
Sbjct: 1   MKWDSTEPSRGQFNFSGADAIVNFAKENGIKVRGHTLVWHS--QTPDWVFNLNISGKETL 58

Query: 272 SKAADKRINSVTSRYKGQVIAWDVVNENLHF--------SFFESKLGQNASGVFFNRVHS 323
               +  I +V  RYKG++ AWDVVNE +H         S +   LG++     F     
Sbjct: 59  LARLENHIKTVVGRYKGKIYAWDVVNEAIHDNGSGLRRSSVWYQILGEDYIEKAFRYARE 118

Query: 324 LDGATTLFMNDYNTIEDSRDGKATPAMY--LQKLRQISEFPGNQNLRI-GIGLESHFST- 379
            D    LF NDYNT E         A+Y  ++KL+        + + I GIGL+SH S  
Sbjct: 119 ADPDAKLFYNDYNTEE---PNAKRQAIYELVKKLKA-------KGVPIDGIGLQSHLSLG 168

Query: 380 -PNIPYMRASIDTLGATGLPIWLTEVDVQSSPN-------QAQYLEQILREAHAHPKVQG 431
            PNI  +RA++D   + GL IW+TE+D+   PN       QA   E++ +   AHP V G
Sbjct: 169 GPNIAEIRAALDRFASLGLEIWITELDISGPPNPEENLQAQAADYEEVFKACLAHPAVTG 228

Query: 432 IVVWAAWKP----SGCYRMCLTDNNFKNLATGDVV 462
           + VW          G     L D N++       +
Sbjct: 229 VTVWGVTDGYSWLDGFGAPLLFDANYQPKPAYWAI 263

Length = 263
>gnl|CDD|215862 pfam00331, Glyco_hydro_10, Glycosyl hydrolase family 10 Back     alignment and domain information
>gnl|CDD|226217 COG3693, XynA, Beta-1,4-xylanase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 472
PF00331320 Glyco_hydro_10: Glycosyl hydrolase family 10; Inte 100.0
COG3693345 XynA Beta-1,4-xylanase [Carbohydrate transport and 100.0
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 100.0
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 99.68
PF02018131 CBM_4_9: Carbohydrate binding domain; InterPro: IP 99.49
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 99.47
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 99.37
PF01229 486 Glyco_hydro_39: Glycosyl hydrolases family 39; Int 99.28
TIGR03356427 BGL beta-galactosidase. 99.26
PLN02998497 beta-glucosidase 99.08
PF00232455 Glyco_hydro_1: Glycosyl hydrolase family 1; InterP 99.07
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 99.06
PLN02814504 beta-glucosidase 99.06
PRK09593478 arb 6-phospho-beta-glucosidase; Reviewed 98.98
PLN02849503 beta-glucosidase 98.97
PRK13511469 6-phospho-beta-galactosidase; Provisional 98.96
PRK09852474 cryptic 6-phospho-beta-glucosidase; Provisional 98.94
PRK10150604 beta-D-glucuronidase; Provisional 98.94
PRK15014477 6-phospho-beta-glucosidase BglA; Provisional 98.92
PF11790239 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; 98.9
TIGR01233467 lacG 6-phospho-beta-galactosidase. This enzyme is 98.89
PRK09589476 celA 6-phospho-beta-glucosidase; Reviewed 98.89
PF01301319 Glyco_hydro_35: Glycosyl hydrolases family 35; Int 98.51
COG2723460 BglB Beta-glucosidase/6-phospho-beta-glucosidase/b 98.36
PF02836298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 98.33
PF04862159 DUF642: Protein of unknown function (DUF642); Inte 98.18
PLN03089373 hypothetical protein; Provisional 98.16
PLN03089373 hypothetical protein; Provisional 97.93
PRK10340 1021 ebgA cryptic beta-D-galactosidase subunit alpha; R 97.91
PLN03059 840 beta-galactosidase; Provisional 97.64
PF1287688 Cellulase-like: Sugar-binding cellulase-like; Inte 97.64
KOG0626 524 consensus Beta-glucosidase, lactase phlorizinhydro 97.18
COG1874 673 LacA Beta-galactosidase [Carbohydrate transport an 97.07
PRK09525 1027 lacZ beta-D-galactosidase; Reviewed 96.87
PF14587384 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; P 96.8
COG3664 428 XynB Beta-xylosidase [Carbohydrate transport and m 95.71
PF02055496 Glyco_hydro_30: O-Glycosyl hydrolase family 30; In 95.17
COG3934 587 Endo-beta-mannanase [Carbohydrate transport and me 94.84
COG2730407 BglC Endoglucanase [Carbohydrate transport and met 94.66
COG5520433 O-Glycosyl hydrolase [Cell envelope biogenesis, ou 94.43
PF13204289 DUF4038: Protein of unknown function (DUF4038); PD 94.07
PF15425212 DUF4627: Domain of unknown function (DUF4627); PDB 93.27
KOG0496 649 consensus Beta-galactosidase [Carbohydrate transpo 92.95
PF09092178 Lyase_N: Lyase, N terminal; InterPro: IPR015176 Th 92.9
PLN00197 573 beta-amylase; Provisional 91.64
PLN02161 531 beta-amylase 91.62
PF03422125 CBM_6: Carbohydrate binding module (family 6); Int 91.45
PF03425178 CBM_11: Carbohydrate binding domain (family 11); I 91.35
PLN02803 548 beta-amylase 90.91
PLN02705 681 beta-amylase 89.53
PLN02801 517 beta-amylase 89.38
PLN02905 702 beta-amylase 89.03
TIGR01370315 cysRS possible cysteinyl-tRNA synthetase, Methanoc 88.23
PF00332310 Glyco_hydro_17: Glycosyl hydrolases family 17; Int 85.93
cd06263157 MAM Meprin, A5 protein, and protein tyrosine phosp 85.0
PF01373402 Glyco_hydro_14: Glycosyl hydrolase family 14; Inte 84.62
PF14488166 DUF4434: Domain of unknown function (DUF4434) 84.32
PF04620217 FlaA: Flagellar filament outer layer protein Flaa; 83.81
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 81.73
PF14299154 PP2: Phloem protein 2 81.55
PF00629160 MAM: MAM domain; InterPro: IPR000998 MAM is an acr 81.41
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 80.73
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 Back     alignment and domain information 
Probab=100.00  E-value=2.4e-68  Score=534.11  Aligned_cols=278  Identities=33%  Similarity=0.612  Sum_probs=246.0

Q ss_pred             eecCCcceEEeecCCCCCCH-HHHHHHHccccceeeCCCCCCcccccCCCCCCcchHHHHHHHHHhCCcEEEEeEeecCC
Q 042396          177 QKQLRFPFGCAINKNILTNT-AYQNWFTSRFKVTAFEDEMKWYSTEASPGREDYSASDAMLQFAKNHNIAVRGHNIFWDD  255 (472)
Q Consensus       177 ~~~~~f~fG~av~~~~~~~~-~~~~~~~~~fn~vt~en~~kW~~~ep~~g~~~~~~~D~~v~~a~~~gi~vrGH~lvW~~  255 (472)
                      +.++.|.||+|++...+.+. .|++++.++||.+|+||+|||..+||.+|+|+|+.+|++++||++|||+||||+|+||.
T Consensus         5 ~~~~~f~~G~av~~~~~~~~~~~~~~~~~~Fn~~t~eN~~Kw~~~e~~~g~~~~~~~D~~~~~a~~~g~~vrGH~LvW~~   84 (320)
T PF00331_consen    5 AAKHKFPFGAAVNAQQLEDDPRYRELFAKHFNSVTPENEMKWGSIEPEPGRFNFESADAILDWARENGIKVRGHTLVWHS   84 (320)
T ss_dssp             HHCTTTEEEEEEBGGGHTHHHHHHHHHHHH-SEEEESSTTSHHHHESBTTBEE-HHHHHHHHHHHHTT-EEEEEEEEESS
T ss_pred             HHhccCCEEEEechhHcCCcHHHHHHHHHhCCeeeeccccchhhhcCCCCccCccchhHHHHHHHhcCcceeeeeEEEcc
Confidence            46899999999999987764 89999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCcccCCC---CHH---HHHHHHHHHHHHHhhhcC--CceEEEEeeccCcccc---------ccccccCchHHHHHH
Q 042396          256 PQYQPGWVNSL---SPS---DLSKAADKRINSVTSRYK--GQVIAWDVVNENLHFS---------FFESKLGQNASGVFF  318 (472)
Q Consensus       256 ~~~~P~W~~~~---~~~---~~~~~~~~~i~~v~~ry~--g~i~~WDVvNE~~~~~---------~~~~~~G~~~~~~af  318 (472)
                        ++|+|+...   +++   .++++|++||+++++||+  |+|.+||||||+++.+         .|.+.+|++|+..||
T Consensus        85 --~~P~w~~~~~~~~~~~~~~~~~~l~~~I~~v~~~y~~~g~i~~WDVvNE~i~~~~~~~~~r~~~~~~~lG~~yi~~aF  162 (320)
T PF00331_consen   85 --QTPDWVFNLANGSPDEKEELRARLENHIKTVVTRYKDKGRIYAWDVVNEAIDDDGNPGGLRDSPWYDALGPDYIADAF  162 (320)
T ss_dssp             --SS-HHHHTSTTSSBHHHHHHHHHHHHHHHHHHHHTTTTTTESEEEEEES-B-TTSSSSSBCTSHHHHHHTTCHHHHHH
T ss_pred             --cccceeeeccCCCcccHHHHHHHHHHHHHHHHhHhccccceEEEEEeeecccCCCccccccCChhhhcccHhHHHHHH
Confidence              799999875   544   499999999999999999  7999999999998764         589999999999999


Q ss_pred             HHHHhhCCCCeEEEeccCCcccCCCCCCCHHHHHHHHHHHhcCcCCCCCc-ceeeeccccCC-CCHHHHHHHHHHHHhcC
Q 042396          319 NRVHSLDGATTLFMNDYNTIEDSRDGKATPAMYLQKLRQISEFPGNQNLR-IGIGLESHFST-PNIPYMRASIDTLGATG  396 (472)
Q Consensus       319 ~~Ar~~dP~a~L~~Ndy~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~-DgIG~Q~H~~~-p~~~~~~~~l~~~a~~g  396 (472)
                      ++||+++|+++|||||||++. +    .+...++++|+.|++    +|+| ||||+|+|+.. ..++.+.++|++|+++|
T Consensus       163 ~~A~~~~P~a~L~~NDy~~~~-~----~k~~~~~~lv~~l~~----~gvpIdgIG~Q~H~~~~~~~~~i~~~l~~~~~~G  233 (320)
T PF00331_consen  163 RAAREADPNAKLFYNDYNIES-P----AKRDAYLNLVKDLKA----RGVPIDGIGLQSHFDAGYPPEQIWNALDRFASLG  233 (320)
T ss_dssp             HHHHHHHTTSEEEEEESSTTS-T----HHHHHHHHHHHHHHH----TTHCS-EEEEEEEEETTSSHHHHHHHHHHHHTTT
T ss_pred             HHHHHhCCCcEEEeccccccc-h----HHHHHHHHHHHHHHh----CCCccceechhhccCCCCCHHHHHHHHHHHHHcC
Confidence            999999999999999999743 3    257889999999999    9998 99999999987 33789999999999999


Q ss_pred             CCEEEeeeccCCCc---------hHHHHHHHHHHHHHcCC--CeeEEEEEceecCCCCC-c-----cccccCCCCcchHH
Q 042396          397 LPIWLTEVDVQSSP---------NQAQYLEQILREAHAHP--KVQGIVVWAAWKPSGCY-R-----MCLTDNNFKNLATG  459 (472)
Q Consensus       397 ~pi~iTE~dv~~~~---------~qA~~~~~~~~~~~s~p--~v~gi~~Wg~w~~~~~~-~-----~~L~d~d~~pKPa~  459 (472)
                      +||+||||||....         .||++|++++++|++||  +|+||++||++|...+. .     ++|||.|++|||||
T Consensus       234 l~i~ITElDv~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~~~~v~git~Wg~~D~~sW~~~~~~~~~~lfd~~~~~Kpa~  313 (320)
T PF00331_consen  234 LPIHITELDVRDDDNPPDAEEEEAQAEYYRDFLTACFSHPPAAVEGITWWGFTDGYSWRPDTPPDRPLLFDEDYQPKPAY  313 (320)
T ss_dssp             SEEEEEEEEEESSSTTSCHHHHHHHHHHHHHHHHHHHHTTHCTEEEEEESSSBTTGSTTGGHSEG--SSB-TTSBB-HHH
T ss_pred             CceEEEeeeecCCCCCcchHHHHHHHHHHHHHHHHHHhCCccCCCEEEEECCCCCCcccCCCCCCCCeeECCCcCCCHHH
Confidence            99999999998762         69999999999999999  99999999999987653 2     79999999999999


Q ss_pred             HHHHHH
Q 042396          460 DVVDKL  465 (472)
Q Consensus       460 ~~~~~l  465 (472)
                      +++.+-
T Consensus       314 ~~~~~a  319 (320)
T PF00331_consen  314 DAIVDA  319 (320)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            998763

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
>COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02018 CBM_4_9: Carbohydrate binding domain; InterPro: IPR003305 The 1,4-beta-glucanase CenC from Cellulomonas fimi contains two cellulose-binding domains, CBD(N1) and CBD(N2), arranged in tandem at its N terminus Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR03356 BGL beta-galactosidase Back     alignment and domain information
>PLN02998 beta-glucosidase Back     alignment and domain information
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02814 beta-glucosidase Back     alignment and domain information
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>PLN02849 beta-glucosidase Back     alignment and domain information
>PRK13511 6-phospho-beta-galactosidase; Provisional Back     alignment and domain information
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional Back     alignment and domain information
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins Back     alignment and domain information
>TIGR01233 lacG 6-phospho-beta-galactosidase Back     alignment and domain information
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF04862 DUF642: Protein of unknown function (DUF642); InterPro: IPR006946 This family contains a conserved region found in a number of uncharacterised plant proteins Back     alignment and domain information
>PLN03089 hypothetical protein; Provisional Back     alignment and domain information
>PLN03089 hypothetical protein; Provisional Back     alignment and domain information
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed Back     alignment and domain information
>PLN03059 beta-galactosidase; Provisional Back     alignment and domain information
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09525 lacZ beta-D-galactosidase; Reviewed Back     alignment and domain information
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B Back     alignment and domain information
>COG3664 XynB Beta-xylosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D Back     alignment and domain information
>PF15425 DUF4627: Domain of unknown function (DUF4627); PDB: 3SEE_A Back     alignment and domain information
>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF09092 Lyase_N: Lyase, N terminal; InterPro: IPR015176 This entry represents a domain predominantly found in chondroitin ABC lyase I, adopting a jelly-roll fold topology consisting of a two-layered bent beta-sheet sandwich with one short alpha-helix Back     alignment and domain information
>PLN00197 beta-amylase; Provisional Back     alignment and domain information
>PLN02161 beta-amylase Back     alignment and domain information
>PF03422 CBM_6: Carbohydrate binding module (family 6); InterPro: IPR005084 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity Back     alignment and domain information
>PF03425 CBM_11: Carbohydrate binding domain (family 11); InterPro: IPR005087 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity Back     alignment and domain information
>PLN02803 beta-amylase Back     alignment and domain information
>PLN02705 beta-amylase Back     alignment and domain information
>PLN02801 beta-amylase Back     alignment and domain information
>PLN02905 beta-amylase Back     alignment and domain information
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type Back     alignment and domain information
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06263 MAM Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain Back     alignment and domain information
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>PF04620 FlaA: Flagellar filament outer layer protein Flaa; InterPro: IPR006714 Periplasmic flagella are the organelles of spirochete mobility, and are structurally different from the flagella of other motile bacteria Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PF14299 PP2: Phloem protein 2 Back     alignment and domain information
>PF00629 MAM: MAM domain; InterPro: IPR000998 MAM is an acronym derived from meprin, A-5 protein, and receptor protein-tyrosine phosphatase mu Back     alignment and domain information
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query472
1nq6_A302 Crystal Structure Of The Catalytic Domain Of Xylana 4e-26
1e0v_A313 Xylanase 10a From Sreptomyces Lividans. Cellobiosyl 1e-23
1e0w_A313 Xylanase 10a From Sreptomyces Lividans. Native Stru 1e-23
1xas_A299 Crystal Structure, At 2.6 Angstroms Resolution, Of 4e-23
1ta3_B303 Crystal Structure Of Xylanase (Gh10) In Complex Wit 1e-22
1xyf_A 436 Endo-1,4-Beta-Xylanase From Streptomyces Olivaceovi 4e-22
2g3i_A313 Structure Of S.Olivaceoviridis Xylanase Q88aR275A M 5e-22
2d1z_A 436 Crystal Structure Of Catalytic-Site Mutant Xylanase 8e-21
1v6y_A324 Crystal Structure Of Chimeric Xylanase Between Stre 9e-21
1tux_A301 High Resolution Crystal Structure Of A Thermostable 7e-20
1b30_A302 Xylanase From Penicillium Simplicissimum, Complex W 1e-19
1k6a_A303 Structural Studies On The Mobility In The Active Si 3e-19
1i1w_A303 0.89a Ultra High Resolution Structure Of A Thermost 4e-19
1gok_A303 Thermostable Xylanase I From Thermoascus Aurantiacu 4e-19
2bnj_A303 The Xylanase Ta From Thermoascus Aurantiacus Utiliz 6e-19
1fh7_A312 Crystal Structure Of The Xylanase Cex With Xylobios 9e-18
3cuf_A315 Cellulomonas Fimi XylanaseCELLULASE CEX (CF XYN10A) 1e-17
1xyz_A347 A Common Protein Fold And Similar Active Site In Tw 3e-16
2his_A312 Cellulomonas Fimi XylanaseCELLULASE DOUBLE MUTANT E 4e-16
3o2l_A317 Crystal Structure Of An Inactive Kemp Elimination D 7e-16
2cnc_A386 Family 10 Xylanase Length = 386 8e-16
1uqy_A378 Xylanase Xyn10b Mutant (E262s) From Cellvibrio Mixt 1e-15
1n82_A331 The High-Resolution Crystal Structure Of Ixt6, A Th 8e-15
2q8x_A331 The High-resolution Crystal Structure Of Ixt6, A Th 8e-15
3niy_A341 Crystal Structure Of Native Xylanase 10b From Therm 1e-14
1us3_A530 Native Xylanase10c From Cellvibrio Japonicus Length 2e-14
1vbr_A328 Crystal Structure Of Complex Xylanase 10b From Ther 4e-14
3ms8_A331 Enzyme-Substrate Interactions Of Ixt6, The Intracel 4e-14
3mui_A331 Enzyme-Substrate Interactions Of Ixt6, The Intracel 4e-14
1us2_A530 Xylanase10c (Mutant E385a) From Cellvibrio Japonicu 1e-13
3emc_A331 Crystal Structure Of Xynb, An Intracellular Xylanas 1e-13
3nyd_A316 Crystal Structure Of Kemp Eliminase Hg-2 Complexed 2e-13
1w3h_A359 The 3-Dimensional Structure Of A Thermostable Mutan 5e-13
1w2v_A348 The 3-Dimensional Structure Of A Thermostable Mutan 5e-13
1w32_A348 The 3-Dimensional Structure Of A Thermostable Mutan 8e-13
1w2p_A348 The 3-Dimensional Structure Of A Xylanase (Xyn10a) 8e-13
1clx_A347 Catalytic Core Of Xylanase A Length = 347 9e-13
3u7b_A327 A New Crystal Structure Of A Fusarium Oxysporum Gh1 2e-12
1xys_A347 Catalytic Core Of Xylanase A E246c Mutant Length = 6e-12
1e5n_A348 E246c Mutant Of P Fluorescens Subsp. Cellulosa Xyla 7e-12
3mmd_A379 Crystal Structure Of The W241a Mutant Of Xylanase F 7e-11
1hiz_A379 Xylanase T6 (Xt6) From Bacillus Stearothermophilus 9e-11
2uwf_A356 Crystal Structure Of Family 10 Xylanase From Bacill 2e-10
1r86_A379 Crystal Structure Of The Extracellular Xylanase Fro 2e-09
2fgl_A354 An Alkali Thermostable F10 XYLANASE FROM ALKALOPHIL 2e-08
2f8q_A353 An Alkali Thermostable F10 XYLANASE FROM ALKALOPHIL 2e-08
4f8x_A335 Penicillium Canescens Endo-1,4-Beta-Xylanase Xyle L 3e-08
2dep_A356 Crystal Structure Of Xylanase B From Clostridium St 1e-07
3rdk_A341 Protein Crystal Structure Of Xylanase A1 Of Paeniba 4e-06
>pdb|1NQ6|A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 Length = 302 Back     alignment and structure 
Iteration: 1

 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 25/287 (8%)
Query: 184 FGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDYSASDAMLQFAKNHN 243
           FG A+  N L   AY +   ++F     E+EMKW + E+S     +SA+D ++  A++  
Sbjct: 15  FGAAVAANHLGEAAYASTLDAQFGSVTPENEMKWDAVESSRNSFSFSAADRIVSHAQSKG 74
Query: 244 IAVRGHNIFWDDPQYQPGWVNSLSPSDLSKAADKRINSVTSRYKGQVIAWDVVNENLH-- 301
           + VRGH + W      PGWV+ L+ +DL  A +  I  V + YKG++ +WDVVNE     
Sbjct: 75  MKVRGHTLVWH--SQLPGWVSPLAATDLRSAMNNHITQVMTHYKGKIHSWDVVNEAFQDG 132
Query: 302 ------FSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPAMYLQKL 355
                  S F+ KLG       F    ++D    L  NDYNT  D ++ K+     + K 
Sbjct: 133 GSGARRSSPFQDKLGNGFIEEAFRTARTVDADAKLCYNDYNT--DGQNAKSNAVYEMVKD 190
Query: 356 RQISEFPGNQNLRIGIGLESHF--STPNIPYMRASIDTLGATGLPIWLTEVDVQSSPN-Q 412
            +    P +      +G +SHF  ++P     +A++      G+ + +TE+D++ S + Q
Sbjct: 191 FKQRGVPID-----CVGFQSHFNSNSPVPSDFQANLQRFADLGVDVQITELDIEGSGSAQ 245
Query: 413 AQYLEQILREAHAHPKVQGIVVWA-----AWKPSGCYRMCLTDNNFK 454
           A    +++    A  +  GI VW      +W+  G   +   D N K
Sbjct: 246 AANYTKVVNACLAVTRCTGITVWGVTDKYSWRSGGTPLLFDGDYNKK 292
>pdb|1E0V|A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A Length = 313 Back     alignment and structure
>pdb|1E0W|A Chain A, Xylanase 10a From Sreptomyces Lividans. Native Structure At 1.2 Angstrom Resolution Length = 313 Back     alignment and structure
>pdb|1XAS|A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses Length = 299 Back     alignment and structure
>pdb|1TA3|B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) Length = 303 Back     alignment and structure
>pdb|1XYF|A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis Length = 436 Back     alignment and structure
>pdb|2G3I|A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT Length = 313 Back     alignment and structure
>pdb|2D1Z|A Chain A, Crystal Structure Of Catalytic-Site Mutant Xylanase From Streptomyces Olivaceoviridis E-86 Length = 436 Back     alignment and structure
>pdb|1V6Y|A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex Length = 324 Back     alignment and structure
>pdb|1TUX|A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus Length = 301 Back     alignment and structure
>pdb|1B30|A Chain A, Xylanase From Penicillium Simplicissimum, Complex With 1,2- (4-Deoxy-Beta-L-Threo-Hex-4-Enopyranosyluronic Acid)-Beta- 1,4-Xylotriose) Length = 302 Back     alignment and structure
>pdb|1K6A|A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I Length = 303 Back     alignment and structure
>pdb|1I1W|A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus Length = 303 Back     alignment and structure
>pdb|1GOK|A Chain A, Thermostable Xylanase I From Thermoascus Aurantiacus- Crystal Form Ii Length = 303 Back     alignment and structure
>pdb|2BNJ|A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants Length = 303 Back     alignment and structure
>pdb|1FH7|A Chain A, Crystal Structure Of The Xylanase Cex With Xylobiose- Derived Inhibitor Deoxynojirimycin Length = 312 Back     alignment and structure
>pdb|3CUF|A Chain A, Cellulomonas Fimi XylanaseCELLULASE CEX (CF XYN10A) IN Complex With Cellobiose-Like Isofagomine Length = 315 Back     alignment and structure
>pdb|1XYZ|A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases Length = 347 Back     alignment and structure
>pdb|2HIS|A Chain A, Cellulomonas Fimi XylanaseCELLULASE DOUBLE MUTANT E127aH205N WITH COVALENT CELLOBIOSE Length = 312 Back     alignment and structure
>pdb|3O2L|A Chain A, Crystal Structure Of An Inactive Kemp Elimination Design Hg-1 Length = 317 Back     alignment and structure
>pdb|2CNC|A Chain A, Family 10 Xylanase Length = 386 Back     alignment and structure
>pdb|1UQY|A Chain A, Xylanase Xyn10b Mutant (E262s) From Cellvibrio Mixtus In Complex With Xylopentaose Length = 378 Back     alignment and structure
>pdb|1N82|A Chain A, The High-Resolution Crystal Structure Of Ixt6, A Thermophilic, Intracellular Xylanase From G. Stearothermophilus Length = 331 Back     alignment and structure
>pdb|2Q8X|A Chain A, The High-resolution Crystal Structure Of Ixt6, A Thermophilic, Intracellular Xylanase From G. Stearothermophilus Length = 331 Back     alignment and structure
>pdb|3NIY|A Chain A, Crystal Structure Of Native Xylanase 10b From Thermotoga Petrophila Rku-1 Length = 341 Back     alignment and structure
>pdb|1US3|A Chain A, Native Xylanase10c From Cellvibrio Japonicus Length = 530 Back     alignment and structure
>pdb|1VBR|A Chain A, Crystal Structure Of Complex Xylanase 10b From Thermotoga Maritima With Xylobiose Length = 328 Back     alignment and structure
>pdb|3MS8|A Chain A, Enzyme-Substrate Interactions Of Ixt6, The Intracellular Xylanase Of G. Stearothermophilus. Length = 331 Back     alignment and structure
>pdb|3MUI|A Chain A, Enzyme-Substrate Interactions Of Ixt6, The Intracellular Xylanase Of G. Stearothermophilus. Length = 331 Back     alignment and structure
>pdb|1US2|A Chain A, Xylanase10c (Mutant E385a) From Cellvibrio Japonicus In Complex With Xylopentaose Length = 530 Back     alignment and structure
>pdb|3EMC|A Chain A, Crystal Structure Of Xynb, An Intracellular Xylanase From Paenibacillus Barcinonensis Length = 331 Back     alignment and structure
>pdb|3NYD|A Chain A, Crystal Structure Of Kemp Eliminase Hg-2 Complexed With Transition State Analog 5-Nitro Benzotriazole Length = 316 Back     alignment and structure
>pdb|1W3H|A Chain A, The 3-Dimensional Structure Of A Thermostable Mutant Of A Xylanase (Xyn10a) From Cellvibrio Japonicus Length = 359 Back     alignment and structure
>pdb|1W2V|A Chain A, The 3-Dimensional Structure Of A Thermostable Mutant Of A Xylanase (Xyn10a) From Cellvibrio Japonicus Length = 348 Back     alignment and structure
>pdb|1W32|A Chain A, The 3-Dimensional Structure Of A Thermostable Mutant Of A Xylanase (Xyn10a) From Cellvibrio Japonicus Length = 348 Back     alignment and structure
>pdb|1W2P|A Chain A, The 3-Dimensional Structure Of A Xylanase (Xyn10a) From Cellvibrio Japonicus Length = 348 Back     alignment and structure
>pdb|1CLX|A Chain A, Catalytic Core Of Xylanase A Length = 347 Back     alignment and structure
>pdb|3U7B|A Chain A, A New Crystal Structure Of A Fusarium Oxysporum Gh10 Xylanase Reveals The Presence Of An Extended Loop On Top Of The Catalytic Cleft Length = 327 Back     alignment and structure
>pdb|1XYS|A Chain A, Catalytic Core Of Xylanase A E246c Mutant Length = 347 Back     alignment and structure
>pdb|1E5N|A Chain A, E246c Mutant Of P Fluorescens Subsp. Cellulosa Xylanase A In Complex With Xylopentaose Length = 348 Back     alignment and structure
>pdb|3MMD|A Chain A, Crystal Structure Of The W241a Mutant Of Xylanase From Geobacillus Stearothermophilus T-6 (Xt6) Complexed With Hydrolyzed Xylopentaose Length = 379 Back     alignment and structure
>pdb|1HIZ|A Chain A, Xylanase T6 (Xt6) From Bacillus Stearothermophilus Length = 379 Back     alignment and structure
>pdb|2UWF|A Chain A, Crystal Structure Of Family 10 Xylanase From Bacillus Halodurans Length = 356 Back     alignment and structure
>pdb|1R86|A Chain A, Crystal Structure Of The Extracellular Xylanase From Geobacillus Stearothermophilus T-6 (Xt6, Monoclinic Form): The E159aE265A MUTANT AT 1.8A RESOLUTION Length = 379 Back     alignment and structure
>pdb|2FGL|A Chain A, An Alkali Thermostable F10 XYLANASE FROM ALKALOPHILIC Bacillus Sp. Ng-27 Length = 354 Back     alignment and structure
>pdb|2F8Q|A Chain A, An Alkali Thermostable F10 XYLANASE FROM ALKALOPHILIC Bacillus Sp. Ng-27 Length = 353 Back     alignment and structure
>pdb|4F8X|A Chain A, Penicillium Canescens Endo-1,4-Beta-Xylanase Xyle Length = 335 Back     alignment and structure
>pdb|2DEP|A Chain A, Crystal Structure Of Xylanase B From Clostridium Stercorarium F9 Length = 356 Back     alignment and structure
>pdb|3RDK|A Chain A, Protein Crystal Structure Of Xylanase A1 Of Paenibacillus Sp. Jdr-2 Length = 341 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query472
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 4e-94
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 1e-92
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 8e-90
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 1e-89
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 3e-83
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 3e-82
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 5e-82
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 7e-80
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 3e-70
4f8x_A335 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 4e-70
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 2e-68
3emz_A331 Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba 2e-67
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 3e-67
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 4e-67
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 2e-64
3ro8_A341 Endo-1,4-beta-xylanase; glycosyl hydrolase family 2e-63
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 3e-62
2d1z_A 436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 3e-56
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 4e-52
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 3e-50
1dyo_A160 Endo-1,4-beta-xylanase Y; carbohydrate-binding mod 2e-19
2zez_A144 Family 16 CBM-2, S-layer associated multidomain en 7e-14
2xom_A152 Arabinogalactan endo-1,4-beta-galactosidase; hydro 2e-06
2zex_A147 S-layer associated multidomain endoglucanase; fami 8e-06
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Length = 302 Back     alignment and structure
 Score =  286 bits (733), Expect = 4e-94
 Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 29/302 (9%)

Query: 182 FPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDYSASDAMLQFAKN 241
             FG A+  N L   AY +   ++F     E+EMKW + E+S     +SA+D ++  A++
Sbjct: 13  RYFGAAVAANHLGEAAYASTLDAQFGSVTPENEMKWDAVESSRNSFSFSAADRIVSHAQS 72

Query: 242 HNIAVRGHNIFWDDPQYQPGWVNSLSPSDLSKAADKRINSVTSRYKGQVIAWDVVNENLH 301
             + VRGH + W      PGWV+ L+ +DL  A +  I  V + YKG++ +WDVVNE   
Sbjct: 73  KGMKVRGHTLVWH--SQLPGWVSPLAATDLRSAMNNHITQVMTHYKGKIHSWDVVNEAFQ 130

Query: 302 --------FSFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPAMYLQ 353
                    S F+ KLG       F    ++D    L  NDYNT   +    A   M ++
Sbjct: 131 DGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAKLCYNDYNTDGQNAKSNAVYEM-VK 189

Query: 354 KLRQISEFPGNQNLRI-GIGLESHFS--TPNIPYMRASIDTLGATGLPIWLTEVDVQ-SS 409
             +Q       + + I  +G +SHF+  +P     +A++      G+ + +TE+D++ S 
Sbjct: 190 DFKQ-------RGVPIDCVGFQSHFNSNSPVPSDFQANLQRFADLGVDVQITELDIEGSG 242

Query: 410 PNQAQYLEQILREAHAHPKVQGIVVW-----AAWKPSGCYRMCLTDNNFKNLATGDVVDK 464
             QA    +++    A  +  GI VW      +W+  G     L D ++      D V  
Sbjct: 243 SAQAANYTKVVNACLAVTRCTGITVWGVTDKYSWRSGGT--PLLFDGDYNKKPAYDAVLA 300

Query: 465 LL 466
            L
Sbjct: 301 AL 302
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Length = 303 Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Length = 530 Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Length = 313 Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Length = 303 Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Length = 347 Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Length = 315 Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Length = 540 Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} PDB: 3nj3_A* 1vbr_A* 1vbu_A Length = 341 Back     alignment and structure
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} Length = 335 Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Length = 348 Back     alignment and structure
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} PDB: 3emq_A* 3emc_A* Length = 331 Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Length = 378 Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Length = 331 Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Length = 327 Back     alignment and structure
>3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A Length = 341 Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Length = 379 Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Length = 436 Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Length = 356 Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Length = 356 Back     alignment and structure
>1dyo_A Endo-1,4-beta-xylanase Y; carbohydrate-binding module, xylan-binding; 2.1A {Clostridium thermocellum} SCOP: b.18.1.7 PDB: 1h6y_A 1h6x_A Length = 160 Back     alignment and structure
>2zez_A Family 16 CBM-2, S-layer associated multidomain endoglucanase; family 16 carbohydrate binding module-2; 1.90A {Thermoanaerobacterium polysaccharolytiorganism_taxid} Length = 144 Back     alignment and structure
>2xom_A Arabinogalactan endo-1,4-beta-galactosidase; hydrolase, carbohydrate-binding module, glycoside hydrolase, beta-sandwich.; HET: GAL; 0.95A {Thermotoga maritima} PDB: 2xon_A* Length = 152 Back     alignment and structure
>2zex_A S-layer associated multidomain endoglucanase; family 16 CBM-1 cellopentaose complex, glycosidase, hydrolase; HET: BGC; 1.20A {Thermoanaerobacteriumpolysaccharolyticum} PDB: 2zew_A 2zey_A* 3oea_A* 3oeb_A* Length = 147 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query472
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 100.0
4f8x_A335 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 100.0
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 100.0
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 100.0
3ro8_A341 Endo-1,4-beta-xylanase; glycosyl hydrolase family 100.0
3emz_A331 Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba 100.0
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 100.0
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 100.0
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 100.0
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 100.0
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 100.0
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 100.0
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 100.0
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 100.0
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 100.0
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 100.0
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 100.0
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 100.0
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 100.0
2d1z_A 436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 100.0
1dyo_A160 Endo-1,4-beta-xylanase Y; carbohydrate-binding mod 99.93
1uhv_A 500 Beta-xylosidase; family 39 glycoside hydrolase, xy 99.84
1w91_A 503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 99.83
4ekj_A 500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 99.82
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 99.81
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 99.81
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 99.77
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 99.74
2zez_A144 Family 16 CBM-2, S-layer associated multidomain en 99.72
1vff_A423 Beta-glucosidase; glycosyl hydrolase, membrane-bou 99.72
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 99.69
2zex_A147 S-layer associated multidomain endoglucanase; fami 99.67
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 99.58
1e4i_A447 Beta-glucosidase; hydrolase, family 1 glycosyl hyd 99.58
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 99.57
1qox_A449 Beta-glucosidase; hydrolase, cellulose degradation 99.56
1ug6_A431 Beta-glycosidase; glucosidase, atomic resolution, 99.54
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 99.54
2j78_A468 Beta-glucosidase A; family 1, hydrolase, inhibitor 99.54
3fj0_A465 Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase 99.53
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 99.53
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 99.53
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 99.52
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 99.51
3ahx_A453 Beta-glucosidase A; cellulases, glycosyl hydrolase 99.51
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 99.5
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 99.5
2o9p_A454 Beta-glucosidase B; family 1 glycoside hydrolase; 99.49
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 99.49
3icg_A 515 Endoglucanase D; cellulase, xylanase, carbohydrate 99.48
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 99.47
3apg_A473 Beta-glucosidase; TIM barrel, hydrolase, sugar bin 99.46
4hz8_A444 Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba 99.45
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 99.45
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 99.44
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 99.44
2xhy_A479 BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, 99.44
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 99.43
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 99.41
1qvb_A481 Beta-glycosidase; TIM-barrel, thermostable, hydrol 99.4
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 99.4
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 99.37
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 99.37
1pbg_A468 PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g 99.36
2e3z_A465 Beta-glucosidase; TIM barrel, glycoside hydrolase 99.36
3ta9_A458 Glycoside hydrolase family 1; TIM barrel, glucosid 99.34
1gnx_A479 Beta-glucosidase; hydrolase, glycosyltransferase, 99.33
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 99.33
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 99.32
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 99.32
3ahy_A473 Beta-glucosidase; cellulases, glycosyl hydrolase, 99.28
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 99.28
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 99.27
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 99.27
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 99.25
3qom_A481 6-phospho-beta-glucosidase; structural genomics, P 99.25
4b3l_A479 Beta-glucosidase; hydrolase, glycosidase, carbohyd 99.22
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 99.22
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 99.22
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 99.22
3p6b_A205 Cellulose 1,4-beta-cellobiosidase; beta-sandwich, 99.21
1cx1_A153 Endoglucanase C; cellulose-binding domain, cellool 99.21
2y8k_A 491 Arabinoxylanase, carbohydrate binding family 6; hy 99.21
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 99.2
1v02_A565 Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri 99.19
3gnp_A488 OS03G0212800 protein; beta-alpha barrel, glycosida 99.18
2e9l_A469 Cytosolic beta-glucosidase; novel cytosolic neutra 99.17
1v08_A512 Beta-glucosidase; glycoside hydrolase, dimboa-gluc 99.17
1wcg_A464 Thioglucosidase, myrosinase; aphid, beta-glucosida 99.14
1gu3_A149 Endoglucanase C; carbohydrate-binding module, carb 99.14
2dga_A565 Beta-glucosidase; alpha/beta barrel, hydrolase; 1. 99.14
2jf7_A532 Strictosidine-O-beta-D-glucosidase; alkaloid, hydr 99.14
1wky_A 464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 99.13
1cbg_A490 Cyanogenic beta-glucosidase; hydrolase (O-glycosyl 99.12
1gui_A155 Laminarinase 16A; carbohydrate binding module, CBM 99.11
4dde_A480 6-phospho-beta-glucosidase; structural genomics, P 99.11
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 99.1
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 99.1
3f5l_A481 Beta-glucosidase; beta-alpha-barrels, glycosidase, 99.09
4ha4_A489 Beta-galactosidase; TIM barrel, beta-glycosidase, 99.09
3k4z_A289 Glycoside hydrolase family 9; cellulase, CBHA, CBM 99.09
1uwi_A489 Beta-galactosidase; hydrolase, beta-glycosidase, g 99.08
2xom_A152 Arabinogalactan endo-1,4-beta-galactosidase; hydro 99.07
3vii_A487 Beta-glucosidase; cellulases, glycosyl hydrolase, 99.05
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 99.04
3d3a_A 612 Beta-galactosidase; protein structure initiative I 99.04
1e4m_M501 Myrosinase MA1; hydrolase, family 1 glycosyl hydro 99.04
3thd_A 654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 99.0
3cmg_A667 Putative beta-galactosidase; structural genomics, 98.98
1tg7_A 971 Beta-galactosidase; TIM barrel domain, glycoside h 98.98
3fn9_A 692 Putative beta-galactosidase; structural genomics, 98.97
3ptm_A505 Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly 98.92
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 98.92
4atd_A 513 Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr 98.9
4e8d_A 595 Glycosyl hydrolase, family 35; TIM barrel, beta-pr 98.89
3u7v_A 552 Beta-galactosidase; structural genomics, PSI-biolo 98.79
4a3y_A 540 Raucaffricine-O-beta-D-glucosidase; hydrolase, alk 98.77
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 98.75
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 98.67
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 98.52
3og2_A 1003 Beta-galactosidase; TIM barrel domain, glycoside h 98.52
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 98.47
2w61_A 555 GAS2P, glycolipid-anchored surface protein 2; glyc 98.42
2y24_A383 Xylanase; hydrolase, GH5 family, aldotetraouronic 98.27
1jz7_A 1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 98.21
3gm8_A 801 Glycoside hydrolase family 2, candidate beta-GLYC; 98.19
3oba_A 1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 98.0
3clw_A 507 Conserved exported protein; structural genomics, u 97.94
3kl0_A 401 Glucuronoxylanase XYNC; alpha beta barrel, (beta/a 97.84
2c7f_A 513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 97.79
1qw9_A 502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 97.72
2y2w_A 574 Arabinofuranosidase; hydrolase, arabinoxylan, glyc 97.69
1vem_A 516 Beta-amylase; beta-alpha-barrels, optimum PH, hydr 97.65
2y6h_A167 Xylanase, CBM4-2; hydrolase; 1.08A {Rhodothermus m 97.62
2je8_A 848 Beta-mannosidase; glycoside hydrolase, hydrolase; 97.54
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 97.44
2wnw_A447 Activated by transcription factor SSRB; hydrolase, 97.36
2nt0_A497 Glucosylceramidase; cerezyme, glucocerebrosidase, 97.3
3vny_A 488 Beta-glucuronidase; TIM barrel, greek-KEY, glycosi 97.22
4h41_A340 Putative alpha-L-fucosidase; hydrolase, carbohydra 97.04
3ik2_A517 Endoglucanase A; TIM-like barrel, hydrolase; 2.20A 96.98
2zxq_A 1376 Endo-alpha-N-acetylgalactosaminidase; broken TIM b 96.98
2yih_A 524 CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca 96.98
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 96.93
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 96.91
3ecq_A1531 Protein SPR0328, endo-alpha-N-acetylgalactosaminid 96.89
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 96.87
2vrq_A 496 Alpha-L-arabinofuranosidase; hydrolase, glycosidas 96.54
2vzs_A 1032 CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, 96.51
3zyp_A218 CIP1; metal binding protein, calcium-binding, CBM- 96.49
3zr5_A 656 Galactocerebrosidase; hydrolase, GALC, glycosyl hy 96.4
3ii1_A535 Cellulase; CELM2, glucanase-xyanase, glucanase, xy 96.11
4aw7_A 591 GH86A beta-porphyranase; hydrolase, porphyran-hexa 95.7
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 95.62
2e4t_A 519 Endoglucanase, xyloglucanase; TIM barrel, TIM-like 94.99
3see_A222 Hypothetical sugar binding protein; galactose-bind 94.49
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 94.0
2v3g_A283 Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich 93.98
3ug3_A 504 Alpha-L-arabinofuranosidase; TIM barrel, hydrolase 93.76
3e8v_A82 Possible transglutaminase-family protein; structur 92.17
3gyc_A393 Putative glycoside hydrolase; YP_001304622.1, stru 91.71
3cbw_A353 YDHT protein; structural genomics, unknown functio 90.04
1wdp_A 495 Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 89.89
2xfr_A 535 Beta-amylase; hydrolase, carbohydrate metabolism, 89.81
2q1f_A 1022 Chondroitinase; alpha plus beta, lyase; 2.85A {Bac 88.29
2cdp_A160 Beta-agarase 1; carbohydrate-binding module, hydro 88.26
3kzs_A 463 Glycosyl hydrolase family 5; structural genomics, 87.68
1fa2_A 498 Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 86.85
2w3j_A145 Carbohydrate binding module; sugar-binding protein 86.53
1pmh_X185 Cscbm27-1, beta-1,4-mannanase; jellyroll beta-sand 86.0
2ddx_A333 Beta-1,3-xylanase; glycoside hydrolase, TIM barrel 83.34
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-88  Score=724.70  Aligned_cols=429  Identities=18%  Similarity=0.270  Sum_probs=361.7

Q ss_pred             CCCCCceeeCCCCCCCCCCeeEecce-EEEEecC---CCcee-----------eeeEEE--eeecCCEEEEEEEEEecCC
Q 042396            8 PQYGGGIIKNPELSHGLKGWSAFGNA-KIEQRES---GGNNS-----------CISQKV--YLEKNKFYTLSAWIQVSEG   70 (472)
Q Consensus         8 p~~~~~li~n~~FE~g~~gW~~~g~~-~~~~~~~---~G~~~-----------g~~~~~--~l~~G~~Y~~SawVk~~~g   70 (472)
                      ++.+.+++.|++||+|++||+++|.+ +++++..   +|+++           |+++.+  .|++|++|+||+|||+.++
T Consensus        18 ~~~~~~lv~n~~FE~g~~gW~~~g~~~~~~~~~~~~~~G~~~l~vt~Rt~~w~g~~~~~~~~l~~G~~Y~fSawVk~~g~   97 (540)
T 2w5f_A           18 GSHADYEVVHDTFEVNFDGWCNLGVDTYLTAVENEGNNGTRGMMVINRSSASDGAYSEKGFYLDGGVEYKYSVFVKHNGT   97 (540)
T ss_dssp             ---CCEEEEEECCSSSCTTEEEESTTCEEEEETTSSGGGSCEEEEECCCSTTCEEEEECTTTCCTTCEEEEEEEEECCSS
T ss_pred             CCCCcceEecCCCCCCCCCeeecCCceEEEEecCCCCCCCeEEEEEccCCCCCCceeeccceecCCCEEEEEEEEEeCCC
Confidence            34567899999999999999999964 6766543   55543           776665  7999999999999997543


Q ss_pred             -CccEEEEEEE-C----C-eEEEeeeEEEeCCCeEEEEeeEeeCCC-ccEEEEEEeCCCceeEEEccccccccchhhhhh
Q 042396           71 -AAPVTAVFKT-I----T-GFKHAGAAVAESKCWSMLKGGLSPDAS-GFAELYFESKNTSVDIWVDSISLQPFTQEEWRS  142 (472)
Q Consensus        71 -~~~~~~~~~~-~----~-~~~~~~~~~v~~~~W~~l~g~~t~~~~-~~~~iy~e~~~~~~~~yvDdv~l~~~s~~~w~~  142 (472)
                       +.+++++++. +    + .|..++++++++|+|++|+|+||++.+ +.+.||||+ .++.+||||||+|.+....    
T Consensus        98 ~~~~v~l~l~~~d~~~~~~~~~~i~~~~~~~g~Wt~L~g~ft~p~~~~~~~lyve~-~~~~~f~vDdvsl~~~~~~----  172 (540)
T 2w5f_A           98 GTETFKLSVSYLDSETEEENKEVIATKDVVAGEWTEISAKYKAPKTAVNITLSITT-DSTVDFIFDDVTITRKGMA----  172 (540)
T ss_dssp             SEEEEEEEEEEEETTTCCEEEEEEEEEEEETTCCEEEEEEEECCTTEEEEEEEEEE-SSCCCEEEEEEEEEEC-------
T ss_pred             CCceEEEEEEEecCCCCCceEEEeeEEEEeCCeeEEEEeEEEecCCCeEEEEEEEc-CCCCCEEEEEEEEecCccc----
Confidence             3348888875 2    2 366678888899999999999999976 788999997 5788999999999752110    


Q ss_pred             hhhhhhhccccccEEEEEecCCCCcccCcceeeeeecCCcceEEeecCCCCCCHHHHHHHHccccceeeCCCCCCccccc
Q 042396          143 QQHQSIEKNHKTNVRIQAVDKQGKPLQNANISIEQKQLRFPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEA  222 (472)
Q Consensus       143 ~a~~~Ie~~Rk~~~~~~v~~~~g~p~~~~~v~v~~~~~~f~fG~av~~~~~~~~~~~~~~~~~fn~vt~en~~kW~~~ep  222 (472)
                                          +.+.|++++.....+.++.|+||+|++...+.++.|+++++++||++|+||+|||.++||
T Consensus       173 --------------------~~~~~~~~~~~l~~~~~~~f~~G~av~~~~l~~~~~~~~~~~~Fn~it~eN~mKw~~~e~  232 (540)
T 2w5f_A          173 --------------------EANTVYAANAVLKDMYANYFRVGSVLNSGTVNNSSIKALILREFNSITCENEMKPDATLV  232 (540)
T ss_dssp             --------------------------CCCSSHHHHTTTTCEEEEEECTTGGGCHHHHHHHHHHCSEEEESSTTSHHHHEE
T ss_pred             --------------------ccCCcccccHHHHHHHhhcCCEEEEechhhcCCHHHHHHHHHhCCeeccccccccccccc
Confidence                                134556666555567889999999999999999999999999999999999999999999


Q ss_pred             CCC------CCCcchHHHHHHHHHhCCcEEEEeEeecCCCCCCCcccCCC---------CHHHHHHHHHHHHHHHhhhcC
Q 042396          223 SPG------REDYSASDAMLQFAKNHNIAVRGHNIFWDDPQYQPGWVNSL---------SPSDLSKAADKRINSVTSRYK  287 (472)
Q Consensus       223 ~~g------~~~~~~~D~~v~~a~~~gi~vrGH~lvW~~~~~~P~W~~~~---------~~~~~~~~~~~~i~~v~~ry~  287 (472)
                      ++|      +|+|+.+|++|+||++|||+||||+||||+  |+|+|+...         ++++++++|++||++|++||+
T Consensus       233 ~~g~~~~~~~~~f~~aD~~v~~A~~ngi~vrGHtLvWhs--q~P~W~~~~~~~~~g~~~~~~~l~~~l~~~I~~vv~ry~  310 (540)
T 2w5f_A          233 QSGSTNTNIRVSLNRAASILNFCAQNNIAVRGHTLVWHS--QTPQWFFKDNFQDNGNWVSQSVMDQRLESYIKNMFAEIQ  310 (540)
T ss_dssp             EEEEETTEEEECCTTTHHHHHHHHHTTCEEEEEEEECSS--SCCGGGGBTTSSTTSCBCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCccccceechhHHHHHHHHHHHCCCEEEEEEEEcCC--CCchHHhccCcccccCcCCHHHHHHHHHHHHHHHHHHhc
Confidence            999      499999999999999999999999999998  599999753         578899999999999999999


Q ss_pred             Cc-----eEEEEeeccCcccc--------------------ccccccCc-hHHHHHHHHHHhhCCC-CeEEEeccCCccc
Q 042396          288 GQ-----VIAWDVVNENLHFS--------------------FFESKLGQ-NASGVFFNRVHSLDGA-TTLFMNDYNTIED  340 (472)
Q Consensus       288 g~-----i~~WDVvNE~~~~~--------------------~~~~~~G~-~~~~~af~~Ar~~dP~-a~L~~Ndy~~~~~  340 (472)
                      |+     |++||||||+++.+                    .|.+.+|+ +|++.||++||++||+ |+||+||||+. .
T Consensus       311 g~y~~~~i~~WDVvNE~~~~~~~~~~~~g~~r~~~~~~~~s~w~~~~G~~~~i~~aF~~Ar~~dP~~a~L~~NDyn~~-~  389 (540)
T 2w5f_A          311 RQYPSLNLYAYDVVNAAVSDDANRTRYYGGAREPGYGNGRSPWVQIYGDNKFIEKAFTYARKYAPANCKLYYNDYNEY-W  389 (540)
T ss_dssp             HHCTTSCEEEEEEEESCSCSCHHHHHHSTTCCCBSSBTTBBHHHHHHSSTTHHHHHHHHHHHHSCTTCEEEEEESSTT-S
T ss_pred             ccCCCCcEEEEEEecCcccCCccccccccccccccccccCCHHHHhhCcHHHHHHHHHHHHHhCCccceEEEEecccc-c
Confidence            86     99999999998643                    46677887 8999999999999997 99999999953 2


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCcCCCCCcceeeeccccCC-----CCHHHHHHHHHHHHhcCCCEEEeeeccCCC------
Q 042396          341 SRDGKATPAMYLQKLRQISEFPGNQNLRIGIGLESHFST-----PNIPYMRASIDTLGATGLPIWLTEVDVQSS------  409 (472)
Q Consensus       341 ~~~~~~~~~~~~~~~~~l~~~~~~~G~~DgIG~Q~H~~~-----p~~~~~~~~l~~~a~~g~pi~iTE~dv~~~------  409 (472)
                      +.    +...++++++.|++    +|++||||+|+|+..     |+++.+++.|++|+++|+||+||||||+..      
T Consensus       390 ~~----k~~~~~~lv~~l~~----~gvIdgiG~Q~H~~~~~~~~~~~~~~~~~l~~~a~~Gl~i~iTElDi~~~~~~~~~  461 (540)
T 2w5f_A          390 DH----KRDCIASICANLYN----KGLLDGVGMQSHINADMNGFSGIQNYKAALQKYINIGCDVQITELDISTENGKFSL  461 (540)
T ss_dssp             HH----HHHHHHHHHHHHHH----TTCCCEEEECCEEESCSSSTTCHHHHHHHHHHHHTTTSEEEEEEEEEECTTTTSCH
T ss_pred             cc----HHHHHHHHHHHHHh----CCcccEEEEeeEecCCCCCCCCHHHHHHHHHHHHhcCCcEEEEeeeecCCCCCchH
Confidence            21    35677888899998    999999999999874     478899999999999999999999999875      


Q ss_pred             chHHHHHHHHHHHHHc------CCCeeEEEEEceecCCCCC----ccccccCCCCcchHHHHHHHHHH-HhcCC
Q 042396          410 PNQAQYLEQILREAHA------HPKVQGIVVWAAWKPSGCY----RMCLTDNNFKNLATGDVVDKLLH-EWGSK  472 (472)
Q Consensus       410 ~~qA~~~~~~~~~~~s------~p~v~gi~~Wg~w~~~~~~----~~~L~d~d~~pKPa~~~~~~li~-eW~t~  472 (472)
                      ..||++|++++++|++      +|.|.||++||++|...|.    .++|||.|++|||||.++.++|+ +||+.
T Consensus       462 ~~QA~~y~~~~~~~~~~~~~~~~~~v~git~WG~~D~~sW~~~~~~plLfd~~~~pKpAy~~l~~~l~~~~W~~  535 (540)
T 2w5f_A          462 QQQADKYKAVFQAAVDINRTSSKGKVTAVCVWGPNDANTWLGSQNAPLLFNANNQPKPAYNAVASIIPQSEWGD  535 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCSSCEEEEEESSSSTTSCTTCGGGCCSSBCTTSCBCHHHHHHTTSSCGGGCCC
T ss_pred             HHHHHHHHHHHHHHHhhhccccCCceeEEEEEcCCCCCcccCCCCceeeECCCCCCCHHHHHHHHHhhhcccCC
Confidence            3699999999999984      6889999999999876653    47899999999999999999995 67763
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Back     alignment and structure
>3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A Back     alignment and structure
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>1dyo_A Endo-1,4-beta-xylanase Y; carbohydrate-binding module, xylan-binding; 2.1A {Clostridium thermocellum} SCOP: b.18.1.7 PDB: 1h6y_A 1h6x_A Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>2zez_A Family 16 CBM-2, S-layer associated multidomain endoglucanase; family 16 carbohydrate binding module-2; 1.90A {Thermoanaerobacterium polysaccharolytiorganism_taxid} Back     alignment and structure
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>2zex_A S-layer associated multidomain endoglucanase; family 16 CBM-1 cellopentaose complex, glycosidase, hydrolase; HET: BGC; 1.20A {Thermoanaerobacteriumpolysaccharolyticum} PDB: 2zew_A 2zey_A* 3oea_A* 3oeb_A* Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 Back     alignment and structure
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} Back     alignment and structure
>4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* Back     alignment and structure
>2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* Back     alignment and structure
>3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} Back     alignment and structure
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A Back     alignment and structure
>4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>3p6b_A Cellulose 1,4-beta-cellobiosidase; beta-sandwich, carbohydrate binding, sugar binding protein; 2.00A {Clostridium thermocellum} Back     alignment and structure
>1cx1_A Endoglucanase C; cellulose-binding domain, cellooligosacharides, cellulase, protein- carbohydrate interaction, hydrolase; NMR {Cellulomonas fimi} SCOP: b.18.1.14 Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* Back     alignment and structure
>3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* Back     alignment and structure
>2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* Back     alignment and structure
>1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A Back     alignment and structure
>1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 Back     alignment and structure
>1gu3_A Endoglucanase C; carbohydrate-binding module, carbohydrate binding module, CBM, cellulose; HET: BGC; 2.3A {Cellulomonas fimi} SCOP: b.18.1.14 PDB: 1ulo_A 1ulp_A Back     alignment and structure
>2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* Back     alignment and structure
>2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 Back     alignment and structure
>1gui_A Laminarinase 16A; carbohydrate binding module, CBM, glucan, cellulose; HET: BGC; 1.9A {Thermotoga maritima} SCOP: b.18.1.14 Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* Back     alignment and structure
>4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A Back     alignment and structure
>3k4z_A Glycoside hydrolase family 9; cellulase, CBHA, CBM4, IG-like, cellulosome, CBM, sugar binding protein; HET: CBI XGP; 2.11A {Clostridium thermocellum dsm 4150} Back     alignment and structure
>1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A Back     alignment and structure
>2xom_A Arabinogalactan endo-1,4-beta-galactosidase; hydrolase, carbohydrate-binding module, glycoside hydrolase, beta-sandwich.; HET: GAL; 0.95A {Thermotoga maritima} PDB: 2xon_A* Back     alignment and structure
>3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* Back     alignment and structure
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* Back     alignment and structure
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Back     alignment and structure
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Back     alignment and structure
>4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Back     alignment and structure
>3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} Back     alignment and structure
>3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Back     alignment and structure
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A Back     alignment and structure
>2y6h_A Xylanase, CBM4-2; hydrolase; 1.08A {Rhodothermus marinus} PDB: 2y64_A* 2y6g_A 2y6l_A* 2y6j_A* 2y6k_A* 3jxs_A 1k42_A 1k45_A Back     alignment and structure
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} Back     alignment and structure
>2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... Back     alignment and structure
>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* Back     alignment and structure
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum} Back     alignment and structure
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum} Back     alignment and structure
>2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>3ecq_A Protein SPR0328, endo-alpha-N-acetylgalactosaminidase; distorted (beta/alpha)8 (TIM) barrel glycoside hydrolase DOM WALL; 2.90A {Streptococcus pneumoniae} Back     alignment and structure
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Back     alignment and structure
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Back     alignment and structure
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* Back     alignment and structure
>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina} Back     alignment and structure
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* Back     alignment and structure
>3ii1_A Cellulase; CELM2, glucanase-xyanase, glucanase, xylanase, bifunctional enzyme, hydrolase; HET: BGC; 2.25A {Uncultured bacterium} PDB: 3fw6_A Back     alignment and structure
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A* Back     alignment and structure
>3see_A Hypothetical sugar binding protein; galactose-binding domain-like, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.25A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
>2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A* Back     alignment and structure
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A Back     alignment and structure
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343} Back     alignment and structure
>3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>3cbw_A YDHT protein; structural genomics, unknown function, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; HET: CIT; 1.27A {Bacillus subtilis} PDB: 2whk_A 2qha_A Back     alignment and structure
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* Back     alignment and structure
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* Back     alignment and structure
>2q1f_A Chondroitinase; alpha plus beta, lyase; 2.85A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2cdp_A Beta-agarase 1; carbohydrate-binding module, hydrolase; HET: GAL AAL; 1.59A {Saccharophagus degradans} PDB: 2cdo_A* Back     alignment and structure
>3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 Back     alignment and structure
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium} Back     alignment and structure
>1pmh_X Cscbm27-1, beta-1,4-mannanase; jellyroll beta-sandwich, hydrolase; HET: MAN BMA; 1.06A {Caldicellulosiruptor saccharolyticus} SCOP: b.18.1.18 PDB: 1pmj_X Back     alignment and structure
>2ddx_A Beta-1,3-xylanase; glycoside hydrolase, TIM barrel, hydrola; 0.86A {Vibrio SP} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 472
d1i1wa_303 c.1.8.3 (A:) Xylanase A, catalytic core {Thermoasc 9e-61
d1nq6a_302 c.1.8.3 (A:) Xylanase A, catalytic core {Streptomy 4e-57
d1ta3b_301 c.1.8.3 (B:) Xylanase A, catalytic core {Emericell 5e-55
d1v0la_302 c.1.8.3 (A:) Xylanase A, catalytic core {Streptomy 4e-54
d1fh9a_312 c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomo 2e-51
d1vbua1324 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima 2e-50
d1xyza_320 c.1.8.3 (A:) Xylanase {Clostridium thermocellum, X 3e-50
d1r85a_371 c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus 6e-50
d1w32a_346 c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomon 7e-49
d1ur1a_350 c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 3 5e-46
d1n82a_330 c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus 1e-45
d1us3a2364 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japon 2e-45
d1h6ya_157 b.18.1.7 (A:) Xylan-binding domain {Clostridium th 1e-10
d1gu3a_142 b.18.1.14 (A:) Cellulose-binding domain of cellula 2e-06
d1hjsa_332 c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heter 3e-06
d1cx1a_153 b.18.1.14 (A:) Cellulose-binding domain of cellula 6e-06
d1guia_155 b.18.1.14 (A:) Carbohydrate binding module from la 1e-04
d1foba_334 c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergi 8e-04
d2c0ha1350 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue 0.002
>d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} Length = 303 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Xylanase A, catalytic core
species: Thermoascus aurantiacus [TaxId: 5087]

 Score =  198 bits (505), Expect = 9e-61
 Identities = 71/299 (23%), Positives = 125/299 (41%), Gaps = 21/299 (7%)

Query: 181 RFPFGCAINKNILTNTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDYSASDAMLQFAK 240
           +  FG A ++N LT         + F     E+ MKW +TE S G  +++ +D ++ +A+
Sbjct: 15  KVYFGVATDQNRLTTGKNAAIIQANFGQVTPENSMKWDATEPSQGNFNFAGADYLVNWAQ 74

Query: 241 NHNIAVRGHNIFWDDPQYQPGWVNSLSPSDLSKAA-DKRINSVTSRYKGQVIAWDVVNEN 299
            +   +RGH + W      P WV+S++  +         I ++ +RYKG++ AWDVVNE 
Sbjct: 75  QNGKLIRGHTLVWHS--QLPSWVSSITDKNTLTNVMKNHITTLMTRYKGKIRAWDVVNEA 132

Query: 300 LHF------SFFESKLGQNASGVFFNRVHSLDGATTLFMNDYNTIEDSRDGKATPAMYLQ 353
            +       + F + +G++   + F    + D    L++NDYN    S          ++
Sbjct: 133 FNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLDSASYPKTQAIVNRVK 192

Query: 354 KLRQISEFPGNQNLRIGIGLESHFSTPNIPYMRASIDTLGATGLP-IWLTEVDVQSSPNQ 412
           K R             GIG ++H S      +  ++  L + G P + +TE+DV      
Sbjct: 193 KWRA------AGVPIDGIGSQTHLSAGQGASVLQALPLLASAGTPEVAITELDVAG--AS 244

Query: 413 AQYLEQILREAHAHPKVQGIVVWAAWKPS---GCYRMCLTDNNFKNLATGDVVDKLLHE 468
           +     ++          GI VW    P          L D NF      + + + L +
Sbjct: 245 STDYVNVVNACLNVSSCVGITVWGVADPDSWRASTTPLLFDGNFNPKPAYNAIVQNLQQ 303
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Length = 302 Back     information, alignment and structure
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} Length = 301 Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Length = 302 Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Length = 312 Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Length = 324 Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Length = 320 Back     information, alignment and structure
>d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} Length = 371 Back     information, alignment and structure
>d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} Length = 346 Back     information, alignment and structure
>d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} Length = 350 Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Length = 330 Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Length = 364 Back     information, alignment and structure
>d1h6ya_ b.18.1.7 (A:) Xylan-binding domain {Clostridium thermocellum [TaxId: 1515]} Length = 157 Back     information, alignment and structure
>d1gu3a_ b.18.1.14 (A:) Cellulose-binding domain of cellulase C {Cellulomonas fimi [TaxId: 1708]} Length = 142 Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Length = 332 Back     information, alignment and structure
>d1cx1a_ b.18.1.14 (A:) Cellulose-binding domain of cellulase C {Cellulomonas fimi [TaxId: 1708]} Length = 153 Back     information, alignment and structure
>d1guia_ b.18.1.14 (A:) Carbohydrate binding module from laminarinase 16A {Thermotoga maritima [TaxId: 2336]} Length = 155 Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Length = 334 Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 350 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query472
d1ur1a_350 Xylanase {Cellvibrio mixtus [TaxId: 39650]} 100.0
d1r85a_371 Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 100.0
d1i1wa_303 Xylanase A, catalytic core {Thermoascus aurantiacu 100.0
d1w32a_346 Xylanase A, catalytic core {Pseudomonas fluorescen 100.0
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 100.0
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 100.0
d1ta3b_301 Xylanase A, catalytic core {Emericella nidulans (A 100.0
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 100.0
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 100.0
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 100.0
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 100.0
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 100.0
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 99.88
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 99.87
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 99.78
d1h6ya_157 Xylan-binding domain {Clostridium thermocellum [Ta 99.78
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 99.76
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 99.51
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 99.46
d1cx1a_153 Cellulose-binding domain of cellulase C {Cellulomo 99.44
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 99.44
d2j78a1443 Beta-glucosidase A {Thermotoga maritima [TaxId: 23 99.4
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 99.39
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 99.37
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 99.35
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 99.35
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 99.35
d1qoxa_449 Beta-glucosidase A {Bacillus circulans, subsp. alk 99.33
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 99.32
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 99.31
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 99.31
d1guia_155 Carbohydrate binding module from laminarinase 16A 99.3
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 99.28
d1gnxa_464 Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] 99.26
d1vffa1423 Beta-glucosidase A {Archaeon Pyrococcus horikoshii 99.23
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 99.19
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 99.19
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 99.17
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 99.17
d1pbga_468 6-phospho-beta-D-galactosidase, PGAL {Lactococcus 99.17
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 99.14
d1gu3a_142 Cellulose-binding domain of cellulase C {Cellulomo 99.14
d1qvba_481 beta-Glycosidase {Archaeon Thermosphaera aggregans 99.11
d1uwsa_489 beta-Glycosidase {Archaeon Sulfolobus solfataricus 99.09
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 99.09
d1wcga1462 Thioglucosidase {Cabbage aphid (Brevicoryne brassi 99.06
d1cbga_490 Plant beta-glucosidase (myrosinase) {Creeping whit 99.05
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 99.05
d1v02a_484 Plant beta-glucosidase (myrosinase) {Sorghum bicol 99.01
d1e4mm_499 Plant beta-glucosidase (myrosinase) {White mustard 98.88
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 98.71
d1yq2a5297 beta-Galactosidase, domain 3 {Arthrobacter sp. c2- 98.63
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 98.53
d1nofa2277 Glycosyl hydrolase family 5 xylanase, catalytic do 98.41
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 98.41
d1jz8a5292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 98.36
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 98.2
d2je8a5348 Five-domain beta-mannosidase, domain 3 {Bacteroide 97.9
d1k42a_168 Carbohydrate binding module from a thermostable xy 97.66
d2nt0a2354 Glucosylceramidase, catalytic domain {Human (Homo 96.15
d2v3ga1273 Endoglucanase H N-terminal domain {Clostridium the 95.74
d1vema2 417 Bacterial beta-amylase {Bacillus cereus [TaxId: 13 95.55
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 95.32
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 95.12
d1qw9a2367 Alpha-L-arabinofuranosidase, catalytic domain {Bac 94.92
d1wkya1151 Endo-beta-1,4-mannanase C-terminal domain {Bacillu 94.67
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 94.04
d1pmhx_183 Beta-1,4-mannanase ManA {Caldicellulosiruptor sacc 92.39
d1v0aa1167 Endoglucanase H {Clostridium thermocellum [TaxId: 88.53
d1w9sa_134 Hypothetical protein BH0236 {Bacillus halodurans [ 85.35
d2bvya2366 Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708] 85.33
d1odza_381 Mannanase A, ManA {Pseudomonas cellulosa (Cellvibr 84.14
d1fa2a_ 498 beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI 83.97
d1b1ya_ 500 beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 82.66
d1hn0a2210 Chondroitin ABC lyase I, N-terminal domain {Proteu 81.24
d1wdpa1 490 beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} 80.76
>d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Xylanase
species: Cellvibrio mixtus [TaxId: 39650]

Probab=100.00  E-value=2.4e-69  Score=544.91  Aligned_cols=283  Identities=23%  Similarity=0.381  Sum_probs=255.5

Q ss_pred             eecCCcceEEeecCCCCC--CHHHHHHHHccccceeeCCCCCCcccccCCCCCCcchHHHHHHHHHhCCcEEEEeEeecC
Q 042396          177 QKQLRFPFGCAINKNILT--NTAYQNWFTSRFKVTAFEDEMKWYSTEASPGREDYSASDAMLQFAKNHNIAVRGHNIFWD  254 (472)
Q Consensus       177 ~~~~~f~fG~av~~~~~~--~~~~~~~~~~~fn~vt~en~~kW~~~ep~~g~~~~~~~D~~v~~a~~~gi~vrGH~lvW~  254 (472)
                      ..+++|+||+||+...+.  ++.|++++.++||++|+||+|||..+||++|+|||+.+|++|+||++|||+||||+|+||
T Consensus         5 ~~~~~F~~G~av~~~~~~~~~~~y~~~~~~~Fn~~t~eN~~KW~~ie~~~G~~~~~~~D~~v~~a~~~gi~vrGH~LvW~   84 (350)
T d1ur1a_           5 AYKDNFLIGAALNATIASGADERLNTLIAKEFNSITPENCMKWGVLRDAQGQWNWKDADAFVAFGTKHNLHMVGHTLVWH   84 (350)
T ss_dssp             HTTTTCEEEEEECHHHHTTCCHHHHHHHHHHCSEEEESSTTSHHHHBCTTCCBCCHHHHHHHHHHHHTTCEEEEEEEECS
T ss_pred             HhhCcCceEEEechhhccCCCHHHHHHHHHHcCeecccccCchhhhcCCCCccChHHHHHHHHHHHHCCCEEEEEEEEEc
Confidence            358899999999887553  789999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccCC------CCHHHHHHHHHHHHHHHhhhcCCceEEEEeeccCcc------ccccccccCchHHHHHHHHHH
Q 042396          255 DPQYQPGWVNS------LSPSDLSKAADKRINSVTSRYKGQVIAWDVVNENLH------FSFFESKLGQNASGVFFNRVH  322 (472)
Q Consensus       255 ~~~~~P~W~~~------~~~~~~~~~~~~~i~~v~~ry~g~i~~WDVvNE~~~------~~~~~~~~G~~~~~~af~~Ar  322 (472)
                      +  ++|+|+..      ++++++++.+++||+++++||+|+|.+||||||+++      .+.|.+.+|++|+..||++||
T Consensus        85 ~--~~P~w~~~~~~~~~~~~~~l~~~~~~~I~~v~~ry~g~i~~WDVvNE~~~~~~~~~~~~~~~~~G~~~i~~af~~Ar  162 (350)
T d1ur1a_          85 S--QIHDEVFKNADGSYISKAALQKKMEEHITTLAGRYKGKLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLAN  162 (350)
T ss_dssp             S--SSCGGGTBCTTSCBCCHHHHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHH
T ss_pred             c--cccccccccCCccccCHHHHHHHHHHHHHHHHHhcCCcceEEEEecccccCCCCcccchhhhhcCcHHHHHHHHHHH
Confidence            7  58999843      578999999999999999999999999999999974      456888999999999999999


Q ss_pred             hhCCCCeEEEeccCCcccCCCCCCCHHHHHHHHHHHhcCcCCCCCc-ceeeeccccCC--CCHHHHHHHHHHHHhcCCCE
Q 042396          323 SLDGATTLFMNDYNTIEDSRDGKATPAMYLQKLRQISEFPGNQNLR-IGIGLESHFST--PNIPYMRASIDTLGATGLPI  399 (472)
Q Consensus       323 ~~dP~a~L~~Ndy~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~-DgIG~Q~H~~~--p~~~~~~~~l~~~a~~g~pi  399 (472)
                      ++||+++|||||||+ +.++    +...|+++++.|++    +|+| ||||+|+|+..  ++++.+++.|++|+++|+||
T Consensus       163 ~~dP~akL~~Ndyn~-~~~~----k~~~~~~lv~~l~~----~GvpiDgIGlQ~H~~~~~~~~~~i~~~l~~~~~lg~~i  233 (350)
T d1ur1a_         163 EVDPKAHLMYNDYNI-ERTG----KREATVEMIERLQK----RGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAKLGLRV  233 (350)
T ss_dssp             HHCTTSEEEEEESST-TSTT----HHHHHHHHHHHHHH----TTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTTCEE
T ss_pred             hhCCCceEeeccccc-cccc----ccHHHHHHHHHHHh----CCCCceEEEEeeeccCCCCCHHHHHHHHHHHHhcCCce
Confidence            999999999999997 4333    46789999999999    9999 99999999875  78889999999999999999


Q ss_pred             EEeeeccCCC---------------------------------chHHHHHHHHHHHHHcCC-CeeEEEEEceecCCC---
Q 042396          400 WLTEVDVQSS---------------------------------PNQAQYLEQILREAHAHP-KVQGIVVWAAWKPSG---  442 (472)
Q Consensus       400 ~iTE~dv~~~---------------------------------~~qA~~~~~~~~~~~s~p-~v~gi~~Wg~w~~~~---  442 (472)
                      +||||||...                                 ..||+.|++++++|++|| +|+||++||++|...   
T Consensus       234 ~iTElDv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~qA~~y~~~~~~~~~~~~~v~~it~Wg~~D~~sW~~  313 (350)
T d1ur1a_         234 HFTSLDVDVLPSVWELPVAEVSTRFEYKPERDPYTKGLPQEMQDKLAKRYEDLFKLFIKHSDKIDRATFWGVSDDASWLN  313 (350)
T ss_dssp             EEEEEEEECSCCCCC----CTTTTTSCCGGGCTTTTCCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESCSBGGGCGGG
T ss_pred             eecccceeccccccccccccccchhhcccccCccccCCcHHHHHHHHHHHHHHHHHHHhcCCCeeEEEEECCccCccccc
Confidence            9999998531                                 148999999999999998 699999999987532   


Q ss_pred             -------CCccccccCCCCcchHHHHHHHHHHHhc
Q 042396          443 -------CYRMCLTDNNFKNLATGDVVDKLLHEWG  470 (472)
Q Consensus       443 -------~~~~~L~d~d~~pKPa~~~~~~li~eW~  470 (472)
                             ...++|||.|++|||||.++.+|+|+++
T Consensus       314 ~~~~~~~~~~plL~d~d~~pKpAy~~~~dl~~~~~  348 (350)
T d1ur1a_         314 GFPIPGRTNYPLLFDRKLQPKDAYFRLLDLKRLEH  348 (350)
T ss_dssp             TSSSTTCCCCCSSBCTTSCBCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHhchhhchh
Confidence                   2247899999999999999999999544
>d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} Back     information, alignment and structure
>d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1h6ya_ b.18.1.7 (A:) Xylan-binding domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure
>d1cx1a_ b.18.1.14 (A:) Cellulose-binding domain of cellulase C {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1guia_ b.18.1.14 (A:) Carbohydrate binding module from laminarinase 16A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1gu3a_ b.18.1.14 (A:) Cellulose-binding domain of cellulase C {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} Back     information, alignment and structure
>d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} Back     information, alignment and structure
>d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} Back     information, alignment and structure
>d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1k42a_ b.18.1.14 (A:) Carbohydrate binding module from a thermostable xylanase {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure
>d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wkya1 b.18.1.31 (A:340-490) Endo-beta-1,4-mannanase C-terminal domain {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
>d1pmhx_ b.18.1.18 (X:) Beta-1,4-mannanase ManA {Caldicellulosiruptor saccharolyticus [TaxId: 44001]} Back     information, alignment and structure
>d1v0aa1 b.18.1.30 (A:4-170) Endoglucanase H {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1w9sa_ b.18.1.10 (A:) Hypothetical protein BH0236 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d2bvya2 c.1.8.3 (A:5-370) Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1odza_ c.1.8.3 (A:) Mannanase A, ManA {Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]} Back     information, alignment and structure
>d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Back     information, alignment and structure
>d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1hn0a2 b.18.1.17 (A:25-234) Chondroitin ABC lyase I, N-terminal domain {Proteus vulgaris [TaxId: 585]} Back     information, alignment and structure
>d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure