Citrus Sinensis ID: 042426

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Protein Sequence
MQPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE
Secondary Structure (PSIPRED)
ccccccccEEEEEEccccccccccEEEEccccEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHcccEEEcccccccHHHHHHHHccccccEEEcccccHHHHHHHHHHHcccEEEEEccccccccccccccccHHHHHHHcEEEEEEEEccccccHHHHHHHHHHHHHcccEEEEEEHHHHcccHHHHHHHccccccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccEEEccEEEEEEEccccccccccEEEEccccEEEEEEcccccEEEcccccccHHHHHHHcccccHHHHHEHHHccccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccHHEcccccccHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHccccEEEEHHHEccccccccccHHHHHHHHHHHHEcEEEEccHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHcHHHHHHHHccccccEEEEEEccc
Coil and Loop (DISEMBL)
mqplsgygvskvldsthpnykkddlvwgltsweefsliqsPQLLIKILdtsvplpyytgilgmpgltaygglhelcspkkgeyVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKhkfgfddafnykeepdldaalnrcfpegidiYFENVGGKMLDAVLLNMRICGHIAVCgmisqyniekpegvHNLMQVVGKRICmegflagdfyhqYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE
Flexible Loop (DISEMBL)
mqplsgygvSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE
Low Complexity Region (SEG)
MQPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE
Disordered region (IsUnstruct)
****************HPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA****
Disordered Region (DISOPRED)
MQPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA**
Disordered Region (DISEMBL)
MQPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE
Disordered Region (DISPRO)
MQPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	270	2.2.26 [Sep-21-2011]
Q39173	343	NADP-dependent alkenal do	yes	no	0.996	0.784	0.711	1e-111
Q39172	345	NADP-dependent alkenal do	no	no	0.996	0.779	0.696	1e-109
Q6WAU0	342	(+)-pulegone reductase OS	N/A	no	0.977	0.771	0.694	1e-108
Q9C0Y6	349	Zinc-type alcohol dehydro	yes	no	0.988	0.765	0.432	9e-52
O34812	339	Putative NADP-dependent o	yes	no	0.974	0.775	0.430	3e-51
P76113	345	NADPH-dependent curcumin	N/A	no	0.974	0.762	0.409	1e-47
Q91YR9	329	Prostaglandin reductase 1	yes	no	0.962	0.790	0.430	2e-46
Q29073	329	Prostaglandin reductase 1	yes	no	0.966	0.793	0.413	8e-46
P97584	329	Prostaglandin reductase 1	yes	no	0.966	0.793	0.424	2e-45
Q3SZJ4	329	Prostaglandin reductase 1	yes	no	0.962	0.790	0.400	2e-43

>sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2

 Score =  401 bits (1030), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/270 (71%), Positives = 226/270 (83%), Gaps = 1/270 (0%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQS-PQLLIKILDTSVPLPYYTGI 60
           +P+ GYGVS+V++S HP+YKK DL+WG+  WEE+S+I     +  KI  T VPL YYTG+
Sbjct: 74  KPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKIQHTDVPLSYYTGL 133

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           LGMPG+TAY G +E+CSPKKGE VYVSAASGAVGQLVGQF K++GCYVVGSA SKEKVDL
Sbjct: 134 LGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDL 193

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           LK KFGFDDAFNYKEE DL AAL RCFP+GID+YFENVGGKMLDAVLLNM   G IAVCG
Sbjct: 194 LKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCG 253

Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
           MISQYN+E  EGVHNL  ++ KRI ++GF+  DFY +YPKFLELV+  IKEGK+ YVED+
Sbjct: 254 MISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEGKITYVEDV 313

Query: 241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           A+GLEKAP ALVG+F G+NVGKQ+V +ARE
Sbjct: 314 ADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 4

>sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1

 Score =  395 bits (1015), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 188/270 (69%), Positives = 223/270 (82%), Gaps = 1/270 (0%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQS-PQLLIKILDTSVPLPYYTGI 60
           QP+ GYGVS++++S HP+YKK DL+WG+ +WEE+S+I        KI  T VPL YYTG+
Sbjct: 76  QPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGL 135

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           LGMPG+TAY G +E+CSPK+GE VYVSAASGAVGQLVGQ  K++GCYVVGSA SKEKVDL
Sbjct: 136 LGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL 195

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           LK KFGFDDAFNYKEE DL AAL RCFP GIDIYFENVGGKMLDAVL+NM + G IAVCG
Sbjct: 196 LKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCG 255

Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
           MISQYN+E  EGVHNL  ++ KRI ++GF+  DFY +Y KFLE V+  I+EGK+ YVED+
Sbjct: 256 MISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDV 315

Query: 241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           A+GLEKAP ALVG+F G+NVGKQ+V VARE
Sbjct: 316 ADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1

 Score =  391 bits (1005), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 184/265 (69%), Positives = 227/265 (85%), Gaps = 1/265 (0%)

Query: 7   YGVSKVLDSTHPNYKKDDLVWGLTS-WEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPG 65
           YGVSKVLDSTHP+Y+K +L+WG  + WEE++LIQ+P  L KI D  VPL YY GILGMPG
Sbjct: 78  YGVSKVLDSTHPSYEKGELIWGSQAGWEEYTLIQNPYNLFKIQDKDVPLSYYVGILGMPG 137

Query: 66  LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
           +TAY G  E+CSPKKGE V+V+AA+G+VGQLVGQF K+ GCYVVGSA SKEKVDLLK+KF
Sbjct: 138 MTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYVVGSAGSKEKVDLLKNKF 197

Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQY 185
           GFDDAFNYKEE D D AL R FPEGIDIYF+NVGGKML+AV+ NMR+ G IAVCGM+SQY
Sbjct: 198 GFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVINNMRVHGRIAVCGMVSQY 257

Query: 186 NIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLE 245
           ++++PEGVHNL++++ K+I M+GF+  D+YH YPKFLE+V+  IKEGK+ YVEDI+EGLE
Sbjct: 258 SLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLEMVLPRIKEGKVTYVEDISEGLE 317

Query: 246 KAPSALVGIFTGQNVGKQLVAVARE 270
            APSAL+G++ G+NVG Q+VAV+RE
Sbjct: 318 SAPSALLGVYVGRNVGNQVVAVSRE 342

Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 1

>sp|Q9C0Y6|YKM8_SCHPO Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.08c PE=3 SV=1

 Score =  203 bits (517), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 118/273 (43%), Positives = 161/273 (58%), Gaps = 6/273 (2%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQL-LIKILDTSVPLPY--YT 58
           +P     V+KV+ ST   YK    V  ++ WEE++ +    L  ++ ++    LP   + 
Sbjct: 79  KPFYNSTVAKVVKSTLDQYKPGMDVVFVSGWEEYTFVSKQALGFLQPINNPYKLPLIDFV 138

Query: 59  GILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV 118
           G LGMP  TAY GL  +  PK GE +Y+SAASGAVGQ+ GQ  K +G +VVGS  S EK 
Sbjct: 139 GSLGMPSQTAYCGLKHIGKPKAGETIYISAASGAVGQMAGQLAKAMGLHVVGSVGSDEKF 198

Query: 119 DLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAV 178
            +     G+D  FNYK+E    A L R  P+GIDIYFENVGG+ +DAVL NM + G I  
Sbjct: 199 KICLDS-GYDSVFNYKKESPFKA-LPRLCPKGIDIYFENVGGETMDAVLENMNLQGRIIF 256

Query: 179 CGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQY-PKFLELVMLAIKEGKLVYV 237
           CG ISQYN   P  V NL  V+ K + ++GF+  +   QY  ++ E +   I EGK+ Y 
Sbjct: 257 CGAISQYNNPNPYRVKNLGMVLVKSLTIQGFIVANILPQYQEQYFEEMPKLIAEGKIKYK 316

Query: 238 EDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
            D+ +GLE AP A +G+  G+N GK +V +A E
Sbjct: 317 CDVYDGLESAPEAFIGMLQGKNSGKTIVKIADE 349

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1

 Score =  202 bits (513), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/272 (43%), Positives = 162/272 (59%), Gaps = 9/272 (3%)

Query: 2   QPLSGYGVSKVL-DSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSV-PLPYYTG 59
           + LSG  +++V+ D  H   KK D+V G  SW+EFS +    L  + +DTS+ P   Y G
Sbjct: 69  KALSGGVIAEVVSDGNH--LKKGDIVIGNLSWQEFSAVSESAL--RKIDTSLAPASAYLG 124

Query: 60  ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
           ILGM GLTAY GL ++  PK+GE V VS A+GAVG  VGQ  K+ G  VVG A S EK+D
Sbjct: 125 ILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAGSDEKID 184

Query: 120 LLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVC 179
            LK +  FD+A NYK   D+  AL    P+G+D+YF+NVGG + DAV+  +     I VC
Sbjct: 185 YLKQELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPISDAVMNLLNEFARIPVC 244

Query: 180 GMISQYNIEKPE---GVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY 236
           G IS YN E      G     +++  +  M+GF+  D+  ++ +  + +   +K GKL Y
Sbjct: 245 GAISSYNAESEADDMGPRVQSKLIKTKSLMQGFIVSDYSDRFSEGAKQLAEWLKAGKLHY 304

Query: 237 VEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA 268
            E I EG E  P A +G+F G+N GKQL+ V+
Sbjct: 305 EETITEGFENIPDAFLGLFKGENKGKQLIKVS 336

Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P76113|CURA_ECOLI NADPH-dependent curcumin reductase OS=Escherichia coli (strain K12) GN=curA PE=1 SV=3

 Score =  189 bits (481), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/271 (40%), Positives = 158/271 (58%), Gaps = 8/271 (2%)

Query: 4   LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGM 63
           + G  VS+V++S HP+Y+  D V G + W+++  I S   L+K+ D      +  G+LGM
Sbjct: 74  MVGGTVSRVVESNHPDYQSGDWVLGYSGWQDYD-ISSGDDLVKLGDHPQNPSWSLGVLGM 132

Query: 64  PGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH 123
           PG TAY GL ++  PK+GE + V+AA+G VG  VGQ  KL GC VVG A   EK      
Sbjct: 133 PGFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKGCRVVGVAGGAEKCRHATE 192

Query: 124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
             GFD   ++  + D    L +  P+GIDIY+ENVGGK+ DAVL  +     I VCG++S
Sbjct: 193 VLGFDVCLDHHAD-DFAEQLAKACPKGIDIYYENVGGKVFDAVLPLLNTSARIPVCGLVS 251

Query: 184 QYN-IEKPEGVHNL----MQVVGKRICMEGF-LAGDFYHQYPKFLELVMLAIKEGKLVYV 237
            YN  E P G   L      V+ KRI ++GF +A D+ H+  +F   +   +KE K+ Y 
Sbjct: 252 SYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQDYGHRIHEFQREMGQWVKEDKIHYR 311

Query: 238 EDIAEGLEKAPSALVGIFTGQNVGKQLVAVA 268
           E+I +GLE AP   +G+  G+N GK ++ VA
Sbjct: 312 EEITDGLENAPQTFIGLLKGKNFGKVVIRVA 342

Catalyzes the metal-independent reduction of curcumin to dihydrocurcumin (DHC) as an intermediate product, followed by further reduction to tetrahydrocurcumin (THC) as an end product. It also acts on 3-octene-2-one, 3-hepten-2-one, resveratrol, and trans-2-octenal.

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 3

>sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2

 Score =  186 bits (472), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/267 (43%), Positives = 159/267 (59%), Gaps = 7/267 (2%)

Query: 4   LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQS---PQLLIKILDTSVPLPYYTGI 60
           + G  V++V++S +  + K  +V  L  W   S+       +L ++  D  +PL    G 
Sbjct: 63  MMGEQVARVVESKNSAFPKGTIVAALLGWTSHSISDGNGLTKLPVEWPD-KLPLSLALGT 121

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           +GMPGLTAY GL ++C  K GE V VSAA+GAVG +VGQ  KL GC VVG+A S EKV  
Sbjct: 122 VGMPGLTAYFGLLDICGVKGGETVMVSAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAY 181

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           LK K GFD AFNYK    L+ AL    P+G D YF+NVGG+  +AV+L M+  G IA+CG
Sbjct: 182 LK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNAVILQMKTFGRIAICG 240

Query: 181 MISQYNIEKPEGVHNLMQVV-GKRICMEGFLAGDFYHQ-YPKFLELVMLAIKEGKLVYVE 238
            ISQYN   P       +VV  +++ MEGF+   +  +   K L  +M  + EGK+   E
Sbjct: 241 AISQYNRTGPCPQGPAPEVVIYQQLRMEGFIVNRWQGEVRQKALTELMNWVSEGKVQCHE 300

Query: 239 DIAEGLEKAPSALVGIFTGQNVGKQLV 265
            + EG EK P+A +G+  G+N+GK +V
Sbjct: 301 YVTEGFEKMPAAFMGMLKGENLGKTIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q29073|PTGR1_PIG Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1

 Score =  184 bits (466), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 110/266 (41%), Positives = 153/266 (57%), Gaps = 5/266 (1%)

Query: 4   LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQL--LIKILDTSVPLPYYTGIL 61
           + G  V++V++S +  +    +V  L  W   S+     L  L+     ++PL    G +
Sbjct: 63  MMGEQVARVIESKNAAFPTGTIVVALLGWTTHSISDGKNLERLLAEWPDTLPLSLTLGTV 122

Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
           GMPGLTAY GL ++C  K GE V V+AA+GAVG +VGQ  KL GC VVG+A S EKV  L
Sbjct: 123 GMPGLTAYFGLLDICGLKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVACL 182

Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
           K K+GFD AFNYK    L+  L +  PEG D YF+NVGG+  +AV   M+  G IA+CG 
Sbjct: 183 K-KYGFDVAFNYKTIESLEETLKKASPEGYDCYFDNVGGEFSNAVTSQMKKFGRIAICGA 241

Query: 182 ISQYNIEKPEGVHNLMQVV-GKRICMEGFLAGDFYHQ-YPKFLELVMLAIKEGKLVYVED 239
           IS YN   P       +VV    +C +GF+   +  +   K L  ++  + EGK+ Y E 
Sbjct: 242 ISTYNRTGPPPPGPPPEVVIYNELCFQGFIVTRWQGEVRQKALRDLLKWVSEGKIQYHEH 301

Query: 240 IAEGLEKAPSALVGIFTGQNVGKQLV 265
           I EG E  P+A +G+  G+N+GK +V
Sbjct: 302 ITEGFENMPAAFMGMLKGENLGKAIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3

 Score =  182 bits (463), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/266 (42%), Positives = 154/266 (57%), Gaps = 5/266 (1%)

Query: 4   LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQL--LIKILDTSVPLPYYTGIL 61
           + G  V++V++S +  +    +V  L  W   S+     L  L       +PL    G +
Sbjct: 63  MMGEQVARVVESKNSAFPTGTIVVALLGWTSHSISDGNGLRKLPAEWPDKLPLSLALGTV 122

Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
           GMPGLTAY GL ++C  K GE V V+AA+GAVG +VGQ  KL GC VVG+A S EKV  L
Sbjct: 123 GMPGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYL 182

Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
           K K GFD AFNYK    L+ AL    P+G D YF+NVGG+  + V+L M+  G IA+CG 
Sbjct: 183 K-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNTVILQMKTFGRIAICGA 241

Query: 182 ISQYNIEKPEGVHNLMQV-VGKRICMEGFLAGDFYHQ-YPKFLELVMLAIKEGKLVYVED 239
           ISQYN   P       +V + +++ MEGF+   +  +   K L  +M  + EGK+ Y E 
Sbjct: 242 ISQYNRTGPCPPGPSPEVIIYQQLRMEGFIVTRWQGEVRQKALTDLMNWVSEGKIRYHEY 301

Query: 240 IAEGLEKAPSALVGIFTGQNVGKQLV 265
           I EG EK P+A +G+  G N+GK +V
Sbjct: 302 ITEGFEKMPAAFMGMLKGDNLGKTIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q3SZJ4|PTGR1_BOVIN Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1

 Score =  175 bits (444), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/267 (40%), Positives = 153/267 (57%), Gaps = 7/267 (2%)

Query: 4   LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQL---LIKILDTSVPLPYYTGI 60
           + G  V++V++S +  +    +V   + W   S+    +L   L +  DT +PL    G 
Sbjct: 63  MMGEQVARVVESKNSAFPTGTIVLAPSGWTTHSISNGEKLEKVLAEWPDT-LPLSLALGT 121

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           +GMPGLTAY GL ++C  K GE V VSAA+GAVG +VGQ  KL GC VVG+A S EKV  
Sbjct: 122 VGMPGLTAYFGLLDICGVKGGETVLVSAAAGAVGSIVGQIAKLKGCKVVGTAGSDEKVAW 181

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           LK K GFD A NYK    L+ AL    PEG D YF+NVGG+  +  +  M+  G IA+CG
Sbjct: 182 LK-KHGFDVALNYKTVKSLEEALKEAAPEGYDCYFDNVGGEFSNVAITQMKKFGRIAICG 240

Query: 181 MISQYNIEKPEGVHNLMQ-VVGKRICMEGFLAGDFYHQ-YPKFLELVMLAIKEGKLVYVE 238
            IS YN   P       + ++ K + ++GF+   +  +   K L  ++  + EGK+ Y E
Sbjct: 241 AISVYNRTSPLSPGPSPEIIIFKELHLQGFVVYRWQGEVRQKALRDLLKWVSEGKIQYHE 300

Query: 239 DIAEGLEKAPSALVGIFTGQNVGKQLV 265
            + EG E  P+A +G+  G+N+GK +V
Sbjct: 301 HVTEGFENMPAAFIGLLKGENLGKAIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	270
255577891	345	alcohol dehydrogenase, putative [Ricinus	0.996	0.779	0.784	1e-121
224092856	345	predicted protein [Populus trichocarpa]	0.996	0.779	0.743	1e-116
224117858	348	predicted protein [Populus trichocarpa]	0.996	0.772	0.728	1e-114
225434189	345	PREDICTED: NADP-dependent alkenal double	0.996	0.779	0.728	1e-114
224117874	348	predicted protein [Populus trichocarpa]	0.996	0.772	0.724	1e-114
225434197	345	PREDICTED: NADP-dependent alkenal double	0.988	0.773	0.726	1e-112
224092848	348	predicted protein [Populus trichocarpa]	0.996	0.772	0.736	1e-112
147792340	364	hypothetical protein VITISV_043826 [Viti	0.988	0.733	0.726	1e-111
225434191	342	PREDICTED: NADP-dependent alkenal double	0.988	0.780	0.726	1e-111
444302246	351	Chain A, X-ray Crystal Structure Of A Do	0.996	0.766	0.713	1e-111

>gi|255577891|ref|XP_002529818.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530695|gb|EEF32567.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/269 (78%), Positives = 236/269 (87%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGIL 61
           +PL GYGV KVL+STHPNYKK DL WG T WEE+S+I SP+LLIKI  T +PL YYTGIL
Sbjct: 77  KPLGGYGVVKVLESTHPNYKKGDLAWGFTGWEEYSVIVSPKLLIKIEHTDLPLSYYTGIL 136

Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
           GM G+TAY G  E+CSPKKGE+VYVSAASGAVGQLVGQF K+ GCYVVGSA SKEKVD+L
Sbjct: 137 GMHGVTAYAGFFEVCSPKKGEFVYVSAASGAVGQLVGQFAKVSGCYVVGSAGSKEKVDML 196

Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
           K+KFGFDDAFNYKEEPDLDAAL R FPEGIDIYFENVGG+MLDAVLLNMRI G IAVCGM
Sbjct: 197 KNKFGFDDAFNYKEEPDLDAALKRYFPEGIDIYFENVGGEMLDAVLLNMRIRGRIAVCGM 256

Query: 182 ISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIA 241
           ISQYN++KPEGVHNL  ++GKRI MEGFLAGDFYH YP  L++V+  IKEGK+VYVED+A
Sbjct: 257 ISQYNLDKPEGVHNLSAIIGKRIRMEGFLAGDFYHLYPNLLDMVIPYIKEGKIVYVEDVA 316

Query: 242 EGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           EGLE AP+AL+GIF G+NVGKQLV VARE
Sbjct: 317 EGLENAPTALIGIFRGRNVGKQLVVVARE 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092856|ref|XP_002309725.1| predicted protein [Populus trichocarpa] gi|222852628|gb|EEE90175.1| predicted protein [Populus trichocarpa]

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/269 (74%), Positives = 230/269 (85%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGIL 61
           +PL+GYGV+K+LDSTHPNYKK DL WG T WEE+SLI SP++LIKI    VPL YYTGIL
Sbjct: 77  KPLTGYGVAKILDSTHPNYKKGDLAWGFTGWEEYSLIVSPRILIKIEHADVPLSYYTGIL 136

Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
           GMPG+TAY G +E+C+PKKGEYVY+SAASGAVGQ+VGQF KL GCYVVGSA SKEKVDLL
Sbjct: 137 GMPGMTAYAGFYEICTPKKGEYVYISAASGAVGQIVGQFAKLSGCYVVGSAGSKEKVDLL 196

Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
           K+KFGFD+AFNYKEEPDL AAL R FPEGIDIYFENVGGKMLDAVL NMR  G IA CGM
Sbjct: 197 KNKFGFDEAFNYKEEPDLTAALKRYFPEGIDIYFENVGGKMLDAVLANMRTLGRIAACGM 256

Query: 182 ISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIA 241
           ISQYN+EK EGVHNL  +V K+I M+GFLA  +YH YPKFLE+ +  IK+GK+VYVED A
Sbjct: 257 ISQYNLEKHEGVHNLTLIVWKQIRMQGFLAASYYHLYPKFLEMALPYIKQGKIVYVEDKA 316

Query: 242 EGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           EGLE  P++L+ +FTGQNVGK+L+ VARE
Sbjct: 317 EGLESGPTSLLSLFTGQNVGKKLLVVARE 345

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117858|ref|XP_002331649.1| predicted protein [Populus trichocarpa] gi|222874045|gb|EEF11176.1| predicted protein [Populus trichocarpa]

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/269 (72%), Positives = 234/269 (86%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGIL 61
            P+SG GV+KVLDS HP+YKK D +WG+T WEE+SLI + + L KI D  VPL YYTGIL
Sbjct: 80  SPISGRGVAKVLDSRHPDYKKGDFIWGMTGWEEYSLITATETLFKIHDKDVPLSYYTGIL 139

Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
           GMPGLTAY G +E+CSPKKGE+V++SAASGAVGQLVGQF KL+GCYVVGSA SK+KVDLL
Sbjct: 140 GMPGLTAYAGFYEICSPKKGEFVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 199

Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
           K+KFGFDDAFNYKEE DLDAAL R FP+GIDIYFENVGGKMLDAV+LNMR+ G I+VCGM
Sbjct: 200 KNKFGFDDAFNYKEELDLDAALKRYFPDGIDIYFENVGGKMLDAVVLNMRVRGRISVCGM 259

Query: 182 ISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIA 241
           +SQYN+E+PEGVHNLM +V KRI MEGFL  DF+H +PK+L++V+  IK+GK+VYVEDIA
Sbjct: 260 VSQYNLEQPEGVHNLMHLVPKRIHMEGFLVYDFFHLFPKYLDMVLPYIKQGKIVYVEDIA 319

Query: 242 EGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           EGLE AP+AL G+F G+N+GKQ+VAV+ E
Sbjct: 320 EGLENAPAALTGLFAGRNIGKQVVAVSHE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434189|ref|XP_002279359.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147792339|emb|CAN61471.1| hypothetical protein VITISV_043825 [Vitis vinifera]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/269 (72%), Positives = 233/269 (86%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGIL 61
            P++GYGV+KVLDS HP+++  DLVWG+T WEE+SLI + + L KI  T VPL YYTGIL
Sbjct: 77  SPITGYGVAKVLDSRHPDFRTGDLVWGITGWEEYSLITTDERLFKIQHTDVPLSYYTGIL 136

Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
           GM G+TAY G +E+CSPKKGEYV++SAASGAVGQLVGQF KL+GCYVVGSA +KEKVDLL
Sbjct: 137 GMAGMTAYSGFYEICSPKKGEYVFISAASGAVGQLVGQFAKLLGCYVVGSAGTKEKVDLL 196

Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
           K+KFGFD+AFNYKEE DL+A L R FPEGIDIYFENVGGKMLDAVL+NMR+ G IAVCGM
Sbjct: 197 KNKFGFDEAFNYKEEQDLEACLKRYFPEGIDIYFENVGGKMLDAVLVNMRLHGRIAVCGM 256

Query: 182 ISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIA 241
           ISQYN+E+PEGV NL  +V KRI MEGFL  D+YH YPKFL+L+M  I+EGK+VYVEDIA
Sbjct: 257 ISQYNLEEPEGVRNLFTIVTKRIRMEGFLVFDYYHLYPKFLDLIMPYIREGKIVYVEDIA 316

Query: 242 EGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           EGLE AP+AL+G+++G+NVGKQ+V VARE
Sbjct: 317 EGLESAPTALIGLYSGRNVGKQVVVVARE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117874|ref|XP_002331653.1| predicted protein [Populus trichocarpa] gi|222874049|gb|EEF11180.1| predicted protein [Populus trichocarpa]

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/269 (72%), Positives = 234/269 (86%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGIL 61
            P+SG GV+KVLDS HP+YKK D +WG+T WEE+SLI + + L KI D  VPL YYTGIL
Sbjct: 80  SPISGRGVAKVLDSRHPDYKKGDFIWGITGWEEYSLITATETLFKIHDKDVPLSYYTGIL 139

Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
           GMPG+TAY G +E+CSPKKGE+V++SAASGAVGQLVGQF KL+GCYVVGSA SK+KVDLL
Sbjct: 140 GMPGMTAYAGFYEICSPKKGEFVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 199

Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
           K+KFGFDDAFNYKEE DLDAAL R FP+GIDIYFENVGGK+LDAVLLNMR+ G I+VCGM
Sbjct: 200 KNKFGFDDAFNYKEELDLDAALKRYFPDGIDIYFENVGGKILDAVLLNMRVRGRISVCGM 259

Query: 182 ISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIA 241
           +SQYN+E+PEGVHNLM +V KRI MEGFL   F+H +PK+L++V+  IK+GK+VYVEDIA
Sbjct: 260 VSQYNLEQPEGVHNLMHLVLKRIHMEGFLVYYFFHLFPKYLDMVLPYIKQGKIVYVEDIA 319

Query: 242 EGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           EGLE AP+AL G+F G+N+GKQ+VAV+RE
Sbjct: 320 EGLENAPAALTGLFAGRNIGKQVVAVSRE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434197|ref|XP_002279529.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147783628|emb|CAN68149.1| hypothetical protein VITISV_035666 [Vitis vinifera]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/267 (72%), Positives = 229/267 (85%)

Query: 4   LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGM 63
           +SGYGV+KVLDS HPN+ K DLVWG T WEE++LI +P+ L KI +  VPL YY GILGM
Sbjct: 79  ISGYGVAKVLDSGHPNFSKGDLVWGFTGWEEYTLITAPESLFKIPNNDVPLSYYIGILGM 138

Query: 64  PGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH 123
           PG+TAY G +E+CSPKKGEYVYVSAASGAVGQLVGQF KL+GCYVVGSA SKEKVDLLK+
Sbjct: 139 PGITAYAGFYEICSPKKGEYVYVSAASGAVGQLVGQFAKLIGCYVVGSAGSKEKVDLLKN 198

Query: 124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
           KFGFD+AFNYKEE DL A L R FPEGIDIYFENVGG MLDAVL NMR+ G IA CGMIS
Sbjct: 199 KFGFDEAFNYKEEQDLVACLKRYFPEGIDIYFENVGGPMLDAVLANMRVQGRIAACGMIS 258

Query: 184 QYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEG 243
           QYN++KP GV+NLM ++ K+I M+GF+AG ++H YPKFLE+++  +KEGK+VYVEDIAEG
Sbjct: 259 QYNLDKPVGVYNLMNIIKKQIKMQGFVAGSYFHLYPKFLEMILPHVKEGKVVYVEDIAEG 318

Query: 244 LEKAPSALVGIFTGQNVGKQLVAVARE 270
           LE AP AL+G+F+G+NVGKQ+V VARE
Sbjct: 319 LESAPQALIGLFSGRNVGKQVVLVARE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092848|ref|XP_002309722.1| predicted protein [Populus trichocarpa] gi|118483208|gb|ABK93507.1| unknown [Populus trichocarpa] gi|222852625|gb|EEE90172.1| predicted protein [Populus trichocarpa]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/269 (73%), Positives = 228/269 (84%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGIL 61
            PL GYGV+KVLDS HP +K+ D VWG   WEE+SLI S Q   KI DT VPL YYTGIL
Sbjct: 80  SPLRGYGVAKVLDSRHPGFKEGDFVWGTVGWEEYSLITSFQPFFKIQDTDVPLSYYTGIL 139

Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
           GMPG+TAY G +++CSPKKGE+VY+SAASGAVGQLVGQF KL+GCYVVGSA SKEKVDLL
Sbjct: 140 GMPGMTAYFGFYQVCSPKKGEHVYISAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLL 199

Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
           K+KFGFD+AFNYKEEPDL+AAL R FPEGIDIYFENVGGKMLDAVL NMR  G IAVCGM
Sbjct: 200 KNKFGFDEAFNYKEEPDLNAALGRYFPEGIDIYFENVGGKMLDAVLPNMRFRGRIAVCGM 259

Query: 182 ISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIA 241
           ISQYN++KPEGV NLM VV KR+ +EGF+  D+Y QYPKFL+ V+  I+EGK+ Y+EDI+
Sbjct: 260 ISQYNLDKPEGVFNLMTVVYKRVRIEGFVVTDYYDQYPKFLDFVLPCIREGKIKYMEDIS 319

Query: 242 EGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           EGLE  P+ALVG+F+GQNVGK+LV VARE
Sbjct: 320 EGLENGPAALVGLFSGQNVGKKLVVVARE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147792340|emb|CAN61472.1| hypothetical protein VITISV_043826 [Vitis vinifera]

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 194/267 (72%), Positives = 228/267 (85%)

Query: 4   LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGM 63
           + GYGV+KVLDS HPN+ K DLVWG T+WEE+SLI S ++LIKI  T VPL YYTGILGM
Sbjct: 98  IEGYGVAKVLDSGHPNFSKGDLVWGFTNWEEYSLITSTEMLIKIPTTDVPLSYYTGILGM 157

Query: 64  PGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH 123
           PGLTAY G +E+C+PKKGEYVYVSAASGAVGQLVGQF KL+GCYVVGSA SKEKVDLLK+
Sbjct: 158 PGLTAYAGFYEICTPKKGEYVYVSAASGAVGQLVGQFAKLLGCYVVGSAGSKEKVDLLKN 217

Query: 124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
           KFGFD+AFNYKEE DL A L R FPEGIDIYF+NVGGKMLDAVLLNMR+ G IA CGMIS
Sbjct: 218 KFGFDEAFNYKEETDLVACLKRYFPEGIDIYFDNVGGKMLDAVLLNMRVHGRIAACGMIS 277

Query: 184 QYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEG 243
           QYN++K EGV NL+ ++ K++ M+GF+   +YH YPK+LE+V+  IKEGK+VYVED  EG
Sbjct: 278 QYNLDKLEGVCNLINIIIKQVRMQGFVITSYYHLYPKYLEMVLPHIKEGKIVYVEDTVEG 337

Query: 244 LEKAPSALVGIFTGQNVGKQLVAVARE 270
           LE AP AL+G+F+G+NVGKQ+V VARE
Sbjct: 338 LESAPQALIGLFSGRNVGKQVVVVARE 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434191|ref|XP_002279426.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|296084343|emb|CBI24731.3| unnamed protein product [Vitis vinifera]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 194/267 (72%), Positives = 228/267 (85%)

Query: 4   LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGM 63
           + GYGV+KVLDS HPN+ K DLVWG T+WEE+SLI S ++LIKI  T VPL YYTGILGM
Sbjct: 76  IEGYGVAKVLDSGHPNFSKGDLVWGFTNWEEYSLITSTEMLIKIPTTDVPLSYYTGILGM 135

Query: 64  PGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH 123
           PGLTAY G +E+C+PKKGEYVYVSAASGAVGQLVGQF KL+GCYVVGSA SKEKVDLLK+
Sbjct: 136 PGLTAYAGFYEICTPKKGEYVYVSAASGAVGQLVGQFAKLLGCYVVGSAGSKEKVDLLKN 195

Query: 124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
           KFGFD+AFNYKEE DL A L R FPEGIDIYF+NVGGKMLDAVLLNMR+ G IA CGMIS
Sbjct: 196 KFGFDEAFNYKEETDLVACLKRYFPEGIDIYFDNVGGKMLDAVLLNMRVHGRIAACGMIS 255

Query: 184 QYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEG 243
           QYN++K EGV NL+ ++ K++ M+GF+   +YH YPK+LE+V+  IKEGK+VYVED  EG
Sbjct: 256 QYNLDKLEGVCNLINIIIKQVRMQGFVITSYYHLYPKYLEMVLPHIKEGKIVYVEDTVEG 315

Query: 244 LEKAPSALVGIFTGQNVGKQLVAVARE 270
           LE AP AL+G+F+G+NVGKQ+V VARE
Sbjct: 316 LESAPQALIGLFSGRNVGKQVVVVARE 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444302246|pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302247|pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302248|pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302249|pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302250|pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum gi|444302251|pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/269 (71%), Positives = 228/269 (84%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGIL 61
            P++GYGV+KVL+S  P ++K DLVWG+T WEE+S+I   Q L KI D  VPL YYTGIL
Sbjct: 75  SPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIHDKDVPLSYYTGIL 134

Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
           GMPG+TAY G HE+CSPKKGE V+VSAASGAVGQLVGQF K++GCYVVGSA SKEKVDLL
Sbjct: 135 GMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLL 194

Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
           K KFGFD+AFNYKEE DL AAL R FP+GIDIYFENVGGKMLDAVL+NM++ G IAVCGM
Sbjct: 195 KSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGM 254

Query: 182 ISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIA 241
           ISQYN+E+ EGVHNL  ++ KRI MEGFL  D+YH YPK+LE+V+  IK GK+VYVED+A
Sbjct: 255 ISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVA 314

Query: 242 EGLEKAPSALVGIFTGQNVGKQLVAVARE 270
            GLE AP+ALVG+F+G+N+GKQ+V V+RE
Sbjct: 315 HGLESAPTALVGLFSGRNIGKQVVMVSRE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	270
TAIR|locus:2148166	343	AT5G16990 [Arabidopsis thalian	0.996	0.784	0.711	5.3e-104
TAIR|locus:2148131	345	AER "alkenal reductase" [Arabi	0.996	0.779	0.696	6.9e-102
TAIR|locus:2148186	345	AT5G17000 [Arabidopsis thalian	0.996	0.779	0.692	3e-101
UNIPROTKB|Q6WAU0	342	Q6WAU0 "(+)-pulegone reductase	0.977	0.771	0.694	3.8e-101
TAIR|locus:2097795	350	AT3G03080 [Arabidopsis thalian	0.996	0.768	0.695	3.8e-101
TAIR|locus:2153759	353	AT5G37980 [Arabidopsis thalian	0.996	0.762	0.688	2.7e-100
TAIR|locus:2028736	351	AT1G26320 [Arabidopsis thalian	0.992	0.763	0.698	8.2e-99
TAIR|locus:2153799	353	AT5G37940 [Arabidopsis thalian	0.996	0.762	0.677	1e-98
TAIR|locus:2154041	353	AT5G38000 [Arabidopsis thalian	0.992	0.759	0.672	3.2e-97
TAIR|locus:2148116	346	AT5G16960 [Arabidopsis thalian	0.988	0.771	0.675	5.2e-97

TAIR|locus:2148166 AT5G16990 [Arabidopsis thaliana (taxid:3702)]

 Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
 Identities = 192/270 (71%), Positives = 226/270 (83%)

Query:     2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQS-PQLLIKILDTSVPLPYYTGI 60
             +P+ GYGVS+V++S HP+YKK DL+WG+  WEE+S+I     +  KI  T VPL YYTG+
Sbjct:    74 KPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKIQHTDVPLSYYTGL 133

Query:    61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
             LGMPG+TAY G +E+CSPKKGE VYVSAASGAVGQLVGQF K++GCYVVGSA SKEKVDL
Sbjct:   134 LGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDL 193

Query:   121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
             LK KFGFDDAFNYKEE DL AAL RCFP+GID+YFENVGGKMLDAVLLNM   G IAVCG
Sbjct:   194 LKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCG 253

Query:   181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
             MISQYN+E  EGVHNL  ++ KRI ++GF+  DFY +YPKFLELV+  IKEGK+ YVED+
Sbjct:   254 MISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEGKITYVEDV 313

Query:   241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
             A+GLEKAP ALVG+F G+NVGKQ+V +ARE
Sbjct:   314 ADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2148131 AER "alkenal reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
 Identities = 188/270 (69%), Positives = 223/270 (82%)

Query:     2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQS-PQLLIKILDTSVPLPYYTGI 60
             QP+ GYGVS++++S HP+YKK DL+WG+ +WEE+S+I        KI  T VPL YYTG+
Sbjct:    76 QPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGL 135

Query:    61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
             LGMPG+TAY G +E+CSPK+GE VYVSAASGAVGQLVGQ  K++GCYVVGSA SKEKVDL
Sbjct:   136 LGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL 195

Query:   121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
             LK KFGFDDAFNYKEE DL AAL RCFP GIDIYFENVGGKMLDAVL+NM + G IAVCG
Sbjct:   196 LKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCG 255

Query:   181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
             MISQYN+E  EGVHNL  ++ KRI ++GF+  DFY +Y KFLE V+  I+EGK+ YVED+
Sbjct:   256 MISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDV 315

Query:   241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
             A+GLEKAP ALVG+F G+NVGKQ+V VARE
Sbjct:   316 ADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP;IMP

GO:0032440 "2-alkenal reductase [NAD(P)

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2148186 AT5G17000 [Arabidopsis thaliana (taxid:3702)]

 Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
 Identities = 187/270 (69%), Positives = 221/270 (81%)

Query:     2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQS-PQLLIKILDTSVPLPYYTGI 60
             +P+ GYGVS+V++S HP+YKK DL+WG+  WEE+S+I     +  KI  T +PL YYTG+
Sbjct:    76 KPIFGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMTHMHFKIQHTDIPLSYYTGL 135

Query:    61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
             LGMPG+TAY G +E+CSPK+GE VYVSAASGAVGQLVGQF K++GCYVVGSA S EKVDL
Sbjct:   136 LGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSTEKVDL 195

Query:   121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
             LK KFGFDDAFNYKEEPDL AAL RCFP GIDIYFENVGGKMLDAVLLNM   G IAVCG
Sbjct:   196 LKTKFGFDDAFNYKEEPDLSAALKRCFPTGIDIYFENVGGKMLDAVLLNMNPHGRIAVCG 255

Query:   181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
             MISQYN+E  EGVHNL  ++ KRI ++GF   DFY +Y KFL+ V+  IKEGK+ YVED+
Sbjct:   256 MISQYNLENQEGVHNLSNIIYKRIRIQGFAVFDFYEKYSKFLDFVLPHIKEGKITYVEDV 315

Query:   241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
             A+GLEK P ALVG+F G+NVGKQ+V +ARE
Sbjct:   316 ADGLEKGPEALVGLFHGKNVGKQVVVIARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=IEP

UNIPROTKB|Q6WAU0 Q6WAU0 "(+)-pulegone reductase" [Mentha x piperita (taxid:34256)]

 Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
 Identities = 184/265 (69%), Positives = 227/265 (85%)

Query:     7 YGVSKVLDSTHPNYKKDDLVWGLTS-WEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPG 65
             YGVSKVLDSTHP+Y+K +L+WG  + WEE++LIQ+P  L KI D  VPL YY GILGMPG
Sbjct:    78 YGVSKVLDSTHPSYEKGELIWGSQAGWEEYTLIQNPYNLFKIQDKDVPLSYYVGILGMPG 137

Query:    66 LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
             +TAY G  E+CSPKKGE V+V+AA+G+VGQLVGQF K+ GCYVVGSA SKEKVDLLK+KF
Sbjct:   138 MTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYVVGSAGSKEKVDLLKNKF 197

Query:   126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQY 185
             GFDDAFNYKEE D D AL R FPEGIDIYF+NVGGKML+AV+ NMR+ G IAVCGM+SQY
Sbjct:   198 GFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVINNMRVHGRIAVCGMVSQY 257

Query:   186 NIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLE 245
             ++++PEGVHNL++++ K+I M+GF+  D+YH YPKFLE+V+  IKEGK+ YVEDI+EGLE
Sbjct:   258 SLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLEMVLPRIKEGKVTYVEDISEGLE 317

Query:   246 KAPSALVGIFTGQNVGKQLVAVARE 270
              APSAL+G++ G+NVG Q+VAV+RE
Sbjct:   318 SAPSALLGVYVGRNVGNQVVAVSRE 342

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052579 "(+)-pulegone reductase, (+)-isomenthone as substrate, activity" evidence=IDA

GO:0052580 "(+)-pulegone reductase, (-)-menthone as substrate, activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

TAIR|locus:2097795 AT3G03080 [Arabidopsis thaliana (taxid:3702)]

 Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
 Identities = 187/269 (69%), Positives = 223/269 (82%)

Query:     2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGIL 61
             +P+ G+ VSKV+DS HP+YKK DL+WGL  W E+SLI       KI  T VPL YYTG+L
Sbjct:    82 EPIYGFSVSKVIDSGHPDYKKGDLLWGLVGWGEYSLITPDFSHYKIQHTDVPLSYYTGLL 141

Query:    62 GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
             GMPG+TAY G +E+CSPKKGE V+VSAASGAVGQLVGQF K++GCYVVGSA S EKVDLL
Sbjct:   142 GMPGMTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKIMGCYVVGSAGSNEKVDLL 201

Query:   122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
             K+KFGFDDAFNYK EPDL+AAL RCFPEGIDIYFENVGGKMLDAVLLNM++ G IAVCGM
Sbjct:   202 KNKFGFDDAFNYKAEPDLNAALKRCFPEGIDIYFENVGGKMLDAVLLNMKLHGRIAVCGM 261

Query:   182 ISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIA 241
             ISQYN+E  EGVHNL  V+ KRI ++GF+  D++ ++ KFL+ V+  I+EGK+ YVED+ 
Sbjct:   262 ISQYNLEDQEGVHNLANVIYKRIRIKGFVVSDYFDKHLKFLDFVLPYIREGKITYVEDVV 321

Query:   242 EGLEKAPSALVGIFTGQNVGKQLVAVARE 270
             EGLE  PSAL+G+F G+NVGKQL+AVARE
Sbjct:   322 EGLENGPSALLGLFHGKNVGKQLIAVARE 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2153759 AT5G37980 [Arabidopsis thaliana (taxid:3702)]

 Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
 Identities = 186/270 (68%), Positives = 223/270 (82%)

Query:     2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQ-SPQLLIKILDTSVPLPYYTGI 60
             +P+SG+GV+K +DS HPNYK  DL+WG   WEE+S+I  +P    KI  T VPL +YTG+
Sbjct:    84 KPISGFGVAKAIDSCHPNYKTGDLLWGRVGWEEYSVITPTPSSHFKIHHTDVPLSFYTGL 143

Query:    61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
             LG+PGLTAY G +E+CSPKKGE V+VSAASGAVGQLVGQF K+ GCYVVGSA SKEKVDL
Sbjct:   144 LGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSASSKEKVDL 203

Query:   121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
             LK KFG+D+AFNYKEE DL AAL RCFPEGIDIYFENVGGKMLDAVL NMR  G IA CG
Sbjct:   204 LKTKFGYDEAFNYKEEHDLSAALKRCFPEGIDIYFENVGGKMLDAVLENMRTHGRIAACG 263

Query:   181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
             MISQYN+++PEGVHNL  +V KRI ++GF A +F+ +Y KFL+ ++  ++EGK+ YVEDI
Sbjct:   264 MISQYNLKEPEGVHNLASIVYKRIRVQGFAAVEFFDKYSKFLDFILPYVREGKITYVEDI 323

Query:   241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
             A+GLE  PSAL+G+F G+NVGKQLVAVARE
Sbjct:   324 AQGLENGPSALIGLFHGKNVGKQLVAVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2028736 AT1G26320 [Arabidopsis thaliana (taxid:3702)]

 Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
 Identities = 188/269 (69%), Positives = 218/269 (81%)

Query:     3 PLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQ-SPQLLIKILDTSVPLPYYTGIL 61
             P+ G GVSKV+DS HP+YKK DL+WGL  WEE+S+I  +     KI  T VPL YYTG+L
Sbjct:    83 PIIGLGVSKVIDSGHPDYKKGDLLWGLVGWEEYSVITLTTYSHFKIEHTDVPLSYYTGLL 142

Query:    62 GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
             GMPG+TAY G +E+CSPKKGE V+VSAASGAVGQLVGQF KL+GCYVVGSA SKEKV LL
Sbjct:   143 GMPGMTAYAGFYEVCSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVYLL 202

Query:   122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
             K KFGFDDAFNYKEE D  AAL R FPEGIDIYFENVGGKMLDAVL+NM++ G +AVCGM
Sbjct:   203 KTKFGFDDAFNYKEEKDFSAALKRYFPEGIDIYFENVGGKMLDAVLINMKLHGRVAVCGM 262

Query:   182 ISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIA 241
             ISQYN+  PEGVHNL  ++ KRI ++GF   DFY +YPKFL+ V+  I+EGK+ YVEDIA
Sbjct:   263 ISQYNLVDPEGVHNLPTILYKRIQLQGFGVCDFYDKYPKFLDFVLPYIREGKITYVEDIA 322

Query:   242 EGLEKAPSALVGIFTGQNVGKQLVAVARE 270
             EG E  PSAL+G+F G+NVGKQL  VARE
Sbjct:   323 EGFESGPSALLGLFEGKNVGKQLFVVARE 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153799 AT5G37940 [Arabidopsis thaliana (taxid:3702)]

 Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
 Identities = 183/270 (67%), Positives = 220/270 (81%)

Query:     2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQ-SPQLLIKILDTSVPLPYYTGI 60
             +P+SG+GV+K +DS HPNYK  DL+WG   WEE+S+I  +P    KI  T VPL +YTG+
Sbjct:    84 KPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHFKIHHTDVPLSFYTGL 143

Query:    61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
             LG+PGLTAY G +E+CSPKKGE V+VSAASGAVGQLVGQF K+ GCYVVGSA SKEKVDL
Sbjct:   144 LGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSASSKEKVDL 203

Query:   121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
             LK KFG+DDAFNYKEE DL AAL RCFPEGIDIYFENVGGKMLDAVL NMR  G IA CG
Sbjct:   204 LKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKMLDAVLQNMRTHGRIAACG 263

Query:   181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
             MISQYN+++PEG+HN   +V KRI ++ F A +F+ +Y KFL+ ++  ++EGK+ YVEDI
Sbjct:   264 MISQYNLKEPEGLHNTATIVHKRIRVQDFAAVEFFDRYSKFLDFILPHVREGKITYVEDI 323

Query:   241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
             A+GLE  PSAL+G+F G+NVGKQLV VARE
Sbjct:   324 AQGLENGPSALIGLFHGKNVGKQLVEVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2154041 AT5G38000 [Arabidopsis thaliana (taxid:3702)]

 Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
 Identities = 181/269 (67%), Positives = 219/269 (81%)

Query:     2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQ-SPQLLIKILDTSVPLPYYTGI 60
             +P+SG+GV+K +DS HPNYK  DL+WG   WEE+S+I  +P    KI  T VPL +YTG+
Sbjct:    84 KPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHFKIHHTDVPLSFYTGL 143

Query:    61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
             LG+PGLTAY G +E+CSPKKGE V+VSAASGAVGQLVGQF K+ GCYVVGSA S+EKVDL
Sbjct:   144 LGIPGLTAYIGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSASSEEKVDL 203

Query:   121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
             LK KFG+DDAFNYKEE DL AAL RCFPEGIDIYFENVGGKML+AVL NMR  G IA CG
Sbjct:   204 LKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKMLEAVLENMRTHGRIAACG 263

Query:   181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
             MISQYN++KPE +HN   +V KRI ++GF A +F+ +Y KFL+ ++  ++EGKL YVEDI
Sbjct:   264 MISQYNLKKPEVLHNTATIVHKRIRVQGFAAVEFFDRYSKFLDFILPHVREGKLTYVEDI 323

Query:   241 AEGLEKAPSALVGIFTGQNVGKQLVAVAR 269
             ++GLE  PSAL+G+F G+NVGKQLV VAR
Sbjct:   324 SQGLENGPSALIGLFHGKNVGKQLVEVAR 352

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2148116 AT5G16960 [Arabidopsis thaliana (taxid:3702)]

 Score = 964 (344.4 bits), Expect = 5.2e-97, P = 5.2e-97
 Identities = 181/268 (67%), Positives = 221/268 (82%)

Query:     2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQS-PQLLIKILDTSVPLPYYTGI 60
             +P+SG+GVSKV+DS H +Y++ DL+WG   WEE+S+I   P L  KI  T+ PL YYTG+
Sbjct:    77 KPISGFGVSKVIDSGHSDYEEGDLIWGAVGWEEYSVITPIPNLHFKIHHTNFPLSYYTGL 136

Query:    61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
             LGMPG+TAY G +E+C+PKKG+ V+VSAASGAVGQLVGQF KL+GCYVVGSA SKEKVDL
Sbjct:   137 LGMPGMTAYVGFYEICTPKKGDTVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDL 196

Query:   121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
             LK+KFGFDDAFNYKEE +L  AL RCFPEGIDIYFENVGGKMLDAV+LNMR  G IA CG
Sbjct:   197 LKNKFGFDDAFNYKEEHNLIGALKRCFPEGIDIYFENVGGKMLDAVILNMRPHGRIAACG 256

Query:   181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
             MISQYN++ PEG++ L  +  KRI +EGF   D++H+Y +FLE V+  IKEGK+ YVED+
Sbjct:   257 MISQYNLKNPEGIYGLSLITYKRIRIEGFNCFDYFHKYSEFLEFVVPYIKEGKIKYVEDV 316

Query:   241 AEGLEKAPSALVGIFTGQNVGKQLVAVA 268
             A+GLE AP+ALVG+F G+NVGKQLV V+
Sbjct:   317 ADGLESAPAALVGLFHGKNVGKQLVVVS 344

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39173	P2_ARATH	1, ., 3, ., 1, ., 7, 4	0.7111	0.9962	0.7842	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	0.963
3rd Layer	1.3.1.74	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_VII0439 hypothetical protein (345 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	270
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	1e-167
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	1e-137
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	1e-120
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	5e-99
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	9e-84
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	3e-60
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	1e-55
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	1e-38
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	4e-21
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	1e-18
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	2e-18
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	4e-18
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	3e-17
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	2e-15
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	5e-15
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	6e-15
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	4e-14
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	5e-14
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	1e-13
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	4e-13
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	1e-12
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	2e-12
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	2e-12
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-11
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	2e-11
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	1e-10
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	1e-10
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	5e-09
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	6e-09
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	1e-08
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	2e-08
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-08
smart00829	287	smart00829, PKS_ER, Enoylreductase	4e-08
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	4e-07
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-06
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	3e-06
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	4e-06
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	5e-06
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	5e-06
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	1e-05
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-05
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	4e-05
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	4e-05
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	6e-05
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	1e-04
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	2e-04
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	2e-04
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	3e-04
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	4e-04
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	4e-04
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	6e-04
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	8e-04
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	0.001
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	0.002
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	0.002

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score =  466 bits (1201), Expect = e-167
 Identities = 185/266 (69%), Positives = 216/266 (81%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGIL 61
           + ++GYGV+KV+DS +P++K  DLVWG T WEE+SLI   Q L KI  T VPL YY G+L
Sbjct: 73  EVITGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLL 132

Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
           GMPGLTAY G +E+C PKKGE V+VSAASGAVGQLVGQ  KL GCYVVGSA S EKVDLL
Sbjct: 133 GMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL 192

Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
           K+K GFDDAFNYKEEPDLDAAL R FP GIDIYF+NVGGKMLDAVLLNM + G IA CGM
Sbjct: 193 KNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGM 252

Query: 182 ISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIA 241
           ISQYN+E PEGV NL+ ++ KR+ ++GFL GD+ H+YP+FLE +   IKEGKL YVEDIA
Sbjct: 253 ISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIA 312

Query: 242 EGLEKAPSALVGIFTGQNVGKQLVAV 267
           +GLE AP A VG+FTG N+GKQ+V V
Sbjct: 313 DGLESAPEAFVGLFTGSNIGKQVVKV 338

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score =  389 bits (1001), Expect = e-137
 Identities = 172/271 (63%), Positives = 215/271 (79%), Gaps = 2/271 (0%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQL-LIKI-LDTSVPLPYYTG 59
           Q + G+GVSKV+DS  PN+K  DL+ G+T WEE+SLI+S    L KI L   +PL Y+ G
Sbjct: 78  QRIEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLG 137

Query: 60  ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
           +LGM G TAY G +E+CSPKKG+ V+VSAASGAVGQLVGQ  KL GCYVVGSA S +KVD
Sbjct: 138 LLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD 197

Query: 120 LLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVC 179
           LLK+K GFD+AFNYKEEPDLDAAL R FPEGIDIYF+NVGG MLDA LLNM+I G IAVC
Sbjct: 198 LLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVC 257

Query: 180 GMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVED 239
           GM+S  ++   +G+HNL  ++ KRI M+GFL  D+ H +P+FLE V    K+GK+VY+ED
Sbjct: 258 GMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIED 317

Query: 240 IAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           ++EGLE AP+ALVG+F+G+NVGKQ++ VA+E
Sbjct: 318 MSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348

Length = 348

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  346 bits (889), Expect = e-120
 Identities = 128/265 (48%), Positives = 173/265 (65%), Gaps = 2/265 (0%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTS-VPLPYYTGI 60
           +P+ G GV +V++S  P++K  DLV G   W+E++++     L K+  +  +PL  Y G+
Sbjct: 66  EPMRGGGVGEVVESRSPDFKVGDLVSGFLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGV 125

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           LGM GLTAY GL E+  PK GE V VSAA+GAVG +VGQ  KL+G  VVG A S EK   
Sbjct: 126 LGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRW 185

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           L  + GFD A NYK  PDL  AL    P+GID+YF+NVGG++LDA L  +   G IA+CG
Sbjct: 186 LVEELGFDAAINYKT-PDLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCG 244

Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
            ISQYN  +P G  NL  ++ KR+ M+GF+  D+  ++P+ L  +   + EGKL Y ED+
Sbjct: 245 AISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDV 304

Query: 241 AEGLEKAPSALVGIFTGQNVGKQLV 265
            EGLE AP A +G+FTG+N GK +V
Sbjct: 305 VEGLENAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  292 bits (750), Expect = 5e-99
 Identities = 123/268 (45%), Positives = 167/268 (62%), Gaps = 4/268 (1%)

Query: 3   PLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILG 62
            + G  V+KV+ S HP ++  D+V G++ W+E+++    + L K+  +  PL  Y G+LG
Sbjct: 74  VMVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAIS-DGEGLRKLDPSPAPLSAYLGVLG 132

Query: 63  MPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK 122
           MPGLTAY GL ++  PK GE V VSAA+GAVG +VGQ  KL GC VVG A   EK D L 
Sbjct: 133 MPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLT 192

Query: 123 HKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI 182
            + GFD   +YK E D   AL    P+GID+YFENVGG++LDAVL  + +   I VCG I
Sbjct: 193 EELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAI 251

Query: 183 SQYN-IEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYP-KFLELVMLAIKEGKLVYVEDI 240
           SQYN  E P G   L  ++ KR+ ++GF+    Y Q   + L  +   +KEGK+ Y E I
Sbjct: 252 SQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETI 311

Query: 241 AEGLEKAPSALVGIFTGQNVGKQLVAVA 268
            +GLE AP A +G+ +G+N GK +V VA
Sbjct: 312 VDGLENAPEAFIGLLSGKNFGKLVVKVA 339

Length = 340

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score =  253 bits (649), Expect = 9e-84
 Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 8/272 (2%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQ-----LLIKILDTSVPLPY 56
             + G  V+KV++S +  +    +V     W   ++           L   L   +P   
Sbjct: 60  DTMIGTQVAKVIESKNSKFPVGTIVVASFGWRTHTVSDGKDQPDLYKLPADLPDDLPPSL 119

Query: 57  YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE 116
             G+LGMPGLTAY GL E+C PK GE V V+ A+GAVG LVGQ  K+ GC V+G A S +
Sbjct: 120 ALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDD 179

Query: 117 KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHI 176
           KV  LK + GFD  FNYK    L+ AL    P+GID YF+NVGG+    VL +M   G +
Sbjct: 180 KVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRV 237

Query: 177 AVCGMISQYNIEKPEGVHNL-MQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV 235
           AVCG IS YN ++P+    +   ++ K++ MEGF+   +  ++P+ L+ ++  IKEGKL 
Sbjct: 238 AVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLK 297

Query: 236 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267
           Y E + EG E  P A +G+  G+N GK +V V
Sbjct: 298 YREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score =  193 bits (491), Expect = 3e-60
 Identities = 111/268 (41%), Positives = 155/268 (57%), Gaps = 9/268 (3%)

Query: 4   LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQL---LIKILDTSVPLPYYTGI 60
           + G  V++V++S +    K  +V     W   S+     L   L +  DT +PL    G 
Sbjct: 60  MMGQQVARVVESKNVALPKGTIVLASPGWTSHSISDGKDLEKLLTEWPDT-LPLSLALGT 118

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           +GMPGLTAY GL E+C  K GE V V+AA+GAVG +VGQ  KL GC VVG+A S EKV  
Sbjct: 119 VGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAY 178

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           LK K GFD AFNYK    L+  L +  P+G D YF+NVGG+  + V+  M+  G IA+CG
Sbjct: 179 LK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 237

Query: 181 MISQYNI--EKPEGVHNLMQVVGKRICMEGFLAGDFYHQY-PKFLELVMLAIKEGKLVYV 237
            IS YN     P G    + V+ + + MEGF+   +  +   K L+ ++  + EGK+ Y 
Sbjct: 238 AISTYNRTGPLPPGPPPEI-VIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK 296

Query: 238 EDIAEGLEKAPSALVGIFTGQNVGKQLV 265
           E + EG E  P+A +G+  G+N+GK +V
Sbjct: 297 EYVIEGFENMPAAFMGMLKGENLGKTIV 324

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score =  181 bits (462), Expect = 1e-55
 Identities = 103/279 (36%), Positives = 149/279 (53%), Gaps = 18/279 (6%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLT-SWEEFSLIQSPQLLIKILDTSV--PLPYYT 58
           Q L G GV  V +S H  +   D+V      W+ ++++     L K+    V   L Y+ 
Sbjct: 72  QVLDGGGVGVVEESKHQKFAVGDIVTSFNWPWQTYAVL-DGSSLEKVDPQLVDGHLSYFL 130

Query: 59  GILGMPGLTAYGGLHE--LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSK 115
           G +G+PGLTA  G+ E    +P   + + VS A+GA G L GQ  +L+GC  VVG   S 
Sbjct: 131 GAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSD 190

Query: 116 EKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGH 175
           EK  LLK + GFD A NYK + ++   L    PEG+D+YF+NVGG++ D V+  M    H
Sbjct: 191 EKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSH 249

Query: 176 IAVCGMISQYNIEKP------EGVHNLMQVVGKR-ICMEGFLAGDFYHQYPKFLELVMLA 228
           I +CG ISQYN + P      E       ++ +R I  E FL  ++  ++ + +  +   
Sbjct: 250 IILCGQISQYNKDVPYPPPLPEATE---AILKERNITRERFLVLNYKDKFEEAIAQLSQW 306

Query: 229 IKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267
           +KEGKL   E + EGLE A  A   +  G N+GKQ+V V
Sbjct: 307 VKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  137 bits (347), Expect = 1e-38
 Identities = 74/207 (35%), Positives = 110/207 (53%), Gaps = 8/207 (3%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
           GLTA   L E+   K GE V V+AA+G  GQ   Q  KL GC+V+G+  S EK + LK  
Sbjct: 124 GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-S 182

Query: 125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQ 184
            G D   NYK E DL   L + +P+G+D+ +E+VGG+M D  + N+ + G + V G IS 
Sbjct: 183 LGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISG 241

Query: 185 YNIEK---PEGVHNL-MQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
           Y       P     L  +++ K   + GF    +    P+ L+ ++   + GKLV   D 
Sbjct: 242 YQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDP 301

Query: 241 AE--GLEKAPSALVGIFTGQNVGKQLV 265
               GLE    A+  +++G+N+GK +V
Sbjct: 302 TRFRGLESVADAVDYLYSGKNIGKVVV 328

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 89.3 bits (222), Expect = 4e-21
 Identities = 53/166 (31%), Positives = 73/166 (43%), Gaps = 10/166 (6%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           L  P  TAY  L      K G+ V V  A G VG L  Q  K  G  V+ + RS EK++L
Sbjct: 115 LPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL 173

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKM-LDAVLLNMRICGHIAVC 179
            K + G D   +YKEE DL+  L      G D+  + VGG   L   L  +R  G I V 
Sbjct: 174 AK-ELGADHVIDYKEE-DLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVV 231

Query: 180 GMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELV 225
           G  S            L +++ K + + G   G     + + L+L+
Sbjct: 232 GGTSGGPPLDD-----LRRLLFKELTIIGSTGGT-REDFEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 83.2 bits (206), Expect = 1e-18
 Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 7/210 (3%)

Query: 60  ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
            L + GLTA+  L +    K GE V V  A+G VG    Q  K +G  VV    S EK++
Sbjct: 122 ALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE 181

Query: 120 LLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVC 179
           LLK + G D   NY+EE  ++        +G+D+  + VGG    A L  +   G +   
Sbjct: 182 LLK-ELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSI 240

Query: 180 GMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQ-YPKFLELVMLAIKEGKLVYVE 238
           G +S      P    NL+ ++GKR+ + G   G    +   + L  +   +  GKL  V 
Sbjct: 241 GALS----GGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVI 296

Query: 239 DIAEGLEKAPSALVGIF-TGQNVGKQLVAV 267
           D    L +AP+A   +    +  GK ++ V
Sbjct: 297 DRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 82.6 bits (205), Expect = 2e-18
 Identities = 66/237 (27%), Positives = 96/237 (40%), Gaps = 41/237 (17%)

Query: 49  DTSVPLP----YYTGI-LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKL 103
           D  VPLP    +  G  LG+P LTAY  L      K GE V V   SGAVG    Q  + 
Sbjct: 108 DQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARW 167

Query: 104 VGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKML 163
            G  V+ +A S E  +L++ + G D  FNY+ E   D  L     +G+D+  E +    L
Sbjct: 168 AGARVIATASSAEGAELVR-QAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNL 226

Query: 164 DAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLE 223
            A  L++     +A  G I  Y      G   +  ++ K   + G               
Sbjct: 227 -AKDLDV-----LAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGV-------------- 266

Query: 224 LVMLAIKEGKLVYVEDIAEG---------------LEKAPSALVGIFTGQNVGKQLV 265
           L+  A  E +    E IA G               LE+A +A   + +G  +GK ++
Sbjct: 267 LLYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVL 323

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 81.8 bits (203), Expect = 4e-18
 Identities = 42/141 (29%), Positives = 60/141 (42%), Gaps = 7/141 (4%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           L + GLTA+  L EL   K G+ V +  A+G VG    Q  K  G  V+ +A S    D 
Sbjct: 125 LPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATA-SAANADF 183

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIA-VC 179
           L+   G D+  +Y +     AA     P G+D   + VGG+ L   L  ++  G +  + 
Sbjct: 184 LR-SLGADEVIDYTKGDFERAAA----PGGVDAVLDTVGGETLARSLALVKPGGRLVSIA 238

Query: 180 GMISQYNIEKPEGVHNLMQVV 200
           G        K  GV      V
Sbjct: 239 GPPPAEQAAKRRGVRAGFVFV 259

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 79.5 bits (197), Expect = 3e-17
 Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 10/201 (4%)

Query: 66  LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
            TAY  L      + GE V V  A+G VG    Q  K +G  V+ +A S+EK+ L +   
Sbjct: 125 GTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-AL 183

Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQY 185
           G D   +Y++    +         G+D+ ++ VGG + +A L ++   G + V G  S  
Sbjct: 184 GADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASG- 242

Query: 186 NIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAI----KEGKLVYVEDIA 241
             E P+   NL+ +  K I + G   G +  + P+ L   +  +     EGK+       
Sbjct: 243 --EIPQIPANLLLL--KNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAV 298

Query: 242 EGLEKAPSALVGIFTGQNVGK 262
             LE+A  AL  +   +  GK
Sbjct: 299 FPLEQAAEALRALADRKATGK 319

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 74.4 bits (184), Expect = 2e-15
 Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 12/146 (8%)

Query: 66  LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
            TA+  L +L   K GE V +   +  VG    Q  K +G  V+ +A S+EK++  +   
Sbjct: 125 FTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-AL 183

Query: 126 GFDDAFNYKEEPDLDAALNRCF-PEGIDIYFENVGGKMLDAVL--LNMRICGHIAVCGMI 182
           G D A NY+ E D    +       G+D+  + VGG  L   L  L     G + + G++
Sbjct: 184 GADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPD--GRLVLIGLL 240

Query: 183 SQYNIEKPEGVHNLMQVVGKRICMEG 208
                E      +L  ++ KR+ + G
Sbjct: 241 GGAKAEL-----DLAPLLRKRLTLTG 261

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 73.4 bits (181), Expect = 5e-15
 Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 9/173 (5%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           L M  LTAYG L EL   + G+ V ++AAS +VG    Q     G  V+ + R+ EK D 
Sbjct: 125 LWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA 184

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNR-CFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVC 179
           L    G        EE DL A + R    +G+D+ F+ VGG     +   +   G + V 
Sbjct: 185 LL-ALGAAHVIVTDEE-DLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVY 242

Query: 180 GMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEG 232
           G +S      P     L   + K +   G+   +     P+     +  I +G
Sbjct: 243 GALSGEPTPFP-----LKAALKKSLTFRGYSLDEITLD-PEARRRAIAFILDG 289

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 69.6 bits (171), Expect = 6e-15
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 9/136 (6%)

Query: 92  AVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEG 150
            VG    Q  K +G   V+   RS+EK++L K + G D   NY++E  ++         G
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAK-ELGADHVINYRDEDFVERVRELTGGRG 59

Query: 151 IDIYFENVG-GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF 209
           +D+  + VG    L+  L  +R  G + V G+     +  P     L  ++ K + + G 
Sbjct: 60  VDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFP-----LRDLLLKELTILGS 114

Query: 210 LAGDFYHQYPKFLELV 225
           L G    ++ + LEL+
Sbjct: 115 LGGG-REEFEEALELL 129

Length = 131

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 70.7 bits (174), Expect = 4e-14
 Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 15/186 (8%)

Query: 79  KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPD 138
           + GE V V  A   VG    Q  KL G  V+ +A S++K++  K + G D   +Y++E  
Sbjct: 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDYRKEDF 223

Query: 139 LDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQ 198
           +          G+D+  E+VG    +  L ++   G +  CG  + Y     E   +L  
Sbjct: 224 VREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRH 278

Query: 199 VVGKRICMEGFLAGDF--YHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFT 256
           V  +++ + G   G      +  + +         GKL  V D    LE+A  A   + +
Sbjct: 279 VFWRQLSILGSTMGTKAELDEALRLVF-------RGKLKPVIDSVFPLEEAAEAHRRLES 331

Query: 257 GQNVGK 262
            +  GK
Sbjct: 332 REQFGK 337

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 70.3 bits (173), Expect = 5e-14
 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 3/115 (2%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
           G+TA+ GL +  + + G+ V +   +G VG +  Q  K  G  V  +A S EK    +  
Sbjct: 129 GITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-S 186

Query: 125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVC 179
            G D    Y+E    +         G D+ F+ VGG+ LDA    + + G +   
Sbjct: 187 LGADPIIYYRETVV-EYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSI 240

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 69.5 bits (171), Expect = 1e-13
 Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 22/215 (10%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH 123
            LTAY  L EL + + G+ V V +A+G VG   GQ  K V    VVG+A S  K + LK 
Sbjct: 123 YLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK- 180

Query: 124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
           + G     +Y+ + D    + +  PEG+DI  + +GG+        ++  G + V G  +
Sbjct: 181 ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAAN 239

Query: 184 QYNIEKPEGVH-----------NLMQVVG--KRICMEGFLAGDFYHQYPKFLELV---ML 227
               EK                + M+++   K +   GF  G  + +     E++   + 
Sbjct: 240 LVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVL--GFNLGWLFEERELLTEVMDKLLK 297

Query: 228 AIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGK 262
             +EGK+    D     E+   A+  + + +N+GK
Sbjct: 298 LYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGK 332

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 67.7 bits (166), Expect = 4e-13
 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 2/115 (1%)

Query: 64  PGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH 123
            GLTAY  L +    + G  + ++  +G VG    Q  K  G  V+ +  SK   + +K 
Sbjct: 125 AGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK- 182

Query: 124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAV 178
             G D   +Y +E   +         G+D   + VGG+   A+   +   GH+  
Sbjct: 183 SLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVC 237

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 66.3 bits (163), Expect = 1e-12
 Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 3/122 (2%)

Query: 63  MPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK 122
           + GLTA+  L E    K G+ V V AA+G VG L+ Q+ K +G  V+G+  S+EK +L +
Sbjct: 119 LQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR 178

Query: 123 HKFGFDDAFNYKEEPDLDAALNR-CFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
              G D   NY++E D    +       G+D+ ++ VG    +  L ++R  G +   G 
Sbjct: 179 -AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGN 236

Query: 182 IS 183
            S
Sbjct: 237 AS 238

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 65.7 bits (161), Expect = 2e-12
 Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 15/205 (7%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           L + GLTA   L +    K G+ V ++ ASG VG    Q  K +G +V G   ++   +L
Sbjct: 124 LPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCSTR-NAEL 182

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG---KMLDAVLLNMRICGHIA 177
           ++   G D+  +Y  E  +         E  D+ F+ VG     +  A L       +++
Sbjct: 183 VRS-LGADEVIDYTTEDFVALTAGG---EKYDVIFDAVGNSPFSLYRASLALKPGGRYVS 238

Query: 178 VCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV 237
           V G  S   +        L    G+R  ++ FLA        + LE +   ++EGKL  V
Sbjct: 239 VGGGPSGLLLVLLLLPLTLG-GGGRR--LKFFLAKP----NAEDLEQLAELVEEGKLKPV 291

Query: 238 EDIAEGLEKAPSALVGIFTGQNVGK 262
            D    LE AP A   + +G+  GK
Sbjct: 292 IDSVYPLEDAPEAYRRLKSGRARGK 316

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 11/208 (5%)

Query: 66  LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
           LTA+  L +    KKG+ V + A +  VG    Q  +  G   + +  S+EKVD  K K 
Sbjct: 126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KL 184

Query: 126 GFDDAFNYKEEPDLDAALNRCF-PEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQ 184
                  Y +E      + +    +G+++  + VGG  L      + + G   V G +  
Sbjct: 185 AAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGG 244

Query: 185 YNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPK-----FLELVMLAIKEGKLVYVED 239
             +EK     NL+ ++ KR  +          +Y       F   V+  ++EG++  + D
Sbjct: 245 AKVEKF----NLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVD 300

Query: 240 IAEGLEKAPSALVGIFTGQNVGKQLVAV 267
               LE+   A   +   +N+GK ++ V
Sbjct: 301 RTYPLEEVAEAHTFLEQNKNIGKVVLTV 328

Length = 334

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 65/280 (23%), Positives = 106/280 (37%), Gaps = 33/280 (11%)

Query: 8   GVSKVLDSTHP--NYKKDDLVW----GLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGIL 61
           GV +V+       + K  D V     GL +W   +++     LIK+ +   P       L
Sbjct: 71  GVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVV-PADDLIKVPNDVDPEQA--ATL 127

Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
            +   TAY  L +    + G++V  + A+ AVGQ V Q  KL+G   +   R +  ++ L
Sbjct: 128 SVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEEL 187

Query: 122 K---HKFGFDDAFNYKEEPDLDAA--LNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHI 176
           K      G D     +E   L A   L         +    VGGK    +   +   G +
Sbjct: 188 KERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTM 247

Query: 177 AVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLA-----IKE 231
              G +S   +  P        ++ K I + GF    +  +     +  ML      I+E
Sbjct: 248 VTYGGMSGQPVTVPTS-----LLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIRE 302

Query: 232 GKLVYV------EDIAEGLEKAPSALVGIFTGQNVGKQLV 265
           GKL         +D  E  + A +  +    G   GKQ++
Sbjct: 303 GKLKAPPVEKVTDDPLEEFKDALANALKGGGG---GKQVL 339

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 62.6 bits (153), Expect = 2e-11
 Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 8/149 (5%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
           GLTA+  L  L   K G+ V V    G V     QF K  G  V+ ++ S EK++  K  
Sbjct: 145 GLTAWNALFGLGPLKPGDTVLVQGTGG-VSLFALQFAKAAGARVIATSSSDEKLERAK-A 202

Query: 125 FGFDDAFNYKEEPDLDAALNRCFP-EGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
            G D   NY+  PD    + +     G+D   E  G   L   +  +   G I++ G +S
Sbjct: 203 LGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLS 262

Query: 184 QYNIEKPEGVHNLMQVVGKRICMEGFLAG 212
                  E    L+ ++ K   + G   G
Sbjct: 263 -----GFEAPVLLLPLLTKGATLRGIAVG 286

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 60.8 bits (148), Expect = 1e-10
 Identities = 53/219 (24%), Positives = 84/219 (38%), Gaps = 22/219 (10%)

Query: 52  VPLP-----YYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC 106
           V LP         +      TA   L      KKG+ V V+ A G VG    Q  K +G 
Sbjct: 130 VKLPDNVSDESAALAACVVGTAVHALK-RAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA 188

Query: 107 YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAV 166
            V+   RS EK+ +LK           K   D+          G D+  E VG   ++  
Sbjct: 189 RVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKLG------GADVVIELVGSPTIEES 242

Query: 167 LLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVM 226
           L ++   G + + G     N+           ++ K I + G ++          +E  +
Sbjct: 243 LRSLNKGGRLVLIG-----NVTPDPAPLRPGLLILKEIRIIGSISAT-----KADVEEAL 292

Query: 227 LAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV 265
             +KEGK+  V D    LE    AL  + +G+ VG+ ++
Sbjct: 293 KLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 60.2 bits (147), Expect = 1e-10
 Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 17/141 (12%)

Query: 52  VPLP-----YYTGILGMPGLTAYGGLHEL----CSPKKGEYVYVSAASGAVGQLVGQFVK 102
           VPLP         ILG  G TA   +H L     +P+ G  V V+ A+G VG +    + 
Sbjct: 110 VPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGP-VLVTGATGGVGSIAVAILA 168

Query: 103 LVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKE-EPDLDAALNR-CFPEGIDIYFENVGG 160
            +G  VV     +E+ D LK   G  +  + ++   +    L +  +   ID     VGG
Sbjct: 169 KLGYTVVALTGKEEQADYLKS-LGASEVLDREDLLDESKKPLLKARWAGAID----TVGG 223

Query: 161 KMLDAVLLNMRICGHIAVCGM 181
            +L  +L   +  G +A CG 
Sbjct: 224 DVLANLLKQTKYGGVVASCGN 244

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 55.7 bits (135), Expect = 5e-09
 Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 6/139 (4%)

Query: 66  LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
            T +  L +    K GE V +   +  +G    Q  K  G  V  +A S EK        
Sbjct: 125 FTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA-ACEAL 183

Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQY 185
           G D A NY+EE  ++        +G+D+  + VGG  L+  +  + + G I   G     
Sbjct: 184 GADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQG-- 241

Query: 186 NIEKPEGVHNLMQVVGKRI 204
                +   +L  ++ KR+
Sbjct: 242 ---GRKAELDLGPLLAKRL 257

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 47/205 (22%), Positives = 80/205 (39%), Gaps = 13/205 (6%)

Query: 66  LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
           LTA+  L E      G++V  +AA+ AVG+++ Q  KL+G   +   R  E+V+ LK   
Sbjct: 124 LTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK-AL 182

Query: 126 GFDDAFNYKEEPDLDAAL-NRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQ 184
           G D+  +     DL   +       G  +  + VGG+    +  ++R  G +   G++S 
Sbjct: 183 GADEVIDS-SPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSG 241

Query: 185 YNIEKPEGVHNLMQVVGKRICMEGFLAGDFYH-----QYPKFLELVMLAIKEGKLVYVED 239
             +            + K I + GF    + H        +    V+  ++ G L     
Sbjct: 242 EPV-----PFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVG 296

Query: 240 IAEGLEKAPSALVGIFTGQNVGKQL 264
               LE    A+         GK L
Sbjct: 297 AKFPLEDFEEAVAAAEQPGRGGKVL 321

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 2/123 (1%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           +   G TA G L +L +   G+ V V+AA+G +G L+ Q  K  G  VVG+A    K  L
Sbjct: 124 VVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL 182

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           +    G D A +Y      D         G+ +  + VGG +  A L  +   G     G
Sbjct: 183 V-RALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYG 241

Query: 181 MIS 183
             S
Sbjct: 242 WAS 244

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 53.3 bits (129), Expect = 2e-08
 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 10/116 (8%)

Query: 51  SVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVG 110
           ++P+ Y         LTAY  L +L   +KGE V + AA+G VGQ   Q  + +G  V  
Sbjct: 88  TLPVAY---------LTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFA 138

Query: 111 SARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCF-PEGIDIYFENVGGKMLDA 165
           +  S+EK + L+   G  D      +      + R     G+D+   ++ G++L A
Sbjct: 139 TVGSEEKREFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRA 194

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 4/118 (3%)

Query: 66  LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
            TA+G L      + G+ + +   + +VG    +  K +G  V  + RS E+  LLK   
Sbjct: 128 YTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKE-L 186

Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
           G D+     ++  +   L R  P G D   E VG   L   L ++R  G + + G++ 
Sbjct: 187 GADEVV--IDDGAIAEQL-RAAPGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLG 241

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 52.8 bits (128), Expect = 4e-08
 Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 10/80 (12%)

Query: 51  SVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVG 110
           +VP+ +         LTAY  L +L   + GE V + AA+G VGQ   Q  + +G  V  
Sbjct: 83  TVPVVF---------LTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGAEVFA 133

Query: 111 SARSKEKVDLLKHKFGFDDA 130
           +A S EK D L    G  D 
Sbjct: 134 TAGSPEKRDFL-RALGIPDD 152

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 9/120 (7%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
             TA   L        GE V V+ ASG VG  + Q  K  G  V+  A    K + ++  
Sbjct: 163 YSTAENMLER-AGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVA-GAAKEEAVR-A 219

Query: 125 FGFDDAFNYKEEPDL--DAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI 182
            G  D    ++ P L    AL     E +D+  + VGG +   +L  +R  G     G I
Sbjct: 220 LG-ADTVILRDAPLLADAKALG---GEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAI 275

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 3/117 (2%)

Query: 67  TAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKF 125
           TAY G  E  + + G  V V  A G +G L     KL+G   V+   RS E+++L K   
Sbjct: 155 TAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAG 213

Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG-GKMLDAVLLNMRICGHIAVCGM 181
           G D   N  E+      L      G D+  E VG    LD  L  +R  G + V G+
Sbjct: 214 GADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGV 270

Length = 350

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 8/154 (5%)

Query: 66  LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
           LTA G + E    +  + V  +AA+ A+G+++ +  K  G  V+   R KE+VDLLK K 
Sbjct: 130 LTALG-MLETAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KI 187

Query: 126 GFDDAFNYKEEPDLDAALNR-CFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQ 184
           G +   N   +PD    L          I+F+ VGG +   +LL M     + V G +S 
Sbjct: 188 GAEYVLN-SSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSG 246

Query: 185 YNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQY 218
                 E + + + ++ K   +EGF    +  + 
Sbjct: 247 KLD---EPI-DPVDLIFKNKSIEGFWLTTWLQKL 276

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 47.2 bits (113), Expect = 4e-06
 Identities = 52/199 (26%), Positives = 81/199 (40%), Gaps = 21/199 (10%)

Query: 55  PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS 114
                 L   G+T Y  L +  + K G++V V  A G +G +  Q+ K +G  V+   RS
Sbjct: 142 LAEAAPLLCAGITTYRALKKA-NVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRS 199

Query: 115 KEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICG 174
           +EK++L K K G D   N  +   L+A       E  D   + VG   L+  L  +R  G
Sbjct: 200 EEKLELAK-KLGADHVINSSDSDALEAV-----KEIADAIIDTVGPATLEPSLKALRRGG 253

Query: 175 HIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKL 234
            + + G+     I           ++ K I + G L G          E +  A  EGK+
Sbjct: 254 TLVLVGLPGGGPIPLL----PAFLLILKEISIVGSLVG----TRADLEEALDFA-AEGKI 304

Query: 235 VYVEDIAE--GLEKAPSAL 251
               +I E   L++   A 
Sbjct: 305 --KPEILETIPLDEINEAY 321

Length = 339

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 47.0 bits (112), Expect = 5e-06
 Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 4/113 (3%)

Query: 48  LDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY 107
           L  S+     + +LG  G TAYG L      + GE V V    G VG    Q  K  G  
Sbjct: 156 LPESLDY-TESAVLGCAGFTAYGALKHAADVRPGETVAVIGV-GGVGSSAIQLAKAFGAS 213

Query: 108 -VVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159
            ++      EK+   K + G     N  +E  + A        G+D+  E +G
Sbjct: 214 PIIAVDVRDEKLAKAK-ELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALG 265

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 11/123 (8%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           L + G+TA   L     P  G  V V+ ASG VG+   Q   L G +VV    S  + + 
Sbjct: 114 LPVAGVTALRALRRG-GPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEG 172

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           L+     +            +         +D+  ++VGG  L   L  +   G +   G
Sbjct: 173 LRELGAAEVV----VGGSELS------GAPVDLVVDSVGGPQLARALELLAPGGTVVSVG 222

Query: 181 MIS 183
             S
Sbjct: 223 SSS 225

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 40/193 (20%)

Query: 12  VLDSTHPNYKKDDLVWGLTSWE----------EFSLIQSPQLLIKILDTSVPLPYYTG-- 59
           V++S  P +K  D V  +TS++          E++ + +  +        VPLP   G  
Sbjct: 69  VVESNDPRFKPGDEVI-VTSYDLGVSHHGGYSEYARVPAEWV--------VPLP--KGLT 117

Query: 60  -----ILGMPGLTAYGGLHEL----CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVG 110
                ILG  G TA   +H L     +P++G  V V+ A+G VG L    +  +G  VV 
Sbjct: 118 LKEAMILGTAGFTAALSIHRLEENGLTPEQGP-VLVTGATGGVGSLAVSILAKLGYEVVA 176

Query: 111 SARSKEKVDLLKHKFGFDDAFNYKEE-PDLDAALNRCFPEG-IDIYFENVGGKMLDAVLL 168
           S    +  D LK K G  +    +E   +    L +    G +D     VGGK L  +L 
Sbjct: 177 STGKADAADYLK-KLGAKEVIPREELQEESIKPLEKQRWAGAVD----PVGGKTLAYLLS 231

Query: 169 NMRICGHIAVCGM 181
            ++  G +AV G+
Sbjct: 232 TLQYGGSVAVSGL 244

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 15/106 (14%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
            LT            KGE++ +  A+G  G +  Q  +L G  +  +A S +K++ L  +
Sbjct: 106 FLTVIDAFARA-GLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYL-KQ 163

Query: 125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNM 170
            G     NY EE D +  + R             GG+ +D V +N 
Sbjct: 164 LGVPHVINYVEE-DFEEEIMRL-----------TGGRGVDVV-INT 196

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 51/191 (26%), Positives = 78/191 (40%), Gaps = 37/191 (19%)

Query: 12  VLDSTHPNYKKDDLV----WGL--TSWEEFS-LIQSPQLLIKILDTSVPLP-----YYTG 59
           V+ S  P +++ D V    +GL  +    +S   + P       D  VPLP         
Sbjct: 68  VVSSEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPA------DWLVPLPEGLSLREAM 121

Query: 60  ILGMPGLTAYGGLHEL----CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK 115
            LG  G TA   +  L     +P+ G  V V+ A+G VG L    +  +G  VV S    
Sbjct: 122 ALGTAGFTAALSVMALERNGLTPEDGP-VLVTGATGGVGSLAVAILSKLGYEVVASTGKA 180

Query: 116 EKVDLLKHKFG-----FDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNM 170
           E+ D LK + G       +  +   +P L+      +   +D     VGG  L  VL  +
Sbjct: 181 EEEDYLK-ELGASEVIDREDLSPPGKP-LEKE---RWAGAVD----TVGGHTLANVLAQL 231

Query: 171 RICGHIAVCGM 181
           +  G +A CG+
Sbjct: 232 KYGGAVAACGL 242

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 44/173 (25%), Positives = 62/173 (35%), Gaps = 20/173 (11%)

Query: 6   GY-GVSKVLD--STHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILG 62
           GY  V +V++  S    +K  D V+      E  ++    LL+ + D    LP     L 
Sbjct: 25  GYSSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVV-PANLLVPLPD---GLPPERAALT 80

Query: 63  MPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLL 121
               TA  G+     P+ GE V V    G VG L  Q  K  G   VVG      + +L 
Sbjct: 81  ALAATALNGVR-DAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELA 138

Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICG 174
           +   G  D          D    R    G D+  E  G     A+   +R+  
Sbjct: 139 E-ALGPADP---VAADTADEIGGR----GADVVIEASGSP--SALETALRLLR 181

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 43.4 bits (103), Expect = 6e-05
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 6/96 (6%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
            +TAY  LH       G+ V +  ASG VGQ + +   L G  V G+A S+     L+  
Sbjct: 124 YVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTA-SERNHAALREL 182

Query: 125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG 160
                  +Y+ +  L A L    P G+D+ F+ VGG
Sbjct: 183 GAT--PIDYRTKDWLPAMLT---PGGVDVVFDGVGG 213

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 23/191 (12%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
            LT Y  +      K GE V V    G +G    Q  K +G  V+     +EK++L K +
Sbjct: 150 VLTPYHAVVRAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-E 207

Query: 125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK--MLDAVLLNMRICGHIAVCGMI 182
            G D+  N  ++   D         G D+ F+ VG +    DA    ++  G I V G+ 
Sbjct: 208 LGADEVLNSLDDSPKDKKAAG-LGGGFDVIFDFVGTQPTFEDAQKA-VKPGGRIVVVGLG 265

Query: 183 SQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKL------VY 236
                   +   +L  ++ + + + G   G      P+ L  V+  I +GKL        
Sbjct: 266 R------DKLTVDLSDLIARELRIIGSFGGT-----PEDLPEVLDLIAKGKLDPQVETRP 314

Query: 237 VEDIAEGLEKA 247
           +++I E LE+ 
Sbjct: 315 LDEIPEVLERL 325

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
           G+T Y  L +    K G++V +S A G +G L  Q+ K +G  V+      EK++L K +
Sbjct: 151 GVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-E 208

Query: 125 FGFDDAFNYKEEPDLDAALNRCFPEGID 152
            G D   ++K+  D++A        G  
Sbjct: 209 LGADAFVDFKKSDDVEAVKELTGGGGAH 236

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 41/177 (23%), Positives = 61/177 (34%), Gaps = 9/177 (5%)

Query: 59  GILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEK 117
            +LG    T  G +      + G+ V V    G VG    Q  K  G   ++    + EK
Sbjct: 164 CLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPEK 222

Query: 118 VDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIA 177
           ++L K KFG     N KE  D+  A+      G D  FE VG    + +   +       
Sbjct: 223 LELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNV--EVMRQALEATHRGG 279

Query: 178 VCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKL 234
              +I      +         V G+      F         P+ ++L M     GKL
Sbjct: 280 TSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYM----AGKL 332

Length = 366

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)

Query: 64  PGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH 123
            G+  Y  L +L   K G+ + +    GA   L  Q  +  G  V    RS E  +L + 
Sbjct: 152 AGIIGYRAL-KLAGLKPGQRLGLYGF-GASAHLALQIARYQGAEVFAFTRSGEHQELAR- 208

Query: 124 KFGFDDAFNYKEEPD--LDAAL 143
           + G D A +  + P   LDAA+
Sbjct: 209 ELGADWAGDSDDLPPEPLDAAI 230

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 43/201 (21%), Positives = 66/201 (32%), Gaps = 51/201 (25%)

Query: 26  VWGLT----SWEEFSLIQSPQLLIKILDTSVPLPYY-----TGILGMPGLTAYGGLHELC 76
           +WG      S+ +F+L+Q+ QL+        P P +          + G TAY  L    
Sbjct: 136 IWGYETNYGSFAQFALVQATQLM--------PKPKHLSWEEAAAYMLVGATAYRMLF--- 184

Query: 77  SP-----KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK--------- 122
                  K G+ V +  ASG +G +  Q  +  G   V    S+EK +  +         
Sbjct: 185 GWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVIN 244

Query: 123 -----HKFGFDDAFNYKEEPDLDAALNRCF----------PEGIDIYFENVGGKMLDAVL 167
                H     D  +         A  R F           E  DI FE+ G       +
Sbjct: 245 RRDFDHWGVLPDVNSEAYTAWTKEA--RRFGKAIWDILGGREDPDIVFEHPGRATFPTSV 302

Query: 168 LNMRICGHIAVCGMISQYNIE 188
                 G + +C   + YN  
Sbjct: 303 FVCDRGGMVVICAGTTGYNHT 323

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 26/204 (12%)

Query: 61  LGMPGLTAYGGLHEL-CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
           L +  LTAY  L      P  GE V V  ASG  G    Q  K++G  V+  +R     D
Sbjct: 144 LPVAALTAYHALKTAGLGP--GETVVVFGASGNTGIFAVQLAKMMGAEVIAVSRK----D 197

Query: 120 LLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVC 179
            LK +FG D+  +Y E  +    + +      D+   ++G    D  L  +   G +   
Sbjct: 198 WLK-EFGADEVVDYDEVEEKVKEITKMA----DVVINSLGSSFWDLSLSVLGRGGRLVTF 252

Query: 180 GMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKL-VYVE 238
           G ++   ++      +L  +  K+I + G   G       + LELV +A     L V V 
Sbjct: 253 GTLTGGEVKL-----DLSDLYSKQISIIGSTGG----TRKELLELVKIA---KDLKVKVW 300

Query: 239 DIAEGLEKAPSALVGIFTGQNVGK 262
              + LE+A  AL  +F+ +  G+
Sbjct: 301 KTFK-LEEAKEALKELFSKERDGR 323

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 71  GLH--ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF 127
            LH   L     G+ V V  A G +G L  Q++K++G   V+      EK+ + + + G 
Sbjct: 148 ALHAVRLAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGA 205

Query: 128 DDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159
           DD  N KEE D++         G D+  E  G
Sbjct: 206 DDTINPKEE-DVEKVRELTEGRGADLVIEAAG 236

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 39.9 bits (94), Expect = 8e-04
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 77  SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKE 135
              KG+ V +   S +VG L  Q  KL G  V+ +A S +  DL+K   G D  F+Y +
Sbjct: 151 PASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDYHD 207

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
           GLT Y  L +    K  E     AA+G VG +  Q+ K +G  ++G+  S +K    K  
Sbjct: 125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKA 184

Query: 125 FGFDDAFNYKEE 136
            G     NY+EE
Sbjct: 185 -GAWQVINYREE 195

Length = 327

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 47/202 (23%), Positives = 77/202 (38%), Gaps = 46/202 (22%)

Query: 79  KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPD 138
           KKGE V V+ A G VG    Q  K +G  V+    S+ K  ++     + D         
Sbjct: 161 KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSK---YAD--------- 208

Query: 139 LDAALNRCFPE------GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEG 192
               +   F E      G DI  E VG   L+  L ++ + G I   G +       P  
Sbjct: 209 -YVIVGSKFSEEVKKIGGADIVIETVGTPTLEESLRSLNMGGKIIQIGNV------DPSP 261

Query: 193 VHNLM--QVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKL-------VYVEDIAEG 243
            ++L    ++ K I + G ++        + +E  +  + EGK+       V + +I + 
Sbjct: 262 TYSLRLGYIILKDIEIIGHISAT-----KRDVEEALKLVAEGKIKPVIGAEVSLSEIDKA 316

Query: 244 LEKAPSALVGIFTGQNVGKQLV 265
           LE+             +GK LV
Sbjct: 317 LEELKDK-------SRIGKILV 331

Length = 334

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 9/100 (9%)

Query: 65  GLTAYGGLHELC----SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           GLTA+  L  +         G+ V +   SG VG    Q +K  G +V  +  S + + L
Sbjct: 143 GLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTC-STDAIPL 201

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG 160
           +K   G DD  +Y  E   D           D+  + VGG
Sbjct: 202 VK-SLGADDVIDYNNE---DFEEELTERGKFDVILDTVGG 237

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	270
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.98
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	99.98
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.98
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.98
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.98
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.98
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.98
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.97
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.97
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.97
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.97
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.97
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.97
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.97
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.97
PRK10083	339	putative oxidoreductase; Provisional	99.97
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.97
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.97
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.97
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.97
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.97
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	99.97
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.97
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.97
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.97
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.97
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.97
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.97
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.97
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.97
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	99.97
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.97
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.97
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.97
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.97
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.97
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	99.97
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.97
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.97
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.97
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.97
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.97
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.97
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.97
PLN02702	364	L-idonate 5-dehydrogenase	99.97
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.97
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.96
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.96
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.96
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.96
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.96
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.96
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.96
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.96
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.95
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.95
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.95
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.83
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.67
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.45
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.43
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.83
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.69
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.58
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.55
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.47
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.45
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	98.42
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.39
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.36
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.36
PLN02494	477	adenosylhomocysteinase	98.35
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.32
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.25
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.24
PRK05993	277	short chain dehydrogenase; Provisional	98.18
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.17
PRK12742	237	oxidoreductase; Provisional	98.16
PRK08324	681	short chain dehydrogenase; Validated	98.16
PRK06182	273	short chain dehydrogenase; Validated	98.14
PRK05693	274	short chain dehydrogenase; Provisional	98.14
PRK08265	261	short chain dehydrogenase; Provisional	98.12
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.1
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.04
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	98.0
PRK05872	296	short chain dehydrogenase; Provisional	98.0
PRK08339	263	short chain dehydrogenase; Provisional	97.99
PRK07109	334	short chain dehydrogenase; Provisional	97.99
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.95
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.92
PRK06057	255	short chain dehydrogenase; Provisional	97.92
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.91
PRK07825	273	short chain dehydrogenase; Provisional	97.89
PRK06139	330	short chain dehydrogenase; Provisional	97.89
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.89
PRK07060	245	short chain dehydrogenase; Provisional	97.88
PRK06484	520	short chain dehydrogenase; Validated	97.86
PRK06198	260	short chain dehydrogenase; Provisional	97.86
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.86
PRK12829	264	short chain dehydrogenase; Provisional	97.86
PLN03209	576	translocon at the inner envelope of chloroplast su	97.85
PRK12939	250	short chain dehydrogenase; Provisional	97.85
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.84
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.82
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.82
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.81
PLN02780	320	ketoreductase/ oxidoreductase	97.81
PRK07806	248	short chain dehydrogenase; Provisional	97.8
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.78
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.77
PRK07576	264	short chain dehydrogenase; Provisional	97.77
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.76
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.76
PRK06500	249	short chain dehydrogenase; Provisional	97.75
PRK07062	265	short chain dehydrogenase; Provisional	97.75
PRK07814	263	short chain dehydrogenase; Provisional	97.73
PRK05867	253	short chain dehydrogenase; Provisional	97.73
PRK06180	277	short chain dehydrogenase; Provisional	97.73
PRK08017	256	oxidoreductase; Provisional	97.72
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.71
PRK05854	313	short chain dehydrogenase; Provisional	97.71
PRK07063	260	short chain dehydrogenase; Provisional	97.71
PRK06196	315	oxidoreductase; Provisional	97.71
PRK05884	223	short chain dehydrogenase; Provisional	97.7
PRK06949	258	short chain dehydrogenase; Provisional	97.7
PRK05866	293	short chain dehydrogenase; Provisional	97.7
PRK07478	254	short chain dehydrogenase; Provisional	97.69
PRK07890	258	short chain dehydrogenase; Provisional	97.67
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.67
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.66
PRK10538	248	malonic semialdehyde reductase; Provisional	97.66
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.66
PRK07831	262	short chain dehydrogenase; Provisional	97.65
PRK08177	225	short chain dehydrogenase; Provisional	97.64
PRK05717	255	oxidoreductase; Validated	97.63
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.63
PRK05876	275	short chain dehydrogenase; Provisional	97.62
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.62
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.61
PRK07832	272	short chain dehydrogenase; Provisional	97.61
PRK07024	257	short chain dehydrogenase; Provisional	97.61
PRK09186	256	flagellin modification protein A; Provisional	97.61
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.61
PRK06841	255	short chain dehydrogenase; Provisional	97.6
PRK07326	237	short chain dehydrogenase; Provisional	97.6
PRK06128	300	oxidoreductase; Provisional	97.6
PRK06484	520	short chain dehydrogenase; Validated	97.59
PRK06194	287	hypothetical protein; Provisional	97.59
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.59
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.59
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.58
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.58
PRK07677	252	short chain dehydrogenase; Provisional	97.57
PLN02253	280	xanthoxin dehydrogenase	97.57
PRK12828	239	short chain dehydrogenase; Provisional	97.57
PRK07904	253	short chain dehydrogenase; Provisional	97.56
PRK08267	260	short chain dehydrogenase; Provisional	97.56
PRK06197	306	short chain dehydrogenase; Provisional	97.56
PRK06482	276	short chain dehydrogenase; Provisional	97.55
PRK06953	222	short chain dehydrogenase; Provisional	97.53
PRK07067	257	sorbitol dehydrogenase; Provisional	97.53
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.53
PRK09242	257	tropinone reductase; Provisional	97.53
PRK08643	256	acetoin reductase; Validated	97.53
PRK06720	169	hypothetical protein; Provisional	97.53
PRK08862	227	short chain dehydrogenase; Provisional	97.53
PRK09072	263	short chain dehydrogenase; Provisional	97.52
PRK06483	236	dihydromonapterin reductase; Provisional	97.52
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.51
PRK07774	250	short chain dehydrogenase; Provisional	97.51
PRK08589	272	short chain dehydrogenase; Validated	97.51
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.51
PRK06914	280	short chain dehydrogenase; Provisional	97.51
PRK06181	263	short chain dehydrogenase; Provisional	97.51
PRK08251	248	short chain dehydrogenase; Provisional	97.5
PRK08263	275	short chain dehydrogenase; Provisional	97.49
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.49
PRK08703	239	short chain dehydrogenase; Provisional	97.49
PRK06138	252	short chain dehydrogenase; Provisional	97.48
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.47
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.47
PRK09291	257	short chain dehydrogenase; Provisional	97.47
PRK06179	270	short chain dehydrogenase; Provisional	97.46
PRK06125	259	short chain dehydrogenase; Provisional	97.46
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.45
PRK06172	253	short chain dehydrogenase; Provisional	97.45
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.44
PRK07454	241	short chain dehydrogenase; Provisional	97.44
PRK07035	252	short chain dehydrogenase; Provisional	97.44
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.43
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.42
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.42
PRK07074	257	short chain dehydrogenase; Provisional	97.42
PRK08309	177	short chain dehydrogenase; Provisional	97.41
PRK12937	245	short chain dehydrogenase; Provisional	97.41
PRK07985	294	oxidoreductase; Provisional	97.41
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	97.41
PRK05875	276	short chain dehydrogenase; Provisional	97.41
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.4
PRK08628	258	short chain dehydrogenase; Provisional	97.39
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	97.38
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.38
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	97.38
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.37
COG4122	219	Predicted O-methyltransferase [General function pr	97.37
PRK12367	245	short chain dehydrogenase; Provisional	97.36
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.36
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.36
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.35
CHL00194	317	ycf39 Ycf39; Provisional	97.35
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	97.35
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.34
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	97.34
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.34
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.33
PRK07791	286	short chain dehydrogenase; Provisional	97.33
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.33
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	97.32
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	97.32
KOG0725	270	consensus Reductases with broad range of substrate	97.31
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	97.31
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.31
PRK07097	265	gluconate 5-dehydrogenase; Provisional	97.31
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.3
PRK06114	254	short chain dehydrogenase; Provisional	97.29
PRK12747	252	short chain dehydrogenase; Provisional	97.29
PRK07856	252	short chain dehydrogenase; Provisional	97.28
PRK06101	240	short chain dehydrogenase; Provisional	97.28
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	97.27
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.27
PRK06701	290	short chain dehydrogenase; Provisional	97.25
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	97.25
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	97.24
PRK05650	270	short chain dehydrogenase; Provisional	97.22
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	97.22
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.22
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.21
PLN02476	278	O-methyltransferase	97.21
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	97.21
PRK08226	263	short chain dehydrogenase; Provisional	97.2
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.2
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.2
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	97.19
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	97.18
PRK06398	258	aldose dehydrogenase; Validated	97.18
PRK05599	246	hypothetical protein; Provisional	97.18
PRK07069	251	short chain dehydrogenase; Validated	97.17
PRK12743	256	oxidoreductase; Provisional	97.17
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.17
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.16
PRK09135	249	pteridine reductase; Provisional	97.15
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.15
PRK06940	275	short chain dehydrogenase; Provisional	97.14
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.14
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.14
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	97.13
PRK08303	305	short chain dehydrogenase; Provisional	97.12
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	97.12
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.12
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	97.11
PRK07775	274	short chain dehydrogenase; Provisional	97.11
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.1
PRK07577	234	short chain dehydrogenase; Provisional	97.09
PRK08278	273	short chain dehydrogenase; Provisional	97.08
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	97.08
PRK05855	582	short chain dehydrogenase; Validated	97.07
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	97.07
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	97.07
PRK08264	238	short chain dehydrogenase; Validated	97.07
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	97.06
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.06
PLN00015	308	protochlorophyllide reductase	97.05
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	97.05
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	97.05
KOG1208	314	consensus Dehydrogenases with different specificit	97.04
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.03
PRK07201	657	short chain dehydrogenase; Provisional	97.03
PRK06523	260	short chain dehydrogenase; Provisional	97.03
PRK09134	258	short chain dehydrogenase; Provisional	97.02
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	97.01
PRK07102	243	short chain dehydrogenase; Provisional	97.01
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	97.0
PLN02589	247	caffeoyl-CoA O-methyltransferase	97.0
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.99
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.99
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.97
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.97
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	96.95
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.95
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.95
PRK12746	254	short chain dehydrogenase; Provisional	96.93
TIGR00438	188	rrmJ cell division protein FtsJ.	96.93
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.91
COG2910	211	Putative NADH-flavin reductase [General function p	96.89
PLN02366	308	spermidine synthase	96.88
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.87
PRK00811	283	spermidine synthase; Provisional	96.87
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.86
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	96.86
PRK11207	197	tellurite resistance protein TehB; Provisional	96.85
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.85
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.85
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	96.84
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.84
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.84
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.83
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.83
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.82
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	96.8
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.79
PRK07041	230	short chain dehydrogenase; Provisional	96.79
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.79
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.79
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	96.77
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.76
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.75
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	96.74
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.74
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.73
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.73
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	96.73
PRK04148	134	hypothetical protein; Provisional	96.72
PRK13243	333	glyoxylate reductase; Reviewed	96.71
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.71
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.7
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.7
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.69
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.68
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	96.67
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	96.66
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.66
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	96.66
PRK12744	257	short chain dehydrogenase; Provisional	96.66
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.66
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.65
PLN03139	386	formate dehydrogenase; Provisional	96.65
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	96.64
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.63
PRK06123	248	short chain dehydrogenase; Provisional	96.63
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.62
PRK08618	325	ornithine cyclodeaminase; Validated	96.6
PRK12827	249	short chain dehydrogenase; Provisional	96.6
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	96.59
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.58
PLN02244	340	tocopherol O-methyltransferase	96.58
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	96.57
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.57
PRK07023	243	short chain dehydrogenase; Provisional	96.57
PLN00203	519	glutamyl-tRNA reductase	96.55
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.55
PRK07402	196	precorrin-6B methylase; Provisional	96.53
PRK12824	245	acetoacetyl-CoA reductase; Provisional	96.52
PRK07578	199	short chain dehydrogenase; Provisional	96.52
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.52
PLN02928	347	oxidoreductase family protein	96.5
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	96.5
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.49
PRK14982	340	acyl-ACP reductase; Provisional	96.49
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	96.49
PRK08219	227	short chain dehydrogenase; Provisional	96.49
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	96.48
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	96.48
PRK08655	437	prephenate dehydrogenase; Provisional	96.47
PRK06924	251	short chain dehydrogenase; Provisional	96.47
PRK04457	262	spermidine synthase; Provisional	96.46
PRK01581	374	speE spermidine synthase; Validated	96.45
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.44
PRK13255	218	thiopurine S-methyltransferase; Reviewed	96.42
PLN02896	353	cinnamyl-alcohol dehydrogenase	96.4
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.38
PRK08300	302	acetaldehyde dehydrogenase; Validated	96.38
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	96.38
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	96.36
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.33
PLN02686	367	cinnamoyl-CoA reductase	96.33
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	96.32
PRK07574	385	formate dehydrogenase; Provisional	96.31
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.29
PLN00016	378	RNA-binding protein; Provisional	96.28
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.26
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	96.26
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.25
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.24
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.24
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	96.23
PLN03075	296	nicotianamine synthase; Provisional	96.21
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	96.19
COG1028	251	FabG Dehydrogenases with different specificities (	96.18
PRK07340	304	ornithine cyclodeaminase; Validated	96.16
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	96.16
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.16
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.15
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	96.15
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.14
PRK08317	241	hypothetical protein; Provisional	96.12
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	96.11
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	96.08
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	96.08
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	96.07
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	96.03
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.0
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	95.99
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.97
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	95.95
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.95
PLN02650	351	dihydroflavonol-4-reductase	95.94
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.93
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.93
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.92
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.91
PRK14967	223	putative methyltransferase; Provisional	95.89
PRK10258	251	biotin biosynthesis protein BioC; Provisional	95.88
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.86
PLN02653	340	GDP-mannose 4,6-dehydratase	95.83
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	95.82
PRK00536	262	speE spermidine synthase; Provisional	95.8
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	95.79
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	95.78
PF13847	152	Methyltransf_31: Methyltransferase domain; PDB: 3T	95.78
PLN02214	342	cinnamoyl-CoA reductase	95.76
PLN02233	261	ubiquinone biosynthesis methyltransferase	95.76
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	95.76
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.75
PRK14968	188	putative methyltransferase; Provisional	95.75
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	95.74
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.74
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	95.71
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	95.71
PRK05562	223	precorrin-2 dehydrogenase; Provisional	95.7
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.68
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.67

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=2.3e-44  Score=297.06  Aligned_cols=254  Identities=29%  Similarity=0.431  Sum_probs=222.0

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhc
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELC   76 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~   76 (270)
                      .+++|+|+++|++|++|++||+|+++      |+|+||+.++++. ++++ |++  +++ ++|++++.++|||++++...
T Consensus        63 ~d~aG~V~avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~-~~~~-P~~--ls~~eAAal~~~~~TA~~~l~~~~  138 (326)
T COG0604          63 SEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADW-LVPL-PDG--LSFEEAAALPLAGLTAWLALFDRA  138 (326)
T ss_pred             ceeEEEEEEeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHH-ceeC-CCC--CCHHHHHHHHHHHHHHHHHHHHhc
Confidence            56678888899999999999999886      7999999999999 9999 999  666 59999999999999999999


Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEE
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYF  155 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~  155 (270)
                      ++++|++|||+||+|++|++++|+|+.+|+.+++++.++++.+.++ ++|++++++|++. ++.+++++.+++ ++|+|+
T Consensus       139 ~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~  216 (326)
T COG0604         139 GLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVL  216 (326)
T ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEE
Confidence            9999999999999999999999999999988777777888888887 9999999999998 899999999998 999999


Q ss_pred             eCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHHCCce
Q 042426          156 ENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       156 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~  234 (270)
                      |++|+..+..++++|+++|+++.+|..+.    ......+...++.+.+...+...... ++...+.++++.+++++|.+
T Consensus       217 D~vG~~~~~~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l  292 (326)
T COG0604         217 DTVGGDTFAASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKL  292 (326)
T ss_pred             ECCCHHHHHHHHHHhccCCEEEEEecCCC----CCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999763    12233446667777887777776532 24556788999999999999


Q ss_pred             eeeeeeecCcccHHHHHHHHhc-CCccceEEEEe
Q 042426          235 VYVEDIAEGLEKAPSALVGIFT-GQNVGKQLVAV  267 (270)
Q Consensus       235 ~~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vv~~  267 (270)
                      ++.++.+||+++..++..+... ++..||+|+++
T Consensus       293 ~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         293 KPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             cceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            9999999999996666555444 48999999974

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=2.5e-44  Score=290.18  Aligned_cols=247  Identities=24%  Similarity=0.327  Sum_probs=221.6

Q ss_pred             CCCcccceEEE---EeecCCCCCCCCCEEEe----------------------------c---ccceeeEeecCCcccee
Q 042426            1 MQPLSGYGVSK---VLDSTHPNYKKDDLVWG----------------------------L---TSWEEFSLIQSPQLLIK   46 (270)
Q Consensus         1 ~~~i~g~g~v~---~vG~~v~~~~~Gd~V~~----------------------------~---g~~~~~~~v~~~~~~~~   46 (270)
                      +|.|+|+++|+   ++|++|++|++||||-.                            +   |+|+||+++++++ +++
T Consensus        57 ~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~-~~~  135 (339)
T COG1064          57 LPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARY-VVK  135 (339)
T ss_pred             CCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHH-eEE
Confidence            47788887665   58999999999999932                            1   8999999999999 999


Q ss_pred             ccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 042426           47 ILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF  125 (270)
Q Consensus        47 ~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~  125 (270)
                      + |++  ++. ++|.+.|++.|.|++|. ..+++||++|+|+|+ |++|++++|+|+.+|++|+++++++++.+.++ ++
T Consensus       136 i-P~~--~d~~~aApllCaGiT~y~alk-~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~l  209 (339)
T COG1064         136 I-PEG--LDLAEAAPLLCAGITTYRALK-KANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KL  209 (339)
T ss_pred             C-CCC--CChhhhhhhhcCeeeEeeehh-hcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-Hh
Confidence            9 999  555 59999999999999995 599999999999998 79999999999999999999999999999999 99


Q ss_pred             CCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcce
Q 042426          126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRIC  205 (270)
Q Consensus       126 g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  205 (270)
                      |++++++.++. +..+.+++.    +|+++|+++...++.++++|+++|+++.+|.+..    .+....+...+..++++
T Consensus       210 GAd~~i~~~~~-~~~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~~~  280 (339)
T COG1064         210 GADHVINSSDS-DALEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEIS  280 (339)
T ss_pred             CCcEEEEcCCc-hhhHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcCeE
Confidence            99999998865 777777764    9999999997799999999999999999999641    23344667888999999


Q ss_pred             eeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426          206 MEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      +.|+..++     +.++++++++..+|+++|.+.+.++++++++|+++|.+++..|++|+++.
T Consensus       281 i~GS~~g~-----~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         281 IVGSLVGT-----RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             EEEEecCC-----HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            99999987     68899999999999999999889999999999999999999999999875

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=5.9e-44  Score=270.12  Aligned_cols=258  Identities=24%  Similarity=0.289  Sum_probs=226.7

Q ss_pred             CCcccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426            2 QPLSGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS   77 (270)
Q Consensus         2 ~~i~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~   77 (270)
                      |=+|++|+|+.||++|++|++||||+..   |.|+|+..+|... ++++ |+.  +++ ++|++...++|||..+++..+
T Consensus        68 pGmEaaGvVvAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~k-v~~v-pe~--i~~k~aaa~llq~lTAy~ll~e~y~  143 (336)
T KOG1197|consen   68 PGMEAAGVVVAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVK-VFKV-PEA--ITLKEAAALLLQGLTAYMLLFEAYN  143 (336)
T ss_pred             CCcccceEEEEecCCccccccccEEEEeccchhhheecccccee-eccC-Ccc--cCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3378899999999999999999999876   8999999999999 9999 998  555 588888999999999999999


Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEe
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFE  156 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d  156 (270)
                      +++|++||+|.|+||+|+++.|+++..|+.++.++++.++++.++ +.|++|.|+++.+ |+.+++.+.++| |+|+++|
T Consensus       144 vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vyD  221 (336)
T KOG1197|consen  144 VKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVYD  221 (336)
T ss_pred             CCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-hcCCcceeeccch-hHHHHHHhccCCCCceeeec
Confidence            999999999999999999999999999999999999999999999 9999999999998 999999999988 9999999


Q ss_pred             CCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc---ccchHHHHHHHHHHHHCCc
Q 042426          157 NVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF---YHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       157 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~  233 (270)
                      .+|.+.+..++.+|++.|.+|.+|+.+.     ..+++++..+--+++.+..-.+-.+   +........+++.++.+|.
T Consensus       222 svG~dt~~~sl~~Lk~~G~mVSfG~asg-----l~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~  296 (336)
T KOG1197|consen  222 SVGKDTFAKSLAALKPMGKMVSFGNASG-----LIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGH  296 (336)
T ss_pred             cccchhhHHHHHHhccCceEEEeccccC-----CCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCc
Confidence            9999999999999999999999999764     3344545555555555543333222   2233345678889999999


Q ss_pred             eeeeeeeecCcccHHHHHHHHhcCCccceEEEEecCC
Q 042426          234 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE  270 (270)
Q Consensus       234 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  270 (270)
                      +++.++++||++++.+|+++++++.+.||+++...+|
T Consensus       297 lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~  333 (336)
T KOG1197|consen  297 LKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPE  333 (336)
T ss_pred             cceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence            9999999999999999999999999999999987664

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-42  Score=287.16  Aligned_cols=264  Identities=64%  Similarity=1.107  Sum_probs=220.7

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEecccceeeEeecCC--ccce--eccCCCCCccccccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSP--QLLI--KILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~--~~~~--~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      +|+|+|..+|+++++|++||+|+++|+|+||.+++++  . ++  ++ |++++.+.++|+++++++|||+++...+++++
T Consensus        81 ~~~G~v~~vg~~v~~~~~Gd~V~~~~~~aey~~v~~~~~~-~~~~~~-P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~  158 (348)
T PLN03154         81 EGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQ-LRKIQL-QDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKK  158 (348)
T ss_pred             EeeEEEEEEecCCCCCCCCCEEEecCCcEEEEEEeccccc-eEEccC-cCCCCHHHHHHHcccHHHHHHHHHHHhcCCCC
Confidence            5688999999999999999999999999999999874  3 43  44 77744332478999999999999988889999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      |++|||+|++|++|++++|+|+.+|++|+++++++++.+.+++++|+++++++++..++.+.+.+.+++++|++|||+|+
T Consensus       159 g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~  238 (348)
T PLN03154        159 GDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGG  238 (348)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCH
Confidence            99999999999999999999999999999999999999988757999999998752267777877766689999999999


Q ss_pred             chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeee
Q 042426          161 KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI  240 (270)
Q Consensus       161 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  240 (270)
                      ..+..++++++++|+++.+|.........+....+...++.+++++.|+....+.....+.++++.+++++|++++.+..
T Consensus       239 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~  318 (348)
T PLN03154        239 DMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDM  318 (348)
T ss_pred             HHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceec
Confidence            89999999999999999999754321111111234566778889998887654433345678899999999999998888


Q ss_pred             ecCcccHHHHHHHHhcCCccceEEEEecCC
Q 042426          241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE  270 (270)
Q Consensus       241 ~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  270 (270)
                      +|+++++++|++.+.+++..||+|+++++|
T Consensus       319 ~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~  348 (348)
T PLN03154        319 SEGLESAPAALVGLFSGKNVGKQVIRVAKE  348 (348)
T ss_pred             ccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence            999999999999999999999999999775

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=3.2e-41  Score=262.03  Aligned_cols=264  Identities=46%  Similarity=0.812  Sum_probs=239.2

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEecccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcE
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEY   83 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~   83 (270)
                      |.|..+...+-|+.+.|++||.|.+..+|+||.+++.+. +.|++|...+++.....|..++.|||.+|.+.++.++|++
T Consensus        75 ~~gg~V~~Vv~S~~~~f~~GD~V~~~~GWq~y~i~~~~~-l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~Get  153 (340)
T COG2130          75 MVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAISDGEG-LRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGET  153 (340)
T ss_pred             eECCeeEEEEecCCCCCCCCCEEEecccceEEEeechhh-ceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCE
Confidence            445444445678899999999999999999999999999 9999767767776689999999999999999999999999


Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcchH
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKML  163 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~  163 (270)
                      ++|.+|+|++|..+.|+||..|++|+.++.++++.+++++++|.|.++||+++ ++.+.+.+.+++|+|+.||++|++.+
T Consensus       154 vvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~  232 (340)
T COG2130         154 VVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVL  232 (340)
T ss_pred             EEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHH
Confidence            99999999999999999999999999999999999999977999999999998 99999999999999999999999999


Q ss_pred             HHHHHccccCCEEEEEccccccccc-CCCCccchHHHHhhcceeeeccc-cCcccchHHHHHHHHHHHHCCceeeeeeee
Q 042426          164 DAVLLNMRICGHIAVCGMISQYNIE-KPEGVHNLMQVVGKRICMEGFLA-GDFYHQYPKFLELVMLAIKEGKLVYVEDIA  241 (270)
Q Consensus       164 ~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  241 (270)
                      +..+.+|+..+|+..||..+.|+-. .+..+..+..++.+++++.|+-. .++..++.+..+++..++++|+++...+.+
T Consensus       233 DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~  312 (340)
T COG2130         233 DAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIV  312 (340)
T ss_pred             HHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeeh
Confidence            9999999999999999998887654 44456667778888999999998 455666779999999999999999998777


Q ss_pred             cCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          242 EGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       242 ~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      -+++++++||.-+.+++..||.|+++.+
T Consensus       313 dGlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         313 DGLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             hhhhccHHHHHHHhcCCccceEEEEecC
Confidence            7999999999999999999999999864

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=3.4e-39  Score=270.55  Aligned_cols=262  Identities=70%  Similarity=1.179  Sum_probs=216.5

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEecccceeeEeecC-CccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcE
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQS-PQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEY   83 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~   83 (270)
                      +|.|+++.+|+++++|++||+|+++|+|+||+++++ .. ++++||++++.+.++++++++++|||+++.+.+++++|++
T Consensus        76 ~g~~~~~~v~~~v~~~~vGd~V~~~g~~aey~~v~~~~~-~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~  154 (338)
T cd08295          76 TGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQD-LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGET  154 (338)
T ss_pred             eccEEEEEEecCCCCCCCCCEEEecCCceeEEEecchhc-eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCE
Confidence            346788889999999999999999999999999999 78 9999446644443588999999999999988889999999


Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcchH
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKML  163 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~  163 (270)
                      |+|+|++|++|++++|+|+.+|++|+++++++++.+.+++++|+++++++.+..++.+.+.+.+++++|++||++|+..+
T Consensus       155 VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~  234 (338)
T cd08295         155 VFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKML  234 (338)
T ss_pred             EEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHH
Confidence            99999999999999999999999999999999999999833999999987642267777877765689999999999899


Q ss_pred             HHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecC
Q 042426          164 DAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEG  243 (270)
Q Consensus       164 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  243 (270)
                      ..++++++++|+++.+|..............+...+..+++++.++..........+.++++.+++.+|++++.+...|+
T Consensus       235 ~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~  314 (338)
T cd08295         235 DAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADG  314 (338)
T ss_pred             HHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccC
Confidence            99999999999999998754321100001123455666777887765544333345678899999999999988777899


Q ss_pred             cccHHHHHHHHhcCCccceEEEEe
Q 042426          244 LEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       244 ~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ++++++|++.+++++..||+|+++
T Consensus       315 l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         315 LESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHHHHHHHHhcCCCCceEEEEC
Confidence            999999999999999999999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.2e-39  Score=250.45  Aligned_cols=250  Identities=20%  Similarity=0.257  Sum_probs=216.1

Q ss_pred             CCCcccce---EEEEeecCCCCCCCCCEEE------------------------------ec--------ccceeeEeec
Q 042426            1 MQPLSGYG---VSKVLDSTHPNYKKDDLVW------------------------------GL--------TSWEEFSLIQ   39 (270)
Q Consensus         1 ~~~i~g~g---~v~~vG~~v~~~~~Gd~V~------------------------------~~--------g~~~~~~~v~   39 (270)
                      .|.|+|++   +|++||++|++|++||+|=                              ++        |+|++|++++
T Consensus        65 ~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~  144 (360)
T KOG0023|consen   65 YPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVD  144 (360)
T ss_pred             CCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEe
Confidence            36777665   5566899999999999991                              00        6699999999


Q ss_pred             CCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 042426           40 SPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD  119 (270)
Q Consensus        40 ~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~  119 (270)
                      +.+ ++++ |+++|+. ++|.|.|++.|.|.+| ...++.||+++.|.|+ |++|.+++|+|+++|.+|++++++..+.+
T Consensus       145 ~~~-a~kI-P~~~pl~-~aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kke  219 (360)
T KOG0023|consen  145 EVF-AIKI-PENLPLA-SAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKE  219 (360)
T ss_pred             eee-EEEC-CCCCChh-hccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHH
Confidence            999 9999 9996666 6999999999999999 5678999999999998 66999999999999999999999985555


Q ss_pred             HHHHHhCCCceeecC-CchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHH
Q 042426          120 LLKHKFGFDDAFNYK-EEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQ  198 (270)
Q Consensus       120 ~~~~~~g~~~vi~~~-~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  198 (270)
                      .+-+.+|++..++.. ++ ++.+.+.+.+++++|-+.+. ....++.++.+++++|++|.+|.+..      ...++...
T Consensus       220 ea~~~LGAd~fv~~~~d~-d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~  291 (360)
T KOG0023|consen  220 EAIKSLGADVFVDSTEDP-DIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFP  291 (360)
T ss_pred             HHHHhcCcceeEEecCCH-HHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchh
Confidence            555489999888888 55 89999999887777777766 44688999999999999999999652      44566778


Q ss_pred             HHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          199 VVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      +..+.+++.|+..++     +...++++++..++.+++.+ +..+++++++|+++|.+++..+|.||+++.
T Consensus       292 lil~~~~I~GS~vG~-----~ket~E~Ldf~a~~~ik~~I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s~  356 (360)
T KOG0023|consen  292 LILGRKSIKGSIVGS-----RKETQEALDFVARGLIKSPI-ELVKLSEVNEAYERMEKGDVRYRFVVDVSK  356 (360)
T ss_pred             hhcccEEEEeecccc-----HHHHHHHHHHHHcCCCcCce-EEEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence            888999999999988     67889999999999999988 678999999999999999999999999864

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.4e-38  Score=246.02  Aligned_cols=246  Identities=20%  Similarity=0.226  Sum_probs=211.0

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe------------------------c-------ccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------L-------TSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------~-------g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      |.+|+|.|+|++|+++|+||||..                        +       |++++|++++++. |+|+ |++  
T Consensus        68 EssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~df-c~KL-Pd~--  143 (354)
T KOG0024|consen   68 ESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADF-CYKL-PDN--  143 (354)
T ss_pred             ccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHh-eeeC-CCC--
Confidence            456889999999999999999931                        1       8999999999999 9999 999  


Q ss_pred             ccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      .+++.++|..+++++|++. +++++++|+++||+|| |++|+.+...|+.+|+ +|+++.-.+.+++.++ ++|++.+.+
T Consensus       144 vs~eeGAl~ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~  220 (354)
T KOG0024|consen  144 VSFEEGALIEPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTDP  220 (354)
T ss_pred             Cchhhcccccchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEee
Confidence            7777889999999999999 6799999999999998 9999999999999999 9999999999999999 799987765


Q ss_pred             cCCc---hhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceee
Q 042426          133 YKEE---PDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICME  207 (270)
Q Consensus       133 ~~~~---~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (270)
                      ....   +++.+.+.+..++ .+|+.|||+|.. .++.++..++.+|+++..|+..      +...++......+++.+.
T Consensus       221 ~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~------~~~~fpi~~v~~kE~~~~  294 (354)
T KOG0024|consen  221 SSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGA------EEIQFPIIDVALKEVDLR  294 (354)
T ss_pred             ccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCC------CccccChhhhhhheeeee
Confidence            5553   1444555555554 799999999974 8899999999999999998854      445577788889999998


Q ss_pred             eccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCc-cceEEEEec
Q 042426          208 GFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQN-VGKQLVAVA  268 (270)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~~  268 (270)
                      |+....     ...++.+++++.+|++.  +.++..|++++..+||+.+++++. .-|+++..+
T Consensus       295 g~fry~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~  353 (354)
T KOG0024|consen  295 GSFRYC-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP  353 (354)
T ss_pred             eeeeec-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence            887644     45799999999999874  578899999999999999998874 458888764

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=4.7e-37  Score=256.80  Aligned_cols=262  Identities=43%  Similarity=0.757  Sum_probs=217.2

Q ss_pred             CCcccceEEEEeecCCCCCCCCCEEEecccceeeEeecCC---ccceeccCCCCCc--c--ccccccCchhhhHHHHhhh
Q 042426            2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSP---QLLIKILDTSVPL--P--YYTGILGMPGLTAYGGLHE   74 (270)
Q Consensus         2 ~~i~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~---~~~~~~~p~~~~~--~--~~~a~l~~~~~ta~~~l~~   74 (270)
                      |.+.|+++++.|-+.+++|++||+|+++++|++|++++++   . ++++ |++++.  .  ...++++.+++|||+++.+
T Consensus        60 p~v~G~e~~G~V~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~i-P~~~~~~~~~~~~~a~~~~~~~ta~~al~~  137 (329)
T cd08294          60 DTMIGTQVAKVIESKNSKFPVGTIVVASFGWRTHTVSDGKDQPD-LYKL-PADLPDDLPPSLALGVLGMPGLTAYFGLLE  137 (329)
T ss_pred             CcEecceEEEEEecCCCCCCCCCEEEeeCCeeeEEEECCccccc-eEEC-CccccccCChHHHHHhcccHHHHHHHHHHH
Confidence            4567787777777778899999999999999999999999   8 9999 998441  1  1245789999999999988


Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEE
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      .+++++|+++||+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++++. ++.+.+.+.+++++|++
T Consensus       138 ~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~v  215 (329)
T cd08294         138 ICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCY  215 (329)
T ss_pred             hcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEE
Confidence            899999999999999999999999999999999999999999999998 7999999999887 88888887776689999


Q ss_pred             EeCCCcchHHHHHHccccCCEEEEEcccccccccCCC-CccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCc
Q 042426          155 FENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPE-GVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       155 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  233 (270)
                      ||++|+..+..++++++++|+++.+|........... .......+..+++++.++..........+.++++.+++++|+
T Consensus       216 ld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~  295 (329)
T cd08294         216 FDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGK  295 (329)
T ss_pred             EECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCC
Confidence            9999999999999999999999999864321110000 122344566678888876554322334567889999999999


Q ss_pred             eeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          234 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       234 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +++.+..+++++++++|++.+.+++..||+|+++
T Consensus       296 i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         296 LKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             CcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            9987667899999999999999999999999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=100.00  E-value=2.2e-37  Score=239.85  Aligned_cols=268  Identities=72%  Similarity=1.226  Sum_probs=243.2

Q ss_pred             CcccceEEEEeecCCCCCCCCCEEEecccceeeEeecCCc-cceec-cCCCCCccccccccCchhhhHHHHhhhhcCCCC
Q 042426            3 PLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQ-LLIKI-LDTSVPLPYYTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         3 ~i~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~-~~~~~-~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      ||+|.|+...+.|..+++++||.|+++-+|.||.++++.. -.+++ -|...|++....++..+++|||..+++.+..++
T Consensus        74 pi~g~GV~kVi~S~~~~~~~GD~v~g~~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~  153 (343)
T KOG1196|consen   74 PIDGFGVAKVIDSGHPNYKKGDLVWGIVGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKK  153 (343)
T ss_pred             EecCCceEEEEecCCCCCCcCceEEEeccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCC
Confidence            6889899888999999999999999999999999998754 13443 024667776689999999999999999999999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      |++++|.||+|++|+.+.|+|+.+|++|+.++.|+++.+.++.++|.+..+||.++.+..+.+++..+.|+|+-||.+|+
T Consensus       154 geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG  233 (343)
T KOG1196|consen  154 GETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGG  233 (343)
T ss_pred             CCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCc
Confidence            99999999999999999999999999999999999999999989999999999987688999999888899999999999


Q ss_pred             chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeee
Q 042426          161 KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI  240 (270)
Q Consensus       161 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  240 (270)
                      ..++..+..|+..||++.+|..++++.+.+....+......|++++.|+-..++.+.+.+.++.+..++++|+++-..+.
T Consensus       234 ~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi  313 (343)
T KOG1196|consen  234 KMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI  313 (343)
T ss_pred             HHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH
Confidence            99999999999999999999999888777766677788888999999988888877788999999999999999988776


Q ss_pred             ecCcccHHHHHHHHhcCCccceEEEEecCC
Q 042426          241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE  270 (270)
Q Consensus       241 ~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  270 (270)
                      .-+++..+.|+..|.+++..||.++++..|
T Consensus       314 ~~Glen~P~A~vglf~GkNvGKqiv~va~E  343 (343)
T KOG1196|consen  314 ADGLENGPSALVGLFHGKNVGKQLVKVARE  343 (343)
T ss_pred             HHHHhccHHHHHHHhccCcccceEEEeecC
Confidence            779999999999999999999999999765

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=5e-37  Score=258.27  Aligned_cols=261  Identities=38%  Similarity=0.647  Sum_probs=208.7

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec-ccceeeEeecCCccceeccCCCCCc---cccccccCchhhhHHHHhhhhcCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL-TSWEEFSLIQSPQLLIKILDTSVPL---PYYTGILGMPGLTAYGGLHELCSPK   79 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~-g~~~~~~~v~~~~~~~~~~p~~~~~---~~~~a~l~~~~~ta~~~l~~~~~~~   79 (270)
                      .+++|+|.++|++|++|++||+|+++ ++|+||++++++. ++++ |++++.   ++.+++++.+++|||+++.+.++++
T Consensus        74 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ae~~~v~~~~-~~~i-P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~  151 (345)
T cd08293          74 LDGGGVGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSS-LEKV-DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHIT  151 (345)
T ss_pred             eEeeEEEEEeccCCCCCCCCCEEEecCCCceeEEEecHHH-eEEc-CccccccchhHHhhhcCcHHHHHHHHHHHhccCC
Confidence            46778888899999999999999988 6899999999999 9999 887322   2235678889999999998888888


Q ss_pred             CC--cEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           80 KG--EYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        80 ~g--~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      +|  ++|||+|++|++|++++|+|+.+|+ +|+++++++++.+.+++++|+++++++++. ++.+.+++.+++++|++||
T Consensus       152 ~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~~~~~i~~~~~~gvd~vid  230 (345)
T cd08293         152 PGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFD  230 (345)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHCCCCceEEEE
Confidence            77  9999999999999999999999999 899999999999999845999999998886 8888888877668999999


Q ss_pred             CCCcchHHHHHHccccCCEEEEEcccccccccCCC-Cccc--hHHH-HhhcceeeeccccCcccchHHHHHHHHHHHHCC
Q 042426          157 NVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPE-GVHN--LMQV-VGKRICMEGFLAGDFYHQYPKFLELVMLAIKEG  232 (270)
Q Consensus       157 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  232 (270)
                      |+|+..+..++++++++|+++.+|........... ....  .... ..+++++.++..........+.++++.+++.+|
T Consensus       231 ~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  310 (345)
T cd08293         231 NVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEG  310 (345)
T ss_pred             CCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCC
Confidence            99998889999999999999999854321000000 0111  1111 234444444433222233456788899999999


Q ss_pred             ceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          233 KLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       233 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      .+++.....++++++++|++.+.+++..||+|+++
T Consensus       311 ~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         311 KLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             CccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            99887666779999999999999999899999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.6e-36  Score=253.19  Aligned_cols=261  Identities=42%  Similarity=0.695  Sum_probs=208.6

Q ss_pred             CCcccceEEEEeecCCCCCCCCCEEEecccceeeEeecCCccceecc---CCCCCcccc-c-cccCchhhhHHHHhhhhc
Q 042426            2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKIL---DTSVPLPYY-T-GILGMPGLTAYGGLHELC   76 (270)
Q Consensus         2 ~~i~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~---p~~~~~~~~-~-a~l~~~~~ta~~~l~~~~   76 (270)
                      |.|+|.+.+++|-+..+.|++||+|+++++|++|++++.+. +.+++   |++  ++++ + ++++++++|||+++.+.+
T Consensus        58 ~~i~G~~~~g~v~~~~~~~~~GdrV~~~~~~~~~~~~~~~~-~~~l~~~~p~~--~~~~~aaa~l~~~~~TA~~~l~~~~  134 (325)
T TIGR02825        58 DTMMGQQVARVVESKNVALPKGTIVLASPGWTSHSISDGKD-LEKLLTEWPDT--LPLSLALGTVGMPGLTAYFGLLEIC  134 (325)
T ss_pred             CcEecceEEEEEEeCCCCCCCCCEEEEecCceeeEEechhh-eEEccccccCC--CCHHHHHHhcccHHHHHHHHHHHHh
Confidence            34667666666555556799999999998999999999888 76661   555  4543 4 679999999999998889


Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      ++++|++|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++..++.+.+....++++|++||
T Consensus       135 ~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d  213 (325)
T TIGR02825       135 GVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFD  213 (325)
T ss_pred             CCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEE
Confidence            9999999999999999999999999999999999999999999998 899999999876425666666665558999999


Q ss_pred             CCCcchHHHHHHccccCCEEEEEcccccccccCCC-CccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHHCCce
Q 042426          157 NVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPE-GVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       157 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~  234 (270)
                      |+|+..+..++++++++|+++.+|........... .......+..+++++.++....+ .....+.++++.+++.+|++
T Consensus       214 ~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  293 (325)
T TIGR02825       214 NVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKI  293 (325)
T ss_pred             CCCHHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCc
Confidence            99998889999999999999999875421100011 11123445667777777665332 22234678899999999999


Q ss_pred             eeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      ++.+..+|+++++++|++.+.+++..||+|++
T Consensus       294 ~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       294 QYKEYVIEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             ccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence            98877889999999999999999999999974

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1.7e-36  Score=256.99  Aligned_cols=248  Identities=17%  Similarity=0.237  Sum_probs=211.7

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE   33 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~   33 (270)
                      +++|+|.++|+++++|++||+|++.                                                   |+|+
T Consensus        68 E~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~a  147 (371)
T cd08281          68 EAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFA  147 (371)
T ss_pred             cceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccce
Confidence            4568888899999999999999751                                                   5899


Q ss_pred             eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGS  111 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~  111 (270)
                      ||+.+++++ ++++ |++  +++ +++.++++++|||.++...+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++
T Consensus       148 ey~~v~~~~-~~~l-P~~--l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~  222 (371)
T cd08281         148 EYAVVSRRS-VVKI-DKD--VPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAV  222 (371)
T ss_pred             eeEEecccc-eEEC-CCC--CChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEE
Confidence            999999999 9999 999  555 478888899999999877889999999999986 9999999999999999 69999


Q ss_pred             eCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCC
Q 042426          112 ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKP  190 (270)
Q Consensus       112 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  190 (270)
                      ++++++++.++ ++|+++++++.+. ++.+.+++.+++++|++|||+|. ..+..++++++++|+++.+|.....    .
T Consensus       223 ~~~~~r~~~a~-~~Ga~~~i~~~~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~  296 (371)
T cd08281         223 DLNEDKLALAR-ELGATATVNAGDP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----A  296 (371)
T ss_pred             cCCHHHHHHHH-HcCCceEeCCCch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----c
Confidence            99999999998 9999999998876 88888888776689999999987 5889999999999999999875321    1


Q ss_pred             CCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          191 EGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      ...++...++.+++++.++....+.  ..+.++++++++.+|++++  .++++|+++|+++|++.+.+++..+|+|+
T Consensus       297 ~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         297 RLSVPALSLVAEERTLKGSYMGSCV--PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             eeeecHHHHhhcCCEEEEEecCCCC--hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            2235566778899999998765432  2456888999999999975  57789999999999999999998888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=5.5e-37  Score=242.85  Aligned_cols=249  Identities=23%  Similarity=0.280  Sum_probs=215.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe---------------------------------------------------cccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG---------------------------------------------------LTSWE   33 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~---------------------------------------------------~g~~~   33 (270)
                      ||+|+|++||++|+++++||+|+.                                                   .++|+
T Consensus        62 EgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa  141 (366)
T COG1062          62 EGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFA  141 (366)
T ss_pred             ccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccch
Confidence            688999999999999999999931                                                   14899


Q ss_pred             eeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEe
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSA  112 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~  112 (270)
                      ||.++++.. ++|+ ++..|+. .+|.+.|...|.+.+..+.+++++|+++.|.|. |++|++++|-|+..|+ +|++++
T Consensus       142 ~y~vv~~~s-~vki-~~~~p~~-~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD  217 (366)
T COG1062         142 EYTVVHEIS-LVKI-DPDAPLE-KACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVD  217 (366)
T ss_pred             hheeecccc-eEEC-CCCCCcc-ceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEe
Confidence            999999999 9999 6663444 589999999999999989999999999999997 9999999999999999 999999


Q ss_pred             CCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCC
Q 042426          113 RSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPE  191 (270)
Q Consensus       113 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~  191 (270)
                      ..+++++.++ +||+++.+|.++..++.+.+++.+++|+|++|||+|+ ..+++++.++.++|+.+.+|..+.    ...
T Consensus       218 ~~~~Kl~~A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~----~~~  292 (366)
T COG1062         218 INPEKLELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGA----GQE  292 (366)
T ss_pred             CCHHHHHHHH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCC----Cce
Confidence            9999999999 9999999999876359999999999899999999998 589999999999999999998653    233


Q ss_pred             CccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          192 GVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      .+.+...++.. .+++|+..+..  ..+.++.+++++..+|++..  .++..++++|+++||++|.+++.. |-||+
T Consensus       293 i~~~~~~lv~g-r~~~Gs~~G~~--~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         293 ISTRPFQLVTG-RVWKGSAFGGA--RPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             eecChHHeecc-ceEEEEeecCC--ccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence            33555555555 78888888765  23567999999999999865  677899999999999999999866 55554

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=6.3e-36  Score=250.98  Aligned_cols=242  Identities=21%  Similarity=0.234  Sum_probs=205.7

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|.++|++|+.|++||+|+.                               .|+|+||+.+++++ ++++ |++  
T Consensus        61 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~-~~~~-P~~--  136 (339)
T cd08239          61 EPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKT-LIPL-PDD--  136 (339)
T ss_pred             CceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHH-eEEC-CCC--
Confidence            467888899999999999999974                               27899999999999 9999 998  


Q ss_pred             ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCcee
Q 042426           54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAF  131 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi  131 (270)
                      +++ ++++++++++|||+++. ..++++|++|+|+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|+++++
T Consensus       137 ~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i  213 (339)
T cd08239         137 LSFADGALLLCGIGTAYHALR-RVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVI  213 (339)
T ss_pred             CCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEE
Confidence            555 48888999999999994 577899999999986 99999999999999997 999999999999998 99999999


Q ss_pred             ecCCchhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426          132 NYKEEPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF  209 (270)
Q Consensus       132 ~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (270)
                      ++++. + .+.+.+.+++ ++|++|||+|+. .+..++++++++|+++.+|.....    +  ......++.+++++.++
T Consensus       214 ~~~~~-~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~--~~~~~~~~~~~~~i~g~  285 (339)
T cd08239         214 NSGQD-D-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL----T--IEVSNDLIRKQRTLIGS  285 (339)
T ss_pred             cCCcc-h-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc----c--cCcHHHHHhCCCEEEEE
Confidence            98876 6 6777777766 899999999986 558899999999999999875421    1  11134567788999887


Q ss_pred             cccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          210 LAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +...     .+.++++++++.+|++.+  .++++|+++++++|++.+.++. .||+|+++
T Consensus       286 ~~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         286 WYFS-----VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             ecCC-----HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            7644     467899999999999864  6778999999999999998876 69999975

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=1.2e-35  Score=250.75  Aligned_cols=248  Identities=19%  Similarity=0.270  Sum_probs=209.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-------------------------------------------cccceeeEeecCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------------------LTSWEEFSLIQSP   41 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------------------~g~~~~~~~v~~~   41 (270)
                      +++|+|.++|+++++|++||+|+.                                           .|+|+||+.++++
T Consensus        61 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~  140 (358)
T TIGR03451        61 EAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAG  140 (358)
T ss_pred             ceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehh
Confidence            467888889999999999999974                                           2789999999999


Q ss_pred             ccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 042426           42 QLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVD  119 (270)
Q Consensus        42 ~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~  119 (270)
                      + ++++ |++  ++. +++.++++++++|.++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++
T Consensus       141 ~-~~~i-p~~--~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~  215 (358)
T TIGR03451       141 Q-CTKV-DPA--ADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLE  215 (358)
T ss_pred             h-eEEC-CCC--CChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            9 9999 988  454 488888899999998877888999999999985 9999999999999999 5999999999999


Q ss_pred             HHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchH
Q 042426          120 LLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLM  197 (270)
Q Consensus       120 ~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  197 (270)
                      .++ ++|+++++++++. ++.+.+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|....    .....++..
T Consensus       216 ~~~-~~Ga~~~i~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~----~~~~~~~~~  289 (358)
T TIGR03451       216 WAR-EFGATHTVNSSGT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTP----DMTLELPLL  289 (358)
T ss_pred             HHH-HcCCceEEcCCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC----CceeeccHH
Confidence            998 9999999998876 788888888876 89999999997 588999999999999999997532    111234556


Q ss_pred             HHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          198 QVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      .++.+++++.+++....  ...+.++++++++++|++++  .++++|+++|+++|++.+++++.. |+++.
T Consensus       290 ~~~~~~~~i~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       290 DVFGRGGALKSSWYGDC--LPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             HHhhcCCEEEEeecCCC--CcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            77788888888765322  12567889999999999975  578899999999999999988765 77764

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=8.2e-36  Score=248.74  Aligned_cols=249  Identities=23%  Similarity=0.286  Sum_probs=209.2

Q ss_pred             ccceEEEEeecCCCC-CCCCCEEEec----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCC
Q 042426            5 SGYGVSKVLDSTHPN-YKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSP   78 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~-~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~   78 (270)
                      +++|+|.++|+++++ |++||+|+++    |+|+||+++++++ ++++ |++  +++ ++++++..++|||.++ ...+.
T Consensus        67 e~~G~V~~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~-~~~i-P~~--~~~~~aa~~~~~~~ta~~~~-~~~~~  141 (324)
T cd08291          67 EGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQ-CLPL-PDG--VSFEQGASSFVNPLTALGML-ETARE  141 (324)
T ss_pred             ceEEEEEEECCCccccCCCCCEEEecCCCCCcchheeeecHHH-eEEC-CCC--CCHHHHhhhcccHHHHHHHH-Hhhcc
Confidence            467888889999996 9999999986    8999999999999 9999 998  555 4777888889998655 45555


Q ss_pred             CCCcEEEEe-cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEe
Q 042426           79 KKGEYVYVS-AASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFE  156 (270)
Q Consensus        79 ~~g~~vlI~-ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d  156 (270)
                       +++.++|+ +++|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++++. ++.+.+.+.+++ ++|++||
T Consensus       142 -~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~~d~vid  218 (324)
T cd08291         142 -EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSDP-DFLEDLKELIAKLNATIFFD  218 (324)
T ss_pred             -CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-cHHHHHHHHhCCCCCcEEEE
Confidence             45566665 78899999999999999999999999999999998 8999999998877 888888888776 8999999


Q ss_pred             CCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHHCCcee
Q 042426          157 NVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       157 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~  235 (270)
                      |+|+......+++++++|+++.+|.....    .....+...++.+++++.+++...+ .....+.++++.+++. +.++
T Consensus       219 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  293 (324)
T cd08291         219 AVGGGLTGQILLAMPYGSTLYVYGYLSGK----LDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELK  293 (324)
T ss_pred             CCCcHHHHHHHHhhCCCCEEEEEEecCCC----CcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccc
Confidence            99998888899999999999999875421    1112445566788999988887654 2223567888999988 9999


Q ss_pred             eeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          236 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       236 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      +.++++|+++|+++|++.+.+++..||+++.
T Consensus       294 ~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         294 TTFASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             cceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence            9999999999999999999999999999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2e-35  Score=248.09  Aligned_cols=239  Identities=18%  Similarity=0.185  Sum_probs=198.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-----------------------------------cccceeeEeecCCccceeccC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-----------------------------------LTSWEEFSLIQSPQLLIKILD   49 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~~~~~~~~~~p   49 (270)
                      +++|+|+++  ++++|++||+|+.                                   .|+|+||++++++. ++++ |
T Consensus        66 E~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~-~~~~-P  141 (343)
T PRK09880         66 EVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQ-CIPY-P  141 (343)
T ss_pred             ccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHH-eEEC-C
Confidence            455677777  7889999999973                                   28899999999999 9999 9


Q ss_pred             CCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC
Q 042426           50 TSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD  128 (270)
Q Consensus        50 ~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~  128 (270)
                      ++  ++.+.+++..++++||+++.+ ....+|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|++
T Consensus       142 ~~--l~~~~aa~~~~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~  216 (343)
T PRK09880        142 EK--ADEKVMAFAEPLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGAD  216 (343)
T ss_pred             CC--CCHHHHHhhcHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCc
Confidence            99  665556677888999999955 45668999999986 9999999999999999 6999999999999998 89999


Q ss_pred             ceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceee
Q 042426          129 DAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICME  207 (270)
Q Consensus       129 ~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (270)
                      +++|+++. ++.+... . .+++|++|||+|++ .+..++++++++|+++.+|....      ...++...++.+++++.
T Consensus       217 ~vi~~~~~-~~~~~~~-~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~  287 (343)
T PRK09880        217 KLVNPQND-DLDHYKA-E-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISLK  287 (343)
T ss_pred             EEecCCcc-cHHHHhc-c-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEEE
Confidence            99998876 6544332 1 23699999999984 78899999999999999987431      22355667778899998


Q ss_pred             eccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          208 GFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ++...      .+.++++.+++++|++.+  .++++|+++|+++|++.+.+++..||+++.+
T Consensus       288 g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        288 GSFRF------TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             EEeec------cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            87642      256889999999999975  5778999999999999999988889999864

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=4.3e-35  Score=248.56  Aligned_cols=250  Identities=19%  Similarity=0.249  Sum_probs=207.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE   33 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~   33 (270)
                      +++|+|.++|++|++|++||+|++.                                                   |+|+
T Consensus        70 E~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~a  149 (378)
T PLN02827         70 EASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFS  149 (378)
T ss_pred             cceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccce
Confidence            5788888999999999999999752                                                   6899


Q ss_pred             eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGS  111 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~  111 (270)
                      ||+.++++. ++++ |++  +++ +++.++++++++|.++.+.+++++|++|||+|+ |++|++++|+|+.+|+ .|+++
T Consensus       150 eyv~v~~~~-~~~i-P~~--l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~  224 (378)
T PLN02827        150 EYTVVHSGC-AVKV-DPL--APLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGV  224 (378)
T ss_pred             eeEEechhh-eEEC-CCC--CCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence            999999999 9999 999  554 477888888999988767788999999999986 9999999999999999 57888


Q ss_pred             eCCHHHHHHHHHHhCCCceeecCCc-hhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccC-CEEEEEccccccccc
Q 042426          112 ARSKEKVDLLKHKFGFDDAFNYKEE-PDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRIC-GHIAVCGMISQYNIE  188 (270)
Q Consensus       112 ~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~  188 (270)
                      ++++++.+.++ ++|+++++++++. +++.+.+.+.+++++|++|||+|.. .+..+++.++++ |+++.+|....    
T Consensus       225 ~~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~----  299 (378)
T PLN02827        225 DINPEKAEKAK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA----  299 (378)
T ss_pred             CCCHHHHHHHH-HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC----
Confidence            88999999998 9999988888652 2677778777766899999999985 789999999998 99999987542    


Q ss_pred             CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          189 KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                       +........++.+++++.|+....+.  ....+.++.+++++|++++  .++++|+++++++|++.+.+++. .|+||+
T Consensus       300 -~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~  375 (378)
T PLN02827        300 -KPEVSAHYGLFLSGRTLKGSLFGGWK--PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIH  375 (378)
T ss_pred             -CccccccHHHHhcCceEEeeecCCCc--hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEE
Confidence             11111123567789999988765431  2356888999999999998  78889999999999999998886 599998


Q ss_pred             ec
Q 042426          267 VA  268 (270)
Q Consensus       267 ~~  268 (270)
                      +.
T Consensus       376 ~~  377 (378)
T PLN02827        376 MP  377 (378)
T ss_pred             ec
Confidence            64

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=5.5e-35  Score=246.47  Aligned_cols=242  Identities=15%  Similarity=0.180  Sum_probs=198.7

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe--------------------------------------cccceeeEeecCCcccee
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG--------------------------------------LTSWEEFSLIQSPQLLIK   46 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~   46 (270)
                      +++|+|+++|++|++|++||+|+.                                      .|+|+||+++++++ +++
T Consensus        73 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~  151 (360)
T PLN02586         73 EIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHF-VLR  151 (360)
T ss_pred             ceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHH-eee
Confidence            457888889999999999999962                                      27899999999999 999


Q ss_pred             ccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 042426           47 ILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF  125 (270)
Q Consensus        47 ~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~  125 (270)
                      + |++  +++ ++|++++.+.|+|+++.....+++|++|+|.|+ |++|++++|+|+.+|++|++++.++++...+.+++
T Consensus       152 l-P~~--ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~  227 (360)
T PLN02586        152 F-PDN--LPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL  227 (360)
T ss_pred             C-CCC--CCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC
Confidence            9 999  555 488899999999999876677789999999886 99999999999999999988887766654443389


Q ss_pred             CCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcc
Q 042426          126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRI  204 (270)
Q Consensus       126 g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  204 (270)
                      |+++++++++. +   .+.+..+ ++|++||++|.. .+..++++++++|+++.+|....      ...++...++.++.
T Consensus       228 Ga~~vi~~~~~-~---~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~  296 (360)
T PLN02586        228 GADSFLVSTDP-E---KMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVLGRK  296 (360)
T ss_pred             CCcEEEcCCCH-H---HHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHhCCe
Confidence            99988876653 2   3444433 699999999974 78899999999999999986431      12345566677777


Q ss_pred             eeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426          205 CMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      .+.++..++     .+.++++++++++|++++.+ ++|+++|+++|++.+.+++..||+|+++.
T Consensus       297 ~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~  354 (360)
T PLN02586        297 LVGGSDIGG-----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDVA  354 (360)
T ss_pred             EEEEcCcCC-----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence            777776543     35689999999999999876 57999999999999999998899999863

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-35  Score=246.05  Aligned_cols=251  Identities=18%  Similarity=0.182  Sum_probs=202.0

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|.++|+++++|++||+|++                              .|+|+||+.++++. ++++ |++  +
T Consensus        60 e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~--~  135 (347)
T PRK10309         60 EFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKN-LFAL-PTD--M  135 (347)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHH-eEEC-cCC--C
Confidence            467888889999999999999976                              27899999999999 9999 998  6


Q ss_pred             cccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      +++.|++..+++++|+++ ....+++|++|+|+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|+++++++
T Consensus       136 s~~~aa~~~~~~~~~~~~-~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~  212 (347)
T PRK10309        136 PIEDGAFIEPITVGLHAF-HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNS  212 (347)
T ss_pred             CHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecC
Confidence            654333333566778876 5678899999999975 99999999999999996 788888999999987 8999989988


Q ss_pred             CCchhHHHHHHhHcCC-Ccc-EEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426          134 KEEPDLDAALNRCFPE-GID-IYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL  210 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~-~~d-~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (270)
                      ++. + .+.+.+.+.+ ++| ++|||+|+. .+..++++++++|+++.+|.....   .+....+...++.+++++.|+.
T Consensus       213 ~~~-~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~---~~~~~~~~~~~~~~~~~i~g~~  287 (347)
T PRK10309        213 REM-S-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD---LHLTSATFGKILRKELTVIGSW  287 (347)
T ss_pred             ccc-C-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC---cccChhhhhHHhhcCcEEEEEe
Confidence            765 5 4556666665 888 999999974 889999999999999999975421   1111112345677889999876


Q ss_pred             ccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          211 AGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      .........+.++++++++++|++.  +.++++|+++|+++|++.+.+++..||+|+++
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        288 MNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             ccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            6432111246788999999999984  66888999999999999999988889999975

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=2.2e-35  Score=243.77  Aligned_cols=257  Identities=26%  Similarity=0.358  Sum_probs=202.8

Q ss_pred             cccceEEEEe---e-cCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhh
Q 042426            4 LSGYGVSKVL---D-STHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHEL   75 (270)
Q Consensus         4 i~g~g~v~~v---G-~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~   75 (270)
                      -+|+|++..+   | ..+..+..||.+...   |+|+||.++++.. ++++ |++  +++ ++|++|.++.|||.++.+.
T Consensus        71 ~~g~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~-~~~~-P~~--l~~~~aa~~p~~~~tA~~al~~~  146 (347)
T KOG1198|consen   71 RDGSGVVGAVESVGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKL-LVKI-PES--LSFEEAAALPLAALTALSALFQL  146 (347)
T ss_pred             cccCCceeEEeccccccccceEeeeEEeeccCCCceeeEEEcchhh-ccCC-CCc--cChhhhhcCchHHHHHHHHHHhc
Confidence            4566664443   4 334456667777666   9999999999999 9999 999  665 5999999999999999999


Q ss_pred             c------CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC
Q 042426           76 C------SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        76 ~------~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      +      ++++|++|||+||+|++|++++|+|++.|+..+++++++++.++++ ++|+++++||+++ ++.+.+.+.+.+
T Consensus       147 ~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGAd~vvdy~~~-~~~e~~kk~~~~  224 (347)
T KOG1198|consen  147 APGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGADEVVDYKDE-NVVELIKKYTGK  224 (347)
T ss_pred             cccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCCcEeecCCCH-HHHHHHHhhcCC
Confidence            9      8999999999999999999999999999965555555999999999 9999999999998 999999998844


Q ss_pred             CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHH-HHh---hcceeeeccccCc-ccchHHHHHH
Q 042426          150 GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQ-VVG---KRICMEGFLAGDF-YHQYPKFLEL  224 (270)
Q Consensus       150 ~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~-~~~~~~~~~~  224 (270)
                      +||+||||+|+.....+..++..+|+...++............  ..+. +..   ....+.+...... .....+.++.
T Consensus       225 ~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  302 (347)
T KOG1198|consen  225 GVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLD--DLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKA  302 (347)
T ss_pred             CccEEEECCCCCccccchhhhccCCceEEEEeccccccccccc--cchhhhhhhhheeeeeeccceeeeeecCCHHHHHH
Confidence            9999999999988889999999888655555443321111111  1111 111   1112222222211 4455788999


Q ss_pred             HHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426          225 VMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       225 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      +.+++++|+++|.+.+.||++++.+|++.+.++...||+++++.
T Consensus       303 l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  303 LVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             HHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            99999999999999999999999999999999999999999875

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.5e-34  Score=244.52  Aligned_cols=241  Identities=17%  Similarity=0.205  Sum_probs=199.8

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe--------------------------------------cccceeeEeecCCcccee
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG--------------------------------------LTSWEEFSLIQSPQLLIK   46 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~   46 (270)
                      +++|+|.++|+++++|++||+|..                                      .|+|+||++++++. +++
T Consensus        67 E~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~  145 (375)
T PLN02178         67 EIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRF-VLS  145 (375)
T ss_pred             eeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHH-eEE
Confidence            457888889999999999999962                                      27899999999999 999


Q ss_pred             ccCCCCCccc-cccccCchhhhHHHHhhhhcC-CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH
Q 042426           47 ILDTSVPLPY-YTGILGMPGLTAYGGLHELCS-PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-VDLLKH  123 (270)
Q Consensus        47 ~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~-~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-~~~~~~  123 (270)
                      + |++  +++ +++++++++.|+|+++..... .++|++|+|.|+ |++|++++|+|+.+|++|+++++++++ .+.++ 
T Consensus       146 l-P~~--ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~-  220 (375)
T PLN02178        146 I-PDG--LPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID-  220 (375)
T ss_pred             C-CCC--CCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-
Confidence            9 999  555 488899999999999865443 368999999986 999999999999999999999877554 66776 


Q ss_pred             HhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhh
Q 042426          124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGK  202 (270)
Q Consensus       124 ~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  202 (270)
                      ++|+++++++++.    +.+.+.++ ++|++|||+|.. .+..++++++++|+++.+|....      ...++...++.+
T Consensus       221 ~lGa~~~i~~~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~  289 (375)
T PLN02178        221 RLGADSFLVTTDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLVLG  289 (375)
T ss_pred             hCCCcEEEcCcCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHHhC
Confidence            8999988886642    23444443 699999999986 78999999999999999987431      123556677788


Q ss_pred             cceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426          203 RICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      ++++.|+....     .+.+.++++++.+|++++.+ .+||++|+++|++.+.+++..||+|+++.
T Consensus       290 ~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~  349 (375)
T PLN02178        290 RKMVGGSQIGG-----MKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDVA  349 (375)
T ss_pred             CeEEEEeCccC-----HHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEec
Confidence            99998877654     46788999999999999877 56999999999999999998899999873

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.8e-34  Score=245.37  Aligned_cols=249  Identities=20%  Similarity=0.244  Sum_probs=204.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe------------------------------------------------------cc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------------------------------LT   30 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------------------------------~g   30 (270)
                      +++|+|.++|+++++|++||+|++                                                      .|
T Consensus        72 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G  151 (381)
T PLN02740         72 EAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTS  151 (381)
T ss_pred             cceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCc
Confidence            567888889999999999999974                                                      26


Q ss_pred             cceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EE
Q 042426           31 SWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YV  108 (270)
Q Consensus        31 ~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v  108 (270)
                      +|+||++++++. ++++ |++  ++. +++.+++++.|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|
T Consensus       152 ~~aey~~v~~~~-~~~i-P~~--~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~V  226 (381)
T PLN02740        152 TFTEYTVLDSAC-VVKI-DPN--APLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKI  226 (381)
T ss_pred             cceeEEEEehHH-eEEC-CCC--CCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcE
Confidence            899999999999 9999 998  554 478888899999998877789999999999996 9999999999999999 69


Q ss_pred             EEEeCCHHHHHHHHHHhCCCceeecCCc-hhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEcccccc
Q 042426          109 VGSARSKEKVDLLKHKFGFDDAFNYKEE-PDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQY  185 (270)
Q Consensus       109 ~~~~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~  185 (270)
                      +++++++++++.++ ++|+++++++++. .++.+.+.+.+++++|++||++|+ ..+..++++++++ |+++.+|.....
T Consensus       227 i~~~~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~  305 (381)
T PLN02740        227 IGVDINPEKFEKGK-EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP  305 (381)
T ss_pred             EEEcCChHHHHHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC
Confidence            99999999999998 9999988887753 147777887766689999999997 5889999999996 999999975421


Q ss_pred             cccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceE
Q 042426          186 NIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQ  263 (270)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~  263 (270)
                          ....+....+ .++.++.|+....+.  ....+.++++++.+|++++  .++.+|+++|+++|++.+.+++. .|+
T Consensus       306 ----~~~~~~~~~~-~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~  377 (381)
T PLN02740        306 ----KMLPLHPMEL-FDGRSITGSVFGDFK--GKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRC  377 (381)
T ss_pred             ----ceecccHHHH-hcCCeEEEEecCCCC--cHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeE
Confidence                1112222223 367888887665432  1356889999999998864  57789999999999999988875 499


Q ss_pred             EEEe
Q 042426          264 LVAV  267 (270)
Q Consensus       264 vv~~  267 (270)
                      +|+.
T Consensus       378 ~~~~  381 (381)
T PLN02740        378 LLHL  381 (381)
T ss_pred             EEeC
Confidence            8863

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=7.4e-35  Score=224.63  Aligned_cols=253  Identities=22%  Similarity=0.310  Sum_probs=209.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      ||.|.|+.||++++.|++||+|+..    |+|++|.+.+++. ++++ ++.+++. +||++.+..+|||.+|.+.-++.+
T Consensus        84 EGv~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~-Li~v-d~~~pl~-~AAT~~VNP~TAyrmL~dfv~L~~  160 (354)
T KOG0025|consen   84 EGVGEVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESD-LIKV-DKDIPLA-SAATLSVNPCTAYRMLKDFVQLNK  160 (354)
T ss_pred             cceEEEEEecCCcCccCCCCeEeecCCCCccceeeEeecccc-eEEc-CCcCChh-hhheeccCchHHHHHHHHHHhcCC
Confidence            4566677789999999999999877    9999999999999 9999 8886655 699999999999999999999999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhH-cCC-CccEEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRC-FPE-GIDIYF  155 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~-~~~-~~d~v~  155 (270)
                      ||+|+..||++++|++.+|+|+++|++-+-++|+..+.+++++   .+|+++|+.-.+.  ......+. ... ++.+.|
T Consensus       161 GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel--~~~~~~k~~~~~~~prLal  238 (354)
T KOG0025|consen  161 GDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL--RDRKMKKFKGDNPRPRLAL  238 (354)
T ss_pred             CCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh--cchhhhhhhccCCCceEEE
Confidence            9999999999999999999999999999999998877776653   5799999854331  11112111 122 689999


Q ss_pred             eCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc------ccchHHHHHHHHHHH
Q 042426          156 ENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF------YHQYPKFLELVMLAI  229 (270)
Q Consensus       156 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~  229 (270)
                      ||+|+.......+.|..||+++++|.++.     .+...+...+..|+++++|+++..|      ++...+.+.++.+++
T Consensus       239 NcVGGksa~~iar~L~~GgtmvTYGGMSk-----qPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~  313 (354)
T KOG0025|consen  239 NCVGGKSATEIARYLERGGTMVTYGGMSK-----QPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLY  313 (354)
T ss_pred             eccCchhHHHHHHHHhcCceEEEecCccC-----CCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHH
Confidence            99999988899999999999999999885     4445667788899999999999877      334457789999999


Q ss_pred             HCCceeeeeeeecCcccHHHHHHHHhcCC-ccceEEEEe
Q 042426          230 KEGKLVYVEDIAEGLEKAPSALVGIFTGQ-NVGKQLVAV  267 (270)
Q Consensus       230 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~  267 (270)
                      ..|+++.+.....++++...|++...+.. ..||-++.+
T Consensus       314 ~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  314 RRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             HcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence            99999999888899999999998766543 335555544

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=3.8e-34  Score=242.26  Aligned_cols=249  Identities=20%  Similarity=0.248  Sum_probs=200.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE   33 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~   33 (270)
                      +++|+|.++|++|++|++||+|+..                                                   |+|+
T Consensus        62 E~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~a  141 (368)
T TIGR02818        62 EGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFS  141 (368)
T ss_pred             ccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccce
Confidence            5677888899999999999999642                                                   4899


Q ss_pred             eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGS  111 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~  111 (270)
                      ||+++++++ ++++ |++  +++ ++++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus       142 ey~~v~~~~-~~~l-P~~--l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~  216 (368)
T TIGR02818       142 EYTVVPEIS-LAKI-NPA--APLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAI  216 (368)
T ss_pred             eeEEechhh-eEEC-CCC--CCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence            999999999 9999 998  555 488889999999999877889999999999986 9999999999999999 89999


Q ss_pred             eCCHHHHHHHHHHhCCCceeecCCc-hhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEccccccccc
Q 042426          112 ARSKEKVDLLKHKFGFDDAFNYKEE-PDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQYNIE  188 (270)
Q Consensus       112 ~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  188 (270)
                      ++++++++.++ ++|+++++++++. .++.+.+.+.+++++|++|||+|+ ..+..++++++++ |+++.+|..+..   
T Consensus       217 ~~~~~~~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~---  292 (368)
T TIGR02818       217 DINPAKFELAK-KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG---  292 (368)
T ss_pred             cCCHHHHHHHH-HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC---
Confidence            99999999998 9999988887642 156677777776689999999997 4788999999886 999999875321   


Q ss_pred             CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          189 KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                       .....+...++. +..+.++.....  .....+.++++++.+|++.  +.++++|+++|+++|++.+.+++. .|++|+
T Consensus       293 -~~~~~~~~~~~~-~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~  367 (368)
T TIGR02818       293 -QEISTRPFQLVT-GRVWRGSAFGGV--KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIH  367 (368)
T ss_pred             -CcccccHHHHhc-cceEEEeeccCC--CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEee
Confidence             111122333332 334555543321  1245688999999999885  457889999999999999988764 699987


Q ss_pred             e
Q 042426          267 V  267 (270)
Q Consensus       267 ~  267 (270)
                      +
T Consensus       368 ~  368 (368)
T TIGR02818       368 Y  368 (368)
T ss_pred             C
Confidence            4

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=4e-34  Score=238.66  Aligned_cols=250  Identities=19%  Similarity=0.261  Sum_probs=214.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      +++|.|.++|++++.|++||+|++.   |+|++|+.++++. ++++ |++  +++ +++.++..++++|+++ ..+++++
T Consensus        65 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~i-p~~--~~~~~aa~~~~~~~ta~~~~-~~~~~~~  139 (324)
T cd08292          65 EAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADG-LVPL-PDG--ISDEVAAQLIAMPLSALMLL-DFLGVKP  139 (324)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEeccCCCcceeEEEEchHH-eEEC-CCC--CCHHHhhhccccHHHHHHHH-HhhCCCC
Confidence            5678888899999999999999985   8999999999999 9999 998  555 4788888889999988 4588999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g  159 (270)
                      |++++|+|++|++|++++|+|+.+|++++++++++++.+.++ ++|+++++++++. ++.+.+.+.+++ ++|++|||+|
T Consensus       140 g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g  217 (324)
T cd08292         140 GQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSVG  217 (324)
T ss_pred             CCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECCC
Confidence            999999999999999999999999999999999999999998 6899888888876 788888888887 9999999999


Q ss_pred             cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----ccchHHHHHHHHHHHHCCce
Q 042426          160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~  234 (270)
                      +.....++++++++|+++.+|....     .....+....+.+++++.++....+     +....+.++++.+++.+|.+
T Consensus       218 ~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i  292 (324)
T cd08292         218 GKLAGELLSLLGEGGTLVSFGSMSG-----EPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQL  292 (324)
T ss_pred             ChhHHHHHHhhcCCcEEEEEecCCC-----CCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCc
Confidence            9888999999999999999987431     1223445556678999988876543     12235678899999999999


Q ss_pred             eeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      .+.+...|+++++++|++.+.++...+|++++
T Consensus       293 ~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         293 LLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             cCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            86667789999999999999988888898863

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=5.6e-34  Score=237.61  Aligned_cols=234  Identities=15%  Similarity=0.075  Sum_probs=196.3

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSV   52 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~   52 (270)
                      .+++|+|.++|+++++|++||+|+.                               .|+|+||+.+++++ ++++ |++ 
T Consensus        62 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~-  138 (329)
T TIGR02822        62 HEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAF-AYRL-PTG-  138 (329)
T ss_pred             cceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEecccc-EEEC-CCC-
Confidence            3567888889999999999999963                               27899999999999 9999 999 


Q ss_pred             Cccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee
Q 042426           53 PLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAF  131 (270)
Q Consensus        53 ~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi  131 (270)
                       +++ ++++++++++|||+++. .+++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|+++++
T Consensus       139 -~~~~~aa~l~~~~~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi  214 (329)
T TIGR02822       139 -YDDVELAPLLCAGIIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAG  214 (329)
T ss_pred             -CCHHHhHHHhccchHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceec
Confidence             554 47889999999999995 588999999999997 99999999999999999999999999999998 99999888


Q ss_pred             ecCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426          132 NYKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL  210 (270)
Q Consensus       132 ~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (270)
                      ++.+. .         .+++|+++++.+. ..+..++++++++|+++.+|....     ....++...++.+++++.++.
T Consensus       215 ~~~~~-~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~  279 (329)
T TIGR02822       215 GAYDT-P---------PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLT-----DTPPLNYQRHLFYERQIRSVT  279 (329)
T ss_pred             ccccc-C---------cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCc-----cCCCCCHHHHhhCCcEEEEee
Confidence            75432 1         1258888888765 588899999999999999997432     112345566677888888776


Q ss_pred             ccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          211 AGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      ...     ++.+.++.+++++|++++ ++++|+++|+++|++.+.+++..||+|+
T Consensus       280 ~~~-----~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       280 SNT-----RADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             cCC-----HHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            433     456788899999999975 4678999999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=1.2e-33  Score=239.62  Aligned_cols=248  Identities=18%  Similarity=0.237  Sum_probs=204.6

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec----------------------------------------------------cc
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL----------------------------------------------------TS   31 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~----------------------------------------------------g~   31 (270)
                      .+++|+|.++|++|++|++||+|+..                                                    |+
T Consensus        62 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~  141 (369)
T cd08301          62 HEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTST  141 (369)
T ss_pred             cccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeecccc
Confidence            35788899999999999999999852                                                    57


Q ss_pred             ceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEE
Q 042426           32 WEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVV  109 (270)
Q Consensus        32 ~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~  109 (270)
                      |+||+++++.+ ++++ |++  +++ +++.+++++.|+|.++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +|+
T Consensus       142 ~aey~~v~~~~-~~~i-P~~--~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi  216 (369)
T cd08301         142 FSEYTVVHVGC-VAKI-NPE--APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRII  216 (369)
T ss_pred             ceeEEEEeccc-EEEC-CCC--CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence            99999999999 9999 998  555 478888899999998878889999999999986 9999999999999999 899


Q ss_pred             EEeCCHHHHHHHHHHhCCCceeecCCc-hhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccC-CEEEEEccccccc
Q 042426          110 GSARSKEKVDLLKHKFGFDDAFNYKEE-PDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRIC-GHIAVCGMISQYN  186 (270)
Q Consensus       110 ~~~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~  186 (270)
                      ++++++++.+.++ ++|++.++++.+. .++.+.+++.+++++|++|||+|.. .+..++++++++ |+++.+|..... 
T Consensus       217 ~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~-  294 (369)
T cd08301         217 GVDLNPSKFEQAK-KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD-  294 (369)
T ss_pred             EEcCCHHHHHHHH-HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC-
Confidence            9999999999998 8999888887652 1566777777666899999999875 688899999996 999999985421 


Q ss_pred             ccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEE
Q 042426          187 IEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQL  264 (270)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~v  264 (270)
                         ....++...+ .+++++.|+....+  ..+..++++++++.+|.++.  .++++|+++|+++|++.+.+++.. |++
T Consensus       295 ---~~~~~~~~~~-~~~~~i~g~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~  367 (369)
T cd08301         295 ---AVFSTHPMNL-LNGRTLKGTLFGGY--KPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCI  367 (369)
T ss_pred             ---cccccCHHHH-hcCCeEEEEecCCC--ChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEE
Confidence               1112333333 36888988876543  22456889999999998765  467889999999999999998865 887


Q ss_pred             E
Q 042426          265 V  265 (270)
Q Consensus       265 v  265 (270)
                      +
T Consensus       368 ~  368 (369)
T cd08301         368 L  368 (369)
T ss_pred             e
Confidence            6

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.1e-33  Score=239.58  Aligned_cols=248  Identities=23%  Similarity=0.310  Sum_probs=201.1

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE   33 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~   33 (270)
                      +++|+|.++|+++++|++||+|++.                                                   |+|+
T Consensus        63 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~a  142 (368)
T cd08300          63 EGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFS  142 (368)
T ss_pred             ceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccce
Confidence            5678888899999999999999752                                                   4799


Q ss_pred             eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGS  111 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~  111 (270)
                      ||+.++++. ++++ |++  +++ +++++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus       143 ey~~v~~~~-~~~i-P~~--l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~  217 (368)
T cd08300         143 EYTVVAEIS-VAKI-NPE--APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGI  217 (368)
T ss_pred             eEEEEchhc-eEeC-CCC--CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence            999999999 9999 998  555 488888899999999877788999999999985 9999999999999999 79999


Q ss_pred             eCCHHHHHHHHHHhCCCceeecCCch-hHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEccccccccc
Q 042426          112 ARSKEKVDLLKHKFGFDDAFNYKEEP-DLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQYNIE  188 (270)
Q Consensus       112 ~~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  188 (270)
                      ++++++.+.++ ++|+++++++++.+ ++.+.+.+.+++++|++|||+|+ ..+..++++++++ |+++.+|.....   
T Consensus       218 ~~~~~~~~~~~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~---  293 (368)
T cd08300         218 DINPDKFELAK-KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG---  293 (368)
T ss_pred             eCCHHHHHHHH-HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC---
Confidence            99999999998 99999999887641 47788888776689999999997 5889999999886 999999875311   


Q ss_pred             CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          189 KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                       .....+...+. ++..+.++....+  ...+.+.++++++.+|++++  .++++|+++|+++|++.+.+++. .|++++
T Consensus       294 -~~~~~~~~~~~-~~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         294 -QEISTRPFQLV-TGRVWKGTAFGGW--KSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             -CccccCHHHHh-hcCeEEEEEeccc--CcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence             11112222222 2345555544332  22467888999999999875  47789999999999999988765 588874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.2e-33  Score=238.32  Aligned_cols=242  Identities=20%  Similarity=0.215  Sum_probs=206.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|.++|+++++|++||+|++                               .|+|++|+.++++. ++++ |++  
T Consensus        71 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~-~~~l-P~~--  146 (351)
T cd08233          71 EFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYH-VHKL-PDN--  146 (351)
T ss_pred             cceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHH-eEEC-cCC--
Confidence            577889999999999999999985                               38899999999999 9999 998  


Q ss_pred             ccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      ++.+.+++..++.|||+++ ..+++++|++++|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.+++
T Consensus       147 ~~~~~aa~~~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~~i~  223 (351)
T cd08233         147 VPLEEAALVEPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATIVLD  223 (351)
T ss_pred             CCHHHhhhccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEC
Confidence            5654334447888999999 7788999999999985 9999999999999999 8999999999999998 899999999


Q ss_pred             cCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426          133 YKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL  210 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (270)
                      +++. ++.+.+.+.+++ ++|+++||+|. ..+..++++++++|+++.+|....      ...++...++.+++++.+..
T Consensus       224 ~~~~-~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~~  296 (351)
T cd08233         224 PTEV-DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLVLKEKTLTGSI  296 (351)
T ss_pred             CCcc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHHhhCcEEEEEe
Confidence            8887 888888888776 79999999985 588999999999999999987541      12355667778899998876


Q ss_pred             ccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccH-HHHHHHHhcCCcc-ceEEE
Q 042426          211 AGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKA-PSALVGIFTGQNV-GKQLV  265 (270)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~-~~a~~~~~~~~~~-gk~vv  265 (270)
                      ...     .+.++++.+++++|+++  +.+..+|+++|+ ++|++.+.+++.. +|+||
T Consensus       297 ~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         297 CYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             ccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            543     46789999999999995  456788999996 7999999998864 89987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.2e-33  Score=236.65  Aligned_cols=243  Identities=18%  Similarity=0.164  Sum_probs=202.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe--------------------------------------cccceeeEeecCCcccee
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG--------------------------------------LTSWEEFSLIQSPQLLIK   46 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~   46 (270)
                      +++|+|+++|+++++|++||+|+.                                      .|+|+||++++++. +++
T Consensus        70 E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~  148 (357)
T PLN02514         70 EVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKF-VVK  148 (357)
T ss_pred             eeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHH-eEE
Confidence            567888889999999999999962                                      27899999999999 999


Q ss_pred             ccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 042426           47 ILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF  125 (270)
Q Consensus        47 ~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~  125 (270)
                      + |++  ++. +++++++++.|||+++......++|++++|+|+ |++|++++|+|+.+|++|+++++++++.+.+.+++
T Consensus       149 i-P~~--~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~  224 (357)
T PLN02514        149 I-PEG--MAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHL  224 (357)
T ss_pred             C-CCC--CCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhc
Confidence            9 999  555 588899999999999977677789999999975 99999999999999999999998888777665479


Q ss_pred             CCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcc
Q 042426          126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRI  204 (270)
Q Consensus       126 g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  204 (270)
                      |+++++++.+.    ..+.+.+. ++|++|||+|. ..+..++++++++|+++.+|....      ...++...++.++.
T Consensus       225 Ga~~~i~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~  293 (357)
T PLN02514        225 GADDYLVSSDA----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------PLQFVTPMLMLGRK  293 (357)
T ss_pred             CCcEEecCCCh----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------CCcccHHHHhhCCc
Confidence            99877765542    23333333 69999999996 588899999999999999997532      12355667778889


Q ss_pred             eeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          205 CMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      ++.|+....     ...++++++++++|++++.+ ++|+++|+++|++.+.+++..||++++++.
T Consensus       294 ~i~g~~~~~-----~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~  352 (357)
T PLN02514        294 VITGSFIGS-----MKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG  352 (357)
T ss_pred             EEEEEecCC-----HHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence            999887654     35788999999999998877 479999999999999999988999998754

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=2.3e-33  Score=236.16  Aligned_cols=243  Identities=19%  Similarity=0.221  Sum_probs=202.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCC----
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDT----   50 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~----   50 (270)
                      +++|+|.++|++++.+ +||+|+.                              .|+|+||+.+++++ ++++ |+    
T Consensus        60 E~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~-~~~i-p~~~~~  136 (349)
T TIGR03201        60 EISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKG-LCVV-DEARLA  136 (349)
T ss_pred             cceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHH-eEEC-Cccccc
Confidence            5778888899999987 9999975                              28999999999999 9999 87    


Q ss_pred             --CCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 042426           51 --SVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF  127 (270)
Q Consensus        51 --~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~  127 (270)
                        +  ++. ++++++.++.++|+++. ..++++|++|+|+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|+
T Consensus       137 ~~~--~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga  211 (349)
T TIGR03201       137 AAG--LPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGA  211 (349)
T ss_pred             ccC--CCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCC
Confidence              6  454 47888899999999985 478999999999998 99999999999999999999999999999998 8999


Q ss_pred             CceeecCCc--hhHHHHHHhHcCC-Ccc----EEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHH
Q 042426          128 DDAFNYKEE--PDLDAALNRCFPE-GID----IYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQV  199 (270)
Q Consensus       128 ~~vi~~~~~--~~~~~~i~~~~~~-~~d----~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  199 (270)
                      ++++++.+.  .++.+.+.+.+++ ++|    ++|||+|+. .++.++++++++|+++.+|....      ...++...+
T Consensus       212 ~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~  285 (349)
T TIGR03201       212 DLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA------KTEYRLSNL  285 (349)
T ss_pred             ceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC------CcccCHHHH
Confidence            988887653  1466777777776 776    899999985 67788999999999999997542      123445566


Q ss_pred             HhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          200 VGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +.++.++.+.+...     .+.++++++++++|++.+  .+ +.|+++++++|++.+.+++..||+++++
T Consensus       286 ~~~~~~~~g~~~~~-----~~~~~~~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       286 MAFHARALGNWGCP-----PDRYPAALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             hhcccEEEEEecCC-----HHHHHHHHHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence            66777887765432     467889999999999865  34 4789999999999999999899998853

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=4.7e-33  Score=235.53  Aligned_cols=246  Identities=20%  Similarity=0.275  Sum_probs=201.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec--------------------------------------------------cccee
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL--------------------------------------------------TSWEE   34 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--------------------------------------------------g~~~~   34 (270)
                      +++|+|.++|++++++++||+|++.                                                  |+|+|
T Consensus        62 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae  141 (365)
T cd08277          62 EGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQ  141 (365)
T ss_pred             ceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCccccccccccccee
Confidence            5678888899999999999999762                                                  68999


Q ss_pred             eEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEe
Q 042426           35 FSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSA  112 (270)
Q Consensus        35 ~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~  112 (270)
                      |++++++. ++++ |++  ++. ++++++++++|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|++++
T Consensus       142 ~~~v~~~~-~~~l-P~~--l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~  216 (365)
T cd08277         142 YTVVDENY-VAKI-DPA--APLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVD  216 (365)
T ss_pred             eEEEchhh-eEEC-CCC--CCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Confidence            99999999 9999 999  555 488889999999998877889999999999975 9999999999999999 799999


Q ss_pred             CCHHHHHHHHHHhCCCceeecCCc-hhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEcccccccccC
Q 042426          113 RSKEKVDLLKHKFGFDDAFNYKEE-PDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQYNIEK  189 (270)
Q Consensus       113 ~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~  189 (270)
                      +++++++.++ ++|++++++.++. .++.+.+.+.+++++|++|||+|+ ..+..++++++++ |+++.+|.....    
T Consensus       217 ~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~----  291 (365)
T cd08277         217 INEDKFEKAK-EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA----  291 (365)
T ss_pred             CCHHHHHHHH-HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcc----
Confidence            9999999998 8999988887653 135667777666689999999996 5778999999885 999999875421    


Q ss_pred             CCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          190 PEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                       ...++...+.. +.++.++....+  .....++++++++.++.+.  +.++++|+++|+++|++.+.+++ ..|+++
T Consensus       292 -~~~~~~~~~~~-~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i  364 (365)
T cd08277         292 -ELSIRPFQLIL-GRTWKGSFFGGF--KSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI  364 (365)
T ss_pred             -ccccCHhHHhh-CCEEEeeecCCC--ChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence             11233334443 778887766543  2235678999999999765  56788999999999999998887 458876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.7e-33  Score=218.64  Aligned_cols=249  Identities=21%  Similarity=0.269  Sum_probs=211.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe----------------------------------------------------cccc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG----------------------------------------------------LTSW   32 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~----------------------------------------------------~g~~   32 (270)
                      |++|+|+.+|++|++|++||+|+.                                                    ..+|
T Consensus        68 EaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StF  147 (375)
T KOG0022|consen   68 EAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTF  147 (375)
T ss_pred             cceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccc
Confidence            566888889999999999999942                                                    1379


Q ss_pred             eeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 042426           33 EEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGS  111 (270)
Q Consensus        33 ~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~  111 (270)
                      +||.+++... +.++ ++..|++ .+|.|.+...|+|.+..+.+++++|+++.|.|- |++|+++++-|+..|+ +++.+
T Consensus       148 sEYTVv~~~~-v~kI-d~~aPl~-kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgv  223 (375)
T KOG0022|consen  148 SEYTVVDDIS-VAKI-DPSAPLE-KVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGV  223 (375)
T ss_pred             eeEEEeecce-eEec-CCCCChh-heeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEE
Confidence            9999999999 9999 6665566 699999999999999989999999999999997 9999999999999999 99999


Q ss_pred             eCCHHHHHHHHHHhCCCceeecCCch-hHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEccccccccc
Q 042426          112 ARSKEKVDLLKHKFGFDDAFNYKEEP-DLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQYNIE  188 (270)
Q Consensus       112 ~~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  188 (270)
                      +-++++.+.++ ++|+++.+|..+.. .+.+.+.+++++|+|+-|||+|+ ..+++++.+...+ |+-+.+|....    
T Consensus       224 DiN~~Kf~~ak-~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~----  298 (375)
T KOG0022|consen  224 DINPDKFEKAK-EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA----  298 (375)
T ss_pred             ecCHHHHHHHH-hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC----
Confidence            99999999999 99999899887432 48889999999999999999998 5889999999998 99999998654    


Q ss_pred             CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          189 KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      .......+..++. +.++.|+..+.+  ..+..+..+.+...++++.  ..++..+||+++++||+.|.+++.. |.|+.
T Consensus       299 ~~~i~~~p~~l~~-GR~~~Gs~FGG~--K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~  374 (375)
T KOG0022|consen  299 GQEISTRPFQLVT-GRTWKGSAFGGF--KSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW  374 (375)
T ss_pred             Ccccccchhhhcc-ccEEEEEecccc--cchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence            2333444444444 667777776665  3467889999999999775  4688899999999999999999877 76665

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.8e-32  Score=234.39  Aligned_cols=247  Identities=20%  Similarity=0.257  Sum_probs=207.1

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|.++|++++.|++||+|++.                               |+|++|+++++.. ++++ |++  
T Consensus        88 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~-l~~i-P~~--  163 (393)
T cd08246          88 DASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQ-LMPK-PKH--  163 (393)
T ss_pred             ceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHH-eEEC-CCC--
Confidence            4678888899999999999999764                               7899999999999 9999 999  


Q ss_pred             ccc-cccccCchhhhHHHHhhhh--cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce
Q 042426           54 LPY-YTGILGMPGLTAYGGLHEL--CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA  130 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~--~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v  130 (270)
                      ++. +++.++++++|||+++...  ++++++++++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|++++
T Consensus       164 l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G~~~~  242 (393)
T cd08246         164 LSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALGAEGV  242 (393)
T ss_pred             CCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCCEE
Confidence            555 4788999999999998655  68899999999999999999999999999999999999999999998 7999888


Q ss_pred             eecCCch---------------------hHHHHHHhHcCC--CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccc
Q 042426          131 FNYKEEP---------------------DLDAALNRCFPE--GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNI  187 (270)
Q Consensus       131 i~~~~~~---------------------~~~~~i~~~~~~--~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  187 (270)
                      +++++.+                     .+.+.+.+.+++  ++|+++||+|+..+..++++++++|+++.+|.....  
T Consensus       243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~--  320 (393)
T cd08246         243 INRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGY--  320 (393)
T ss_pred             EcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCC--
Confidence            8764320                     245667776665  799999999988889999999999999999875421  


Q ss_pred             cCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcC-CccceEEEE
Q 042426          188 EKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTG-QNVGKQLVA  266 (270)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~  266 (270)
                         ....+...+..++.++.+.+...     .+.+.++.++++++.+.+.+.++|++++++++++.+.++ +..||+++-
T Consensus       321 ---~~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         321 ---NHTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             ---CCCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence               12244555667777787776543     356788999999999988777889999999999999998 788999874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=2.1e-32  Score=228.19  Aligned_cols=251  Identities=23%  Similarity=0.263  Sum_probs=213.8

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSP   78 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~   78 (270)
                      +++|+|.++|++++.+++||+|++.     |+|++|+.+++++ ++++ |++  ++. ++++++..++||| ++...+++
T Consensus        66 e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~--~~~~~a~~~~~~~~ta~-~~~~~~~~  140 (324)
T cd08244          66 EVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDS-LHPV-PDG--LDLEAAVAVVHDGRTAL-GLLDLATL  140 (324)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHH-eEeC-CCC--CCHHHHhhhcchHHHHH-HHHHhcCC
Confidence            4678888899999999999999984     7999999999999 9999 998  554 4888999999996 45577889


Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFEN  157 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~  157 (270)
                      +++++++|+|++|++|++++++|+.+|++|+++++++++.+.++ ++|+++++++++. ++.+.+.+..++ ++|+++||
T Consensus       141 ~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~  218 (324)
T cd08244         141 TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTRP-DWPDQVREALGGGGVTVVLDG  218 (324)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHcCCCCceEEEEC
Confidence            99999999999999999999999999999999999999999997 8999888888876 788888877776 89999999


Q ss_pred             CCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHHCCceee
Q 042426          158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIKEGKLVY  236 (270)
Q Consensus       158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~  236 (270)
                      +|+.....++++++++|+++.+|..+..    . ...+....+.+++++.+...... +....+.+.++.+++.++.+.+
T Consensus       219 ~g~~~~~~~~~~l~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~  293 (324)
T cd08244         219 VGGAIGRAALALLAPGGRFLTYGWASGE----W-TALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVP  293 (324)
T ss_pred             CChHhHHHHHHHhccCcEEEEEecCCCC----C-CccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccC
Confidence            9998889999999999999999875421    1 13444556788888888776543 2334567888999999999987


Q ss_pred             eeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          237 VEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       237 ~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      .+...++++++++|++.+.+++..||+++++
T Consensus       294 ~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         294 VVGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            7778899999999999999999999999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=1.7e-32  Score=235.20  Aligned_cols=250  Identities=16%  Similarity=0.120  Sum_probs=196.3

Q ss_pred             ccceEEEEeecCCC-CCCCCCEEEec-------------------ccceeeEeecCC----ccceeccCCCCCccccccc
Q 042426            5 SGYGVSKVLDSTHP-NYKKDDLVWGL-------------------TSWEEFSLIQSP----QLLIKILDTSVPLPYYTGI   60 (270)
Q Consensus         5 ~g~g~v~~vG~~v~-~~~~Gd~V~~~-------------------g~~~~~~~v~~~----~~~~~~~p~~~~~~~~~a~   60 (270)
                      +++|+|.++|++|+ +|++||+|+..                   |+|+||++++++    . ++++ |++  ++++.|+
T Consensus        69 E~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~-~~~l-P~~--l~~~~aa  144 (410)
T cd08238          69 EFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQD-CLLI-YEG--DGYAEAS  144 (410)
T ss_pred             ccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCC-eEEC-CCC--CCHHHHh
Confidence            46788888999998 69999999762                   899999999987    6 8999 998  6654333


Q ss_pred             cCchhh---hHHHHh--------hhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHh-
Q 042426           61 LGMPGL---TAYGGL--------HELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC---YVVGSARSKEKVDLLKHKF-  125 (270)
Q Consensus        61 l~~~~~---ta~~~l--------~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~---~v~~~~~~~~~~~~~~~~~-  125 (270)
                      +..++.   +++.++        ...+++++|++|+|+|++|++|++++|+|+.+|+   +|+++++++++++.++ ++ 
T Consensus       145 l~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~~  223 (410)
T cd08238         145 LVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RLF  223 (410)
T ss_pred             hcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-Hhc
Confidence            332322   233332        2457889999999999889999999999999864   8999999999999998 65 


Q ss_pred             -------CCC-ceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccc
Q 042426          126 -------GFD-DAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHN  195 (270)
Q Consensus       126 -------g~~-~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  195 (270)
                             |++ .++++++..++.+.+++.+++ ++|++||++|. ..+..++++++++|+++.++.....   .....++
T Consensus       224 ~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~---~~~~~~~  300 (410)
T cd08238         224 PPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDK---NFSAPLN  300 (410)
T ss_pred             cccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCC---Ccccccc
Confidence                   665 467765422688888888777 89999999985 6889999999999988776432110   1112355


Q ss_pred             hHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426          196 LMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      ...++.+++++.|+....     .+.++++++++.+|++++  .++.+|+++++++|++.+. ++..||+|+.++
T Consensus       301 ~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~  369 (410)
T cd08238         301 FYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ  369 (410)
T ss_pred             HHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence            667888999999876543     467889999999999987  6788999999999999999 778899999864

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=2e-32  Score=231.61  Aligned_cols=245  Identities=20%  Similarity=0.202  Sum_probs=199.8

Q ss_pred             ccceEEEEeecCCCC------CCCCCEEEec-------------------------------------ccceeeEeecCC
Q 042426            5 SGYGVSKVLDSTHPN------YKKDDLVWGL-------------------------------------TSWEEFSLIQSP   41 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~------~~~Gd~V~~~-------------------------------------g~~~~~~~v~~~   41 (270)
                      +++|+|.++|+++++      |++||+|+++                                     |+|++|++++++
T Consensus        61 e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  140 (361)
T cd08231          61 EGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPG  140 (361)
T ss_pred             CCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCC
Confidence            567889999999986      9999999764                                     789999999986


Q ss_pred             -ccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH
Q 042426           42 -QLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKV  118 (270)
Q Consensus        42 -~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~  118 (270)
                       + ++++ |++  ++. ++++++++++|||+++.+...+++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.
T Consensus       141 ~~-~~~l-P~~--~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~  215 (361)
T cd08231         141 TA-IVRV-PDN--VPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERL  215 (361)
T ss_pred             Cc-eEEC-CCC--CCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence             7 9999 988  554 477777999999999987777779999999974 9999999999999999 999999999999


Q ss_pred             HHHHHHhCCCceeecCCchhH---HHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCc
Q 042426          119 DLLKHKFGFDDAFNYKEEPDL---DAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGV  193 (270)
Q Consensus       119 ~~~~~~~g~~~vi~~~~~~~~---~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  193 (270)
                      +.++ ++|++.++++++. ++   ...+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|....    .....
T Consensus       216 ~~~~-~~g~~~vi~~~~~-~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~  289 (361)
T cd08231         216 ELAR-EFGADATIDIDEL-PDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAP----AGTVP  289 (361)
T ss_pred             HHHH-HcCCCeEEcCccc-ccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCC----CCccc
Confidence            9988 8999888877654 33   3567777776 89999999986 578899999999999999987542    11122


Q ss_pred             cchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCC----ceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          194 HNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEG----KLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      ++...++.+++++.++...+     .+.++++++++.++    .+.+.+.++|+++++++|++.+.+++. +|+||+
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~  360 (361)
T cd08231         290 LDPERIVRKNLTIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVID  360 (361)
T ss_pred             cCHHHHhhcccEEEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeC
Confidence            44445678889988887543     34567777777776    344567788999999999999988774 799985

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3e-32  Score=229.74  Aligned_cols=243  Identities=20%  Similarity=0.230  Sum_probs=204.0

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec----------------------ccceeeEeecCCccceeccCCCCCccc-ccccc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL----------------------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGIL   61 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~----------------------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l   61 (270)
                      +++|+|.++|+++++|++||+|++.                      |++++|+.++++. ++++ |++  ++. +++++
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~~~a~l  159 (350)
T cd08274          84 DIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAEN-AYPV-NSP--LSDVELATF  159 (350)
T ss_pred             cceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHH-ceeC-CCC--CCHHHHHhc
Confidence            4678888899999999999999872                      7899999999999 9999 998  554 58899


Q ss_pred             CchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHH
Q 042426           62 GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDA  141 (270)
Q Consensus        62 ~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  141 (270)
                      ++++.|||+++ ..+++++|++++|+|++|++|++++++|+.+|++++++++++ +.+.++ ++|++.+++.... .+.+
T Consensus       160 ~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~  235 (350)
T cd08274         160 PCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGADTVILRDAP-LLAD  235 (350)
T ss_pred             ccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcCCeEEEeCCCc-cHHH
Confidence            99999999998 678899999999999999999999999999999999998665 788887 8998766555443 3433


Q ss_pred             HHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHH
Q 042426          142 ALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPK  220 (270)
Q Consensus       142 ~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (270)
                        .+.+.+ ++|++|||+|+..+..++++++++|+++.+|....     .....+...++.+++++.+.....     .+
T Consensus       236 --~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~  303 (350)
T cd08274         236 --AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAG-----PVVELDLRTLYLKDLTLFGSTLGT-----RE  303 (350)
T ss_pred             --HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCC-----ccccCCHHHhhhcceEEEEeecCC-----HH
Confidence              344444 89999999999889999999999999999986421     112345566677888888877643     56


Q ss_pred             HHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          221 FLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       221 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      .+.++.+++.++++.+.+...+++++++++++.+..++..+|+++++
T Consensus       304 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         304 VFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             HHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            78999999999999887778899999999999999888889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=8.8e-32  Score=230.23  Aligned_cols=250  Identities=20%  Similarity=0.236  Sum_probs=208.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|.++|++++.|++||+|++.                               |+|+||+++++++ ++++ |++  
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~-~~~v-P~~--  159 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQ-LMPK-PKH--  159 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHH-eEEC-CCC--
Confidence            4678888899999999999999762                               7899999999999 9999 998  


Q ss_pred             ccc-cccccCchhhhHHHHhhh--hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce
Q 042426           54 LPY-YTGILGMPGLTAYGGLHE--LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA  130 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~--~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v  130 (270)
                      ++. +++.++..+++||+++..  .+++.+|++++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|++.+
T Consensus       160 l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~g~~~~  238 (398)
T TIGR01751       160 LTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-ELGAEAV  238 (398)
T ss_pred             CCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCCEE
Confidence            555 478888899999999865  477899999999999999999999999999999999988999999998 7999888


Q ss_pred             eecCCc---------------------hhHHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEccccccccc
Q 042426          131 FNYKEE---------------------PDLDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIE  188 (270)
Q Consensus       131 i~~~~~---------------------~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  188 (270)
                      +|+++.                     ..+.+.+.+.+++ ++|++|||+|...+..++++++++|+++.+|.....   
T Consensus       239 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~---  315 (398)
T TIGR01751       239 IDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGY---  315 (398)
T ss_pred             ecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCC---
Confidence            886532                     0244566667765 899999999988889999999999999999885432   


Q ss_pred             CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426          189 KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                        ....+...+..++.++.+.....     .+.++++.++++++.+.+.+..++++++++++++.+.+++..||+|+++.
T Consensus       316 --~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  388 (398)
T TIGR01751       316 --NHDYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL  388 (398)
T ss_pred             --CCCcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence              12234455556677777665443     24467899999999999887789999999999999999999999999875


Q ss_pred             C
Q 042426          269 R  269 (270)
Q Consensus       269 ~  269 (270)
                      .
T Consensus       389 ~  389 (398)
T TIGR01751       389 A  389 (398)
T ss_pred             C
Confidence            3

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=3.7e-32  Score=226.63  Aligned_cols=251  Identities=24%  Similarity=0.305  Sum_probs=214.8

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      +++|.|.++|++++.+++||+|++.   |+|++|+.++.+. ++++ |++  ++. +++.++..+++||+++...+++.+
T Consensus        63 e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~l-p~~--~~~~~~a~~~~~~~ta~~~~~~~~~~~~  138 (323)
T cd05282          63 EGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADD-LIPV-PDS--ISDEQAAMLYINPLTAWLMLTEYLKLPP  138 (323)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEeCCCCcceeEEecCHHH-eEEC-CCC--CCHHHHHHHhccHHHHHHHHHHhccCCC
Confidence            5778888899999999999999986   7999999999999 9999 988  554 478888999999999988888999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g  159 (270)
                      |++++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|+++++++++. ++...+.+.+++ ++|+++||+|
T Consensus       139 ~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g  216 (323)
T cd05282         139 GDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVG  216 (323)
T ss_pred             CCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCCEEecccch-hHHHHHHHHhcCCCceEEEECCC
Confidence            999999999999999999999999999999999999999997 8999988888776 777888888776 8999999999


Q ss_pred             cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----ccchHHHHHHHHHHHHCCce
Q 042426          160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~  234 (270)
                      +......+++++++|+++.+|.....     ....+...+..+++++.+.....+     +....+.+.++.+++.++.+
T Consensus       217 ~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l  291 (323)
T cd05282         217 GESATRLARSLRPGGTLVNYGLLSGE-----PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVL  291 (323)
T ss_pred             CHHHHHHHHhhCCCCEEEEEccCCCC-----CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCc
Confidence            98888999999999999999875421     123344444448888888776543     23345678889999999999


Q ss_pred             eeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      .+.+...+++++++++++.+.+++..+|++++
T Consensus       292 ~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         292 TTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             ccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            88777889999999999999998888999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=3.6e-32  Score=229.47  Aligned_cols=240  Identities=18%  Similarity=0.180  Sum_probs=187.4

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec---------------------------------ccceeeEeecCCccceeccCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------TSWEEFSLIQSPQLLIKILDT   50 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------g~~~~~~~v~~~~~~~~~~p~   50 (270)
                      -+++|+|+++|++ +.|++||+|+..                                 |+|+||++++++. ++++ |+
T Consensus        63 ~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~-~~~~-P~  139 (355)
T cd08230          63 HEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEY-LVKV-PP  139 (355)
T ss_pred             cccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEecccc-EEEC-CC
Confidence            3577888889999 999999999741                                 7799999999999 9999 99


Q ss_pred             CCCccccccccCchhhhHHHHhhhh------cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHH
Q 042426           51 SVPLPYYTGILGMPGLTAYGGLHEL------CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR---SKEKVDLL  121 (270)
Q Consensus        51 ~~~~~~~~a~l~~~~~ta~~~l~~~------~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~---~~~~~~~~  121 (270)
                      +  ++ +++++..++.+++.++...      .+.++|++|+|+|+ |++|++++|+|+.+|++|+++++   ++++++.+
T Consensus       140 ~--~~-~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~  215 (355)
T cd08230         140 S--LA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIV  215 (355)
T ss_pred             C--CC-cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH
Confidence            9  55 5666667777666554322      23568999999986 99999999999999999999987   67889988


Q ss_pred             HHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccc----h
Q 042426          122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHN----L  196 (270)
Q Consensus       122 ~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~  196 (270)
                      + ++|++. +++.+. ++.+ . + ..+++|++|||+|.+ .+..++++++++|+++.+|.....    ....++    .
T Consensus       216 ~-~~Ga~~-v~~~~~-~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~  285 (355)
T cd08230         216 E-ELGATY-VNSSKT-PVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGG----REFEVDGGELN  285 (355)
T ss_pred             H-HcCCEE-ecCCcc-chhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCC----CccccChhhhh
Confidence            8 999986 566654 5544 2 1 223799999999974 789999999999999999975531    111122    3


Q ss_pred             HHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCc------eeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          197 MQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGK------LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ..++.+++++.|+...+     .+.++++++++.++.      +++.++++|+++|+++|++.+.++.  +|+||++
T Consensus       286 ~~~~~k~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         286 RDLVLGNKALVGSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             hhHhhcCcEEEEecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            45677899998876543     355777888888766      5667888999999999999987654  5999875

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-32  Score=225.94  Aligned_cols=255  Identities=22%  Similarity=0.287  Sum_probs=213.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      +++|.|.++|++++++++||+|+++   |+|++|++++.++ ++++ |++  ++. ++++++.++.+||+++...+.+++
T Consensus        65 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~~a~~~~~~~~ta~~~l~~~~~~~~  140 (334)
T PTZ00354         65 EVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGH-VMHI-PQG--YTFEEAAAIPEAFLTAWQLLKKHGDVKK  140 (334)
T ss_pred             eeEEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEEecHHH-cEeC-CCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            5678888899999999999999997   8999999999999 9999 998  555 478899999999999988789999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchh-HHHHHHhHcCC-CccEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPD-LDAALNRCFPE-GIDIYFENV  158 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~i~~~~~~-~~d~v~d~~  158 (270)
                      |++++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|++++++.... + +.+.+.+.+++ ++|++|||+
T Consensus       141 ~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~  218 (334)
T PTZ00354        141 GQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYPDE-EGFAPKVKKLTGEKGVNLVLDCV  218 (334)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHHHhCCCCceEEEECC
Confidence            999999999999999999999999999888998999999997 8999888887765 4 77888887766 899999999


Q ss_pred             CcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----ccchHHHHHHHHHHHHCCc
Q 042426          159 GGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       159 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~  233 (270)
                      ++..+..++++++++|+++.++.....    ....++...+..++.++.+......     +....+.++++.+++.++.
T Consensus       219 ~~~~~~~~~~~l~~~g~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (334)
T PTZ00354        219 GGSYLSETAEVLAVDGKWIVYGFMGGA----KVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGE  294 (334)
T ss_pred             chHHHHHHHHHhccCCeEEEEecCCCC----cccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCC
Confidence            988999999999999999998864321    1111445555666667777655432     1122345678889999999


Q ss_pred             eeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          234 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       234 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      +.+.+...+++++++++++.+.+++..+|+|+++.+
T Consensus       295 l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~  330 (334)
T PTZ00354        295 IKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE  330 (334)
T ss_pred             ccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            988777889999999999999988888999998865

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=8.3e-32  Score=225.42  Aligned_cols=240  Identities=20%  Similarity=0.256  Sum_probs=205.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|.++|+++++|++||+|++                               .|++++|+.++++. ++++ |++  
T Consensus        61 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~-~~~l-p~~--  136 (333)
T cd08296          61 EVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEA-LARI-PDD--  136 (333)
T ss_pred             ceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhh-eEeC-CCC--
Confidence            567888889999999999999975                               27899999999999 9999 998  


Q ss_pred             ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      ++. +++.+++++++||+++.. .+++++++|+|+| +|++|++++++|+.+|++|+++++++++.+.++ ++|++++++
T Consensus       137 ~~~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~  213 (333)
T cd08296         137 LDAAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYID  213 (333)
T ss_pred             CCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEec
Confidence            555 478899999999999865 4899999999999 699999999999999999999999999999997 899998998


Q ss_pred             cCCchhHHHHHHhHcCCCccEEEeCCC-cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426          133 YKEEPDLDAALNRCFPEGIDIYFENVG-GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      +.+. ++.+.+.+.  +++|+++|+.| ...+..++++++++|+++.+|....      ...++...++.+++++.+...
T Consensus       214 ~~~~-~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~  284 (333)
T cd08296         214 TSKE-DVAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPS  284 (333)
T ss_pred             CCCc-cHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCc
Confidence            8876 677777665  36999999986 4688899999999999999987541      123455667789999998875


Q ss_pred             cCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          212 GDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      ..     .+.+..+.+++.++.+++.+ ..++++++++|++.+.+++..||+|++
T Consensus       285 ~~-----~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         285 GT-----ALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             CC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            43     46678888899999988775 579999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=5.2e-32  Score=227.47  Aligned_cols=254  Identities=24%  Similarity=0.284  Sum_probs=211.3

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSP   78 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~   78 (270)
                      .+++|+|.++|++++.|++||+|++.    |+|++|+.++++. ++++ |++  ++. +++++++.++|||+++.....+
T Consensus        69 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~-~~~l-p~~--~~~~~aa~~~~~~~ta~~~l~~~~~~  144 (341)
T cd08290          69 NEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADD-LIKV-PND--VDPEQAATLSVNPCTAYRLLEDFVKL  144 (341)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHH-eEeC-CCC--CCHHHHHHhhccHHHHHHHHHhhccc
Confidence            36788899999999999999999986    8999999999999 9999 998  555 5888899999999999877889


Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHhCCCceeecCCc--hhHHHHHHhHcCCCcc
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK----EKVDLLKHKFGFDDAFNYKEE--PDLDAALNRCFPEGID  152 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~----~~~~~~~~~~g~~~vi~~~~~--~~~~~~i~~~~~~~~d  152 (270)
                      ++|++|+|+|++|++|++++|+|+..|++++++++++    ++.+.++ ++|+++++++++.  .++...+.+..++++|
T Consensus       145 ~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d  223 (341)
T cd08290         145 QPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEELRSLLATELLKSAPGGRPK  223 (341)
T ss_pred             CCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcccccccHHHHHHHHcCCCce
Confidence            9999999999999999999999999999999999776    6688887 8999988877652  1456666666555799


Q ss_pred             EEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----ccchHHHHHHHHH
Q 042426          153 IYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YHQYPKFLELVML  227 (270)
Q Consensus       153 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  227 (270)
                      ++|||+|+..+...+++++++|+++.+|.....     ....+....+.+++++.+......     +....+.+.++.+
T Consensus       224 ~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (341)
T cd08290         224 LALNCVGGKSATELARLLSPGGTMVTYGGMSGQ-----PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAE  298 (341)
T ss_pred             EEEECcCcHhHHHHHHHhCCCCEEEEEeccCCC-----CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHH
Confidence            999999998888899999999999999864321     122444456788899888776432     2233457888999


Q ss_pred             HHHCCceeeeeeeec---CcccHHHHHHHHhcCCccceEEEEe
Q 042426          228 AIKEGKLVYVEDIAE---GLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       228 ~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ++.+|.+.+....++   ++++++++++.+.+++..+|+|+++
T Consensus       299 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         299 LIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            999999988766677   9999999999999999999999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=1.4e-31  Score=227.52  Aligned_cols=251  Identities=17%  Similarity=0.174  Sum_probs=190.7

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe---------------------------------------c-ccceeeEeecCC--c
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG---------------------------------------L-TSWEEFSLIQSP--Q   42 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~---------------------------------------~-g~~~~~~~v~~~--~   42 (270)
                      |++|+|+++|++|++|++||||..                                       + |+|+||+++++.  +
T Consensus        68 E~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~  147 (393)
T TIGR02819        68 EITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFN  147 (393)
T ss_pred             eeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCc
Confidence            457778889999999999999943                                       1 789999999964  6


Q ss_pred             cceeccCCCCCcc---ccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEE-EEEeCCHHHH
Q 042426           43 LLIKILDTSVPLP---YYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYV-VGSARSKEKV  118 (270)
Q Consensus        43 ~~~~~~p~~~~~~---~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v-~~~~~~~~~~  118 (270)
                       ++++ |++++..   ..++++..+++++|+++. .+++++|++|+|.|+ |++|++++|+|+.+|+++ ++++++++++
T Consensus       148 -l~~v-P~~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~  223 (393)
T TIGR02819       148 -LLKF-PDRDQALEKIRDLTMLSDIFPTGYHGAV-TAGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARL  223 (393)
T ss_pred             -eEEC-CCcccccccccceeeeccHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence             9999 8874321   136788889999999984 578999999999765 999999999999999964 4455678899


Q ss_pred             HHHHHHhCCCceeecC-CchhHHHHHHhHcCC-CccEEEeCCCcc---------------hHHHHHHccccCCEEEEEcc
Q 042426          119 DLLKHKFGFDDAFNYK-EEPDLDAALNRCFPE-GIDIYFENVGGK---------------MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       119 ~~~~~~~g~~~vi~~~-~~~~~~~~i~~~~~~-~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +.++ ++|++. +++. +. ++.+.+.+.+.+ ++|++|||+|.+               .++.++++++++|+++.+|.
T Consensus       224 ~~a~-~~Ga~~-v~~~~~~-~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~  300 (393)
T TIGR02819       224 AQAR-SFGCET-VDLSKDA-TLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGL  300 (393)
T ss_pred             HHHH-HcCCeE-EecCCcc-cHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeee
Confidence            9998 899974 5554 33 677778877776 899999999974               79999999999999999998


Q ss_pred             cccccccC-------CCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eee-eecCcccHHHHH
Q 042426          182 ISQYNIEK-------PEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VED-IAEGLEKAPSAL  251 (270)
Q Consensus       182 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~-~~~~~~~~~~a~  251 (270)
                      ........       ....+.....+.++.++.+...     ...+++.++++++.+|++.+  .++ ++|+++++++|+
T Consensus       301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~-----~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~  375 (393)
T TIGR02819       301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQT-----PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGY  375 (393)
T ss_pred             cCCcccccccccccccccccchHHhhccCceEEeccC-----ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHH
Confidence            53111000       0111223344455556655221     11244578999999999875  345 689999999999


Q ss_pred             HHHhcCCccceEEEEec
Q 042426          252 VGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       252 ~~~~~~~~~gk~vv~~~  268 (270)
                      +.+.+++ .+|++++++
T Consensus       376 ~~~~~~~-~~Kvvi~~~  391 (393)
T TIGR02819       376 AEFDAGA-AKKFVIDPH  391 (393)
T ss_pred             HHHhhCC-ceEEEEeCC
Confidence            9998875 489999875

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=9.4e-32  Score=224.82  Aligned_cols=257  Identities=48%  Similarity=0.802  Sum_probs=210.3

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEecccceeeEeecC-CccceeccCCCCCccc-cc-cccCchhhhHHHHhhhhcCCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQS-PQLLIKILDTSVPLPY-YT-GILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~~~p~~~~~~~-~~-a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      .+++|+|.++|++  .|++||+|+++++|++|+.+++ +. ++++ |++++.++ ++ +++++++.|||+++...+++.+
T Consensus        70 ~e~~G~V~~~G~~--~~~~Gd~V~~~~~~~~~~~v~~~~~-~~~l-P~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~  145 (329)
T cd05288          70 GGGVGEVVESRSP--DFKVGDLVSGFLGWQEYAVVDGASG-LRKL-DPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKP  145 (329)
T ss_pred             CceEEEEEecCCC--CCCCCCEEecccceEEEEEecchhh-cEEC-CcccCCCHHHHHHhcccHHHHHHHHHHhccCCCC
Confidence            3678888888964  7999999999999999999999 99 9999 98843122 34 4499999999999988888999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +++++|+|++|++|++++|+++..|++|+++++++++.+.+++.+|+++++++++. ++.+.+.+.+++++|+++||+|+
T Consensus       146 ~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~v~~~~~~~~d~vi~~~g~  224 (329)
T cd05288         146 GETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGG  224 (329)
T ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCCh-hHHHHHHHhccCCceEEEEcchH
Confidence            99999999999999999999999999999999999999999833999888888876 78778877765589999999999


Q ss_pred             chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeee
Q 042426          161 KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI  240 (270)
Q Consensus       161 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  240 (270)
                      ..+..++++++++|+++.+|..............+....+.+++++.+...........+.+.++.+++.+|.+.+....
T Consensus       225 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~  304 (329)
T cd05288         225 EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDV  304 (329)
T ss_pred             HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccc
Confidence            89999999999999999998654321100000233455667888888876654332334678889999999999877667


Q ss_pred             ecCcccHHHHHHHHhcCCccceEEE
Q 042426          241 AEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       241 ~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      .+++++++++++.+.+++..||+++
T Consensus       305 ~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         305 VEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             cccHHHHHHHHHHHhcCCCccceeC
Confidence            7899999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=2e-31  Score=223.51  Aligned_cols=247  Identities=18%  Similarity=0.203  Sum_probs=200.9

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhc
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELC   76 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~   76 (270)
                      .+++|.|.++|++++.|++||+|+++      |+|++|++++++. ++++ |++  +++ +++++++++.|||+++....
T Consensus        64 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~~aa~~~~~~~ta~~~l~~~~  139 (336)
T TIGR02817        64 WDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERI-VGHK-PKS--LSFAEAAALPLTSITAWELLFDRL  139 (336)
T ss_pred             eeeEEEEEEeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHH-cccC-CCC--CCHHHHhhhhHHHHHHHHHHHHhc
Confidence            35778888999999999999999985      7899999999999 9999 998  555 58899999999999998888


Q ss_pred             CCCC-----CcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCC
Q 042426           77 SPKK-----GEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        77 ~~~~-----g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ++++     |++|||+|++|++|++++|+|+.+ |++|+++++++++.+.++ ++|+++++++..  ++.+.+.+...++
T Consensus       140 ~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~  216 (336)
T TIGR02817       140 GINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAHHVIDHSK--PLKAQLEKLGLEA  216 (336)
T ss_pred             CCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCCEEEECCC--CHHHHHHHhcCCC
Confidence            8887     999999999999999999999998 999999999999999997 899998888654  6777777754448


Q ss_pred             ccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC---c--ccch--HHHH
Q 042426          151 IDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD---F--YHQY--PKFL  222 (270)
Q Consensus       151 ~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~--~~~~  222 (270)
                      +|+++|++++ .....++++++++|+++.++...         ..+...+..+++++.+.....   .  +...  ...+
T Consensus       217 vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (336)
T TIGR02817       217 VSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLL  287 (336)
T ss_pred             CCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEEEEEeecccccchhhhhhhHHHH
Confidence            9999999854 68889999999999999874311         123333444556665533321   1  1111  2568


Q ss_pred             HHHHHHHHCCceeeeeeeec---CcccHHHHHHHHhcCCccceEEEE
Q 042426          223 ELVMLAIKEGKLVYVEDIAE---GLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       223 ~~~~~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      +++.+++.+|.+++.+...+   +++++++|++.+.+++..||++++
T Consensus       288 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       288 NRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            88999999999988765555   468999999999999989999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=3.4e-31  Score=222.45  Aligned_cols=242  Identities=23%  Similarity=0.272  Sum_probs=204.1

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|.++|+++..|++||+|+++                              |+|++|+.+++++ ++++ |++  +
T Consensus        64 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-P~~--l  139 (340)
T cd05284          64 ENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRR-LVKL-PRG--L  139 (340)
T ss_pred             ceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHH-eEEC-CCC--C
Confidence            4678888899999999999999863                              6899999999999 9999 998  5


Q ss_pred             cc-cccccCchhhhHHHHhhhh-cCCCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCcee
Q 042426           55 PY-YTGILGMPGLTAYGGLHEL-CSPKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDDAF  131 (270)
Q Consensus        55 ~~-~~a~l~~~~~ta~~~l~~~-~~~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~~vi  131 (270)
                      +. ++++++..+.|||+++... ..+.++++|+|+|+ +++|++++++|+.+| ++|+++++++++.+.++ ++|+++++
T Consensus       140 s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~  217 (340)
T cd05284         140 DPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVL  217 (340)
T ss_pred             CHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEE
Confidence            55 4899999999999999776 56888999999995 779999999999999 79999999999999997 99998888


Q ss_pred             ecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426          132 NYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF  209 (270)
Q Consensus       132 ~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (270)
                      ++++  .+...+.+..++ ++|+++||+|+ .....++++++++|+++.+|..+.       ...+....+.+++++.+.
T Consensus       218 ~~~~--~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~~~~~~~~~~~  288 (340)
T cd05284         218 NASD--DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDLVPTEISVIGS  288 (340)
T ss_pred             cCCc--cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHhhhcceEEEEE
Confidence            8776  367778777766 89999999996 688999999999999999986431       123334445788888877


Q ss_pred             cccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          210 LAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ....     .+.+.++.+++.+|.+.+.+ ..++++++++|++.+.+++..||+++.+
T Consensus       289 ~~~~-----~~~~~~~~~~l~~g~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         289 LWGT-----RAELVEVVALAESGKVKVEI-TKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             eccc-----HHHHHHHHHHHHhCCCCcce-EEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            6543     46788899999999988643 5789999999999999999999999763

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=9.3e-31  Score=219.89  Aligned_cols=245  Identities=22%  Similarity=0.266  Sum_probs=208.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|.++|++++.|++||+|++                               .|++++|+.++++. ++++ |++  
T Consensus        63 e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~-~~~l-p~~--  138 (341)
T cd08297          63 EGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARY-VTPI-PDG--  138 (341)
T ss_pred             ccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEecccc-EEEC-CCC--
Confidence            578899999999999999999975                               37899999999999 9999 998  


Q ss_pred             ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      ++. ++++++..++|||+++.. .+++++++++|+|+++++|++++++|+.+|++|+++++++++.+.++ ++|++++++
T Consensus       139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~  216 (341)
T cd08297         139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVD  216 (341)
T ss_pred             CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEc
Confidence            555 478899999999999865 58999999999999888999999999999999999999999999997 899998888


Q ss_pred             cCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426          133 YKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL  210 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (270)
                      +++. ++.+.+.+..++ ++|+++|+.++ .....++++++++|+++.+|..+.     .....+...+..+++++.+..
T Consensus       217 ~~~~-~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~  290 (341)
T cd08297         217 FKKS-DDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG-----GFIPLDPFDLVLRGITIVGSL  290 (341)
T ss_pred             CCCc-cHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC-----CCCCCCHHHHHhcccEEEEec
Confidence            8876 788888887765 89999997664 688899999999999999987542     112344555667888887754


Q ss_pred             ccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          211 AGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ...     .+.++++.+++.++.+.+.+ ..+++++++++++.+..++..||+++++
T Consensus       291 ~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         291 VGT-----RQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             cCC-----HHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            432     47788999999999998755 5789999999999999999999999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=6e-31  Score=220.08  Aligned_cols=248  Identities=24%  Similarity=0.233  Sum_probs=200.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe----------------------------------c-ccceeeEeecCCccceeccC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG----------------------------------L-TSWEEFSLIQSPQLLIKILD   49 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~----------------------------------~-g~~~~~~~v~~~~~~~~~~p   49 (270)
                      |++|+|.++| .++.+++||||..                                  + |+|+||+++|+++ ++++.|
T Consensus        62 E~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~-~~~~~p  139 (350)
T COG1063          62 EFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADF-NLAKLP  139 (350)
T ss_pred             cceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEecccc-CeecCC
Confidence            5677888899 7788999999931                                  1 6899999999877 555427


Q ss_pred             CCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC
Q 042426           50 TSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD  128 (270)
Q Consensus        50 ~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~  128 (270)
                      ++  ++.+.|+|..++++++++........++++++|+|+ |++|++++++++.+|+ +|++++.++++++.+++..|++
T Consensus       140 d~--~~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~  216 (350)
T COG1063         140 DG--IDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGAD  216 (350)
T ss_pred             CC--CChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCe
Confidence            77  455799999999999887545555666669999997 9999999999999998 8999999999999999347777


Q ss_pred             ceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhccee
Q 042426          129 DAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICM  206 (270)
Q Consensus       129 ~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (270)
                      .+++..+. +....+.+.+.+ ++|++|||+|.. .+..++++++++|+++.+|.....     ...++...++.+++++
T Consensus       217 ~~~~~~~~-~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~-----~~~~~~~~~~~kel~l  290 (350)
T COG1063         217 VVVNPSED-DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGE-----DIPLPAGLVVSKELTL  290 (350)
T ss_pred             EeecCccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCc-----cCccCHHHHHhcccEE
Confidence            66666554 677778888888 999999999974 789999999999999999986532     1146678889999999


Q ss_pred             eeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCc-cceEEEEe
Q 042426          207 EGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQN-VGKQLVAV  267 (270)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~  267 (270)
                      .|+....    ....++.+++++.+|++.+  .++..++++++++|++.+.+++. ..|+++++
T Consensus       291 ~gs~~~~----~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         291 RGSLRPS----GREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             EeccCCC----CcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            9984311    1356899999999999976  45677899999999999998654 56888763

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=6.7e-31  Score=219.67  Aligned_cols=254  Identities=31%  Similarity=0.526  Sum_probs=210.0

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec--ccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL--TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGE   82 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~   82 (270)
                      +++|+|..+|++++.|++||+|++.  |+|++|+.++++. ++++ |++  .. ++++++.++.+||+++.+.+++++|+
T Consensus        67 e~~G~v~~vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~-~~~i-p~~--~~-~~a~l~~~~~ta~~~l~~~~~~~~~~  141 (329)
T cd08250          67 EGVGEVVAVGEGVTDFKVGDAVATMSFGAFAEYQVVPARH-AVPV-PEL--KP-EVLPLLVSGLTASIALEEVGEMKSGE  141 (329)
T ss_pred             eeEEEEEEECCCCCCCCCCCEEEEecCcceeEEEEechHH-eEEC-CCC--cc-hhhhcccHHHHHHHHHHHhcCCCCCC
Confidence            4678888899999999999999987  8999999999999 9999 886  44 57889999999999998888999999


Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcch
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKM  162 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~  162 (270)
                      +++|+|++|++|++++++++..|++|+++++++++.+.++ ++|++.+++..+. ++.+.+.+..++++|++|||+|+..
T Consensus       142 ~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~vd~v~~~~g~~~  219 (329)
T cd08250         142 TVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEM  219 (329)
T ss_pred             EEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCCc-cHHHHHHHhcCCCCeEEEECCcHHH
Confidence            9999999999999999999999999999999999999997 8999888887765 6777776655458999999999988


Q ss_pred             HHHHHHccccCCEEEEEcccccccccC-----CCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeee
Q 042426          163 LDAVLLNMRICGHIAVCGMISQYNIEK-----PEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV  237 (270)
Q Consensus       163 ~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  237 (270)
                      +..++++++++|+++.+|.........     ..... ....+.+++++.+.....+.....+.+.++.+++.++.+.+.
T Consensus       220 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  298 (329)
T cd08250         220 FDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATL-PPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCE  298 (329)
T ss_pred             HHHHHHHhccCCeEEEEecccCCcccCcccccccccc-cHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeee
Confidence            999999999999999998754311000     00111 234567888888887654433345678889999999999874


Q ss_pred             e--eeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          238 E--DIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       238 ~--~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      +  ...++++++++|++.+.+++..+|++++
T Consensus       299 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         299 VDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             ECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            3  3458999999999999998888899874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.4e-31  Score=222.47  Aligned_cols=248  Identities=24%  Similarity=0.280  Sum_probs=209.1

Q ss_pred             cccceEEEEeecCCCC---CCCCCEEEe--------------------------------------------------c-
Q 042426            4 LSGYGVSKVLDSTHPN---YKKDDLVWG--------------------------------------------------L-   29 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~---~~~Gd~V~~--------------------------------------------------~-   29 (270)
                      .+++|+|..+|+++++   |++||+|++                                                  . 
T Consensus        59 ~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (367)
T cd08263          59 HEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYS  138 (367)
T ss_pred             cccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcccccc
Confidence            3678999999999988   999999987                                                  2 


Q ss_pred             -ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE
Q 042426           30 -TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY  107 (270)
Q Consensus        30 -g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~  107 (270)
                       |++++|+.++++. ++++ |++  +++ ++++++.+++|||.++...+.+.++++++|+| +|++|++++++|+.+|++
T Consensus       139 ~g~~~~~~~~~~~~-~~~~-P~~--is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~  213 (367)
T cd08263         139 MGGLAEYAVVPATA-LAPL-PES--LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGAS  213 (367)
T ss_pred             CCcceeEEEechhh-EEEC-CCC--CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCC
Confidence             7899999999999 9999 999  555 58999999999999998888889999999996 699999999999999997


Q ss_pred             -EEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEccccc
Q 042426          108 -VVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       108 -v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                       +++++.++++.+.++ ++|++.++++++. ++...+.+..++ ++|+++|++++. ....++++++++|+++.++..+.
T Consensus       214 ~vi~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~  291 (367)
T cd08263         214 PIIAVDVRDEKLAKAK-ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPG  291 (367)
T ss_pred             eEEEEeCCHHHHHHHH-HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCC
Confidence             998988999999987 8999889988876 788888877665 899999999987 88999999999999999986442


Q ss_pred             ccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCCccce
Q 042426          185 YNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGK  262 (270)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk  262 (270)
                      .    .....+...+..+++++.++....    ..+.++++.++++++.+.+.  +...+++++++++++.+++++..||
T Consensus       292 ~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~  363 (367)
T cd08263         292 G----ATAEIPITRLVRRGIKIIGSYGAR----PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGR  363 (367)
T ss_pred             C----CccccCHHHHhhCCeEEEecCCCC----cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccce
Confidence            1    122344455556788877743221    14678899999999998874  5578999999999999999998999


Q ss_pred             EEEE
Q 042426          263 QLVA  266 (270)
Q Consensus       263 ~vv~  266 (270)
                      +||+
T Consensus       364 ~~~~  367 (367)
T cd08263         364 AIVE  367 (367)
T ss_pred             eeeC
Confidence            9974

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=2.4e-31  Score=223.01  Aligned_cols=236  Identities=15%  Similarity=0.122  Sum_probs=179.1

Q ss_pred             CCcccceEEE---EeecCCCCCCCCCEEEec---------------------------ccceeeEeecCCccceeccCCC
Q 042426            2 QPLSGYGVSK---VLDSTHPNYKKDDLVWGL---------------------------TSWEEFSLIQSPQLLIKILDTS   51 (270)
Q Consensus         2 ~~i~g~g~v~---~vG~~v~~~~~Gd~V~~~---------------------------g~~~~~~~v~~~~~~~~~~p~~   51 (270)
                      |.++|++.++   ++|.  +.|++||+|+..                           |+|+||+++++++ ++++ |++
T Consensus        59 P~i~GhE~~G~V~~~g~--~~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~v-P~~  134 (341)
T cd08237          59 PMALIHEGIGVVVSDPT--GTYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDR-LVKL-PDN  134 (341)
T ss_pred             CeeccceeEEEEEeeCC--CccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHH-eEEC-CCC
Confidence            4565555554   4444  479999999742                           7899999999999 9999 999


Q ss_pred             CCccccccccCchhhhHHHHhhhh--cCCCCCcEEEEecCCchHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHHHHHhCC
Q 042426           52 VPLPYYTGILGMPGLTAYGGLHEL--CSPKKGEYVYVSAASGAVGQLVGQFVKL-VG-CYVVGSARSKEKVDLLKHKFGF  127 (270)
Q Consensus        52 ~~~~~~~a~l~~~~~ta~~~l~~~--~~~~~g~~vlI~ga~g~vG~~ai~la~~-~g-~~v~~~~~~~~~~~~~~~~~g~  127 (270)
                        ++++.|+++.+++++|+++...  ..+++|++|+|+|+ |++|++++|+++. .| .+|+++++++++++.++ +.+.
T Consensus       135 --l~~~~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~  210 (341)
T cd08237         135 --VDPEVAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADE  210 (341)
T ss_pred             --CChHHhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCc
Confidence              6655566778999999988543  35688999999996 9999999999986 55 58999999999999988 6665


Q ss_pred             CceeecCCchhHHHHHHhHcCCCccEEEeCCCc----chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhc
Q 042426          128 DDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG----KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKR  203 (270)
Q Consensus       128 ~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  203 (270)
                      ++.++     ++.+.      .++|++||++|+    ..+..++++++++|+++.+|....      ...++...++.++
T Consensus       211 ~~~~~-----~~~~~------~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~  273 (341)
T cd08237         211 TYLID-----DIPED------LAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEKG  273 (341)
T ss_pred             eeehh-----hhhhc------cCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhCc
Confidence            43221     11111      159999999995    368899999999999999987431      1235566778899


Q ss_pred             ceeeeccccCcccchHHHHHHHHHHHHCC-----ceeeeeeeecCcc---cHHHHHHHHhcCCccceEEEEec
Q 042426          204 ICMEGFLAGDFYHQYPKFLELVMLAIKEG-----KLVYVEDIAEGLE---KAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~---~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      +++.++....     .+.++++++++.++     .+++.++.+|+++   +++++++.+.++ ..||+||+++
T Consensus       274 ~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         274 LTLVGSSRST-----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             eEEEEecccC-----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence            9999876533     45688899999998     5777888889986   455555555444 6899999875

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1.3e-31  Score=221.44  Aligned_cols=228  Identities=14%  Similarity=0.169  Sum_probs=176.7

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe------------cccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHh
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG------------LTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGL   72 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------~g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l   72 (270)
                      +++|+|+++|+++ +|++||+|+.            .|+|+||++++++. ++++ |++  ++.+++.+ .++.|||+++
T Consensus        65 E~~G~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~-~~~i-p~~--~~~~~a~~-~~~~~a~~~~  138 (308)
T TIGR01202        65 ESVGRVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASR-VCRL-DPA--LGPQGALL-ALAATARHAV  138 (308)
T ss_pred             eeEEEEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHH-ceeC-CCC--CCHHHHhh-hHHHHHHHHH
Confidence            3566677789998 5999999984            48999999999999 9999 988  55444444 4578999998


Q ss_pred             hhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426           73 HELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        73 ~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      .+ . ..++++++|+|+ |++|++++|+|+.+|++ |+++..++++++.+. .+   .++|+.+  .        .++++
T Consensus       139 ~~-~-~~~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~~---~~i~~~~--~--------~~~g~  201 (308)
T TIGR01202       139 AG-A-EVKVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-GY---EVLDPEK--D--------PRRDY  201 (308)
T ss_pred             Hh-c-ccCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-hc---cccChhh--c--------cCCCC
Confidence            54 3 346889999985 99999999999999996 555555666666554 32   3454422  1        12379


Q ss_pred             cEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHH
Q 042426          152 DIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIK  230 (270)
Q Consensus       152 d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (270)
                      |++|||+|+. .++.++++++++|+++.+|....      ...++...++.+++++.++..+.     .+.++++++++.
T Consensus       202 Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~  270 (308)
T TIGR01202       202 RAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE------PVNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRELIE  270 (308)
T ss_pred             CEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC------CcccccchhhhcceEEEEecccc-----hhHHHHHHHHHH
Confidence            9999999985 68999999999999999997432      12344556677888888765433     467899999999


Q ss_pred             CCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          231 EGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       231 ~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      +|++.+  .++.+|+++|+++|++.+.++...+|++++
T Consensus       271 ~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       271 SGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             cCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            999876  577899999999999998877777899874

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.9e-31  Score=217.34  Aligned_cols=243  Identities=21%  Similarity=0.244  Sum_probs=201.4

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPK   79 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~   79 (270)
                      .+++|+|.++|++++.|++||+|+++   |+|++|+.+++++ ++++ |++  ++. +++++++.+.|||+++...... 
T Consensus        57 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~~a~~~~~~~~ta~~~~~~~~~~-  131 (305)
T cd08270          57 WDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGW-LAVL-PDG--VSFAQAATLPVAGVTALRALRRGGPL-  131 (305)
T ss_pred             ceeEEEEEEeCCCCCCCCCCCEEEEecCCcceeeEEEEchHH-eEEC-CCC--CCHHHHHHhHhHHHHHHHHHHHhCCC-
Confidence            45778888999999999999999986   8999999999999 9999 998  555 5889999999999999776655 


Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +|++++|+|++|++|++++++++.+|++|+.+++++++.+.++ ++|++..++...  +       ..++++|+++||+|
T Consensus       132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~-------~~~~~~d~vl~~~g  201 (305)
T cd08270         132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGAAEVVVGGS--E-------LSGAPVDLVVDSVG  201 (305)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEeccc--c-------ccCCCceEEEECCC
Confidence            5999999999999999999999999999999999999999998 799875543221  1       12236999999999


Q ss_pred             cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHh--hcceeeeccccCcccchHHHHHHHHHHHHCCceeee
Q 042426          160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVG--KRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV  237 (270)
Q Consensus       160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  237 (270)
                      +..+..++++++++|+++.+|....     .....+...+..  ++.++.++.... +....+.++.+.+++.++++.+.
T Consensus       202 ~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~  275 (305)
T cd08270         202 GPQLARALELLAPGGTVVSVGSSSG-----EPAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPR  275 (305)
T ss_pred             cHHHHHHHHHhcCCCEEEEEeccCC-----CcccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccce
Confidence            9888999999999999999987431     112233444443  578888777654 22345678899999999999987


Q ss_pred             eeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          238 EDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       238 ~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +..++++++++++++.+.+++..||+|+++
T Consensus       276 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         276 IGWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            778899999999999999999899999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=3.1e-31  Score=216.52  Aligned_cols=224  Identities=17%  Similarity=0.202  Sum_probs=181.9

Q ss_pred             ccceEEEEeecCCC------CCCCCCEEEe-------------------------------------cccceeeEeecCC
Q 042426            5 SGYGVSKVLDSTHP------NYKKDDLVWG-------------------------------------LTSWEEFSLIQSP   41 (270)
Q Consensus         5 ~g~g~v~~vG~~v~------~~~~Gd~V~~-------------------------------------~g~~~~~~~v~~~   41 (270)
                      |++|+|+++|++|+      +|++||||..                                     .|+|+||++++++
T Consensus         5 E~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~v~~~   84 (280)
T TIGR03366         5 EIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCHLPAG   84 (280)
T ss_pred             ccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEEecCC
Confidence            67899999999999      8999999953                                     1789999999987


Q ss_pred             -ccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHH
Q 042426           42 -QLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKV  118 (270)
Q Consensus        42 -~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~  118 (270)
                       + ++++ |++  +++ +++.+++.+.|+|+++.+ ....+|++|+|+|+ |++|++++|+|+.+|++ |++++++++++
T Consensus        85 ~~-~~~l-P~~--~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366        85 TA-IVPV-PDD--LPDAVAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR  158 (280)
T ss_pred             Cc-EEEC-CCC--CCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence             7 9999 999  555 478888899999999854 45669999999987 99999999999999995 88888899999


Q ss_pred             HHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccch
Q 042426          119 DLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL  196 (270)
Q Consensus       119 ~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  196 (270)
                      +.++ ++|+++++++.+   ..+.+.+.+.+ ++|++||++|.. .++.++++++++|+++.+|....    .....++.
T Consensus       159 ~~a~-~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~----~~~~~i~~  230 (280)
T TIGR03366       159 ELAL-SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFP----GGPVALDP  230 (280)
T ss_pred             HHHH-HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCC----CCceeeCH
Confidence            9998 999988887643   34455666665 899999999874 78899999999999999997431    11224567


Q ss_pred             HHHHhhcceeeeccccCcccchHHHHHHHHHHHHCC--cee--eeeeeecCcccH
Q 042426          197 MQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEG--KLV--YVEDIAEGLEKA  247 (270)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~--~~~~~~~~~~~~  247 (270)
                      ..++.+++++.|+....     .+.++++++++.++  ++.  +.++.+||++|+
T Consensus       231 ~~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       231 EQVVRRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             HHHHhCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            77888999999886543     46788999999875  333  457778888763

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=1.3e-30  Score=219.64  Aligned_cols=244  Identities=18%  Similarity=0.231  Sum_probs=205.0

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|.|.++|++++++++||+|+++                              |++++|+.++.++ ++++ |++  +
T Consensus        73 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~  148 (350)
T cd08240          73 EIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSR-YLVD-PGG--L  148 (350)
T ss_pred             ceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHH-eeeC-CCC--C
Confidence            4678888899999999999999863                              7899999999999 9999 998  5


Q ss_pred             cc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           55 PY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        55 ~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      ++ +++++++.++|||+++.....++++++|+|+| +|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.+++
T Consensus       149 s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~  226 (350)
T cd08240         149 DPALAATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAGADVVVN  226 (350)
T ss_pred             CHHHeehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCcEEec
Confidence            55 58889999999999998877777899999996 59999999999999999 7999998999999997 899988888


Q ss_pred             cCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426          133 YKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      .++. ++.+.+.+..++++|+++|++|. ..+..++++|+++|+++.+|.....      ...+......+++++.+...
T Consensus       227 ~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~  299 (350)
T cd08240         227 GSDP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALTIQGSYV  299 (350)
T ss_pred             CCCc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcEEEEccc
Confidence            7776 67677776655589999999985 6889999999999999999875421      11223334447788877766


Q ss_pred             cCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          212 GDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      ..     .+++.++.++++++.+.+.+...+++++++++++.+.+++..||++++
T Consensus       300 ~~-----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         300 GS-----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             CC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            54     367888999999999987766789999999999999999889999975

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=1.3e-30  Score=217.83  Aligned_cols=252  Identities=20%  Similarity=0.200  Sum_probs=203.7

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSP   78 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~   78 (270)
                      .+++|.|..+|++++.+++||+|++.    |+|++|+.++++. ++++ |++  +++ +++.++..+++||.++...+++
T Consensus        63 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~-~~~l-p~~--~~~~~~~~~~~~~~ta~~~l~~~~~~  138 (327)
T PRK10754         63 TEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADK-AAIL-PDA--ISFEQAAASFLKGLTVYYLLRKTYEI  138 (327)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHH-ceeC-CCC--CCHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            35678888999999999999999754    8999999999999 9999 988  555 4777888999999998888899


Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFEN  157 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~  157 (270)
                      ++|++++|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++++++.++. ++.+.+.+.+++ ++|+++||
T Consensus       139 ~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~  216 (327)
T PRK10754        139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDS  216 (327)
T ss_pred             CCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEEC
Confidence            99999999999999999999999999999999999999999997 8999888888776 788888888876 89999999


Q ss_pred             CCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcce-eeeccccCc---ccchHHHHHHHHHHHHCCc
Q 042426          158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRIC-MEGFLAGDF---YHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~g~  233 (270)
                      +|+.....++++++++|+++.+|....     .....+...+..++.. .........   +....+.+.++.+++.+|.
T Consensus       217 ~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  291 (327)
T PRK10754        217 VGKDTWEASLDCLQRRGLMVSFGNASG-----PVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGV  291 (327)
T ss_pred             CcHHHHHHHHHHhccCCEEEEEccCCC-----CCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCC
Confidence            998888999999999999999987542     1111222222222211 111111111   2233455677899999999


Q ss_pred             eeee--eeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          234 LVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       234 ~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      +++.  ....|++++++++++.+.+++..+|+|+.
T Consensus       292 l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        292 IKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             eeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence            9864  35789999999999999999999999985

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=1.5e-30  Score=220.27  Aligned_cols=248  Identities=22%  Similarity=0.340  Sum_probs=205.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe----------------------------------------------------cccc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG----------------------------------------------------LTSW   32 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~----------------------------------------------------~g~~   32 (270)
                      +++|+|.++|+++++|++||+|++                                                    .|+|
T Consensus        62 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  141 (365)
T cd08278          62 EGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSF  141 (365)
T ss_pred             ceeEEEEEeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccce
Confidence            577888999999999999999983                                                    1789


Q ss_pred             eeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEE
Q 042426           33 EEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVG  110 (270)
Q Consensus        33 ~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~  110 (270)
                      ++|+++++++ ++++ |++  ++. +++.++++++||+.++...+.++++++|+|+|+ |++|++++|+|+..|+ .+++
T Consensus       142 ~~y~~v~~~~-~~~i-P~~--~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~  216 (365)
T cd08278         142 ATYAVVHERN-VVKV-DKD--VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIA  216 (365)
T ss_pred             eeEEEecchh-EEEC-CCC--CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE
Confidence            9999999999 9999 999  555 488999999999999888889999999999975 9999999999999999 6888


Q ss_pred             EeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccC
Q 042426          111 SARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEK  189 (270)
Q Consensus       111 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  189 (270)
                      +++++++.+.++ ++|++.++++++. ++.+.+.+.+++++|+++||+|+ ..+..++++++++|+++.+|..+.    .
T Consensus       217 ~~~~~~k~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~  290 (365)
T cd08278         217 VDIVDSRLELAK-ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPP----G  290 (365)
T ss_pred             EeCCHHHHHHHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCC----C
Confidence            888999999887 8999988888776 77788887773389999999986 578999999999999999987531    1


Q ss_pred             CCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee-eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          190 PEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY-VEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      +....+...++.+++++.++.....  ...+.++++.++++++.+.+ .+...++++++++|++.+.+++.. |++++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         291 AEVTLDVNDLLVSGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             CccccCHHHHhhcCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence            2223555666678888887765432  22467888999999999854 244679999999999999887654 77763

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.3e-30  Score=217.80  Aligned_cols=248  Identities=20%  Similarity=0.243  Sum_probs=208.4

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCC--ccceeccCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSP--QLLIKILDTS   51 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~--~~~~~~~p~~   51 (270)
                      .+++|.|..+|++++.|++||+|++                              .|+|++|+++++.  + ++++ |++
T Consensus        60 ~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~i-P~~  137 (345)
T cd08260          60 HEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVN-LVRL-PDD  137 (345)
T ss_pred             cceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCc-eEEC-CCC
Confidence            3577888889999999999999986                              2889999999974  7 9999 999


Q ss_pred             CCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce
Q 042426           52 VPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA  130 (270)
Q Consensus        52 ~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v  130 (270)
                        ++. ++++++.+++|||+++...+++.++++++|+| +|++|++++++|+.+|++|+++++++++.+.++ ++|++++
T Consensus       138 --~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~  213 (345)
T cd08260         138 --VDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVAT  213 (345)
T ss_pred             --CCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEE
Confidence              554 48888999999999987788899999999999 699999999999999999999999999999997 8999989


Q ss_pred             eecCC-chhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeee
Q 042426          131 FNYKE-EPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEG  208 (270)
Q Consensus       131 i~~~~-~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (270)
                      +++++ . ++.+.+.+...+++|++|||+|+ ..+..++++++++|+++.+|......   .....+...+..+++++.+
T Consensus       214 i~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~---~~~~~~~~~~~~~~~~~~~  289 (345)
T cd08260         214 VNASEVE-DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEE---AGVALPMDRVVARELEIVG  289 (345)
T ss_pred             Eccccch-hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCC---CccccCHHHHhhcccEEEe
Confidence            98887 5 77777877765589999999985 67889999999999999998754321   1123445555577888887


Q ss_pred             ccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          209 FLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      .....     .+.++++.+++.++.+.+.  +...+++++++++++.+++++..||+|++
T Consensus       290 ~~~~~-----~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         290 SHGMP-----AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             CCcCC-----HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            66532     4678889999999998764  56788999999999999999999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.3e-30  Score=219.70  Aligned_cols=247  Identities=19%  Similarity=0.201  Sum_probs=197.7

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe---------------------------------cccceeeEeecCC--ccceeccC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG---------------------------------LTSWEEFSLIQSP--QLLIKILD   49 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~~~p   49 (270)
                      +++|+|.++|+++++|++||+|++                                 .|+|+||+.++.+  . ++++ |
T Consensus        60 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~-~~~l-P  137 (351)
T cd08285          60 EAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADAN-LAPL-P  137 (351)
T ss_pred             ceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCc-eEEC-C
Confidence            567888889999999999999986                                 2789999999974  7 9999 9


Q ss_pred             CCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC
Q 042426           50 TSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF  127 (270)
Q Consensus        50 ~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~  127 (270)
                      ++  ++. +++.++.++.|||+++ ..+++++|++|||+| +|++|++++|+|+.+|+ .++++++++++.+.++ ++|+
T Consensus       138 ~~--~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~  212 (351)
T cd08285         138 DG--LTDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGA  212 (351)
T ss_pred             CC--CCHHHhhhhccchhhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCC
Confidence            88  555 4788888999999996 678899999999997 59999999999999999 5888888888998888 8999


Q ss_pred             CceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccch--HHHHhhc
Q 042426          128 DDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL--MQVVGKR  203 (270)
Q Consensus       128 ~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~  203 (270)
                      ++++++++. ++.+.+.+...+ ++|+++||+|+ ..+..++++++++|+++.+|.....    .....+.  .....+.
T Consensus       213 ~~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~  287 (351)
T cd08285         213 TDIVDYKNG-DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGED----DYLPIPREEWGVGMGH  287 (351)
T ss_pred             ceEecCCCC-CHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC----ceeecChhhhhhhccc
Confidence            999988876 788888877766 89999999997 5789999999999999999875421    1111111  1112234


Q ss_pred             ceeeeccccCcccchHHHHHHHHHHHHCCceee---eeeeecCcccHHHHHHHHhcCC-ccceEEEEe
Q 042426          204 ICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY---VEDIAEGLEKAPSALVGIFTGQ-NVGKQLVAV  267 (270)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~  267 (270)
                      .++.+....    ...+.++++.+++++|++++   .+...++++++++|++.+++++ ...|++|++
T Consensus       288 ~~i~~~~~~----~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         288 KTINGGLCP----GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             cEEEEeecC----CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            444433221    12366888999999999988   3445689999999999999987 468999874

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.98  E-value=4.2e-30  Score=213.48  Aligned_cols=252  Identities=25%  Similarity=0.346  Sum_probs=211.7

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPK   79 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~   79 (270)
                      .+++|.|..+|+++++|++||+|+++   |++++|+.++++. ++++ |++  ++. ++++++..++++|+++...++++
T Consensus        60 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~~~~~~~~~~~a~~~l~~~~~~~  135 (320)
T cd05286          60 VEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASR-LVKL-PDG--ISDETAAALLLQGLTAHYLLRETYPVK  135 (320)
T ss_pred             cceeEEEEEECCCCCCCCCCCEEEEecCCCceeEEEEecHHH-ceeC-CCC--CCHHHHhhccchHHHHHHHHHHhcCCC
Confidence            35678888899999999999999985   7999999999999 9999 988  554 47888999999999998888999


Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~  158 (270)
                      +|++++|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++++++..+. ++.+.+.+.+.+ ++|+++||+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~  213 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGV  213 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCch-hHHHHHHHHcCCCCeeEEEECC
Confidence            9999999999999999999999999999999999999999997 8999888887776 787888887766 899999999


Q ss_pred             CcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc---ccchHHHHHHHHHHHHCCcee
Q 042426          159 GGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF---YHQYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       159 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~  235 (270)
                      ++.....++++++++|+++.+|....     .....+...+..+++++.+.....+   +....+.+.++.+++.++.+.
T Consensus       214 ~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (320)
T cd05286         214 GKDTFEGSLDSLRPRGTLVSFGNASG-----PVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLK  288 (320)
T ss_pred             CcHhHHHHHHhhccCcEEEEEecCCC-----CCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCc
Confidence            98888999999999999999987442     1122334444477888765544332   233446677889999999988


Q ss_pred             eeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          236 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       236 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      +.....|++++++++++.+.+++..+|++++
T Consensus       289 ~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  319 (320)
T cd05286         289 VEIGKRYPLADAAQAHRDLESRKTTGKLLLI  319 (320)
T ss_pred             CcccceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            7766789999999999999998888999985

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=99.98  E-value=2.6e-30  Score=217.65  Aligned_cols=244  Identities=23%  Similarity=0.191  Sum_probs=201.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-------------------------------c--ccceeeEeecCC--ccceeccC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------L--TSWEEFSLIQSP--QLLIKILD   49 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~--g~~~~~~~v~~~--~~~~~~~p   49 (270)
                      +++|+|.++|+++++|++||+|++                               .  |+|++|++++++  + ++++ |
T Consensus        61 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-P  138 (347)
T cd05278          61 EFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMN-LAKI-P  138 (347)
T ss_pred             ceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCe-EEEC-C
Confidence            567888889999999999999986                               2  789999999987  7 9999 9


Q ss_pred             CCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC
Q 042426           50 TSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF  127 (270)
Q Consensus        50 ~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~  127 (270)
                      ++  ++. ++++++.+++|||+++ ...+++++++|+|.|+ |++|++++|+|+.+|+ +++++.+++++.+.++ ++|+
T Consensus       139 ~~--~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~  213 (347)
T cd05278         139 DG--LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGA  213 (347)
T ss_pred             CC--CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCC
Confidence            98  555 4888999999999998 6788999999999765 9999999999999997 8989888888888888 8999


Q ss_pred             CceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcce
Q 042426          128 DDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRIC  205 (270)
Q Consensus       128 ~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  205 (270)
                      +.++++++. ++.+.+.+.+++ ++|++||++++ ..+..++++++++|+++.+|.....     .........+.++++
T Consensus       214 ~~vi~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~  287 (347)
T cd05278         214 TDIINPKNG-DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKP-----DPLPLLGEWFGKNLT  287 (347)
T ss_pred             cEEEcCCcc-hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCC-----cccCccchhhhceeE
Confidence            889988876 788888887765 89999999987 6889999999999999999854321     100112233467777


Q ss_pred             eeeccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCCc-cceEEEE
Q 042426          206 MEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQN-VGKQLVA  266 (270)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~  266 (270)
                      +.+.....     .+.++++.+++.++.+.+.  +...+++++++++++.+.+++. .+|+|++
T Consensus       288 ~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         288 FKTGLVPV-----RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             EEeeccCc-----hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence            77654322     5678899999999999864  4578899999999999988776 7899875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.98  E-value=3.4e-30  Score=214.41  Aligned_cols=247  Identities=21%  Similarity=0.267  Sum_probs=201.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhh
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHE   74 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~   74 (270)
                      +++|.|.++|+  ..+++||+|+++         |+|++|+.++++. ++++ |++  +++ ++++++.++++||.++.+
T Consensus        63 e~~G~v~~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~--~~~~~aa~~~~~~~ta~~~l~~  136 (320)
T cd08243          63 EAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQ-VYAI-DSD--LSWAELAALPETYYTAWGSLFR  136 (320)
T ss_pred             eeEEEEEEecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHH-cEeC-CCC--CCHHHHHhcchHHHHHHHHHHH
Confidence            57788888995  579999999986         7899999999999 9999 988  555 489999999999999988


Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEE
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      ..++++|++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++. .. ++.+.+.+. ++++|++
T Consensus       137 ~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~~-~~~~~i~~~-~~~~d~v  212 (320)
T cd08243         137 SLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID-DG-AIAEQLRAA-PGGFDKV  212 (320)
T ss_pred             hcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-Cc-cHHHHHHHh-CCCceEE
Confidence            888999999999999999999999999999999999999999999997 8999877654 44 677777777 4489999


Q ss_pred             EeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCce
Q 042426          155 FENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       155 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  234 (270)
                      +||+|+..+..++++++++|+++.+|.............. ....+.+++++.+......   ..+.++++.+++.++.+
T Consensus       213 l~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  288 (320)
T cd08243         213 LELVGTATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPM-DDIPSGVNLTLTGSSSGDV---PQTPLQELFDFVAAGHL  288 (320)
T ss_pred             EECCChHHHHHHHHHhccCCEEEEEccCCCCcccCCcchh-hhhhhccceEEEecchhhh---hHHHHHHHHHHHHCCce
Confidence            9999998899999999999999999874321100010011 1111356677766654332   13568889999999999


Q ss_pred             eeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      ++.+...++++++++|++.+.+++..+|+++
T Consensus       289 ~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         289 DIPPSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             ecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            8876688999999999999999888889886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.98  E-value=1.6e-31  Score=237.19  Aligned_cols=241  Identities=20%  Similarity=0.229  Sum_probs=211.4

Q ss_pred             CCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHH
Q 042426           20 YKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQ   95 (270)
Q Consensus        20 ~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~   95 (270)
                      -+-|.|||++   -++++.+.++.++ +|.+ |..  +.. +|++.|+.|.|+|++|..+++.++|++||||+++||+|+
T Consensus      1492 d~~GrRvM~mvpAksLATt~l~~rd~-lWev-P~~--WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQ 1567 (2376)
T KOG1202|consen 1492 DASGRRVMGMVPAKSLATTVLASRDF-LWEV-PSK--WTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQ 1567 (2376)
T ss_pred             cCCCcEEEEeeehhhhhhhhhcchhh-hhhC-Ccc--cchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhH
Confidence            4678999998   6899999999999 9999 988  666 599999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---CceeecCCchhHHHHHHhHcCC-CccEEEeCCCcchHHHHHHccc
Q 042426           96 LVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF---DDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMR  171 (270)
Q Consensus        96 ~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~  171 (270)
                      ++|.+|-..|++|+.++.|.++++++.++|..   .+.-|.++. +|..-+.+.+.| |+|+|++....+.++.+++||+
T Consensus      1568 AAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa 1646 (2376)
T KOG1202|consen 1568 AAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLA 1646 (2376)
T ss_pred             HHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHH
Confidence            99999999999999999999999999977764   456677776 999999999999 9999999999999999999999


Q ss_pred             cCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHH----HCCceeeeeeeecCcccH
Q 042426          172 ICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAI----KEGKLVYVEDIAEGLEKA  247 (270)
Q Consensus       172 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~  247 (270)
                      .+||+..+|..+-     ......--..+.+|.+++|.-+..+.+...+.+.++..++    ++|.++|+.+.+|+-+++
T Consensus      1647 ~~GRFLEIGKfDL-----SqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qv 1721 (2376)
T KOG1202|consen 1647 LHGRFLEIGKFDL-----SQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQV 1721 (2376)
T ss_pred             hcCeeeeecceec-----ccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHH
Confidence            9999999997553     2222334467889999999999888666666676666655    556889999999999999


Q ss_pred             HHHHHHHhcCCccceEEEEecCC
Q 042426          248 PSALVGIFTGQNVGKQLVAVARE  270 (270)
Q Consensus       248 ~~a~~~~~~~~~~gk~vv~~~~~  270 (270)
                      ++||+.|.+++.+||+|+++-+|
T Consensus      1722 E~AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1722 EDAFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred             HHHHHHHhccCccceEEEEEccc
Confidence            99999999999999999998543

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.98  E-value=6.6e-30  Score=217.74  Aligned_cols=246  Identities=21%  Similarity=0.212  Sum_probs=202.6

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEe--------------------------------------------------cccce
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWG--------------------------------------------------LTSWE   33 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~--------------------------------------------------~g~~~   33 (270)
                      .+++|+|.++|+++++|++||+|++                                                  .|+|+
T Consensus        60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  139 (386)
T cd08283          60 HEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQA  139 (386)
T ss_pred             ccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeE
Confidence            3678899999999999999999975                                                  26889


Q ss_pred             eeEeecCC--ccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEE
Q 042426           34 EFSLIQSP--QLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVV  109 (270)
Q Consensus        34 ~~~~v~~~--~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~  109 (270)
                      +|++++++  . ++++ |++  ++. ++++++..++|||+++ ..+++++|++|+|+|+ |++|++++++|+.+|+ +|+
T Consensus       140 ~~~~v~~~~~~-~~~l-p~~--~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi  213 (386)
T cd08283         140 EYVRVPFADVG-PFKI-PDD--LSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVI  213 (386)
T ss_pred             EEEEcccccCe-EEEC-CCC--CCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEE
Confidence            99999988  7 9999 998  665 4888899999999999 7889999999999974 9999999999999998 699


Q ss_pred             EEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc----------------------hHHHH
Q 042426          110 GSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK----------------------MLDAV  166 (270)
Q Consensus       110 ~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~----------------------~~~~~  166 (270)
                      ++++++++.+.++ +++...++++.+.+++.+.+.+.+++ ++|++|||+|+.                      .+..+
T Consensus       214 ~~~~~~~~~~~~~-~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (386)
T cd08283         214 AIDRVPERLEMAR-SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREA  292 (386)
T ss_pred             EEcCCHHHHHHHH-HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHH
Confidence            9999999999998 66333577776641377888887776 899999999753                      57889


Q ss_pred             HHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeee--eeeecCc
Q 042426          167 LLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGL  244 (270)
Q Consensus       167 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~  244 (270)
                      +++++++|+++.+|....     .....+....+.+++++.+....     ..+.++++.+++.++++.+.  +...+++
T Consensus       293 ~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~~~~~~~l  362 (386)
T cd08283         293 IQAVRKGGTVSIIGVYGG-----TVNKFPIGAAMNKGLTLRMGQTH-----VQRYLPRLLELIESGELDPSFIITHRLPL  362 (386)
T ss_pred             HHHhccCCEEEEEcCCCC-----CcCccCHHHHHhCCcEEEeccCC-----chHHHHHHHHHHHcCCCChhHceEEEecH
Confidence            999999999999987542     12234455667888888886532     25678889999999999863  5578999


Q ss_pred             ccHHHHHHHHhcCC-ccceEEEE
Q 042426          245 EKAPSALVGIFTGQ-NVGKQLVA  266 (270)
Q Consensus       245 ~~~~~a~~~~~~~~-~~gk~vv~  266 (270)
                      +++++|++.+.++. ..+|++++
T Consensus       363 ~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         363 EDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             HHHHHHHHHHHhCCCCeEEEEec
Confidence            99999999998876 56899985

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.98  E-value=9.5e-30  Score=213.41  Aligned_cols=243  Identities=17%  Similarity=0.177  Sum_probs=202.1

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      .+++|+|..+|++++.|++||+|++                              .|+|++|+.++++  ++++ |++  
T Consensus        59 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~-p~~--  133 (337)
T cd08261          59 HELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD--ALLV-PEG--  133 (337)
T ss_pred             cccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh--eEEC-CCC--
Confidence            3567899999999999999999986                              3789999999987  8899 999  


Q ss_pred             cccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      ++++ ++++ ..++++++++ ...++.+|++|||+| +|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++
T Consensus       134 ~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~  209 (337)
T cd08261         134 LSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTIN  209 (337)
T ss_pred             CCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEec
Confidence            5554 5555 5778888887 778999999999996 599999999999999999999998999999997 899999999


Q ss_pred             cCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426          133 YKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL  210 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (270)
                      +++. ++.+.+.+.+++ ++|+++||+|+ ..+..++++++++|+++.+|....      ....+...+..+++++.+..
T Consensus       210 ~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~------~~~~~~~~~~~~~~~~~~~~  282 (337)
T cd08261         210 VGDE-DVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG------PVTFPDPEFHKKELTILGSR  282 (337)
T ss_pred             Cccc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC------CCccCHHHHHhCCCEEEEec
Confidence            8887 788888887776 89999999976 578899999999999999886441      11233445555677776653


Q ss_pred             ccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcC-CccceEEEEe
Q 042426          211 AGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTG-QNVGKQLVAV  267 (270)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~~  267 (270)
                      .     ...+.++++.+++.+|.+++  .+..++++++++++++.+.++ ...+|+|+++
T Consensus       283 ~-----~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         283 N-----ATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             c-----CChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            2     23567888999999999987  666889999999999999988 4789999874

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08251 polyketide_synthase polyketide synthase

Probab=99.98  E-value=3.2e-30  Score=212.84  Aligned_cols=249  Identities=19%  Similarity=0.258  Sum_probs=205.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSP   78 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~   78 (270)
                      +++|.|.++|+++++|++||+|+++     |+|++|+.++++. ++++ |++  ++. ++++++..+++||+++ +..++
T Consensus        44 e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~aa~~~~~~~ta~~~l-~~~~~  118 (303)
T cd08251          44 EASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVPEDQ-VVRK-PAS--LSFEEACALPVVFLTVIDAF-ARAGL  118 (303)
T ss_pred             eeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEEccHHH-eEEC-CCC--CCHHHHHHhHHHHHHHHHHH-HhcCC
Confidence            5678888899999999999999986     7999999999999 9999 998  555 4888999999999998 47899


Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFEN  157 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~  157 (270)
                      ++|++++|+++++++|++++|+++.+|++|+++++++++.+.++ ++|++.+++.... ++.+.+.+.+++ ++|+++|+
T Consensus       119 ~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~  196 (303)
T cd08251         119 AKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINT  196 (303)
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHcCCCCceEEEEC
Confidence            99999999999999999999999999999999999999999997 8999888888776 788888888776 89999999


Q ss_pred             CCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc----ccchHHHHHHHHHHHHCCc
Q 042426          158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF----YHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~  233 (270)
                      +++.....++++++++|+++.+|..+..    ........ .+.+++.+....+...    +....+.+.++.+++.+|.
T Consensus       197 ~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  271 (303)
T cd08251         197 LSGEAIQKGLNCLAPGGRYVEIAMTALK----SAPSVDLS-VLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGE  271 (303)
T ss_pred             CcHHHHHHHHHHhccCcEEEEEeccCCC----ccCccChh-HhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCC
Confidence            9888889999999999999998764321    11112222 2334444443333221    2234567888999999999


Q ss_pred             eeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          234 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       234 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      +.+.....+++++++++++.+.+++..+|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         272 LRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             ccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            98877788999999999999999888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=5.9e-30  Score=215.00  Aligned_cols=244  Identities=20%  Similarity=0.184  Sum_probs=193.3

Q ss_pred             cccceEEEEeecCCCC-CCCCCEEEec--------------------ccceeeEeecCCccceeccCCCCCccccccccC
Q 042426            4 LSGYGVSKVLDSTHPN-YKKDDLVWGL--------------------TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILG   62 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~-~~~Gd~V~~~--------------------g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~   62 (270)
                      .+++|+|.++|+++++ |++||+|+++                    |+|++|++++++. ++++ |++  ++.+.++++
T Consensus        69 ~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~--~s~~~a~~~  144 (341)
T cd08262          69 HEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEAL-LLRV-PDG--LSMEDAALT  144 (341)
T ss_pred             cceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHH-eEEC-CCC--CCHHHhhhh
Confidence            3468999999999997 9999999974                    8999999999999 9999 998  555444477


Q ss_pred             chhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceeecCCchhHHH
Q 042426           63 MPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDA  141 (270)
Q Consensus        63 ~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  141 (270)
                      .++++||+++ ..+++++|++|+|+|+ |++|++++|+|+.+|++ ++++++++++.+.++ ++|+++++++++. +..+
T Consensus       145 ~~~~~a~~~~-~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~  220 (341)
T cd08262         145 EPLAVGLHAV-RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAAD-SPFA  220 (341)
T ss_pred             hhHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCc-CHHH
Confidence            8889999986 7789999999999975 99999999999999996 666677888888887 8999888887654 3222


Q ss_pred             ---HHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCccc
Q 042426          142 ---ALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYH  216 (270)
Q Consensus       142 ---~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (270)
                         .+.+...+ ++|+++|++|+ ..+..++++++++|+++.+|.....    .  .........+++++.+.....   
T Consensus       221 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~----~--~~~~~~~~~~~~~~~~~~~~~---  291 (341)
T cd08262         221 AWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES----D--NIEPALAIRKELTLQFSLGYT---  291 (341)
T ss_pred             HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----C--ccCHHHHhhcceEEEEEeccc---
Confidence               23344444 89999999998 4788899999999999999875321    1  122222244666666443222   


Q ss_pred             chHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          217 QYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       217 ~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                        .+.+.++.+++.+|.+.+  .+...+++++++++++.+.+++..+|+|++
T Consensus       292 --~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         292 --PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             --HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence              457888999999999875  346789999999999999999999999974

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.97  E-value=1e-29  Score=213.28  Aligned_cols=243  Identities=20%  Similarity=0.261  Sum_probs=201.0

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|.++|++++.|++||+|++                               .|++++|+.++.+. ++++ |++  
T Consensus        60 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~--  135 (338)
T PRK09422         60 EGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADY-AVKV-PEG--  135 (338)
T ss_pred             ccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHH-eEeC-CCC--
Confidence            578889899999999999999985                               37899999999999 9999 999  


Q ss_pred             ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHhCCCcee
Q 042426           54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKL-VGCYVVGSARSKEKVDLLKHKFGFDDAF  131 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~-~g~~v~~~~~~~~~~~~~~~~~g~~~vi  131 (270)
                      +++ ++++++.+++|||+++ ..+++++|++++|+| +|++|++++++|+. .|++|+++++++++.+.++ ++|++.++
T Consensus       136 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~  212 (338)
T PRK09422        136 LDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTI  212 (338)
T ss_pred             CCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEe
Confidence            555 5889999999999998 678899999999999 59999999999998 4999999999999999997 89998888


Q ss_pred             ecCC-chhHHHHHHhHcCCCcc-EEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426          132 NYKE-EPDLDAALNRCFPEGID-IYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF  209 (270)
Q Consensus       132 ~~~~-~~~~~~~i~~~~~~~~d-~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (270)
                      +++. . ++.+.+.+..+ ++| +++++.++..+..++++++++|+++.+|....      ....+......++..+.++
T Consensus       213 ~~~~~~-~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~  284 (338)
T PRK09422        213 NSKRVE-DVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVLDGIEVVGS  284 (338)
T ss_pred             cccccc-cHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhhcCcEEEEe
Confidence            8764 4 66777777665 688 55565666788999999999999999986431      1123444555567777665


Q ss_pred             cccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426          210 LAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      ....     .+.++++.+++++|.+.+.+. .+++++++++++.+.+++..||+++++.
T Consensus       285 ~~~~-----~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        285 LVGT-----RQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             cCCC-----HHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence            4322     467888999999999877654 5799999999999999999999998763

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.97  E-value=9.8e-30  Score=215.25  Aligned_cols=248  Identities=22%  Similarity=0.304  Sum_probs=204.9

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEe--------------------------------------------------cccce
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWG--------------------------------------------------LTSWE   33 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~--------------------------------------------------~g~~~   33 (270)
                      .+++|+|..+|++++.|++||+|++                                                  .|+|+
T Consensus        59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  138 (363)
T cd08279          59 HEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFA  138 (363)
T ss_pred             ccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccce
Confidence            3567889999999999999999987                                                  27899


Q ss_pred             eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEE
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGS  111 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~  111 (270)
                      +|++++++. ++++ |++  ++. +++.+++++++||.++...+++.++++|+|+| .|++|++++++|+.+|++ |+++
T Consensus       139 ~~~~~~~~~-~~~l-p~~--~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~  213 (363)
T cd08279         139 EYTVVPEAS-VVKI-DDD--IPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAV  213 (363)
T ss_pred             eeEEecccc-EEEC-CCC--CChHHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEE
Confidence            999999999 9999 998  554 58888999999999988889999999999996 499999999999999995 9999


Q ss_pred             eCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccC
Q 042426          112 ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEK  189 (270)
Q Consensus       112 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  189 (270)
                      ++++++.+.++ ++|++++++++.. ++...+.+..++ ++|+++|++++ ..+..++++++++|+++.+|....    .
T Consensus       214 ~~~~~~~~~~~-~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----~  287 (363)
T cd08279         214 DPVPEKLELAR-RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP----G  287 (363)
T ss_pred             cCCHHHHHHHH-HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC----C
Confidence            98999999887 8999888888876 788888877755 89999999995 578999999999999999976442    1


Q ss_pred             CCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEE
Q 042426          190 PEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQL  264 (270)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~v  264 (270)
                      ....++...+..++.++.+......  ...+.++++.+++.++.+.+  .+.++++++++++|++.+.+++..+.++
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         288 ETVSLPALELFLSEKRLQGSLYGSA--NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             cccccCHHHHhhcCcEEEEEEecCc--CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            1223445555556766666544321  23577899999999999876  3667899999999999999888765554

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.97  E-value=6.2e-30  Score=213.45  Aligned_cols=248  Identities=19%  Similarity=0.295  Sum_probs=195.8

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhh
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHE   74 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~   74 (270)
                      +++|.|.++  +++.|++||+|++.         |+|++|+.++++. ++++ |++  +++ +++.+++.+.+||.++..
T Consensus        64 e~~G~v~~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~-~~~l-p~~--~~~~~aa~~~~~~~ta~~~l~~  137 (325)
T cd05280          64 DAAGTVVSS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADW-VVPL-PEG--LSLREAMILGTAGFTAALSVHR  137 (325)
T ss_pred             ccEEEEEEe--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhh-EEEC-CCC--CCHHHHHhhHHHHHHHHHHHHH
Confidence            467777777  56789999999973         7999999999999 9999 998  555 588999999999999866


Q ss_pred             hcCC--C-CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426           75 LCSP--K-KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        75 ~~~~--~-~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      ..+.  . .+++|+|+|++|++|++++++|+.+|++|+++++++++.+.++ ++|++++++.++. . ....+....+++
T Consensus       138 ~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~-~~~~~~~~~~~~  214 (325)
T cd05280         138 LEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVLDREDL-L-DESKKPLLKARW  214 (325)
T ss_pred             HhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEcchhH-H-HHHHHHhcCCCc
Confidence            5433  5 3579999999999999999999999999999999999999997 8999888876542 1 122223333479


Q ss_pred             cEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcc-cchHHHHHHHHHHHH
Q 042426          152 DIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFY-HQYPKFLELVMLAIK  230 (270)
Q Consensus       152 d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  230 (270)
                      |+++||+|+..+..++++++++|+++.+|.....    +. ..+...++.+++++.+....... ....+.++.+.+++.
T Consensus       215 d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (325)
T cd05280         215 AGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGP----EL-TTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWK  289 (325)
T ss_pred             cEEEECCchHHHHHHHHhhcCCCEEEEEecCCCC----cc-ccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999875421    11 23344455688888887765432 223356666777777


Q ss_pred             CCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          231 EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       231 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      .+ +.+.+..++++++++++++.+.+++..||+|+++
T Consensus       290 ~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         290 PD-LLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             cC-CccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            77 4445678899999999999999999999999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.97  E-value=4.3e-30  Score=214.53  Aligned_cols=249  Identities=22%  Similarity=0.294  Sum_probs=191.8

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhh
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHE   74 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~   74 (270)
                      +++|.|.++  +++.|++||+|++.         |+|++|+.+++++ ++++ |++  +++ +++.+++++.|||.++..
T Consensus        64 e~~G~V~~~--~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~--~~~~~a~~~~~~~~ta~~~l~~  137 (326)
T cd08289          64 DLAGTVVES--NDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEW-VVPL-PKG--LTLKEAMILGTAGFTAALSIHR  137 (326)
T ss_pred             ceeEEEEEc--CCCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHH-eEEC-CCC--CCHHHHhhhhhHHHHHHHHHHH
Confidence            455666664  46789999999874         8999999999999 9999 998  555 488889999999988854


Q ss_pred             hcC---CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426           75 LCS---PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        75 ~~~---~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      ..+   ..++++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++.++.  ..+.+.+...+++
T Consensus       138 ~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~--~~~~~~~~~~~~~  214 (326)
T cd08289         138 LEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREEL--QEESIKPLEKQRW  214 (326)
T ss_pred             HHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchhH--HHHHHHhhccCCc
Confidence            332   345789999999999999999999999999999999999999997 8999888877653  2445555543489


Q ss_pred             cEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHH
Q 042426          152 DIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIK  230 (270)
Q Consensus       152 d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  230 (270)
                      |+++||+|+..+..++++++++|+++.+|....     .....+...++.+++++.+...... .....+.+..+.+.+.
T Consensus       215 d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (326)
T cd08289         215 AGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGG-----GEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLK  289 (326)
T ss_pred             CEEEECCcHHHHHHHHHHhhcCCEEEEEeecCC-----CCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcC
Confidence            999999999889999999999999999987532     1112234556678888888754322 1112334444444443


Q ss_pred             CCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          231 EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       231 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      .+.+.+.+..+++++++++|++.+.+++..||+|+++
T Consensus       290 ~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         290 PTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             ccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            3333344578899999999999999999999999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.97  E-value=1.3e-29  Score=212.60  Aligned_cols=243  Identities=22%  Similarity=0.309  Sum_probs=205.1

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|..+|+++++|++||+|++                              .|+|++|+.++.+. ++++ |++  +
T Consensus        63 ~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~--~  138 (338)
T cd08254          63 EIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARA-LVPV-PDG--V  138 (338)
T ss_pred             cccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHH-eEEC-CCC--C
Confidence            577888889999999999999986                              27899999999999 9999 998  5


Q ss_pred             cc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      +. ++++++.+++|||+++....+++++++|||.| +|++|++++++|+.+|++|+++++++++.+.++ ++|.+++++.
T Consensus       139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~  216 (338)
T cd08254         139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNS  216 (338)
T ss_pred             CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcC
Confidence            55 48889999999999998888899999999976 599999999999999999999999999999997 8999888877


Q ss_pred             CCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426          134 KEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      .+. .....+ ....+ ++|+++||+|. ..+..++++|+++|+++.+|....      ....+...+..++.++.+...
T Consensus       217 ~~~-~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~  288 (338)
T cd08254         217 LDD-SPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------KLTVDLSDLIARELRIIGSFG  288 (338)
T ss_pred             CCc-CHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------CCccCHHHHhhCccEEEEecc
Confidence            765 666666 44444 89999999985 588899999999999999986432      122445566777777777554


Q ss_pred             cCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          212 GDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ..     .+.+..+.++++++.+.+. ...+++++++++++.+.+++..+|+|+++
T Consensus       289 ~~-----~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         289 GT-----PEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             CC-----HHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            32     5678889999999999876 56889999999999999999999999874

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.97  E-value=8.9e-30  Score=214.08  Aligned_cols=249  Identities=21%  Similarity=0.265  Sum_probs=202.9

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      .+++|.|..+|++++.|++||+|+++                              |+|++|++++++. ++++ |++  
T Consensus        58 ~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-P~~--  133 (343)
T cd08236          58 HEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARN-LIKI-PDH--  133 (343)
T ss_pred             cceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHH-eEEC-cCC--
Confidence            35778888899999999999999873                              7999999999999 9999 998  


Q ss_pred             cccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCcee
Q 042426           54 LPYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAF  131 (270)
Q Consensus        54 ~~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi  131 (270)
                      ++.+ +|++ ..+++||+++. ..+++++++|+|+| +|++|++++|+|+.+|++ |+++++++++.+.++ ++|++.++
T Consensus       134 ~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~  209 (343)
T cd08236         134 VDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTI  209 (343)
T ss_pred             CCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEe
Confidence            5553 5555 67889999985 78899999999997 599999999999999997 999999999999887 89998888


Q ss_pred             ecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426          132 NYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF  209 (270)
Q Consensus       132 ~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (270)
                      ++++. . .+.+.+..++ ++|+++||.|. ..+..++++|+++|+++.+|.....   ..........++.+++++.++
T Consensus       210 ~~~~~-~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~  284 (343)
T cd08236         210 NPKEE-D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGS  284 (343)
T ss_pred             cCccc-c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEE
Confidence            88876 6 7777777766 79999999976 5788999999999999999864321   111122344556778888887


Q ss_pred             cccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhc-CCccceEEE
Q 042426          210 LAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFT-GQNVGKQLV  265 (270)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vv  265 (270)
                      ..........+.++++.++++++.+.  +.+...+++++++++++.+++ +...+|+|+
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         285 WNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             eeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            76443223456788899999999985  445678899999999999998 667788874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=1.6e-29  Score=209.79  Aligned_cols=246  Identities=18%  Similarity=0.167  Sum_probs=201.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec--ccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL--TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGE   82 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~   82 (270)
                      +++|+|.++|++++++++||+|+++  |+|++|+.++++. ++++ |++  +. .++.+..+++++++++. .+++++++
T Consensus        58 e~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~-~~~l-P~~--~~-~~~~~~~~~~~a~~~~~-~~~~~~~~  131 (312)
T cd08269          58 EGWGRVVALGPGVRGLAVGDRVAGLSGGAFAEYDLADADH-AVPL-PSL--LD-GQAFPGEPLGCALNVFR-RGWIRAGK  131 (312)
T ss_pred             eeEEEEEEECCCCcCCCCCCEEEEecCCcceeeEEEchhh-eEEC-CCc--hh-hhHHhhhhHHHHHHHHH-hcCCCCCC
Confidence            5678888899999999999999986  8999999999999 9999 988  42 23322378889999985 78899999


Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~  160 (270)
                      +++|+| +|++|++++|+|+.+|++ |+++++++++.+.++ ++|++++++.+.. ++.+.+.+.+++ ++|+++||.|+
T Consensus       132 ~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~  208 (312)
T cd08269         132 TVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR-ELGATEVVTDDSE-AIVERVRELTGGAGADVVIEAVGH  208 (312)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEecCCCc-CHHHHHHHHcCCCCCCEEEECCCC
Confidence            999997 599999999999999998 999998988888877 8999888887666 788888887776 89999999986


Q ss_pred             -chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--e
Q 042426          161 -KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--V  237 (270)
Q Consensus       161 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~  237 (270)
                       .....++++++++|+++.+|....     ....++...+..++..+.++.... +....+.++++.++++++.+.+  .
T Consensus       209 ~~~~~~~~~~l~~~g~~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~  282 (312)
T cd08269         209 QWPLDLAGELVAERGRLVIFGYHQD-----GPRPVPFQTWNWKGIDLINAVERD-PRIGLEGMREAVKLIADGRLDLGSL  282 (312)
T ss_pred             HHHHHHHHHHhccCCEEEEEccCCC-----CCcccCHHHHhhcCCEEEEecccC-ccchhhHHHHHHHHHHcCCCCchhh
Confidence             478899999999999999986541     122334445666777776654332 2234578899999999999987  3


Q ss_pred             eeeecCcccHHHHHHHHhcCCc-cceEEE
Q 042426          238 EDIAEGLEKAPSALVGIFTGQN-VGKQLV  265 (270)
Q Consensus       238 ~~~~~~~~~~~~a~~~~~~~~~-~gk~vv  265 (270)
                      +.+.+++++++++++.+.+++. .+|+++
T Consensus       283 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         283 LTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             eeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            5578999999999999999864 578876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>PRK10083 putative oxidoreductase; Provisional

Probab=99.97  E-value=9.6e-30  Score=213.55  Aligned_cols=243  Identities=16%  Similarity=0.174  Sum_probs=194.8

Q ss_pred             ccceEEEEeecCCCCCCCCCEEE---------------------------ec---ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVW---------------------------GL---TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~---------------------------~~---g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|..+|++|+.|++||+|+                           ++   |+|++|+.++.++ ++++ |++  +
T Consensus        60 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~--~  135 (339)
T PRK10083         60 EFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKN-AHRI-PDA--I  135 (339)
T ss_pred             ceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHH-eEEC-cCC--C
Confidence            46788888999999999999998                           33   7899999999999 9999 998  5


Q ss_pred             cccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHH-cCCE-EEEEeCCHHHHHHHHHHhCCCceee
Q 042426           55 PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKL-VGCY-VVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        55 ~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~-~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      +.+.+++..++.++|.++ ..+++++|++|+|+| +|++|++++|+|+. +|++ ++++++++++.+.++ ++|++++++
T Consensus       136 ~~~~a~~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~  212 (339)
T PRK10083        136 ADQYAVMVEPFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVIN  212 (339)
T ss_pred             CHHHHhhhchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEec
Confidence            554345677888888654 678899999999999 59999999999996 6995 777778888999888 899998998


Q ss_pred             cCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426          133 YKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL  210 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (270)
                      +++. ++.+.+..  .+ ++|++||++|+ ..+..++++++++|+++.+|....      ....+...+..+++++.+..
T Consensus       213 ~~~~-~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~  283 (339)
T PRK10083        213 NAQE-PLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE------PSEIVQQGITGKELSIFSSR  283 (339)
T ss_pred             Cccc-cHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CceecHHHHhhcceEEEEEe
Confidence            8775 67666643  23 57899999995 578999999999999999987532      11223444445666666544


Q ss_pred             ccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCC-ccceEEEEecC
Q 042426          211 AGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQ-NVGKQLVAVAR  269 (270)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~~~  269 (270)
                      .      ..+.++++.+++.+|.+.+  .+..+|+++++++|++.+.++. ..+|+++++.+
T Consensus       284 ~------~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        284 L------NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             c------ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence            3      1466889999999999987  3678899999999999998654 56899998764

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.97  E-value=9.6e-30  Score=213.84  Aligned_cols=241  Identities=18%  Similarity=0.184  Sum_probs=197.2

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSV   52 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~   52 (270)
                      .+++|+|.++|+++++|++||+|++                               .|+|++|++++++. ++++ |++ 
T Consensus        60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~-  136 (343)
T cd05285          60 HESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADF-CHKL-PDN-  136 (343)
T ss_pred             cceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHH-cEEC-cCC-
Confidence            3678889999999999999999985                               37899999999999 9999 999 


Q ss_pred             Ccccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCce
Q 042426           53 PLPYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDA  130 (270)
Q Consensus        53 ~~~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v  130 (270)
                       ++.+ ++.+ .++.+||+++ ..+++++|++++|+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|++++
T Consensus       137 -~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~v  211 (343)
T cd05285         137 -VSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHT  211 (343)
T ss_pred             -CCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEE
Confidence             5553 5544 6788999987 7899999999999875 99999999999999997 899988899999997 8899989


Q ss_pred             eecCCchhH---HHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcce
Q 042426          131 FNYKEEPDL---DAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRIC  205 (270)
Q Consensus       131 i~~~~~~~~---~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  205 (270)
                      +++++. ++   .+.+.+.+++ ++|++|||.|+. .+..++++++++|+++.+|....     . ...+......+++.
T Consensus       212 i~~~~~-~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~  284 (343)
T cd05285         212 VNVRTE-DTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKP-----E-VTLPLSAASLREID  284 (343)
T ss_pred             eccccc-cchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-----C-CccCHHHHhhCCcE
Confidence            888765 53   6777777766 899999999985 88999999999999999986432     1 12333455566666


Q ss_pred             eeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCC-ccceEEE
Q 042426          206 MEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQ-NVGKQLV  265 (270)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv  265 (270)
                      +.+....      .+.++++.+++.++.+.  +.+.+++++++++++++.+.+++ ..+|++|
T Consensus       285 ~~~~~~~------~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         285 IRGVFRY------ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             EEEeccC------hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            6665432      25678899999999865  34567899999999999999875 5689988

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.97  E-value=6.2e-30  Score=214.59  Aligned_cols=244  Identities=20%  Similarity=0.203  Sum_probs=199.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-----------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHh
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-----------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGL   72 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-----------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l   72 (270)
                      +++|.|..+|++++.|++||+|+++           |+|++|++++.+. ++++ |++  ++. +++.+++++.|||+++
T Consensus        61 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~~~~~~~~~~~ta~~~l  136 (339)
T cd08249          61 DFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADL-TAKI-PDN--ISFEEAATLPVGLVTAALAL  136 (339)
T ss_pred             eeeEEEEEeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhh-eEEC-CCC--CCHHHceecchHHHHHHHHH
Confidence            5678888899999999999999986           7999999999999 9999 988  555 4888899999999998


Q ss_pred             hhhcCC----------CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHH
Q 042426           73 HELCSP----------KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAA  142 (270)
Q Consensus        73 ~~~~~~----------~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~  142 (270)
                      .+..++          .++++++|+|++|++|++++++++.+|++|++++ ++++.+.++ ++|+++++++++. ++.+.
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~~~~-~~~~~  213 (339)
T cd08249         137 FQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDYHDP-DVVED  213 (339)
T ss_pred             hccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEEEECCCc-hHHHH
Confidence            766655          7899999999999999999999999999999988 568888887 8999989988876 78888


Q ss_pred             HHhHcCCCccEEEeCCCc-chHHHHHHcccc--CCEEEEEcccccccccCCCCccchHHHHhhcceeeecccc-------
Q 042426          143 LNRCFPEGIDIYFENVGG-KMLDAVLLNMRI--CGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAG-------  212 (270)
Q Consensus       143 i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  212 (270)
                      +.+.+++++|+++|++|+ ..+..+++++++  +|+++.+|......            .+..+.++......       
T Consensus       214 l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~  281 (339)
T cd08249         214 IRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------------EPRKGVKVKFVLGYTVFGEIP  281 (339)
T ss_pred             HHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------------cCCCCceEEEEEeeeeccccc
Confidence            877766689999999998 789999999999  99999998754211            01112222221111       


Q ss_pred             CcccchHHHHHHHHHHHHCCceeeeeeeecC--cccHHHHHHHHhcCC-ccceEEEEe
Q 042426          213 DFYHQYPKFLELVMLAIKEGKLVYVEDIAEG--LEKAPSALVGIFTGQ-NVGKQLVAV  267 (270)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~a~~~~~~~~-~~gk~vv~~  267 (270)
                      ..+......++++.+++.++.+.+.....++  ++++++|++.+.+++ ..+|+|+++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         282 EDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             ccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            1122334678889999999999987666777  999999999999998 899999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.97  E-value=2.4e-29  Score=211.63  Aligned_cols=244  Identities=20%  Similarity=0.157  Sum_probs=202.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-------------------------------ccceeeEeecCC--ccceeccCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEFSLIQSP--QLLIKILDTS   51 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~--~~~~~~~p~~   51 (270)
                      +++|+|.++|++++++++||+|++.                               |++++|+.++++  . ++++ |++
T Consensus        61 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-p~~  138 (345)
T cd08286          61 EGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNS-LYKL-PEG  138 (345)
T ss_pred             cceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCc-eEEC-CCC
Confidence            5778888899999999999999863                               788999999987  7 9999 988


Q ss_pred             CCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCc
Q 042426           52 VPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDD  129 (270)
Q Consensus        52 ~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~~  129 (270)
                        ++. +++.++..+++||.++....++++|++++|+|+ |++|++++|+++.+| .+|+++.+++++.+.++ ++|++.
T Consensus       139 --~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~  214 (345)
T cd08286         139 --VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATH  214 (345)
T ss_pred             --CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCc
Confidence              554 488899999999998777788999999999875 999999999999999 69999888888888888 899998


Q ss_pred             eeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceee
Q 042426          130 AFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICME  207 (270)
Q Consensus       130 vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (270)
                      ++++++. ++.+.+.+..++ ++|++|||+|. ..+..+++.++++|+++.+|....      ....+...++.+++++.
T Consensus       215 ~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~  287 (345)
T cd08286         215 TVNSAKG-DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLWIKNITIT  287 (345)
T ss_pred             eeccccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHhhcCcEEE
Confidence            9988876 777778777766 89999999986 477888899999999999986431      12345566677888887


Q ss_pred             eccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCC--ccceEEEEe
Q 042426          208 GFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQ--NVGKQLVAV  267 (270)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~--~~gk~vv~~  267 (270)
                      +....      .+.++++.++++++.+.+.  +..++++++++++++.+....  ...|++|++
T Consensus       288 ~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         288 TGLVD------TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             eecCc------hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            65332      2467888899999998753  568899999999999998754  345999864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.97  E-value=2.1e-29  Score=211.96  Aligned_cols=243  Identities=19%  Similarity=0.191  Sum_probs=200.7

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec----------------------------------ccceeeEeecCC--ccceec
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL----------------------------------TSWEEFSLIQSP--QLLIKI   47 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~----------------------------------g~~~~~~~v~~~--~~~~~~   47 (270)
                      .+++|+|.++|++++++++||+|++.                                  |+|++|++++++  . ++++
T Consensus        59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~~  137 (344)
T cd08284          59 HEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGT-LLKL  137 (344)
T ss_pred             cceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCc-eEEC
Confidence            35789999999999999999999872                                  789999999965  7 9999


Q ss_pred             cCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh
Q 042426           48 LDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKF  125 (270)
Q Consensus        48 ~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~  125 (270)
                       |++  +++ ++++++.+++|||+++. ..++.+|++|+|+| +|++|++++++|+.+|+ +|+++++++++.+.++ ++
T Consensus       138 -p~~--l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~  211 (344)
T cd08284         138 -PDG--LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-AL  211 (344)
T ss_pred             -CCC--CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hh
Confidence             998  555 48889999999999995 48899999999997 59999999999999997 8999988888888887 89


Q ss_pred             CCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhc
Q 042426          126 GFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKR  203 (270)
Q Consensus       126 g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  203 (270)
                      |+. .++.+.. ++...+.+.+++ ++|++|||+++ ..+..++++++++|+++.+|....     ..........+.++
T Consensus       212 g~~-~~~~~~~-~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~  284 (344)
T cd08284         212 GAE-PINFEDA-EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTA-----EEFPFPGLDAYNKN  284 (344)
T ss_pred             CCe-EEecCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCC-----CCccccHHHHhhcC
Confidence            975 4666665 777888887776 89999999996 588899999999999999987542     11223345567778


Q ss_pred             ceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          204 ICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      +++.+...     ...+.++++.+++.++.+.+  .+..++++++++++++.+.+++. +|+|++
T Consensus       285 ~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         285 LTLRFGRC-----PVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             cEEEEecC-----CcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence            87764421     23577889999999999876  35678899999999999998877 999974

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.97  E-value=2.1e-29  Score=210.10  Aligned_cols=247  Identities=22%  Similarity=0.305  Sum_probs=195.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhh
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHE   74 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~   74 (270)
                      +++|+|..  +++..|++||+|+++         |++++|+.++++. ++++ |++  ++. +++.++..+.+||.++..
T Consensus        63 e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-P~~--~~~~~aa~~~~~~~ta~~~~~~  136 (323)
T TIGR02823        63 DAAGTVVS--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADW-LVPL-PEG--LSLREAMALGTAGFTAALSVMA  136 (323)
T ss_pred             eeEEEEEe--cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhh-eEEC-CCC--CCHHHhhhhhhhHHHHHHHHHH
Confidence            34555554  567789999999874         7999999999999 9999 998  555 488889999999988754


Q ss_pred             h--cCCCCCc-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426           75 L--CSPKKGE-YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        75 ~--~~~~~g~-~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      .  +.+.+++ +++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|++++++.++. +.  .+.....+++
T Consensus       137 ~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~--~~~~~~~~~~  212 (323)
T TIGR02823       137 LERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVIDREDL-SP--PGKPLEKERW  212 (323)
T ss_pred             hhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEEccccH-HH--HHHHhcCCCc
Confidence            4  3478898 9999999999999999999999999999998888889997 8999888876553 32  4444444469


Q ss_pred             cEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcc-cchHHHHHHHHHHHH
Q 042426          152 DIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFY-HQYPKFLELVMLAIK  230 (270)
Q Consensus       152 d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  230 (270)
                      |+++||+|+..+..++++++++|+++.+|....     .....+...++.+++++.+......+ ....+.+..+.+++.
T Consensus       213 d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (323)
T TIGR02823       213 AGAVDTVGGHTLANVLAQLKYGGAVAACGLAGG-----PDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLK  287 (323)
T ss_pred             eEEEECccHHHHHHHHHHhCCCCEEEEEcccCC-----CCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhh
Confidence            999999999888999999999999999987532     11223334555788888887654321 222345677777888


Q ss_pred             CCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          231 EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       231 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      .+.+.+. ...++++++++|++.+.+++..+|+|+++
T Consensus       288 ~~~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       288 PRNLESI-TREITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             cCCCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            8888765 45899999999999999999999999864

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=99.97  E-value=2.4e-29  Score=212.91  Aligned_cols=247  Identities=19%  Similarity=0.271  Sum_probs=199.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE   33 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~   33 (270)
                      +++|+|.++|++++++++||+|++.                                                   |+|+
T Consensus        60 e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a  139 (365)
T cd05279          60 EGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFA  139 (365)
T ss_pred             ceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCcccccccccccc
Confidence            5678888899999999999999753                                                   5899


Q ss_pred             eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEE
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGS  111 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~  111 (270)
                      +|+.++++. ++++ |++  +++ +++.+++++++||+++.+.+++++|+++||+| +|++|++++++|+.+|++ |+++
T Consensus       140 ~~~~v~~~~-~~~l-P~~--~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~  214 (365)
T cd05279         140 EYTVVSEIS-LAKI-DPD--APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAV  214 (365)
T ss_pred             ceEEecCCc-eEEC-CCC--CCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEE
Confidence            999999999 9999 999  555 48888889999999988888999999999997 599999999999999995 7777


Q ss_pred             eCCHHHHHHHHHHhCCCceeecCCch-hHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccc-cCCEEEEEccccccccc
Q 042426          112 ARSKEKVDLLKHKFGFDDAFNYKEEP-DLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMR-ICGHIAVCGMISQYNIE  188 (270)
Q Consensus       112 ~~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~  188 (270)
                      ++++++.+.++ ++|++++++.++.+ ++.+.+.+.+++++|+++|++|. ..+..++++++ ++|+++.+|....    
T Consensus       215 ~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~----  289 (365)
T cd05279         215 DINKDKFEKAK-QLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS----  289 (365)
T ss_pred             eCCHHHHHHHH-HhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCC----
Confidence            77999999997 99998888776531 45666777665589999999986 68889999999 9999999876431    


Q ss_pred             CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          189 KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      .....++...+ .++.++.|.+...+  ...+.+.++.+++.++.+.+  ...++++++++++|++.+.+++.. |+++
T Consensus       290 ~~~~~~~~~~~-~~~~~l~g~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         290 GTEATLDPNDL-LTGRTIKGTVFGGW--KSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             CCceeeCHHHH-hcCCeEEEEeccCC--chHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence            11223444454 56677777655433  23567888999999999875  466789999999999999876654 6654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.97  E-value=3.1e-29  Score=208.81  Aligned_cols=251  Identities=27%  Similarity=0.381  Sum_probs=211.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec--------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhh
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL--------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHEL   75 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~   75 (270)
                      +++|+|.++|+++++|++||+|+++        |++++|+.++++. ++++ |++  ++. +++++++++.+||+++...
T Consensus        64 e~~G~v~~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~--~~~~~aa~~~~~~~~a~~~l~~~  139 (325)
T cd08253          64 DGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQ-LVPL-PDG--VSFEQGAALGIPALTAYRALFHR  139 (325)
T ss_pred             ceEEEEEeeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHH-cEeC-CCC--CCHHHHhhhhhHHHHHHHHHHHH
Confidence            5678888999999999999999874        7899999999999 9999 988  555 4889999999999999887


Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEE
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIY  154 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v  154 (270)
                      +++.+|++++|+|+++++|++++++++..|++|+++++++++.+.++ ++|++++++.... ++.+.+.+..++ ++|++
T Consensus       140 ~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~v  217 (325)
T cd08253         140 AGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYRAE-DLADRILAATAGQGVDVI  217 (325)
T ss_pred             hCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHHHHHcCCCceEEE
Confidence            89999999999999999999999999999999999999999999997 8999888888776 777778777665 89999


Q ss_pred             EeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHHCCc
Q 042426          155 FENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       155 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~  233 (270)
                      +||+++......+++++++|+++.++....      ........++.++.++.+...... +....+.++++.+++.++.
T Consensus       218 i~~~~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (325)
T cd08253         218 IEVLANVNLAKDLDVLAPGGRIVVYGSGGL------RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGA  291 (325)
T ss_pred             EECCchHHHHHHHHhhCCCCEEEEEeecCC------cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCC
Confidence            999998888889999999999999887431      112333445667777776654332 2334567788888999999


Q ss_pred             eeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          234 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       234 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +++.....+++++++++++.+.+++..||+++++
T Consensus       292 i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         292 LRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             ccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            8887778899999999999999988899999863

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.97  E-value=2.6e-29  Score=210.49  Aligned_cols=242  Identities=24%  Similarity=0.304  Sum_probs=200.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|.++|++++.+++||+|++.                              |+|++|+.++.+. ++++ |++  +
T Consensus        61 e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~--~  136 (334)
T PRK13771         61 EVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTS-LVKV-PPN--V  136 (334)
T ss_pred             cceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhc-eEEC-CCC--C
Confidence            5778888999999999999999873                              7899999999999 9999 988  4


Q ss_pred             cc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      +. +++.+++.+.+||+++... +++++++++|+|++|++|++++++++.+|++++++++++++.+.++ ++ ++++++.
T Consensus       137 ~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~  213 (334)
T PRK13771        137 SDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVG  213 (334)
T ss_pred             CHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCc
Confidence            44 4888899999999999765 8999999999999999999999999999999999999999999987 77 6666655


Q ss_pred             CCchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC
Q 042426          134 KEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD  213 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (270)
                      +   ++.+.+.+.  +++|+++||+|+.....++++++++|+++.+|.....    ..........+.+++++.+...  
T Consensus       214 ~---~~~~~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~--  282 (334)
T PRK13771        214 S---KFSEEVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPS----PTYSLRLGYIILKDIEIIGHIS--  282 (334)
T ss_pred             h---hHHHHHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCC----CCcccCHHHHHhcccEEEEecC--
Confidence            4   345555554  3699999999998889999999999999999874421    1101223344567788777632  


Q ss_pred             cccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          214 FYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                         ...+.++++.++++++.+++.+...++++++++|++.+.+++..+|++++.
T Consensus       283 ---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        283 ---ATKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             ---CCHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence               225778899999999999887778899999999999999988889999864

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=3.8e-29  Score=209.57  Aligned_cols=246  Identities=25%  Similarity=0.339  Sum_probs=211.7

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------ccceeeEeecCCccceeccCCCCCccc-ccc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTG   59 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a   59 (270)
                      +++|.|.++|+++++|++||+|++.                        |+|++|+.++++. ++++ |++  ++. +++
T Consensus        64 e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~--~~~~~a~  139 (336)
T cd08276          64 DGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEG-LVRA-PDH--LSFEEAA  139 (336)
T ss_pred             ceeEEEEEeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHH-eEEC-CCC--CCHHHhh
Confidence            5678888899999999999999874                        5799999999999 9999 988  555 578


Q ss_pred             ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCC-chh
Q 042426           60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKE-EPD  138 (270)
Q Consensus        60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~-~~~  138 (270)
                      .++.++++||+++...+++++|++++|+| +|++|++++++++..|++|+++++++++.+.++ ++|.+++++.+. . +
T Consensus       140 ~~~~~~~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~  216 (336)
T cd08276         140 TLPCAGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRTTP-D  216 (336)
T ss_pred             hhhHHHHHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCccc-C
Confidence            88999999999998888999999999995 699999999999999999999999999999998 689888888776 5 7


Q ss_pred             HHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccc
Q 042426          139 LDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQ  217 (270)
Q Consensus       139 ~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (270)
                      +.+.+.+.+++ ++|+++|+++...+..++++++++|+++.+|.....     ....+....+.+++++.+.....    
T Consensus       217 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----  287 (336)
T cd08276         217 WGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLTKGATLRGIAVGS----  287 (336)
T ss_pred             HHHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhhcceEEEEEecCc----
Confidence            88888888776 899999999988889999999999999999875431     11244566678899998887654    


Q ss_pred             hHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          218 YPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       218 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                       .+.++++.+++.++.+.+.....+++++++++++.+.+++..+|+++++
T Consensus       288 -~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         288 -RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             -HHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence             4678889999999988877668899999999999999888889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>smart00829 PKS_ER Enoylreductase

Probab=99.97  E-value=2.2e-29  Score=206.19  Aligned_cols=251  Identities=22%  Similarity=0.300  Sum_probs=205.9

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec--ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL--TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      .+++|.|.++|++++.|++||+|+++  |+|++|+.++.+. ++++ |++  ++. +++++++++.++|.++.+...+.+
T Consensus        29 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~  104 (288)
T smart00829       29 GECAGVVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARL-VVPI-PDG--LSFEEAATVPVVFLTAYYALVDLARLRP  104 (288)
T ss_pred             ceeEEEEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHH-eEEC-CCC--CCHHHHHhchHHHHHHHHHHHHHhCCCC
Confidence            35678888899999999999999997  8999999999999 9999 988  554 478889999999999877888999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeecCCchhHHHHHHhHcCC-CccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--DDAFNYKEEPDLDAALNRCFPE-GIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~  157 (270)
                      |++++|+|++|++|++++++++.+|++|+++++++++.+.++ ++|+  +.++++.+. ++.+.+.+..++ ++|+++|+
T Consensus       105 g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~  182 (288)
T smart00829      105 GESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGIPDDHIFSSRDL-SFADEILRATGGRGVDVVLNS  182 (288)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCChhheeeCCCc-cHHHHHHHHhCCCCcEEEEeC
Confidence            999999999999999999999999999999999999999997 8998  678888776 788888877766 89999999


Q ss_pred             CCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc---ccchHHHHHHHHHHHHCCce
Q 042426          158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF---YHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~  234 (270)
                      +++.....++++++++|+++.+|.....    .....+... +.+++++.+..+...   +....+.+.++.+++.++.+
T Consensus       183 ~~~~~~~~~~~~l~~~g~~v~~g~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (288)
T smart00829      183 LAGEFLDASLRCLAPGGRFVEIGKRDIR----DNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVL  257 (288)
T ss_pred             CCHHHHHHHHHhccCCcEEEEEcCcCCc----cccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCc
Confidence            9988888999999999999999874321    111122222 455666666544321   11234567788899999998


Q ss_pred             eeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      .+.....+++++++++++.+..++..+|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      258 RPLPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             cCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            8766677899999999999999887788764

Enoylreductase in Polyketide synthases.

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.97  E-value=2.8e-29  Score=210.51  Aligned_cols=238  Identities=20%  Similarity=0.199  Sum_probs=199.5

Q ss_pred             ccceEEEEeecCCCCCCCCCEEE-e-------------------------------------cccceeeEeecCCcccee
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVW-G-------------------------------------LTSWEEFSLIQSPQLLIK   46 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~-~-------------------------------------~g~~~~~~~v~~~~~~~~   46 (270)
                      +++|.|.++|+++++|++||+|+ +                                     .|+|++|++++++. +++
T Consensus        60 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~  138 (337)
T cd05283          60 EIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERF-VFK  138 (337)
T ss_pred             ceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhh-eEE
Confidence            56788888999999999999996 2                                     27899999999999 999


Q ss_pred             ccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 042426           47 ILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF  125 (270)
Q Consensus        47 ~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~  125 (270)
                      + |++  ++. +++.+++.+.+||.++... .+++|++++|.| .|++|++++++++.+|++|+++++++++.+.++ ++
T Consensus       139 l-p~~--~~~~~aa~l~~~~~ta~~~~~~~-~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~  212 (337)
T cd05283         139 I-PEG--LDSAAAAPLLCAGITVYSPLKRN-GVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KL  212 (337)
T ss_pred             C-CCC--CCHHHhhhhhhHHHHHHHHHHhc-CCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-Hc
Confidence            9 998  554 4788999999999998654 589999999977 599999999999999999999999999999997 89


Q ss_pred             CCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcc
Q 042426          126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRI  204 (270)
Q Consensus       126 g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  204 (270)
                      |++++++.++. ++...    ..+++|++|||+|.. .+..++++++++|+++.+|.....      ...+...++.+++
T Consensus       213 g~~~vi~~~~~-~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~  281 (337)
T cd05283         213 GADEFIATKDP-EAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFGRK  281 (337)
T ss_pred             CCcEEecCcch-hhhhh----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcCce
Confidence            99888877654 33322    234799999999987 589999999999999999875421      1345566677899


Q ss_pred             eeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          205 CMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      ++.+.....     .+.++.+.+++.++++.+.+ ..++++++++|++.+.+++..||+|++
T Consensus       282 ~i~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         282 SVAGSLIGG-----RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             EEEEecccC-----HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            998877654     46788899999999998765 678999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.97  E-value=3.2e-29  Score=208.47  Aligned_cols=250  Identities=24%  Similarity=0.342  Sum_probs=210.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      +++|.|.++|++++.+++||+|+++   |+|++|+.++++. ++++ |++  ++. ++++++.++.++|+++.+.+.+.+
T Consensus        64 e~~G~v~~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~~~~l~~~~~~a~~~~~~~~~~~~  139 (323)
T cd05276          64 EVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQ-LLPV-PEG--LSLVEAAALPEVFFTAWQNLFQLGGLKA  139 (323)
T ss_pred             eeEEEEEeeCCCCCCCCCCCEEEEecCCCceeEEEEcCHHH-hccC-CCC--CCHHHHhhchhHHHHHHHHHHHhcCCCC
Confidence            5678888899999999999999987   8999999999999 9999 988  555 488899999999999888888999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g  159 (270)
                      +++++|+|+++++|++++++++..|++|+++++++++.+.++ ++|.+.+++.... ++.+.+.+...+ ++|+++|+.|
T Consensus       140 ~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g  217 (323)
T cd05276         140 GETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMVG  217 (323)
T ss_pred             CCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCch-hHHHHHHHHhCCCCeEEEEECCc
Confidence            999999999999999999999999999999999999999887 8898888887776 777777777665 8999999999


Q ss_pred             cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----ccchHHHHHHHHHHHHCCce
Q 042426          160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~  234 (270)
                      +..+..++++++++|+++.+|......     ...+...++.+++++.+......     +....+.+.++.+++.++.+
T Consensus       218 ~~~~~~~~~~~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (323)
T cd05276         218 GDYLARNLRALAPDGRLVLIGLLGGAK-----AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRI  292 (323)
T ss_pred             hHHHHHHHHhhccCCEEEEEecCCCCC-----CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCc
Confidence            888889999999999999998754321     12344455568888888776543     12233566778889999999


Q ss_pred             eeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      .+.....|++++++++++.+.+++..+|+++
T Consensus       293 ~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         293 RPVIDKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             cCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            8777788999999999999998888888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=3.6e-29  Score=213.18  Aligned_cols=246  Identities=21%  Similarity=0.207  Sum_probs=197.0

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCCCCC-
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDTSVP-   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~-   53 (270)
                      +++|+|.++|++++.|++||+|++                              .|+|++|+.++++. ++++ |++++ 
T Consensus        94 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~-~~~l-P~~~~~  171 (384)
T cd08265          94 EFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARY-AWEI-NELREI  171 (384)
T ss_pred             ceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHH-eEEC-Cccccc
Confidence            577899999999999999999985                              27899999999999 9999 87531 


Q ss_pred             ----ccccccccCchhhhHHHHhhhh-cCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC
Q 042426           54 ----LPYYTGILGMPGLTAYGGLHEL-CSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF  127 (270)
Q Consensus        54 ----~~~~~a~l~~~~~ta~~~l~~~-~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~  127 (270)
                          ++.++++++.++++||+++... +++++|++|+|+| +|++|++++++|+.+|+ +|+++++++++.+.++ ++|+
T Consensus       172 ~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~  249 (384)
T cd08265         172 YSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGA  249 (384)
T ss_pred             cccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCC
Confidence                3435778888999999998666 7899999999996 59999999999999999 7999998888888888 8999


Q ss_pred             CceeecCCc--hhHHHHHHhHcCC-CccEEEeCCCcc--hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhh
Q 042426          128 DDAFNYKEE--PDLDAALNRCFPE-GIDIYFENVGGK--MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGK  202 (270)
Q Consensus       128 ~~vi~~~~~--~~~~~~i~~~~~~-~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  202 (270)
                      ++++++++.  .++...+.+.+++ ++|+++||.|+.  .+..++++++++|+++.+|....      ....+......+
T Consensus       250 ~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~  323 (384)
T cd08265         250 DYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------TVPLHLEVLQVR  323 (384)
T ss_pred             CEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------CCcccHHHHhhC
Confidence            888877631  1567778888777 899999999963  77899999999999999986432      112233444455


Q ss_pred             cceeeeccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          203 RICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      ..++.+.....    ....+.++.+++.++.+.+.  +...|+++++++|++.+.++ ..+|+|+
T Consensus       324 ~~~l~~~~~~~----~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         324 RAQIVGAQGHS----GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             ceEEEEeeccC----CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            66666654322    13468889999999999863  55789999999999997665 5788875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=5.4e-29  Score=208.31  Aligned_cols=242  Identities=23%  Similarity=0.292  Sum_probs=199.0

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      .+++|.|.++|++++.|++||+|+++                              |+|++|++++.+. ++++ |++  
T Consensus        60 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~--  135 (332)
T cd08259          60 HEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERS-LVKL-PDN--  135 (332)
T ss_pred             ccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhh-eEEC-CCC--
Confidence            35778888999999999999999874                              6899999999999 9999 998  


Q ss_pred             ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      ++. +++.+++++.+||+++.. +++.++++++|+|++|++|++++++++..|++|+++++++++.+.++ +++.+++++
T Consensus       136 ~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~  213 (332)
T cd08259         136 VSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVID  213 (332)
T ss_pred             CCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEe
Confidence            554 488889999999999976 88999999999999999999999999999999999999988888887 888876665


Q ss_pred             cCCchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecccc
Q 042426          133 YKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAG  212 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (270)
                      ..   ++.+.+.+..  ++|+++||+|......++++++++|+++.++.....     ....+......++..+.+... 
T Consensus       214 ~~---~~~~~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~-  282 (332)
T cd08259         214 GS---KFSEDVKKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPD-----PAPLRPGLLILKEIRIIGSIS-  282 (332)
T ss_pred             cH---HHHHHHHhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCC-----CcCCCHHHHHhCCcEEEEecC-
Confidence            43   2445555443  599999999988889999999999999999875421     111222333345666665532 


Q ss_pred             CcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          213 DFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                          ...+.++++.+++.+|.+.+.+..++++++++++++.+.+++..||++++
T Consensus       283 ----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         283 ----ATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             ----CCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence                23567888999999999988877889999999999999998888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=3.7e-29  Score=210.85  Aligned_cols=242  Identities=19%  Similarity=0.179  Sum_probs=195.9

Q ss_pred             cccceEEEEeecCCC--CCCCCCEEEe---------------------------c-----ccceeeEeecCCccceeccC
Q 042426            4 LSGYGVSKVLDSTHP--NYKKDDLVWG---------------------------L-----TSWEEFSLIQSPQLLIKILD   49 (270)
Q Consensus         4 i~g~g~v~~vG~~v~--~~~~Gd~V~~---------------------------~-----g~~~~~~~v~~~~~~~~~~p   49 (270)
                      .+++|+|.++|++++  +|++||+|++                           +     |+|++|+.+++++.++++ |
T Consensus        68 ~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~l-P  146 (350)
T cd08256          68 HEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKV-P  146 (350)
T ss_pred             cceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEEC-C
Confidence            357888999999999  9999999986                           2     899999999988427899 9


Q ss_pred             CCCCcccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCC
Q 042426           50 TSVPLPYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGF  127 (270)
Q Consensus        50 ~~~~~~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~  127 (270)
                      ++  ++.+ ++.+ .+++|+|+++ +.+++++|++|+|.| +|++|++++++|+.+|++ ++++++++++.+.++ ++|+
T Consensus       147 ~~--~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~  220 (350)
T cd08256         147 DD--IPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KFGA  220 (350)
T ss_pred             CC--CCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-HcCC
Confidence            88  5554 5666 8899999998 778999999999954 599999999999999984 677777888888887 8999


Q ss_pred             CceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHH-Hhhcc
Q 042426          128 DDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQV-VGKRI  204 (270)
Q Consensus       128 ~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~  204 (270)
                      +++++++.. ++.+.+.+.+++ ++|++||++|+ ..+..++++++++|+++.+|....     . ...+...+ ..++.
T Consensus       221 ~~v~~~~~~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~  293 (350)
T cd08256         221 DVVLNPPEV-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD-----P-VTVDWSIIGDRKEL  293 (350)
T ss_pred             cEEecCCCc-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC-----C-CccChhHhhccccc
Confidence            888888766 788888887776 89999999995 578889999999999999986431     1 11222222 24566


Q ss_pred             eeeeccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          205 CMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      ++.++....      ..+.++.+++.+|.+.+.  +..+++++++++|++.+.+++..+|+++
T Consensus       294 ~i~~~~~~~------~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         294 DVLGSHLGP------YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             EEEEeccCc------hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            666665432      357889999999999873  5688999999999999999888889874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.97  E-value=4.7e-29  Score=209.73  Aligned_cols=244  Identities=19%  Similarity=0.200  Sum_probs=198.7

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCc----cceeccCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQ----LLIKILDT   50 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~----~~~~~~p~   50 (270)
                      +++|+|.++|++++.|++||+|+++                              |+|++|+.++++.    .++++ |+
T Consensus        60 ~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~l-P~  138 (343)
T cd08235          60 EIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKL-PD  138 (343)
T ss_pred             ceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEEC-CC
Confidence            5778899999999999999999973                              8899999998642    27899 99


Q ss_pred             CCCcccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCC
Q 042426           51 SVPLPYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFD  128 (270)
Q Consensus        51 ~~~~~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~  128 (270)
                      +  ++.+ ++. ..++.+||+++.. .++++|++|+|+| +|++|++++|+|+..|++ |+++++++++.+.++ ++|.+
T Consensus       139 ~--~~~~~aa~-~~~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~  212 (343)
T cd08235         139 N--VSFEEAAL-VEPLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGAD  212 (343)
T ss_pred             C--CCHHHHHh-hhHHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCc
Confidence            8  5654 444 4788999999954 5899999999997 599999999999999998 999998999999987 89998


Q ss_pred             ceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhccee
Q 042426          129 DAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICM  206 (270)
Q Consensus       129 ~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (270)
                      +++++++. ++.+.+.+..++ ++|+++||+++. .+..++++++++|+++.++.....    .....+......+++.+
T Consensus       213 ~~~~~~~~-~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~l  287 (343)
T cd08235         213 YTIDAAEE-DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKG----STVNIDPNLIHYREITI  287 (343)
T ss_pred             EEecCCcc-CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCC----CCcccCHHHHhhCceEE
Confidence            88888887 888888887776 899999999964 888999999999999998764321    11223344555566766


Q ss_pred             eeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          207 EGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      .+.....     .+.++++.+++.++.+.+  .+..++++++++++++.+.+++ .+|+|+.
T Consensus       288 ~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         288 TGSYAAS-----PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             EEEecCC-----hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence            6554322     466888999999999863  4557889999999999999998 9999873

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=7.7e-29  Score=208.00  Aligned_cols=247  Identities=25%  Similarity=0.348  Sum_probs=209.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|.|.++|++++.|++||+|++.                              |++++|+.++++. ++++ |++  +
T Consensus        64 e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~-~~~~-p~~--~  139 (342)
T cd08266          64 DGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARN-LLPI-PDN--L  139 (342)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHH-ceeC-CCC--C
Confidence            5678888899999999999999874                              6799999999999 9999 988  5


Q ss_pred             cc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      +. +++.++.++.+||+++.+..++.++++++|+|+++++|++++++++..|++|+++++++++.+.++ .++.+.+++.
T Consensus       140 ~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~  218 (342)
T cd08266         140 SFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDY  218 (342)
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEec
Confidence            54 478888899999999888889999999999999999999999999999999999999999988887 7887777777


Q ss_pred             CCchhHHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecccc
Q 042426          134 KEEPDLDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAG  212 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (270)
                      .+. ++.+.+.+.+.+ ++|+++|++|...+...+++++++|+++.++.....     ....+....+.+++++.+....
T Consensus       219 ~~~-~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  292 (342)
T cd08266         219 RKE-DFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMG  292 (342)
T ss_pred             CCh-HHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecC
Confidence            665 677777776665 899999999998889999999999999999875431     1223444556778888777654


Q ss_pred             CcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          213 DFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      .     ...+.++.+++.++.+.+.+...|++++++++++.+.+++..+|++++.
T Consensus       293 ~-----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         293 T-----KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             C-----HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            3     4578889999999999887778899999999999999888889999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.97  E-value=2.9e-29  Score=205.77  Aligned_cols=250  Identities=22%  Similarity=0.315  Sum_probs=206.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec--ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL--TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKG   81 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g   81 (270)
                      +++|+|.++|+++++|++||+|+++  |+|++|+.++.+. ++++ |++  ++. +++.+++++.++|.++.+...+++|
T Consensus        34 e~~G~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~g  109 (293)
T cd05195          34 ECSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARL-VVKI-PDS--LSFEEAATLPVAYLTAYYALVDLARLQKG  109 (293)
T ss_pred             eeeEEEEeecCCccCCCCCCEEEEEecCcccceEEechhh-eEeC-CCC--CCHHHHhhchHHHHHHHHHHHHHhccCCC
Confidence            5678888899999999999999998  8999999999999 9999 988  554 4788889999999999888899999


Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--CCceeecCCchhHHHHHHhHcCC-CccEEEeCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG--FDDAFNYKEEPDLDAALNRCFPE-GIDIYFENV  158 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g--~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~  158 (270)
                      ++++|+|++|++|++++++++.+|++++++++++++.+.++ +.+  ++.+++.... ++.+.+.+.+++ ++|+++||+
T Consensus       110 ~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~  187 (293)
T cd05195         110 ESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-ELGGPVDHIFSSRDL-SFADGILRATGGRGVDVVLNSL  187 (293)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhCCCcceEeecCch-hHHHHHHHHhCCCCceEEEeCC
Confidence            99999999999999999999999999999999989999988 777  6777887766 788888888766 899999999


Q ss_pred             CcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc----ccchHHHHHHHHHHHHCCce
Q 042426          159 GGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF----YHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       159 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~  234 (270)
                      |+..+..++++++++|+++.+|......    ..... ...+.+++++....+...    +....+.+.++.+++.++.+
T Consensus       188 ~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (293)
T cd05195         188 SGELLRASWRCLAPFGRFVEIGKRDILS----NSKLG-MRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVL  262 (293)
T ss_pred             CchHHHHHHHhcccCceEEEeecccccc----CCccc-hhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCc
Confidence            9989999999999999999988754211    01111 122445566655544332    22234578889999999999


Q ss_pred             eeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      .+.....+++++++++++.+.+++..+|+++
T Consensus       263 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         263 KPLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             ccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            8877778899999999999999888888874

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.97  E-value=8.1e-29  Score=206.38  Aligned_cols=252  Identities=23%  Similarity=0.293  Sum_probs=212.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      +++|.|..+|+++.+|++||+|+++   |++++|+.++.+. ++++ |++  ++. ++++++.+++++|+++.+.+++++
T Consensus        64 e~~G~v~~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~--~~~~~~~~~~~~~~ta~~~~~~~~~~~~  139 (325)
T TIGR02824        64 EVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQ-VLPV-PEG--LSLVEAAALPETFFTVWSNLFQRGGLKA  139 (325)
T ss_pred             eeEEEEEEeCCCCCCCCCCCEEEEccCCCcceeEEEecHHH-cEeC-CCC--CCHHHHHhhhHHHHHHHHHHHHhcCCCC
Confidence            4678888899999999999999986   7999999999999 9999 988  554 478899999999999878899999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g  159 (270)
                      +++++|+|+++++|++++++++..|++|+++++++++.+.++ ++|.+.+++.... ++...+.+..++ ++|+++||+|
T Consensus       140 ~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~  217 (325)
T TIGR02824       140 GETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVG  217 (325)
T ss_pred             CCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCch-hHHHHHHHHcCCCCeEEEEECCc
Confidence            999999999999999999999999999999999999888886 8998777777665 777778877765 8999999999


Q ss_pred             cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----ccchHHHHHHHHHHHHCCce
Q 042426          160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~  234 (270)
                      +.....++++++++|+++.+|.....    .. ..+...++.+++++.+......     +......+.++.+++.++.+
T Consensus       218 ~~~~~~~~~~l~~~g~~v~~g~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  292 (325)
T TIGR02824       218 GSYLNRNIKALALDGRIVQIGFQGGR----KA-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRV  292 (325)
T ss_pred             hHHHHHHHHhhccCcEEEEEecCCCC----cC-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcc
Confidence            88888999999999999999875421    11 3445555588999988876542     11234566778889999998


Q ss_pred             eeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      .+.....+++++++++++.+.+++..+|+++++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       293 RPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             cCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            877777899999999999999888889999864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1e-28  Score=205.99  Aligned_cols=252  Identities=25%  Similarity=0.364  Sum_probs=212.2

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec--------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhh
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL--------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHE   74 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~   74 (270)
                      .+++|+|..+|+++.+|++||+|+++        |++++|+.++++. ++++ |++  ++. ++++++.++.++|.++..
T Consensus        63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~~~~~~~~~~~a~~~~~~  138 (328)
T cd08268          63 YEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAA-VVKL-PDG--LSFVEAAALWMQYLTAYGALVE  138 (328)
T ss_pred             cceEEEEEeeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHh-cEeC-CCC--CCHHHHHHhhhHHHHHHHHHHH
Confidence            35778898999999999999999876        7899999999999 9999 988  555 478899999999999988


Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccE
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDI  153 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~  153 (270)
                      ...+.++++++|+|+++++|++++++++..|++++++++++++.+.++ ++|.+.+++.... ++.+.+.+...+ ++|+
T Consensus       139 ~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~  216 (328)
T cd08268         139 LAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDEE-DLVAEVLRITGGKGVDV  216 (328)
T ss_pred             hcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHhCCCCceE
Confidence            888999999999999999999999999999999999999999999997 8898888887766 777777777666 8999


Q ss_pred             EEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc---ccchHHHHHHHHHHHH
Q 042426          154 YFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF---YHQYPKFLELVMLAIK  230 (270)
Q Consensus       154 v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  230 (270)
                      +++++++.....++++++++|+++.+|....     .....+....+.+++++.+......   +......++.+.+++.
T Consensus       217 vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (328)
T cd08268         217 VFDPVGGPQFAKLADALAPGGTLVVYGALSG-----EPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLA  291 (328)
T ss_pred             EEECCchHhHHHHHHhhccCCEEEEEEeCCC-----CCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHH
Confidence            9999999888999999999999999886442     1122334445788888887765432   2344556777788888


Q ss_pred             CCceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          231 EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       231 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      ++.+.+.....+++++++++++.+.+++..+|++++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         292 SGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             CCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            998887766788999999999999988888899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.97  E-value=1.4e-28  Score=209.01  Aligned_cols=251  Identities=20%  Similarity=0.161  Sum_probs=198.8

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEe----------------------------------------cccceeeEeecCC--
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWG----------------------------------------LTSWEEFSLIQSP--   41 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~--   41 (270)
                      .+++|+|.++|++++.+++||+|++                                        .|+|++|++++.+  
T Consensus        59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~  138 (375)
T cd08282          59 HEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADF  138 (375)
T ss_pred             cccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccC
Confidence            3577888889999999999999975                                        1679999999975  


Q ss_pred             ccceeccCCCCCccc--cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH
Q 042426           42 QLLIKILDTSVPLPY--YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKV  118 (270)
Q Consensus        42 ~~~~~~~p~~~~~~~--~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~  118 (270)
                      . ++++ |++++...  .+++++.+++|||+++ ..+++++|++|+|.|+ |++|++++|+++.+|+ +|+++++++++.
T Consensus       139 ~-~~~l-P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~  214 (375)
T cd08282         139 N-LLKL-PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERL  214 (375)
T ss_pred             c-EEEC-CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            7 9999 99844332  3678888999999999 7789999999999765 9999999999999998 899988899999


Q ss_pred             HHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc------------hHHHHHHccccCCEEEEEccccccc
Q 042426          119 DLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK------------MLDAVLLNMRICGHIAVCGMISQYN  186 (270)
Q Consensus       119 ~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~  186 (270)
                      +.++ ++|++ .+++++. ++.+.+.+.+++++|+++||+|+.            .+..++++++++|+++.+|......
T Consensus       215 ~~~~-~~g~~-~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~  291 (375)
T cd08282         215 DLAE-SIGAI-PIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAED  291 (375)
T ss_pred             HHHH-HcCCe-EeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcc
Confidence            9888 89984 5677765 777777776656799999999976            3789999999999998887643211


Q ss_pred             ccC-------CCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcC
Q 042426          187 IEK-------PEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTG  257 (270)
Q Consensus       187 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~  257 (270)
                      ...       ....++...++.++..+.+...     ...+.++++.+++.++.+.+.  +..++++++++++++.+.++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~  366 (375)
T cd08282         292 PGAGDAAAKQGELSFDFGLLWAKGLSFGTGQA-----PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKR  366 (375)
T ss_pred             cccccccccCccccccHHHHHhcCcEEEEecC-----CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcC
Confidence            100       0122344455556665554322     124678889999999999873  67899999999999999998


Q ss_pred             CccceEEEEe
Q 042426          258 QNVGKQLVAV  267 (270)
Q Consensus       258 ~~~gk~vv~~  267 (270)
                      + .+|+|+++
T Consensus       367 ~-~~kvvv~~  375 (375)
T cd08282         367 L-ETKVVIKP  375 (375)
T ss_pred             C-ceEEEeCC
Confidence            8 88999853

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=99.97  E-value=1.3e-28  Score=208.71  Aligned_cols=250  Identities=18%  Similarity=0.215  Sum_probs=196.1

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccc
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSW   32 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (270)
                      .+++|+|.++|++++.|++||+|+..                                                   |+|
T Consensus        66 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  145 (373)
T cd08299          66 HEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTF  145 (373)
T ss_pred             ccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcc
Confidence            35778888899999999999999753                                                   689


Q ss_pred             eeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEE
Q 042426           33 EEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVG  110 (270)
Q Consensus        33 ~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~  110 (270)
                      +||++++++. ++++ |++  +++ +++++++++++||+++...+++++|++++|+|+ |++|++++++++.+|+ +|++
T Consensus       146 ~e~~~v~~~~-~~~l-P~~--l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~  220 (373)
T cd08299         146 SEYTVVDEIA-VAKI-DAA--APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIA  220 (373)
T ss_pred             cceEEecccc-eeeC-CCC--CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE
Confidence            9999999999 9999 998  555 488889899999998877889999999999974 9999999999999999 8999


Q ss_pred             EeCCHHHHHHHHHHhCCCceeecCCch-hHHHHHHhHcCCCccEEEeCCCc-chHHHHHHcc-ccCCEEEEEcccccccc
Q 042426          111 SARSKEKVDLLKHKFGFDDAFNYKEEP-DLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNM-RICGHIAVCGMISQYNI  187 (270)
Q Consensus       111 ~~~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~  187 (270)
                      +++++++.+.++ ++|++++++..+.+ ++.+.+.+.+.+++|+++||+|+ ..+..++..+ .++|+++.+|.....  
T Consensus       221 ~~~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~--  297 (373)
T cd08299         221 VDINKDKFAKAK-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS--  297 (373)
T ss_pred             EcCCHHHHHHHH-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC--
Confidence            999999999997 89999888876531 36677776665689999999996 4667767655 578999999875321  


Q ss_pred             cCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          188 EKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                        ....+... .+.++.++.+.+...+.  .++.+.++.+.+.++.+.  +.+.++|+++++++|++.+.+++. .|+++
T Consensus       298 --~~~~~~~~-~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~  371 (373)
T cd08299         298 --QNLSINPM-LLLTGRTWKGAVFGGWK--SKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVL  371 (373)
T ss_pred             --ceeecCHH-HHhcCCeEEEEEecCCc--cHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEE
Confidence              11122222 23467788887765432  134566677777777543  456688999999999999887664 47777


Q ss_pred             Ee
Q 042426          266 AV  267 (270)
Q Consensus       266 ~~  267 (270)
                      .+
T Consensus       372 ~~  373 (373)
T cd08299         372 TF  373 (373)
T ss_pred             eC
Confidence            53

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.97  E-value=8.8e-29  Score=207.72  Aligned_cols=241  Identities=18%  Similarity=0.232  Sum_probs=192.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-----------------------------------cccceeeEeecCCccceeccC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-----------------------------------LTSWEEFSLIQSPQLLIKILD   49 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~~~~~~~~~~p   49 (270)
                      +++|+|.++|++|++|++||+|++                                   .|+|++|++++++. ++++ |
T Consensus        60 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~-~~~i-P  137 (339)
T cd08232          60 EVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQ-CVPL-P  137 (339)
T ss_pred             cceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHH-eEEC-c
Confidence            578999999999999999999986                                   27899999999999 9999 9


Q ss_pred             CCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC
Q 042426           50 TSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD  128 (270)
Q Consensus        50 ~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~  128 (270)
                      ++  ++.+.|+++.+++++|+++.....+ ++++|||.| +|++|++++|+|+.+|+ +++++++++++.+.++ ++|++
T Consensus       138 ~~--~~~~~aa~~~~~~~a~~~l~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~  212 (339)
T cd08232         138 DG--LSLRRAALAEPLAVALHAVNRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGAD  212 (339)
T ss_pred             CC--CCHHHhhhcchHHHHHHHHHhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCC
Confidence            98  6654344568888999998776666 899999977 59999999999999999 8999998888888777 88998


Q ss_pred             ceeecCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceee
Q 042426          129 DAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICME  207 (270)
Q Consensus       129 ~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (270)
                      +++++++. ++.. ... ..+++|+++||.|+ ..++..+++|+++|+++.+|....      ....+....+.+++++.
T Consensus       213 ~vi~~~~~-~~~~-~~~-~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~  283 (339)
T cd08232         213 ETVNLARD-PLAA-YAA-DKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG------PVPLPLNALVAKELDLR  283 (339)
T ss_pred             EEEcCCch-hhhh-hhc-cCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccCcHHHHhhcceEEE
Confidence            88888765 4211 111 12269999999985 578899999999999999876331      11223344456777776


Q ss_pred             eccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          208 GFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +...      ..+.++++.+++.+|.+++  .+.+++++++++++++.+.+++..||+|+++
T Consensus       284 ~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         284 GSFR------FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             EEec------CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            6542      1356788999999998864  3567899999999999999888899999874

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.97  E-value=1.2e-28  Score=206.85  Aligned_cols=245  Identities=21%  Similarity=0.239  Sum_probs=196.5

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEe---------------------------c---ccceeeEeecCCccceeccCCCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWG---------------------------L---TSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~---------------------------~---g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      .+++|.|.++|+++++|++||+|++                           +   |+|++|++++++. ++++ |++  
T Consensus        61 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~--  136 (340)
T TIGR00692        61 HEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQN-IWKN-PKS--  136 (340)
T ss_pred             cceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHH-cEEC-cCC--
Confidence            3577888889999999999999986                           2   7899999999999 9999 998  


Q ss_pred             ccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      ++.+.++++.++.+|++++  ....++|++++|.| +|++|++++|+++.+|++ |+++.+++++.+.++ ++|++++++
T Consensus       137 ~~~~~a~~~~~~~~a~~~~--~~~~~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~  212 (340)
T TIGR00692       137 IPPEYATIQEPLGNAVHTV--LAGPISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVN  212 (340)
T ss_pred             CChHhhhhcchHHHHHHHH--HccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEc
Confidence            5545567788889999876  34578899999976 599999999999999996 888877888888887 899988888


Q ss_pred             cCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426          133 YKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL  210 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (270)
                      +++. ++.+.+.+..++ ++|+++||+|+ ..+...+++++++|+++.+|.....   .+ .. ....+..+++++.+..
T Consensus       213 ~~~~-~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~---~~-~~-~~~~~~~~~~~~~~~~  286 (340)
T TIGR00692       213 PFKE-DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK---VT-ID-FTNKVIFKGLTIYGIT  286 (340)
T ss_pred             cccc-CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC---cc-cc-hhhhhhhcceEEEEEe
Confidence            8776 788888877665 89999999885 5788899999999999999875321   11 11 1224555666666544


Q ss_pred             ccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          211 AGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ..    ...+.+.++.++++++.+.  +.+.+.+++++++++++.+.+++. ||+|+++
T Consensus       287 ~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       287 GR----HMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             cC----CchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence            21    2235678899999999986  456688999999999999988874 9999874

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.97  E-value=1.4e-28  Score=206.29  Aligned_cols=247  Identities=21%  Similarity=0.211  Sum_probs=202.8

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS   77 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~   77 (270)
                      +++|+|.++|++++.|++||+|+++      |+|++|+.+++++ ++++ |++  ++. +++.++..+.+||.++.+.++
T Consensus        66 e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~~~~~~~~~~~ta~~~l~~~~~  141 (336)
T cd08252          66 DASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERI-VGHK-PKS--LSFAEAAALPLTSLTAWEALFDRLG  141 (336)
T ss_pred             ceEEEEEEcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHH-eeeC-CCC--CCHHHhhhhhhHHHHHHHHHHHhcC
Confidence            5678888899999999999999985      7899999999999 9999 988  554 478889999999999878888


Q ss_pred             CCC-----CcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426           78 PKK-----GEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        78 ~~~-----g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      +.+     |++++|+|++|++|++++++++.+| ++|+++++++++.+.++ ++|+++++++++  ++.+.+.....+++
T Consensus       142 ~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~  218 (336)
T cd08252         142 ISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGADHVINHHQ--DLAEQLEALGIEPV  218 (336)
T ss_pred             CCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCC
Confidence            887     9999999999999999999999999 89999999999999997 899988888764  56666665433489


Q ss_pred             cEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-------ccchHHHHH
Q 042426          152 DIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-------YHQYPKFLE  223 (270)
Q Consensus       152 d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  223 (270)
                      |+++||+|+ ..+..++++++++|+++.+|...        ...+...+..+++++.+......       +....+.++
T Consensus       219 d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (336)
T cd08252         219 DYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--------EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILN  290 (336)
T ss_pred             CEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--------CcccchhhhcccceEEEEEeeccccccccchhhHHHHHH
Confidence            999999985 68899999999999999997632        12333344467778777554321       112346788


Q ss_pred             HHHHHHHCCceeeeee---eecCcccHHHHHHHHhcCCccceEEEE
Q 042426          224 LVMLAIKEGKLVYVED---IAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       224 ~~~~~~~~g~~~~~~~---~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      ++.+++.+|.+.+.+.   ..+++++++++++.+.+++..+|++++
T Consensus       291 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         291 EVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             HHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            8999999999987533   347999999999999999989999874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.97  E-value=9.1e-29  Score=207.77  Aligned_cols=244  Identities=21%  Similarity=0.237  Sum_probs=194.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|.++|++++.|++||+|++.                              |+|++|+.++++. ++++ |++  +
T Consensus        64 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-P~~--l  139 (341)
T PRK05396         64 EFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFN-VWKI-PDD--I  139 (341)
T ss_pred             eeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHH-eEEC-cCC--C
Confidence            5778888999999999999999863                              8999999999999 9999 998  5


Q ss_pred             cccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      +.+.+++..++.+++.++..  ...+|++++|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|+++++++
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~  215 (341)
T PRK05396        140 PDDLAAIFDPFGNAVHTALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNV  215 (341)
T ss_pred             CHHHhHhhhHHHHHHHHHHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecC
Confidence            65433455666667665532  3468999999874 9999999999999999 6888888888998888 8999989988


Q ss_pred             CCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426          134 KEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      ++. ++.+.+.+.+++ ++|++|||.|+ ..+..++++++++|+++.+|..+.     . .......+..++.++.++..
T Consensus       216 ~~~-~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~l~~~~~  288 (341)
T PRK05396        216 AKE-DLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-----D-MAIDWNKVIFKGLTIKGIYG  288 (341)
T ss_pred             ccc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-----C-CcccHHHHhhcceEEEEEEc
Confidence            876 788888887766 89999999986 578899999999999999987442     1 11224566667777776543


Q ss_pred             cCcccchHHHHHHHHHHHHCC-ceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426          212 GDFYHQYPKFLELVMLAIKEG-KLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      ...    .+.+..+.+++.++ ++.+.+.+.+++++++++++.+.+++ .||++++++
T Consensus       289 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        289 REM----FETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             cCc----cchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            221    23456778888888 45566678899999999999998877 799999874

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.97  E-value=1.5e-28  Score=207.27  Aligned_cols=256  Identities=20%  Similarity=0.202  Sum_probs=192.1

Q ss_pred             ccceEEEEeecCCC-CCCCCCEEEec--------ccceeeEeecCC----ccceeccCCCCCccc-cccccCchhhhHHH
Q 042426            5 SGYGVSKVLDSTHP-NYKKDDLVWGL--------TSWEEFSLIQSP----QLLIKILDTSVPLPY-YTGILGMPGLTAYG   70 (270)
Q Consensus         5 ~g~g~v~~vG~~v~-~~~~Gd~V~~~--------g~~~~~~~v~~~----~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~   70 (270)
                      +++|+|.++|++++ +|++||+|+++        |+|++|+++++.    . ++++ |++  ++. +++.++.++.|||+
T Consensus        65 e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~-~~~l-P~~--l~~~~aa~~~~~~~ta~~  140 (352)
T cd08247          65 DYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKS-ITRK-PEN--ISLEEAAAWPLVLGTAYQ  140 (352)
T ss_pred             eeEEEEEEeCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccce-eEEC-CCC--CCHHHHHHhHHHHHHHHH
Confidence            56788888999998 89999999874        799999999987    6 8999 988  555 58888999999999


Q ss_pred             Hhhhhc-CCCCCcEEEEecCCchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchh---HHHHHH
Q 042426           71 GLHELC-SPKKGEYVYVSAASGAVGQLVGQFVKLV-GC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPD---LDAALN  144 (270)
Q Consensus        71 ~l~~~~-~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~---~~~~i~  144 (270)
                      ++.+.+ ++++|++++|+|+++++|++++++|+.+ +. .++++. ++++.+.++ ++|++++++.++. +   +...+.
T Consensus       141 ~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~~  217 (352)
T cd08247         141 ILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK-KLGADHFIDYDAH-SGVKLLKPVL  217 (352)
T ss_pred             HHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH-HhCCCEEEecCCC-cccchHHHHH
Confidence            997777 7999999999999999999999999987 55 677776 556666776 8999888887765 4   444444


Q ss_pred             h-HcCC-CccEEEeCCCc-chHHHHHHccc---cCCEEEEEcccccccccC-CC----CccchHHHHhhcceeeeccccC
Q 042426          145 R-CFPE-GIDIYFENVGG-KMLDAVLLNMR---ICGHIAVCGMISQYNIEK-PE----GVHNLMQVVGKRICMEGFLAGD  213 (270)
Q Consensus       145 ~-~~~~-~~d~v~d~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~  213 (270)
                      + .+++ ++|++|||+|+ .....++++++   ++|+++.++.....+... ..    ........+.+++++.......
T Consensus       218 ~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (352)
T cd08247         218 ENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQF  297 (352)
T ss_pred             HhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEE
Confidence            4 3424 89999999998 57788999999   999999874321100000 00    0000011123344333333221


Q ss_pred             c-ccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          214 F-YHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       214 ~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      . .....+.++++.+++.++.+.+.+.+++++++++++++.+.+++..||+++++
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         298 FLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             EEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            1 11114678889999999999987778899999999999999998899999864

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd05281 TDH Threonine dehydrogenase

Probab=99.97  E-value=2.1e-28  Score=205.54  Aligned_cols=242  Identities=21%  Similarity=0.226  Sum_probs=194.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|..+|++++.|++||+|+++                              |+|++|++++++. ++++ |++  +
T Consensus        64 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~-~~~l-P~~--~  139 (341)
T cd05281          64 EFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEEN-LWKN-DKD--I  139 (341)
T ss_pred             ceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHH-cEEC-cCC--C
Confidence            5678888899999999999999873                              7899999999999 9999 988  5


Q ss_pred             cccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      +.+.++++.++.++++++.  ...++|++|+|+|+ |++|++++|+++.+|+ +|+++++++++.+.++ ++|+++++++
T Consensus       140 ~~~~a~~~~~~~~a~~~~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~  215 (341)
T cd05281         140 PPEIASIQEPLGNAVHTVL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINP  215 (341)
T ss_pred             CHHHhhhhhHHHHHHHHHH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCc
Confidence            5456677888888988774  45678999999875 9999999999999999 7999988888888888 8999888887


Q ss_pred             CCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426          134 KEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      +.. ++. .+.+..++ ++|++|||+|+ .....++++|+++|+++.+|.....   ...  ........+++.+.+...
T Consensus       216 ~~~-~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~--~~~~~~~~~~~~~~~~~~  288 (341)
T cd05281         216 REE-DVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP---VDI--DLNNLVIFKGLTVQGITG  288 (341)
T ss_pred             ccc-cHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC---ccc--ccchhhhccceEEEEEec
Confidence            765 777 78877776 89999999986 4778999999999999998864320   110  112234556666665542


Q ss_pred             cCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          212 GDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      ..    ..+.+.++.+++.++.+.  +.+...+++++++++++.+.+++ .||+|++
T Consensus       289 ~~----~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~  340 (341)
T cd05281         289 RK----MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLY  340 (341)
T ss_pred             CC----cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEec
Confidence            22    235577889999999976  34557789999999999999988 8999986

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.97  E-value=3.9e-28  Score=204.28  Aligned_cols=245  Identities=18%  Similarity=0.188  Sum_probs=198.3

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEe-c-----------------------------ccceeeEeecCC--ccceeccCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWG-L-----------------------------TSWEEFSLIQSP--QLLIKILDTS   51 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~-~-----------------------------g~~~~~~~v~~~--~~~~~~~p~~   51 (270)
                      .+++|+|.++|++++.+++||+|++ +                             |+|++|+.++.+  . ++++ |++
T Consensus        59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-P~~  136 (345)
T cd08287          59 HEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGT-LVKV-PGS  136 (345)
T ss_pred             cceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCc-eEEC-CCC
Confidence            3677889999999999999999986 1                             788999999974  7 9999 998


Q ss_pred             CCcccc----ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhC
Q 042426           52 VPLPYY----TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFG  126 (270)
Q Consensus        52 ~~~~~~----~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g  126 (270)
                      ++....    .+++...+++||+++ +.+++++|++++|.| +|++|++++|+|+..|++ ++++++++++.+.++ ++|
T Consensus       137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g  213 (345)
T cd08287         137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFG  213 (345)
T ss_pred             CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcC
Confidence            443111    124446788999998 468899999999976 699999999999999995 788887877888887 899


Q ss_pred             CCceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcc
Q 042426          127 FDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRI  204 (270)
Q Consensus       127 ~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  204 (270)
                      ++.++++++. ++.+.+.+.+++ ++|+++||+|+ ..+..++++++++|+++.+|....      ....+....+.+++
T Consensus       214 a~~v~~~~~~-~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~  286 (345)
T cd08287         214 ATDIVAERGE-EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG------GVELDVRELFFRNV  286 (345)
T ss_pred             CceEecCCcc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC------CCccCHHHHHhcce
Confidence            9999998876 788888887776 89999999986 588999999999999999886441      12244446677888


Q ss_pred             eeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          205 CMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      ++.+....     ..+.++++.+++.++.+++  .+...+++++++++++.+.+++.. |++|+
T Consensus       287 ~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  344 (345)
T cd08287         287 GLAGGPAP-----VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR  344 (345)
T ss_pred             EEEEecCC-----cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence            88774332     2567899999999999886  356788999999999998877654 99885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.97  E-value=5.5e-28  Score=204.71  Aligned_cols=243  Identities=17%  Similarity=0.183  Sum_probs=191.8

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSV   52 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~   52 (270)
                      .+++|+|.++|+++++|++||+|++                               .|+|++|++++++. ++++ |++ 
T Consensus        79 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~-~~~~-P~~-  155 (364)
T PLN02702         79 HECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADL-CFKL-PEN-  155 (364)
T ss_pred             cceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHH-eEEC-CCC-
Confidence            3577888899999999999999986                               27899999999999 9999 998 


Q ss_pred             CccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCcee
Q 042426           53 PLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAF  131 (270)
Q Consensus        53 ~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi  131 (270)
                       ++++.+++..++.++|+++ ...++.++++++|+| +|++|++++++++.+|++ ++++++++++.+.++ ++|++.++
T Consensus       156 -l~~~~aa~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~  231 (364)
T PLN02702        156 -VSLEEGAMCEPLSVGVHAC-RRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIV  231 (364)
T ss_pred             -CCHHHHhhhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEE
Confidence             5654333334556688887 678899999999997 599999999999999995 777777888888887 89998776


Q ss_pred             ecC--CchhHHHHHHhH---cCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcce
Q 042426          132 NYK--EEPDLDAALNRC---FPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRIC  205 (270)
Q Consensus       132 ~~~--~~~~~~~~i~~~---~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  205 (270)
                      ++.  +. ++.+.+.+.   .++++|++|||+|+ ..+..++++++++|+++.+|....     . ..........++++
T Consensus       232 ~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~  304 (364)
T PLN02702        232 LVSTNIE-DVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN-----E-MTVPLTPAAAREVD  304 (364)
T ss_pred             ecCcccc-cHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-----C-CcccHHHHHhCccE
Confidence            653  33 666666544   23379999999994 688999999999999999986431     1 22345566777888


Q ss_pred             eeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCc--ccHHHHHHHHhcCCccceEEEE
Q 042426          206 MEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGL--EKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      +.+++..      ...++.+.++++++.+.  +.+..+|++  +++++|++.+.+++..+|+++.
T Consensus       305 i~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        305 VVGVFRY------RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             EEEeccC------hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            8876542      24678889999999885  445677555  7999999999988888999985

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.97  E-value=6.2e-28  Score=202.17  Aligned_cols=240  Identities=26%  Similarity=0.339  Sum_probs=193.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|..+|+++++|++||+|++                              .|+|++|++++++. ++++ |++  +
T Consensus        59 ~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~--~  134 (334)
T cd08234          59 EFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQ-VYKI-PDN--L  134 (334)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHH-cEEC-cCC--C
Confidence            577888889999999999999976                              27899999999999 9999 998  5


Q ss_pred             ccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceee
Q 042426           55 PYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        55 ~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      +.. ++.+ ..+.++++++ ..+++++|++|+|+|+ |++|++++++|+.+|++ |+++++++++.+.++ ++|++.+++
T Consensus       135 ~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~  210 (334)
T cd08234         135 SFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVD  210 (334)
T ss_pred             CHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEec
Confidence            543 4444 7788999988 7789999999999975 99999999999999997 888998999999997 899887888


Q ss_pred             cCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426          133 YKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      +.+. ++... +...++++|+++||+|. .....++++++++|+++.+|.....    .....+...++.+++++.+...
T Consensus       211 ~~~~-~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~  284 (334)
T cd08234         211 PSRE-DPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQKELTIIGSFI  284 (334)
T ss_pred             CCCC-CHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHhCCcEEEEecc
Confidence            7765 55544 33333489999999975 5788999999999999999875421    1122334444557777776653


Q ss_pred             cCcccchHHHHHHHHHHHHCCceeee--eeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          212 GDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      .      .+.++++.+++.++.+.+.  +..++++++++++++.+.+ ...+|+|+
T Consensus       285 ~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         285 N------PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             C------HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            2      3568889999999998753  5678999999999999998 77889886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=3.2e-28  Score=203.66  Aligned_cols=249  Identities=21%  Similarity=0.245  Sum_probs=195.0

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      +++|.|.++|++++.|++||+|+++   |+|++|+.++++. ++++ |++  ++. ++++++.++.+||+++.+.+++.+
T Consensus        64 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~a~~~~~~~~ta~~~l~~~~~~~~  139 (331)
T cd08273          64 DLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKY-LVPV-PEG--VDAAEAVCLVLNYVTAYQMLHRAAKVLT  139 (331)
T ss_pred             ceEEEEEEeCCCCccCCCCCEEEEeCCCcceeeEEEechHH-eEEC-CCC--CCHHHHHhhhhHHHHHHHHHHHhcCCCC
Confidence            5678888999999999999999986   8999999999999 9999 988  554 478899999999999988789999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      |++++|+|++|++|++++++++..|++|+++++ +++.+.++ ++|+. .++.... ++...  +...+++|+++||+++
T Consensus       140 g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~-~~~~~~~-~~~~~--~~~~~~~d~vl~~~~~  213 (331)
T cd08273         140 GQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGAT-PIDYRTK-DWLPA--MLTPGGVDVVFDGVGG  213 (331)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCe-EEcCCCc-chhhh--hccCCCceEEEECCch
Confidence            999999999999999999999999999999997 88888887 88865 3455544 45444  3333479999999999


Q ss_pred             chHHHHHHccccCCEEEEEcccccccccCCCCccch------------HHHHhhcceeeeccccC--cccchHHHHHHHH
Q 042426          161 KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL------------MQVVGKRICMEGFLAGD--FYHQYPKFLELVM  226 (270)
Q Consensus       161 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  226 (270)
                      .....++++++++|+++.+|.......  .....+.            .....+++++.+.....  .+....+.+.++.
T Consensus       214 ~~~~~~~~~l~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  291 (331)
T cd08273         214 ESYEESYAALAPGGTLVCYGGNSSLLQ--GRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELL  291 (331)
T ss_pred             HHHHHHHHHhcCCCEEEEEccCCCCCC--ccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHH
Confidence            888999999999999999987543211  0000100            01112233333322211  1233457889999


Q ss_pred             HHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          227 LAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       227 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      +++.+|.+.+.+..++++++++++++.+.+++..||+|+
T Consensus       292 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         292 DLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            999999998877788999999999999998888889885

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.96  E-value=7.6e-28  Score=200.79  Aligned_cols=246  Identities=21%  Similarity=0.233  Sum_probs=195.0

Q ss_pred             cceEEEEeecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhh-
Q 042426            6 GYGVSKVLDSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHE-   74 (270)
Q Consensus         6 g~g~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~-   74 (270)
                      ++|+|..  ++++++++||+|+++         |+|++|+.++.+. ++++ |++  ++. +++.++..+++++.++.. 
T Consensus        65 ~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~--~~~~~~~~~~~~~~ta~~~~~~~  138 (324)
T cd08288          65 LAGTVVE--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADW-LVPL-PEG--LSARQAMAIGTAGFTAMLCVMAL  138 (324)
T ss_pred             eEEEEEe--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHH-eeeC-CCC--CCHHHHhhhhhHHHHHHHHHHHH
Confidence            4555555  777889999999973         7899999999999 9999 998  555 488889999999877641 


Q ss_pred             -hcCCC-CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCcc
Q 042426           75 -LCSPK-KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        75 -~~~~~-~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                       ..+.. ++++++|+|++|++|++++|+|+.+|++|++++.++++.+.++ ++|+++++++++. .  ..+....++++|
T Consensus       139 ~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~--~~~~~~~~~~~~  214 (324)
T cd08288         139 EDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEIIDRAEL-S--EPGRPLQKERWA  214 (324)
T ss_pred             hhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEEEcchh-h--HhhhhhccCccc
Confidence             23444 6789999999999999999999999999999999999999997 8999888887653 2  245555555689


Q ss_pred             EEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcc-cchHHHHHHHHHHHHC
Q 042426          153 IYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFY-HQYPKFLELVMLAIKE  231 (270)
Q Consensus       153 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  231 (270)
                      .++|++++..+...+..++.+|+++.+|....     .....+...++.+++++.+.+..... ....+.+..+.+++.+
T Consensus       215 ~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (324)
T cd08288         215 GAVDTVGGHTLANVLAQTRYGGAVAACGLAGG-----ADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDP  289 (324)
T ss_pred             EEEECCcHHHHHHHHHHhcCCCEEEEEEecCC-----CCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhc
Confidence            99999998777788889999999999987531     11123344455788898887644331 2345677888888999


Q ss_pred             CceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          232 GKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       232 g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +.+.+. ...+++++++++++.+.+++..+|+++++
T Consensus       290 ~~~~~i-~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         290 ALLEAL-TREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             CCcccc-ceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            988764 57899999999999999999999999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=8.6e-28  Score=200.36  Aligned_cols=246  Identities=23%  Similarity=0.339  Sum_probs=204.7

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec--------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhh
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL--------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHEL   75 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~   75 (270)
                      +++|.|..+|+++.+|++||+|+++        |+|++|+.+++++ ++++ |++  ++. .++.++..+.+||+++.+.
T Consensus        64 e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~--~~~~~~~~~~~~~~~a~~~l~~~  139 (326)
T cd08272          64 DVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARL-LALK-PAN--LSMREAAALPLVGITAWEGLVDR  139 (326)
T ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHH-cccC-CCC--CCHHHHHHhHHHHHHHHHHHHHh
Confidence            5678898999999999999999985        6899999999999 9999 988  555 4788888999999998788


Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEE
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIY  154 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v  154 (270)
                      +++++|++++|+|+++++|++++++++..|++|++++++ ++.+.++ ++|++.+++...  .+.+.+.+.+++ ++|.+
T Consensus       140 ~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~v  215 (326)
T cd08272         140 AAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYRE--TVVEYVAEHTGGRGFDVV  215 (326)
T ss_pred             cCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecch--hHHHHHHHhcCCCCCcEE
Confidence            999999999999999999999999999999999999987 8888887 899887777654  366777777776 89999


Q ss_pred             EeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC--c----ccchHHHHHHHHHH
Q 042426          155 FENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD--F----YHQYPKFLELVMLA  228 (270)
Q Consensus       155 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~  228 (270)
                      +||+++.....+++++.++|+++.++...         .........+++++.+.....  .    +....+.+.++.++
T Consensus       216 ~~~~~~~~~~~~~~~l~~~g~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (326)
T cd08272         216 FDTVGGETLDASFEAVALYGRVVSILGGA---------THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARL  286 (326)
T ss_pred             EECCChHHHHHHHHHhccCCEEEEEecCC---------ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHH
Confidence            99999888888999999999999987642         011122336677777665432  1    22345678889999


Q ss_pred             HHCCceeeeee-eecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          229 IKEGKLVYVED-IAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       229 ~~~g~~~~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +.++.+.+.++ ..+++++++++++.+.+++..+|+++++
T Consensus       287 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         287 VERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            99999987755 7899999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.96  E-value=7.4e-28  Score=200.34  Aligned_cols=251  Identities=24%  Similarity=0.328  Sum_probs=210.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      +++|.|..+|+++..+++||+|+++   |++++|+.++++. ++++ |++  ++. ++++++.++.+||.++.....+++
T Consensus        64 e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~  139 (323)
T cd08241          64 EVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAA-VFPL-PDG--LSFEEAAALPVTYGTAYHALVRRARLQP  139 (323)
T ss_pred             eeEEEEEEeCCCCCCCCCCCEEEEecCCceeEEEEEcCHHH-ceeC-CCC--CCHHHHhhhhhHHHHHHHHHHHhcCCCC
Confidence            4678888899999999999999996   7999999999999 9999 988  444 477789999999999877888999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g  159 (270)
                      +++++|+|++|++|++++++++..|++|+++++++++.+.++ ++|++.+++.... ++.+.+.+.+++ ++|.++||+|
T Consensus       140 ~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~g  217 (323)
T cd08241         140 GETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVG  217 (323)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCCc-cHHHHHHHHcCCCCcEEEEECcc
Confidence            999999999999999999999999999999999999999997 8898878877776 788888887776 8999999999


Q ss_pred             cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcc----cchHHHHHHHHHHHHCCcee
Q 042426          160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFY----HQYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~  235 (270)
                      +.....++++++++|+++.+|....     .....+....+.+++++.+.....+.    ....+.+.++.+++.++.+.
T Consensus       218 ~~~~~~~~~~~~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (323)
T cd08241         218 GDVFEASLRSLAWGGRLLVIGFASG-----EIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR  292 (323)
T ss_pred             HHHHHHHHHhhccCCEEEEEccCCC-----CcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcc
Confidence            8888899999999999999886431     11112233456688888887765441    12346788899999999998


Q ss_pred             eeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          236 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       236 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      +.....|++++++++++.+.++...+|++++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         293 PHVSAVFPLEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             cccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence            7777889999999999999988888888863

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.96  E-value=7.1e-28  Score=201.08  Aligned_cols=233  Identities=26%  Similarity=0.330  Sum_probs=188.8

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|.|..+|++++.|++||+|+++                              |+|++|+.++++. ++++ |++  +
T Consensus        61 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~--~  136 (325)
T cd08264          61 EFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKN-LFKI-PDS--I  136 (325)
T ss_pred             ceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHH-ceeC-CCC--C
Confidence            5678888899999999999999853                              7899999999999 9999 998  5


Q ss_pred             cc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      +. +++.++.++.+||+++.. +++++|++++|+|++|++|++++++|+.+|++|+++++    .+.++ ++|++++++.
T Consensus       137 ~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-~~g~~~~~~~  210 (325)
T cd08264         137 SDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-EFGADEVVDY  210 (325)
T ss_pred             CHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-HhCCCeeecc
Confidence            54 588889999999999855 88999999999999999999999999999999988873    36666 7998888776


Q ss_pred             CCchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC
Q 042426          134 KEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD  213 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (270)
                      ++   ..+.+.+.+ +++|+++|++|+..+..++++++++|+++.+|....     .....+...+..++.++.+...+.
T Consensus       211 ~~---~~~~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  281 (325)
T cd08264         211 DE---VEEKVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTG-----GEVKLDLSDLYSKQISIIGSTGGT  281 (325)
T ss_pred             hH---HHHHHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCC-----CCCccCHHHHhhcCcEEEEccCCC
Confidence            43   344555555 679999999998889999999999999999986421     123345556666777777765433


Q ss_pred             cccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceE
Q 042426          214 FYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQ  263 (270)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~  263 (270)
                           ++.++++.+++...+  ..+...|+++++++|++.+.+++..+|+
T Consensus       282 -----~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         282 -----RKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             -----HHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence                 467788888886444  4456789999999999999988777775

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.96  E-value=3.8e-28  Score=204.72  Aligned_cols=253  Identities=23%  Similarity=0.339  Sum_probs=192.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS   77 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~   77 (270)
                      +++|+|..+|+++++|++||+|+++      |+|++|+.++++. ++++ |++  ++. +++.++.++.+||+++...+.
T Consensus        80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~--~~~~~aa~~~~~~~ta~~~l~~~~~  155 (350)
T cd08248          80 DCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENE-VSKK-PKN--LSHEEAASLPYAGLTAWSALVNVGG  155 (350)
T ss_pred             eeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHH-eecC-CCC--CCHHHHhhchhHHHHHHHHHHHhcc
Confidence            4668888899999999999999983      8999999999999 9999 998  554 488899999999999877777


Q ss_pred             CCC----CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           78 PKK----GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        78 ~~~----g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      +.+    |++++|+|++|++|++++++++.+|++|++++++ ++.+.++ ++|.+++++..+. ++.+.+...  +++|+
T Consensus       156 ~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~--~~vd~  230 (350)
T cd08248         156 LNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDVIDYNNE-DFEEELTER--GKFDV  230 (350)
T ss_pred             CCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceEEECCCh-hHHHHHHhc--CCCCE
Confidence            754    9999999999999999999999999999998855 5677777 8999888887765 566555432  37999


Q ss_pred             EEeCCCcchHHHHHHccccCCEEEEEcccccccccC-CC--Cccc-hHHHHhhcce-ee-eccc-cCcccchHHHHHHHH
Q 042426          154 YFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEK-PE--GVHN-LMQVVGKRIC-ME-GFLA-GDFYHQYPKFLELVM  226 (270)
Q Consensus       154 v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~--~~~~-~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~  226 (270)
                      ++||+|+.....++++++++|+++.+|......... ..  ..+. ...+...... +. +... +.......+.+.++.
T Consensus       231 vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (350)
T cd08248         231 ILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELA  310 (350)
T ss_pred             EEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHH
Confidence            999999988999999999999999998643210000 00  0000 0011111110 00 0000 000122357789999


Q ss_pred             HHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          227 LAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       227 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      +++.+|.+.+.+...+++++++++++.+.+++..+|++++
T Consensus       311 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         311 KLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            9999999988777889999999999999988888888863

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.96  E-value=7.4e-28  Score=196.57  Aligned_cols=240  Identities=22%  Similarity=0.243  Sum_probs=188.2

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEecccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCc
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGE   82 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~   82 (270)
                      .+++|+|.++|+++++|++||+|+++++|++|++++++. ++++ |++  ++. +++.+ .++++||+++. .+++++|+
T Consensus        26 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~v~~~~-~~~i-p~~--l~~~~aa~~-~~~~ta~~~~~-~~~~~~g~   99 (277)
T cd08255          26 YSSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANL-LVPL-PDG--LPPERAALT-ALAATALNGVR-DAEPRLGE   99 (277)
T ss_pred             cceeEEEEEeCCCCCCCCCCCEEEecCCcceEEEcCHHH-eeEC-cCC--CCHHHhHHH-HHHHHHHHHHH-hcCCCCCC
Confidence            456688888999999999999999999999999999999 9999 988  554 45666 78999999984 78999999


Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhC-CCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFG-FDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +++|+|+ |++|++++++|+.+|++ |+++++++++.+.++ ++| ++++++....        ....+++|++|||++.
T Consensus       100 ~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~--------~~~~~~~d~vl~~~~~  169 (277)
T cd08255         100 RVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTAD--------EIGGRGADVVIEASGS  169 (277)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccchh--------hhcCCCCCEEEEccCC
Confidence            9999974 99999999999999998 999999999999887 888 4544433221        0122379999999885


Q ss_pred             -chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcc-------cchHHHHHHHHHHHHCC
Q 042426          161 -KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFY-------HQYPKFLELVMLAIKEG  232 (270)
Q Consensus       161 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g  232 (270)
                       .....++++++++|+++.+|.....      .......+..+.+++.+.......       ....+.++++.+++.++
T Consensus       170 ~~~~~~~~~~l~~~g~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  243 (277)
T cd08255         170 PSALETALRLLRDRGRVVLVGWYGLK------PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEG  243 (277)
T ss_pred             hHHHHHHHHHhcCCcEEEEEeccCCC------ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcC
Confidence             5788999999999999999875421      111122344455577766654321       12236789999999999


Q ss_pred             ceeeeeeeecCcccHHHHHHHHhcC-CccceEEE
Q 042426          233 KLVYVEDIAEGLEKAPSALVGIFTG-QNVGKQLV  265 (270)
Q Consensus       233 ~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv  265 (270)
                      .+.+.+...+++++++++++.+.++ ....|+++
T Consensus       244 ~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         244 RLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             CccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence            9988777889999999999999877 35567653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=3.7e-27  Score=196.59  Aligned_cols=247  Identities=21%  Similarity=0.320  Sum_probs=202.5

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS   77 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~   77 (270)
                      +++|.|..+|++++++++||+|+++      |+|++|+.++++. ++++ |++  ++. +++.+++++.+|++++.+.++
T Consensus        63 e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~-~~~i-p~~--~~~~~~a~~~~~~~~a~~~~~~~~~  138 (325)
T cd08271          63 DGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARA-VLPL-PDS--LSFEEAAALPCAGLTAYQALFKKLR  138 (325)
T ss_pred             ceEEEEEEeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHH-eEEC-CCC--CCHHHHHhhhhhHHHHHHHHHHhcC
Confidence            5678888899999999999999985      7899999999999 9999 988  554 478899999999999988889


Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEe
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFE  156 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d  156 (270)
                      +++|++++|+|+++++|++++++++..|++|+++. ++++.+.+. ++|++.+++.... ++.+.+.+...+ ++|.++|
T Consensus       139 ~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~  215 (325)
T cd08271         139 IEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLD  215 (325)
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCCc-cHHHHHHHHcCCCCCcEEEE
Confidence            99999999999989999999999999999999888 777888887 8999888887776 777778877766 8999999


Q ss_pred             CCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc----c----cchHHHHHHHHHH
Q 042426          157 NVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF----Y----HQYPKFLELVMLA  228 (270)
Q Consensus       157 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~  228 (270)
                      |+++.....++++++++|+++.++.....    .     ....+.+++.+....+...    +    ....+.+.++.++
T Consensus       216 ~~~~~~~~~~~~~l~~~G~~v~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (325)
T cd08271         216 TVGGETAAALAPTLAFNGHLVCIQGRPDA----S-----PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLEL  286 (325)
T ss_pred             CCCcHhHHHHHHhhccCCEEEEEcCCCCC----c-----chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHH
Confidence            99988778899999999999998754321    0     1122344444444333221    1    2344667889999


Q ss_pred             HHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          229 IKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       229 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +.++.+.+.....++++++.++++.+.+++..+|+++++
T Consensus       287 ~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         287 LAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            999999887667899999999999999888889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.96  E-value=4.4e-27  Score=196.70  Aligned_cols=238  Identities=23%  Similarity=0.287  Sum_probs=194.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEE----------------------------ec---ccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVW----------------------------GL---TSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~----------------------------~~---g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|..+|+++++|++||+|+                            ++   |++++|+.++++. ++++ |++  
T Consensus        60 e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~--  135 (330)
T cd08245          60 EIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEY-TVLL-PDG--  135 (330)
T ss_pred             cceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHH-eEEC-CCC--
Confidence            57788999999999999999997                            32   7899999999999 9999 998  


Q ss_pred             ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      ++. +++.++..+++||.++.. .+++++++|+|+|+ |++|++++++|+.+|++|+++++++++.+.++ ++|++.+++
T Consensus       136 ~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~  212 (330)
T cd08245         136 LPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVD  212 (330)
T ss_pred             CCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEec
Confidence            554 578899999999999855 78999999999975 88999999999999999999999999999997 899887777


Q ss_pred             cCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426          133 YKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      ..+. +....    ..+++|+++||++. .....++++++++|+++.++....     .....+...+..++.++.+...
T Consensus       213 ~~~~-~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  282 (330)
T cd08245         213 SGAE-LDEQA----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPES-----PPFSPDIFPLIMKRQSIAGSTH  282 (330)
T ss_pred             cCCc-chHHh----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCC-----CccccchHHHHhCCCEEEEecc
Confidence            6654 33332    22369999999875 678899999999999999986432     1112223446667777777665


Q ss_pred             cCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          212 GDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      ..     .+.++++.+++.++.+.+ ....+++++++++++.+.+++..+|+|+
T Consensus       283 ~~-----~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         283 GG-----RADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             CC-----HHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            43     467888899999999886 3467899999999999999998899875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=7e-27  Score=195.86  Aligned_cols=256  Identities=24%  Similarity=0.368  Sum_probs=204.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      +++|.|..+|+++.+|++||+|+++   |+|++|+.++.+. ++++ |++  ++. +++.++.+++++|+++...+++++
T Consensus        63 e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~  138 (337)
T cd08275          63 ECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQ-VFPL-PDG--MSFEEAAAFPVNYLTAYYALFELGNLRP  138 (337)
T ss_pred             eeEEEEEEECCCCcCCCCCCEEEEecCCCeeeeEEEecHHH-eEEC-CCC--CCHHHHhhhhHHHHHHHHHHHHhhCCCC
Confidence            5678888899999999999999997   7999999999999 9999 988  554 478888999999999988899999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      |++++|+|++|++|++++++++.+ +..++... .+++.+.++ .+|++.+++.... ++...+...+++++|+++||+|
T Consensus       139 ~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~g  215 (337)
T cd08275         139 GQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALG  215 (337)
T ss_pred             CCEEEEEcCcchHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCCCC-cHHHHHHHHhCCCceEEEECCc
Confidence            999999999999999999999998 43443332 455778887 8998888887776 7878887776558999999999


Q ss_pred             cchHHHHHHccccCCEEEEEcccccccccCC-----------CCccchHHHHhhcceeeeccccCcc---cchHHHHHHH
Q 042426          160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKP-----------EGVHNLMQVVGKRICMEGFLAGDFY---HQYPKFLELV  225 (270)
Q Consensus       160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  225 (270)
                      +.....++++++++|+++.+|..........           .........+.+++++.+.......   ......+.++
T Consensus       216 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (337)
T cd08275         216 GEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKL  295 (337)
T ss_pred             HHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHH
Confidence            9888999999999999999986542110000           0112224556778888887764321   1223467888


Q ss_pred             HHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          226 MLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       226 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      .+++.++.+.+.....|++++++++++.+.+++..+|+++++
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         296 LKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            899999999887778899999999999999988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.96  E-value=1.2e-26  Score=194.02  Aligned_cols=232  Identities=18%  Similarity=0.124  Sum_probs=188.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|.++|+++.+|++||+|++                               .|+|++|+.++.+. ++++ |++  
T Consensus        65 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~--  140 (329)
T cd08298          65 EIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERF-AYPI-PED--  140 (329)
T ss_pred             cccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchh-EEEC-CCC--
Confidence            578899999999999999999975                               27899999999999 9999 998  


Q ss_pred             ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      ++. ++++++++++|||+++ ..++++++++++|+| +|++|++++++++..|++|+++++++++.+.++ ++|++++++
T Consensus       141 ~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~  217 (329)
T cd08298         141 YDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGD  217 (329)
T ss_pred             CCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEec
Confidence            554 5889999999999999 889999999999997 599999999999999999999999999999997 899877776


Q ss_pred             cCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426          133 YKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      ....          ..+++|+++++.+. ..++.++++++++|+++.+|....     .....+... +.++..+.+...
T Consensus       218 ~~~~----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~-~~~~~~i~~~~~  281 (329)
T cd08298         218 SDDL----------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDYEL-LWGEKTIRSVAN  281 (329)
T ss_pred             cCcc----------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccchhh-hhCceEEEEecC
Confidence            5431          12369999998654 588999999999999998875221     111122222 334555554433


Q ss_pred             cCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          212 GDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      .     ..+.++++.++++++.+++. ..+++++++++|++.+.+++..||+|+
T Consensus       282 ~-----~~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         282 L-----TRQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             C-----CHHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            2     24678889999999998874 478999999999999999999999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=7.3e-27  Score=194.52  Aligned_cols=229  Identities=21%  Similarity=0.213  Sum_probs=181.1

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSV   52 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~   52 (270)
                      .+++|+|.++|++   +++||+|..                               .|+|++|+++++++ ++++ |++ 
T Consensus        56 ~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~-  129 (319)
T cd08242          56 HEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLEN-LHVV-PDL-  129 (319)
T ss_pred             ceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHH-eEEC-cCC-
Confidence            4577888889987   679999962                               27899999999999 9999 998 


Q ss_pred             CccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           53 PLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        53 ~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                       ++.+.+++..+..++|.++ +..+++++++|+|+| +|++|++++|+|+.+|++|+++++++++.+.++ ++|++.+++
T Consensus       130 -~~~~~aa~~~~~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~  205 (319)
T cd08242         130 -VPDEQAVFAEPLAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLP  205 (319)
T ss_pred             -CCHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeC
Confidence             5554333325556677665 678899999999997 599999999999999999999999999999999 799987766


Q ss_pred             cCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426          133 YKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      +++.         ..++++|+++||+|+ ..+..++++++++|+++..+...      .....+...+..++.++.+...
T Consensus       206 ~~~~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~------~~~~~~~~~~~~~~~~i~~~~~  270 (319)
T cd08242         206 DEAE---------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYA------GPASFDLTKAVVNEITLVGSRC  270 (319)
T ss_pred             cccc---------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccC------CCCccCHHHheecceEEEEEec
Confidence            5431         122379999999987 57889999999999999866532      1223445566677888877654


Q ss_pred             cCcccchHHHHHHHHHHHHCCce--eeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          212 GDFYHQYPKFLELVMLAIKEGKL--VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      ..        ++++.+++.++++  .+.+.+.|+++++++|++.+.++. .+|+|++
T Consensus       271 ~~--------~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~  318 (319)
T cd08242         271 GP--------FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR  318 (319)
T ss_pred             cc--------HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence            32        6788899999998  556778999999999999998765 5799885

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=1.4e-26  Score=192.59  Aligned_cols=243  Identities=26%  Similarity=0.317  Sum_probs=188.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS   77 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~   77 (270)
                      +++|.|.++|+++++|++||+|+++      |++++|+.++++. ++++ |++  ++. +++.+++++.+||+++....+
T Consensus        65 e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~--~~~~~~~~~~~~~~~a~~~~~~~~~  140 (319)
T cd08267          65 DFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESG-LAKK-PEG--VSFEEAAALPVAGLTALQALRDAGK  140 (319)
T ss_pred             eeeEEEEEeCCCCCCCCCCCEEEEeccCCCCceeeEEEEechhh-eEEC-CCC--CCHHHHHhhhhHHHHHHHHHHHhcC
Confidence            5678888899999999999999985      7899999999999 9999 998  554 588899999999999988888


Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEe
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFE  156 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d  156 (270)
                      +++|++++|+|++|++|++++++++.+|++|++++++ ++.+.++ ++|.+++++.... ++.   .....+ ++|+++|
T Consensus       141 ~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~---~~~~~~~~~d~vi~  214 (319)
T cd08267         141 VKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVR-SLGADEVIDYTTE-DFV---ALTAGGEKYDVIFD  214 (319)
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHH-HcCCCEeecCCCC-Ccc---hhccCCCCCcEEEE
Confidence            9999999999999999999999999999999999865 8888887 8998888877654 443   333444 8999999


Q ss_pred             CCCcc--hHHHHHHccccCCEEEEEcccccccccCCCCccc--hHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCC
Q 042426          157 NVGGK--MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHN--LMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEG  232 (270)
Q Consensus       157 ~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  232 (270)
                      |+++.  .....+..++++|+++.+|......   .. ...  ..........+......  +  ..+.+.++.+++.++
T Consensus       215 ~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~l~~~  286 (319)
T cd08267         215 AVGNSPFSLYRASLALKPGGRYVSVGGGPSGL---LL-VLLLLPLTLGGGGRRLKFFLAK--P--NAEDLEQLAELVEEG  286 (319)
T ss_pred             CCCchHHHHHHhhhccCCCCEEEEeccccccc---cc-cccccchhhccccceEEEEEec--C--CHHHHHHHHHHHHCC
Confidence            99853  3344444599999999998754211   10 000  00111111222221111  1  167889999999999


Q ss_pred             ceeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          233 KLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       233 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      .+.+.+...+++++++++++.+.+++..+|+++
T Consensus       287 ~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         287 KLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             CeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence            998887788999999999999998887888874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.95  E-value=2e-26  Score=190.57  Aligned_cols=210  Identities=23%  Similarity=0.314  Sum_probs=175.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|..+|++++.|++||+|++.                               |+|++|+++++++ ++++ |++  
T Consensus        62 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~--  137 (306)
T cd08258          62 EFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEES-LHEL-PEN--  137 (306)
T ss_pred             ceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHH-eEEC-cCC--
Confidence            4678888899999999999999873                               7899999999999 9999 999  


Q ss_pred             ccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHHHhCCCcee
Q 042426           54 LPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA--RSKEKVDLLKHKFGFDDAF  131 (270)
Q Consensus        54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~--~~~~~~~~~~~~~g~~~vi  131 (270)
                      ++++.++++..++++|+++...++++++++|+|.| +|++|++++|+|+.+|++|++++  +++++.+.++ ++|++++ 
T Consensus       138 ~~~~~aa~~~~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~-  214 (306)
T cd08258         138 LSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV-  214 (306)
T ss_pred             CCHHHHHhhchHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-
Confidence            56544458888999999998889999999999976 69999999999999999988773  3455777777 8999877 


Q ss_pred             ecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426          132 NYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF  209 (270)
Q Consensus       132 ~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (270)
                      ++... ++.+.+.+..++ ++|+++||+|+ ..+...+++|+++|+++.+|....     ....++...++.+++++.|+
T Consensus       215 ~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~i~g~  288 (306)
T cd08258         215 NGGEE-DLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP-----LAASIDVERIIQKELSVIGS  288 (306)
T ss_pred             CCCcC-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----CCcccCHHHHhhcCcEEEEE
Confidence            77776 888888887765 89999999975 588899999999999999988652     22345667777899999999


Q ss_pred             cccCcccchHHHHHHHHHHHHCC
Q 042426          210 LAGDFYHQYPKFLELVMLAIKEG  232 (270)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~g  232 (270)
                      +.+.     .++++++++++++|
T Consensus       289 ~~~~-----~~~~~~~~~~~~~~  306 (306)
T cd08258         289 RSST-----PASWETALRLLASG  306 (306)
T ss_pred             ecCc-----hHhHHHHHHHHhcC
Confidence            8865     46688888888765

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.95  E-value=2.3e-26  Score=190.30  Aligned_cols=237  Identities=24%  Similarity=0.369  Sum_probs=194.7

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS   77 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~   77 (270)
                      +++|.|..+|++++++++||+|+++      |++++|+.++++. ++++ |++  ++. .++.++..+.++|+++.....
T Consensus        66 e~~G~v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~--~~~~~~~~~~~~~~~a~~~~~~~~~  141 (309)
T cd05289          66 DVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADE-LALK-PAN--LSFEEAAALPLAGLTAWQALFELGG  141 (309)
T ss_pred             ceeEEEEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHH-hccC-CCC--CCHHHHHhhhHHHHHHHHHHHhhcC
Confidence            4568888899999999999999985      7999999999999 9999 988  444 477888899999999988778


Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      +.++++++|+|++|++|++++++++..|++|+++++++ +.+.++ ++|.+++++.... ++..   ....+++|+++||
T Consensus       142 ~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~---~~~~~~~d~v~~~  215 (309)
T cd05289         142 LKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYTKG-DFER---AAAPGGVDAVLDT  215 (309)
T ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCCCC-chhh---ccCCCCceEEEEC
Confidence            99999999999999999999999999999999999777 778886 8998778877665 4443   2222379999999


Q ss_pred             CCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeee
Q 042426          158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV  237 (270)
Q Consensus       158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  237 (270)
                      +++.....++++++++|+++.+|....     ..  .   ..+.+++++........    .+.+.++.+++.++.+.+.
T Consensus       216 ~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~--~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  281 (309)
T cd05289         216 VGGETLARSLALVKPGGRLVSIAGPPP-----AE--Q---AAKRRGVRAGFVFVEPD----GEQLAELAELVEAGKLRPV  281 (309)
T ss_pred             CchHHHHHHHHHHhcCcEEEEEcCCCc-----ch--h---hhhhccceEEEEEeccc----HHHHHHHHHHHHCCCEEEe
Confidence            999888999999999999999987431     10  0   33445566555544221    5778899999999999887


Q ss_pred             eeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          238 EDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       238 ~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      +...|++++++++++.+.+++..+|+++
T Consensus       282 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         282 VDRVFPLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             eccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence            7788999999999999998887888874

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=1.8e-25  Score=181.65  Aligned_cols=207  Identities=30%  Similarity=0.400  Sum_probs=170.2

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec--------------------------ccceeeEeecCCccceeccCCCCCccc-
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL--------------------------TSWEEFSLIQSPQLLIKILDTSVPLPY-   56 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~--------------------------g~~~~~~~v~~~~~~~~~~p~~~~~~~-   56 (270)
                      .+++|+|.++|++++.|++||+|+++                          |++++|+.++++. ++++ |++  ++. 
T Consensus        35 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~--~~~~  110 (271)
T cd05188          35 HEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADN-LVPL-PDG--LSLE  110 (271)
T ss_pred             cccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCEeccccCCcceEEEEechHH-eEEC-CCC--CCHH
Confidence            35778999999999999999999873                          6899999999999 9999 988  555 


Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCc
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEE  136 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~  136 (270)
                      +++.++.++.+||+++.....++++++|+|+|+++ +|++++++++..|.+|+++++++++.+.++ ++|.++++++.+.
T Consensus       111 ~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~  188 (271)
T cd05188         111 EAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE  188 (271)
T ss_pred             HhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceeccCCcC
Confidence            48888899999999998888779999999999866 999999999999999999999999999997 8898888887776


Q ss_pred             hhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc
Q 042426          137 PDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF  214 (270)
Q Consensus       137 ~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (270)
                       ++.+.+. ...+ ++|+++|+++. .....++++++++|+++.++.....     .........+.+++++.++.... 
T Consensus       189 -~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-  260 (271)
T cd05188         189 -DLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGG-----PPLDDLRRLLFKELTIIGSTGGT-  260 (271)
T ss_pred             -CHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCC-----CCcccHHHHHhcceEEEEeecCC-
Confidence             6666665 4444 89999999998 7889999999999999999875532     11122445677889998887654 


Q ss_pred             ccchHHHHHHHHHH
Q 042426          215 YHQYPKFLELVMLA  228 (270)
Q Consensus       215 ~~~~~~~~~~~~~~  228 (270)
                          .+.+++++++
T Consensus       261 ----~~~~~~~~~~  270 (271)
T cd05188         261 ----REDFEEALDL  270 (271)
T ss_pred             ----HHHHHHHHhh
Confidence                2345555443

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.83  E-value=2.4e-19  Score=129.56  Aligned_cols=127  Identities=28%  Similarity=0.471  Sum_probs=114.2

Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC-cchHHHHHHc
Q 042426           92 AVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG-GKMLDAVLLN  169 (270)
Q Consensus        92 ~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g-~~~~~~~~~~  169 (270)
                      ++|++++|+|+.+|++|+++++++++++.++ ++|+++++++++. ++.+++++.+++ ++|++|||+| ...++.++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~   78 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL   78 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence            6899999999999999999999999999999 9999999999998 899999999998 9999999999 5799999999


Q ss_pred             cccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHH
Q 042426          170 MRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIK  230 (270)
Q Consensus       170 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (270)
                      ++++|+++.+|...     ......+...++.+++++.+++..+     ++.++++++++.
T Consensus        79 l~~~G~~v~vg~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la  129 (130)
T PF00107_consen   79 LRPGGRIVVVGVYG-----GDPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA  129 (130)
T ss_dssp             EEEEEEEEEESSTS-----TSEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred             hccCCEEEEEEccC-----CCCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence            99999999999965     2445678889999999999999876     566777777664

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.67  E-value=1e-16  Score=115.34  Aligned_cols=122  Identities=25%  Similarity=0.288  Sum_probs=81.4

Q ss_pred             hCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC--cch-HHHHHHccccCCEEEEEcccccccccCCCCccchHHHHh
Q 042426          125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG--GKM-LDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVG  201 (270)
Q Consensus       125 ~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g--~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  201 (270)
                      +|+++++||++. ++      ..++++|+|||++|  ++. +..++++| ++|+++.++. .          ........
T Consensus         1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~----------~~~~~~~~   61 (127)
T PF13602_consen    1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-D----------LPSFARRL   61 (127)
T ss_dssp             CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-H----------HHHHHHHH
T ss_pred             CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-c----------ccchhhhh
Confidence            589999999976 66      33448999999999  543 37777888 9999999864 0          11111112


Q ss_pred             hcceeeeccccCcc--cchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          202 KRICMEGFLAGDFY--HQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       202 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                      +...+.........  ....+.++++.+++++|+++|.+.++||++++++|++.+++++..||+||
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   62 KGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             cccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            22333333222110  12456799999999999999999999999999999999999999999996

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.45  E-value=3e-12  Score=108.16  Aligned_cols=175  Identities=12%  Similarity=0.099  Sum_probs=128.4

Q ss_pred             HHHHhhhhcC-CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhH
Q 042426           68 AYGGLHELCS-PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        68 a~~~l~~~~~-~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~  146 (270)
                      .|..+.+..+ .-+|++|+|.|+ |.+|+.+++.++.+|++|+++..++.+.+.++ ++|++. ++      ..+.+   
T Consensus       188 ~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~-~~------~~e~v---  255 (413)
T cd00401         188 LIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEV-MT------MEEAV---  255 (413)
T ss_pred             hHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEE-cc------HHHHH---
Confidence            3444434333 357999999997 99999999999999999999999999999888 888842 21      22222   


Q ss_pred             cCCCccEEEeCCCcc-hHHHH-HHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHH-
Q 042426          147 FPEGIDIYFENVGGK-MLDAV-LLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLE-  223 (270)
Q Consensus       147 ~~~~~d~v~d~~g~~-~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  223 (270)
                        .++|+||+|+|.. .+... +..++++|+++.+|..        ...++...+..+++++.+......    ...++ 
T Consensus       256 --~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~~~  321 (413)
T cd00401         256 --KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYELPD  321 (413)
T ss_pred             --cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEcCC
Confidence              2489999999975 56655 9999999999999862        123667777778888887766431    11234 


Q ss_pred             -HHHHHHHCCce---eeeeeee-----cCcc-cHHHHHHHHhcCCc-cceEEEEec
Q 042426          224 -LVMLAIKEGKL---VYVEDIA-----EGLE-KAPSALVGIFTGQN-VGKQLVAVA  268 (270)
Q Consensus       224 -~~~~~~~~g~~---~~~~~~~-----~~~~-~~~~a~~~~~~~~~-~gk~vv~~~  268 (270)
                       +.+.++.+|++   .+.+...     ++|+ ++.++++.+.++.. ..|+++.+.
T Consensus       322 g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         322 GRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             cchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence             68899999988   3334444     6788 99999999988653 357776553

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.43  E-value=5.8e-12  Score=109.03  Aligned_cols=149  Identities=14%  Similarity=0.060  Sum_probs=107.1

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eecCCc------------hhHHHHHH
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-FNYKEE------------PDLDAALN  144 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~------------~~~~~~i~  144 (270)
                      ..++++|+|+|+ |.+|+++++.|+.+|++|++++.++++++.++ ++|++.+ ++..+.            .++.+...
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            457899999998 99999999999999999999999999999998 8999843 554331            02323333


Q ss_pred             hH-cC--CCccEEEeCCCcc------h-HHHHHHccccCCEEEEEcccccccccCCCCccchHHHHh-hcceeeeccccC
Q 042426          145 RC-FP--EGIDIYFENVGGK------M-LDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVG-KRICMEGFLAGD  213 (270)
Q Consensus       145 ~~-~~--~~~d~v~d~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  213 (270)
                      +. .+  +++|++|+|++.+      . .+.+++.++++|+++.++...+.+.+.   ..+...++. +++++.|.+...
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~---t~~~~~v~~~~gVti~Gv~n~P  316 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCEL---TVPGEVVVTDNGVTIIGYTDLP  316 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCccc---ccCccceEeECCEEEEEeCCCc
Confidence            32 22  2699999999963      3 499999999999999998853221111   122234454 788888876322


Q ss_pred             cccchHHHHHHHHHHHHCCceee
Q 042426          214 FYHQYPKFLELVMLAIKEGKLVY  236 (270)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~g~~~~  236 (270)
                           .++..+..+++.++.+..
T Consensus       317 -----~~~p~~As~lla~~~i~l  334 (509)
T PRK09424        317 -----SRLPTQSSQLYGTNLVNL  334 (509)
T ss_pred             -----hhHHHHHHHHHHhCCccH
Confidence                 344556888888887754

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.83  E-value=5.4e-07  Score=73.19  Aligned_cols=236  Identities=16%  Similarity=0.165  Sum_probs=134.2

Q ss_pred             CcccceEEEEeecCCCCCCCCCEEEec---cc---------------------------ceeeEeecCCccceeccCCCC
Q 042426            3 PLSGYGVSKVLDSTHPNYKKDDLVWGL---TS---------------------------WEEFSLIQSPQLLIKILDTSV   52 (270)
Q Consensus         3 ~i~g~g~v~~vG~~v~~~~~Gd~V~~~---g~---------------------------~~~~~~v~~~~~~~~~~p~~~   52 (270)
                      .||..|....+.|+++++.+|.||+|+   ++                           |-+|.++..+. .+.  |+. 
T Consensus        32 ~vPvWGfA~VveS~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~-~y~--~~~-  107 (314)
T PF11017_consen   32 IVPVWGFATVVESRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADP-AYD--PER-  107 (314)
T ss_pred             ccccceEEEEEeeCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCc-ccC--cch-
Confidence            377788888899999999999999998   22                           22232222222 111  111 


Q ss_pred             CccccccccCchhhhHHHHhhhhc--CCCCCcEEEEecCCchHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHHHhCC-
Q 042426           53 PLPYYTGILGMPGLTAYGGLHELC--SPKKGEYVYVSAASGAVGQLVGQFVK--LVGCYVVGSARSKEKVDLLKHKFGF-  127 (270)
Q Consensus        53 ~~~~~~a~l~~~~~ta~~~l~~~~--~~~~g~~vlI~ga~g~vG~~ai~la~--~~g~~v~~~~~~~~~~~~~~~~~g~-  127 (270)
                        ....+.+--.+.|+|.+-..+.  ..-..+.|+|.+|++-+++.++.+++  .-+.+++.++ |..+..+.+ .+|. 
T Consensus       108 --e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve-~lg~Y  183 (314)
T PF11017_consen  108 --EDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVE-SLGCY  183 (314)
T ss_pred             --hHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhh-ccCCc
Confidence              1012333334556664422211  12234689999999999999999888  3345999999 778888888 8887 


Q ss_pred             CceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCC-EEEEEcccccccccC-------CCCccchHH
Q 042426          128 DDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICG-HIAVCGMISQYNIEK-------PEGVHNLMQ  198 (270)
Q Consensus       128 ~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G-~~v~~g~~~~~~~~~-------~~~~~~~~~  198 (270)
                      +.|+.|.+       |.++.....-+++|+.|+. .....-..+...= ..+.+|..+......       ....++...
T Consensus       184 d~V~~Yd~-------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FFAp~  256 (314)
T PF11017_consen  184 DEVLTYDD-------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFFAPD  256 (314)
T ss_pred             eEEeehhh-------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEeChH
Confidence            67877754       3333333467999999985 4445555555542 455666655432211       111122222


Q ss_pred             HHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee-eeeeecCcccHHHHHHHHhcCCc
Q 042426          199 VVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY-VEDIAEGLEKAPSALVGIFTGQN  259 (270)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~a~~~~~~~~~  259 (270)
                      ...+.+.-.|...  +.....+.+.++.+..    ..- .+...-+.+.++++++.+.+++.
T Consensus       257 ~~~kr~~~~G~~~--~~~r~~~aw~~f~~~~----~~wl~~~~~~G~ea~~~~y~~l~~G~v  312 (314)
T PF11017_consen  257 QIDKRIKEWGAAE--FFQRMAAAWKRFAADA----QPWLKVEEVAGPEAVEAAYQDLLAGKV  312 (314)
T ss_pred             HHHHHHHHhCHHH--HHHHHHHHHHHHHHhh----cCcEEEEEecCHHHHHHHHHHHhcCCC
Confidence            2333322222211  1112223333333322    222 23345699999999999988763

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.69  E-value=2.3e-07  Score=80.55  Aligned_cols=103  Identities=19%  Similarity=0.218  Sum_probs=79.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCc------------hhHHHHHHhH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEE------------PDLDAALNRC  146 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~------------~~~~~~i~~~  146 (270)
                      ++++++|+|+ |.+|+++++.++.+|++|+++++++++.+.++ ++|++. .++..+.            .++.+...+.
T Consensus       163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            5689999998 99999999999999999999999999999998 799864 2332110            1333333333


Q ss_pred             cC---CCccEEEeCC---Cc--c--hHHHHHHccccCCEEEEEccccc
Q 042426          147 FP---EGIDIYFENV---GG--K--MLDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       147 ~~---~~~d~v~d~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      ..   .++|++|+|+   |.  +  ..+..++.+++++.++.++...+
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G  288 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG  288 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence            32   2699999999   54  2  57888999999999998877544

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.58  E-value=4.8e-07  Score=70.21  Aligned_cols=80  Identities=26%  Similarity=0.402  Sum_probs=65.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----CceeecCCchhHHHHHHhHcCC--CccEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF----DDAFNYKEEPDLDAALNRCFPE--GIDIY  154 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~i~~~~~~--~~d~v  154 (270)
                      +..++|+||++|+|.+.++.+...|++|+.+.|+.++++.+.++++.    ...+|-++..+....+......  .+|++
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiL   85 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDIL   85 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEE
Confidence            47899999999999999999999999999999999999999989993    2456766653555555544443  69999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      ++.+|-
T Consensus        86 vNNAGl   91 (246)
T COG4221          86 VNNAGL   91 (246)
T ss_pred             EecCCC
Confidence            999983

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.55  E-value=1.4e-06  Score=70.94  Aligned_cols=171  Identities=16%  Similarity=0.194  Sum_probs=100.9

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCC
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      .+.+++|++||.+|. |+ |..++++++..|.  +|++++.+++..+.+++.   .+...+ ..... ++.+ + ...++
T Consensus        72 ~~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d~~~-l-~~~~~  145 (272)
T PRK11873         72 LAELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-EIEA-L-PVADN  145 (272)
T ss_pred             hccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-chhh-C-CCCCC
Confidence            356889999999985 55 8888888887765  799999999988888732   333322 22212 2211 1 11123


Q ss_pred             CccEEEeCCC-----c--chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHH
Q 042426          150 GIDIYFENVG-----G--KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFL  222 (270)
Q Consensus       150 ~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (270)
                      .||+|+....     .  ..+..+.+.|+|+|+++..+....     ..  .+  ....+...+.+.......     ..
T Consensus       146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~-----~~--~~--~~~~~~~~~~~~~~~~~~-----~~  211 (272)
T PRK11873        146 SVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLR-----GE--LP--EEIRNDAELYAGCVAGAL-----QE  211 (272)
T ss_pred             ceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeecc-----CC--CC--HHHHHhHHHHhccccCCC-----CH
Confidence            7999985432     1  378999999999999998766432     11  11  112222222222111110     12


Q ss_pred             HHHHHHHHC-Cc--eeeeeeeecCcccHHHHHHHH--hcCCccceEEE
Q 042426          223 ELVMLAIKE-GK--LVYVEDIAEGLEKAPSALVGI--FTGQNVGKQLV  265 (270)
Q Consensus       223 ~~~~~~~~~-g~--~~~~~~~~~~~~~~~~a~~~~--~~~~~~gk~vv  265 (270)
                      .++.+++.+ |.  +.......+++++..++++.+  .+++..++.+.
T Consensus       212 ~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  259 (272)
T PRK11873        212 EEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIV  259 (272)
T ss_pred             HHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEE
Confidence            344455554 32  233344567889999999988  55554555544

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.47  E-value=5.1e-06  Score=70.39  Aligned_cols=99  Identities=16%  Similarity=0.206  Sum_probs=72.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC--
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV--  158 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~--  158 (270)
                      +.+++|+|+ |.+|+.+++.++.+|++|+++.+++++.+.+.+.++......+.+..++.+.+.     .+|++++|+  
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~-----~aDvVI~a~~~  240 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVK-----RADLLIGAVLI  240 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHc-----cCCEEEEcccc
Confidence            346999997 999999999999999999999999888887764666532222222213333332     489999998  


Q ss_pred             -Cc--c--hHHHHHHccccCCEEEEEcccccc
Q 042426          159 -GG--K--MLDAVLLNMRICGHIAVCGMISQY  185 (270)
Q Consensus       159 -g~--~--~~~~~~~~l~~~G~~v~~g~~~~~  185 (270)
                       +.  +  .....++.+++++.++.++...+.
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG  272 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGG  272 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCC
Confidence             32  2  247788889999999998875443

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.45  E-value=4.1e-06  Score=71.53  Aligned_cols=103  Identities=19%  Similarity=0.228  Sum_probs=77.4

Q ss_pred             hHHHHhhhhcCCC-CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHh
Q 042426           67 TAYGGLHELCSPK-KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNR  145 (270)
Q Consensus        67 ta~~~l~~~~~~~-~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~  145 (270)
                      ..|.++.+..++. .|++++|.|. |.+|+.+++.++.+|++|+++.+++.+...+. ..|+. +.      ++.+.+. 
T Consensus       197 s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal~-  266 (425)
T PRK05476        197 SLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAAE-  266 (425)
T ss_pred             hhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHHh-
Confidence            3455554443444 7999999997 99999999999999999999998887766665 55654 22      2222222 


Q ss_pred             HcCCCccEEEeCCCcc-hHH-HHHHccccCCEEEEEcccc
Q 042426          146 CFPEGIDIYFENVGGK-MLD-AVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       146 ~~~~~~d~v~d~~g~~-~~~-~~~~~l~~~G~~v~~g~~~  183 (270)
                          ++|++++++|.. .+. ..+..+++++.++.+|..+
T Consensus       267 ----~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        267 ----LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             ----CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence                489999999975 454 6888999999999998754

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=98.42  E-value=2.6e-07  Score=64.24  Aligned_cols=42  Identities=19%  Similarity=0.359  Sum_probs=33.5

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceec
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKI   47 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~   47 (270)
                      +++|+|.++|+++++|++||+|+..                              |+|+||+++++++ ++|+
T Consensus        38 E~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~v  109 (109)
T PF08240_consen   38 EGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEVLGLGLDGGFAEYVVVPARN-LVPV  109 (109)
T ss_dssp             EEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEETTTSSTCSSBSEEEEEGGG-EEEE
T ss_pred             ceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCEeEcCCCCcccCeEEEehHH-EEEC
Confidence            4566777789999999999999652                              7889999998888 8764

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.39  E-value=2.8e-06  Score=63.99  Aligned_cols=78  Identities=15%  Similarity=0.323  Sum_probs=60.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeecCCch---hHHHHHHhHcCCCccEEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--DDAFNYKEEP---DLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~---~~~~~i~~~~~~~~d~v~  155 (270)
                      |.+|||+||++|+|+..++-...+|-+|++..|++++++.++.....  ..+.|..+.+   .+.+.+.+..+ ..++++
T Consensus         5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvli   83 (245)
T COG3967           5 GNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVLI   83 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chheee
Confidence            67999999999999999999999999999999999999999844432  2344554431   25555555544 478999


Q ss_pred             eCCC
Q 042426          156 ENVG  159 (270)
Q Consensus       156 d~~g  159 (270)
                      +++|
T Consensus        84 NNAG   87 (245)
T COG3967          84 NNAG   87 (245)
T ss_pred             eccc
Confidence            9988

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.36  E-value=9.6e-06  Score=68.89  Aligned_cols=92  Identities=20%  Similarity=0.211  Sum_probs=71.8

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      ..+|++|+|.|. |.+|+.+++.++.+|++|+++..++.+...+. ..|+. +.      +..+.+.     +.|++|++
T Consensus       192 ~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~------~leeal~-----~aDVVIta  257 (406)
T TIGR00936       192 LIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFR-VM------TMEEAAK-----IGDIFITA  257 (406)
T ss_pred             CCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCE-eC------CHHHHHh-----cCCEEEEC
Confidence            367999999997 99999999999999999999988887766666 66763 22      2222232     37999999


Q ss_pred             CCcc-hHH-HHHHccccCCEEEEEcccc
Q 042426          158 VGGK-MLD-AVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       158 ~g~~-~~~-~~~~~l~~~G~~v~~g~~~  183 (270)
                      +|.. .+. ..+..+++++.++.+|..+
T Consensus       258 TG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       258 TGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             CCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence            9985 454 4888999999999988743

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.36  E-value=3.9e-06  Score=66.91  Aligned_cols=82  Identities=18%  Similarity=0.248  Sum_probs=61.6

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-------ceeecCCchhHHHHHHhHcC-C-
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-------DAFNYKEEPDLDAALNRCFP-E-  149 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-------~vi~~~~~~~~~~~i~~~~~-~-  149 (270)
                      ..+.+++|+|||+|+|...+..+...|.+++.+.|+.++++.+.+++.-.       ..+|..+.++......+... + 
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            45679999999999999999999999999999999999998887666532       23466665233332322222 2 


Q ss_pred             CccEEEeCCCc
Q 042426          150 GIDIYFENVGG  160 (270)
Q Consensus       150 ~~d~v~d~~g~  160 (270)
                      .+|+.++++|-
T Consensus        84 ~IdvLVNNAG~   94 (265)
T COG0300          84 PIDVLVNNAGF   94 (265)
T ss_pred             cccEEEECCCc
Confidence            69999999983

>PLN02494 adenosylhomocysteinase

Probab=98.35  E-value=8.5e-06  Score=69.94  Aligned_cols=100  Identities=17%  Similarity=0.225  Sum_probs=75.8

Q ss_pred             HHHhhhhcCC-CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHc
Q 042426           69 YGGLHELCSP-KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        69 ~~~l~~~~~~-~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      +.++.+..++ -.|++++|.|. |.+|+.+++.++.+|++|+++.+++.+...+. ..|.. ++      +..+.+.   
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~-vv------~leEal~---  308 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQ-VL------TLEDVVS---  308 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCe-ec------cHHHHHh---
Confidence            3344333333 56899999997 99999999999999999999998877665665 56664 22      2233333   


Q ss_pred             CCCccEEEeCCCcc-h-HHHHHHccccCCEEEEEccc
Q 042426          148 PEGIDIYFENVGGK-M-LDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       148 ~~~~d~v~d~~g~~-~-~~~~~~~l~~~G~~v~~g~~  182 (270)
                        ..|+++++.|.. . ....++.|++++.++.+|..
T Consensus       309 --~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        309 --EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             --hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence              289999999975 3 48899999999999999874

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.32  E-value=2.4e-05  Score=64.33  Aligned_cols=93  Identities=23%  Similarity=0.327  Sum_probs=72.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .+.+++|+|. |.+|+.+++.++.+|++|++..+++++.+.++ ++|... +.+  . ++.+.+.     ++|+||+|++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~-~~~--~-~l~~~l~-----~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSP-FHL--S-ELAEEVG-----KIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCee-ecH--H-HHHHHhC-----CCCEEEECCC
Confidence            5789999997 99999999999999999999999988888777 777642 221  1 3333332     3999999987


Q ss_pred             cc-hHHHHHHccccCCEEEEEcccc
Q 042426          160 GK-MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       160 ~~-~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      .. .....++.+++++.++.++..+
T Consensus       220 ~~~i~~~~l~~~~~g~vIIDla~~p  244 (296)
T PRK08306        220 ALVLTKEVLSKMPPEALIIDLASKP  244 (296)
T ss_pred             hhhhhHHHHHcCCCCcEEEEEccCC
Confidence            65 3456778899999999887744

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.25  E-value=1.9e-05  Score=62.87  Aligned_cols=104  Identities=20%  Similarity=0.225  Sum_probs=70.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---Cce--eecCCchhHHHHHHhHc--CCCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF---DDA--FNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v--i~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      .+.+++|+|++|++|..+++.+...|++|+++++++++.+.+.++...   .+.  .|..+.....+.+.+..  .+++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            357999999999999999999999999999999998887766434322   111  24444323333332221  13589


Q ss_pred             EEEeCCCcc------------------------hHHHHHHccccCCEEEEEcccc
Q 042426          153 IYFENVGGK------------------------MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       153 ~v~d~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      .++.+.+..                        .++..+.+++++|+++.++...
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            999988731                        1344555667788999887653

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.24  E-value=2.4e-05  Score=62.80  Aligned_cols=143  Identities=17%  Similarity=0.261  Sum_probs=93.0

Q ss_pred             CCCCCCCCEEEecccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHH
Q 042426           17 HPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQL   96 (270)
Q Consensus        17 v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~   96 (270)
                      .+.+++||+++...+|.+|.. +... ++++ +++  +++..+..+.... ....+..  .+.++.+||-.|. | .|..
T Consensus        64 ~~p~~~g~~~~i~p~~~~~~~-~~~~-~i~i-~p~--~afgtg~h~tt~~-~l~~l~~--~~~~~~~VLDiGc-G-sG~l  133 (250)
T PRK00517         64 FHPIRIGDRLWIVPSWEDPPD-PDEI-NIEL-DPG--MAFGTGTHPTTRL-CLEALEK--LVLPGKTVLDVGC-G-SGIL  133 (250)
T ss_pred             CCCEEEcCCEEEECCCcCCCC-CCeE-EEEE-CCC--CccCCCCCHHHHH-HHHHHHh--hcCCCCEEEEeCC-c-HHHH
Confidence            556789999988888988855 6677 8888 666  5554333332222 1222221  2567899999984 4 4877


Q ss_pred             HHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCce---eecCCchhHHHHHHhHcCCCccEEEeCCCcc----hHHHHHH
Q 042426           97 VGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDA---FNYKEEPDLDAALNRCFPEGIDIYFENVGGK----MLDAVLL  168 (270)
Q Consensus        97 ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v---i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~----~~~~~~~  168 (270)
                      ++.+++ .|+ +|++++.++...+.+++......+   +..... +          ..||+|+......    .+..+.+
T Consensus       134 ~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~-~----------~~fD~Vvani~~~~~~~l~~~~~~  201 (250)
T PRK00517        134 AIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQG-D----------LKADVIVANILANPLLELAPDLAR  201 (250)
T ss_pred             HHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccC-C----------CCcCEEEEcCcHHHHHHHHHHHHH
Confidence            776555 566 699999999888877733322111   111110 0          0499998766543    5677888


Q ss_pred             ccccCCEEEEEcc
Q 042426          169 NMRICGHIAVCGM  181 (270)
Q Consensus       169 ~l~~~G~~v~~g~  181 (270)
                      .|+++|+++..|.
T Consensus       202 ~LkpgG~lilsgi  214 (250)
T PRK00517        202 LLKPGGRLILSGI  214 (250)
T ss_pred             hcCCCcEEEEEEC
Confidence            9999999998765

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.18  E-value=5.3e-05  Score=61.83  Aligned_cols=79  Identities=19%  Similarity=0.331  Sum_probs=58.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHh---HcCCCccEEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNR---CFPEGIDIYF  155 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~---~~~~~~d~v~  155 (270)
                      .+.+++|+||+|++|..+++.+...|++|+++++++++.+.+. ..+... ..|..+..++...+.+   ...+.+|+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            3568999999999999999999889999999999988888776 445432 2455554233333333   2334789999


Q ss_pred             eCCC
Q 042426          156 ENVG  159 (270)
Q Consensus       156 d~~g  159 (270)
                      +++|
T Consensus        82 ~~Ag   85 (277)
T PRK05993         82 NNGA   85 (277)
T ss_pred             ECCC
Confidence            9986

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.17  E-value=1.8e-05  Score=57.20  Aligned_cols=93  Identities=24%  Similarity=0.314  Sum_probs=64.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      ++.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++..  ..+++.   ++.+.+.+     +|++++
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~---~~~~~~~~-----~DivI~   81 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE---DLEEALQE-----ADIVIN   81 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG---GHCHHHHT-----ESEEEE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH---HHHHHHhh-----CCeEEE
Confidence            4689999998 9999999999999999 5999999999988888677432  233443   33333333     999999


Q ss_pred             CCCcch---HHHHHHccccC-CEEEEEcc
Q 042426          157 NVGGKM---LDAVLLNMRIC-GHIAVCGM  181 (270)
Q Consensus       157 ~~g~~~---~~~~~~~l~~~-G~~v~~g~  181 (270)
                      |++...   ....+....+. +.++.++.
T Consensus        82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~  110 (135)
T PF01488_consen   82 ATPSGMPIITEEMLKKASKKLRLVIDLAV  110 (135)
T ss_dssp             -SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred             ecCCCCcccCHHHHHHHHhhhhceecccc
Confidence            998642   23333333322 56777765

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK12742 oxidoreductase; Provisional

Probab=98.16  E-value=4.9e-05  Score=60.38  Aligned_cols=101  Identities=19%  Similarity=0.199  Sum_probs=67.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +.+++|+|++|++|..+++.+...|++|+.+.+ ++++.+.+.++.+... ..|..+...+.+.+.+.  +++|++++++
T Consensus         6 ~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~a   83 (237)
T PRK12742          6 GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVNA   83 (237)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEECC
Confidence            578999999999999999999999999988765 4555555543556542 23444432333444332  3589999998


Q ss_pred             Ccc----h----------------------HHHHHHccccCCEEEEEcccc
Q 042426          159 GGK----M----------------------LDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       159 g~~----~----------------------~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      |..    .                      ....+..++.+|+++.++...
T Consensus        84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~  134 (237)
T PRK12742         84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN  134 (237)
T ss_pred             CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence            741    0                      123334456678999887644

>PRK08324 short chain dehydrogenase; Validated

Probab=98.16  E-value=2.4e-05  Score=71.96  Aligned_cols=105  Identities=21%  Similarity=0.280  Sum_probs=73.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--D---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +|.+++|+||+|++|+.+++.+...|++|++++++.++.+.+.++++.  .   ...|..+..+..+.+.+..  .+++|
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD  500 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD  500 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999998887766645543  1   2235555423333333322  23699


Q ss_pred             EEEeCCCcc--------------------------hHHHHHHcccc---CCEEEEEccccc
Q 042426          153 IYFENVGGK--------------------------MLDAVLLNMRI---CGHIAVCGMISQ  184 (270)
Q Consensus       153 ~v~d~~g~~--------------------------~~~~~~~~l~~---~G~~v~~g~~~~  184 (270)
                      ++|+++|..                          .++.+++.+++   +|+++.+++...
T Consensus       501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~  561 (681)
T PRK08324        501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNA  561 (681)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Confidence            999999821                          13344555555   589998887543

>PRK06182 short chain dehydrogenase; Validated

Probab=98.14  E-value=4.6e-05  Score=62.05  Aligned_cols=79  Identities=24%  Similarity=0.390  Sum_probs=58.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d~  157 (270)
                      +.+++|+|++|++|..+++.+...|++|+++++++++.+.+. ..+.. ...|..+.+++.+.+.+..  .+++|+++++
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~   81 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN   81 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            568999999999999999999889999999999988877665 44443 2346655534444444332  2379999999


Q ss_pred             CCc
Q 042426          158 VGG  160 (270)
Q Consensus       158 ~g~  160 (270)
                      +|.
T Consensus        82 ag~   84 (273)
T PRK06182         82 AGY   84 (273)
T ss_pred             CCc
Confidence            983

>PRK05693 short chain dehydrogenase; Provisional

Probab=98.14  E-value=4.8e-05  Score=61.99  Aligned_cols=77  Identities=23%  Similarity=0.390  Sum_probs=57.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHc--CCCccEEEeCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCF--PEGIDIYFENV  158 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~--~~~~d~v~d~~  158 (270)
                      .+++|+||+|++|..+++.+...|++|++++++.++.+.+. ..+... ..|..+.+++.+.+.+..  .+++|+++++.
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            36999999999999999999989999999999988877766 445432 246665534444444332  23699999999


Q ss_pred             C
Q 042426          159 G  159 (270)
Q Consensus       159 g  159 (270)
                      |
T Consensus        81 g   81 (274)
T PRK05693         81 G   81 (274)
T ss_pred             C
Confidence            8

>PRK08265 short chain dehydrogenase; Provisional

Probab=98.12  E-value=5.9e-05  Score=60.98  Aligned_cols=81  Identities=14%  Similarity=0.161  Sum_probs=57.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      .+.+++|+|+++++|..+++.+...|++|++++++.++.+.+.++++..   ...|..+.+++.+.+.+..  .+.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3578999999999999999999889999999999988776665465532   1235555433444333322  1368999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      +.+.|.
T Consensus        85 v~~ag~   90 (261)
T PRK08265         85 VNLACT   90 (261)
T ss_pred             EECCCC
Confidence            999873

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.10  E-value=3.8e-05  Score=63.69  Aligned_cols=107  Identities=22%  Similarity=0.257  Sum_probs=72.2

Q ss_pred             ceeccCCCCCccccccccCchhhhHHHHhhhhcCC---CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 042426           44 LIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSP---KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVD  119 (270)
Q Consensus        44 ~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~---~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~  119 (270)
                      .+++ |+.  ...+.+....+..+++.++......   .++.+|+|+|+ |.+|..+++.++..|+ +|+++.+++++.+
T Consensus       141 a~~~-~k~--vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~  216 (311)
T cd05213         141 AIKV-GKR--VRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAE  216 (311)
T ss_pred             HHHH-HHH--HhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            6666 666  4434444444556666665332211   36899999997 9999999999988776 8999999988765


Q ss_pred             HHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcchH
Q 042426          120 LLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKML  163 (270)
Q Consensus       120 ~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~  163 (270)
                      .+.+++|.. +++..   ++.+.+.     .+|+||.|++.+..
T Consensus       217 ~la~~~g~~-~~~~~---~~~~~l~-----~aDvVi~at~~~~~  251 (311)
T cd05213         217 ELAKELGGN-AVPLD---ELLELLN-----EADVVISATGAPHY  251 (311)
T ss_pred             HHHHHcCCe-EEeHH---HHHHHHh-----cCCEEEECCCCCch
Confidence            555488873 33321   3333333     38999999998644

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.04  E-value=0.00029  Score=56.86  Aligned_cols=106  Identities=21%  Similarity=0.324  Sum_probs=73.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc-e----eecCCchhHHHHHHhHc--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDD-A----FNYKEEPDLDAALNRCF--PE  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-v----i~~~~~~~~~~~i~~~~--~~  149 (270)
                      .+..|+|+|||+|+|.+.+.-....|++++.+.+..++++.+.++   .+... +    .|-.+.++..+.+.+..  -|
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            367899999999999998888888899999999888877777323   33322 2    34455434444443322  24


Q ss_pred             CccEEEeCCCcc--------------------------hHHHHHHccccC--CEEEEEcccccc
Q 042426          150 GIDIYFENVGGK--------------------------MLDAVLLNMRIC--GHIAVCGMISQY  185 (270)
Q Consensus       150 ~~d~v~d~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~~  185 (270)
                      ++|+.++.+|-.                          ....++..|++.  |++|.+++..+.
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~  154 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK  154 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence            799999998831                          135567777654  999999886653

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=98.00  E-value=4.6e-05  Score=53.03  Aligned_cols=94  Identities=19%  Similarity=0.300  Sum_probs=66.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCCccEEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVK-LVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~-~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      |+.+||-.|  +|.|..++.+++ ..+++|+++..+++-.+.+++..   +...-+..... ++  .......++||+|+
T Consensus         1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~--~~~~~~~~~~D~v~   75 (112)
T PF12847_consen    1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA--EFDPDFLEPFDLVI   75 (112)
T ss_dssp             TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC--HGGTTTSSCEEEEE
T ss_pred             CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc--ccCcccCCCCCEEE
Confidence            578999998  677999999998 57889999999999888888655   33222222222 33  11112223699999


Q ss_pred             eCC-Cc----c------hHHHHHHccccCCEEEE
Q 042426          156 ENV-GG----K------MLDAVLLNMRICGHIAV  178 (270)
Q Consensus       156 d~~-g~----~------~~~~~~~~l~~~G~~v~  178 (270)
                      ... ..    .      .++...+.|+|+|+++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi  109 (112)
T PF12847_consen   76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI  109 (112)
T ss_dssp             ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence            877 22    1      27888999999999875

...

>PRK05872 short chain dehydrogenase; Provisional

Probab=98.00  E-value=6.1e-05  Score=62.12  Aligned_cols=81  Identities=20%  Similarity=0.266  Sum_probs=59.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ce--eecCCchhHHHHHHhHcC--CCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DA--FNYKEEPDLDAALNRCFP--EGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~v--i~~~~~~~~~~~i~~~~~--~~~d  152 (270)
                      .+.+++|+|++|++|..+++.+...|++|++++++.++.+.+.++++..   ..  .|..+.++..+.+.+...  +++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999999999999999999999988877766566531   11  455554233333333221  3689


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      ++++++|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999984

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.99  E-value=0.00017  Score=58.34  Aligned_cols=81  Identities=22%  Similarity=0.357  Sum_probs=56.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC---ceeecCCchhHHHHHHhHc-CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD---DAFNYKEEPDLDAALNRCF-PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~-~~~~  151 (270)
                      .+.+++|+|+++++|.++++.+...|++|++++++.++.+.+.+++    +..   ...|..+..+..+.+.+.. .+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            3678999999999999999999999999999999888776655333    221   2235555423333333321 2468


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus        87 D~lv~nag~   95 (263)
T PRK08339         87 DIFFFSTGG   95 (263)
T ss_pred             cEEEECCCC
Confidence            999999873

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.99  E-value=0.00014  Score=61.02  Aligned_cols=81  Identities=23%  Similarity=0.230  Sum_probs=56.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++   .|..   ...|..+..+..+.+.+..  -+++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            356899999999999999999988999999999998876655433   3432   1235555423333333221  1369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus        87 D~lInnAg~   95 (334)
T PRK07109         87 DTWVNNAMV   95 (334)
T ss_pred             CEEEECCCc
Confidence            999999984

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.95  E-value=0.00013  Score=62.88  Aligned_cols=92  Identities=20%  Similarity=0.224  Sum_probs=71.0

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      .-.|.+++|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|+. +.      ++.+.+.     ..|+++.+
T Consensus       251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~-~~------~leell~-----~ADIVI~a  316 (476)
T PTZ00075        251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQ-VV------TLEDVVE-----TADIFVTA  316 (476)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCce-ec------cHHHHHh-----cCCEEEEC
Confidence            446899999997 99999999999999999999987766654554 44653 21      3333333     38999999


Q ss_pred             CCcc-hH-HHHHHccccCCEEEEEcccc
Q 042426          158 VGGK-ML-DAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       158 ~g~~-~~-~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +|.. .+ ...+..|++++.++.+|...
T Consensus       317 tGt~~iI~~e~~~~MKpGAiLINvGr~d  344 (476)
T PTZ00075        317 TGNKDIITLEHMRRMKNNAIVGNIGHFD  344 (476)
T ss_pred             CCcccccCHHHHhccCCCcEEEEcCCCc
Confidence            9875 44 48999999999999998753

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.92  E-value=0.0001  Score=59.69  Aligned_cols=80  Identities=20%  Similarity=0.289  Sum_probs=57.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      ++.+++|+|+++++|..+++.+...|++|+++++++++.+.+.++++..   ...|..+..+....+.+..  .+.+|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            3678999999999999999999999999999999988887776455432   1234444423333333321  2368999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++++|
T Consensus        85 i~~ag   89 (263)
T PRK06200         85 VGNAG   89 (263)
T ss_pred             EECCC
Confidence            99987

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.92  E-value=0.0001  Score=59.29  Aligned_cols=81  Identities=17%  Similarity=0.197  Sum_probs=57.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d  156 (270)
                      +|.+++|+||+|++|..+++.+...|++|+++++++.+.+...++++.. ...|..+.+++.+.+.+..  .+++|.++.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4679999999999999999999999999999999887776665455442 2345555423333333321  136899999


Q ss_pred             CCCc
Q 042426          157 NVGG  160 (270)
Q Consensus       157 ~~g~  160 (270)
                      ++|.
T Consensus        86 ~ag~   89 (255)
T PRK06057         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            8873

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.91  E-value=0.00052  Score=52.09  Aligned_cols=89  Identities=24%  Similarity=0.312  Sum_probs=65.8

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      -.|.+|.|+|. |.+|+.++++++.+|++|++..++........ ..+..    +.   ++.+.+.+     .|+|+.+.
T Consensus        34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~~----~~---~l~ell~~-----aDiv~~~~   99 (178)
T PF02826_consen   34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGVE----YV---SLDELLAQ-----ADIVSLHL   99 (178)
T ss_dssp             STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTEE----ES---SHHHHHHH------SEEEE-S
T ss_pred             cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcc-cccce----ee---ehhhhcch-----hhhhhhhh
Confidence            35889999997 99999999999999999999998877666343 44431    21   45555555     89999888


Q ss_pred             Cc-c-----hHHHHHHccccCCEEEEEcc
Q 042426          159 GG-K-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       159 g~-~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .. +     .-...++.|+++..+|.++.
T Consensus       100 plt~~T~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen  100 PLTPETRGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             SSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred             ccccccceeeeeeeeeccccceEEEeccc
Confidence            63 2     34678889999999998866

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.89  E-value=0.00011  Score=59.87  Aligned_cols=80  Identities=15%  Similarity=0.219  Sum_probs=57.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CC-ceeecCCchhHHHHHHhHc--CCCccEEEe
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-FD-DAFNYKEEPDLDAALNRCF--PEGIDIYFE  156 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d  156 (270)
                      +.+++|+||+|++|..+++.+...|++|+++.+++++.+.+.+.++ .. ...|..+.+++.+.+.+..  .+++|++++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4689999999999999999888889999999999888776654555 22 2245555434433333322  136899999


Q ss_pred             CCCc
Q 042426          157 NVGG  160 (270)
Q Consensus       157 ~~g~  160 (270)
                      +.|.
T Consensus        85 ~ag~   88 (273)
T PRK07825         85 NAGV   88 (273)
T ss_pred             CCCc
Confidence            9873

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.89  E-value=0.00012  Score=61.24  Aligned_cols=80  Identities=24%  Similarity=0.404  Sum_probs=57.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeecCCchhHHHHHHhH--cCCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDD---AFNYKEEPDLDAALNRC--FPEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~i~~~--~~~~~  151 (270)
                      .+.+++|+||++++|.++++.+...|++|+++++++++.+.+.++   .|...   ..|..+.++..+.+.+.  ..+++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            457899999999999999999999999999999998887655433   34431   23555542333333222  12469


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        86 D~lVnnAG   93 (330)
T PRK06139         86 DVWVNNVG   93 (330)
T ss_pred             CEEEECCC
Confidence            99999998

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.89  E-value=0.00011  Score=55.92  Aligned_cols=92  Identities=20%  Similarity=0.237  Sum_probs=64.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCCCc--
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENVGG--  160 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~--  160 (270)
                      |+|.||+|.+|..+++.+...|.+|++++|++++.+.   ..+.+. ..|..+..++.+.+.     ++|.||.++|.  
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~-----~~d~vi~~~~~~~   72 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALK-----GADAVIHAAGPPP   72 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHT-----TSSEEEECCHSTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhh-----hcchhhhhhhhhc
Confidence            7899999999999999999999999999999887775   223331 234443312333332     49999999983  


Q ss_pred             ---chHHHHHHccccCC--EEEEEcccc
Q 042426          161 ---KMLDAVLLNMRICG--HIAVCGMIS  183 (270)
Q Consensus       161 ---~~~~~~~~~l~~~G--~~v~~g~~~  183 (270)
                         ......++.++..|  +++.++...
T Consensus        73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             ccccccccccccccccccccceeeeccc
Confidence               24556666665544  777776544

...

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.88  E-value=0.00018  Score=57.36  Aligned_cols=79  Identities=24%  Similarity=0.320  Sum_probs=57.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      ++.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+..+.. ...|..+..+..+.+..  .+++|++|++.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a   85 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA   85 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence            4578999999999999999999999999999999988777666455543 22455554222332322  23689999999


Q ss_pred             Cc
Q 042426          159 GG  160 (270)
Q Consensus       159 g~  160 (270)
                      |.
T Consensus        86 g~   87 (245)
T PRK07060         86 GI   87 (245)
T ss_pred             CC
Confidence            73

>PRK06484 short chain dehydrogenase; Validated

Probab=97.86  E-value=0.00027  Score=63.08  Aligned_cols=105  Identities=18%  Similarity=0.204  Sum_probs=73.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .+.++||+||++++|..+++.+...|++|+++.++.++.+.+.++.+..   ...|..+.++....+.+...  +.+|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999999999999999999999999999988887777566543   22455554234433433321  368999


Q ss_pred             EeCCCcc----h-----------------------HHHHHHccccCCEEEEEccccc
Q 042426          155 FENVGGK----M-----------------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       155 ~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      ++++|..    .                       .+.++..+..+|+++.+++...
T Consensus       348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~  404 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS  404 (520)
T ss_pred             EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            9988731    0                       2334455556799998887554

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.86  E-value=0.0011  Score=53.37  Aligned_cols=81  Identities=15%  Similarity=0.185  Sum_probs=54.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.+++|+|++|++|..+++.+...|++ |+++++++++.+...++   .+..   ...|..+..++.+.+.....  ++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4578999999999999999999999998 99999887665533322   2332   22355554233333333211  36


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|+++++.|.
T Consensus        85 id~li~~ag~   94 (260)
T PRK06198         85 LDALVNAAGL   94 (260)
T ss_pred             CCEEEECCCc
Confidence            9999999974

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.86  E-value=0.00013  Score=58.93  Aligned_cols=80  Identities=24%  Similarity=0.294  Sum_probs=56.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      ++.+++|+||+|++|..+++.+...|++|+++.++.++.+.+.+..+..   ...|..+..+..+.+.+...  +.+|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3678999999999999999999889999999999888777776333321   12344443233333333221  368999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      +++.|
T Consensus        84 i~~Ag   88 (262)
T TIGR03325        84 IPNAG   88 (262)
T ss_pred             EECCC
Confidence            99986

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.86  E-value=0.00013  Score=58.87  Aligned_cols=83  Identities=14%  Similarity=0.239  Sum_probs=57.4

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----ceeecCCchhHHHHHHhHc--CCCc
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD----DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .-++.++||+||+|++|..+++.+...|++|+++.++++..+.+.++..-.    ...|..+..+..+.+.+..  .+++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            346689999999999999999999999999999999887776665333221    2235555423333232221  1369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+|+.+.|.
T Consensus        88 d~vi~~ag~   96 (264)
T PRK12829         88 DVLVNNAGI   96 (264)
T ss_pred             CEEEECCCC
Confidence            999998874

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.85  E-value=0.00028  Score=62.44  Aligned_cols=105  Identities=13%  Similarity=0.235  Sum_probs=68.4

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--------CC------C-ceeecCCchhH
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF--------GF------D-DAFNYKEEPDL  139 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~--------g~------~-~vi~~~~~~~~  139 (270)
                      ..+.+.|.+++|+||+|++|..+++.+...|++|++++|+.++.+.+.+.+        |.      . ...|..+..+ 
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es-  152 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ-  152 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH-
Confidence            345668899999999999999999999889999999999988776543221        21      1 1124433312 


Q ss_pred             HHHHHhHcCCCccEEEeCCCcch----------------HHHHHHcccc--CCEEEEEccccc
Q 042426          140 DAALNRCFPEGIDIYFENVGGKM----------------LDAVLLNMRI--CGHIAVCGMISQ  184 (270)
Q Consensus       140 ~~~i~~~~~~~~d~v~d~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~~  184 (270)
                         +.+.. +++|+||+++|...                ....++.+..  .+++|.++....
T Consensus       153 ---I~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga  211 (576)
T PLN03209        153 ---IGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGT  211 (576)
T ss_pred             ---HHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchh
Confidence               22222 35899999987421                1223333333  268998887543

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.85  E-value=0.00036  Score=55.85  Aligned_cols=81  Identities=16%  Similarity=0.178  Sum_probs=55.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      ++.+++|+|++|++|+.++..+...|++|+++.+++++.+.+.+++   +..   ...|..+..+..+.+.+...  +++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999889999999998887666554332   222   12355544233333322211  369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+++.++|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999984

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.84  E-value=0.00034  Score=61.27  Aligned_cols=80  Identities=19%  Similarity=0.247  Sum_probs=54.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS--KEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~--~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      ++.+++|+|++|++|..+++.+...|++|+++.++  .++.+.+.++++.. ...|..+.++..+.+....  .+++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            46899999999999999999999999999998864  23444444355543 2346665523333333221  2368999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      |++.|
T Consensus       289 i~~AG  293 (450)
T PRK08261        289 VHNAG  293 (450)
T ss_pred             EECCC
Confidence            99998

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.82  E-value=0.00011  Score=63.52  Aligned_cols=88  Identities=25%  Similarity=0.340  Sum_probs=61.4

Q ss_pred             hhhhHHHHhhhhcC---CCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhH
Q 042426           64 PGLTAYGGLHELCS---PKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDL  139 (270)
Q Consensus        64 ~~~ta~~~l~~~~~---~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  139 (270)
                      +..+++.++.....   -.++.+|+|+|+ |.+|..+++.+...|+ +|+++.++.++.+.+.+++|.. +++.  . +.
T Consensus       162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~-~~  236 (423)
T PRK00045        162 AVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL--D-EL  236 (423)
T ss_pred             CcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--H-HH
Confidence            44555555532221   246789999997 9999999999999998 8999999988876555477753 3332  1 33


Q ss_pred             HHHHHhHcCCCccEEEeCCCcc
Q 042426          140 DAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus       140 ~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      .+.+.     ++|+||+|++.+
T Consensus       237 ~~~l~-----~aDvVI~aT~s~  253 (423)
T PRK00045        237 PEALA-----EADIVISSTGAP  253 (423)
T ss_pred             HHHhc-----cCCEEEECCCCC
Confidence            33332     489999999874

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.82  E-value=0.00052  Score=56.15  Aligned_cols=92  Identities=21%  Similarity=0.276  Sum_probs=68.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+++|+|. |.+|.++++.++.+|++|++..+++++.+.+. +.|.. .+.+  . ++.+.+.     ++|+|++++.
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~-~~~~--~-~l~~~l~-----~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLI-PFPL--N-KLEEKVA-----EIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-eecH--H-HHHHHhc-----cCCEEEECCC
Confidence            4789999998 99999999999999999999999988777665 56643 2211  1 3333332     3899999997


Q ss_pred             cch-HHHHHHccccCCEEEEEccc
Q 042426          160 GKM-LDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       160 ~~~-~~~~~~~l~~~G~~v~~g~~  182 (270)
                      ... -...++.++++..++.++..
T Consensus       219 ~~ii~~~~l~~~k~~aliIDlas~  242 (287)
T TIGR02853       219 ALVLTADVLSKLPKHAVIIDLASK  242 (287)
T ss_pred             hHHhCHHHHhcCCCCeEEEEeCcC
Confidence            643 24567788888888888763

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.81  E-value=0.00017  Score=58.19  Aligned_cols=81  Identities=20%  Similarity=0.299  Sum_probs=60.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----C---CceeecCCchhHHHHHHhHcCC-Cc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG----F---DDAFNYKEEPDLDAALNRCFPE-GI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g----~---~~vi~~~~~~~~~~~i~~~~~~-~~  151 (270)
                      -|++.+|+||+.++|.+-+.=+...|.+|+.+.|++++++.++++..    .   .+++|+.+++...+.+.+...+ .+
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            47899999999999986555444489999999999999988875543    2   1567888762224555555555 78


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      -+.+|++|-
T Consensus       128 gILVNNvG~  136 (312)
T KOG1014|consen  128 GILVNNVGM  136 (312)
T ss_pred             EEEEecccc
Confidence            899999983

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.81  E-value=0.00021  Score=59.64  Aligned_cols=80  Identities=14%  Similarity=0.250  Sum_probs=56.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----C-CC---ceeecCCc-hhHHHHHHhHcCC-
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----G-FD---DAFNYKEE-PDLDAALNRCFPE-  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g-~~---~vi~~~~~-~~~~~~i~~~~~~-  149 (270)
                      .|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++    + ..   ...|..+. .+..+.+.+...+ 
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            4789999999999999999888888999999999998877665333    1 11   12344421 1333444444444 


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|++++++|
T Consensus       132 didilVnnAG  141 (320)
T PLN02780        132 DVGVLINNVG  141 (320)
T ss_pred             CccEEEEecC
Confidence            5779999887

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.80  E-value=0.0005  Score=54.98  Aligned_cols=102  Identities=19%  Similarity=0.234  Sum_probs=64.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      +.+++|+|++|++|..+++.+...|.+|+++.++.+ +.+.+.+++   +..   ...|..+.++..+.+.+...  +++
T Consensus         6 ~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (248)
T PRK07806          6 GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGL   85 (248)
T ss_pred             CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            578999999999999999998889999999887643 333332122   321   12355554233333333221  268


Q ss_pred             cEEEeCCCcc--------------------hHHHHHHccccCCEEEEEccc
Q 042426          152 DIYFENVGGK--------------------MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       152 d~v~d~~g~~--------------------~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      |+++.+.|..                    .++.+.+.+..+|+++.++..
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~  136 (248)
T PRK07806         86 DALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH  136 (248)
T ss_pred             cEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence            9999887631                    234455555566888887663

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.78  E-value=0.0003  Score=59.98  Aligned_cols=112  Identities=17%  Similarity=0.094  Sum_probs=77.2

Q ss_pred             ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhH
Q 042426           60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDL  139 (270)
Q Consensus        60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  139 (270)
                      +|..+....+..+.+..++++|++||-+|  +|.|..+..+++..|++|++++.+++..+.+++.. ....++.... ++
T Consensus       147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIG--cG~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D~  222 (383)
T PRK11705        147 TLEEAQEAKLDLICRKLQLKPGMRVLDIG--CGWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-DY  222 (383)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCEEEEeC--CCccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-ch
Confidence            33344444555565667889999999998  57888899999988999999999999999988443 2211222222 33


Q ss_pred             HHHHHhHcCCCccEEEeC-----CCc----chHHHHHHccccCCEEEEEc
Q 042426          140 DAALNRCFPEGIDIYFEN-----VGG----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       140 ~~~i~~~~~~~~d~v~d~-----~g~----~~~~~~~~~l~~~G~~v~~g  180 (270)
                      ..    . .+.||.|+..     +|.    ..++.+.+.|+|+|.++...
T Consensus       223 ~~----l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        223 RD----L-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             hh----c-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            21    1 2468988743     332    35788888999999988643

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.77  E-value=8.8e-05  Score=60.13  Aligned_cols=100  Identities=21%  Similarity=0.289  Sum_probs=62.9

Q ss_pred             HhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHc
Q 042426           71 GLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        71 ~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      .+.+..++++|++||-+|  +|.|-.++.+++..|++|++++.|++..+.++++   .|....+..... ++.    +. 
T Consensus        53 ~~~~~~~l~~G~~vLDiG--cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~~----~~-  124 (273)
T PF02353_consen   53 LLCEKLGLKPGDRVLDIG--CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DYR----DL-  124 (273)
T ss_dssp             HHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--GG----G--
T ss_pred             HHHHHhCCCCCCEEEEeC--CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ecc----cc-
Confidence            344678899999999998  6799999999999999999999999988887643   343211111111 221    11 


Q ss_pred             CCCccEEEe-----CCCc----chHHHHHHccccCCEEEE
Q 042426          148 PEGIDIYFE-----NVGG----KMLDAVLLNMRICGHIAV  178 (270)
Q Consensus       148 ~~~~d~v~d-----~~g~----~~~~~~~~~l~~~G~~v~  178 (270)
                      ++.||.|+.     .+|.    ..++.+.+.|+|+|+++.
T Consensus       125 ~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~l  164 (273)
T PF02353_consen  125 PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVL  164 (273)
T ss_dssp             --S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEE
T ss_pred             CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEE
Confidence            115888754     4443    257888999999999874

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.77  E-value=0.00018  Score=58.27  Aligned_cols=80  Identities=21%  Similarity=0.270  Sum_probs=55.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+...+++   +..   ...|..+.+++...+.+..  .+++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999999899999999998877655443232   221   1245555423444444432  1368


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |+++.+.|
T Consensus        88 D~vi~~ag   95 (264)
T PRK07576         88 DVLVSGAA   95 (264)
T ss_pred             CEEEECCC
Confidence            99998876

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.76  E-value=0.00026  Score=54.17  Aligned_cols=108  Identities=20%  Similarity=0.259  Sum_probs=73.6

Q ss_pred             CchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCceeecCCchh
Q 042426           62 GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK---HKFGFDDAFNYKEEPD  138 (270)
Q Consensus        62 ~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~---~~~g~~~vi~~~~~~~  138 (270)
                      ..+...|. ++ +...+++|++||=+|  +|.|..++-+++..+ +|+.+.+.++=.+.++   +.+|..+|.....  |
T Consensus        56 s~P~~vA~-m~-~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g--D  128 (209)
T COG2518          56 SAPHMVAR-ML-QLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHG--D  128 (209)
T ss_pred             cCcHHHHH-HH-HHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC--C
Confidence            33444443 33 567899999999999  788999999999888 9999998876333332   1678755432222  1


Q ss_pred             HHHHHHhHcCC-CccEEEeCCCcchH-HHHHHccccCCEEEEE
Q 042426          139 LDAALNRCFPE-GIDIYFENVGGKML-DAVLLNMRICGHIAVC  179 (270)
Q Consensus       139 ~~~~i~~~~~~-~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~  179 (270)
                      -...   .... .||.|+-+.+.+.. +..++.|+++|+++.-
T Consensus       129 G~~G---~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P  168 (209)
T COG2518         129 GSKG---WPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIP  168 (209)
T ss_pred             cccC---CCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence            1111   1122 69999887776544 6788999999999864

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.76  E-value=0.00022  Score=57.37  Aligned_cols=111  Identities=19%  Similarity=0.209  Sum_probs=77.5

Q ss_pred             hhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHH
Q 042426           64 PGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLD  140 (270)
Q Consensus        64 ~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~  140 (270)
                      +=..+...+.+..++++|+++|=+|  +|.|.+++..|+.+|++|++++-|++..+.++++   .|...-+...-. ++.
T Consensus        56 AQ~~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~-d~r  132 (283)
T COG2230          56 AQRAKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ-DYR  132 (283)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec-ccc
Confidence            3345556666788999999999998  8999999999999999999999999988887743   344311111000 111


Q ss_pred             HHHHhHcCCCccEEE-----eCCCc----chHHHHHHccccCCEEEEEccc
Q 042426          141 AALNRCFPEGIDIYF-----ENVGG----KMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       141 ~~i~~~~~~~~d~v~-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                          +. .+.||.|+     +.+|.    ..+..+.++|+|+|+++.-...
T Consensus       133 ----d~-~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~  178 (283)
T COG2230         133 ----DF-EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT  178 (283)
T ss_pred             ----cc-ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence                11 11377764     45554    2678899999999998865443

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.75  E-value=0.00027  Score=56.52  Aligned_cols=80  Identities=18%  Similarity=0.267  Sum_probs=56.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeecCCchhHHH---HHHhHcCCCccE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD---AFNYKEEPDLDA---ALNRCFPEGIDI  153 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~---~i~~~~~~~~d~  153 (270)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..+...   .+.+.. +++|+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~   83 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAF-GRLDA   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence            35789999999999999999999999999999998877766654666431   123333312222   222221 36899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      ++.++|.
T Consensus        84 vi~~ag~   90 (249)
T PRK06500         84 VFINAGV   90 (249)
T ss_pred             EEECCCC
Confidence            9999873

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.75  E-value=0.00023  Score=57.63  Aligned_cols=81  Identities=19%  Similarity=0.249  Sum_probs=56.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CC-C---ceeecCCchhHHHHHHhHc--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GF-D---DAFNYKEEPDLDAALNRCF--PE  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~-~---~vi~~~~~~~~~~~i~~~~--~~  149 (270)
                      .+.+++|+|+++++|.++++.+...|++|+++++++++.+.+.+++    +. .   ...|..+..+..+.+.+..  .+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            3678999999999999999999999999999999887765544232    11 1   1235555423333333322  23


Q ss_pred             CccEEEeCCCc
Q 042426          150 GIDIYFENVGG  160 (270)
Q Consensus       150 ~~d~v~d~~g~  160 (270)
                      ++|++++++|.
T Consensus        87 ~id~li~~Ag~   97 (265)
T PRK07062         87 GVDMLVNNAGQ   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            68999999983

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.0003  Score=56.91  Aligned_cols=80  Identities=19%  Similarity=0.253  Sum_probs=55.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      ++.+++|+|++|++|...++.+...|++|+++++++++.+.+.+.+   +..   ...|..+.....+.+.+...  +++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999889999999999887766554332   221   12455554233333333211  368


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        89 d~vi~~Ag   96 (263)
T PRK07814         89 DIVVNNVG   96 (263)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00024  Score=57.07  Aligned_cols=80  Identities=23%  Similarity=0.304  Sum_probs=56.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|+|+++++|..+++.+...|++|+++.++.++.+.+.+++   +..   ...|..+.+++.+.+.+..  .+++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            3678999999999999999999999999999999888776665443   221   1235554423333333321  1369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |+++.+.|
T Consensus        88 d~lv~~ag   95 (253)
T PRK05867         88 DIAVCNAG   95 (253)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00028  Score=57.61  Aligned_cols=80  Identities=19%  Similarity=0.195  Sum_probs=56.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIYF  155 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v~  155 (270)
                      +.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+..+..   ...|..+.......+.+...  +++|+++
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv   83 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV   83 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            468999999999999999999889999999999988877666333321   12355544233333333221  3589999


Q ss_pred             eCCCc
Q 042426          156 ENVGG  160 (270)
Q Consensus       156 d~~g~  160 (270)
                      ++.|.
T Consensus        84 ~~ag~   88 (277)
T PRK06180         84 NNAGY   88 (277)
T ss_pred             ECCCc
Confidence            99884

>PRK08017 oxidoreductase; Provisional

Probab=97.72  E-value=0.00043  Score=55.65  Aligned_cols=77  Identities=17%  Similarity=0.303  Sum_probs=56.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHH---HHHHhHcCCCccEEEeC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLD---AALNRCFPEGIDIYFEN  157 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~---~~i~~~~~~~~d~v~d~  157 (270)
                      .+++|+|++|++|..+++.+...|++|++++++.++.+.++ +.+... ..|..+..+..   +.+.+...+.+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            47999999999999999999999999999999988888776 566542 34554432222   23333333468898888


Q ss_pred             CC
Q 042426          158 VG  159 (270)
Q Consensus       158 ~g  159 (270)
                      .|
T Consensus        82 ag   83 (256)
T PRK08017         82 AG   83 (256)
T ss_pred             CC
Confidence            77

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.71  E-value=0.00058  Score=52.09  Aligned_cols=104  Identities=17%  Similarity=0.296  Sum_probs=76.1

Q ss_pred             CcEEEEecC-CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchh---HHHHHHhHcCCCccEEE
Q 042426           81 GEYVYVSAA-SGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPD---LDAALNRCFPEGIDIYF  155 (270)
Q Consensus        81 g~~vlI~ga-~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~---~~~~i~~~~~~~~d~v~  155 (270)
                      ...|||+|. +||+|.+++.-....|+.|+++.|+-+....+..++|.. .-+|.+++++   +...+++...|..|+.+
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~   86 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLY   86 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEE
Confidence            357899886 589999999999999999999999999888777688863 4456655423   44556666667899999


Q ss_pred             eCCCcc-----------h--------------HHH--HHHccccCCEEEEEccccc
Q 042426          156 ENVGGK-----------M--------------LDA--VLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       156 d~~g~~-----------~--------------~~~--~~~~l~~~G~~v~~g~~~~  184 (270)
                      +.+|-+           .              ..+  .-.+++..|++|.+|+...
T Consensus        87 NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~  142 (289)
T KOG1209|consen   87 NNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG  142 (289)
T ss_pred             cCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence            988732           1              111  2235577899999887654

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00039  Score=57.85  Aligned_cols=79  Identities=18%  Similarity=0.205  Sum_probs=54.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-----GFD---DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      |.+++|+||++++|.++++.+...|++|++++++.++.+.+.+++     +..   ...|..+..+..+.+.+..  .+.
T Consensus        14 gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~   93 (313)
T PRK05854         14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRP   93 (313)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            578999999999999999988889999999999987765544333     111   1235544423333332221  236


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        94 iD~li~nAG  102 (313)
T PRK05854         94 IHLLINNAG  102 (313)
T ss_pred             ccEEEECCc
Confidence            899999887

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00025  Score=57.27  Aligned_cols=80  Identities=14%  Similarity=0.162  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-----CC---ceeecCCchhHHHHHHhHc--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-----FD---DAFNYKEEPDLDAALNRCF--PE  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-----~~---~vi~~~~~~~~~~~i~~~~--~~  149 (270)
                      .+.+++|+|+++++|..+++.+...|++|+++++++++.+.+.+++.     ..   ...|..+..++...+.+..  .+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999998877666553432     11   1234444423333333321  13


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|++++++|
T Consensus        86 ~id~li~~ag   95 (260)
T PRK07063         86 PLDVLVNNAG   95 (260)
T ss_pred             CCcEEEECCC
Confidence            6999999988

>PRK06196 oxidoreductase; Provisional

Probab=97.71  E-value=0.00036  Score=58.11  Aligned_cols=80  Identities=18%  Similarity=0.231  Sum_probs=56.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CC-ceeecCCchhHHHHHHhHcC--CCccEEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-FD-DAFNYKEEPDLDAALNRCFP--EGIDIYF  155 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v~  155 (270)
                      .+.+++|+||+|++|..++..+...|++|++++++.++.+.+.+++. .. ...|..+..+..+.+.+...  +++|+++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            35789999999999999999888899999999999887665543432 21 22355554234333433322  3799999


Q ss_pred             eCCC
Q 042426          156 ENVG  159 (270)
Q Consensus       156 d~~g  159 (270)
                      +++|
T Consensus       105 ~nAg  108 (315)
T PRK06196        105 NNAG  108 (315)
T ss_pred             ECCC
Confidence            9987

>PRK05884 short chain dehydrogenase; Provisional

Probab=97.70  E-value=0.00039  Score=54.85  Aligned_cols=76  Identities=12%  Similarity=0.152  Sum_probs=54.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +++|+||++++|..+++.+...|++|+.+.++.++.+.+.++.+.. ...|..+..++.+.+.+.. +.+|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence            5899999999999999999889999999999988877665455543 2245555423444333322 25899998865

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.70  E-value=0.00032  Score=56.44  Aligned_cols=81  Identities=25%  Similarity=0.340  Sum_probs=56.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+.+   +..   ...|..+..++.+.+.+..  .+++
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTI   87 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999999999999999999988776665332   111   1234444323433333321  2368


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+++++.|.
T Consensus        88 d~li~~ag~   96 (258)
T PRK06949         88 DILVNNSGV   96 (258)
T ss_pred             CEEEECCCC
Confidence            999999983

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.70  E-value=0.00024  Score=58.51  Aligned_cols=80  Identities=24%  Similarity=0.376  Sum_probs=55.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD-D--AFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +.+++|+||+|++|.++++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+..++.+.+.+..  .+++|
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id  119 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVD  119 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999998888999999999988766654332   221 1  134444423333333221  13689


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      ++++++|.
T Consensus       120 ~li~~AG~  127 (293)
T PRK05866        120 ILINNAGR  127 (293)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.69  E-value=0.00039  Score=55.87  Aligned_cols=80  Identities=26%  Similarity=0.379  Sum_probs=55.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d  152 (270)
                      +.+++|+|+++++|..+++.+...|++|+.+++++++.+.+.+++   +..   ...|..+.++..+.+.+...  +++|
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLD   85 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            568999999999999999998889999999999888776654333   322   11344444233333333221  3689


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      +++.++|.
T Consensus        86 ~li~~ag~   93 (254)
T PRK07478         86 IAFNNAGT   93 (254)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00028  Score=56.78  Aligned_cols=81  Identities=21%  Similarity=0.243  Sum_probs=56.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      ++.+++|+||++++|..+++.+...|++|+++++++++.+.+.+++   +..   ...|..+.+++...+.+...  +.+
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            4578999999999999999999999999999999887766555343   221   22344444233333333211  358


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+++.+.|.
T Consensus        84 d~vi~~ag~   92 (258)
T PRK07890         84 DALVNNAFR   92 (258)
T ss_pred             cEEEECCcc
Confidence            999998873

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.67  E-value=0.0022  Score=49.39  Aligned_cols=78  Identities=23%  Similarity=0.299  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CC-ceeecCCchhHHHHHHhHcCCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG----FD-DAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g----~~-~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      ++.+++|.|++|++|..++..+...|.+|+++.|+.++.+.+.++++    .. ...+..+..+..+.+.     ++|+|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~diV  101 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-----GADVV  101 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-----cCCEE
Confidence            46799999999999999988888889999999999888776654443    22 1122222212333332     38999


Q ss_pred             EeCCCcch
Q 042426          155 FENVGGKM  162 (270)
Q Consensus       155 ~d~~g~~~  162 (270)
                      |.++....
T Consensus       102 i~at~~g~  109 (194)
T cd01078         102 FAAGAAGV  109 (194)
T ss_pred             EECCCCCc
Confidence            99887644

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.66  E-value=7.6e-05  Score=67.19  Aligned_cols=97  Identities=16%  Similarity=0.246  Sum_probs=64.8

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC---------------------HHHHHHHHHHhCCCceeecCC
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS---------------------KEKVDLLKHKFGFDDAFNYKE  135 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~---------------------~~~~~~~~~~~g~~~vi~~~~  135 (270)
                      ..++|++|+|+|+ |+.|+++++.++.+|++|+++...                     +.+.+.++ ++|++..++...
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~  210 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV  210 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence            3677999999998 999999999999999999998742                     34566677 788865554332


Q ss_pred             -chhH-HHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEc
Q 042426          136 -EPDL-DAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       136 -~~~~-~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g  180 (270)
                       . +. .+.+    ..++|.||+++|.. .....+......|.+..++
T Consensus       211 ~~-~~~~~~~----~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~  253 (564)
T PRK12771        211 GE-DITLEQL----EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVD  253 (564)
T ss_pred             CC-cCCHHHH----HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHH
Confidence             1 21 1112    12599999999974 3333333444455554443

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.66  E-value=0.00046  Score=55.31  Aligned_cols=78  Identities=21%  Similarity=0.361  Sum_probs=55.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEEEeC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIYFEN  157 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v~d~  157 (270)
                      +++|+|++|++|..+++.+...|++|+++++++++.+.+.+.++..   ...|..+..++.+.+.+...  +++|+++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            6899999999999999999889999999999988877766445542   12344444233333333221  368999998


Q ss_pred             CCc
Q 042426          158 VGG  160 (270)
Q Consensus       158 ~g~  160 (270)
                      +|.
T Consensus        82 ag~   84 (248)
T PRK10538         82 AGL   84 (248)
T ss_pred             CCc
Confidence            873

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.66  E-value=0.00036  Score=55.88  Aligned_cols=80  Identities=24%  Similarity=0.320  Sum_probs=55.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--CC---ceeecCCchhHHHHHHhHc--CCCccE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG--FD---DAFNYKEEPDLDAALNRCF--PEGIDI  153 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g--~~---~vi~~~~~~~~~~~i~~~~--~~~~d~  153 (270)
                      +.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+.  ..   ...|..+..++...+.+..  .+.+|+
T Consensus         5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   84 (251)
T PRK07231          5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDI   84 (251)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4689999999999999999988889999999999887766553443  11   1234444423433333321  136899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      ++.+.|.
T Consensus        85 vi~~ag~   91 (251)
T PRK07231         85 LVNNAGT   91 (251)
T ss_pred             EEECCCC
Confidence            9999874

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.65  E-value=0.00049  Score=55.59  Aligned_cols=83  Identities=22%  Similarity=0.308  Sum_probs=56.6

Q ss_pred             CCCCcEEEEecCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCCce----eecCCchhHHHHHHhHc-
Q 042426           78 PKKGEYVYVSAASG-AVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK----FGFDDA----FNYKEEPDLDAALNRCF-  147 (270)
Q Consensus        78 ~~~g~~vlI~ga~g-~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~----~g~~~v----i~~~~~~~~~~~i~~~~-  147 (270)
                      +..+.+++|+|++| ++|.++++.+...|++|+++++++++.+...++    ++...+    .|..+..++...+.+.. 
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            34468999999986 899999999999999999999887766554422    343222    35555423333333321 


Q ss_pred             -CCCccEEEeCCCc
Q 042426          148 -PEGIDIYFENVGG  160 (270)
Q Consensus       148 -~~~~d~v~d~~g~  160 (270)
                       .+++|+++++.|.
T Consensus        94 ~~g~id~li~~ag~  107 (262)
T PRK07831         94 RLGRLDVLVNNAGL  107 (262)
T ss_pred             HcCCCCEEEECCCC
Confidence             1368999999983

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.64  E-value=0.00042  Score=54.68  Aligned_cols=78  Identities=19%  Similarity=0.215  Sum_probs=54.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .+++|+|++|++|...++.+...|++|+++++++++.+.++ +.+-.  ...|..+.+++.+.+.+...+++|+++.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            36999999999999999988888999999999887766665 43321  2245555423434343333347999999876


Q ss_pred             c
Q 042426          160 G  160 (270)
Q Consensus       160 ~  160 (270)
                      .
T Consensus        81 ~   81 (225)
T PRK08177         81 I   81 (225)
T ss_pred             c
Confidence            3

>PRK05717 oxidoreductase; Validated

Probab=97.63  E-value=0.0005  Score=55.33  Aligned_cols=80  Identities=18%  Similarity=0.238  Sum_probs=55.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIYF  155 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v~  155 (270)
                      |.+++|+|++|++|..++..+...|++|+++.++.++.+.+.++++..   ...|..+..+..+.+.+...  +.+|+++
T Consensus        10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li   89 (255)
T PRK05717         10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALV   89 (255)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            578999999999999999998888999999988876655554344432   12344444233333333221  3589999


Q ss_pred             eCCCc
Q 042426          156 ENVGG  160 (270)
Q Consensus       156 d~~g~  160 (270)
                      .+.|.
T Consensus        90 ~~ag~   94 (255)
T PRK05717         90 CNAAI   94 (255)
T ss_pred             ECCCc
Confidence            99873

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.63  E-value=0.00057  Score=56.12  Aligned_cols=96  Identities=18%  Similarity=0.170  Sum_probs=62.3

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC---CCceeecCCchhHHHHHHhHcCCCccE
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFG---FDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g---~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      ..++++||-.|.  |.|..++.+++ +|+ +|++++.++...+.+++...   ....+..... +    ......++||+
T Consensus       157 ~~~g~~VLDvGc--GsG~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDl  228 (288)
T TIGR00406       157 DLKDKNVIDVGC--GSGILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADV  228 (288)
T ss_pred             cCCCCEEEEeCC--ChhHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceE
Confidence            457899999984  44877777665 465 99999999988877763322   2111111111 1    11112237999


Q ss_pred             EEeCCCcc----hHHHHHHccccCCEEEEEcc
Q 042426          154 YFENVGGK----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       154 v~d~~g~~----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      |+......    .+....+.|+|+|.++..|.
T Consensus       229 Vvan~~~~~l~~ll~~~~~~LkpgG~li~sgi  260 (288)
T TIGR00406       229 IVANILAEVIKELYPQFSRLVKPGGWLILSGI  260 (288)
T ss_pred             EEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            98765432    56677899999999998765

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.62  E-value=0.00043  Score=56.46  Aligned_cols=80  Identities=19%  Similarity=0.315  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|+|++|++|.++++.+...|++|+++.++.++.+.+.+++   +..   ...|..+.+++.+.+.+..  .+.+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999999999999998877666554333   322   1235444423333333221  1368


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |+++++.|
T Consensus        85 d~li~nAg   92 (275)
T PRK05876         85 DVVFSNAG   92 (275)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.62  E-value=0.00045  Score=55.76  Aligned_cols=78  Identities=26%  Similarity=0.306  Sum_probs=54.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC--ceeecCCchhHHHHHHhHc--CCCccEEE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD--DAFNYKEEPDLDAALNRCF--PEGIDIYF  155 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~vi~~~~~~~~~~~i~~~~--~~~~d~v~  155 (270)
                      +++|+|+++++|.++++.+...|++|+++.+++++.+.+.+++   +..  ...|..+.++..+.+.+..  .+++|+++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6899999999999999999889999999999887766554343   211  1234444423443333322  23689999


Q ss_pred             eCCCc
Q 042426          156 ENVGG  160 (270)
Q Consensus       156 d~~g~  160 (270)
                      ++.|.
T Consensus        82 ~naG~   86 (259)
T PRK08340         82 WNAGN   86 (259)
T ss_pred             ECCCC
Confidence            99873

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.61  E-value=0.00049  Score=55.35  Aligned_cols=81  Identities=22%  Similarity=0.312  Sum_probs=55.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.++||+|++|++|..+++.+...|++|+++.+++++.+.+.+++   |..   ...|..+..++.+.+.+..  .+++
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            3678999999999999999988888999999999887665544333   221   1235554423333333322  2368


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+++.+.|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999999974

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.61  E-value=0.0011  Score=53.91  Aligned_cols=78  Identities=13%  Similarity=0.173  Sum_probs=53.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC----ceeecCCchhHHHHHHhHc--CCCccE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD----DAFNYKEEPDLDAALNRCF--PEGIDI  153 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~----~vi~~~~~~~~~~~i~~~~--~~~~d~  153 (270)
                      +++|+||+|++|..+++.+...|++|+++.+++++.+.+.++   .+..    ...|..+..+....+.+..  .+++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            689999999999999999988999999999887765544323   2322    1246555423333233221  136899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      ++++.|.
T Consensus        82 lv~~ag~   88 (272)
T PRK07832         82 VMNIAGI   88 (272)
T ss_pred             EEECCCC
Confidence            9999974

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.61  E-value=0.00064  Score=54.80  Aligned_cols=79  Identities=19%  Similarity=0.209  Sum_probs=55.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----C-ceeecCCchhHHHHHHhHcC--CCccE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF----D-DAFNYKEEPDLDAALNRCFP--EGIDI  153 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~----~-~vi~~~~~~~~~~~i~~~~~--~~~d~  153 (270)
                      +.+++|+|++|++|..+++.+...|++|+++.++.++.+.+.+++..    . ...|..+..++.+.+.+...  +.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            35899999999999999999888899999999988877666534322    1 12345544244443333221  25899


Q ss_pred             EEeCCC
Q 042426          154 YFENVG  159 (270)
Q Consensus       154 v~d~~g  159 (270)
                      +++++|
T Consensus        82 lv~~ag   87 (257)
T PRK07024         82 VIANAG   87 (257)
T ss_pred             EEECCC
Confidence            999887

>PRK09186 flagellin modification protein A; Provisional

Probab=97.61  E-value=0.00046  Score=55.50  Aligned_cols=80  Identities=18%  Similarity=0.230  Sum_probs=55.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC---c-eeecCCchhHHHHHHhHc--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD---D-AFNYKEEPDLDAALNRCF--PE  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~-vi~~~~~~~~~~~i~~~~--~~  149 (270)
                      ++.+++|+|++|++|..++..+...|++|+++++++++.+.+.+++    +..   . ..|..+.+++.+.+.+..  .+
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999887766554343    221   1 235555423444343322  13


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|+++.+.+
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            6899999985

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.61  E-value=0.00063  Score=54.47  Aligned_cols=80  Identities=16%  Similarity=0.299  Sum_probs=54.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      ++.+++|+|++|++|+.+++.+...|++|+++++++++.+.+.++   .+..   ...|..+.++..+.+.....  +++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            367899999999999999999988999999999988766554422   2332   12344443233333333221  368


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |.+|.++|
T Consensus        84 d~vi~~ag   91 (253)
T PRK08217         84 NGLINNAG   91 (253)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.60  E-value=0.00057  Score=54.89  Aligned_cols=80  Identities=16%  Similarity=0.247  Sum_probs=54.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----ceeecCCchhHHHHHHhHc--CCCccE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD----DAFNYKEEPDLDAALNRCF--PEGIDI  153 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~--~~~~d~  153 (270)
                      .+.+++|+||+|++|..+++.+...|++|++++++++..+... +....    ...|..+..++.+.+.+..  .+++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            3578999999999999999999889999999998876554444 33221    1234444323333333221  136899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      ++.++|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9999973

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.60  E-value=0.00044  Score=54.90  Aligned_cols=80  Identities=18%  Similarity=0.291  Sum_probs=55.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---Cce--eecCCchhHHHHHHhHc--CCCccE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF---DDA--FNYKEEPDLDAALNRCF--PEGIDI  153 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v--i~~~~~~~~~~~i~~~~--~~~~d~  153 (270)
                      +.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++..   -+.  .|..+..++.+.+.+..  .+++|+
T Consensus         6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (237)
T PRK07326          6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDV   85 (237)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999998888899999999988776665534432   111  24444323433333321  136899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      +|++.|.
T Consensus        86 vi~~ag~   92 (237)
T PRK07326         86 LIANAGV   92 (237)
T ss_pred             EEECCCC
Confidence            9998863

>PRK06128 oxidoreductase; Provisional

Probab=97.60  E-value=0.0013  Score=54.34  Aligned_cols=105  Identities=16%  Similarity=0.186  Sum_probs=65.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHH---HhCCC---ceeecCCchhHHHHHHhHc--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE--KVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCF--PE  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~--~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~~  149 (270)
                      .+.++||+|+++++|..+++.+...|++|+++.++.+  +.+.+.+   ..+..   ...|..+..+..+.+.+..  .+
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            3578999999999999999999889999988875432  2222221   33432   1134444423333333321  13


Q ss_pred             CccEEEeCCCcc---------------------------hHHHHHHccccCCEEEEEccccc
Q 042426          150 GIDIYFENVGGK---------------------------MLDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       150 ~~d~v~d~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      ++|++++++|..                           .++.++..+..+|+++.+++...
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~  195 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS  195 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence            699999998731                           12334445567789998877544

>PRK06484 short chain dehydrogenase; Validated

Probab=97.59  E-value=0.00047  Score=61.55  Aligned_cols=81  Identities=23%  Similarity=0.311  Sum_probs=60.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      ++.+++|+|+++++|.++++.+...|++|++++++.++.+.+.++++..   ...|..+.+++.+.+.+..  .+++|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4678999999999999999999999999999999988877766566643   2345555434444443332  1369999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      +++.|.
T Consensus        84 i~nag~   89 (520)
T PRK06484         84 VNNAGV   89 (520)
T ss_pred             EECCCc
Confidence            999873

>PRK06194 hypothetical protein; Provisional

Probab=97.59  E-value=0.00049  Score=56.41  Aligned_cols=80  Identities=14%  Similarity=0.262  Sum_probs=54.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +.++||+||+|++|..+++.+...|++|++++++.++.+...+++   +..   ...|..+..++.+.+....  .+++|
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id   85 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH   85 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999988889999999998876655544333   322   1124444323333333221  13689


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      +++.++|.
T Consensus        86 ~vi~~Ag~   93 (287)
T PRK06194         86 LLFNNAGV   93 (287)
T ss_pred             EEEECCCC
Confidence            99999984

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.59  E-value=0.00067  Score=56.67  Aligned_cols=80  Identities=15%  Similarity=0.225  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---C-c--eeecCCchhHHHHHHhH--cCCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF---D-D--AFNYKEEPDLDAALNRC--FPEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~---~-~--vi~~~~~~~~~~~i~~~--~~~~~  151 (270)
                      .+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++..   . .  ..|..+..+..+.+.+.  ..+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            357899999999999999998888899999999988877666545432   1 1  23444442333333332  12368


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999987

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.59  E-value=0.00011  Score=64.41  Aligned_cols=95  Identities=17%  Similarity=0.213  Sum_probs=67.1

Q ss_pred             hhcCCCCCcEEE----EecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcC
Q 042426           74 ELCSPKKGEYVY----VSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        74 ~~~~~~~g~~vl----I~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~  148 (270)
                      .+.++++|+.+|    |+||+|++|.+++|+++..|++|+.+.+++.+....+ ..+.+ .++|.+.. .+.+.+.... 
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~~-  103 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKALY-  103 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHHH-
Confidence            356788899888    9999999999999999999999999886655443333 33443 45666554 3444443321 


Q ss_pred             CCccEEEeCCCcchHHHHHHccccCCEEEEEcccc
Q 042426          149 EGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       149 ~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                                  ..+...++.|.++|+++.++...
T Consensus       104 ------------~~~~~~l~~l~~~griv~i~s~~  126 (450)
T PRK08261        104 ------------EFFHPVLRSLAPCGRVVVLGRPP  126 (450)
T ss_pred             ------------HHHHHHHHhccCCCEEEEEcccc
Confidence                        24566778888889998887754

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.58  E-value=0.0015  Score=48.99  Aligned_cols=98  Identities=21%  Similarity=0.334  Sum_probs=68.4

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHH---HHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLK---HKFGFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~---~~~g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      .++++|+.++=.|+  +.|...++++.... .+||++.++++..+..+   ++||.+++.....  +.++.+.+..  .+
T Consensus        30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g--~Ap~~L~~~~--~~  103 (187)
T COG2242          30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG--DAPEALPDLP--SP  103 (187)
T ss_pred             hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec--cchHhhcCCC--CC
Confidence            45789999998884  55667778885443 49999999888776654   3688775433332  3344444322  48


Q ss_pred             cEEEeCCCc---chHHHHHHccccCCEEEEE
Q 042426          152 DIYFENVGG---KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       152 d~v~d~~g~---~~~~~~~~~l~~~G~~v~~  179 (270)
                      |.+|=--|.   ..++.++..|+++|++|.-
T Consensus       104 daiFIGGg~~i~~ile~~~~~l~~ggrlV~n  134 (187)
T COG2242         104 DAIFIGGGGNIEEILEAAWERLKPGGRLVAN  134 (187)
T ss_pred             CEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence            999865443   3789999999999999864

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.58  E-value=0.0029  Score=48.90  Aligned_cols=100  Identities=21%  Similarity=0.329  Sum_probs=68.6

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhC-CCceeecCCchhHHHHHHhHc
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKH---KFG-FDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~---~~g-~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      ....+.++++++..|+ |+ |.+++.+++..+  .+|+++..+++..+.+++   .++ .+++.... . +..+.+.. .
T Consensus        34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~-d~~~~l~~-~  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-G-EAPEILFT-I  108 (198)
T ss_pred             HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-e-chhhhHhh-c
Confidence            3457889999999995 44 999999988764  589999999888776653   355 23322121 1 33333322 2


Q ss_pred             CCCccEEEeCCCc----chHHHHHHccccCCEEEE
Q 042426          148 PEGIDIYFENVGG----KMLDAVLLNMRICGHIAV  178 (270)
Q Consensus       148 ~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~  178 (270)
                      .+.+|.||...+.    ..+..+.+.|+|+|+++.
T Consensus       109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            2369999986553    367788889999999885

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.00048  Score=55.32  Aligned_cols=79  Identities=19%  Similarity=0.245  Sum_probs=54.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ce--eecCCchhHHHHHHhHcC--CCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD-DA--FNYKEEPDLDAALNRCFP--EGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--i~~~~~~~~~~~i~~~~~--~~~d  152 (270)
                      |.+++|+|+++++|..+++.+...|++|+++++++++.+.+.+++   +.. ..  .|..+++++.+.+.+...  +.+|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            457999999999999999999999999999999887766554333   221 12  244444234333333221  3689


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      +++++.|
T Consensus        81 ~lI~~ag   87 (252)
T PRK07677         81 ALINNAA   87 (252)
T ss_pred             EEEECCC
Confidence            9999987

>PLN02253 xanthoxin dehydrogenase

Probab=97.57  E-value=0.00074  Score=55.15  Aligned_cols=80  Identities=16%  Similarity=0.191  Sum_probs=55.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-----ceeecCCchhHHHHHHhHcC--CCccE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-----DAFNYKEEPDLDAALNRCFP--EGIDI  153 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~~--~~~d~  153 (270)
                      +.+++|+|++|++|.++++.+...|++|++++++++..+.+.++++..     ...|..+.++..+.+.+...  +++|+
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~   97 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI   97 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            578999999999999999988888999999998877665554344321     12355554233333332211  36899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      +++++|.
T Consensus        98 li~~Ag~  104 (280)
T PLN02253         98 MVNNAGL  104 (280)
T ss_pred             EEECCCc
Confidence            9999873

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.00059  Score=54.09  Aligned_cols=80  Identities=13%  Similarity=0.190  Sum_probs=52.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD-DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      +.++||+|++|++|..+++.+...|++|+++++++++.....+++   +.. ...|..+..+..+.+.+..  .+++|++
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   86 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDAL   86 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEE
Confidence            678999999999999999998888999999998776543322122   222 1234444323333333221  1368999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      +.+.|.
T Consensus        87 i~~ag~   92 (239)
T PRK12828         87 VNIAGA   92 (239)
T ss_pred             EECCcc
Confidence            998873

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.0007  Score=54.49  Aligned_cols=83  Identities=12%  Similarity=0.156  Sum_probs=53.7

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHH-HHHHHHHh---CC-C-c--eeecCCchhHHHHHHhHcC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEK-VDLLKHKF---GF-D-D--AFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~-~~~~~~~~---g~-~-~--vi~~~~~~~~~~~i~~~~~  148 (270)
                      +..+.+++|+||+|++|..+++.+... |++|+++++++++ .+.+.+++   +. . +  ..|..+..+..+.+.+...
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence            456779999999999999999877666 5899999988764 44433233   32 1 1  2344443233333433322


Q ss_pred             -CCccEEEeCCCc
Q 042426          149 -EGIDIYFENVGG  160 (270)
Q Consensus       149 -~~~d~v~d~~g~  160 (270)
                       +++|+++.+.|.
T Consensus        85 ~g~id~li~~ag~   97 (253)
T PRK07904         85 GGDVDVAIVAFGL   97 (253)
T ss_pred             cCCCCEEEEeeec
Confidence             479999988764

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.00077  Score=54.37  Aligned_cols=79  Identities=19%  Similarity=0.315  Sum_probs=56.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CC---ceeecCCchhHHHHHHhH---cCCCccEE
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-FD---DAFNYKEEPDLDAALNRC---FPEGIDIY  154 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-~~---~vi~~~~~~~~~~~i~~~---~~~~~d~v  154 (270)
                      .++||+||+|++|..+++.+...|++|++++++.++.+.+.+..+ ..   ...|..+..++.+.+...   ..+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            369999999999999999888889999999999888777764443 11   234555542344433332   13478999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      +.++|.
T Consensus        82 i~~ag~   87 (260)
T PRK08267         82 FNNAGI   87 (260)
T ss_pred             EECCCC
Confidence            999984

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.00077  Score=55.85  Aligned_cols=80  Identities=21%  Similarity=0.276  Sum_probs=54.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC---ceeecCCchhHHHHHHhHcC--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-----GFD---DAFNYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~--~  149 (270)
                      .+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++     +..   ...|..+..+..+.+.+...  +
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   94 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP   94 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence            4578999999999999999988888999999999877655433222     111   12344444233333333321  3


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|+++.++|
T Consensus        95 ~iD~li~nAg  104 (306)
T PRK06197         95 RIDLLINNAG  104 (306)
T ss_pred             CCCEEEECCc
Confidence            6899999987

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.00074  Score=55.01  Aligned_cols=79  Identities=22%  Similarity=0.335  Sum_probs=55.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEEEe
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIYFE  156 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v~d  156 (270)
                      .++||+|++|++|..+++.+...|++|+++.+++++.+.+++..+..   ...|..+...+.+.+.+..  .+++|++|.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47999999999999999988888999999999988877776443322   1234454423333333321  136899999


Q ss_pred             CCCc
Q 042426          157 NVGG  160 (270)
Q Consensus       157 ~~g~  160 (270)
                      ++|.
T Consensus        83 ~ag~   86 (276)
T PRK06482         83 NAGY   86 (276)
T ss_pred             CCCC
Confidence            9873

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.00096  Score=52.48  Aligned_cols=78  Identities=18%  Similarity=0.202  Sum_probs=55.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      .+++|+|++|++|..+++.+...|++|++++++.++.+.++ ..+.. ...|..+..++...+.+...+++|+++.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            36899999999999999988888999999999888777766 44543 23455554233333333332368999998874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.53  E-value=0.00083  Score=54.08  Aligned_cols=79  Identities=20%  Similarity=0.307  Sum_probs=55.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIYF  155 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v~  155 (270)
                      +.+++|+|++|++|..+++.+...|++|++++++.++.+.+.++++..   ...|..+..+....+.+..  .+.+|+++
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   85 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILF   85 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            468999999999999999999989999999999988777666455432   1234444323333333321  13689999


Q ss_pred             eCCC
Q 042426          156 ENVG  159 (270)
Q Consensus       156 d~~g  159 (270)
                      .+.|
T Consensus        86 ~~ag   89 (257)
T PRK07067         86 NNAA   89 (257)
T ss_pred             ECCC
Confidence            9887

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.53  E-value=0.00067  Score=57.27  Aligned_cols=93  Identities=18%  Similarity=0.130  Sum_probs=67.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC---C-CceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFG---F-DDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g---~-~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      .+|||+|+ |++|+.+++.+...+ .+|++.+|+.++.+.+. ...   . ...+|-.+.....+.+++     +|+||+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~~-----~d~VIn   74 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIKD-----FDLVIN   74 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHhc-----CCEEEE
Confidence            46999998 999999999988777 79999999999988887 432   2 245666654344455544     799999


Q ss_pred             CCCcchHHHHHH-ccccCCEEEEEcc
Q 042426          157 NVGGKMLDAVLL-NMRICGHIAVCGM  181 (270)
Q Consensus       157 ~~g~~~~~~~~~-~l~~~G~~v~~g~  181 (270)
                      |.....-...++ |++.+=.++.+..
T Consensus        75 ~~p~~~~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          75 AAPPFVDLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             eCCchhhHHHHHHHHHhCCCEEEccc
Confidence            998764445554 4455556776655

>PRK09242 tropinone reductase; Provisional

Probab=97.53  E-value=0.00068  Score=54.59  Aligned_cols=81  Identities=21%  Similarity=0.302  Sum_probs=55.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC---ceeecCCchhHHHHHHhHc--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-----GFD---DAFNYKEEPDLDAALNRCF--PE  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~--~~  149 (270)
                      .+.+++|+|+++++|..+++.+...|++|++++++.++.+.+.+++     +..   ...|..+..+....+.+..  .+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999999999999999887766554333     211   1234444423333333321  13


Q ss_pred             CccEEEeCCCc
Q 042426          150 GIDIYFENVGG  160 (270)
Q Consensus       150 ~~d~v~d~~g~  160 (270)
                      ++|+++.+.|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            68999999984

>PRK08643 acetoin reductase; Validated

Probab=97.53  E-value=0.00064  Score=54.68  Aligned_cols=80  Identities=15%  Similarity=0.156  Sum_probs=54.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+++   +..   ...|..+.....+.+.+..  .+++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999889999999999887665554333   221   1234555423333333322  13689


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      +++.+.|.
T Consensus        82 ~vi~~ag~   89 (256)
T PRK08643         82 VVVNNAGV   89 (256)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK06720 hypothetical protein; Provisional

Probab=97.53  E-value=0.0013  Score=49.47  Aligned_cols=80  Identities=16%  Similarity=0.287  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|.||++++|...+..+...|++|+++.++.+..+.+.+++   +..   ...|..+..++.+.+.+..  .|++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999988888999999998877654443233   322   1233333323333332211  2468


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        95 DilVnnAG  102 (169)
T PRK06720         95 DMLFQNAG  102 (169)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.00088  Score=53.00  Aligned_cols=80  Identities=9%  Similarity=0.151  Sum_probs=55.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhH---cCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRC---FPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~---~~~~  150 (270)
                      +|.+++|+|+++++|.+.+..+...|++|+++.+++++.+.+.++.   +..   ...|..+.++..+.+.+.   .++.
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            3678999999999999999999889999999999888776554332   332   112444432333333322   2226


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|+++++.|
T Consensus        84 iD~li~nag   92 (227)
T PRK08862         84 PDVLVNNWT   92 (227)
T ss_pred             CCEEEECCc
Confidence            999999986

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.0011  Score=53.56  Aligned_cols=81  Identities=25%  Similarity=0.410  Sum_probs=55.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C-c--eeecCCchhHHHHHHhHc-CCCccE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--D-D--AFNYKEEPDLDAALNRCF-PEGIDI  153 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~--vi~~~~~~~~~~~i~~~~-~~~~d~  153 (270)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++..  . +  ..|..+..+..+.+.... .+.+|.
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            357899999999999999999888999999999998877766544311  1 1  134444322222222211 246899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      ++.++|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9999874

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.52  E-value=0.00082  Score=53.36  Aligned_cols=79  Identities=15%  Similarity=0.196  Sum_probs=53.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCC-ceeecCCchhHHHHHHhHcC--CCccEEEe
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV-DLLKHKFGFD-DAFNYKEEPDLDAALNRCFP--EGIDIYFE  156 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~-~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v~d  156 (270)
                      +.+++|+|+++++|..+++.+...|++|+++++++++. +.++ ..+.. ...|..+.++..+.+.+...  +++|++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   80 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH   80 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence            35799999999999999999988999999999876543 3333 44532 12344443234443433322  36899999


Q ss_pred             CCCc
Q 042426          157 NVGG  160 (270)
Q Consensus       157 ~~g~  160 (270)
                      +.|.
T Consensus        81 ~ag~   84 (236)
T PRK06483         81 NASD   84 (236)
T ss_pred             CCcc
Confidence            9873

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.51  E-value=0.00083  Score=53.98  Aligned_cols=81  Identities=20%  Similarity=0.359  Sum_probs=55.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.++||+||++++|..+++.+...|++|+++.+++++.+.+.+++   +..   ...|..+.+++.+.+.+..  .+++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            3568999999999999999999889999999999877665544333   221   1234444423333333321  1368


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+++.+.|.
T Consensus        88 d~vi~~ag~   96 (254)
T PRK08085         88 DVLINNAGI   96 (254)
T ss_pred             CEEEECCCc
Confidence            999999973

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.00077  Score=53.95  Aligned_cols=80  Identities=19%  Similarity=0.238  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|+|++|++|..+++.+...|++|+++.+++++.+.+.+++   +..   ...|..+..+....+.+..  .+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            3568999999999999999988888999999999876655443232   211   1234444323332222221  1258


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++|.++|
T Consensus        85 d~vi~~ag   92 (250)
T PRK07774         85 DYLVNNAA   92 (250)
T ss_pred             CEEEECCC
Confidence            99999988

>PRK08589 short chain dehydrogenase; Validated

Probab=97.51  E-value=0.00071  Score=55.08  Aligned_cols=80  Identities=20%  Similarity=0.255  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      ++.++||+|+++++|..+++.+...|++|++++++ ++.+.+.+++   +..   ...|..+..+....+.+..  .+.+
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            36789999999999999999888899999999988 4443333233   221   2245555423333333322  1368


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus        84 d~li~~Ag~   92 (272)
T PRK08589         84 DVLFNNAGV   92 (272)
T ss_pred             CEEEECCCC
Confidence            999999873

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.51  E-value=0.00085  Score=53.65  Aligned_cols=80  Identities=21%  Similarity=0.294  Sum_probs=53.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-H-HHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-K-VDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~-~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      .+.+++|+|++|++|..+++.+...|++|++++++.. + .+.++ +.+..   ...|..+.+++...+.+..  .+++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3678999999999999999999889999999998652 1 22233 33422   2235554434443333322  13689


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      ++++++|.
T Consensus        83 ~li~~ag~   90 (248)
T TIGR01832        83 ILVNNAGI   90 (248)
T ss_pred             EEEECCCC
Confidence            99999873

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.00077  Score=55.01  Aligned_cols=79  Identities=19%  Similarity=0.306  Sum_probs=54.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-----ceeecCCchhHHHHHHhHcC--CC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD-----DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~-----~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      +.++||+||+|++|..++..+...|++|+++++++++.+.+.+.   .+.+     ...|..+.+++.. +.+...  ++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~   81 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR   81 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence            45799999999999999998888899999999988776555422   2211     1235555434444 444322  36


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|+++.+.|.
T Consensus        82 id~vv~~ag~   91 (280)
T PRK06914         82 IDLLVNNAGY   91 (280)
T ss_pred             eeEEEECCcc
Confidence            8999999873

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.0008  Score=54.36  Aligned_cols=79  Identities=20%  Similarity=0.326  Sum_probs=53.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCccE
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGIDI  153 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~  153 (270)
                      .+++|+|++|++|..+++.+...|++|+++++++++.+.+.+++   +..   ...|..+.+.+...+.+...  +++|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999998889999999999877655443232   321   12344444233333333221  35899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      ++.|.|.
T Consensus        82 vi~~ag~   88 (263)
T PRK06181         82 LVNNAGI   88 (263)
T ss_pred             EEECCCc
Confidence            9999874

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.00084  Score=53.68  Aligned_cols=79  Identities=18%  Similarity=0.285  Sum_probs=54.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-----GFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      +.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+.+     +..   ...|..+..++.+.+.+...  ++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999888888999999999888776554222     211   12355554234443333321  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|+++.+.|
T Consensus        82 id~vi~~ag   90 (248)
T PRK08251         82 LDRVIVNAG   90 (248)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.0011  Score=54.04  Aligned_cols=80  Identities=23%  Similarity=0.247  Sum_probs=55.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeecCCchhHHHHHHhHc--CCCccEEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-D--AFNYKEEPDLDAALNRCF--PEGIDIYF  155 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~--~~~~d~v~  155 (270)
                      +.+++|+||+|++|..+++.+...|.+|++++++.++.+.+.+..+.. .  ..|..+..++...+.+..  .+++|.++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            357999999999999999988888999999999988777665344322 1  234444323333333221  13689999


Q ss_pred             eCCCc
Q 042426          156 ENVGG  160 (270)
Q Consensus       156 d~~g~  160 (270)
                      .++|.
T Consensus        83 ~~ag~   87 (275)
T PRK08263         83 NNAGY   87 (275)
T ss_pred             ECCCC
Confidence            99884

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.49  E-value=0.00091  Score=53.92  Aligned_cols=81  Identities=25%  Similarity=0.373  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .+.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+.+   +..   ...|..+..++.+.+.+...  +++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            3578999999999999999999889999999999887766554333   221   12355544234333333211  368


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |.++.++|.
T Consensus        91 d~vi~~ag~   99 (259)
T PRK08213         91 DILVNNAGA   99 (259)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK08703 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.0013  Score=52.27  Aligned_cols=80  Identities=19%  Similarity=0.273  Sum_probs=54.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-C---ceeecCC---c--hhHHHHHHhHcC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF-D---DAFNYKE---E--PDLDAALNRCFP  148 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~-~---~vi~~~~---~--~~~~~~i~~~~~  148 (270)
                      +.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+++   +. .   ...|..+   .  ..+.+.+.+...
T Consensus         6 ~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~   85 (239)
T PRK08703          6 DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQ   85 (239)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhC
Confidence            568999999999999999999889999999999988766554332   21 1   1123321   1  123334444443


Q ss_pred             CCccEEEeCCCc
Q 042426          149 EGIDIYFENVGG  160 (270)
Q Consensus       149 ~~~d~v~d~~g~  160 (270)
                      +.+|.++.++|.
T Consensus        86 ~~id~vi~~ag~   97 (239)
T PRK08703         86 GKLDGIVHCAGY   97 (239)
T ss_pred             CCCCEEEEeccc
Confidence            468999999883

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.001  Score=53.24  Aligned_cols=80  Identities=18%  Similarity=0.243  Sum_probs=54.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CCC---ceeecCCchhHHHHHHhHcC--CCccE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF--GFD---DAFNYKEEPDLDAALNRCFP--EGIDI  153 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~--g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~  153 (270)
                      +.+++|+|++|++|..+++.+...|++|++++++.++.+...++.  +..   ...|..+..+..+.+.+...  +++|+
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   84 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV   84 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            568999999999999999988888999999999887665554333  221   11344444233333333211  36899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      ++.+.|.
T Consensus        85 vi~~ag~   91 (252)
T PRK06138         85 LVNNAGF   91 (252)
T ss_pred             EEECCCC
Confidence            9999983

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.47  E-value=0.00092  Score=54.51  Aligned_cols=104  Identities=11%  Similarity=0.100  Sum_probs=68.7

Q ss_pred             CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCC--ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSKE---KVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~~---~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.+++|+||+  +++|+++++.+...|++|+++.++.+   +.+.+.++++..  ...|..+.++..+.+.+...  +.
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            36789999996  79999999999889999999988743   334443344532  22455554334444433322  46


Q ss_pred             ccEEEeCCCcc---------------h---------------HHHHHHccccCCEEEEEcccc
Q 042426          151 IDIYFENVGGK---------------M---------------LDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       151 ~d~v~d~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +|++++++|..               .               .+..+..+..+|+++.+++..
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~  146 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG  146 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence            89999998831               0               234555667789999887644

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.47  E-value=0.0026  Score=51.36  Aligned_cols=105  Identities=10%  Similarity=0.045  Sum_probs=67.0

Q ss_pred             CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhC-CC---ceeecCCchhHHHHHHhHcC--
Q 042426           80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSK---EKVDLLKHKFG-FD---DAFNYKEEPDLDAALNRCFP--  148 (270)
Q Consensus        80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~---~~~~~~~~~~g-~~---~vi~~~~~~~~~~~i~~~~~--  148 (270)
                      .+.+++|+||+  +++|.++++.+...|++|++++++.   ++.+.+.+++. ..   ...|..+.++..+.+.+...  
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            36789999997  7999999998888999999987542   44455543442 11   12355554344444443322  


Q ss_pred             CCccEEEeCCCcc-------h-----------------------HHHHHHccccCCEEEEEccccc
Q 042426          149 EGIDIYFENVGGK-------M-----------------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       149 ~~~d~v~d~~g~~-------~-----------------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      |++|++++++|..       .                       .+..+..+.++|+++.+++...
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  151 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG  151 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence            4689999987621       0                       1234445666799998876543

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.0013  Score=52.93  Aligned_cols=75  Identities=15%  Similarity=0.289  Sum_probs=52.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcCCCccEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      +.++||+|++|++|..+++.+...|++|+++++++++.+.+.+.   .+..   ...|..+.    +.+.+...+++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~id~v   77 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA----IDRAQAAEWDVDVL   77 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH----HHHHHHhcCCCCEE
Confidence            35799999999999999999999999999999987766555422   2222   12344443    12333223369999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      |.+.|
T Consensus        78 i~~ag   82 (257)
T PRK09291         78 LNNAG   82 (257)
T ss_pred             EECCC
Confidence            99987

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.46  E-value=0.00057  Score=55.48  Aligned_cols=77  Identities=19%  Similarity=0.392  Sum_probs=53.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d~  157 (270)
                      +.+++|+|++|++|..+++.+...|++|++++++.++.+...   +.. ...|..+..++.+.+.+..  .+.+|+++++
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~   80 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP---GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN   80 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC---CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            468999999999999999998888999999998876544321   222 2345555434444444332  2368999999


Q ss_pred             CCc
Q 042426          158 VGG  160 (270)
Q Consensus       158 ~g~  160 (270)
                      .|.
T Consensus        81 ag~   83 (270)
T PRK06179         81 AGV   83 (270)
T ss_pred             CCC
Confidence            984

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.46  E-value=0.0018  Score=52.16  Aligned_cols=79  Identities=23%  Similarity=0.384  Sum_probs=55.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-c--eeecCCchhHHHHHHhHcCCCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD-D--AFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~--vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      .+.+++|+|+++++|..+++.+...|++|+++++++++.+.+.+++    +.. +  ..|..+.+++.+.+.+.  +.+|
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id   83 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID   83 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence            3679999999999999999998889999999999887766654333    221 1  23444442333333332  3699


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      +++++.|.
T Consensus        84 ~lv~~ag~   91 (259)
T PRK06125         84 ILVNNAGA   91 (259)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.45  E-value=0.0011  Score=53.95  Aligned_cols=80  Identities=11%  Similarity=0.154  Sum_probs=53.4

Q ss_pred             CCcEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHhCCCc--eeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASG--AVGQLVGQFVKLVGCYVVGSARSKEKV---DLLKHKFGFDD--AFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g--~vG~~ai~la~~~g~~v~~~~~~~~~~---~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      ++.++||+|+++  ++|.++++.+...|++|+++.++++..   +.+.++.|...  ..|..+.++....+.+...  |.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            467899999986  999999999989999999988765322   33322345322  2355554334444433322  46


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        86 iD~lVnnAG   94 (271)
T PRK06505         86 LDFVVHAIG   94 (271)
T ss_pred             CCEEEECCc
Confidence            999999987

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.0009  Score=53.73  Aligned_cols=81  Identities=17%  Similarity=0.209  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|+|++|++|..+++.+...|++|+.+++++++.+.+.+.   .+..   ...|..+.+++...+.+..  .+++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            357899999999999999998888899999999988765544322   2322   1234444323333333221  1368


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+++.+.|.
T Consensus        86 d~li~~ag~   94 (253)
T PRK06172         86 DYAFNNAGI   94 (253)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.44  E-value=0.0012  Score=53.76  Aligned_cols=80  Identities=19%  Similarity=0.281  Sum_probs=54.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|+|+++++|+++++.+...|++|+++.+++++.+.+.+++   +..   ...|..+..+....+.+..  -+++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999999999999999877665554333   221   1234444323333333221  1368


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |+++.++|
T Consensus        89 d~li~~ag   96 (278)
T PRK08277         89 DILINGAG   96 (278)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.0012  Score=52.59  Aligned_cols=81  Identities=15%  Similarity=0.222  Sum_probs=55.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|+|++|++|..++..+...|.+|+++++++++.+.+.++.   +..   ...|..+..+....+.+..  .+++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999989999999999887765554332   221   1234444323333333321  1358


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+++.+.|.
T Consensus        85 d~lv~~ag~   93 (241)
T PRK07454         85 DVLINNAGM   93 (241)
T ss_pred             CEEEECCCc
Confidence            999999983

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.001  Score=53.33  Aligned_cols=79  Identities=22%  Similarity=0.335  Sum_probs=54.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeecCCchhHHHHHHhHcC--CCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD-D--AFNYKEEPDLDAALNRCFP--EGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~d  152 (270)
                      +.+++|+|++|++|.++++.+...|++|+.++++.++.+.+.+++   +.. +  ..|..+..+....+.+...  +.+|
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   87 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLD   87 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999989999999999877766554333   221 1  1244443233333333211  2589


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      +++.+.|
T Consensus        88 ~li~~ag   94 (252)
T PRK07035         88 ILVNNAA   94 (252)
T ss_pred             EEEECCC
Confidence            9999887

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.43  E-value=0.0014  Score=52.65  Aligned_cols=79  Identities=22%  Similarity=0.319  Sum_probs=54.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++.+.+....  .+++|
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   83 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVD   83 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999988888999999999887765554233   322   2235555423333333221  13689


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      +++.+++
T Consensus        84 ~vi~~a~   90 (258)
T PRK12429         84 ILVNNAG   90 (258)
T ss_pred             EEEECCC
Confidence            9999887

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.42  E-value=0.0015  Score=52.04  Aligned_cols=80  Identities=25%  Similarity=0.354  Sum_probs=54.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIYF  155 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v~  155 (270)
                      +.+++|+|++|++|..+++.+...|+.|+...++.++.+.+.+..+..   ...|..+.+++.+.+.+..  .+++|.++
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   85 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILV   85 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            568999999999999999998889999998888877776665344432   1234444323333333221  13689999


Q ss_pred             eCCCc
Q 042426          156 ENVGG  160 (270)
Q Consensus       156 d~~g~  160 (270)
                      .+.|.
T Consensus        86 ~~ag~   90 (245)
T PRK12936         86 NNAGI   90 (245)
T ss_pred             ECCCC
Confidence            99873

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.42  E-value=0.0011  Score=52.82  Aligned_cols=80  Identities=21%  Similarity=0.306  Sum_probs=54.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d  152 (270)
                      +.+++|.|++|++|..++..+...|++|+++++++++.+.+.+++   +..   ...|..+..++.+.+++...  +++|
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID   86 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence            468999999999999999988889999999999877655443232   221   12344444234444443321  3689


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      .++.+.|.
T Consensus        87 ~vi~~ag~   94 (239)
T PRK07666         87 ILINNAGI   94 (239)
T ss_pred             EEEEcCcc
Confidence            99998874

>PRK07074 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.0016  Score=52.43  Aligned_cols=80  Identities=20%  Similarity=0.273  Sum_probs=54.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD----DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      +.+++|+|++|++|...+..+...|++|++++++.++.+.+.+.+...    ...|..+..++...+.+...  +++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457999999999999999988888999999999888776655343211    12344444233333333211  358999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      +.+.|.
T Consensus        82 i~~ag~   87 (257)
T PRK07074         82 VANAGA   87 (257)
T ss_pred             EECCCC
Confidence            999974

>PRK08309 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.017  Score=43.73  Aligned_cols=91  Identities=16%  Similarity=0.161  Sum_probs=58.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c----eeecCCchhHHHHHHhHc--CCCccEEE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-D----AFNYKEEPDLDAALNRCF--PEGIDIYF  155 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~----vi~~~~~~~~~~~i~~~~--~~~~d~v~  155 (270)
                      +++|+||+ ++|..+++.+...|++|++.++++++.+.+...++.. .    ..|.++..+..+.+....  .+++|++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv   80 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV   80 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            58999997 5666677777778999999999888776665334321 1    136666534544444432  23689999


Q ss_pred             eCCCcchHHHHHHccccCC
Q 042426          156 ENVGGKMLDAVLLNMRICG  174 (270)
Q Consensus       156 d~~g~~~~~~~~~~l~~~G  174 (270)
                      +.+-...-+.....++..|
T Consensus        81 ~~vh~~~~~~~~~~~~~~g   99 (177)
T PRK08309         81 AWIHSSAKDALSVVCRELD   99 (177)
T ss_pred             EeccccchhhHHHHHHHHc
Confidence            9887655455555555444

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0029  Score=50.41  Aligned_cols=104  Identities=15%  Similarity=0.103  Sum_probs=63.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HhCCC-c--eeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKH---KFGFD-D--AFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      ++.+++|+|++|++|..+++.+...|++++.+.++.. ..+.+.+   ..+.. .  ..|..+..++.+.+.+..  .++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999999999888776433 2222221   22321 1  134444323333333321  136


Q ss_pred             ccEEEeCCCcc-----------h---------------HHHHHHccccCCEEEEEcccc
Q 042426          151 IDIYFENVGGK-----------M---------------LDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       151 ~d~v~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +|+++.++|..           .               ++.+++.++.+|+++.++...
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  142 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV  142 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence            89999998731           0               123344555678898887643

>PRK07985 oxidoreductase; Provisional

Probab=97.41  E-value=0.0021  Score=53.02  Aligned_cols=105  Identities=15%  Similarity=0.121  Sum_probs=65.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHcC--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK--EKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~--~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~  149 (270)
                      .+.+++|+||++++|.++++.+...|++|+++.++.  ++.+.+.+   +.+..   ...|..+.++..+.+.+...  +
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            456899999999999999999998999999877542  33333331   22322   22355444234443333322  3


Q ss_pred             CccEEEeCCCcc---------------------------hHHHHHHccccCCEEEEEccccc
Q 042426          150 GIDIYFENVGGK---------------------------MLDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       150 ~~d~v~d~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      ++|+++.+.|..                           .++..+..++.+|+++.+++...
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~  189 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence            689999987631                           01334445566789998877544

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=97.41  E-value=0.0016  Score=52.68  Aligned_cols=97  Identities=16%  Similarity=0.171  Sum_probs=74.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC--
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG--  159 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g--  159 (270)
                      .+|.|+|+ |-+|.-++++|.-+|++|...+.+.++++.+...++-..-.-+++...+.+.+.+     .|+++.++=  
T Consensus       169 ~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~-----aDlvIgaVLIp  242 (371)
T COG0686         169 AKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKK-----ADLVIGAVLIP  242 (371)
T ss_pred             ccEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhh-----ccEEEEEEEec
Confidence            35777887 9999999999999999999999999999999877776522334444356666654     899988662  


Q ss_pred             -c--c--hHHHHHHccccCCEEEEEccccc
Q 042426          160 -G--K--MLDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       160 -~--~--~~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                       .  +  ..++.++.|+|++.++.+....+
T Consensus       243 gakaPkLvt~e~vk~MkpGsVivDVAiDqG  272 (371)
T COG0686         243 GAKAPKLVTREMVKQMKPGSVIVDVAIDQG  272 (371)
T ss_pred             CCCCceehhHHHHHhcCCCcEEEEEEEcCC
Confidence             2  1  57888999999999998765433

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0015  Score=53.23  Aligned_cols=79  Identities=13%  Similarity=0.125  Sum_probs=54.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-----CC-ce--eecCCchhHHHHHHhHcC--CC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-----FD-DA--FNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-----~~-~v--i~~~~~~~~~~~i~~~~~--~~  150 (270)
                      +.+++|+|++|++|..+++.+...|++|+++++++++.+...+++.     .. .+  .|..+..+....+.+...  ++
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGR   86 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999988776554432321     11 11  244444233333333321  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|+++.+.|
T Consensus        87 ~d~li~~ag   95 (276)
T PRK05875         87 LHGVVHCAG   95 (276)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.40  E-value=0.0013  Score=52.75  Aligned_cols=79  Identities=18%  Similarity=0.300  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK--VDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~--~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      .+.+++|+|+++++|.++++.+...|++|+++.++...  .+.++ +.+..   ...|..+..+..+.+.+..  .+++|
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999999999999999999999988865422  22232 44432   1245555434444443321  23689


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      +++++.|
T Consensus        86 ~lv~~ag   92 (251)
T PRK12481         86 ILINNAG   92 (251)
T ss_pred             EEEECCC
Confidence            9999987

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.0013  Score=52.89  Aligned_cols=78  Identities=15%  Similarity=0.200  Sum_probs=53.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d  152 (270)
                      +.+++|+||+|++|..+++.+...|++|+++++++++.+... ++   +..   ...|..+..++...+.+...  +++|
T Consensus         7 ~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (258)
T PRK08628          7 DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAE-ELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID   85 (258)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHH-HHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            568999999999999999988889999999998877654333 32   322   22344444234333333221  3689


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      +++.++|
T Consensus        86 ~vi~~ag   92 (258)
T PRK08628         86 GLVNNAG   92 (258)
T ss_pred             EEEECCc
Confidence            9999998

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=97.38  E-value=0.0019  Score=53.73  Aligned_cols=80  Identities=14%  Similarity=0.157  Sum_probs=55.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCC----c--eeecCCchhHHHHHHhHc--CCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFD----D--AFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~----~--vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      +.+++|+|+++++|.++++.+...| ++|++++++.++.+.+.++++..    .  ..|..+.++....+.+..  .+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999998888889 89999999888776665455421    1  135544423333333321  2368


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus        83 D~lI~nAG~   91 (314)
T TIGR01289        83 DALVCNAAV   91 (314)
T ss_pred             CEEEECCCc
Confidence            999998873

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.38  E-value=0.0022  Score=55.27  Aligned_cols=74  Identities=20%  Similarity=0.240  Sum_probs=55.1

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      -.+.+++|.|+ |++|.+++..+...|+ +++++.|+.++.+.+.++++...++.+.   +..+.+.     .+|+||+|
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~-----~aDiVI~a  249 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIK-----KADIIIAA  249 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhc-----cCCEEEEC
Confidence            45678999997 9999999999999997 8999999988877777677622233221   2323332     39999999


Q ss_pred             CCcc
Q 042426          158 VGGK  161 (270)
Q Consensus       158 ~g~~  161 (270)
                      ++.+
T Consensus       250 T~a~  253 (414)
T PRK13940        250 VNVL  253 (414)
T ss_pred             cCCC
Confidence            9975

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.38  E-value=0.0013  Score=53.01  Aligned_cols=81  Identities=15%  Similarity=0.223  Sum_probs=53.8

Q ss_pred             CCcEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAA--SGAVGQLVGQFVKLVGCYVVGSARSK--EKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga--~g~vG~~ai~la~~~g~~v~~~~~~~--~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      .+.+++|+|+  ++++|.++++.+...|++|++++++.  +..+.+.++++..   ...|..+.++..+.+.+..  .++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999  79999999998888999999988653  3445554344432   2235554423333333322  246


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus        86 iD~li~nAG~   95 (256)
T PRK07889         86 LDGVVHSIGF   95 (256)
T ss_pred             CcEEEEcccc
Confidence            9999998873

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.37  E-value=0.0013  Score=52.79  Aligned_cols=79  Identities=14%  Similarity=0.124  Sum_probs=52.3

Q ss_pred             CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD----DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|+||+  +++|.++++.+...|++|+++.++++..+.++ ++...    ...|..+.++..+.+.+..  .+.+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            46789999998  79999999999889999999988744333343 33221    1234444423333333322  1368


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        85 D~lv~nAg   92 (252)
T PRK06079         85 DGIVHAIA   92 (252)
T ss_pred             CEEEEccc
Confidence            99999887

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=97.37  E-value=0.0042  Score=48.32  Aligned_cols=103  Identities=17%  Similarity=0.191  Sum_probs=75.2

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceee-cCCchhHHHHHHhHc
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKH---KFGFDDAFN-YKEEPDLDAALNRCF  147 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~vi~-~~~~~~~~~~i~~~~  147 (270)
                      .+.+.+...+||=+|  +++|.+++.+|..+.  .+++.+.++++..+.+++   +.|.+..+. .... +..+.+.+..
T Consensus        53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~  129 (219)
T COG4122          53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLL  129 (219)
T ss_pred             HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhcc
Confidence            445667778899998  899999999999876  489999999998887773   456654222 2213 5666666644


Q ss_pred             CCCccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426          148 PEGIDIYFENVGG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       148 ~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                      .+.||+||==...    ..++.++++|++||.++.=
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D  165 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD  165 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence            4589999754442    3789999999999998864

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.00099  Score=53.36  Aligned_cols=73  Identities=22%  Similarity=0.339  Sum_probs=48.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      +.+++|+||+|++|..+++.+...|++|++++++.. ..+...  .+..  ...|..+.   . .+.+.. +++|+++++
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~---~-~~~~~~-~~iDilVnn   86 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND--ESPNEWIKWECGKE---E-SLDKQL-ASLDVLILN   86 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc--cCCCeEEEeeCCCH---H-HHHHhc-CCCCEEEEC
Confidence            578999999999999999999899999999998762 222211  1111  12344433   1 222222 359999999


Q ss_pred             CCc
Q 042426          158 VGG  160 (270)
Q Consensus       158 ~g~  160 (270)
                      +|.
T Consensus        87 AG~   89 (245)
T PRK12367         87 HGI   89 (245)
T ss_pred             Ccc
Confidence            974

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.36  E-value=0.0014  Score=52.81  Aligned_cols=80  Identities=18%  Similarity=0.274  Sum_probs=54.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDD---AFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +.++||+|++|++|..+++.+...|++|+++++++++.+.+.++   .+...   ..|..+...+.+.+.+..  .+++|
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   86 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVD   86 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999999999999999988765544433   23321   134444423333333221  13589


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      +++.+.|.
T Consensus        87 ~vi~~ag~   94 (262)
T PRK13394         87 ILVSNAGI   94 (262)
T ss_pred             EEEECCcc
Confidence            99999874

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.36  E-value=0.0021  Score=51.70  Aligned_cols=81  Identities=22%  Similarity=0.301  Sum_probs=55.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      ++.+++|+|+++++|..+++.+...|++|+++.+++++.+.+.++   .+..   ...|..+..++...+.+...  +++
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            467999999999999999998888899999999988765554322   2321   12344444233333333221  368


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |.++.+.|.
T Consensus        90 d~vi~~ag~   98 (256)
T PRK06124         90 DILVNNVGA   98 (256)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.35  E-value=0.0019  Score=52.04  Aligned_cols=78  Identities=24%  Similarity=0.268  Sum_probs=52.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +.+++|+|+++++|.++++.+...|++|+++.+++...+... ++   +..   ...|..+.++....+.+..  .+++|
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID   86 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence            578999999999999999999889999999998754322222 32   322   1235555423333333322  13699


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      +++.++|
T Consensus        87 ~lv~nAg   93 (260)
T PRK12823         87 VLINNVG   93 (260)
T ss_pred             EEEECCc
Confidence            9999987

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.35  E-value=0.0023  Score=53.29  Aligned_cols=94  Identities=15%  Similarity=0.194  Sum_probs=61.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      +|+|+||+|-+|..+++.+...|.+|++++|+.++...+. ..+...+ .|..++.++.+.+.     ++|.|+++++..
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al~-----g~d~Vi~~~~~~   75 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSFK-----GVTAIIDASTSR   75 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHHC-----CCCEEEECCCCC
Confidence            6999999999999999998888999999999877665554 4455322 24343312333332     489999987631


Q ss_pred             -----h--------HHHHHHccccCC--EEEEEccc
Q 042426          162 -----M--------LDAVLLNMRICG--HIAVCGMI  182 (270)
Q Consensus       162 -----~--------~~~~~~~l~~~G--~~v~~g~~  182 (270)
                           .        ....++.++..|  +++.++..
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence                 0        123344444443  88887764

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.35  E-value=0.0012  Score=53.21  Aligned_cols=79  Identities=16%  Similarity=0.261  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hC-C-CceeecCCchhHHH---HHHhHcCCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FG-F-DDAFNYKEEPDLDA---ALNRCFPEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g-~-~~vi~~~~~~~~~~---~i~~~~~~~~  151 (270)
                      +|+.|||+||++|+|.+.++=...+|+++++.+.+.+..++..++   .| + ..+.|-++.++...   ++++.. |.+
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~-G~V  115 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV-GDV  115 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc-CCc
Confidence            589999999999999988877777799888888665533332222   24 2 24445555434443   333332 368


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |+++|.+|
T Consensus       116 ~ILVNNAG  123 (300)
T KOG1201|consen  116 DILVNNAG  123 (300)
T ss_pred             eEEEeccc
Confidence            99999998

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.34  E-value=0.0026  Score=55.05  Aligned_cols=75  Identities=25%  Similarity=0.426  Sum_probs=55.6

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEE
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      ...++.+++|+|+ |.+|..+++.++..|+ +|+++.++.++.+.+.+++|.. .++..   +..+.+.     ++|+||
T Consensus       176 ~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~---~l~~~l~-----~aDvVi  245 (417)
T TIGR01035       176 GSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFE---DLEEYLA-----EADIVI  245 (417)
T ss_pred             CCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH---HHHHHHh-----hCCEEE
Confidence            3456789999997 9999999999999994 8999999988766454477753 33221   3333332     499999


Q ss_pred             eCCCcc
Q 042426          156 ENVGGK  161 (270)
Q Consensus       156 d~~g~~  161 (270)
                      +|++.+
T Consensus       246 ~aT~s~  251 (417)
T TIGR01035       246 SSTGAP  251 (417)
T ss_pred             ECCCCC
Confidence            999864

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.34  E-value=0.0015  Score=53.18  Aligned_cols=82  Identities=12%  Similarity=0.177  Sum_probs=53.8

Q ss_pred             CCCCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhCCC--ceeecCCchhHHHHHHhHc--C
Q 042426           78 PKKGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSK---EKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCF--P  148 (270)
Q Consensus        78 ~~~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~---~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~--~  148 (270)
                      +-.+.+++|+|++  +++|.++++.+...|++|+++.+++   ++.+.+.++++..  ...|..+..+..+.+.+..  .
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            3356789999996  7999999999988999999887764   3344444344532  2234444423433333322  2


Q ss_pred             CCccEEEeCCC
Q 042426          149 EGIDIYFENVG  159 (270)
Q Consensus       149 ~~~d~v~d~~g  159 (270)
                      +.+|++++++|
T Consensus        87 g~iD~lv~nAG   97 (272)
T PRK08159         87 GKLDFVVHAIG   97 (272)
T ss_pred             CCCcEEEECCc
Confidence            36899999987

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.34  E-value=0.0016  Score=51.87  Aligned_cols=80  Identities=23%  Similarity=0.325  Sum_probs=54.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc-e--eecCCchhHHHHHHhHcC--CCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDD-A--FNYKEEPDLDAALNRCFP--EGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-v--i~~~~~~~~~~~i~~~~~--~~~d  152 (270)
                      +.+++|+|++|++|..+++.+...|.+|+++.+++++.+.+.+.   .+... .  .|..+...+.+.+.+...  +.+|
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALD   84 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999888899999999988775554322   23221 1  355544234343333211  2589


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      .++.++|.
T Consensus        85 ~vi~~ag~   92 (246)
T PRK05653         85 ILVNNAGI   92 (246)
T ss_pred             EEEECCCc
Confidence            99999864

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.33  E-value=0.0018  Score=52.13  Aligned_cols=80  Identities=16%  Similarity=0.222  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.++||+||++++|...++.+...|++|++++++ ++.+.+.+   +.+..   ...|..+.++....+.+..  .+++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            36799999999999999999999999999999877 33333332   22322   1234444423333333322  1368


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+++.+.|.
T Consensus        93 d~li~~ag~  101 (258)
T PRK06935         93 DILVNNAGT  101 (258)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK07791 short chain dehydrogenase; Provisional

Probab=97.33  E-value=0.0018  Score=53.12  Aligned_cols=81  Identities=17%  Similarity=0.230  Sum_probs=53.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHHHh---CCC---ceeecCCchhHHHHHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK---------EKVDLLKHKF---GFD---DAFNYKEEPDLDAALN  144 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~---------~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~  144 (270)
                      ++.+++|+||++++|.++++.+...|++|++++++.         ++.+.+.+++   +..   ...|..+.++..+.+.
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD   84 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence            567999999999999999998888999999987654         4433333233   322   1234554423333333


Q ss_pred             hHc--CCCccEEEeCCCc
Q 042426          145 RCF--PEGIDIYFENVGG  160 (270)
Q Consensus       145 ~~~--~~~~d~v~d~~g~  160 (270)
                      +..  .+.+|++++++|.
T Consensus        85 ~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         85 AAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHhcCCCCEEEECCCC
Confidence            322  1468999999873

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.33  E-value=0.0019  Score=52.17  Aligned_cols=80  Identities=11%  Similarity=0.202  Sum_probs=52.4

Q ss_pred             CCcEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCc--eeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASG--AVGQLVGQFVKLVGCYVVGSARSKE---KVDLLKHKFGFDD--AFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g--~vG~~ai~la~~~g~~v~~~~~~~~---~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .|.+++|+||++  ++|.++++.+...|++|+...+++.   ..+.+.++.|...  ..|..+.++....+.+...  +.
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467899999986  8999999888888999999887642   2333332334322  2455554344444433322  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        87 iDilVnnag   95 (260)
T PRK06603         87 FDFLLHGMA   95 (260)
T ss_pred             ccEEEEccc
Confidence            999999886

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.32  E-value=0.0022  Score=51.81  Aligned_cols=80  Identities=14%  Similarity=0.238  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH----hCCC---ceeecCCchhHHHHHHhHc--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHK----FGFD---DAFNYKEEPDLDAALNRCF--PE  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~i~~~~--~~  149 (270)
                      ++.+++|+||++++|.++++.+...|++|+.+.+ +.++.+.+.++    .+..   ...|..+.++..+.+.+..  .+
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4679999999999999999999899999988864 44444333212    2321   1235555423433333322  23


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      .+|++++++|
T Consensus        87 ~id~lv~nAg   96 (260)
T PRK08416         87 RVDFFISNAI   96 (260)
T ss_pred             CccEEEECcc
Confidence            6899999885

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=97.32  E-value=0.0016  Score=51.99  Aligned_cols=81  Identities=17%  Similarity=0.219  Sum_probs=53.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD-D--AFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .+.+++|+||+|++|..++..+...|++|++++++.++.....+.   .+.. .  ..|..+.+++.+.+.+...  +.+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            356899999999999999998888899999999986655443322   2221 1  1244443233333333221  258


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |.++.+.|.
T Consensus        85 d~vi~~ag~   93 (251)
T PRK12826         85 DILVANAGI   93 (251)
T ss_pred             CEEEECCCC
Confidence            999999864

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=97.31  E-value=0.0015  Score=53.02  Aligned_cols=81  Identities=23%  Similarity=0.394  Sum_probs=57.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CC------ceeecCCchhHH---HHHHhHc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG---FD------DAFNYKEEPDLD---AALNRCF  147 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g---~~------~vi~~~~~~~~~---~~i~~~~  147 (270)
                      .|..++|+|++.++|.+++..+...|++|+.+.+++++.+...+++.   ..      .+.|.++.++..   +...+..
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~   86 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF   86 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999988766654432   11      233444431222   2233333


Q ss_pred             CCCccEEEeCCCc
Q 042426          148 PEGIDIYFENVGG  160 (270)
Q Consensus       148 ~~~~d~v~d~~g~  160 (270)
                      .|+.|+.+++.|.
T Consensus        87 ~GkidiLvnnag~   99 (270)
T KOG0725|consen   87 FGKIDILVNNAGA   99 (270)
T ss_pred             CCCCCEEEEcCCc
Confidence            4579999998884

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=97.31  E-value=0.0013  Score=49.12  Aligned_cols=78  Identities=21%  Similarity=0.316  Sum_probs=51.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC--HHHHHHHHHHh---CCC-ce--eecCCchhHHHHHHhHc--CCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGC-YVVGSARS--KEKVDLLKHKF---GFD-DA--FNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~--~~~~~~~~~~~---g~~-~v--i~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      +++|+||++++|...++.+...|. +|+.+.++  .++.+.+.+++   +.. .+  .|..+.++....+.+..  .+.+
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~l   81 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPL   81 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            689999999999999988887776 78888887  45555443233   321 11  34444434444444433  1369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++|.+.|.
T Consensus        82 d~li~~ag~   90 (167)
T PF00106_consen   82 DILINNAGI   90 (167)
T ss_dssp             SEEEEECSC
T ss_pred             ccccccccc
Confidence            999999984

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.31  E-value=0.0045  Score=51.46  Aligned_cols=99  Identities=19%  Similarity=0.264  Sum_probs=68.6

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~  148 (270)
                      +...++++++||..|+  |.|..++.+++..+.  .|+++..+++-.+.+++   +.|.+++.....  +..+.+...  
T Consensus        74 ~~L~i~~g~~VLDIG~--GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g--D~~~~~~~~--  147 (322)
T PRK13943         74 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG--DGYYGVPEF--  147 (322)
T ss_pred             HhcCCCCCCEEEEEeC--CccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC--Chhhccccc--
Confidence            3456788999999995  479999999998764  69999999887666653   356554332222  333222211  


Q ss_pred             CCccEEEeCCCcc-hHHHHHHccccCCEEEE
Q 042426          149 EGIDIYFENVGGK-MLDAVLLNMRICGHIAV  178 (270)
Q Consensus       149 ~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~  178 (270)
                      +.||+|+.+.+.. .....++.|+++|+++.
T Consensus       148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv  178 (322)
T PRK13943        148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIV  178 (322)
T ss_pred             CCccEEEECCchHHhHHHHHHhcCCCCEEEE
Confidence            2599999987753 44567889999999876

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=97.31  E-value=0.0026  Score=51.48  Aligned_cols=81  Identities=22%  Similarity=0.274  Sum_probs=54.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .+.+++|+|+++++|..++..+...|++|+++.+++++.+.+.+.+   +..   ...|..+..+....+.+...  +++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            4578999999999999999888889999999998887665544233   322   12344443233333333221  368


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |.++.+.|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999999973

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.30  E-value=0.0022  Score=51.75  Aligned_cols=104  Identities=12%  Similarity=0.082  Sum_probs=66.1

Q ss_pred             CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHhCCCce--eecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSKEK---VDLLKHKFGFDDA--FNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~~~---~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~--~~~  150 (270)
                      .|.+++|+||+  +++|.++++.+...|++|+++.++.+.   .+.+.++++....  .|..+.++..+.+.+..  .+.
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            36789999997  499999999998899999999887543   3333334443222  34444423333333322  146


Q ss_pred             ccEEEeCCCcc---------------h---------------HHHHHHccccCCEEEEEcccc
Q 042426          151 IDIYFENVGGK---------------M---------------LDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       151 ~d~v~d~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +|++++++|..               .               .+..+..++.+|+++.+++..
T Consensus        89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~  151 (258)
T PRK07533         89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG  151 (258)
T ss_pred             CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence            89999998731               0               233555666678888876643

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.002  Score=51.80  Aligned_cols=80  Identities=19%  Similarity=0.187  Sum_probs=52.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      +.+++|+|+++++|.++++.+...|++|++++++.+ ..+.+.++   .+..   ...|..++.+..+.+.+..  .+.+
T Consensus         8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   87 (254)
T PRK06114          8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGAL   87 (254)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            568999999999999999999999999999987643 22322212   2321   1234444423333333322  2368


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+++++.|.
T Consensus        88 d~li~~ag~   96 (254)
T PRK06114         88 TLAVNAAGI   96 (254)
T ss_pred             CEEEECCCC
Confidence            999999983

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.0049  Score=49.43  Aligned_cols=105  Identities=20%  Similarity=0.194  Sum_probs=64.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHh---CCC---ceeecCCchh---HHHHHHhH---
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKHKF---GFD---DAFNYKEEPD---LDAALNRC---  146 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~~~---g~~---~vi~~~~~~~---~~~~i~~~---  146 (270)
                      .+.+++|+|+++++|.++++.+...|++|++.. ++.++.+.+.+++   +..   ...|..+..+   +.+.+.+.   
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            357899999999999999999999999998875 4545444332222   221   1123333212   22222221   


Q ss_pred             -cC-CCccEEEeCCCcc-----------hH---------------HHHHHccccCCEEEEEccccc
Q 042426          147 -FP-EGIDIYFENVGGK-----------ML---------------DAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       147 -~~-~~~d~v~d~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  184 (270)
                       .. +++|++++++|..           .+               +.++..+...|+++.+++...
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence             12 2699999998731           01               234555666799999887654

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0017  Score=52.14  Aligned_cols=75  Identities=19%  Similarity=0.296  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C-ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--D-DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      .+.+++|+|++|++|..+++.+...|++|++++++.++    . ..+.  . ...|..+..++.+.+.+..  .+.+|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            36789999999999999999998899999999987654    1 2222  1 2235444423333333321  1368999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      |.+.|
T Consensus        80 i~~ag   84 (252)
T PRK07856         80 VNNAG   84 (252)
T ss_pred             EECCC
Confidence            99987

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0038  Score=49.75  Aligned_cols=77  Identities=22%  Similarity=0.316  Sum_probs=52.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CC-ceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-FD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .+++|+||+|++|..++..+...|++|+++++++++.+.+.+... .. ...|..+.+++.+.+.+. ....|.++.++|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~d~~i~~ag   80 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQL-PFIPELWIFNAG   80 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhc-ccCCCEEEEcCc
Confidence            469999999999999888888889999999999888777652221 11 224555543444444433 223577666665

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=97.27  E-value=0.0018  Score=52.06  Aligned_cols=80  Identities=20%  Similarity=0.311  Sum_probs=54.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +.+++|+|+++++|..++..+...|++|+.++++.++.+.+.++   .+..   ...|..+.++..+.+.+..  .+++|
T Consensus        11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   90 (255)
T PRK06113         11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVD   90 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            67899999999999999998888999999999887766554322   2322   1245555423333333321  13689


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      +++.+.|.
T Consensus        91 ~li~~ag~   98 (255)
T PRK06113         91 ILVNNAGG   98 (255)
T ss_pred             EEEECCCC
Confidence            99999873

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.27  E-value=0.005  Score=45.40  Aligned_cols=92  Identities=22%  Similarity=0.270  Sum_probs=62.4

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      ..-.|.+++|.|- |-+|.-.++.++.+|++|+++..++-+.-.+. .-|.. +.      ...+.+.     ..|+++.
T Consensus        19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~~-----~adi~vt   84 (162)
T PF00670_consen   19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEALR-----DADIFVT   84 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHTT-----T-SEEEE
T ss_pred             eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHHh-----hCCEEEE
Confidence            3456889999997 99999999999999999999999887666555 55653 22      3333333     3899999


Q ss_pred             CCCcc--hHHHHHHccccCCEEEEEccc
Q 042426          157 NVGGK--MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       157 ~~g~~--~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      ++|..  .....+..|+++..+..+|..
T Consensus        85 aTG~~~vi~~e~~~~mkdgail~n~Gh~  112 (162)
T PF00670_consen   85 ATGNKDVITGEHFRQMKDGAILANAGHF  112 (162)
T ss_dssp             -SSSSSSB-HHHHHHS-TTEEEEESSSS
T ss_pred             CCCCccccCHHHHHHhcCCeEEeccCcC
Confidence            99985  346888889998888887763

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.005  Score=50.65  Aligned_cols=105  Identities=16%  Similarity=0.186  Sum_probs=64.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      .+.++||+|++|++|..+++.+...|++|+++.++.. ..+.+.+.   .+..   ...|..+...+.+.+.+..  .++
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~  124 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR  124 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3678999999999999999988888999999987643 22222212   2322   1234444323333333221  136


Q ss_pred             ccEEEeCCCcc----h-----------------------HHHHHHccccCCEEEEEccccc
Q 042426          151 IDIYFENVGGK----M-----------------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       151 ~d~v~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      +|+++.++|..    .                       ++.++..+++.|+++.++....
T Consensus       125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~  185 (290)
T PRK06701        125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG  185 (290)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence            89999988731    0                       1223444566789998876543

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=97.25  E-value=0.0025  Score=47.89  Aligned_cols=99  Identities=21%  Similarity=0.218  Sum_probs=65.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee-cCC---------------chhHHHHHHh
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN-YKE---------------EPDLDAALNR  145 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~-~~~---------------~~~~~~~i~~  145 (270)
                      -+|+|+|+ |.+|+.|+++++.+|++++.....+++.+... ..+...+.. +.+               ...+...+.+
T Consensus        21 ~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   21 AKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             -EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             eEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            67999997 99999999999999999999999988888877 666532221 000               0022222322


Q ss_pred             HcCCCccEEEeCCC--c---c--hHHHHHHccccCCEEEEEcccc
Q 042426          146 CFPEGIDIYFENVG--G---K--MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       146 ~~~~~~d~v~d~~g--~---~--~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      ... .+|+++-+.-  +   +  ..+..++.|+++..++.+....
T Consensus        99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~  142 (168)
T PF01262_consen   99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ  142 (168)
T ss_dssp             HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred             HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence            211 2799885432  1   1  4578899999999999887643

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=97.24  E-value=0.0081  Score=47.85  Aligned_cols=97  Identities=24%  Similarity=0.305  Sum_probs=66.0

Q ss_pred             cCC--chHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHhCCC-ceeecCCchh---HHHHHHhHcCCCccEEEeC
Q 042426           88 AAS--GAVGQLVGQFVKLVGCYVVGSARSKEK----VDLLKHKFGFD-DAFNYKEEPD---LDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        88 ga~--g~vG~~ai~la~~~g~~v~~~~~~~~~----~~~~~~~~g~~-~vi~~~~~~~---~~~~i~~~~~~~~d~v~d~  157 (270)
                      |++  +++|.++++.+...|++|+++.++.++    .+.+.++.+.. ...|..++++   +.+.+.+..+|++|+++++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            455  899999999999999999999999887    45555456654 2234444423   3333444444679999987


Q ss_pred             CCcch------------------------------HHHHHHccccCCEEEEEccccc
Q 042426          158 VGGKM------------------------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       158 ~g~~~------------------------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      .+...                              .+.+.+.++++|.++.++....
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~  137 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAA  137 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGG
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhh
Confidence            75310                              2456667888999998876543

...

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.0023  Score=52.00  Aligned_cols=78  Identities=19%  Similarity=0.202  Sum_probs=52.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeecCCchhHHHHHHhHc--CCCccEE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD-D--AFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      +++|+|++|++|..+++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+..++.+.+....  .+++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999988888999999999887765543222   222 1  124444323333332221  1368999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      +.++|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            999884

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=97.22  E-value=0.0032  Score=54.11  Aligned_cols=75  Identities=28%  Similarity=0.344  Sum_probs=50.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+...+..+..   ...|..+.++    +.+.. +++|++++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~----v~~~l-~~IDiLIn  251 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAA----LAELL-EKVDILII  251 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHH----HHHHh-CCCCEEEE
Confidence            3679999999999999999988889999999998876654322111111   1134444312    22222 25999999


Q ss_pred             CCC
Q 042426          157 NVG  159 (270)
Q Consensus       157 ~~g  159 (270)
                      ++|
T Consensus       252 nAG  254 (406)
T PRK07424        252 NHG  254 (406)
T ss_pred             CCC
Confidence            887

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.22  E-value=0.003  Score=50.82  Aligned_cols=79  Identities=13%  Similarity=0.148  Sum_probs=52.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEe
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFE  156 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d  156 (270)
                      +.+++|+|+++++|..+++.+...|++|+++.++. +..+.++ ..+.. ...|..+..+..+.+.+..  .+++|+++.
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~   85 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN   85 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57899999999999999999988999998876543 3444444 32332 2235555423433333322  236899999


Q ss_pred             CCCc
Q 042426          157 NVGG  160 (270)
Q Consensus       157 ~~g~  160 (270)
                      +.|.
T Consensus        86 ~ag~   89 (255)
T PRK06463         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            9873

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.21  E-value=0.0081  Score=48.04  Aligned_cols=103  Identities=17%  Similarity=0.221  Sum_probs=63.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHH----HHHHHhCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVD----LLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~----~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      +.++||+|++|++|..+++.+...|++++...++ .++..    .++ +.+..   ...|..+..+....+.+...  ++
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999888899998877643 22222    222 23322   11344443233333333211  36


Q ss_pred             ccEEEeCCCcc-----------h---------------HHHHHHccccCCEEEEEccccc
Q 042426          151 IDIYFENVGGK-----------M---------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       151 ~d~v~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      +|.+|.+.|..           .               .+.+.+.++..|+++.+++...
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG  144 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence            89999999830           0               2334455567789998887554

>PLN02476 O-methyltransferase

Probab=97.21  E-value=0.0066  Score=49.16  Aligned_cols=105  Identities=16%  Similarity=0.146  Sum_probs=73.0

Q ss_pred             hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhH
Q 042426           72 LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        72 l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~  146 (270)
                      +..+.+..+..+||=+|  +++|..++.+++.++  .+|+.+..+++..+.+++   +.|..+-+..... +..+.+.+.
T Consensus       110 L~~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l  186 (278)
T PLN02476        110 LAMLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSM  186 (278)
T ss_pred             HHHHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHH
Confidence            33445667788999998  788999999998774  479999999887777763   3466433444333 444544443


Q ss_pred             c----CCCccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426          147 F----PEGIDIYFENVGG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       147 ~----~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                      .    .+.||+||=-...    ..++.++++|++||.++.=
T Consensus       187 ~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D  227 (278)
T PLN02476        187 IQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD  227 (278)
T ss_pred             HhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence            1    2379998755543    2688899999999998753

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.21  E-value=0.0032  Score=50.96  Aligned_cols=80  Identities=15%  Similarity=0.265  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCC--ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASG--AVGQLVGQFVKLVGCYVVGSARSKE---KVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g--~vG~~ai~la~~~g~~v~~~~~~~~---~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.+++|+||++  ++|.++++.+...|++|++..+++.   ..+.+.++.+..  ...|..+.+++.+.+.+...  +.
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            467899999975  8999999998889999998887632   223332122221  22355554344444443322  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        85 iD~linnAg   93 (262)
T PRK07984         85 FDGFVHSIG   93 (262)
T ss_pred             CCEEEECCc
Confidence            899999997

>PRK08226 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0033  Score=50.78  Aligned_cols=80  Identities=20%  Similarity=0.263  Sum_probs=52.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HhCCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH--KFGFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~--~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      ++.+++|+|++|++|..+++.+...|++|+++.++.+..+...+  ..+..   ...|..+..+....+.+..  .+.+|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            35789999999999999999998899999999988654333321  12322   1234444323333332221  23689


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      +++.+.|
T Consensus        85 ~vi~~ag   91 (263)
T PRK08226         85 ILVNNAG   91 (263)
T ss_pred             EEEECCC
Confidence            9999888

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.20  E-value=0.0027  Score=51.12  Aligned_cols=79  Identities=15%  Similarity=0.123  Sum_probs=52.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCC--c--eeecCCchhHHHHHHhHc--CCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK----FGFD--D--AFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~----~g~~--~--vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      +.+++|+|++|++|..+++.+...|++|+.++++..+.+.+.++    .+..  +  ..|..+..+....+.+..  .++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999988899999999887765444322    2211  1  124444323333333321  136


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|+++++.|
T Consensus        82 id~vv~~ag   90 (259)
T PRK12384         82 VDLLVYNAG   90 (259)
T ss_pred             CCEEEECCC
Confidence            899999987

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.20  E-value=0.0028  Score=50.70  Aligned_cols=79  Identities=16%  Similarity=0.237  Sum_probs=53.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD-D--AFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +.++||+||+|++|..+++.+...|++|++++++.++.+.+.+.+   +.. .  ..|..+..+..+.+....  .+++|
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d   82 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD   82 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999889999999998887765554222   221 1  234444323333333222  13689


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      +++.+.|
T Consensus        83 ~vi~~ag   89 (250)
T TIGR03206        83 VLVNNAG   89 (250)
T ss_pred             EEEECCC
Confidence            9999997

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.19  E-value=0.0025  Score=51.57  Aligned_cols=81  Identities=6%  Similarity=0.120  Sum_probs=51.7

Q ss_pred             CCcEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCC--ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAA--SGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK---HKFGFD--DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga--~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~---~~~g~~--~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      ++.+++|+||  ++++|.+.++.+...|++|+++.+.+...+.++   ++.+..  ...|..+.++..+.+.+..  .++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4578999996  579999999999889999998876543333332   122322  2234555434444443332  236


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus        85 iD~lVnnAG~   94 (261)
T PRK08690         85 LDGLVHSIGF   94 (261)
T ss_pred             CcEEEECCcc
Confidence            9999999873

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.18  E-value=0.0035  Score=50.79  Aligned_cols=82  Identities=18%  Similarity=0.132  Sum_probs=59.2

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-ee-------ecCCchhHHHHHHhHc--C
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AF-------NYKEEPDLDAALNRCF--P  148 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi-------~~~~~~~~~~~i~~~~--~  148 (270)
                      ++--+|+|.|++.++|++....++..|++|.++.++.+++..+++.++... +.       |-.+.+.....++..-  .
T Consensus        31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~  110 (331)
T KOG1210|consen   31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE  110 (331)
T ss_pred             CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence            444689999999999999999999999999999999999998887776531 11       2222211222333321  1


Q ss_pred             CCccEEEeCCCc
Q 042426          149 EGIDIYFENVGG  160 (270)
Q Consensus       149 ~~~d~v~d~~g~  160 (270)
                      +.+|.+|.|+|.
T Consensus       111 ~~~d~l~~cAG~  122 (331)
T KOG1210|consen  111 GPIDNLFCCAGV  122 (331)
T ss_pred             CCcceEEEecCc
Confidence            368999999994

>PRK06398 aldose dehydrogenase; Validated

Probab=97.18  E-value=0.00088  Score=54.05  Aligned_cols=74  Identities=16%  Similarity=0.181  Sum_probs=50.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHc--CCCccEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCF--PEGIDIYFENV  158 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~--~~~~d~v~d~~  158 (270)
                      |.+++|+|+++++|..+++.+...|++|+++++++.+...+.     ....|..++.++.+.+.+..  .+.+|+++++.
T Consensus         6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~A   80 (258)
T PRK06398          6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNNA   80 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            578999999999999999999999999999997754322111     11234544423333333322  13689999988


Q ss_pred             C
Q 042426          159 G  159 (270)
Q Consensus       159 g  159 (270)
                      |
T Consensus        81 g   81 (258)
T PRK06398         81 G   81 (258)
T ss_pred             C
Confidence            7

>PRK05599 hypothetical protein; Provisional

Probab=97.18  E-value=0.0024  Score=51.12  Aligned_cols=77  Identities=14%  Similarity=0.150  Sum_probs=51.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC----ceeecCCchhHHHHHHhHc--CCCccE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD----DAFNYKEEPDLDAALNRCF--PEGIDI  153 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~----~vi~~~~~~~~~~~i~~~~--~~~~d~  153 (270)
                      +++|+|+++++|.+.++.+. .|.+|+++.+++++.+.+.+++   |..    ...|..+.++..+.+.+..  .+++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            58999999999998888776 5999999999988777664333   322    1234444423333333322  246899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      ++.+.|.
T Consensus        81 lv~nag~   87 (246)
T PRK05599         81 AVVAFGI   87 (246)
T ss_pred             EEEecCc
Confidence            9998873

>PRK07069 short chain dehydrogenase; Validated

Probab=97.17  E-value=0.0024  Score=51.14  Aligned_cols=76  Identities=16%  Similarity=0.298  Sum_probs=51.4

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHhC----CC----ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKHKFG----FD----DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~~~g----~~----~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      ++|+|++|++|..+++.+...|++|+++.++ .++.+.+.+++.    ..    ...|..+.+++.+.+.+..  .+++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999988889999999987 555554443332    11    1235555424444333322  13689


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      +++.++|
T Consensus        82 ~vi~~ag   88 (251)
T PRK07069         82 VLVNNAG   88 (251)
T ss_pred             EEEECCC
Confidence            9999987

>PRK12743 oxidoreductase; Provisional

Probab=97.17  E-value=0.0033  Score=50.63  Aligned_cols=80  Identities=16%  Similarity=0.285  Sum_probs=51.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HhCCC-c--eeecCCchhHHHHHHhHcC--CCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKH---KFGFD-D--AFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      +.+++|+||++++|..+++.+...|++|+.+.+ +.++.+.+.+   ..+.. +  ..|..+.++....+.+...  +.+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999988764 4444433322   23432 1  2355544233333332211  358


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+++.+.|.
T Consensus        82 d~li~~ag~   90 (256)
T PRK12743         82 DVLVNNAGA   90 (256)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.17  E-value=0.0031  Score=49.34  Aligned_cols=100  Identities=19%  Similarity=0.220  Sum_probs=66.7

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~  148 (270)
                      ....++++++||-+|  +|.|..+..+++..+  .+|+.+..+++-.+.+++.+   |..++ ..... +......  ..
T Consensus        70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v-~~~~g-d~~~~~~--~~  143 (212)
T PRK13942         70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNV-EVIVG-DGTLGYE--EN  143 (212)
T ss_pred             HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC-CcccCCC--cC
Confidence            456788999999998  677888888888775  59999999988777776433   43322 11111 1111110  11


Q ss_pred             CCccEEEeCCCc-chHHHHHHccccCCEEEEE
Q 042426          149 EGIDIYFENVGG-KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       149 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  179 (270)
                      +.||+|+-.... .......+.|+++|+++..
T Consensus       144 ~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        144 APYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             CCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            369998754433 4556788899999998874

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.16  E-value=0.0026  Score=51.39  Aligned_cols=81  Identities=15%  Similarity=0.243  Sum_probs=52.6

Q ss_pred             CCcEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAA--SGAVGQLVGQFVKLVGCYVVGSARS---KEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga--~g~vG~~ai~la~~~g~~v~~~~~~---~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      ++.+++|+||  ++++|.++++.+...|++|+++.+.   .++.+.+.++++..  ...|..++++..+.+.+...  ++
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            3678999996  5799999999888899999987643   33444443344432  22455554344444443322  47


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus        85 iD~lvnnAG~   94 (260)
T PRK06997         85 LDGLVHSIGF   94 (260)
T ss_pred             CcEEEEcccc
Confidence            9999998863

>PRK09135 pteridine reductase; Provisional

Probab=97.15  E-value=0.0035  Score=50.01  Aligned_cols=80  Identities=11%  Similarity=0.167  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHh----CCC---ceeecCCchhHHHHHHhHc--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKHKF----GFD---DAFNYKEEPDLDAALNRCF--PE  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~--~~  149 (270)
                      .+.+++|+|++|++|..+++.+...|++|++++++ .++.+.+.+.+    +..   ...|..+..+....+.+..  -+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            34689999999999999999888889999999975 33333332122    111   1235554423333333221  13


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|++|.++|
T Consensus        85 ~~d~vi~~ag   94 (249)
T PRK09135         85 RLDALVNNAS   94 (249)
T ss_pred             CCCEEEECCC
Confidence            5899999997

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.15  E-value=0.0028  Score=49.27  Aligned_cols=111  Identities=19%  Similarity=0.238  Sum_probs=68.8

Q ss_pred             ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCce-eec
Q 042426           60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKH---KFGFDDA-FNY  133 (270)
Q Consensus        60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~v-i~~  133 (270)
                      .+..+...|. ++ +...+++|++||-+|  +|.|..++-+++..|-  .|+.+.+.++-.+.+++   .++.+++ +..
T Consensus        54 ~is~P~~~a~-~l-~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~  129 (209)
T PF01135_consen   54 TISAPSMVAR-ML-EALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVV  129 (209)
T ss_dssp             EE--HHHHHH-HH-HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEE
T ss_pred             echHHHHHHH-HH-HHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEE
Confidence            3333444443 33 556799999999999  7889999999998875  68999888765555443   4555433 222


Q ss_pred             CCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEE
Q 042426          134 KEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~  179 (270)
                      .+.   ...+.+.  +.||.|+-+.+-+ .-...++.|+++|++|..
T Consensus       130 gdg---~~g~~~~--apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  130 GDG---SEGWPEE--APFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             S-G---GGTTGGG---SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             cch---hhccccC--CCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            221   1111111  2699999887765 346788899999999973

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK06940 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.012  Score=48.03  Aligned_cols=100  Identities=20%  Similarity=0.204  Sum_probs=63.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc-CCCccEE
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF-PEGIDIY  154 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~-~~~~d~v  154 (270)
                      .+++|.|+ |++|.++++.+. .|++|+++++++++.+.+.+++   +..   ...|..+.++..+.+.+.. .+++|++
T Consensus         3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            57899997 799999998885 7999999999877665554333   322   1235555433444433321 2469999


Q ss_pred             EeCCCcc----h---------------HHHHHHccccCCEEEEEcccc
Q 042426          155 FENVGGK----M---------------LDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       155 ~d~~g~~----~---------------~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      ++++|..    .               ++.....+..+|+++.+++..
T Consensus        81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~  128 (275)
T PRK06940         81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS  128 (275)
T ss_pred             EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence            9999841    1               233444555667777665543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.14  E-value=0.0035  Score=50.33  Aligned_cols=79  Identities=22%  Similarity=0.302  Sum_probs=50.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCC-c--eeecCCchhHHHHHHhHc--CCCccE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE--KVDLLKHKFGFD-D--AFNYKEEPDLDAALNRCF--PEGIDI  153 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~--~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~--~~~~d~  153 (270)
                      |.+++|+|+++++|.++++.+...|++|+.+.++..  ..+.++ +.+.. .  ..|..+.++..+.+.+..  .+++|+
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            578999999999999999999999999998765432  223333 33322 1  134444323333333321  136899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      +++++|.
T Consensus        89 li~~Ag~   95 (253)
T PRK08993         89 LVNNAGL   95 (253)
T ss_pred             EEECCCC
Confidence            9999973

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.14  E-value=0.0041  Score=49.82  Aligned_cols=79  Identities=18%  Similarity=0.214  Sum_probs=51.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCC---ceeecCCchhHHHHHHh---HcCCCccE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNR---CFPEGIDI  153 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~---~~~~~~d~  153 (270)
                      +.+++|+||+|++|..++..+...|++|+.+.+ +.++.+.+.++++..   ...|..+.+++.+.+.+   ..++++|+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~   84 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT   84 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence            468999999999999999998889999988654 455555554345422   11344444233333333   22224899


Q ss_pred             EEeCCC
Q 042426          154 YFENVG  159 (270)
Q Consensus       154 v~d~~g  159 (270)
                      ++.+.|
T Consensus        85 li~~ag   90 (253)
T PRK08642         85 VVNNAL   90 (253)
T ss_pred             EEECCC
Confidence            999875

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=97.13  E-value=0.0027  Score=58.45  Aligned_cols=80  Identities=20%  Similarity=0.296  Sum_probs=56.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC----ceeecCCchhHHHHHHhHc--CCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD----DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~----~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      +.++||+|++|++|.++++.+...|++|++++++.++.+.+.+++    +..    ...|..+..++.+.+.+..  .++
T Consensus       414 gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~  493 (676)
T TIGR02632       414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGG  493 (676)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            678999999999999999999889999999999887766554333    221    1234444423444444332  236


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus       494 iDilV~nAG~  503 (676)
T TIGR02632       494 VDIVVNNAGI  503 (676)
T ss_pred             CcEEEECCCC
Confidence            9999999983

>PRK08303 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.0041  Score=51.55  Aligned_cols=80  Identities=19%  Similarity=0.236  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHH---HhCCC---ceeecCCchhHHHHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK----------EKVDLLKH---KFGFD---DAFNYKEEPDLDAAL  143 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~----------~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i  143 (270)
                      .+.+++|+|+++++|+++++.+...|++|++++++.          ++.+.+.+   ..|..   ...|..+..+....+
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            367999999999999999999999999999998763          23333321   22321   123444442333333


Q ss_pred             HhHc--CCCccEEEeCC-C
Q 042426          144 NRCF--PEGIDIYFENV-G  159 (270)
Q Consensus       144 ~~~~--~~~~d~v~d~~-g  159 (270)
                      .+..  .+++|++++++ |
T Consensus        87 ~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHcCCccEEEECCcc
Confidence            3322  13689999988 5

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=97.12  E-value=0.0083  Score=48.01  Aligned_cols=74  Identities=18%  Similarity=0.288  Sum_probs=50.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIYF  155 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v~  155 (270)
                      +.++||+|++|++|..+++.+...|++|+++.++.     .. ..+..   ...|..+.+.+.+.+.+...  +.+|+++
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLV   81 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            57899999999999999999888999999999775     22 22221   12344444234443333221  3589999


Q ss_pred             eCCCc
Q 042426          156 ENVGG  160 (270)
Q Consensus       156 d~~g~  160 (270)
                      .+.|.
T Consensus        82 ~~ag~   86 (252)
T PRK08220         82 NAAGI   86 (252)
T ss_pred             ECCCc
Confidence            99874

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.12  E-value=0.0054  Score=50.09  Aligned_cols=93  Identities=18%  Similarity=0.166  Sum_probs=61.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      .+.+++|+|+ |++|.+++..+...| .+|+++.|+.++.+.+.++++....+.. .. +..+.+     ..+|+|++|+
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~-----~~~DivInaT  193 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEEL-----ADFDLIINAT  193 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhcc-----ccCCEEEECC
Confidence            4678999997 999999999999999 5999999999888777655543210111 10 111111     2489999998


Q ss_pred             CcchH------HHHHHccccCCEEEEEc
Q 042426          159 GGKML------DAVLLNMRICGHIAVCG  180 (270)
Q Consensus       159 g~~~~------~~~~~~l~~~G~~v~~g  180 (270)
                      .....      ......+.++..++.+-
T Consensus       194 p~g~~~~~~~~~~~~~~l~~~~~v~Div  221 (278)
T PRK00258        194 SAGMSGELPLPPLPLSLLRPGTIVYDMI  221 (278)
T ss_pred             cCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            74321      12235566666666653

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=97.11  E-value=0.008  Score=45.91  Aligned_cols=96  Identities=13%  Similarity=0.121  Sum_probs=64.2

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCCcc
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      .++++.+||-.|  +|.|..++.+++.. +.+|++++.+++..+.+++   +.+.+. +..... +..+ +..  .+.||
T Consensus        42 ~l~~g~~VLDiG--cGtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~fD  114 (187)
T PRK00107         42 YLPGGERVLDVG--SGAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKFD  114 (187)
T ss_pred             hcCCCCeEEEEc--CCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCcc
Confidence            355688999998  56677777777644 5799999999887766653   344443 333332 3332 211  23699


Q ss_pred             EEEeCCCc---chHHHHHHccccCCEEEEE
Q 042426          153 IYFENVGG---KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       153 ~v~d~~g~---~~~~~~~~~l~~~G~~v~~  179 (270)
                      +|+-....   ..+..+.++|+++|+++.+
T Consensus       115 lV~~~~~~~~~~~l~~~~~~LkpGG~lv~~  144 (187)
T PRK00107        115 VVTSRAVASLSDLVELCLPLLKPGGRFLAL  144 (187)
T ss_pred             EEEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence            99875433   3677889999999999976

>PRK07775 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0055  Score=49.88  Aligned_cols=80  Identities=19%  Similarity=0.206  Sum_probs=53.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDD---AFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      ..+++|+||+|++|..+++.+...|++|++++++.++.+.+.++   .+...   ..|..+..+..+.+.+..  .+++|
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   89 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE   89 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            35899999999999999998888899999999887665544322   23221   124444423333333321  13689


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      ++|.++|.
T Consensus        90 ~vi~~Ag~   97 (274)
T PRK07775         90 VLVSGAGD   97 (274)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.10  E-value=0.0045  Score=49.46  Aligned_cols=83  Identities=16%  Similarity=0.171  Sum_probs=53.8

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC--ce--eecC--CchhHHHHHHhHcC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD--DA--FNYK--EEPDLDAALNRCFP  148 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~v--i~~~--~~~~~~~~i~~~~~  148 (270)
                      ..++.+++|+|++|++|...++.+...|++|++++++.++.+.+.+++   +..  .+  .|..  +.+++.+.+.....
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            446789999999999999999988888999999999887655443232   221  11  2222  22133332222221


Q ss_pred             --CCccEEEeCCCc
Q 042426          149 --EGIDIYFENVGG  160 (270)
Q Consensus       149 --~~~d~v~d~~g~  160 (270)
                        +.+|.++.+++.
T Consensus        89 ~~~~id~vi~~Ag~  102 (247)
T PRK08945         89 QFGRLDGVLHNAGL  102 (247)
T ss_pred             HhCCCCEEEECCcc
Confidence              258999998863

>PRK07577 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0024  Score=50.54  Aligned_cols=74  Identities=26%  Similarity=0.264  Sum_probs=51.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCC-CccEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPE-GIDIYFENV  158 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~  158 (270)
                      +.+++|+|++|++|..+++.+...|++|+++.++.++ .     .... ...|..+.+++.+.+.+.... ++|+++.+.
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV   76 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence            4689999999999999999998999999999987654 1     1111 234555542344444433322 689999998


Q ss_pred             Cc
Q 042426          159 GG  160 (270)
Q Consensus       159 g~  160 (270)
                      |.
T Consensus        77 g~   78 (234)
T PRK07577         77 GI   78 (234)
T ss_pred             CC
Confidence            74

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.004  Score=50.69  Aligned_cols=81  Identities=21%  Similarity=0.317  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-------HHHHHH---HhCCC---ceeecCCchhHHHHHHhH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-------VDLLKH---KFGFD---DAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-------~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~  146 (270)
                      .+.+++|+||+|++|..+++.+...|++|++++++.+.       .+.+.+   ..+..   ...|..+.....+.+.+.
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            35689999999999999999888899999999986532       221111   22332   123555442333333332


Q ss_pred             cC--CCccEEEeCCCc
Q 042426          147 FP--EGIDIYFENVGG  160 (270)
Q Consensus       147 ~~--~~~d~v~d~~g~  160 (270)
                      ..  +.+|++|+++|.
T Consensus        85 ~~~~g~id~li~~ag~  100 (273)
T PRK08278         85 VERFGGIDICVNNASA  100 (273)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            11  368999999873

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=97.08  E-value=0.005  Score=49.31  Aligned_cols=79  Identities=16%  Similarity=0.199  Sum_probs=53.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCccE
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGIDI  153 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~  153 (270)
                      .++||+|++|++|..++..+...|++|++++++.++.+.+.+++   +..   ...|..+..++...+.+..  .++.|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            47999999999999999988888999999999887776665332   221   1235554423333333321  125899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      ++.+.+.
T Consensus        82 vi~~a~~   88 (255)
T TIGR01963        82 LVNNAGI   88 (255)
T ss_pred             EEECCCC
Confidence            9988863

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05855 short chain dehydrogenase; Validated

Probab=97.07  E-value=0.0029  Score=57.18  Aligned_cols=80  Identities=19%  Similarity=0.164  Sum_probs=55.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +.+++|+||+|++|..+++.+...|++|++++++.++.+.+.++.   |..   ...|..+.+...+.+.+..  .+.+|
T Consensus       315 ~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  394 (582)
T PRK05855        315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPD  394 (582)
T ss_pred             CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCc
Confidence            568999999999999999988889999999999887766554222   321   1235555423333333322  23689


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      ++++++|.
T Consensus       395 ~lv~~Ag~  402 (582)
T PRK05855        395 IVVNNAGI  402 (582)
T ss_pred             EEEECCcc
Confidence            99999984

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.07  E-value=0.0051  Score=49.20  Aligned_cols=81  Identities=15%  Similarity=0.233  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      ++.+++|+||+|++|+.++..+...|++|++. .++.++.+.+.++   .+..   ...|..+..+....+.+..  .++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35689999999999999999999999998764 5565554443322   2332   1134444323333333221  136


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|+++.+.|.
T Consensus        83 id~vi~~ag~   92 (250)
T PRK08063         83 LDVFVNNAAS   92 (250)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=97.07  E-value=0.0072  Score=49.98  Aligned_cols=38  Identities=8%  Similarity=0.239  Sum_probs=32.1

Q ss_pred             CCcEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 042426           80 KGEYVYVSAA--SGAVGQLVGQFVKLVGCYVVGSARSKEKV  118 (270)
Q Consensus        80 ~g~~vlI~ga--~g~vG~~ai~la~~~g~~v~~~~~~~~~~  118 (270)
                      .|.++||+|+  ++|+|.++++.+...|++|++ ++..+++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            4789999999  799999999999999999988 5454443

>PRK08264 short chain dehydrogenase; Validated

Probab=97.07  E-value=0.004  Score=49.43  Aligned_cols=75  Identities=24%  Similarity=0.316  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC-c--eeecCCchhHHHHHHhHcCCCccEEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD-D--AFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      .+.+++|+||+|++|..+++.+...|+ +|+++.++.++.+.    .+.. .  ..|..+.+++.+.+.+.  +.+|+++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEE
Confidence            356899999999999999999999999 99999988765442    2221 1  23444442333333322  2489999


Q ss_pred             eCCCc
Q 042426          156 ENVGG  160 (270)
Q Consensus       156 d~~g~  160 (270)
                      .+.|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            99875

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.06  E-value=0.007  Score=47.07  Aligned_cols=101  Identities=14%  Similarity=0.151  Sum_probs=65.9

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~  148 (270)
                      +...++++++||-.|  +|.|..++.+++..+  .+|+.+..+++-.+.+++.   .+....+..... +..+.+..  .
T Consensus        66 ~~l~~~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-d~~~~~~~--~  140 (205)
T PRK13944         66 ELIEPRPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-DGKRGLEK--H  140 (205)
T ss_pred             HhcCCCCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-CcccCCcc--C
Confidence            445678899999998  677888888888764  5999999998877666533   343211111111 22211111  1


Q ss_pred             CCccEEEeCCCc-chHHHHHHccccCCEEEEE
Q 042426          149 EGIDIYFENVGG-KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       149 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  179 (270)
                      +.||.|+-+... .......+.|+++|+++..
T Consensus       141 ~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        141 APFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             CCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence            369998876554 3456778899999998763

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.06  E-value=0.004  Score=49.60  Aligned_cols=80  Identities=25%  Similarity=0.355  Sum_probs=52.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      +.+++|+|++|++|..++..+...|++|+++ .+++++.+.+.+.+   +..   ...|..+..++.+.+.....  +++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4589999999999999998888889999998 87776655444232   221   12344444233332322211  258


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |.+|.+.|.
T Consensus        85 d~vi~~ag~   93 (247)
T PRK05565         85 DILVNNAGI   93 (247)
T ss_pred             CEEEECCCc
Confidence            999998874

>PLN00015 protochlorophyllide reductase

Probab=97.05  E-value=0.0044  Score=51.43  Aligned_cols=75  Identities=16%  Similarity=0.182  Sum_probs=52.1

Q ss_pred             EEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC--C----ceeecCCchhHHHHHHhHc--CCCccEEE
Q 042426           85 YVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGF--D----DAFNYKEEPDLDAALNRCF--PEGIDIYF  155 (270)
Q Consensus        85 lI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~--~----~vi~~~~~~~~~~~i~~~~--~~~~d~v~  155 (270)
                      +|+|+++++|..+++.+...| ++|++++++.++.+.+.++++.  .    ...|..+.++....+.+..  .+++|+++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999998888889 8999999988877665545532  1    1235555423333333322  23689999


Q ss_pred             eCCC
Q 042426          156 ENVG  159 (270)
Q Consensus       156 d~~g  159 (270)
                      +++|
T Consensus        81 nnAG   84 (308)
T PLN00015         81 CNAA   84 (308)
T ss_pred             ECCC
Confidence            9887

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=97.05  E-value=0.0037  Score=50.47  Aligned_cols=104  Identities=13%  Similarity=0.106  Sum_probs=64.6

Q ss_pred             CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHHHhCCC--ceeecCCchhHHHHHHhHc--
Q 042426           80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSK------EKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCF--  147 (270)
Q Consensus        80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~------~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~--  147 (270)
                      .+.+++|+|++  +++|.++++.+...|++|+++.++.      +..+.+.++.+..  ...|..+.++..+.+.+..  
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            36789999985  7999999999988999998876432      2233333122211  1235555433333333322  


Q ss_pred             CCCccEEEeCCCcc--------h----------------------HHHHHHccccCCEEEEEcccc
Q 042426          148 PEGIDIYFENVGGK--------M----------------------LDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       148 ~~~~d~v~d~~g~~--------~----------------------~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      .+++|++++++|..        .                      .+..+..+..+|+++.+++..
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~  150 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG  150 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence            13699999998731        1                      134555666779999887654

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=97.05  E-value=0.011  Score=46.94  Aligned_cols=104  Identities=16%  Similarity=0.141  Sum_probs=71.2

Q ss_pred             hhhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHc
Q 042426           73 HELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        73 ~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      ..+.+..++.+||-.|  +++|..++.+++.++  .+|+.+..+++..+.+++   +.|...-+..... +..+.+.+..
T Consensus        61 ~~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l~  137 (234)
T PLN02781         61 SMLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQLL  137 (234)
T ss_pred             HHHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHHH
Confidence            3455667788999998  788888888888764  499999999988777763   3454333333333 4445444432


Q ss_pred             ----CCCccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426          148 ----PEGIDIYFENVGG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       148 ----~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                          .+.||+||--...    ..+..+++++++||.++.-
T Consensus       138 ~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d  177 (234)
T PLN02781        138 NNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD  177 (234)
T ss_pred             hCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence                2379999855432    3678889999999988753

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.04  E-value=0.0056  Score=50.69  Aligned_cols=102  Identities=17%  Similarity=0.254  Sum_probs=69.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----Cc----eeecCCch---hHHHHHHhHcC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF----DD----AFNYKEEP---DLDAALNRCFP  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~----~~----vi~~~~~~---~~~~~i~~~~~  148 (270)
                      .|-+++|+|+++|+|..++.-+...|++|+.++|+.++.+.+++++..    ..    ..|-.+..   .|.+.+.+. .
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~-~  112 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK-E  112 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc-C
Confidence            457899999999999999999999999999999998777666655442    12    12333331   233333322 1


Q ss_pred             CCccEEEeCCCcc------------------------hHHHHHHccccC--CEEEEEccc
Q 042426          149 EGIDIYFENVGGK------------------------MLDAVLLNMRIC--GHIAVCGMI  182 (270)
Q Consensus       149 ~~~d~v~d~~g~~------------------------~~~~~~~~l~~~--G~~v~~g~~  182 (270)
                      +..|+.++++|--                        ..+..+..|+..  +|+|.+++.
T Consensus       113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~  172 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSI  172 (314)
T ss_pred             CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCc
Confidence            2689999988721                        134555566554  799988763

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.03  E-value=0.012  Score=43.98  Aligned_cols=96  Identities=16%  Similarity=0.096  Sum_probs=63.5

Q ss_pred             cccCchhhhHHHHhhhhcCCCCCcEEEEecCCch-HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCch
Q 042426           59 GILGMPGLTAYGGLHELCSPKKGEYVYVSAASGA-VGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEP  137 (270)
Q Consensus        59 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~-vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~  137 (270)
                      .-.|+....+...+.+...--.+.+|+|.|+ |. +|..++..+...|++|+++.++.+                     
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------   79 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTK---------------------   79 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCch---------------------
Confidence            4455555555555544443356789999998 65 699899999999999888886521                     


Q ss_pred             hHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEccc
Q 042426          138 DLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       138 ~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      +..+.+.+     +|+||.+++.+.+ ...+.++++-.++.++.+
T Consensus        80 ~l~~~l~~-----aDiVIsat~~~~i-i~~~~~~~~~viIDla~p  118 (168)
T cd01080          80 NLKEHTKQ-----ADIVIVAVGKPGL-VKGDMVKPGAVVIDVGIN  118 (168)
T ss_pred             hHHHHHhh-----CCEEEEcCCCCce-ecHHHccCCeEEEEccCC
Confidence            23333333     8999999987542 222346666666677664

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.0051  Score=56.63  Aligned_cols=80  Identities=23%  Similarity=0.312  Sum_probs=55.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +.+++|+||+|++|..++..+...|++|+++++++++.+.+.+++   +..   ...|..+.++..+.+.+..  .+++|
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  450 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD  450 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            568999999999999999988888999999999988776654333   221   1235554423443333321  13689


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      ++++++|.
T Consensus       451 ~li~~Ag~  458 (657)
T PRK07201        451 YLVNNAGR  458 (657)
T ss_pred             EEEECCCC
Confidence            99999983

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.002  Score=51.98  Aligned_cols=76  Identities=22%  Similarity=0.281  Sum_probs=50.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d  156 (270)
                      ++.+++|+|++|++|..+++.+...|++|++++++.++.  ..  -... ...|..+.++..+.+.+..  .+++|++++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   83 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH   83 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            467999999999999999999988999999999875431  11  0111 1234444423332222221  136899999


Q ss_pred             CCC
Q 042426          157 NVG  159 (270)
Q Consensus       157 ~~g  159 (270)
                      ++|
T Consensus        84 ~ag   86 (260)
T PRK06523         84 VLG   86 (260)
T ss_pred             CCc
Confidence            987

>PRK09134 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.0071  Score=48.68  Aligned_cols=80  Identities=15%  Similarity=0.190  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      .+.+++|+||+|++|..+++.+...|++|+++.+. .++.+.+.+++   +..   ...|..+..+..+.+.+..  .++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35689999999999999999888899999887653 34443333222   332   1234444423333333321  236


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|+++.+.|
T Consensus        88 iD~vi~~ag   96 (258)
T PRK09134         88 ITLLVNNAS   96 (258)
T ss_pred             CCEEEECCc
Confidence            899999987

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=97.01  E-value=0.0047  Score=49.06  Aligned_cols=78  Identities=21%  Similarity=0.250  Sum_probs=50.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCccE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGIDI  153 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~  153 (270)
                      ++||+|++|++|..+++.+...|++|+++.+ ++++.+...++.   +..   ...|..+..++.+.+.+..  .+.+|.
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (242)
T TIGR01829         2 IALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDV   81 (242)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence            6899999999999999999889999999887 444443332122   211   1234444423333333221  136899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      +|.+.|.
T Consensus        82 vi~~ag~   88 (242)
T TIGR01829        82 LVNNAGI   88 (242)
T ss_pred             EEECCCC
Confidence            9999973

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.0056  Score=48.81  Aligned_cols=78  Identities=15%  Similarity=0.192  Sum_probs=51.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-c--eeecCCchhHHHHHHhHcCCCccEE
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD-D--AFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~--vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      .+++|+||+|++|...++.+...|++|+++++++++.+.+.+.+    +.. .  ..|..+..+..+.+.+.. ..+|++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v   80 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV   80 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence            47999999999999999999888999999999887665543222    111 1  124444323333333321 247999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      +.++|.
T Consensus        81 v~~ag~   86 (243)
T PRK07102         81 LIAVGT   86 (243)
T ss_pred             EECCcC
Confidence            988763

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=97.00  E-value=0.0031  Score=48.86  Aligned_cols=104  Identities=16%  Similarity=0.134  Sum_probs=71.0

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhH--
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRC--  146 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~--  146 (270)
                      ...+.....+||-+|  +.+|++++.+|+.+  +.+|+.+..+++..+.+++   +.|...-+..... +..+.+.++  
T Consensus        39 ~l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l~~  115 (205)
T PF01596_consen   39 MLVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPELAN  115 (205)
T ss_dssp             HHHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHHHH
T ss_pred             HHHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHHHh
Confidence            334445567899998  88999999999977  4699999999988877763   3455433444333 444444443  


Q ss_pred             -c-CCCccEEEeCCCc----chHHHHHHccccCCEEEEEc
Q 042426          147 -F-PEGIDIYFENVGG----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       147 -~-~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  180 (270)
                       . .+.||+||=-...    ..+..++++|+++|.++.=.
T Consensus       116 ~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN  155 (205)
T PF01596_consen  116 DGEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADN  155 (205)
T ss_dssp             TTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEET
T ss_pred             ccCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEcc
Confidence             2 2369998643332    26788999999999988743

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=97.00  E-value=0.015  Score=46.40  Aligned_cols=102  Identities=12%  Similarity=0.102  Sum_probs=72.2

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHc-
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCF-  147 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~-  147 (270)
                      .+.+.....+||-+|  +.+|.+++.+++.+  +.+|+.+..+++..+.+++   +.|..+-++.... +..+.+.++. 
T Consensus        73 ~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l~~  149 (247)
T PLN02589         73 MLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQMIE  149 (247)
T ss_pred             HHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHHHh
Confidence            344555667899998  89999999999877  4599999998887776653   3465444444444 5555555542 


Q ss_pred             ----CCCccEEEeCCCc----chHHHHHHccccCCEEEE
Q 042426          148 ----PEGIDIYFENVGG----KMLDAVLLNMRICGHIAV  178 (270)
Q Consensus       148 ----~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~  178 (270)
                          .+.||+||=-...    ..++.++++|++||.++.
T Consensus       150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence                2479999754443    267888999999999875

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.99  E-value=0.023  Score=38.07  Aligned_cols=86  Identities=21%  Similarity=0.232  Sum_probs=59.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC---CEEEEE-eCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVG---CYVVGS-ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g---~~v~~~-~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +|.|+|+ |.+|.+.+.-+...|   .+|+.+ .+++++.+.+.++++.....    . +..+.+++     .|+||-|+
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~----~-~~~~~~~~-----advvilav   69 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA----D-DNEEAAQE-----ADVVILAV   69 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES----E-EHHHHHHH-----TSEEEE-S
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc----C-ChHHhhcc-----CCEEEEEE
Confidence            4778886 999999999998888   799955 89999998887677753221    1 34444443     89999999


Q ss_pred             CcchHHHHHHc---cccCCEEEEE
Q 042426          159 GGKMLDAVLLN---MRICGHIAVC  179 (270)
Q Consensus       159 g~~~~~~~~~~---l~~~G~~v~~  179 (270)
                      -...+...++.   ..++..++.+
T Consensus        70 ~p~~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   70 KPQQLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred             CHHHHHHHHHHHhhccCCCEEEEe
Confidence            87655555544   4455666654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR02415 23BDH acetoin reductases

Probab=96.99  E-value=0.0052  Score=49.24  Aligned_cols=78  Identities=14%  Similarity=0.222  Sum_probs=52.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      +++|+|++|++|..+++.+...|++|+.+.+++++.+.+.+++   +..   ...|..+.++..+.+.+...  +.+|++
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   81 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM   81 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999889999999998876654443232   321   12344444233333333221  258999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      +.+.|.
T Consensus        82 i~~ag~   87 (254)
T TIGR02415        82 VNNAGV   87 (254)
T ss_pred             EECCCc
Confidence            999873

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.97  E-value=0.0071  Score=48.13  Aligned_cols=80  Identities=24%  Similarity=0.317  Sum_probs=50.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHh---CCC-ce--eecCCchhHHHHHHhHcC--CCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-VDLLKHKF---GFD-DA--FNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-~~~~~~~~---g~~-~v--i~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      +.+++|+|++|++|..++..+...|++|+++.++..+ .+...+.+   +.. ..  .|..+.+++.+.+.+...  +++
T Consensus         5 ~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (248)
T PRK05557          5 GKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGV   84 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999998889999887765542 22222122   222 12  255554233333333322  258


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |.++.++|.
T Consensus        85 d~vi~~ag~   93 (248)
T PRK05557         85 DILVNNAGI   93 (248)
T ss_pred             CEEEECCCc
Confidence            999998873

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.97  E-value=0.0063  Score=48.88  Aligned_cols=100  Identities=15%  Similarity=0.116  Sum_probs=61.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-hCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK-FGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~-~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +.+|+|+||+|.+|..+++.+...|.+|+++.|++++....... .+.. ...|..+.  . +.+.+....++|+||.+.
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~--~-~~l~~~~~~~~d~vi~~~   93 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG--S-DKLVEAIGDDSDAVICAT   93 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC--H-HHHHHHhhcCCCEEEECC
Confidence            46899999999999999998888899999999887765433211 1121 11243331  1 222222212589999887


Q ss_pred             Ccc--------------hHHHHHHccccC--CEEEEEcccc
Q 042426          159 GGK--------------MLDAVLLNMRIC--GHIAVCGMIS  183 (270)
Q Consensus       159 g~~--------------~~~~~~~~l~~~--G~~v~~g~~~  183 (270)
                      |..              .....++.+...  ++++.++...
T Consensus        94 g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~  134 (251)
T PLN00141         94 GFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL  134 (251)
T ss_pred             CCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence            631              123344444433  6888877643

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=96.95  E-value=0.0083  Score=45.33  Aligned_cols=79  Identities=14%  Similarity=0.182  Sum_probs=54.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--Cce---eecCCchhHHHHHHhHc--CCCccEE
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--DDA---FNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~~v---i~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      ...+|.|+++++|.+..|++...|++|.+.+.+.+..+.....+|-  +|.   .|.++..+....+.+..  .|.++++
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvl   94 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVL   94 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEE
Confidence            5689999999999999999999999999999777665555436654  221   23344323322233222  1268999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      ++|.|-
T Consensus        95 VncAGI  100 (256)
T KOG1200|consen   95 VNCAGI  100 (256)
T ss_pred             EEcCcc
Confidence            999993

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.95  E-value=0.0069  Score=48.86  Aligned_cols=81  Identities=19%  Similarity=0.189  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      ++.+++|+||++++|..+++.+...|++|+++.++. +..+.+.++   .+..   ...|..+..+..+.+.+..  .++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999998887743 333322212   2322   1234554423333333221  136


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|+++.+.|.
T Consensus        86 id~lv~~ag~   95 (261)
T PRK08936         86 LDVMINNAGI   95 (261)
T ss_pred             CCEEEECCCC
Confidence            8999999883

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.95  E-value=0.012  Score=43.33  Aligned_cols=94  Identities=23%  Similarity=0.238  Sum_probs=61.6

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      .++.+++|+|+ |++|...++.+...| .+|++..++.++.+.+.++++... ..+..   +..+.+     +++|+|+.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEELL-----AEADLIIN   87 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhcc-----ccCCEEEe
Confidence            44678999997 999999999888886 689999998888776654666421 11111   222222     24999999


Q ss_pred             CCCcchH-----HHHHHccccCCEEEEEcc
Q 042426          157 NVGGKML-----DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       157 ~~g~~~~-----~~~~~~l~~~G~~v~~g~  181 (270)
                      |++....     ......++++..++.++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence            9986432     112234566666666644

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.01  Score=47.62  Aligned_cols=80  Identities=20%  Similarity=0.242  Sum_probs=52.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhH---c---
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRC---F---  147 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~---~---  147 (270)
                      +.+++|+|++|++|..+++.+...|++|++. .++.++.+...+++   +..   ...|..+..++.+.+.+.   .   
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~   85 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR   85 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence            4689999999999999999888889988775 56666554443233   221   123555543444433332   1   


Q ss_pred             -C-CCccEEEeCCCc
Q 042426          148 -P-EGIDIYFENVGG  160 (270)
Q Consensus       148 -~-~~~d~v~d~~g~  160 (270)
                       + +++|+++.+.|.
T Consensus        86 ~~~~~id~vi~~ag~  100 (254)
T PRK12746         86 VGTSEIDILVNNAGI  100 (254)
T ss_pred             cCCCCccEEEECCCC
Confidence             1 258999999874

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.93  E-value=0.013  Score=44.76  Aligned_cols=98  Identities=18%  Similarity=0.149  Sum_probs=60.5

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHhCCCce-eecCCchhHHHHHHhHcCC-C
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV-G-CYVVGSARSKEKVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPE-G  150 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g-~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~-~  150 (270)
                      ...+++|++||.+|+ | .|..+..+++.. + .+|++++.++..    . ..++..+ .|..+. ...+.+.+..++ +
T Consensus        27 ~~~i~~g~~VLDiG~-G-tG~~~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~   98 (188)
T TIGR00438        27 FKLIKPGDTVLDLGA-A-PGGWSQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDK   98 (188)
T ss_pred             hcccCCCCEEEEecC-C-CCHHHHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCC
Confidence            356789999999995 3 344455555543 3 489999988643    1 2233311 244333 344445554444 7


Q ss_pred             ccEEEeC-----CC-------------cchHHHHHHccccCCEEEEEc
Q 042426          151 IDIYFEN-----VG-------------GKMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       151 ~d~v~d~-----~g-------------~~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +|+|+..     .|             ...+..+.++|+++|+++...
T Consensus        99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438        99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            9999952     12             125677888999999998753

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.91  E-value=0.0058  Score=49.99  Aligned_cols=75  Identities=12%  Similarity=-0.034  Sum_probs=52.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      ++.+++|+|+ |+.+.+++.-+..+|+ +|+++.|+.++.+.+.++++.. .+.....   . +.+.+.. ..+|+|++|
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~---~-~~~~~~~-~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG---D-SGGLAIE-KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc---h-hhhhhcc-cCCCEEEEC
Confidence            4678999997 9999999999999998 8999999998888776565432 1111110   0 1111111 248999999


Q ss_pred             CCc
Q 042426          158 VGG  160 (270)
Q Consensus       158 ~g~  160 (270)
                      +..
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            874

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.89  E-value=0.012  Score=44.13  Aligned_cols=93  Identities=18%  Similarity=0.232  Sum_probs=62.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--DDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +|.|+||+|-+|...++=|...|-+|++++|++.+....+ ...+  ..++|      .......+  .|+|+|+++.|.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd------~~~~a~~l--~g~DaVIsA~~~   72 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFD------LTSLASDL--AGHDAVISAFGA   72 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccC------hhhhHhhh--cCCceEEEeccC
Confidence            5889999999999999999999999999999998876543 2211  01222      11111112  259999999875


Q ss_pred             c----------hHHHHHHccccC--CEEEEEccccc
Q 042426          161 K----------MLDAVLLNMRIC--GHIAVCGMISQ  184 (270)
Q Consensus       161 ~----------~~~~~~~~l~~~--G~~v~~g~~~~  184 (270)
                      .          ..+..+..|+.-  -|+..+|..+.
T Consensus        73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS  108 (211)
T COG2910          73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS  108 (211)
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence            3          223455566653  37777776443

>PLN02366 spermidine synthase

Probab=96.88  E-value=0.014  Score=48.31  Aligned_cols=98  Identities=15%  Similarity=0.109  Sum_probs=62.9

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC------CceeecCCchhHHHHHHhHcCCCc
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF------DDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      .+..+||++|+  |-|..+..++++-+. +|.++..+++-.+.+++.+..      +.-+..... |..+.+++..++.|
T Consensus        90 ~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~y  166 (308)
T PLN02366         90 PNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGTY  166 (308)
T ss_pred             CCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCCC
Confidence            45689999995  446677788887665 888999888877877743432      101111112 33344443323479


Q ss_pred             cEEEeCCCc-----------chHHHHHHccccCCEEEEE
Q 042426          152 DIYFENVGG-----------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       152 d~v~d~~g~-----------~~~~~~~~~l~~~G~~v~~  179 (270)
                      |+|+--...           +.++.+.+.|+++|.++.-
T Consensus       167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q  205 (308)
T PLN02366        167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ  205 (308)
T ss_pred             CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence            998754322           2477889999999999753

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.87  E-value=0.035  Score=45.15  Aligned_cols=95  Identities=14%  Similarity=0.141  Sum_probs=60.8

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      ..+.+++|+|+ |++|.+++..+...|++|++..++.++.+.+.++++........   ...+    .....+|+|++|+
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~---~~~~----~~~~~~DivInat  186 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF---SMDE----LPLHRVDLIINAT  186 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe---chhh----hcccCccEEEECC
Confidence            45678999998 89999999888888999999999988776665454321101010   1111    1112589999999


Q ss_pred             Ccch---H---HHHHHccccCCEEEEEcc
Q 042426          159 GGKM---L---DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       159 g~~~---~---~~~~~~l~~~G~~v~~g~  181 (270)
                      +...   .   ......++++..++.+..
T Consensus       187 p~gm~~~~~~~~~~~~~l~~~~~v~D~~y  215 (270)
T TIGR00507       187 SAGMSGNIDEPPVPAEKLKEGMVVYDMVY  215 (270)
T ss_pred             CCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            8531   1   112345677777776644

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK00811 spermidine synthase; Provisional

Probab=96.87  E-value=0.012  Score=48.18  Aligned_cols=97  Identities=9%  Similarity=0.064  Sum_probs=63.4

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC-------CceeecCCchhHHHHHHhHcCCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF-------DDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~-------~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      .+..+||++|  +|.|..+..+++..+. +|.++..+++-.+.+++.+..       +.-+..... |..+.+.. ..+.
T Consensus        75 ~~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~  150 (283)
T PRK00811         75 PNPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENS  150 (283)
T ss_pred             CCCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCc
Confidence            3457899999  5667778888887665 899999999888888744421       111111112 33444433 3447


Q ss_pred             ccEEEeCCCc-----------chHHHHHHccccCCEEEEE
Q 042426          151 IDIYFENVGG-----------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       151 ~d~v~d~~g~-----------~~~~~~~~~l~~~G~~v~~  179 (270)
                      ||+|+-....           +.++.+.+.|+++|.++.-
T Consensus       151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            9998764321           2457888999999998864

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.86  E-value=0.018  Score=45.44  Aligned_cols=101  Identities=18%  Similarity=0.253  Sum_probs=72.6

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~  148 (270)
                      ...++.+|++|+=.|  .|.|-+++.||++.|-  +|+.....++..+.+++   ++|....+..... |..+.+...  
T Consensus        88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-Dv~~~~~~~--  162 (256)
T COG2519          88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-DVREGIDEE--  162 (256)
T ss_pred             HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-ccccccccc--
Confidence            457899999998877  6778899999998875  99999988887777763   3455433333332 333322221  


Q ss_pred             CCccEEEeCCCcc--hHHHHHHccccCCEEEEEc
Q 042426          149 EGIDIYFENVGGK--MLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       149 ~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g  180 (270)
                       .+|.+|=-...+  .++.+.+.|+++|+++.+.
T Consensus       163 -~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~  195 (256)
T COG2519         163 -DVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS  195 (256)
T ss_pred             -ccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence             588887656554  8899999999999998873

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=96.86  E-value=0.0024  Score=51.69  Aligned_cols=76  Identities=14%  Similarity=0.164  Sum_probs=51.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d~  157 (270)
                      +.+++|+|++|++|.++++.+...|++|+.+++++++.+.    .... ...|..+..++.+.+.+..  .+.+|+++.+
T Consensus         9 ~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~   84 (266)
T PRK06171          9 GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNN   84 (266)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            5789999999999999999999999999999877644321    1111 2235554423443333322  1368999998


Q ss_pred             CCc
Q 042426          158 VGG  160 (270)
Q Consensus       158 ~g~  160 (270)
                      .|.
T Consensus        85 Ag~   87 (266)
T PRK06171         85 AGI   87 (266)
T ss_pred             Ccc
Confidence            873

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.85  E-value=0.009  Score=46.14  Aligned_cols=97  Identities=12%  Similarity=0.043  Sum_probs=62.1

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      ...++.+||-.|  +|.|..++.+++. |.+|++++.+++-.+.+++..   +... +..... ++.+.   ..++.||+
T Consensus        27 ~~~~~~~vLDiG--cG~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~~~~---~~~~~fD~   98 (197)
T PRK11207         27 KVVKPGKTLDLG--CGNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DLNNL---TFDGEYDF   98 (197)
T ss_pred             ccCCCCcEEEEC--CCCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-ChhhC---CcCCCcCE
Confidence            345667899998  6678888888875 889999999988777666322   2221 111111 22211   11236999


Q ss_pred             EEeCCCc---------chHHHHHHccccCCEEEEEcc
Q 042426          154 YFENVGG---------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       154 v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      |+.+..-         ..+....+.|+|+|.++.+..
T Consensus        99 I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~  135 (197)
T PRK11207         99 ILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA  135 (197)
T ss_pred             EEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence            9875431         256778889999999665443

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.85  E-value=0.0059  Score=48.71  Aligned_cols=80  Identities=24%  Similarity=0.311  Sum_probs=49.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHH-HHHHH--HhCCCc---eeecCCchhHHHHHHhHc--CCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKV-DLLKH--KFGFDD---AFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~-~~~~~--~~g~~~---vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      +.+++|+|++|++|..+++.+...|++|++..+ +..+. +.+.+  ..+...   ..|..+..+..+.+.+..  .+++
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI   82 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            568999999999999999999999999888653 23322 22220  234321   134444323333333221  1368


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+++++.|.
T Consensus        83 d~li~~ag~   91 (246)
T PRK12938         83 DVLVNNAGI   91 (246)
T ss_pred             CEEEECCCC
Confidence            999999974

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.85  E-value=0.023  Score=44.92  Aligned_cols=111  Identities=23%  Similarity=0.288  Sum_probs=75.8

Q ss_pred             hhHHH-HhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC---CceeecCCchhHH
Q 042426           66 LTAYG-GLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF---DDAFNYKEEPDLD  140 (270)
Q Consensus        66 ~ta~~-~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~  140 (270)
                      .-.|. .+....+..+|++||=.+  +|+|-+++.+++..|- +|++++.++.-++.++++..-   .. +.+-.. +..
T Consensus        36 ~~~Wr~~~i~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~-dAe  111 (238)
T COG2226          36 HRLWRRALISLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG-DAE  111 (238)
T ss_pred             hHHHHHHHHHhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe-chh
Confidence            34444 233444566899999987  8899999999998875 999999999988888755432   11 221111 111


Q ss_pred             HHHHhHcCC-CccEEEeCCCc-------chHHHHHHccccCCEEEEEcccc
Q 042426          141 AALNRCFPE-GIDIYFENVGG-------KMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       141 ~~i~~~~~~-~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                       .+.  .++ .||++.-+.|-       ..+.++.+.|+|+|+++.+....
T Consensus       112 -~LP--f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~  159 (238)
T COG2226         112 -NLP--FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK  159 (238)
T ss_pred             -hCC--CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence             111  222 68998877772       37899999999999999886643

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=96.84  E-value=0.014  Score=47.29  Aligned_cols=102  Identities=13%  Similarity=0.192  Sum_probs=67.6

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcC-CCcc
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFP-EGID  152 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~-~~~d  152 (270)
                      ...++.++.+||=.|  +|.|..+..+++..+++|++++.+++-.+.+++.......+..... ++.+   ...+ +.||
T Consensus        46 ~~l~l~~~~~VLDiG--cG~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~~---~~~~~~~FD  119 (263)
T PTZ00098         46 SDIELNENSKVLDIG--SGLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DILK---KDFPENTFD  119 (263)
T ss_pred             HhCCCCCCCEEEEEc--CCCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-Cccc---CCCCCCCeE
Confidence            556788999999998  4556667777777788999999999888888744432211222111 2211   1112 3699


Q ss_pred             EEEeCC-----C--c--chHHHHHHccccCCEEEEEcc
Q 042426          153 IYFENV-----G--G--KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       153 ~v~d~~-----g--~--~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +|+..-     .  .  ..+..+.+.|+|+|+++....
T Consensus       120 ~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        120 MIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             EEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            998621     1  1  267888899999999987654

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.84  E-value=0.0085  Score=48.72  Aligned_cols=71  Identities=20%  Similarity=0.251  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCc----eeecCCchhHHHHHHhHcCCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDD----AFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~----vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      +|.+++|.|| ||.+.+++.-+...|+ +++++.|+.++.+.+.+.++...    .....+.    +...     .+|++
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~----~~~~-----~~dli  194 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADL----EGLE-----EADLL  194 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccc----cccc-----ccCEE
Confidence            5789999998 9999999999999997 89999999999888875666421    1111111    0000     38999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      +||+.-
T Consensus       195 INaTp~  200 (283)
T COG0169         195 INATPV  200 (283)
T ss_pred             EECCCC
Confidence            999873

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.84  E-value=0.011  Score=48.56  Aligned_cols=45  Identities=20%  Similarity=0.202  Sum_probs=35.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHh
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSK---EKVDLLKHKF  125 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~---~~~~~~~~~~  125 (270)
                      .+.+++|+|+ ||+|.+++..+...|+ +|+++.|+.   ++.+.+.+++
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l  173 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI  173 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence            4678999998 8999999988888999 599999885   4554444344

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.83  E-value=0.018  Score=45.09  Aligned_cols=93  Identities=18%  Similarity=0.210  Sum_probs=62.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      +|-+||=.|.  |.|+.+.-+| .+|++|++++.+++..+.++.   +-|.  .+||... . .+.+.+.. +.||+|+.
T Consensus        59 ~g~~vLDvGC--GgG~Lse~mA-r~Ga~VtgiD~se~~I~~Ak~ha~e~gv--~i~y~~~-~-~edl~~~~-~~FDvV~c  130 (243)
T COG2227          59 PGLRVLDVGC--GGGILSEPLA-RLGASVTGIDASEKPIEVAKLHALESGV--NIDYRQA-T-VEDLASAG-GQFDVVTC  130 (243)
T ss_pred             CCCeEEEecC--CccHhhHHHH-HCCCeeEEecCChHHHHHHHHhhhhccc--cccchhh-h-HHHHHhcC-CCccEEEE
Confidence            6778998885  4455555554 458999999999999988872   2222  2567653 2 23332221 47999865


Q ss_pred             -----CCCc--chHHHHHHccccCCEEEEEc
Q 042426          157 -----NVGG--KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       157 -----~~g~--~~~~~~~~~l~~~G~~v~~g  180 (270)
                           -+..  ..+..+.++++|+|.++...
T Consensus       131 mEVlEHv~dp~~~~~~c~~lvkP~G~lf~ST  161 (243)
T COG2227         131 MEVLEHVPDPESFLRACAKLVKPGGILFLST  161 (243)
T ss_pred             hhHHHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence                 3433  26788999999999988753

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.83  E-value=0.021  Score=46.54  Aligned_cols=149  Identities=18%  Similarity=0.183  Sum_probs=86.6

Q ss_pred             CCCCCEEEecccceeeEeecCCccceeccCCCCCccccccccCchhhhHHH--HhhhhcCCCCCcEEEEecCCchHHHHH
Q 042426           20 YKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYG--GLHELCSPKKGEYVYVSAASGAVGQLV   97 (270)
Q Consensus        20 ~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~--~l~~~~~~~~g~~vlI~ga~g~vG~~a   97 (270)
                      +++|++.+-.-+|.+|-.-.... ++++ ..+  +.|....=|   .|++.  ++.  ..+++|.+++=.|  +|.|-++
T Consensus       109 ~rig~~f~I~Psw~~~~~~~~~~-~i~l-DPG--lAFGTG~Hp---TT~lcL~~Le--~~~~~g~~vlDvG--cGSGILa  177 (300)
T COG2264         109 VRIGERFVIVPSWREYPEPSDEL-NIEL-DPG--LAFGTGTHP---TTSLCLEALE--KLLKKGKTVLDVG--CGSGILA  177 (300)
T ss_pred             EEeeeeEEECCCCccCCCCCCce-EEEE-ccc--cccCCCCCh---hHHHHHHHHH--HhhcCCCEEEEec--CChhHHH
Confidence            56688777777777764443233 6666 444  444222222   23222  332  2356899999998  6667766


Q ss_pred             HHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCcee--ecCCchhHHHHHHhHcCCCccEEEeCCCc----chHHHHHHcc
Q 042426           98 GQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAF--NYKEEPDLDAALNRCFPEGIDIYFENVGG----KMLDAVLLNM  170 (270)
Q Consensus        98 i~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi--~~~~~~~~~~~i~~~~~~~~d~v~d~~g~----~~~~~~~~~l  170 (270)
                      |-.++ +|+ +|++++.++-..+.+++-.....+-  .........+.   ...+.||+|+-..=.    .........+
T Consensus       178 IAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~---~~~~~~DvIVANILA~vl~~La~~~~~~l  253 (300)
T COG2264         178 IAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEV---PENGPFDVIVANILAEVLVELAPDIKRLL  253 (300)
T ss_pred             HHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhh---cccCcccEEEehhhHHHHHHHHHHHHHHc
Confidence            65544 477 7999998887766665322111111  01110011111   112369999877633    2566788899


Q ss_pred             ccCCEEEEEcccc
Q 042426          171 RICGHIAVCGMIS  183 (270)
Q Consensus       171 ~~~G~~v~~g~~~  183 (270)
                      +|+|+++..|...
T Consensus       254 kpgg~lIlSGIl~  266 (300)
T COG2264         254 KPGGRLILSGILE  266 (300)
T ss_pred             CCCceEEEEeehH
Confidence            9999999998744

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.82  E-value=0.01  Score=47.30  Aligned_cols=80  Identities=21%  Similarity=0.291  Sum_probs=50.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC-c--eeecCCchhHHHHHHhHcC--CCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKF---GFD-D--AFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      +.+++|+|++|++|..+++.+...|++|+++.+ ++++.+.+.+++   +.. .  ..|..+...+.+.+.+...  +.+
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKV   85 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999988888999887654 444443332122   322 1  1344443233333333222  258


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |.++.++|.
T Consensus        86 d~vi~~ag~   94 (247)
T PRK12935         86 DILVNNAGI   94 (247)
T ss_pred             CEEEECCCC
Confidence            999999874

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=96.80  E-value=0.012  Score=50.68  Aligned_cols=105  Identities=21%  Similarity=0.206  Sum_probs=64.4

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH------HHHHHh-CCC-ceeecCCchhHHHHHHhHcCC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD------LLKHKF-GFD-DAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~------~~~~~~-g~~-~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      -..+.+|+|+||+|.+|..+++.+...|.+|++++++..+.+      ...+.. +.. ...|..+.+++.+.+.+. .+
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~~  135 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-GD  135 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-CC
Confidence            345679999999999999999998888999999998765432      111011 222 123555542344444332 11


Q ss_pred             CccEEEeCCCcc------h-------HHHHHHccccC--CEEEEEcccc
Q 042426          150 GIDIYFENVGGK------M-------LDAVLLNMRIC--GHIAVCGMIS  183 (270)
Q Consensus       150 ~~d~v~d~~g~~------~-------~~~~~~~l~~~--G~~v~~g~~~  183 (270)
                      ++|+||+|++..      .       ....++.+...  +++|.++...
T Consensus       136 ~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~  184 (390)
T PLN02657        136 PVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC  184 (390)
T ss_pred             CCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence            599999998631      1       12334444333  4788877543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.79  E-value=0.01  Score=47.58  Aligned_cols=79  Identities=15%  Similarity=0.216  Sum_probs=50.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCcc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGID  152 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~d  152 (270)
                      .+++|+|++|++|..+++.+...|++|++++++. ++.+...+.+   +..   ...|..+..++.+.+.+...  +.+|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999999988999999998653 2322222122   221   12355554233333333321  3589


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      +++.+.|.
T Consensus        83 ~vi~~ag~   90 (256)
T PRK12745         83 CLVNNAGV   90 (256)
T ss_pred             EEEECCcc
Confidence            99999873

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.012  Score=46.49  Aligned_cols=74  Identities=18%  Similarity=0.259  Sum_probs=51.4

Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CCC-c--eeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           85 YVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF--GFD-D--AFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        85 lI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~--vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +|+|+++++|..+++.+...|++|++++++.++.+.+.+.+  +.. +  ..|..+.+++.+.+.+.  +++|+++.+.|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            58999999999999988889999999999877766554333  221 1  23555543444444332  35899999987


Q ss_pred             c
Q 042426          160 G  160 (270)
Q Consensus       160 ~  160 (270)
                      .
T Consensus        79 ~   79 (230)
T PRK07041         79 D   79 (230)
T ss_pred             C
Confidence            3

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.79  E-value=0.018  Score=47.14  Aligned_cols=71  Identities=21%  Similarity=0.139  Sum_probs=50.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC----ceeecCCchhHHHHHHhHcCCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD----DAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      .+.+++|.|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++..    .+....   +..+.+     ..+|+|
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~-----~~aDiV  196 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL-----AAADGL  196 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh-----CCCCEE
Confidence            4578999997 9999999999999998 8999999988887776455321    121111   222222     248999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++|+.
T Consensus       197 InaTp  201 (284)
T PRK12549        197 VHATP  201 (284)
T ss_pred             EECCc
Confidence            99964

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.79  E-value=0.011  Score=46.40  Aligned_cols=100  Identities=21%  Similarity=0.241  Sum_probs=65.4

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~  148 (270)
                      +...++++++||-.|  +|.|..++.+++..+.  +|+.+..+++-.+.+++   +.|.+++- .... +..+...  ..
T Consensus        71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~-~~~~-d~~~~~~--~~  144 (215)
T TIGR00080        71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVI-VIVG-DGTQGWE--PL  144 (215)
T ss_pred             HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeE-EEEC-CcccCCc--cc
Confidence            455688999999998  7778888888887654  79999999887776653   33443221 1111 2211111  11


Q ss_pred             CCccEEEeCCCc-chHHHHHHccccCCEEEEE
Q 042426          149 EGIDIYFENVGG-KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       149 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  179 (270)
                      +.||+|+-.... .......+.|+++|+++..
T Consensus       145 ~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       145 APYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             CCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            269988754433 4556788899999998864

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=96.77  E-value=0.047  Score=38.75  Aligned_cols=95  Identities=20%  Similarity=0.232  Sum_probs=55.1

Q ss_pred             EEEecCCchHHHHHHHHHHHcC--CEEEEEeCC--HHHHHHHHHHhCCCceeecCCc--hhHHHH---------------
Q 042426           84 VYVSAASGAVGQLVGQFVKLVG--CYVVGSARS--KEKVDLLKHKFGFDDAFNYKEE--PDLDAA---------------  142 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~--~~~~~~~~~~~g~~~vi~~~~~--~~~~~~---------------  142 (270)
                      |.|.|+||++|..++.+.+.+.  ++|+..+..  -+.+....++|....+.-.++.  ..+.+.               
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            6799999999999999999887  688777743  2333332237777655544332  011111               


Q ss_pred             -HHhHcC-CCccEEEeCCCc-chHHHHHHccccCCEEEE
Q 042426          143 -LNRCFP-EGIDIYFENVGG-KMLDAVLLNMRICGHIAV  178 (270)
Q Consensus       143 -i~~~~~-~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~  178 (270)
                       +.+... ..+|+++.++.+ .-+.-.+..++.+-++..
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence             122222 257888887754 566667777776655544

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.76  E-value=0.025  Score=46.23  Aligned_cols=45  Identities=20%  Similarity=0.167  Sum_probs=38.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKF  125 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~  125 (270)
                      .+.+++|+|+ ||.+.+++.-+...|+ +++++.|+.++.+.+.+++
T Consensus       126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~  171 (283)
T PRK14027        126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI  171 (283)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence            4678999998 9999999988888998 8999999998887776554

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.75  E-value=0.013  Score=46.35  Aligned_cols=70  Identities=26%  Similarity=0.378  Sum_probs=50.4

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCCce-eecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE--KVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~--~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      |+|.||+|.+|..+++.+...+.+|.+.+|+..  ..+.++ ..|+..+ .|+.+.+++.+.++     |+|.||.+.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~~~l~~al~-----g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDPESLVAALK-----GVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-HHHHHHHHT-----TCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCHHHHHHHHc-----CCceEEeecC
Confidence            789999999999999999888899999998764  355566 6787532 34443323333332     5999999888

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=96.74  E-value=0.05  Score=45.35  Aligned_cols=88  Identities=22%  Similarity=0.189  Sum_probs=63.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.++.|+|. |.+|++.+++++..|.+|+...+++.  +...++.++.++       ++.+.+.+     .|++.-...
T Consensus       145 ~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~-------~l~ell~~-----sDii~l~~P  209 (324)
T COG1052         145 RGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYV-------DLDELLAE-----SDIISLHCP  209 (324)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceec-------cHHHHHHh-----CCEEEEeCC
Confidence            3789999996 99999999999999999999998765  333224444322       34444444     788766554


Q ss_pred             -cc-----hHHHHHHccccCCEEEEEccc
Q 042426          160 -GK-----MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       160 -~~-----~~~~~~~~l~~~G~~v~~g~~  182 (270)
                       ++     .-...++.|++++.+|.++..
T Consensus       210 lt~~T~hLin~~~l~~mk~ga~lVNtaRG  238 (324)
T COG1052         210 LTPETRHLINAEELAKMKPGAILVNTARG  238 (324)
T ss_pred             CChHHhhhcCHHHHHhCCCCeEEEECCCc
Confidence             32     235788899999999998773

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.74  E-value=0.062  Score=45.97  Aligned_cols=94  Identities=23%  Similarity=0.305  Sum_probs=65.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      .+.++||+|+ |-+|..++..+...|+ +|++..|+.++.+.+.+++|.. ++..+   +....+.+     +|+||.++
T Consensus       177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~---el~~~l~~-----~DvVissT  246 (414)
T COG0373         177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE---ELLEALAE-----ADVVISST  246 (414)
T ss_pred             ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH---HHHHhhhh-----CCEEEEec
Confidence            5678999998 9999999999999996 8999999999888777799953 33222   23333333     99999999


Q ss_pred             Ccc----hHHHHHHccccC-C-EEEEEcccc
Q 042426          159 GGK----MLDAVLLNMRIC-G-HIAVCGMIS  183 (270)
Q Consensus       159 g~~----~~~~~~~~l~~~-G-~~v~~g~~~  183 (270)
                      +.+    .-......++.. . .++.++.+.
T Consensus       247 sa~~~ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         247 SAPHPIITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             CCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence            875    223333344433 2 455666643

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.73  E-value=0.0048  Score=47.78  Aligned_cols=89  Identities=10%  Similarity=0.019  Sum_probs=55.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeecCCchhHHH-HHHhHcCCCccEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFGFDDAFNYKEEPDLDA-ALNRCFPEGIDIYFEN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~-~i~~~~~~~~d~v~d~  157 (270)
                      .|.+|+|.|+ |.+|...++.+...|++|+++.+... ....+. .-+. ..+..+.   +.+ .+     .++|+|+-+
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~-i~~~~~~---~~~~~l-----~~adlViaa   77 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGK-IRWKQKE---FEPSDI-----VDAFLVIAA   77 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCC-EEEEecC---CChhhc-----CCceEEEEc
Confidence            3578999998 99999999888888999998875421 222222 1121 1111111   111 11     258999999


Q ss_pred             CCcchHHHHHHccccCCEEEEE
Q 042426          158 VGGKMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       158 ~g~~~~~~~~~~l~~~G~~v~~  179 (270)
                      ++.+.++..+...+..+.++..
T Consensus        78 T~d~elN~~i~~~a~~~~lvn~   99 (202)
T PRK06718         78 TNDPRVNEQVKEDLPENALFNV   99 (202)
T ss_pred             CCCHHHHHHHHHHHHhCCcEEE
Confidence            9988777666655555666654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.73  E-value=0.011  Score=50.71  Aligned_cols=91  Identities=19%  Similarity=0.207  Sum_probs=56.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcC-C-EEEEEeCCHHHHHHHHHHhC-CC---ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           84 VYVSAASGAVGQLVGQFVKLVG-C-YVVGSARSKEKVDLLKHKFG-FD---DAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g-~-~v~~~~~~~~~~~~~~~~~g-~~---~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      |+|+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+++. ..   ..+|..+..+    +.+... +.|+|++|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----l~~~~~-~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPES----LAELLR-GCDVVINC   74 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHH----HHHHHT-TSSEEEE-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHH----HHHHHh-cCCEEEEC
Confidence            789999 999999999887665 4 89999999999888764422 21   2345544312    333322 37999999


Q ss_pred             CCcchHH-HHHHccccCCEEEEEc
Q 042426          158 VGGKMLD-AVLLNMRICGHIAVCG  180 (270)
Q Consensus       158 ~g~~~~~-~~~~~l~~~G~~v~~g  180 (270)
                      +|..... -+-.|++.+-.++..+
T Consensus        75 ~gp~~~~~v~~~~i~~g~~yvD~~   98 (386)
T PF03435_consen   75 AGPFFGEPVARACIEAGVHYVDTS   98 (386)
T ss_dssp             SSGGGHHHHHHHHHHHT-EEEESS
T ss_pred             CccchhHHHHHHHHHhCCCeeccc
Confidence            9975333 4444566677888743

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=96.73  E-value=0.017  Score=48.40  Aligned_cols=75  Identities=15%  Similarity=0.131  Sum_probs=48.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhCCCc----eeecCCchhHHHHHHhHcCCCccEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKFGFDD----AFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~g~~~----vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      |.+|||+||+|.+|..+++.+...|  .+|++.+++..+.+.+.+.+....    ..|..+...+.+.+.     ++|+|
T Consensus         4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-----~iD~V   78 (324)
T TIGR03589         4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-----GVDYV   78 (324)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-----cCCEE
Confidence            5789999999999999988877665  689988877665444432332211    124444322333222     38999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      |.++|.
T Consensus        79 ih~Ag~   84 (324)
T TIGR03589        79 VHAAAL   84 (324)
T ss_pred             EECccc
Confidence            998873

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK04148 hypothetical protein; Provisional

Probab=96.72  E-value=0.023  Score=40.58  Aligned_cols=47  Identities=21%  Similarity=0.195  Sum_probs=37.5

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD  128 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~  128 (270)
                      .++.++++.|. | .|...+..+...|.+|++++.+++..+.++ +.+.+
T Consensus        15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~   61 (134)
T PRK04148         15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLN   61 (134)
T ss_pred             ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCe
Confidence            34678999996 6 887566666678999999999999988887 66654

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.71  E-value=0.043  Score=46.05  Aligned_cols=88  Identities=20%  Similarity=0.207  Sum_probs=63.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|..+++.++.+|.+|++..++.... ... ..+..    +  . ++.+.+.+     .|+|+-++.
T Consensus       149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~----~--~-~l~ell~~-----aDiV~l~lP  213 (333)
T PRK13243        149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAE----Y--R-PLEELLRE-----SDFVSLHVP  213 (333)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCE----e--c-CHHHHHhh-----CCEEEEeCC
Confidence            4679999997 9999999999999999999998765432 222 44432    1  1 34444444     799998886


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEccc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      . +     .-...+..|+++..++.++..
T Consensus       214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aRg  242 (333)
T PRK13243        214 LTKETYHMINEERLKLMKPTAILVNTARG  242 (333)
T ss_pred             CChHHhhccCHHHHhcCCCCeEEEECcCc
Confidence            3 2     224678889999999998763

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.71  E-value=0.024  Score=46.07  Aligned_cols=68  Identities=16%  Similarity=0.172  Sum_probs=50.0

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      ...+.+++|.|+ ||.+.+++.-+...|+ +|+++.|+.++.+.+.++++..          +...+.   ...+|+|++
T Consensus       119 ~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----------~~~~~~---~~~~dlvIN  184 (272)
T PRK12550        119 VPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----------WRPDLG---GIEADILVN  184 (272)
T ss_pred             CCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----------chhhcc---cccCCEEEE
Confidence            444568999997 9999999999999998 7999999998888776455421          111111   124899999


Q ss_pred             CCC
Q 042426          157 NVG  159 (270)
Q Consensus       157 ~~g  159 (270)
                      |+.
T Consensus       185 aTp  187 (272)
T PRK12550        185 VTP  187 (272)
T ss_pred             CCc
Confidence            986

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.70  E-value=0.013  Score=46.49  Aligned_cols=79  Identities=25%  Similarity=0.336  Sum_probs=49.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      ..++||+||+|++|..+++.+...|.+|+++.++.. ..+.+.+.   .+..   ...|..+..++.+.+.+...  +++
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   85 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI   85 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence            358999999999999999999889999877665543 33322212   2221   12344444233333333211  368


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |.++.++|
T Consensus        86 d~vi~~ag   93 (249)
T PRK12825         86 DILVNNAG   93 (249)
T ss_pred             CEEEECCc
Confidence            99999987

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.70  E-value=0.043  Score=38.47  Aligned_cols=101  Identities=23%  Similarity=0.302  Sum_probs=65.7

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      ....+.++++++-.|.  |.|..+..+++..+ .+|++++.++...+.+++   .++...+ ..... +....... ..+
T Consensus        13 ~~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~~~~-~~~~~~~~-~~~   87 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNI-VIVEG-DAPEALED-SLP   87 (124)
T ss_pred             HHcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCce-EEEec-cccccChh-hcC
Confidence            3345667889999984  55999999998765 599999999887777652   2343322 11111 11111111 113


Q ss_pred             CccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426          150 GIDIYFENVGG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       150 ~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                      .+|+|+-....    ..++.+.+.|+++|+++..
T Consensus        88 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        88 EPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             CCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence            69999876542    2678899999999998864

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.69  E-value=0.033  Score=45.35  Aligned_cols=95  Identities=18%  Similarity=0.125  Sum_probs=65.8

Q ss_pred             ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhH
Q 042426           60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDL  139 (270)
Q Consensus        60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  139 (270)
                      -+|+........+.+..---.|.+++|.|.+.-+|.-++.++...|++|++..+...                     ++
T Consensus       137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l  195 (286)
T PRK14175        137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM  195 (286)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence            356555555555533322236889999999666999999999999999988874321                     23


Q ss_pred             HHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEccc
Q 042426          140 DAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       140 ~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      .+.+++     +|+||.++|.+ .+..  +.++++..++.+|..
T Consensus       196 ~~~~~~-----ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~  232 (286)
T PRK14175        196 ASYLKD-----ADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT  232 (286)
T ss_pred             HHHHhh-----CCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence            333333     89999999986 3333  457888888888874

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.68  E-value=0.028  Score=43.94  Aligned_cols=98  Identities=13%  Similarity=0.096  Sum_probs=63.8

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce--------------eecCCchhHHHHHH
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA--------------FNYKEEPDLDAALN  144 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--------------i~~~~~~~~~~~i~  144 (270)
                      .++.+||+.|  +|.|.-++.+|. +|.+|++++.|+.-.+.+.++.+....              ++.... |+.+. .
T Consensus        33 ~~~~rvLd~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-D~~~~-~  107 (213)
T TIGR03840        33 PAGARVFVPL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCG-DFFAL-T  107 (213)
T ss_pred             CCCCeEEEeC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEc-cCCCC-C
Confidence            5677999998  788888888885 699999999999988875434443210              110000 11100 0


Q ss_pred             hHcCCCccEEEeCCCc---------chHHHHHHccccCCEEEEEcc
Q 042426          145 RCFPEGIDIYFENVGG---------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       145 ~~~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ....+.||.++|+..-         ..+....++|+|+|+++..+.
T Consensus       108 ~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       108 AADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             cccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence            0001258999997641         257789999999998776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=96.67  E-value=0.013  Score=47.42  Aligned_cols=79  Identities=16%  Similarity=0.226  Sum_probs=49.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHhC----CC---ceeecCCchhH----HHHHHhHc--
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKHKFG----FD---DAFNYKEEPDL----DAALNRCF--  147 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~~~g----~~---~vi~~~~~~~~----~~~i~~~~--  147 (270)
                      .+++|+||++++|+.+++.+...|++|+++++. +++.+.+.+++.    ..   ...|..+.+..    .+.+.+..  
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            478999999999999999999999999998653 445444432332    11   12244443122    12222221  


Q ss_pred             CCCccEEEeCCCc
Q 042426          148 PEGIDIYFENVGG  160 (270)
Q Consensus       148 ~~~~d~v~d~~g~  160 (270)
                      .+++|+++.++|.
T Consensus        82 ~g~iD~lv~nAG~   94 (267)
T TIGR02685        82 FGRCDVLVNNASA   94 (267)
T ss_pred             cCCceEEEECCcc
Confidence            2369999999873

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=96.66  E-value=0.013  Score=49.49  Aligned_cols=77  Identities=17%  Similarity=0.239  Sum_probs=49.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----C-ceeecCCchhHHHHHHhHcCCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF----D-DAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~----~-~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      ++.+|||+||+|.+|..+++.+...|.+|+++.++........+.++.    . ...|..+..++.+.+.+.   ++|+|
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---~~d~v   79 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF---KPEIV   79 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc---CCCEE
Confidence            467899999999999999999998999999998766543322112221    1 112333331232323221   58999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      |.+++
T Consensus        80 ih~A~   84 (349)
T TIGR02622        80 FHLAA   84 (349)
T ss_pred             EECCc
Confidence            99987

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.66  E-value=0.013  Score=43.35  Aligned_cols=87  Identities=9%  Similarity=0.099  Sum_probs=56.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|+|.|| |.+|..-++.+...|++|+++.  ++..+.+. +++.- .++.+   .+.+.    .-.++|+|+-+++
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i-~~~~~---~~~~~----dl~~a~lViaaT~   79 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYI-TWKQK---TFSND----DIKDAHLIYAATN   79 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCc-EEEec---ccChh----cCCCceEEEECCC
Confidence            3678999998 9999998888888899999884  44444454 44321 12222   12111    1125899999999


Q ss_pred             cchHHHHHHccccCCEEEE
Q 042426          160 GKMLDAVLLNMRICGHIAV  178 (270)
Q Consensus       160 ~~~~~~~~~~l~~~G~~v~  178 (270)
                      .+..+..+...+..+.++.
T Consensus        80 d~e~N~~i~~~a~~~~~vn   98 (157)
T PRK06719         80 QHAVNMMVKQAAHDFQWVN   98 (157)
T ss_pred             CHHHHHHHHHHHHHCCcEE
Confidence            8877766665555444444

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=96.66  E-value=0.014  Score=46.87  Aligned_cols=43  Identities=30%  Similarity=0.342  Sum_probs=34.2

Q ss_pred             EEEEecCCchHHHHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHh
Q 042426           83 YVYVSAASGAVGQLVGQFVKL----VGCYVVGSARSKEKVDLLKHKF  125 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~----~g~~v~~~~~~~~~~~~~~~~~  125 (270)
                      .++|+|+++++|..++..+..    .|++|+.+.+++++.+.+.+++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l   48 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI   48 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence            589999999999987765543    6999999999988776665444

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.66  E-value=0.019  Score=46.20  Aligned_cols=80  Identities=15%  Similarity=0.177  Sum_probs=49.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHc--C
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS----KEKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCF--P  148 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~----~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~  148 (270)
                      +.+++|+|++|++|..+++.+...|++|++++++    .++.+.+.+   ..+..   ...|..+..+..+.+.+..  .
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF   87 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence            5689999999999999999998899997776532    222222221   22322   1235554423333333322  1


Q ss_pred             CCccEEEeCCCc
Q 042426          149 EGIDIYFENVGG  160 (270)
Q Consensus       149 ~~~d~v~d~~g~  160 (270)
                      +++|+++.++|.
T Consensus        88 ~~id~li~~ag~   99 (257)
T PRK12744         88 GRPDIAINTVGK   99 (257)
T ss_pred             CCCCEEEECCcc
Confidence            368999999884

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.66  E-value=0.014  Score=46.54  Aligned_cols=78  Identities=19%  Similarity=0.162  Sum_probs=49.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      .+++|+|+++++|..+++.+...|++|+++. +++++.+.+.++   .+..   ...|..+..++.+.+.+..  .+++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999999988899988765 444444333212   2322   1124343323443333322  13689


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      +++.++|
T Consensus        83 ~li~~ag   89 (248)
T PRK06947         83 ALVNNAG   89 (248)
T ss_pred             EEEECCc
Confidence            9999887

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.65  E-value=0.011  Score=52.49  Aligned_cols=73  Identities=15%  Similarity=0.134  Sum_probs=53.3

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      +.++++|+|+|. |..|++++++++..|++|++++..+...+.++ +.|.. ++...   ...+.+.     .+|+|+.+
T Consensus         9 ~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~-~~~~~---~~~~~l~-----~~D~VV~S   77 (488)
T PRK03369          9 LLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVA-TVSTS---DAVQQIA-----DYALVVTS   77 (488)
T ss_pred             ccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCE-EEcCc---chHhHhh-----cCCEEEEC
Confidence            557889999997 99999999999999999999997766666666 66764 22211   1122232     37999999


Q ss_pred             CCcc
Q 042426          158 VGGK  161 (270)
Q Consensus       158 ~g~~  161 (270)
                      .|-+
T Consensus        78 pGi~   81 (488)
T PRK03369         78 PGFR   81 (488)
T ss_pred             CCCC
Confidence            8853

>PLN03139 formate dehydrogenase; Provisional

Probab=96.65  E-value=0.052  Score=46.32  Aligned_cols=89  Identities=27%  Similarity=0.270  Sum_probs=63.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|...++.++.+|++|++..++....+... +.|+..    .+  ++.+.+.+     .|+|+-+..
T Consensus       198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~----~~--~l~ell~~-----sDvV~l~lP  264 (386)
T PLN03139        198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKF----EE--DLDAMLPK-----CDVVVINTP  264 (386)
T ss_pred             CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCcee----cC--CHHHHHhh-----CCEEEEeCC
Confidence            4679999996 99999999999999999999887643333333 455421    11  44444433     799988776


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEcc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      . +     .-...+..|+++..+|.++.
T Consensus       265 lt~~T~~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        265 LTEKTRGMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             CCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence            3 2     22467889999999999876

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=96.64  E-value=0.015  Score=46.23  Aligned_cols=78  Identities=14%  Similarity=0.115  Sum_probs=50.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCccE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGIDI  153 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~  153 (270)
                      +++|+|++|++|...++.+...|++|+++ .+++++.+...++   .+..   ...|..+.+++.+.+.+..  .+++|+
T Consensus         3 ~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~   82 (247)
T PRK09730          3 IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAA   82 (247)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence            69999999999999999888889998875 4555544433212   2321   2235555424444444332  237899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      ++.+.|.
T Consensus        83 vi~~ag~   89 (247)
T PRK09730         83 LVNNAGI   89 (247)
T ss_pred             EEECCCC
Confidence            9999984

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.63  E-value=0.0026  Score=52.10  Aligned_cols=146  Identities=21%  Similarity=0.263  Sum_probs=77.5

Q ss_pred             CCCCCEEEecccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHH
Q 042426           20 YKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQ   99 (270)
Q Consensus        20 ~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~   99 (270)
                      +++|++.+...+|.++-.-+.+. ++.+ ..+  +.|....=+..- ....++.+.  ..+|++||=.|  +|.|..++-
T Consensus       108 ~~vg~~~~I~P~w~~~~~~~~~~-~I~i-dPg--~AFGTG~H~TT~-lcl~~l~~~--~~~g~~vLDvG--~GSGILaia  178 (295)
T PF06325_consen  108 IRVGDRLVIVPSWEEYPEPPDEI-VIEI-DPG--MAFGTGHHPTTR-LCLELLEKY--VKPGKRVLDVG--CGSGILAIA  178 (295)
T ss_dssp             EEECTTEEEEETT----SSTTSE-EEEE-STT--SSS-SSHCHHHH-HHHHHHHHH--SSTTSEEEEES---TTSHHHHH
T ss_pred             EEECCcEEEECCCcccCCCCCcE-EEEE-CCC--CcccCCCCHHHH-HHHHHHHHh--ccCCCEEEEeC--CcHHHHHHH
Confidence            45566666666666662223344 5556 334  343222112111 111223222  57789999998  566666655


Q ss_pred             HHHHcCC-EEEEEeCCHHHHHHHHHH---hCCCceee-cCCchhHHHHHHhHcCCCccEEEeCCCcc----hHHHHHHcc
Q 042426          100 FVKLVGC-YVVGSARSKEKVDLLKHK---FGFDDAFN-YKEEPDLDAALNRCFPEGIDIYFENVGGK----MLDAVLLNM  170 (270)
Q Consensus       100 la~~~g~-~v~~~~~~~~~~~~~~~~---~g~~~vi~-~~~~~~~~~~i~~~~~~~~d~v~d~~g~~----~~~~~~~~l  170 (270)
                      .++ +|+ +|++++.++...+.+++-   -|...-+. .... +.       ..+.||+|+-..-..    ......+++
T Consensus       179 A~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~-~~-------~~~~~dlvvANI~~~vL~~l~~~~~~~l  249 (295)
T PF06325_consen  179 AAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE-DL-------VEGKFDLVVANILADVLLELAPDIASLL  249 (295)
T ss_dssp             HHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS-CT-------CCS-EEEEEEES-HHHHHHHHHHCHHHE
T ss_pred             HHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec-cc-------ccccCCEEEECCCHHHHHHHHHHHHHhh
Confidence            555 488 899999888766666521   22221111 1111 11       114699999877654    344556688


Q ss_pred             ccCCEEEEEcccc
Q 042426          171 RICGHIAVCGMIS  183 (270)
Q Consensus       171 ~~~G~~v~~g~~~  183 (270)
                      +++|.++..|...
T Consensus       250 ~~~G~lIlSGIl~  262 (295)
T PF06325_consen  250 KPGGYLILSGILE  262 (295)
T ss_dssp             EEEEEEEEEEEEG
T ss_pred             CCCCEEEEccccH
Confidence            9999999998854

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK06123 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.022  Score=45.38  Aligned_cols=80  Identities=16%  Similarity=0.196  Sum_probs=50.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      +.+++|+|++|++|..+++.+...|++|+... +++++.+.+.+   ..+..   ...|..+..++.+.+.+...  +.+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            35799999999999999998888899887765 34444333321   22332   12344444234444433221  368


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+++.+.|.
T Consensus        82 d~li~~ag~   90 (248)
T PRK06123         82 DALVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.62  E-value=0.015  Score=48.26  Aligned_cols=81  Identities=19%  Similarity=0.196  Sum_probs=50.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc-CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF-PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~-~~~~  151 (270)
                      .+.+++|+|+++++|...++.+...|++|++.+++. ++.+.+.++   .|..   ...|..+.++..+.+.+.. .+++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            357899999999999999998888899999987642 333332222   2322   1123444312222222211 2469


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus        91 D~li~nAG~   99 (306)
T PRK07792         91 DIVVNNAGI   99 (306)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.60  E-value=0.028  Score=47.01  Aligned_cols=93  Identities=15%  Similarity=0.110  Sum_probs=63.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHh----CCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFV-KLVGC-YVVGSARSKEKVDLLKHKF----GFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la-~~~g~-~v~~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      ...+++|+|+ |..|.+.+..+ ...++ +|.+..+++++.+.+.+++    +.. +..+.   ++.+.+.     ..|+
T Consensus       126 ~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aDi  195 (325)
T PRK08618        126 DAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EADI  195 (325)
T ss_pred             CCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCCE
Confidence            4568999996 99998777554 45677 8888899988877665444    332 22222   4444443     3899


Q ss_pred             EEeCCCcchHHHHHHccccCCEEEEEcccc
Q 042426          154 YFENVGGKMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       154 v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      |+.|++...-... ..++++-++..+|...
T Consensus       196 Vi~aT~s~~p~i~-~~l~~G~hV~~iGs~~  224 (325)
T PRK08618        196 IVTVTNAKTPVFS-EKLKKGVHINAVGSFM  224 (325)
T ss_pred             EEEccCCCCcchH-HhcCCCcEEEecCCCC
Confidence            9999987533334 8889998998998743

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.019  Score=45.67  Aligned_cols=80  Identities=21%  Similarity=0.264  Sum_probs=49.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--C
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR----SKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--P  148 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~----~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~  148 (270)
                      +.+++|+||+|++|+..++.+...|++|+++.+    +.++.+.+.+++   +..   ...|..+.....+.+.+..  .
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF   85 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            468999999999999999988889999988654    333333332222   222   1234444323333333221  1


Q ss_pred             CCccEEEeCCCc
Q 042426          149 EGIDIYFENVGG  160 (270)
Q Consensus       149 ~~~d~v~d~~g~  160 (270)
                      +++|.++.++|.
T Consensus        86 ~~~d~vi~~ag~   97 (249)
T PRK12827         86 GRLDILVNNAGI   97 (249)
T ss_pred             CCCCEEEECCCC
Confidence            368999999873

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=96.59  E-value=0.012  Score=49.06  Aligned_cols=75  Identities=19%  Similarity=0.353  Sum_probs=49.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-C--ce--eecCCchhHHHHHHhHcCCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF-D--DA--FNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~-~--~v--i~~~~~~~~~~~i~~~~~~~~  151 (270)
                      .+.++||+||+|.+|..+++.+...|++|++++++..+.+...+..   +. .  ..  .|..+..++.+.+.     ++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~   78 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-----GC   78 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-----CC
Confidence            3678999999999999999999888999998887765433222111   11 1  11  24444312333332     38


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |+|+.+++
T Consensus        79 d~vih~A~   86 (325)
T PLN02989         79 ETVFHTAS   86 (325)
T ss_pred             CEEEEeCC
Confidence            99999987

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.58  E-value=0.093  Score=40.59  Aligned_cols=80  Identities=19%  Similarity=0.270  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+++|.|. |.+|..+++.+...|++|+++++++++.+.+.+.+|+. .++..+   +   +.    ..+|+++.|..
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~---l---~~----~~~Dv~vp~A~   94 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPEE---I---YS----VDADVFAPCAL   94 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcchh---h---cc----ccCCEEEeccc
Confidence            4678999998 89999999999999999999998888888777566643 333211   1   10    13888886654


Q ss_pred             cc-hHHHHHHccc
Q 042426          160 GK-MLDAVLLNMR  171 (270)
Q Consensus       160 ~~-~~~~~~~~l~  171 (270)
                      +. .....++.++
T Consensus        95 ~~~I~~~~~~~l~  107 (200)
T cd01075          95 GGVINDDTIPQLK  107 (200)
T ss_pred             ccccCHHHHHHcC
Confidence            43 3344445553

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02244 tocopherol O-methyltransferase

Probab=96.58  E-value=0.021  Score=48.06  Aligned_cols=98  Identities=14%  Similarity=0.141  Sum_probs=65.0

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCCccEEE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      +++++||=+|  +|.|..+..+++..|++|++++.++...+.+++.   .+...-+..... +... + ....+.||+|+
T Consensus       117 ~~~~~VLDiG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~-~-~~~~~~FD~V~  191 (340)
T PLN02244        117 KRPKRIVDVG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN-Q-PFEDGQFDLVW  191 (340)
T ss_pred             CCCCeEEEec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc-C-CCCCCCccEEE
Confidence            6788999888  6778888899988899999999999877766522   233211222111 1111 0 01123699998


Q ss_pred             eCCCc-------chHHHHHHccccCCEEEEEcc
Q 042426          156 ENVGG-------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       156 d~~g~-------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .....       ..+..+.+.|+|||+++...+
T Consensus       192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            64331       267788999999999987654

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=96.57  E-value=0.049  Score=46.11  Aligned_cols=98  Identities=17%  Similarity=0.181  Sum_probs=64.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHhCCCceeecCCc--hhHHH--------------
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLV--GCYVVGSA--RSKEKVDLLKHKFGFDDAFNYKEE--PDLDA--------------  141 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~--~~~~~~~~~~~~~g~~~vi~~~~~--~~~~~--------------  141 (270)
                      .+|.|.|+||++|..++...+..  .++|++.+  ++.+++....++++...+.-..+.  ..+.+              
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~   81 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE   81 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence            47999999999999999988765  56888886  344455544457887655433321  01111              


Q ss_pred             HHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEE
Q 042426          142 ALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       142 ~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  179 (270)
                      .+.+.... .+|+|+.++++ ..+...+..++.|-++.+.
T Consensus        82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA  121 (385)
T PRK05447         82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA  121 (385)
T ss_pred             HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence            11222222 58999999977 4677788888888776664

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.57  E-value=0.048  Score=42.35  Aligned_cols=89  Identities=20%  Similarity=0.152  Sum_probs=57.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      |.+|+|.|+ |.+|..-++.+...|++|++++.... ....+. +.|- ..+-.++. . ...+     .++++|+-+++
T Consensus         9 gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~-i~~~~~~~-~-~~dl-----~~~~lVi~at~   78 (205)
T TIGR01470         9 GRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGG-ITWLARCF-D-ADIL-----EGAFLVIAATD   78 (205)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCC-EEEEeCCC-C-HHHh-----CCcEEEEECCC
Confidence            578999998 99999999999999999999886432 333333 2231 11111222 1 1111     25899999999


Q ss_pred             cc-hHHHHHHccccCCEEEEE
Q 042426          160 GK-MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       160 ~~-~~~~~~~~l~~~G~~v~~  179 (270)
                      .+ .-.......+..|.++.+
T Consensus        79 d~~ln~~i~~~a~~~~ilvn~   99 (205)
T TIGR01470        79 DEELNRRVAHAARARGVPVNV   99 (205)
T ss_pred             CHHHHHHHHHHHHHcCCEEEE
Confidence            86 444555555666777754

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK07023 short chain dehydrogenase; Provisional

Probab=96.57  E-value=0.016  Score=46.10  Aligned_cols=75  Identities=20%  Similarity=0.224  Sum_probs=48.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHh----H-cC-CCccE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNR----C-FP-EGIDI  153 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~----~-~~-~~~d~  153 (270)
                      +++|+|++|++|..+++.+...|++|++++++.++. ... ..+..   ...|..+..++...+.+    . .. +..|+
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            699999999999999999888899999999875532 222 33322   12355544233332222    1 22 26788


Q ss_pred             EEeCCC
Q 042426          154 YFENVG  159 (270)
Q Consensus       154 v~d~~g  159 (270)
                      ++.+.|
T Consensus        81 ~v~~ag   86 (243)
T PRK07023         81 LINNAG   86 (243)
T ss_pred             EEEcCc
Confidence            888876

>PLN00203 glutamyl-tRNA reductase

Probab=96.55  E-value=0.068  Score=47.51  Aligned_cols=74  Identities=27%  Similarity=0.394  Sum_probs=52.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +.+|+|+|+ |.+|.++++.+...|+ +|+++.++.++.+.+.++++... +......+..+.+.     ++|+||.|++
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~-i~~~~~~dl~~al~-----~aDVVIsAT~  338 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVE-IIYKPLDEMLACAA-----EADVVFTSTS  338 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCc-eEeecHhhHHHHHh-----cCCEEEEccC
Confidence            578999998 9999999999998997 89999999998887775664211 11111102323332     3899999987


Q ss_pred             cc
Q 042426          160 GK  161 (270)
Q Consensus       160 ~~  161 (270)
                      ..
T Consensus       339 s~  340 (519)
T PLN00203        339 SE  340 (519)
T ss_pred             CC
Confidence            63

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.55  E-value=0.036  Score=45.99  Aligned_cols=89  Identities=18%  Similarity=0.285  Sum_probs=60.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .+|.|+|+ |.+|.+.+..++..|.  +|++..+++++.+.++ +.|....+.   . +..+.+.     .+|+|+.|+.
T Consensus         7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~---~-~~~~~~~-----~aDvViiavp   75 (307)
T PRK07502          7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVT---T-SAAEAVK-----GADLVILCVP   75 (307)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceec---C-CHHHHhc-----CCCEEEECCC
Confidence            57999996 9999999998888885  8999999988888887 677521111   1 2222222     3899999987


Q ss_pred             cch----HHHHHHccccCCEEEEEcc
Q 042426          160 GKM----LDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~~~----~~~~~~~l~~~G~~v~~g~  181 (270)
                      ...    +......++++..++.++.
T Consensus        76 ~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         76 VGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            643    3333345566666666654

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.53  E-value=0.14  Score=39.40  Aligned_cols=102  Identities=18%  Similarity=0.237  Sum_probs=63.2

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      ...+++++++||=.|  +|.|..++.+++.. +.+|+++..+++..+.+++   +++..++ ..... +..+.+..... 
T Consensus        34 ~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v-~~~~~-d~~~~~~~~~~-  108 (196)
T PRK07402         34 SQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNV-EVIEG-SAPECLAQLAP-  108 (196)
T ss_pred             HhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCe-EEEEC-chHHHHhhCCC-
Confidence            445677889988887  56666677777654 5699999999988777763   3454432 12111 33332322221 


Q ss_pred             CccE-EEeCCCc--chHHHHHHccccCCEEEEEc
Q 042426          150 GIDI-YFENVGG--KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       150 ~~d~-v~d~~g~--~~~~~~~~~l~~~G~~v~~g  180 (270)
                      .+|. +++....  ..++.+.+.|+++|+++...
T Consensus       109 ~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        109 APDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            2344 4443222  46788899999999988763

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=96.52  E-value=0.019  Score=45.62  Aligned_cols=79  Identities=16%  Similarity=0.191  Sum_probs=49.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhC---CC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFG---FD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g---~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      .+++|+|++|++|..+++.+...|++|+++.++.. ..+...+...   ..   ...|..+.....+.+.+..  .+.+|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            37999999999999999988888999999998743 2222221222   11   1234444323333333321  13589


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      +++.+.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12824         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK07578 short chain dehydrogenase; Provisional

Probab=96.52  E-value=0.035  Score=42.74  Aligned_cols=63  Identities=21%  Similarity=0.288  Sum_probs=43.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +++|.|+++++|..++..+... .+|+++++++.           ....|..+.++..+.+.+.  +++|+++.+.|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~id~lv~~ag   64 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKV--GKVDAVVSAAG   64 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhc--CCCCEEEECCC
Confidence            6899999999999888877766 89999987642           1123444442333333332  35889988887

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.52  E-value=0.046  Score=45.43  Aligned_cols=88  Identities=16%  Similarity=0.125  Sum_probs=62.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|...++.++.+|++|++..++.++..      +.....  ... ++.+.+.+     .|+|+.+..
T Consensus       135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~--~~~-~l~e~l~~-----aDvvv~~lP  199 (312)
T PRK15469        135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA--GRE-ELSAFLSQ-----TRVLINLLP  199 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec--ccc-cHHHHHhc-----CCEEEECCC
Confidence            4679999997 99999999999999999999886543211      111111  111 44444443     899999887


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEccc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      . +     .-...++.|+++..++.++..
T Consensus       200 lt~~T~~li~~~~l~~mk~ga~lIN~aRG  228 (312)
T PRK15469        200 NTPETVGIINQQLLEQLPDGAYLLNLARG  228 (312)
T ss_pred             CCHHHHHHhHHHHHhcCCCCcEEEECCCc
Confidence            4 2     224578899999999998873

>PLN02928 oxidoreductase family protein

Probab=96.50  E-value=0.087  Score=44.49  Aligned_cols=93  Identities=19%  Similarity=0.182  Sum_probs=63.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-----Cceee--cCCchhHHHHHHhHcCCCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF-----DDAFN--YKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~-----~~vi~--~~~~~~~~~~i~~~~~~~~d  152 (270)
                      .|.++.|+|. |.+|+.+++.++.+|++|++..++...... . .++.     ....+  .... ++.+.+.+     .|
T Consensus       158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~-~L~ell~~-----aD  228 (347)
T PLN02928        158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPE-D-GLLIPNGDVDDLVDEKGGHE-DIYEFAGE-----AD  228 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhh-h-hhccccccccccccccCccc-CHHHHHhh-----CC
Confidence            4789999997 999999999999999999999876322111 1 1110     00000  0111 45555544     89


Q ss_pred             EEEeCCCc-c-----hHHHHHHccccCCEEEEEcc
Q 042426          153 IYFENVGG-K-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       153 ~v~d~~g~-~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +|+.++.. +     .-...++.|+++..+|.++.
T Consensus       229 iVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaR  263 (347)
T PLN02928        229 IVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIAR  263 (347)
T ss_pred             EEEECCCCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence            99998863 1     23578889999999999876

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=96.50  E-value=0.017  Score=47.02  Aligned_cols=73  Identities=23%  Similarity=0.274  Sum_probs=46.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC----CCce--------eecCCchhHHHHHHhHcCC-
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFG----FDDA--------FNYKEEPDLDAALNRCFPE-  149 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g----~~~v--------i~~~~~~~~~~~i~~~~~~-  149 (270)
                      |||+||+|++|..+++.+..++. +++++++++.++-.+++++.    ...+        -|.++.    +.+.+.... 
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~----~~l~~~~~~~   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDK----ERLNRIFEEY   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHH----HHHHHHTT--
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCH----HHHHHHHhhc
Confidence            79999999999988887777775 89999999988877776662    1111        133333    344444444 


Q ss_pred             CccEEEeCCCc
Q 042426          150 GIDIYFENVGG  160 (270)
Q Consensus       150 ~~d~v~d~~g~  160 (270)
                      ++|+||.++.-
T Consensus        77 ~pdiVfHaAA~   87 (293)
T PF02719_consen   77 KPDIVFHAAAL   87 (293)
T ss_dssp             T-SEEEE----
T ss_pred             CCCEEEEChhc
Confidence            79999998874

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.49  E-value=0.11  Score=42.53  Aligned_cols=106  Identities=14%  Similarity=0.170  Sum_probs=73.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----CceeecCCchh---HHHHHHhHcCC-Cc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF----DDAFNYKEEPD---LDAALNRCFPE-GI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~---~~~~i~~~~~~-~~  151 (270)
                      ++..|+|+|..+|.|..++.-+...|.+|++.|-.++..+.++.+...    +--+|..++++   ..+.+++..+. +.
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL  107 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL  107 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence            355799999999999999999999999999999887777777633311    12345554423   34455666655 77


Q ss_pred             cEEEeCCCcc---------------------------hHHHHHHcccc-CCEEEEEcccccc
Q 042426          152 DIYFENVGGK---------------------------MLDAVLLNMRI-CGHIAVCGMISQY  185 (270)
Q Consensus       152 d~v~d~~g~~---------------------------~~~~~~~~l~~-~G~~v~~g~~~~~  185 (270)
                      =-++|++|..                           .....+.++++ .||+|.+++..+.
T Consensus       108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR  169 (322)
T KOG1610|consen  108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR  169 (322)
T ss_pred             eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence            7889988821                           12334445554 5999999887653

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.49  E-value=0.03  Score=46.81  Aligned_cols=94  Identities=19%  Similarity=0.184  Sum_probs=62.5

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVK-LVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~-~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      -.+.+|+|+||+|.+|..+++.+. ..|. +++++.++.++...+.++++...+.      ++.+.+.     ..|+|+.
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~-----~aDiVv~  221 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALP-----EADIVVW  221 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHc-----cCCEEEE
Confidence            356899999999999998888775 4565 8999999888887776555422221      2333332     3899999


Q ss_pred             CCCcc-hHHHHHHccccCCEEEEEcccc
Q 042426          157 NVGGK-MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       157 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +++.. .+..-...+++.-.++.++.+-
T Consensus       222 ~ts~~~~~~I~~~~l~~~~~viDiAvPR  249 (340)
T PRK14982        222 VASMPKGVEIDPETLKKPCLMIDGGYPK  249 (340)
T ss_pred             CCcCCcCCcCCHHHhCCCeEEEEecCCC
Confidence            98863 2212223446666777777643

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=96.49  E-value=0.017  Score=48.12  Aligned_cols=75  Identities=24%  Similarity=0.371  Sum_probs=48.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--C-c--eeecCCchhHHHHHHhHcCCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF--D-D--AFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~--~-~--vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      .|.+|+|+||+|.+|..+++.+...|.+|+++.++..+.+.+.+..   +.  . .  ..|..+...+.+.+.     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~   78 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-----GC   78 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-----CC
Confidence            4679999999999999999988888999999888765433332111   11  1 1  123333312333332     38


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |+||.+++
T Consensus        79 d~vih~A~   86 (322)
T PLN02986         79 DAVFHTAS   86 (322)
T ss_pred             CEEEEeCC
Confidence            99999886

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.033  Score=43.66  Aligned_cols=76  Identities=16%  Similarity=0.244  Sum_probs=50.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CC-ceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-FD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .+++|+|++|.+|..++..+... .+|+++.++.++.+.+.++.. .. ...|..+..++.+.+...  +++|.++.++|
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ag   80 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNAG   80 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            47999999999999988877666 999999998877665553332 21 123444432333333221  25899999987


Q ss_pred             c
Q 042426          160 G  160 (270)
Q Consensus       160 ~  160 (270)
                      .
T Consensus        81 ~   81 (227)
T PRK08219         81 V   81 (227)
T ss_pred             c
Confidence            4

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=96.48  E-value=0.016  Score=47.48  Aligned_cols=95  Identities=11%  Similarity=0.098  Sum_probs=61.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcC-CC-ccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFP-EG-IDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~-~~-~d~v~d~~g  159 (270)
                      +|+|+||+|.+|..+++.+...|.+|.+.+|++++..    ..+.. ...|+.+.+.+.+.++.... .+ +|.+|-+.+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            4899999999999999998888999999999876532    22332 23466665344444432211 25 899987776


Q ss_pred             cc-----hHHHHHHccccCC--EEEEEcc
Q 042426          160 GK-----MLDAVLLNMRICG--HIAVCGM  181 (270)
Q Consensus       160 ~~-----~~~~~~~~l~~~G--~~v~~g~  181 (270)
                      ..     .....++.++..|  ++|.++.
T Consensus        77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence            31     2334444444444  7887764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=96.48  E-value=0.022  Score=45.41  Aligned_cols=106  Identities=14%  Similarity=0.223  Sum_probs=67.1

Q ss_pred             hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHH-HHHHh
Q 042426           72 LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLD-AALNR  145 (270)
Q Consensus        72 l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~-~~i~~  145 (270)
                      +....++.||++|+=-|  .|.|.+...+++..|  -+|+....+++..+.+++.   .|....+..... |.. +.+.+
T Consensus        32 I~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~  108 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDE  108 (247)
T ss_dssp             HHHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--ST
T ss_pred             HHHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccc
Confidence            43567899999998877  667888888888776  3999999999988777643   455432222221 221 12211


Q ss_pred             HcCCCccEEEeCCCcc--hHHHHHHcc-ccCCEEEEEc
Q 042426          146 CFPEGIDIYFENVGGK--MLDAVLLNM-RICGHIAVCG  180 (270)
Q Consensus       146 ~~~~~~d~v~d~~g~~--~~~~~~~~l-~~~G~~v~~g  180 (270)
                      ...+.+|.||==...+  .+..+.+.| +++|+++.+.
T Consensus       109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs  146 (247)
T PF08704_consen  109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS  146 (247)
T ss_dssp             T-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred             cccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence            1123588887655554  889999999 8999998873

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.47  E-value=0.039  Score=48.13  Aligned_cols=45  Identities=20%  Similarity=0.389  Sum_probs=36.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF  127 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~  127 (270)
                      +|.|+||.|.+|.+.+..++..|.+|++.++++++.....+++|.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv   46 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGV   46 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCC
Confidence            589999789999999999999999999999887775333326664

>PRK06924 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.024  Score=45.30  Aligned_cols=41  Identities=20%  Similarity=0.386  Sum_probs=34.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLK  122 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~  122 (270)
                      .+++|+|++|++|..+++.+...|++|+++++++ ++.+.+.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   43 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA   43 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH
Confidence            3699999999999999999888899999999876 4444443

>PRK04457 spermidine synthase; Provisional

Probab=96.46  E-value=0.066  Score=43.34  Aligned_cols=96  Identities=10%  Similarity=0.133  Sum_probs=64.7

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcCCCccEE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      .++.+||++|  +|.|..+..+++.. +.+++++..+++-.+.+++.++..   .-+..... |..+.+.+. ++.||+|
T Consensus        65 ~~~~~vL~IG--~G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~~-~~~yD~I  140 (262)
T PRK04457         65 PRPQHILQIG--LGGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAVH-RHSTDVI  140 (262)
T ss_pred             CCCCEEEEEC--CCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHhC-CCCCCEE
Confidence            3457899999  45688888888776 469999999999999888555531   11112222 444444432 3468988


Q ss_pred             E-eCCC----------cchHHHHHHccccCCEEEE
Q 042426          155 F-ENVG----------GKMLDAVLLNMRICGHIAV  178 (270)
Q Consensus       155 ~-d~~g----------~~~~~~~~~~l~~~G~~v~  178 (270)
                      + |...          .+.++.+.+.|+|+|+++.
T Consensus       141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi  175 (262)
T PRK04457        141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV  175 (262)
T ss_pred             EEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence            6 3221          1367888999999999986

>PRK01581 speE spermidine synthase; Validated

Probab=96.45  E-value=0.08  Score=44.57  Aligned_cols=97  Identities=12%  Similarity=0.110  Sum_probs=62.3

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC---------C-CceeecCCchhHHHHHHhHc
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFG---------F-DDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g---------~-~~vi~~~~~~~~~~~i~~~~  147 (270)
                      ....+|||+|  ||.|..+..++++.+. +|+++..+++-.+.++ ++.         . +.-+..... |..+.+.. .
T Consensus       149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~-~  223 (374)
T PRK01581        149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS-P  223 (374)
T ss_pred             CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-c
Confidence            3446899999  5677777888887654 9999999988888887 421         1 111111111 33344433 3


Q ss_pred             CCCccEEEeCCCc------------chHHHHHHccccCCEEEEEc
Q 042426          148 PEGIDIYFENVGG------------KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       148 ~~~~d~v~d~~g~------------~~~~~~~~~l~~~G~~v~~g  180 (270)
                      .+.||+||--...            +.++.+.+.|+|+|.++.-.
T Consensus       224 ~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs  268 (374)
T PRK01581        224 SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS  268 (374)
T ss_pred             CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            3479998654321            15678899999999987653

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.44  E-value=0.027  Score=45.28  Aligned_cols=34  Identities=21%  Similarity=0.174  Sum_probs=29.8

Q ss_pred             CcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 042426           81 GEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        81 g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      +.+++|+||+  |++|...+..+...|++|++++++
T Consensus         5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            4689999998  489999998888889999999876

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=96.42  E-value=0.017  Score=45.35  Aligned_cols=98  Identities=12%  Similarity=0.061  Sum_probs=62.6

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce--------------eecCCchhHHHH
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA--------------FNYKEEPDLDAA  142 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--------------i~~~~~~~~~~~  142 (270)
                      .+.++.+||+.|  +|.|.-++.||. +|++|++++.++...+.+.++.+....              ++.... |+.+.
T Consensus        34 ~~~~~~rvL~~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-D~~~l  109 (218)
T PRK13255         34 ALPAGSRVLVPL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG-DFFAL  109 (218)
T ss_pred             CCCCCCeEEEeC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC-cccCC
Confidence            345678999998  788988888886 699999999999988766434443210              111001 11110


Q ss_pred             HHhHcCCCccEEEeCCC---------cchHHHHHHccccCCEEEEE
Q 042426          143 LNRCFPEGIDIYFENVG---------GKMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       143 i~~~~~~~~d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~  179 (270)
                       .....+.||.|+|...         ...+....++|+|+|++..+
T Consensus       110 -~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        110 -TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             -CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence             0001125899999664         12578888999999875543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=96.40  E-value=0.025  Score=47.88  Aligned_cols=76  Identities=22%  Similarity=0.236  Sum_probs=50.4

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--CC-ce--eecCCchhHHHHHHhHcCCCccE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG--FD-DA--FNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g--~~-~v--i~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      ..+.+|||+|++|.+|..+++.+...|.+|+++.++.++.+.+.+.+.  .. ..  .|..+...+.+.+.     ++|.
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~   82 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-----GCDG   82 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-----CCCE
Confidence            456789999999999999999998889999999887765554432321  11 11  23333212222222     3899


Q ss_pred             EEeCCC
Q 042426          154 YFENVG  159 (270)
Q Consensus       154 v~d~~g  159 (270)
                      ||.+++
T Consensus        83 Vih~A~   88 (353)
T PLN02896         83 VFHVAA   88 (353)
T ss_pred             EEECCc
Confidence            999886

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.38  E-value=0.069  Score=42.19  Aligned_cols=91  Identities=14%  Similarity=0.209  Sum_probs=59.1

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCC----HHH--------HHHHHHHhCCCceeecCCchhHHHHH
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGC---YVVGSARS----KEK--------VDLLKHKFGFDDAFNYKEEPDLDAAL  143 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~---~v~~~~~~----~~~--------~~~~~~~~g~~~vi~~~~~~~~~~~i  143 (270)
                      -.+.+++|+|+ |+.|..++..+...|+   +++++.++    .++        .++++ .++... .+   . ++.+.+
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~~---~-~l~~~l   95 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-TG---G-TLKEAL   95 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-cc---C-CHHHHH
Confidence            35679999998 9999999998888897   48888887    333        22233 333211 11   1 343444


Q ss_pred             HhHcCCCccEEEeCCCcchH-HHHHHccccCCEEEEEcc
Q 042426          144 NRCFPEGIDIYFENVGGKML-DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       144 ~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~  181 (270)
                      .     ++|+++++++...+ ...++.++++..++.+.+
T Consensus        96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsn  129 (226)
T cd05311          96 K-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFALAN  129 (226)
T ss_pred             h-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCC
Confidence            2     38999999974333 466777777776665543

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=96.38  E-value=0.3  Score=40.15  Aligned_cols=91  Identities=12%  Similarity=0.038  Sum_probs=53.6

Q ss_pred             cEEEEecCCchHHHH-HHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           82 EYVYVSAASGAVGQL-VGQFVKLVGCYVVGSARSKE---KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~-ai~la~~~g~~v~~~~~~~~---~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      -++.|+| +|.+|.. +..+.+.-+.++.+++..+.   ..+.++ ++|.....  .   ++...+.+....++|+||++
T Consensus         5 lrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~-~~Gi~~~~--~---~ie~LL~~~~~~dIDiVf~A   77 (302)
T PRK08300          5 LKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARAR-RLGVATSA--E---GIDGLLAMPEFDDIDIVFDA   77 (302)
T ss_pred             CeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHH-HcCCCccc--C---CHHHHHhCcCCCCCCEEEEC
Confidence            3689999 5999986 44455555678887774432   234555 77754222  1   34444432111359999999


Q ss_pred             CCcc-hHHHHHHccccCCEEEEE
Q 042426          158 VGGK-MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       158 ~g~~-~~~~~~~~l~~~G~~v~~  179 (270)
                      ++.. ..+.+..+...|-+++..
T Consensus        78 T~a~~H~e~a~~a~eaGk~VID~  100 (302)
T PRK08300         78 TSAGAHVRHAAKLREAGIRAIDL  100 (302)
T ss_pred             CCHHHHHHHHHHHHHcCCeEEEC
Confidence            9986 444444454455455443

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=96.38  E-value=0.022  Score=44.93  Aligned_cols=74  Identities=16%  Similarity=0.249  Sum_probs=52.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      |||+||+|-+|..++..+...|.+|+...++..+......+.... ...|..+.+.+.+.+...   .+|.||.+++.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence            799999999999999999999999998888776655544233322 234555542444444443   48999999874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=96.36  E-value=0.023  Score=44.93  Aligned_cols=77  Identities=22%  Similarity=0.290  Sum_probs=48.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      ++|+|++|++|..+++.+...|++|+++.++. ++.+...+   ..+..   ...|..+..++.+.+.+..  .+++|.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999888899999998764 33322221   23421   2235554423333333221  1358999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      +.+.|.
T Consensus        81 i~~ag~   86 (239)
T TIGR01830        81 VNNAGI   86 (239)
T ss_pred             EECCCC
Confidence            998884

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.33  E-value=0.055  Score=44.01  Aligned_cols=96  Identities=20%  Similarity=0.174  Sum_probs=66.0

Q ss_pred             ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhH
Q 042426           60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDL  139 (270)
Q Consensus        60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  139 (270)
                      -+|+........|....---.|.+++|.|.+.-+|.-++.++...|++|++.-+                    ++. ++
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs--------------------~t~-~l  195 (285)
T PRK14189        137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHS--------------------KTR-DL  195 (285)
T ss_pred             CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecC--------------------CCC-CH
Confidence            345554444444533222236899999999888899999999999999887431                    112 34


Q ss_pred             HHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEccc
Q 042426          140 DAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       140 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      .+.+++     .|+|+-++|.+.+-. -+.++++..++.+|..
T Consensus       196 ~~~~~~-----ADIVV~avG~~~~i~-~~~ik~gavVIDVGin  232 (285)
T PRK14189        196 AAHTRQ-----ADIVVAAVGKRNVLT-ADMVKPGATVIDVGMN  232 (285)
T ss_pred             HHHhhh-----CCEEEEcCCCcCccC-HHHcCCCCEEEEcccc
Confidence            444443     899999999864422 3889999999998863

>PLN02686 cinnamoyl-CoA reductase

Probab=96.33  E-value=0.031  Score=47.63  Aligned_cols=44  Identities=16%  Similarity=0.160  Sum_probs=36.9

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK  122 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~  122 (270)
                      ..+.+|||+||+|.+|..+++.+...|++|+++.++.++.+.++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            44679999999999999999999989999999887766655444

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=96.32  E-value=0.06  Score=43.40  Aligned_cols=96  Identities=17%  Similarity=0.226  Sum_probs=63.0

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCCccEEE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      .++.+||-.|  +|.|..+..+++. |.+|++++.+++..+.+++..   |...-+..... +..+ +.....+.||+|+
T Consensus        43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~~-l~~~~~~~fD~V~  117 (255)
T PRK11036         43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQD-IAQHLETPVDLIL  117 (255)
T ss_pred             CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHHH-HhhhcCCCCCEEE
Confidence            4567888888  7788888888875 889999999998888777332   32111111111 2222 2222234699998


Q ss_pred             eCCC-----c--chHHHHHHccccCCEEEEE
Q 042426          156 ENVG-----G--KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       156 d~~g-----~--~~~~~~~~~l~~~G~~v~~  179 (270)
                      ....     .  ..+..+.+.|+|+|.++.+
T Consensus       118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        118 FHAVLEWVADPKSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             ehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence            5432     2  2678899999999999765

>PRK07574 formate dehydrogenase; Provisional

Probab=96.31  E-value=0.037  Score=47.23  Aligned_cols=89  Identities=16%  Similarity=0.136  Sum_probs=61.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|+.+++.++.+|.+|++..++....+..+ .+|...    ..  ++.+.+.+     .|+|+-+..
T Consensus       191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~----~~--~l~ell~~-----aDvV~l~lP  257 (385)
T PRK07574        191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTY----HV--SFDSLVSV-----CDVVTIHCP  257 (385)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCcee----cC--CHHHHhhc-----CCEEEEcCC
Confidence            3678999997 99999999999999999999997753333333 444321    11  34444433     788888776


Q ss_pred             c-c----h-HHHHHHccccCCEEEEEcc
Q 042426          160 G-K----M-LDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~-~----~-~~~~~~~l~~~G~~v~~g~  181 (270)
                      . +    . -...+..|+++..+|.++.
T Consensus       258 lt~~T~~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        258 LHPETEHLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             CCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence            3 2    1 2456778888888888765

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.29  E-value=0.049  Score=44.67  Aligned_cols=77  Identities=14%  Similarity=0.154  Sum_probs=46.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSK---EKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~---~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      ++.+++|+|+ ||.+.+++..+...|+ +++++.|++   ++.+.+.++++..  ..+..... +-.+.+.+.. ..+|+
T Consensus       123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~-~~~~~l~~~~-~~aDi  199 (288)
T PRK12749        123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL-ADQQAFAEAL-ASADI  199 (288)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEech-hhhhhhhhhc-ccCCE
Confidence            4568999997 8889987777777898 899999984   3555554455431  11111111 1011122111 24899


Q ss_pred             EEeCCC
Q 042426          154 YFENVG  159 (270)
Q Consensus       154 v~d~~g  159 (270)
                      |++|+.
T Consensus       200 vINaTp  205 (288)
T PRK12749        200 LTNGTK  205 (288)
T ss_pred             EEECCC
Confidence            999885

>PLN00016 RNA-binding protein; Provisional

Probab=96.28  E-value=0.038  Score=47.28  Aligned_cols=96  Identities=17%  Similarity=0.225  Sum_probs=60.4

Q ss_pred             CcEEEEe----cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----------HHhCCCceeecCCchhHHHHHHhH
Q 042426           81 GEYVYVS----AASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK----------HKFGFDDAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        81 g~~vlI~----ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~----------~~~g~~~vi~~~~~~~~~~~i~~~  146 (270)
                      ..+|||+    ||+|-+|..++..+...|.+|++++++......+.          ...+...+.  .   |+.+ +.+.
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~--~---D~~d-~~~~  125 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW--G---DPAD-VKSK  125 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE--e---cHHH-HHhh
Confidence            3579999    99999999999988888999999998765432211          022332221  1   2222 2222


Q ss_pred             cCC-CccEEEeCCCcc--hHHHHHHccccC--CEEEEEccc
Q 042426          147 FPE-GIDIYFENVGGK--MLDAVLLNMRIC--GHIAVCGMI  182 (270)
Q Consensus       147 ~~~-~~d~v~d~~g~~--~~~~~~~~l~~~--G~~v~~g~~  182 (270)
                      ... ++|+|+++.+..  .....++.++..  .+++.++..
T Consensus       126 ~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~  166 (378)
T PLN00016        126 VAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA  166 (378)
T ss_pred             hccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            223 699999998753  344455555433  378877654

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.26  E-value=0.0079  Score=41.13  Aligned_cols=86  Identities=19%  Similarity=0.305  Sum_probs=55.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|||.|+ |.+|..-++.+...|++|++++...   +..+   +.   +..... .+.+.+     .++++|+-+.+
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~---i~~~~~-~~~~~l-----~~~~lV~~at~   69 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE---GL---IQLIRR-EFEEDL-----DGADLVFAATD   69 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TS---CEEEES-S-GGGC-----TTESEEEE-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh---hH---HHHHhh-hHHHHH-----hhheEEEecCC
Confidence            3678999998 9999999999999999999999775   2222   11   112222 332111     25999999998


Q ss_pred             cchHHHHH-HccccCCEEEEEcc
Q 042426          160 GKMLDAVL-LNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~~~~~~~~-~~l~~~G~~v~~g~  181 (270)
                      .+.++..+ ...+..|.++....
T Consensus        70 d~~~n~~i~~~a~~~~i~vn~~D   92 (103)
T PF13241_consen   70 DPELNEAIYADARARGILVNVVD   92 (103)
T ss_dssp             -HHHHHHHHHHHHHTTSEEEETT
T ss_pred             CHHHHHHHHHHHhhCCEEEEECC
Confidence            87555444 45555788888754

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=96.26  E-value=0.033  Score=44.13  Aligned_cols=76  Identities=16%  Similarity=0.137  Sum_probs=47.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      ++|+|++|++|..+++.+...|++|++++++ +++.+.+.++   .+..   ...|..+..+....+.+..  .+..|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999899999988865 3333333222   2322   1234444423333333221  2357889


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      +.+.|
T Consensus        81 i~~ag   85 (239)
T TIGR01831        81 VLNAG   85 (239)
T ss_pred             EECCC
Confidence            88876

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.25  E-value=0.038  Score=46.86  Aligned_cols=80  Identities=14%  Similarity=0.115  Sum_probs=49.1

Q ss_pred             CCCcEEEEecCCchHHHH--HHHHHHHcCCEEEEEeCCHH--H-------------H-HHHHHHhCCC-ce--eecCCch
Q 042426           79 KKGEYVYVSAASGAVGQL--VGQFVKLVGCYVVGSARSKE--K-------------V-DLLKHKFGFD-DA--FNYKEEP  137 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~--ai~la~~~g~~v~~~~~~~~--~-------------~-~~~~~~~g~~-~v--i~~~~~~  137 (270)
                      ..+.++||+|+++++|++  .++.+ ..|++++++....+  +             . +.++ +.|.. ..  .|-.+..
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence            345799999999999999  56666 88999888874221  1             1 2233 55543 11  2444432


Q ss_pred             hHH---HHHHhHcCCCccEEEeCCCcc
Q 042426          138 DLD---AALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus       138 ~~~---~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      ...   +.+.+.. |++|+++++++.+
T Consensus       117 ~v~~lie~I~e~~-G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDL-GQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhc-CCCCEEEECCccC
Confidence            233   3333322 4699999999864

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.24  E-value=0.036  Score=44.61  Aligned_cols=80  Identities=15%  Similarity=0.169  Sum_probs=49.4

Q ss_pred             CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHHHHH---HhCCC---ceeecCCchhHH
Q 042426           80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARS-----------KEKVDLLKH---KFGFD---DAFNYKEEPDLD  140 (270)
Q Consensus        80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~-----------~~~~~~~~~---~~g~~---~vi~~~~~~~~~  140 (270)
                      +|.+++|+|++  +++|...++.+...|++|++++++           .++.+.+.+   +.|..   ...|..+.++..
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~   84 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK   84 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            46789999997  499999999999999999987532           122212211   33432   123444442444


Q ss_pred             HHHHhHcC--CCccEEEeCCC
Q 042426          141 AALNRCFP--EGIDIYFENVG  159 (270)
Q Consensus       141 ~~i~~~~~--~~~d~v~d~~g  159 (270)
                      +.+.+...  +..|+++.++|
T Consensus        85 ~~~~~~~~~~g~id~li~~ag  105 (256)
T PRK12859         85 ELLNKVTEQLGYPHILVNNAA  105 (256)
T ss_pred             HHHHHHHHHcCCCcEEEECCC
Confidence            44433322  35899999887

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.24  E-value=0.087  Score=42.86  Aligned_cols=94  Identities=19%  Similarity=0.138  Sum_probs=64.8

Q ss_pred             ccCchhhhHHHHhhhhcCCC-CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchh
Q 042426           60 ILGMPGLTAYGGLHELCSPK-KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPD  138 (270)
Q Consensus        60 ~l~~~~~ta~~~l~~~~~~~-~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  138 (270)
                      -+|+........|.. -++. .|.+++|.|.+.-+|.-++.++...|+.|++.-...                    . +
T Consensus       136 ~~PcTp~avi~lL~~-~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t--------------------~-~  193 (285)
T PRK14191        136 FVPATPMGVMRLLKH-YHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT--------------------K-D  193 (285)
T ss_pred             CCCCcHHHHHHHHHH-hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc--------------------H-H
Confidence            346555555555533 3343 589999999988999999999999999987753211                    1 3


Q ss_pred             HHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcc
Q 042426          139 LDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       139 ~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +.+.+++     .|+++-++|.+.+- .-+.++++..++.+|.
T Consensus       194 l~~~~~~-----ADIvV~AvG~p~~i-~~~~vk~GavVIDvGi  230 (285)
T PRK14191        194 LSFYTQN-----ADIVCVGVGKPDLI-KASMVKKGAVVVDIGI  230 (285)
T ss_pred             HHHHHHh-----CCEEEEecCCCCcC-CHHHcCCCcEEEEeec
Confidence            3333433     89999999986442 2456688989988886

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=96.23  E-value=0.046  Score=42.69  Aligned_cols=99  Identities=18%  Similarity=0.145  Sum_probs=62.0

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ....++++++||-.|  +|.|..+..+++.. .+|+.+..+++-.+.+++.   .+... ++.... +..+.+.  ..+.
T Consensus        72 ~~l~~~~~~~VLeiG--~GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~~~~--~~~~  144 (212)
T PRK00312         72 ELLELKPGDRVLEIG--TGSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHN-VSVRHG-DGWKGWP--AYAP  144 (212)
T ss_pred             HhcCCCCCCEEEEEC--CCccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCc-eEEEEC-CcccCCC--cCCC
Confidence            456788899999998  55566666666653 4899999888777666643   34432 222211 2211111  1136


Q ss_pred             ccEEEeCCCc-chHHHHHHccccCCEEEEE
Q 042426          151 IDIYFENVGG-KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       151 ~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  179 (270)
                      ||+|+-.... .......+.|+++|+++..
T Consensus       145 fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~  174 (212)
T PRK00312        145 FDRILVTAAAPEIPRALLEQLKEGGILVAP  174 (212)
T ss_pred             cCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence            9988765443 3556778899999998754

>PLN03075 nicotianamine synthase; Provisional

Probab=96.21  E-value=0.061  Score=44.00  Aligned_cols=97  Identities=9%  Similarity=0.039  Sum_probs=67.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhC----CCceeecCCchhHHHHHHhHcCCCccE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKFG----FDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~g----~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      +.++|+-+|. |+.++.++.+++.+  +.+++.++.+++..+.+++.+.    ...-+.+... +..+....  .++||+
T Consensus       123 ~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~~--l~~FDl  198 (296)
T PLN03075        123 VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTES--LKEYDV  198 (296)
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhcccc--cCCcCE
Confidence            6789999984 88999888888654  4589999999998888874442    2233444333 33321111  136999


Q ss_pred             EEeCC------Cc--chHHHHHHccccCCEEEEEc
Q 042426          154 YFENV------GG--KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       154 v~d~~------g~--~~~~~~~~~l~~~G~~v~~g  180 (270)
                      ||-.+      ..  ..++...+.|+|||.++.-.
T Consensus       199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             EEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            98875      12  27889999999999988654

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=96.19  E-value=0.012  Score=49.11  Aligned_cols=71  Identities=21%  Similarity=0.217  Sum_probs=48.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +++|+|++|.+|..+++.+...|.+|+++.+++++...+. ..+... ..|..+.+++.+.+.     ++|.|+++++
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~l~~~~~-----~~d~vi~~a~   73 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVEIVEGDLRDPASLRKAVA-----GCRALFHVAA   73 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCceEEEeeCCCHHHHHHHHh-----CCCEEEEece
Confidence            5899999999999999999888999999998766544333 333331 224444312333332     3799999875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=96.18  E-value=0.041  Score=43.94  Aligned_cols=81  Identities=25%  Similarity=0.290  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhC----CC---ceeecCC-chhHHHHHHhHc--
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK--VDLLKHKFG----FD---DAFNYKE-EPDLDAALNRCF--  147 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~--~~~~~~~~g----~~---~vi~~~~-~~~~~~~i~~~~--  147 (270)
                      .+.+++|+|+++++|.+++..+...|++|+++.+..+.  .+.+.+...    ..   ...|..+ ..+....+.+..  
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~   83 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE   83 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999888999998888876543  333331222    11   1135543 323332232222  


Q ss_pred             CCCccEEEeCCCc
Q 042426          148 PEGIDIYFENVGG  160 (270)
Q Consensus       148 ~~~~d~v~d~~g~  160 (270)
                      -|+.|++++++|.
T Consensus        84 ~g~id~lvnnAg~   96 (251)
T COG1028          84 FGRIDILVNNAGI   96 (251)
T ss_pred             cCCCCEEEECCCC
Confidence            2368999999984

>PRK07340 ornithine cyclodeaminase; Validated

Probab=96.16  E-value=0.13  Score=42.53  Aligned_cols=93  Identities=9%  Similarity=-0.002  Sum_probs=64.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVK-LVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~-~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      ...+++|+|+ |..|.+.++.+. ..+. +|++..+++++.+.+.+++.... +..... +..+.+.     ++|+|+.|
T Consensus       124 ~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~-~~~~~~-~~~~av~-----~aDiVita  195 (304)
T PRK07340        124 PPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALG-PTAEPL-DGEAIPE-----AVDLVVTA  195 (304)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcC-CeeEEC-CHHHHhh-----cCCEEEEc
Confidence            4568999996 999999888876 4676 79999999888777665664311 111111 4544553     39999999


Q ss_pred             CCcc--hHHHHHHccccCCEEEEEcccc
Q 042426          158 VGGK--MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       158 ~g~~--~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +.+.  .+.. +  ++|+-++..+|...
T Consensus       196 T~s~~Pl~~~-~--~~~g~hi~~iGs~~  220 (304)
T PRK07340        196 TTSRTPVYPE-A--ARAGRLVVAVGAFT  220 (304)
T ss_pred             cCCCCceeCc-c--CCCCCEEEecCCCC
Confidence            9863  4443 3  68888999998743

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=96.16  E-value=0.041  Score=38.27  Aligned_cols=96  Identities=18%  Similarity=0.194  Sum_probs=60.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      |.+|+-.|  .|.|..++.+++....+++++..++...+.+++.+   +.+.-++.... ++.+.......+.+|+|+-.
T Consensus         1 g~~vlD~~--~G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~D~Iv~n   77 (117)
T PF13659_consen    1 GDRVLDPG--CGSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVG-DARDLPEPLPDGKFDLIVTN   77 (117)
T ss_dssp             TEEEEEET--STTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEES-HHHHHHHTCTTT-EEEEEE-
T ss_pred             CCEEEEcC--cchHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEEC-chhhchhhccCceeEEEEEC
Confidence            46777776  55666666666665579999999999888777433   22211233333 55554433334489999864


Q ss_pred             CCc---------------chHHHHHHccccCCEEEEE
Q 042426          158 VGG---------------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       158 ~g~---------------~~~~~~~~~l~~~G~~v~~  179 (270)
                      ..-               ..+..+.+.|+++|+++.+
T Consensus        78 pP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~  114 (117)
T PF13659_consen   78 PPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI  114 (117)
T ss_dssp             -STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            321               1367899999999998875

...

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.16  E-value=0.11  Score=39.39  Aligned_cols=96  Identities=21%  Similarity=0.186  Sum_probs=54.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeecCC--chhHHHHHHhHc-----CC--Cc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--DDAFNYKE--EPDLDAALNRCF-----PE--GI  151 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~~vi~~~~--~~~~~~~i~~~~-----~~--~~  151 (270)
                      +|.|.|+ |.+|...+.++...|.+|...+.+++..+..++....  +.......  .......+....     ..  ++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~~a   79 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAVDA   79 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGCTE
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHhhh
Confidence            5889998 9999999999988899999999999887666533211  00111111  001112222111     11  69


Q ss_pred             cEEEeCCCcc------hHHHHHHccccCCEEEEE
Q 042426          152 DIYFENVGGK------MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       152 d~v~d~~g~~------~~~~~~~~l~~~G~~v~~  179 (270)
                      |+|+|++...      .+...-+.+.++-.+.+-
T Consensus        80 dlViEai~E~l~~K~~~~~~l~~~~~~~~ilasn  113 (180)
T PF02737_consen   80 DLVIEAIPEDLELKQELFAELDEICPPDTILASN  113 (180)
T ss_dssp             SEEEE-S-SSHHHHHHHHHHHHCCS-TTSEEEE-
T ss_pred             heehhhccccHHHHHHHHHHHHHHhCCCceEEec
Confidence            9999999863      344455555666666543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.15  E-value=0.07  Score=39.52  Aligned_cols=81  Identities=21%  Similarity=0.203  Sum_probs=56.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC------Cce----eecCCchhHHHHHHhHcCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF------DDA----FNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~------~~v----i~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      +|.|.|+ |..|.+++..+...|.+|..-.++++..+.++ +-+.      ...    +... . ++.+.+++     .|
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~-~~~~n~~~~~~~~l~~~i~~t-~-dl~~a~~~-----ad   71 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEIN-ETRQNPKYLPGIKLPENIKAT-T-DLEEALED-----AD   71 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHH-HHTSETTTSTTSBEETTEEEE-S-SHHHHHTT------S
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH-HhCCCCCCCCCcccCcccccc-c-CHHHHhCc-----cc
Confidence            5889998 99999999999999999999999998888887 3222      111    1111 1 56665543     89


Q ss_pred             EEEeCCCcchHHHHHHcccc
Q 042426          153 IYFENVGGKMLDAVLLNMRI  172 (270)
Q Consensus       153 ~v~d~~g~~~~~~~~~~l~~  172 (270)
                      +++=++....++..++.+++
T Consensus        72 ~IiiavPs~~~~~~~~~l~~   91 (157)
T PF01210_consen   72 IIIIAVPSQAHREVLEQLAP   91 (157)
T ss_dssp             EEEE-S-GGGHHHHHHHHTT
T ss_pred             EEEecccHHHHHHHHHHHhh
Confidence            99999988766666665555

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=96.15  E-value=0.24  Score=37.76  Aligned_cols=98  Identities=14%  Similarity=0.233  Sum_probs=63.7

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      ....+.++++||=.|  +|.|..++.+++.. +.+|+++..+++..+.+++   +.+... +..... +....    ..+
T Consensus        25 ~~l~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~-i~~~~~-d~~~~----~~~   96 (187)
T PRK08287         25 SKLELHRAKHLIDVG--AGTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGN-IDIIPG-EAPIE----LPG   96 (187)
T ss_pred             HhcCCCCCCEEEEEC--CcCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCC-eEEEec-Cchhh----cCc
Confidence            344567888999888  56678888888765 4699999999887777653   234332 112111 22111    123


Q ss_pred             CccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426          150 GIDIYFENVGG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       150 ~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                      .+|+|+.....    ..+..+.+.|+++|+++..
T Consensus        97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         97 KADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             CCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            69999864321    2667888999999998764

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.14  E-value=0.08  Score=44.39  Aligned_cols=90  Identities=26%  Similarity=0.163  Sum_probs=64.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC------ce----eecCCchhHHHHHHhHcCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD------DA----FNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~------~v----i~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      +|.|+|+ |.+|.+.+..+...|.+|++..+++++.+.+. +.+..      ..    +... . +..+.+.     ..|
T Consensus         6 ~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~-~~~~~~~~~~g~~~~~~~~~~-~-~~~e~~~-----~aD   76 (328)
T PRK14618          6 RVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALA-AERENREYLPGVALPAELYPT-A-DPEEALA-----GAD   76 (328)
T ss_pred             eEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HhCcccccCCCCcCCCCeEEe-C-CHHHHHc-----CCC
Confidence            6999997 99999999998888999999999888877776 33211      00    1111 1 3333332     389


Q ss_pred             EEEeCCCcchHHHHHHccccCCEEEEEcc
Q 042426          153 IYFENVGGKMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       153 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +|+-|+....+...++.++++-.++.+..
T Consensus        77 ~Vi~~v~~~~~~~v~~~l~~~~~vi~~~~  105 (328)
T PRK14618         77 FAVVAVPSKALRETLAGLPRALGYVSCAK  105 (328)
T ss_pred             EEEEECchHHHHHHHHhcCcCCEEEEEee
Confidence            99999998877888888888777776544

>PRK08317 hypothetical protein; Provisional

Probab=96.12  E-value=0.046  Score=43.27  Aligned_cols=102  Identities=23%  Similarity=0.284  Sum_probs=66.5

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh-CCCceeecCCchhHHHHHHhHcCCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKF-GFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~-g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      +...+.++++||-.|.  |.|..+..+++..+  .++++++.+++..+.+++.. .....+..... +... . ....+.
T Consensus        13 ~~~~~~~~~~vLdiG~--G~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~   87 (241)
T PRK08317         13 ELLAVQPGDRVLDVGC--GPGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG-DADG-L-PFPDGS   87 (241)
T ss_pred             HHcCCCCCCEEEEeCC--CCCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec-cccc-C-CCCCCC
Confidence            4567888999999985  45888889988773  59999999998888887331 11111212111 1111 0 011236


Q ss_pred             ccEEEeCCC-----c--chHHHHHHccccCCEEEEEc
Q 042426          151 IDIYFENVG-----G--KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       151 ~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g  180 (270)
                      ||+|+....     .  ..+....++|+++|.++...
T Consensus        88 ~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         88 FDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             ceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            888875432     2  37788999999999998764

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=96.11  E-value=0.04  Score=45.46  Aligned_cols=74  Identities=27%  Similarity=0.415  Sum_probs=53.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHhC-CC---ce--eecCCchhHHHHHHhHcCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV---DLLKHKFG-FD---DA--FNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~---~~~~~~~g-~~---~v--i~~~~~~~~~~~i~~~~~~~  150 (270)
                      .+..|.|+||+|=+|.+.+..+-..|++|.+++|++++.   +.++ ++. +.   .+  -|-.++..|.+.+.     |
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g   78 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-KLEGAKERLKLFKADLLDEGSFDKAID-----G   78 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-hcccCcccceEEeccccccchHHHHHh-----C
Confidence            567899999999999999999999999999999998864   3455 443 22   11  13333325555553     4


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|.||-++.
T Consensus        79 cdgVfH~As   87 (327)
T KOG1502|consen   79 CDGVFHTAS   87 (327)
T ss_pred             CCEEEEeCc
Confidence            899988765

>TIGR00477 tehB tellurite resistance protein TehB

Probab=96.08  E-value=0.033  Score=42.90  Aligned_cols=96  Identities=11%  Similarity=0.055  Sum_probs=59.8

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      ...++.+||-.|  +|.|..++.+++ .|.+|++++.++.-.+.+++.   .+..  +..... ++.. . . .++.+|+
T Consensus        27 ~~~~~~~vLDiG--cG~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~-~-~-~~~~fD~   97 (195)
T TIGR00477        27 KTVAPCKTLDLG--CGQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA-A-A-LNEDYDF   97 (195)
T ss_pred             ccCCCCcEEEeC--CCCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh-c-c-ccCCCCE
Confidence            344556899888  677888888887 488999999998877666522   2322  111111 1111 0 0 1235999


Q ss_pred             EEeCCC-----c----chHHHHHHccccCCEEEEEcc
Q 042426          154 YFENVG-----G----KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       154 v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      |+.+.-     .    ..+..+.+.|+|+|.++.+..
T Consensus        98 I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~~  134 (195)
T TIGR00477        98 IFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVAA  134 (195)
T ss_pred             EEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence            876422     1    266788889999999665544

Part of a tellurite-reducing operon tehA and tehB

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.08  E-value=0.041  Score=40.87  Aligned_cols=43  Identities=23%  Similarity=0.302  Sum_probs=39.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK  122 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~  122 (270)
                      .|..|+++|+.-|+|...++-+...|++|+++.|.++++..+.
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV   48 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV   48 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH
Confidence            4678999999899999999999999999999999999988777

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=96.07  E-value=0.061  Score=40.85  Aligned_cols=76  Identities=18%  Similarity=0.225  Sum_probs=43.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH-------HHHHHHHHHhCCCc---eeecCCchhHHHHHHhHcC--C
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSK-------EKVDLLKHKFGFDD---AFNYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~-------~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~  149 (270)
                      ++||+|+.|++|+..++.+...+. +++++.++.       +..+.++ +.|...   -.|..+..++.+.+.+...  +
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELE-SAGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHH-HTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHH-hCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            589999999999999988877766 999999882       1234444 445531   1244444234444443322  2


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      .++-||.+.|
T Consensus        81 ~i~gVih~ag   90 (181)
T PF08659_consen   81 PIDGVIHAAG   90 (181)
T ss_dssp             -EEEEEE---
T ss_pred             Ccceeeeeee
Confidence            5677777766

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=96.03  E-value=0.21  Score=41.77  Aligned_cols=88  Identities=17%  Similarity=0.160  Sum_probs=61.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVK-LVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~-~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      .|.++.|+|. |.+|...+++++ .+|.+|+...+.... +... .++..    +  . ++.+.+.+     .|+|.-+.
T Consensus       144 ~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~~~~-~~~~-~~~~~----~--~-~l~ell~~-----sDvv~lh~  208 (323)
T PRK15409        144 HHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARRHHK-EAEE-RFNAR----Y--C-DLDTLLQE-----SDFVCIIL  208 (323)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCCCch-hhHH-hcCcE----e--c-CHHHHHHh-----CCEEEEeC
Confidence            4679999997 999999999998 899999987765322 1112 34432    1  1 45555544     78988877


Q ss_pred             Cc-c-----hHHHHHHccccCCEEEEEccc
Q 042426          159 GG-K-----MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       159 g~-~-----~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      .. +     .-...++.|+++..++.++..
T Consensus       209 plt~~T~~li~~~~l~~mk~ga~lIN~aRG  238 (323)
T PRK15409        209 PLTDETHHLFGAEQFAKMKSSAIFINAGRG  238 (323)
T ss_pred             CCChHHhhccCHHHHhcCCCCeEEEECCCc
Confidence            63 2     235688899999999998773

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.00  E-value=0.16  Score=42.24  Aligned_cols=85  Identities=19%  Similarity=0.153  Sum_probs=61.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.++.|+|- |.+|..++++++.+|.+|++..++...    . ..+.    .+  . ++.+.+.+     .|+|.-++.
T Consensus       144 ~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~----~-~~~~----~~--~-~l~ell~~-----sDvv~lh~P  205 (311)
T PRK08410        144 KGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKN----K-NEEY----ER--V-SLEELLKT-----SDIISIHAP  205 (311)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccc----c-ccCc----ee--e-cHHHHhhc-----CCEEEEeCC
Confidence            4789999997 999999999999999999999865321    0 1111    11  1 45555544     788887765


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEccc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      . +     .-...+..|+++..+|.++..
T Consensus       206 lt~~T~~li~~~~~~~Mk~~a~lIN~aRG  234 (311)
T PRK08410        206 LNEKTKNLIAYKELKLLKDGAILINVGRG  234 (311)
T ss_pred             CCchhhcccCHHHHHhCCCCeEEEECCCc
Confidence            2 2     336788999999999998773

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=95.99  E-value=0.13  Score=43.14  Aligned_cols=90  Identities=22%  Similarity=0.233  Sum_probs=61.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHh----CCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVK-LVGC-YVVGSARSKEKVDLLKHKF----GFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~-~~g~-~v~~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      ...+++|+|+ |+.|.+.+..+. ..++ +|++..++.++.+.+.+++    |.. +....   +..+.+.     ..|+
T Consensus       128 ~~~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~---~~~~av~-----~aDi  197 (326)
T TIGR02992       128 DSSVVAIFGA-GMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAAT---DPRAAMS-----GADI  197 (326)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeC---CHHHHhc-----cCCE
Confidence            4568999997 999988877765 5776 7999999998877665454    332 22121   4444443     3899


Q ss_pred             EEeCCCcc--hHHHHHHccccCCEEEEEcc
Q 042426          154 YFENVGGK--MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       154 v~d~~g~~--~~~~~~~~l~~~G~~v~~g~  181 (270)
                      |+.|++..  .+..  +.++++-.+..+|.
T Consensus       198 VvtaT~s~~p~i~~--~~l~~g~~i~~vg~  225 (326)
T TIGR02992       198 IVTTTPSETPILHA--EWLEPGQHVTAMGS  225 (326)
T ss_pred             EEEecCCCCcEecH--HHcCCCcEEEeeCC
Confidence            99999863  3332  34788777777776

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.97  E-value=0.13  Score=41.39  Aligned_cols=96  Identities=15%  Similarity=0.147  Sum_probs=65.2

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      ...+.++++||=+|  +|.|..+..+++.. +.+|++++.++.-.+.+++.+.-...+.   . +....   ...+.+|+
T Consensus        26 ~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~---~-d~~~~---~~~~~fD~   96 (258)
T PRK01683         26 RVPLENPRYVVDLG--CGPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE---A-DIASW---QPPQALDL   96 (258)
T ss_pred             hCCCcCCCEEEEEc--ccCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE---C-chhcc---CCCCCccE
Confidence            34567789999998  66788888888776 5699999999988888874432111211   1 22111   11126999


Q ss_pred             EEeCCCc-------chHHHHHHccccCCEEEEE
Q 042426          154 YFENVGG-------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       154 v~d~~g~-------~~~~~~~~~l~~~G~~v~~  179 (270)
                      |+....-       ..+..+.+.|+++|.++..
T Consensus        97 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683         97 IFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             EEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            9865441       2678889999999998875

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=95.95  E-value=0.038  Score=46.02  Aligned_cols=37  Identities=24%  Similarity=0.355  Sum_probs=32.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK  117 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~  117 (270)
                      +.+|||+||+|-+|..++..+...|.+|++++++..+
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            5689999999999999999998899999998876543

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.95  E-value=0.18  Score=34.98  Aligned_cols=91  Identities=19%  Similarity=0.171  Sum_probs=60.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc--
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK--  161 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~--  161 (270)
                      |+|.|. |.+|..+++.++..+.+|+++..+++..+.++ +.|.. ++. .+. .-.+.+++..-..++.++-+++..  
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-~~~~~-~i~-gd~-~~~~~l~~a~i~~a~~vv~~~~~d~~   75 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR-EEGVE-VIY-GDA-TDPEVLERAGIEKADAVVILTDDDEE   75 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTSE-EEE-S-T-TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-hcccc-ccc-ccc-hhhhHHhhcCccccCEEEEccCCHHH
Confidence            578887 99999999999997779999999999999998 66754 332 222 122334443333688888888764  


Q ss_pred             --hHHHHHHccccCCEEEEE
Q 042426          162 --MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       162 --~~~~~~~~l~~~G~~v~~  179 (270)
                        .....++.+.+..+++..
T Consensus        76 n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   76 NLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHHCCCCeEEEE
Confidence              233444555566676654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN02650 dihydroflavonol-4-reductase

Probab=95.94  E-value=0.053  Score=45.83  Aligned_cols=41  Identities=27%  Similarity=0.269  Sum_probs=34.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL  121 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~  121 (270)
                      ..+|||+||+|-+|..++..+...|.+|++++++.++.+.+
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~   45 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKV   45 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHH
Confidence            45899999999999999999988999999998876555443

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.93  E-value=0.12  Score=38.58  Aligned_cols=86  Identities=21%  Similarity=0.201  Sum_probs=57.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc-c
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-K  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~  161 (270)
                      +|.++|. |.+|...++-+...|.+|++..+++++.+.+. +.|+. ..+     +..+.+.+     .|+||-|+.. .
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~-~~~-----s~~e~~~~-----~dvvi~~v~~~~   69 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAE-VAD-----SPAEAAEQ-----ADVVILCVPDDD   69 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEE-EES-----SHHHHHHH-----BSEEEE-SSSHH
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhh-hhh-----hhhhHhhc-----ccceEeecccch
Confidence            6889997 99999999998889999999999999998888 55642 221     34444444     6888888876 3


Q ss_pred             hHHHH------HHccccCCEEEEEcc
Q 042426          162 MLDAV------LLNMRICGHIAVCGM  181 (270)
Q Consensus       162 ~~~~~------~~~l~~~G~~v~~g~  181 (270)
                      .....      +..+.++..++.++.
T Consensus        70 ~v~~v~~~~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   70 AVEAVLFGENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             HHHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred             hhhhhhhhhHHhhccccceEEEecCC
Confidence            33333      334455556666544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.93  E-value=0.11  Score=40.82  Aligned_cols=100  Identities=13%  Similarity=0.102  Sum_probs=56.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH-------------------HHHHHHHHHh---CC-CceeecCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSK-------------------EKVDLLKHKF---GF-DDAFNYKEE  136 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~-------------------~~~~~~~~~~---g~-~~vi~~~~~  136 (270)
                      .++|+|.|. ||+|.+++..+..-|+ ++..++.++                   .+.+.+++..   .. .++--..+.
T Consensus        30 ~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f  108 (263)
T COG1179          30 QAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF  108 (263)
T ss_pred             hCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence            368999997 9999999999988898 776666332                   1222222111   11 111111111


Q ss_pred             hhHHHHHHhHcCCCccEEEeCCCcc--hHHHHHHccccCCEEEEEccc
Q 042426          137 PDLDAALNRCFPEGIDIYFENVGGK--MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       137 ~~~~~~i~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~  182 (270)
                       -..+.+.+...++||+|+||..+-  -......|.+.+=.+++.+..
T Consensus       109 -~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Ga  155 (263)
T COG1179         109 -ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGA  155 (263)
T ss_pred             -hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccc
Confidence             122344444555899999999873  333344444555566665543

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.92  E-value=0.15  Score=41.50  Aligned_cols=94  Identities=18%  Similarity=0.125  Sum_probs=66.3

Q ss_pred             ccCchhhhHHHHhhhhcCC-CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchh
Q 042426           60 ILGMPGLTAYGGLHELCSP-KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPD  138 (270)
Q Consensus        60 ~l~~~~~ta~~~l~~~~~~-~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  138 (270)
                      -.|+.....+..+.. .++ -.|.+++|.|.+.-+|.-++.++...|+.|++.-+.                    +. +
T Consensus       138 ~~PcTp~av~~ll~~-~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~--------------------T~-~  195 (285)
T PRK10792        138 LRPCTPRGIMTLLER-YGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF--------------------TK-N  195 (285)
T ss_pred             CCCCCHHHHHHHHHH-cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC--------------------CC-C
Confidence            346655555555533 333 358999999997889999999999999988777532                    11 3


Q ss_pred             HHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcc
Q 042426          139 LDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       139 ~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +.+.+++     .|+++.++|.+.+-. -+.++++..++.+|.
T Consensus       196 l~~~~~~-----ADIvi~avG~p~~v~-~~~vk~gavVIDvGi  232 (285)
T PRK10792        196 LRHHVRN-----ADLLVVAVGKPGFIP-GEWIKPGAIVIDVGI  232 (285)
T ss_pred             HHHHHhh-----CCEEEEcCCCccccc-HHHcCCCcEEEEccc
Confidence            3334443     899999999865422 378899999999885

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.91  E-value=0.18  Score=42.05  Aligned_cols=86  Identities=21%  Similarity=0.206  Sum_probs=59.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      |.++.|+|. |.+|..+++.++.+|.+|++.++ .......   ..+.   .-.  . ++.+.+.+     .|++.-.+.
T Consensus       142 gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~---~~~~---~~~--~-~Ld~lL~~-----sDiv~lh~P  206 (324)
T COG0111         142 GKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAG---VDGV---VGV--D-SLDELLAE-----ADILTLHLP  206 (324)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhc---cccc---eec--c-cHHHHHhh-----CCEEEEcCC
Confidence            679999997 99999999999999999999997 3322221   1121   101  1 45555554     788877665


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEcc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      - +     .-...+..|+++..++.++.
T Consensus       207 lT~eT~g~i~~~~~a~MK~gailIN~aR  234 (324)
T COG0111         207 LTPETRGLINAEELAKMKPGAILINAAR  234 (324)
T ss_pred             CCcchhcccCHHHHhhCCCCeEEEECCC
Confidence            2 1     23567788888888888766

>PRK14967 putative methyltransferase; Provisional

Probab=95.89  E-value=0.14  Score=40.27  Aligned_cols=95  Identities=18%  Similarity=0.117  Sum_probs=61.8

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      ..++++++||-.|.  |.|..++.+++. +. +|+++..++...+.+++   ..+....+  ... ++.+.+   ..+.|
T Consensus        32 ~~~~~~~~vLDlGc--G~G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~--~~~-d~~~~~---~~~~f  102 (223)
T PRK14967         32 EGLGPGRRVLDLCT--GSGALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDV--RRG-DWARAV---EFRPF  102 (223)
T ss_pred             cccCCCCeEEEecC--CHHHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEE--EEC-chhhhc---cCCCe
Confidence            45778899999984  448888888875 55 99999999887776652   23332111  112 333322   12369


Q ss_pred             cEEEeCCCc----------------------------chHHHHHHccccCCEEEEE
Q 042426          152 DIYFENVGG----------------------------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       152 d~v~d~~g~----------------------------~~~~~~~~~l~~~G~~v~~  179 (270)
                      |+|+.....                            ..+..+.+.|+++|+++.+
T Consensus       103 D~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~  158 (223)
T PRK14967        103 DVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV  158 (223)
T ss_pred             eEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            999875320                            1345678899999999875

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=95.88  E-value=0.7  Score=37.03  Aligned_cols=95  Identities=17%  Similarity=0.155  Sum_probs=60.6

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      ..++.+||-.|+  |.|..+..+++ .|.++++++.+++..+.+++.......+..    +... + ....+.||+|+..
T Consensus        40 ~~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~----d~~~-~-~~~~~~fD~V~s~  110 (251)
T PRK10258         40 QRKFTHVLDAGC--GPGWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAG----DIES-L-PLATATFDLAWSN  110 (251)
T ss_pred             ccCCCeEEEeeC--CCCHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEc----Cccc-C-cCCCCcEEEEEEC
Confidence            345678999984  34665555554 588999999999988888733322222211    1111 0 0112269999875


Q ss_pred             CCc-------chHHHHHHccccCCEEEEEcc
Q 042426          158 VGG-------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       158 ~g~-------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ..-       ..+..+.+.|+|+|.++....
T Consensus       111 ~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~  141 (251)
T PRK10258        111 LAVQWCGNLSTALRELYRVVRPGGVVAFTTL  141 (251)
T ss_pred             chhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence            431       267888899999999987644

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.86  E-value=0.85  Score=38.09  Aligned_cols=85  Identities=12%  Similarity=0.112  Sum_probs=54.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----------hCCC-----ceeecCCchhHHHHHHhH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK----------FGFD-----DAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~----------~g~~-----~vi~~~~~~~~~~~i~~~  146 (270)
                      .+|.|+|+ |.+|...++.+...|.+|++.+.+++..+.+++.          .+..     .-+....  ++.+.+   
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~--~l~~av---   81 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVA--TIEACV---   81 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecC--CHHHHh---
Confidence            47999997 9999999999888999999999988766554321          1110     0011111  222222   


Q ss_pred             cCCCccEEEeCCCcc------hHHHHHHccccCC
Q 042426          147 FPEGIDIYFENVGGK------MLDAVLLNMRICG  174 (270)
Q Consensus       147 ~~~~~d~v~d~~g~~------~~~~~~~~l~~~G  174 (270)
                        .++|+|++|+...      .+...-+.++++.
T Consensus        82 --~~aDlViEavpE~l~vK~~lf~~l~~~~~~~a  113 (321)
T PRK07066         82 --ADADFIQESAPEREALKLELHERISRAAKPDA  113 (321)
T ss_pred             --cCCCEEEECCcCCHHHHHHHHHHHHHhCCCCe
Confidence              2489999999853      3445555666665

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=95.83  E-value=0.027  Score=47.40  Aligned_cols=36  Identities=19%  Similarity=0.311  Sum_probs=32.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      ++.+|||+||+|.+|..+++.+...|.+|++++++.
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~   40 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRS   40 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeccc
Confidence            357899999999999999999999999999998754

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.82  E-value=0.19  Score=41.50  Aligned_cols=34  Identities=9%  Similarity=0.220  Sum_probs=30.2

Q ss_pred             CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeC
Q 042426           80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSAR  113 (270)
Q Consensus        80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~  113 (270)
                      .|.+++|+|++  +|+|.+.++.+...|++|++.++
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~   42 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW   42 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence            47899999995  89999999999999999999653

>PRK00536 speE spermidine synthase; Provisional

Probab=95.80  E-value=0.046  Score=43.97  Aligned_cols=96  Identities=15%  Similarity=0.015  Sum_probs=61.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CceeecCCchhHHHHHHhHcCCCccEEE-eC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF-DDAFNYKEEPDLDAALNRCFPEGIDIYF-EN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~~~~d~v~-d~  157 (270)
                      +..+|||+|  ||=|.++-.++|+-. +|..+.-+++-.+..++-+.. ...++.... .+...+.+...+.||+|+ |+
T Consensus        72 ~pk~VLIiG--GGDGg~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv-~l~~~~~~~~~~~fDVIIvDs  147 (262)
T PRK00536         72 ELKEVLIVD--GFDLELAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHEVKNNKNF-THAKQLLDLDIKKYDLIICLQ  147 (262)
T ss_pred             CCCeEEEEc--CCchHHHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHHhhcCCCE-EEeehhhhccCCcCCEEEEcC
Confidence            347899999  566777788888864 999999888888888832332 111221111 111123333334698875 54


Q ss_pred             CCc-chHHHHHHccccCCEEEEE
Q 042426          158 VGG-KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       158 ~g~-~~~~~~~~~l~~~G~~v~~  179 (270)
                      .-. ...+.+.++|+++|.++.=
T Consensus       148 ~~~~~fy~~~~~~L~~~Gi~v~Q  170 (262)
T PRK00536        148 EPDIHKIDGLKRMLKEDGVFISV  170 (262)
T ss_pred             CCChHHHHHHHHhcCCCcEEEEC
Confidence            443 4778899999999998863

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=95.79  E-value=0.057  Score=45.64  Aligned_cols=48  Identities=17%  Similarity=0.160  Sum_probs=38.7

Q ss_pred             hHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           67 TAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        67 ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      |||.-++....++ ..+|+|+||+|=+|..++..+...|.+|+++++..
T Consensus         2 ~~~~~~~~~~~~~-~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~   49 (348)
T PRK15181          2 TAYEELRTKLVLA-PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFS   49 (348)
T ss_pred             chhhhhhhccccc-CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            5676665444443 47899999999999999999998899999998754

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=95.78  E-value=0.2  Score=36.93  Aligned_cols=87  Identities=16%  Similarity=0.249  Sum_probs=59.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      .+.+|.|+|- |+-|.+.++-++..|.+|++..+... ..+.++ +-|.. +.      ++.+.+.+     .|+|+-.+
T Consensus         3 ~~k~IAViGy-GsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~-~~Gf~-v~------~~~eAv~~-----aDvV~~L~   68 (165)
T PF07991_consen    3 KGKTIAVIGY-GSQGHAHALNLRDSGVNVIVGLREGSASWEKAK-ADGFE-VM------SVAEAVKK-----ADVVMLLL   68 (165)
T ss_dssp             CTSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHH-HTT-E-CC------EHHHHHHC------SEEEE-S
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHH-HCCCe-ec------cHHHHHhh-----CCEEEEeC
Confidence            4678999998 99999999999999999999998766 677777 88874 32      45556655     89999888


Q ss_pred             Ccc----hH-HHHHHccccCCEEEEEc
Q 042426          159 GGK----ML-DAVLLNMRICGHIAVCG  180 (270)
Q Consensus       159 g~~----~~-~~~~~~l~~~G~~v~~g  180 (270)
                      ...    .+ +.....|+++-.++...
T Consensus        69 PD~~q~~vy~~~I~p~l~~G~~L~fah   95 (165)
T PF07991_consen   69 PDEVQPEVYEEEIAPNLKPGATLVFAH   95 (165)
T ss_dssp             -HHHHHHHHHHHHHHHS-TT-EEEESS
T ss_pred             ChHHHHHHHHHHHHhhCCCCCEEEeCC
Confidence            764    33 45556888888777643

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A

Probab=95.78  E-value=0.051  Score=39.92  Aligned_cols=98  Identities=21%  Similarity=0.369  Sum_probs=65.2

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      +++.+||=.|  +|.|.....+++.+  +.++++++.+++-.+.+++   +.+.+++ ..... ++.+ +.+...+.||+
T Consensus         2 ~~~~~iLDlG--cG~G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~~~~~ni-~~~~~-d~~~-l~~~~~~~~D~   76 (152)
T PF13847_consen    2 KSNKKILDLG--CGTGRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKELGLDNI-EFIQG-DIED-LPQELEEKFDI   76 (152)
T ss_dssp             TTTSEEEEET---TTSHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHHTTSTTE-EEEES-BTTC-GCGCSSTTEEE
T ss_pred             CCCCEEEEec--CcCcHHHHHHHHhcCCCCEEEEEECcHHHHHHhhccccccccccc-ceEEe-ehhc-cccccCCCeeE
Confidence            4567888887  77888888888543  6799999999998888874   3555522 11111 2222 22111146999


Q ss_pred             EEeCCC-----c--chHHHHHHccccCCEEEEEcc
Q 042426          154 YFENVG-----G--KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       154 v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      |+....     .  ..++.+.+.++++|.++....
T Consensus        77 I~~~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~~  111 (152)
T PF13847_consen   77 IISNGVLHHFPDPEKVLKNIIRLLKPGGILIISDP  111 (152)
T ss_dssp             EEEESTGGGTSHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEcCchhhccCHHHHHHHHHHHcCCCcEEEEEEC
Confidence            998643     1  267889999999999887644

...

>PLN02214 cinnamoyl-CoA reductase

Probab=95.76  E-value=0.082  Score=44.60  Aligned_cols=75  Identities=23%  Similarity=0.338  Sum_probs=49.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH--HHHHHh-CC-C--ce--eecCCchhHHHHHHhHcCCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD--LLKHKF-GF-D--DA--FNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~--~~~~~~-g~-~--~v--i~~~~~~~~~~~i~~~~~~~~  151 (270)
                      ++.+|+|+||+|-+|..++..+...|.+|++++++.++..  .+. .+ +. .  ..  .|..+..++.+.+.     ++
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~   82 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLR-ELEGGKERLILCKADLQDYEALKAAID-----GC   82 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHH-HhhCCCCcEEEEecCcCChHHHHHHHh-----cC
Confidence            4678999999999999999999888999999998765422  122 22 11 1  11  23333312333332     48


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |+||.+++.
T Consensus        83 d~Vih~A~~   91 (342)
T PLN02214         83 DGVFHTASP   91 (342)
T ss_pred             CEEEEecCC
Confidence            999999873

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=95.76  E-value=0.068  Score=43.24  Aligned_cols=101  Identities=17%  Similarity=0.191  Sum_probs=65.6

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhC------CCceeecCCchhHHHHHHhH
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKFG------FDDAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~g------~~~vi~~~~~~~~~~~i~~~  146 (270)
                      ...++++++||-.|  +|.|..+..+++..+  .+|++++.+++-.+.++++..      ... +..... +..+ + ..
T Consensus        68 ~~~~~~~~~VLDlG--cGtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~-i~~~~~-d~~~-l-p~  141 (261)
T PLN02233         68 WSGAKMGDRVLDLC--CGSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKN-IEWIEG-DATD-L-PF  141 (261)
T ss_pred             HhCCCCCCEEEEEC--CcCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCC-eEEEEc-cccc-C-CC
Confidence            34677899999998  566777778887765  599999999998887764332      111 111111 1110 0 01


Q ss_pred             cCCCccEEEeCCC-----c--chHHHHHHccccCCEEEEEcc
Q 042426          147 FPEGIDIYFENVG-----G--KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       147 ~~~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .++.||.|+-..+     .  ..+.++.+.|+|+|+++.+..
T Consensus       142 ~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~  183 (261)
T PLN02233        142 DDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDF  183 (261)
T ss_pred             CCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEEC
Confidence            1125899876443     1  268899999999999988755

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=95.76  E-value=0.018  Score=38.18  Aligned_cols=82  Identities=18%  Similarity=0.237  Sum_probs=53.1

Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeecCCchhHHHHHHhHcCCCccEEEeCCCc-------c
Q 042426           91 GAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD--AFNYKEEPDLDAALNRCFPEGIDIYFENVGG-------K  161 (270)
Q Consensus        91 g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-------~  161 (270)
                      +|.|..+..+++.-+.++++++.+++..+.+++......  ....+.. ++     ...++.||.|+....-       .
T Consensus         5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~~~~~~~~~~~~~   78 (95)
T PF08241_consen    5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAE-DL-----PFPDNSFDVVFSNSVLHHLEDPEA   78 (95)
T ss_dssp             -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTT-SS-----SS-TT-EEEEEEESHGGGSSHHHH
T ss_pred             CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHH-hC-----ccccccccccccccceeeccCHHH
Confidence            568888888888867799999999999999884443322  1111111 11     1112258999875542       2


Q ss_pred             hHHHHHHccccCCEEEE
Q 042426          162 MLDAVLLNMRICGHIAV  178 (270)
Q Consensus       162 ~~~~~~~~l~~~G~~v~  178 (270)
                      .++++.+.|+|+|+++.
T Consensus        79 ~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   79 ALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             HHHHHHHHEEEEEEEEE
T ss_pred             HHHHHHHHcCcCeEEeC
Confidence            67899999999999863

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.75  E-value=0.13  Score=36.36  Aligned_cols=91  Identities=21%  Similarity=0.203  Sum_probs=51.1

Q ss_pred             EEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHH----HHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEE
Q 042426           83 YVYVSAASGAVGQLVGQFVKL-VGCYVVGSARSKE----KVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~-~g~~v~~~~~~~~----~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      +|.|+|++|-+|.++++.+.. -+.++.....+..    ..+.-. -.|..  .+.-+  . ++.+.+.+     +|+++
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~-~~~~~~~~~~v~--~-~l~~~~~~-----~DVvI   72 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGE-LAGIGPLGVPVT--D-DLEELLEE-----ADVVI   72 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHH-HCTSST-SSBEB--S--HHHHTTH------SEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhh-hhCcCCcccccc--h-hHHHhccc-----CCEEE
Confidence            689999999999999999987 6778766664432    001110 11211  11111  1 44444433     89999


Q ss_pred             eCCCcchHHHHHHccccCCEEEEEccc
Q 042426          156 ENVGGKMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       156 d~~g~~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      |++..+.....++.+...|.-+.+|.+
T Consensus        73 DfT~p~~~~~~~~~~~~~g~~~ViGTT   99 (124)
T PF01113_consen   73 DFTNPDAVYDNLEYALKHGVPLVIGTT   99 (124)
T ss_dssp             EES-HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred             EcCChHHhHHHHHHHHhCCCCEEEECC
Confidence            999666665566655555655555543

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK14968 putative methyltransferase; Provisional

Probab=95.75  E-value=0.069  Score=40.61  Aligned_cols=44  Identities=27%  Similarity=0.198  Sum_probs=34.6

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK  124 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~  124 (270)
                      ..++.++|..|  +|.|..+..+++. +.+++++..+++-.+.+++.
T Consensus        21 ~~~~~~vLd~G--~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~   64 (188)
T PRK14968         21 DKKGDRVLEVG--TGSGIVAIVAAKN-GKKVVGVDINPYAVECAKCN   64 (188)
T ss_pred             ccCCCEEEEEc--cccCHHHHHHHhh-cceEEEEECCHHHHHHHHHH
Confidence            36778899998  6667777788777 88999999998877776533

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=95.74  E-value=0.11  Score=39.42  Aligned_cols=92  Identities=13%  Similarity=0.156  Sum_probs=59.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      ++++|-.|  +|.|..++.+++.. +.+|++++.+++..+.+++   +.+.++ +..... +..+ +.  ..+.||+|+-
T Consensus        43 ~~~vLDiG--cGtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~-i~~i~~-d~~~-~~--~~~~fD~I~s  115 (181)
T TIGR00138        43 GKKVIDIG--SGAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNN-VEIVNG-RAED-FQ--HEEQFDVITS  115 (181)
T ss_pred             CCeEEEec--CCCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCC-eEEEec-chhh-cc--ccCCccEEEe
Confidence            78899988  56667777777655 4599999999876655542   345443 222222 3322 11  1236999886


Q ss_pred             CCCc---chHHHHHHccccCCEEEEE
Q 042426          157 NVGG---KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       157 ~~g~---~~~~~~~~~l~~~G~~v~~  179 (270)
                      ..-.   ..++.+.+.|+++|+++..
T Consensus       116 ~~~~~~~~~~~~~~~~LkpgG~lvi~  141 (181)
T TIGR00138       116 RALASLNVLLELTLNLLKVGGYFLAY  141 (181)
T ss_pred             hhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence            5422   2567778899999999875

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.74  E-value=0.033  Score=39.56  Aligned_cols=80  Identities=21%  Similarity=0.247  Sum_probs=50.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      -+|-|+|+ |.+|..+...++..|..|..+. ++.++.+.+.+.++...+.+..+      .+     ...|++|=++..
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------~~-----~~aDlv~iavpD   78 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE------IL-----RDADLVFIAVPD   78 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG------GG-----CC-SEEEE-S-C
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc------cc-----ccCCEEEEEech
Confidence            47999998 9999999999999999988875 45556676664455433332211      11     138999999998


Q ss_pred             chHHHHHHccccC
Q 042426          161 KMLDAVLLNMRIC  173 (270)
Q Consensus       161 ~~~~~~~~~l~~~  173 (270)
                      ..+......|...
T Consensus        79 daI~~va~~La~~   91 (127)
T PF10727_consen   79 DAIAEVAEQLAQY   91 (127)
T ss_dssp             CHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHh
Confidence            8777777766543

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.71  E-value=0.06  Score=39.88  Aligned_cols=81  Identities=21%  Similarity=0.252  Sum_probs=56.8

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHhCCCceeecCCc---hhHHHHHHhHcC--CCcc
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-VDLLKHKFGFDDAFNYKEE---PDLDAALNRCFP--EGID  152 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-~~~~~~~~g~~~vi~~~~~---~~~~~~i~~~~~--~~~d  152 (270)
                      .+|-.-+|+|+.++.|.+.+..+...|+.|+..+-...+ .+.++ ++|-.-++...+.   .+....+...-.  |..|
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vak-elg~~~vf~padvtsekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAK-ELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHH-HhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence            345678999999999999999999999999888865554 45555 8887645443322   144444433322  3689


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      ..++|.|.
T Consensus        86 ~~vncagi   93 (260)
T KOG1199|consen   86 ALVNCAGI   93 (260)
T ss_pred             eeeeccce
Confidence            99999994

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=95.71  E-value=0.031  Score=44.34  Aligned_cols=101  Identities=20%  Similarity=0.292  Sum_probs=61.9

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---CCCce--eecCCchhHHHHHHhH
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKF---GFDDA--FNYKEEPDLDAALNRC  146 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~v--i~~~~~~~~~~~i~~~  146 (270)
                      +....++|++||=.+  +|+|..+..+++..+  .+|++++-+++=++.++++.   +...+  +.-+.. ++.  +   
T Consensus        41 ~~~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~-~lp--~---  112 (233)
T PF01209_consen   41 KLLGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAE-DLP--F---  112 (233)
T ss_dssp             HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTT-B----S---
T ss_pred             hccCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHH-Hhc--C---
Confidence            335678899999887  788888889998875  59999999998887777443   22211  111111 111  1   


Q ss_pred             cCCCccEEEeCCCc-------chHHHHHHccccCCEEEEEccc
Q 042426          147 FPEGIDIYFENVGG-------KMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       147 ~~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      .++-||.|.-+.|-       ..+.+..+.|+|||+++.+...
T Consensus       113 ~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~  155 (233)
T PF01209_consen  113 PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFS  155 (233)
T ss_dssp             -TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeecc
Confidence            11249999987763       2678999999999999987663

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=95.70  E-value=0.07  Score=41.82  Aligned_cols=90  Identities=14%  Similarity=0.133  Sum_probs=55.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      ++.+|||.|| |.++.-=+..+...|++|++++..-. ....+. +.|.-..+ .+   +|.+.-  .  .++++||-|+
T Consensus        24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~-~~~~i~~~-~r---~~~~~d--l--~g~~LViaAT   93 (223)
T PRK05562         24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK-KYGNLKLI-KG---NYDKEF--I--KDKHLIVIAT   93 (223)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH-hCCCEEEE-eC---CCChHH--h--CCCcEEEECC
Confidence            3568999998 99998888888888999999885431 222222 22221111 12   222111  1  2589999999


Q ss_pred             CcchHHHHHHccc-cCCEEEEE
Q 042426          159 GGKMLDAVLLNMR-ICGHIAVC  179 (270)
Q Consensus       159 g~~~~~~~~~~l~-~~G~~v~~  179 (270)
                      +.+.++..+...+ ..+.++..
T Consensus        94 dD~~vN~~I~~~a~~~~~lvn~  115 (223)
T PRK05562         94 DDEKLNNKIRKHCDRLYKLYID  115 (223)
T ss_pred             CCHHHHHHHHHHHHHcCCeEEE
Confidence            9877766665554 44666654

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.68  E-value=0.12  Score=37.89  Aligned_cols=96  Identities=17%  Similarity=0.208  Sum_probs=63.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCC-----chhHHHHHHhHcCC-CccEEE
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKE-----EPDLDAALNRCFPE-GIDIYF  155 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~-----~~~~~~~i~~~~~~-~~d~v~  155 (270)
                      .+|+|+|+-|..|.+.++..+..++-|.-++-++.+.      -....+++..+     ++...+++.+...+ ++|.||
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~   77 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ------ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF   77 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc------ccceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence            4799999999999999999999999887777543221      11222333322     11333444455566 899999


Q ss_pred             eCCCcc---------h------------------HHHHHHccccCCEEEEEcccc
Q 042426          156 ENVGGK---------M------------------LDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       156 d~~g~~---------~------------------~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      ...|+=         .                  ...+-..|+++|-+-+.|...
T Consensus        78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAka  132 (236)
T KOG4022|consen   78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKA  132 (236)
T ss_pred             EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccccc
Confidence            877731         0                  133456899999998887644

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.67  E-value=0.18  Score=41.76  Aligned_cols=86  Identities=20%  Similarity=0.237  Sum_probs=60.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|- |.+|...++.++..|.+|++..+.....+.+. ..|.. +.      ++.+.+.+     .|+|+-++.
T Consensus        15 kgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~-~~G~~-v~------sl~Eaak~-----ADVV~llLP   80 (335)
T PRK13403         15 QGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAK-ADGFE-VM------SVSEAVRT-----AQVVQMLLP   80 (335)
T ss_pred             CcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHH-HcCCE-EC------CHHHHHhc-----CCEEEEeCC
Confidence            4688999997 99999999999999999998876654555555 55652 21      34444443     789988886


Q ss_pred             cc----hH-HHHHHccccCCEEEEE
Q 042426          160 GK----ML-DAVLLNMRICGHIAVC  179 (270)
Q Consensus       160 ~~----~~-~~~~~~l~~~G~~v~~  179 (270)
                      .+    .+ ...+..|+++..++..
T Consensus        81 d~~t~~V~~~eil~~MK~GaiL~f~  105 (335)
T PRK13403         81 DEQQAHVYKAEVEENLREGQMLLFS  105 (335)
T ss_pred             ChHHHHHHHHHHHhcCCCCCEEEEC
Confidence            53    22 3567788888766543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	270
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		1e-114
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		1e-110
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		6e-51
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		8e-44
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		2e-42
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		3e-42
2zb4_A	357	Crystal Structure Of Human 15-Ketoprostaglandin Del		6e-33
2w4q_A	357	Crystal Structure Of Human Zinc-Binding Alcohol Deh		6e-33
2zb3_A	353	Crystal Structure Of Mouse 15-Ketoprostaglandin Del		2e-30
1vj1_A	363	Crystal Structure Of Putative Nadph-Dependent Oxido		1e-28
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		1e-20
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		1e-20
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-20
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		2e-07
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		3e-07
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		4e-06
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		5e-06
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		1e-05
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		2e-04

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score =  405 bits (1042), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 192/269 (71%), Positives = 228/269 (84%)
Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGIL 61
            P++GYGV+KVL+S  P ++K DLVWG+T WEE+S+I   Q L KI D  VPL YYTGIL
Sbjct: 75  SPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIHDKDVPLSYYTGIL 134
Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
           GMPG+TAY G HE+CSPKKGE V+VSAASGAVGQLVGQF K++GCYVVGSA SKEKVDLL
Sbjct: 135 GMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLL 194
Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
           K KFGFD+AFNYKEE DL AAL R FP+GIDIYFENVGGKMLDAVL+NM++ G IAVCGM
Sbjct: 195 KSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGM 254
Query: 182 ISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIA 241
           ISQYN+E+ EGVHNL  ++ KRI MEGFL  D+YH YPK+LE+V+  IK GK+VYVED+A
Sbjct: 255 ISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVA 314
Query: 242 EGLEKAPSALVGIFTGQNVGKQLVAVARE 270
            GLE AP+ALVG+F+G+N+GKQ+V V+RE
Sbjct: 315 HGLESAPTALVGLFSGRNIGKQVVMVSRE 343

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score =  392 bits (1008), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 187/270 (69%), Positives = 222/270 (82%), Gaps = 1/270 (0%)
Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQS-PQLLIKILDTSVPLPYYTGI 60
           QP+ GYGVS++++S HP+YKK DL+WG+ +WEE+S+I        KI  T VPL YYTG+
Sbjct: 76  QPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGL 135
Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           LGMPG+TAY G +E+CSPK+GE VYVSAASGAVGQLVGQ  K++GCYVVGSA SKEKVDL
Sbjct: 136 LGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL 195
Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           LK KFGFDDAFNYKEE DL AAL RCFP GIDIYFENVGGKMLDAVL+NM + G IAVCG
Sbjct: 196 LKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCG 255
Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
           MISQYN+E  EGVHNL  ++ KR  ++GF+  DFY +Y KFLE V+  I+EGK+ YVED+
Sbjct: 256 MISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDV 315
Query: 241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           A+GLEKAP ALVG+F G+NVGKQ+V VARE
Sbjct: 316 ADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score =  197 bits (501), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 111/265 (41%), Positives = 154/265 (58%), Gaps = 3/265 (1%)
Query: 4   LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGM 63
           +   GV KVL S HP ++  D V G    +++  I  P+   K+  +  PLP Y   LGM
Sbjct: 74  MRALGVGKVLVSKHPGFQAGDYVNGALGVQDY-FIGEPKGFYKVDPSRAPLPRYLSALGM 132
Query: 64  PGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH 123
            G+TAY  L ++  PK GE V +S A+GAVG + GQ  +L GC VVG A   EK   L  
Sbjct: 133 TGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE 192
Query: 124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
           + GFD A +YK E DL A L R  P+GID++F+NVGG++LD VL  +     I +CG IS
Sbjct: 193 ELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAIS 251
Query: 184 QY-NIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAE 242
           QY N E   G  N + ++  R  MEG +  D+  ++P+ L+ +   + EGKL   EDI E
Sbjct: 252 QYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVE 311
Query: 243 GLEKAPSALVGIFTGQNVGKQLVAV 267
           GLE  P  L+ +F+G+N GK ++ V
Sbjct: 312 GLETFPETLLKLFSGENFGKLVLKV 336

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score =  173 bits (439), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/272 (40%), Positives = 155/272 (56%), Gaps = 15/272 (5%)
Query: 4   LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDT---SVPLPYYTGI 60
           + G  V++V++S +  +    +V   + W     I   + L K+L      +PL    G 
Sbjct: 67  MMGQQVARVVESKNSAFPAGSIVLAQSGWTT-HFISDGKGLEKLLTEWPDKLPLSLALGT 125
Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           +GMPGLTAY GL E+C  K GE V VSAA+GAVG +VGQ  KL GC VVG+A S EK+  
Sbjct: 126 IGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY 185
Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           LK   GFD AFNYK    L+ AL +  P+G D YF+NVGG+ L+ VL  M+  G IA+CG
Sbjct: 186 LKQ-IGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICG 244
Query: 181 MISQYNI--EKPEGVHNLMQVVGKRICMEGFLA----GDFYHQYPKFLELVMLAIKEGKL 234
            IS YN   + P G  +   ++ K++ +EGF+     GD      K L  +M  + EGK+
Sbjct: 245 AISVYNRMDQLPPG-PSPESIIYKQLRIEGFIVYRWQGDVRE---KALRDLMKWVLEGKI 300
Query: 235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266
            Y E + +G E  P+A + +  G N+GK +V 
Sbjct: 301 QYHEHVTKGFENMPAAFIEMLNGANLGKAVVT 332

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/269 (40%), Positives = 148/269 (55%), Gaps = 11/269 (4%)
Query: 4   LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQL--LIKILDTSVPLPYYTGIL 61
           + G  V+KV++S +    K  +V     W   S+     L  L+     ++PL    G +
Sbjct: 62  MMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTV 121
Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
           GMPGLTAY GL E+C  K GE V V+AA+GAVG +VGQ  KL GC VVG+  S EKV  L
Sbjct: 122 GMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYL 181
Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
             K GFD  FNYK    L+  L +  P+G D YF+NVGG+  + V+  M+  G IA+CG 
Sbjct: 182 -QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGA 240
Query: 182 ISQYNIEKPEGVHNLMQ-VVGKRICMEGFLA----GDFYHQYPKFLELVMLAIKEGKLVY 236
           IS YN   P       + V+ + + ME F+     GD      K L+ ++  + EGK+ Y
Sbjct: 241 ISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQ---KALKDLLKWVLEGKIQY 297
Query: 237 VEDIAEGLEKAPSALVGIFTGQNVGKQLV 265
            E I EG E  P+A +G+  G N+GK +V
Sbjct: 298 KEYIIEGFENMPAAFMGMLKGDNLGKTIV 326

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score =  168 bits (426), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/269 (40%), Positives = 148/269 (55%), Gaps = 11/269 (4%)
Query: 4   LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQL--LIKILDTSVPLPYYTGIL 61
           + G  V+KV++S +    K  +V     W   S+     L  L+     ++PL    G +
Sbjct: 83  MMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTV 142
Query: 62  GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
           GMPGLTAY GL E+C  K GE V V+AA+GAVG +VGQ  KL GC VVG+  S EKV  L
Sbjct: 143 GMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYL 202
Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
             K GFD  FNYK    L+  L +  P+G D YF+NVGG+  + V+  M+  G IA+CG 
Sbjct: 203 -QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGA 261
Query: 182 ISQYNIEKPEGVHNLMQ-VVGKRICMEGFLA----GDFYHQYPKFLELVMLAIKEGKLVY 236
           IS YN   P       + V+ + + ME F+     GD      K L+ ++  + EGK+ Y
Sbjct: 262 ISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQ---KALKDLLKWVLEGKIQY 318
Query: 237 VEDIAEGLEKAPSALVGIFTGQNVGKQLV 265
            E I EG E  P+A +G+  G N+GK +V
Sbjct: 319 KEYIIEGFENMPAAFMGMLKGDNLGKTIV 347

>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357

Iteration: 1
 Score =  137 bits (345), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 143/279 (51%), Gaps = 12/279 (4%)
Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVP--LPYYTG 59
           Q + G G+  + +S H N  K D V       +  +I     L K+    V   L Y+ G
Sbjct: 78  QVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLG 137
Query: 60  ILGMPGLTAYGGLHELCSPKKG--EYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKE 116
            +GMPGLT+  G+ E      G  + + VS A+GA G + GQ    +GC  VVG   + E
Sbjct: 138 AIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 197
Query: 117 KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHI 176
           K  LL  + GFD A NYK++ ++   L    P G+D+YF+NVGG + D V+  M    HI
Sbjct: 198 KCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 256
Query: 177 AVCGMISQYN--IEKPEGVHNLMQVVGK--RICMEGFLAGDFYHQY-PKFLELVMLAIKE 231
            +CG ISQYN  +  P  +   ++ + K   I  E FL  ++  ++ P  L+L     KE
Sbjct: 257 ILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQW-FKE 315
Query: 232 GKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           GKL   E +  GLE   +A   + TG N+GKQ+V ++ E
Sbjct: 316 GKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354

>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357

Iteration: 1
 Score =  137 bits (345), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 143/279 (51%), Gaps = 12/279 (4%)
Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVP--LPYYTG 59
           Q + G G+  + +S H N  K D V       +  +I     L K+    V   L Y+ G
Sbjct: 73  QVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLG 132
Query: 60  ILGMPGLTAYGGLHELCSPKKG--EYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKE 116
            +GMPGLT+  G+ E      G  + + VS A+GA G + GQ    +GC  VVG   + E
Sbjct: 133 AIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 192
Query: 117 KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHI 176
           K  LL  + GFD A NYK++ ++   L    P G+D+YF+NVGG + D V+  M    HI
Sbjct: 193 KCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 251
Query: 177 AVCGMISQYN--IEKPEGVHNLMQVVGK--RICMEGFLAGDFYHQY-PKFLELVMLAIKE 231
            +CG ISQYN  +  P  +   ++ + K   I  E FL  ++  ++ P  L+L     KE
Sbjct: 252 ILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQW-FKE 310
Query: 232 GKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           GKL   E +  GLE   +A   + TG N+GKQ+V ++ E
Sbjct: 311 GKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 349

>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353

Iteration: 1
 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/285 (34%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGL-TSWEEFSLIQ-------SPQLLIKILDTSVP 53
           Q   G G+  V +S H    K D V      W+  +++         PQL+         
Sbjct: 74  QVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLV------DGH 127
Query: 54  LPYYTGILGMPGLTAYGGLHEL--CSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVG 110
           L Y+ G +GMPGLT+  G+ E    S    + + VS A+GA G L GQ   L+GC  VVG
Sbjct: 128 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVG 187
Query: 111 SARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNM 170
              ++EK   L  + GFD A NYK   ++   L    P G+D+YF+NVGG + +AV+  M
Sbjct: 188 ICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNAVISQM 246
Query: 171 RICGHIAVCGMISQYNIEKPEGVHNLMQVVGKR----ICMEGFLAGDFYHQY-PKFLELV 225
               HI +CG ISQY+ + P        V   R    I  E F   ++  ++ P  L+L 
Sbjct: 247 NENSHIILCGQISQYSNDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLS 306
Query: 226 MLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
               KEGKL   E +A+GLE    A   + TG NVGKQ+V ++ +
Sbjct: 307 QW-FKEGKLKVKETMAKGLENMGVAFQSMMTGGNVGKQIVCISED 350

>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363

Iteration: 1
 Score =  123 bits (308), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGL-TSWEEFSLIQ-------SPQLLIKILDTSVP 53
           Q   G G+  V +S H    K D V      W+  +++         PQL+         
Sbjct: 84  QVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLV------DGH 137
Query: 54  LPYYTGILGMPGLTAYGGLHEL--CSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVG 110
           L Y+ G +G PGLT+  G+ E    S    +   VS A+GA G L GQ   L+GC  VVG
Sbjct: 138 LSYFLGAIGXPGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVG 197
Query: 111 SARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNM 170
              ++EK   L  + GFD A NYK   ++   L    P G+D+YF+NVGG + + V+   
Sbjct: 198 ICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNTVISQX 256
Query: 171 RICGHIAVCGMISQYNIEKPEGVHNLMQVVGKR----ICMEGFLAGDFYHQY-PKFLELV 225
               HI +CG ISQYN + P        V   R    I  E F   ++  ++ P  L+L 
Sbjct: 257 NENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLS 316
Query: 226 MLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
               KEGKL   E +A+GLE    A     TG NVGKQ+V ++ +
Sbjct: 317 QW-FKEGKLKVKETVAKGLENXGVAFQSXXTGGNVGKQIVCISED 360

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 27/251 (10%)
Query: 31  SWEEFSLIQSPQLLIKILDTSVPL--PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSA 88
           S+ E++++ +       + T VP   P Y  +L + G TAY  L EL    +G+ V V+A
Sbjct: 127 SFAEYTVVPAS------IATPVPSVKPEYLTLL-VSGTTAYISLKELGGLSEGKKVLVTA 179
Query: 89  ASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFP 148
           A+G  GQ   Q  K   C+V+G+  S EK   LK   G D   NYK EP +   L + +P
Sbjct: 180 AAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTEP-VGTVLKQEYP 237
Query: 149 EGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL------MQVVGK 202
           EG+D+ +E+VGG M D  +  +   G + V G IS Y  + P G+  +       +++ K
Sbjct: 238 EGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAGTLPAKLLKK 295
Query: 203 RICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAE--------GLEKAPSALVGI 254
              ++GF    +  +Y   +  ++     G LV   D+ +        GLE    A+  +
Sbjct: 296 SASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYM 355
Query: 255 FTGQNVGKQLV 265
           + G+N GK +V
Sbjct: 356 YMGKNTGKIVV 366

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 27/251 (10%)
Query: 31  SWEEFSLIQSPQLLIKILDTSVPL--PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSA 88
           S+ E++++ +       + T VP   P Y  +L + G TAY  L EL    +G+ V V+A
Sbjct: 119 SFAEYTVVPAS------IATPVPSVKPEYLTLL-VSGTTAYISLKELGGLSEGKKVLVTA 171
Query: 89  ASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFP 148
           A+G  GQ   Q  K   C+V+G+  S EK   LK   G D   NYK EP +   L + +P
Sbjct: 172 AAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTEP-VGTVLKQEYP 229
Query: 149 EGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL------MQVVGK 202
           EG+D+ +E+VGG M D  +  +   G + V G IS Y  + P G+  +       +++ K
Sbjct: 230 EGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAGTLPAKLLKK 287
Query: 203 RICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAE--------GLEKAPSALVGI 254
              ++GF    +  +Y   +  ++     G LV   D+ +        GLE    A+  +
Sbjct: 288 SASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYM 347
Query: 255 FTGQNVGKQLV 265
           + G+N GK +V
Sbjct: 348 YMGKNTGKIVV 358

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 27/251 (10%)
Query: 31  SWEEFSLIQSPQLLIKILDTSVPL--PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSA 88
           S+ E++++ +       + T VP   P Y  +L + G TAY  L EL    +G+ V V+A
Sbjct: 98  SFAEYTVVPAS------IATPVPSVKPEYLTLL-VSGTTAYISLKELGGLSEGKKVLVTA 150
Query: 89  ASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFP 148
           A+G  GQ   Q  K   C+V+G+  S EK   LK   G D   NYK EP +   L + +P
Sbjct: 151 AAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTEP-VGTVLKQEYP 208
Query: 149 EGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL------MQVVGK 202
           EG+D+ +E+VGG M D  +  +   G + V G IS Y  + P G+  +       +++ K
Sbjct: 209 EGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAGTLPAKLLKK 266
Query: 203 RICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAE--------GLEKAPSALVGI 254
              ++GF    +  +Y   +  ++     G LV   D+ +        GLE    A+  +
Sbjct: 267 SASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYM 326
Query: 255 FTGQNVGKQLV 265
           + G+N GK +V
Sbjct: 327 YMGKNTGKIVV 337

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           L + G+TA   LH+    K G+YV + AA+G +G ++  + + +G  V+G+  ++EK + 
Sbjct: 126 LMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAET 185
Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
            + K G     NY  +   +        +G+D+ ++++G   L   L  +R  G  A  G
Sbjct: 186 AR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYG 244
Query: 181 MIS 183
             S
Sbjct: 245 HAS 247

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 56  YYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK 115
           Y  G+L +  LTA    +E    KKG+YV + AA+G VG ++ Q +K+ G + +  A + 
Sbjct: 126 YAAGLLQV--LTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD 183
Query: 116 EKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGH 175
           EK+ + K  +G +   N  +E  L   L     +G+D  F++VG    +  L  ++  G 
Sbjct: 184 EKLKIAKE-YGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGV 242
Query: 176 IA----VCGMISQYNIEK 189
                   G+I  ++I +
Sbjct: 243 FVSFGNASGLIPPFSITR 260

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 66  LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
           LTA+  LH + + + G+YV + A    VG    Q  ++ G   + +A S++K+  +  K 
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ-MAEKL 206
Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQY 185
           G    FNYK+E   +A L      G+++  + +GG   +  +  + + G   + G++   
Sbjct: 207 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 266
Query: 186 NIEKP 190
           +I  P
Sbjct: 267 DINGP 271

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 66  LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
           LTA+  LH + + + G+YV + A    VG    Q  ++ G   + +A S++K+  +  K 
Sbjct: 132 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ-MAEKL 190
Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQY 185
           G    FNYK+E   +A L      G+++  + +GG   +  +  + + G   + G++   
Sbjct: 191 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 250
Query: 186 NIEKP 190
           +I  P
Sbjct: 251 DINGP 255

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           +G+P  TAY  L      K GE V V  ASG VG    Q  +  G  ++G+A ++E   +
Sbjct: 151 IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI 210
Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           +    G  + FN++E   +D        +GIDI  E +    L   L  +   G + V G
Sbjct: 211 VLQN-GAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
           GLTA+  L E    + G+ V V   +G V     Q  K  G  V+ ++ S+EK+D     
Sbjct: 174 GLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFA 231
Query: 125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQ 184
            G D   N  EE  ++         G D   E  GG  L   L  +   G I+V G++  
Sbjct: 232 LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG 291
Query: 185 YNIEKPEG 192
           + +  P G
Sbjct: 292 FEVSGPVG 299

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	270
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	1e-152
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	1e-137
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	1e-127
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	2e-79
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-21
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	6e-21
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	5e-20
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	6e-20
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	1e-19
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	2e-19
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	5e-19
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	1e-17
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-17
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	4e-17
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	4e-17
4eye_A	342	Probable oxidoreductase; structural genomics, niai	5e-17
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	8e-17
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-16
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	3e-16
3gms_A	340	Putative NADPH:quinone reductase; structural genom	6e-16
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	3e-15
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	4e-15
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	8e-14
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	4e-13
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	2e-12
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	5e-12
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	1e-11
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	5e-11
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	3e-10
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-09
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-09
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	7e-09
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	1e-08
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	2e-08
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	4e-08
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-07
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	4e-07
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	5e-07
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	1e-06
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-06
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	2e-06
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	5e-06
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	6e-06
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	1e-04
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	4e-04

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score =  428 bits (1104), Expect = e-152
 Identities = 187/270 (69%), Positives = 222/270 (82%), Gaps = 1/270 (0%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLI-QSPQLLIKILDTSVPLPYYTGI 60
           QP+ GYGVS++++S HP+YKK DL+WG+ +WEE+S+I        KI  T VPL YYTG+
Sbjct: 76  QPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGL 135

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           LGMPG+TAY G +E+CSPK+GE VYVSAASGAVGQLVGQ  K++GCYVVGSA SKEKVDL
Sbjct: 136 LGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL 195

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           LK KFGFDDAFNYKEE DL AAL RCFP GIDIYFENVGGKMLDAVL+NM + G IAVCG
Sbjct: 196 LKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCG 255

Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
           MISQYN+E  EGVHNL  ++ KR  ++GF+  DFY +Y KFLE V+  I+EGK+ YVED+
Sbjct: 256 MISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDV 315

Query: 241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           A+GLEKAP ALVG+F G+NVGKQ+V VARE
Sbjct: 316 ADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score =  390 bits (1004), Expect = e-137
 Identities = 105/268 (39%), Positives = 153/268 (57%), Gaps = 5/268 (1%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQL--LIKILDTSVPLPYYTG 59
             + G  V++V++S +  +    +V   + W    +     L  L+      +PL    G
Sbjct: 65  AVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALG 124

Query: 60  ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
            +GMPGLTAY GL E+C  K GE V VSAA+GAVG +VGQ  KL GC VVG+A S EK+ 
Sbjct: 125 TIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA 184

Query: 120 LLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVC 179
            LK + GFD AFNYK    L+ AL +  P+G D YF+NVGG+ L+ VL  M+  G IA+C
Sbjct: 185 YLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAIC 243

Query: 180 GMISQYN-IEKPEGVHNLMQVVGKRICMEGFLAGDFY-HQYPKFLELVMLAIKEGKLVYV 237
           G IS YN +++     +   ++ K++ +EGF+   +      K L  +M  + EGK+ Y 
Sbjct: 244 GAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYH 303

Query: 238 EDIAEGLEKAPSALVGIFTGQNVGKQLV 265
           E + +G E  P+A + +  G N+GK +V
Sbjct: 304 EHVTKGFENMPAAFIEMLNGANLGKAVV 331

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score =  365 bits (940), Expect = e-127
 Identities = 93/279 (33%), Positives = 137/279 (49%), Gaps = 12/279 (4%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTS-WEEFSLIQSPQLLIKILD--TSVPLPYYT 58
           Q + G G+  + +S H N  K D V      W+   ++     L K+        L Y+ 
Sbjct: 78  QVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVIL-DGNSLEKVDPQLVDGHLSYFL 136

Query: 59  GILGMPGLTAYGGLHELCSPKKG--EYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSK 115
           G +GMPGLT+  G+ E      G  + + VS A+GA G + GQ    +GC  VVG   + 
Sbjct: 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH 196

Query: 116 EKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGH 175
           EK  LL  + GFD A NYK++ ++   L    P G+D+YF+NVGG + D V+  M    H
Sbjct: 197 EKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSH 255

Query: 176 IAVCGMISQYNIEKPEGV----HNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKE 231
           I +CG ISQYN + P               + I  E FL  ++  ++   +  +    KE
Sbjct: 256 IILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKE 315

Query: 232 GKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
           GKL   E +  GLE   +A   + TG N+GKQ+V ++ E
Sbjct: 316 GKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  243 bits (622), Expect = 2e-79
 Identities = 76/277 (27%), Positives = 119/277 (42%), Gaps = 25/277 (9%)

Query: 8   GVSKVLDSTHPNYKKDDLVWGLT--SWEEFSLIQSPQLLIKILDTSVP--LPYYTGILGM 63
            V  +  S    Y     V  +   S+ E++++ +           VP   P Y   L +
Sbjct: 94  EVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIAT------PVPSVKPEYLT-LLV 146

Query: 64  PGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH 123
            G TAY  L EL    +G+ V V+AA+G  GQ   Q  K   C+V+G+  S EK   LK 
Sbjct: 147 SGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK- 205

Query: 124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
             G D   NYK E  +   L + +PEG+D+ +E+VGG M D  +  +   G + V G IS
Sbjct: 206 SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFIS 264

Query: 184 QYNIEKPEGV----HNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVED 239
            Y                +++ K   ++GF    +  +Y   +  ++     G LV   D
Sbjct: 265 GYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVD 324

Query: 240 IA--------EGLEKAPSALVGIFTGQNVGKQLVAVA 268
           +          GLE    A+  ++ G+N GK +V + 
Sbjct: 325 LGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP 361

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 90.8 bits (226), Expect = 2e-21
 Identities = 31/175 (17%), Positives = 64/175 (36%), Gaps = 12/175 (6%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
            LTA   + ++   +  +   ++A +  + +L+    K  G   + + R  E++ LLK  
Sbjct: 150 PLTAIA-MFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-D 207

Query: 125 FGFDDAFNYKEEPDLDAALNR-CFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
            G     N K   D +A L      E   I+ + V G +  A+   M       + G + 
Sbjct: 208 IGAAHVLNEKAP-DFEATLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLD 266

Query: 184 QYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYP----KFLELVMLAIKEGKL 234
                    +    Q++ +   +EGF   ++  Q+       +        +G+ 
Sbjct: 267 ----PDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRW 317

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 89.6 bits (223), Expect = 6e-21
 Identities = 41/216 (18%), Positives = 76/216 (35%), Gaps = 15/216 (6%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           LG+   TAY  L +    + G+ V  +A++  VGQ V Q    +G   +   R +  +  
Sbjct: 148 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK 207

Query: 121 LK---HKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIA 177
           L       G +     +E    +            +    VGGK    +L  +   G + 
Sbjct: 208 LSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMV 267

Query: 178 VCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPK------FLELVMLAIKE 231
             G +++  +        +  ++ K + + GF    +   +         L L  L I+ 
Sbjct: 268 TYGGMAKQPVVAS-----VSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDL-IRR 321

Query: 232 GKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267
           G+L         L+   SAL          KQ++ +
Sbjct: 322 GQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM 357

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 87.1 bits (216), Expect = 5e-20
 Identities = 39/223 (17%), Positives = 70/223 (31%), Gaps = 25/223 (11%)

Query: 61  LGMPGLTAYGGLHELCSPKKGE-YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK---- 115
           + +  LTAY  L        G+ +   +  + AVG+   Q  KL+    +   R +    
Sbjct: 147 ISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD 206

Query: 116 EKVDLLKHKFGFDDAFNYKEEPDLD-----AALNRCFPEGIDIYFENVGGKMLDAVLLNM 170
           E V  LK + G        +    +         +       +    VGGK    +   +
Sbjct: 207 EVVASLK-ELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKL 265

Query: 171 RICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPK-----FLELV 225
              G +   G +S   +  P         + K     GF   +      +       +++
Sbjct: 266 NNNGLMLTYGGMSFQPVTIP-----TSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQII 320

Query: 226 MLAIKEGKLVYVEDIA---EGLEKAPSALVGIFTGQNVGKQLV 265
               +EGKL   + I    +G +               GKQL+
Sbjct: 321 AW-YEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLI 362

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 86.5 bits (215), Expect = 6e-20
 Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 13/209 (6%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           + +  LTA+  + +    + G+ V V AA   V     Q  KL G  V+ +A S++K+  
Sbjct: 147 IPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRR 206

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFP-EGIDIYFENVGGKMLDAVLLNMRICGHIAVC 179
            K   G D+  NY   PD    + R    +G D   ++ G    + V+      G IA+ 
Sbjct: 207 AK-ALGADETVNYTH-PDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIA 264

Query: 180 GMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVED 239
           G  S Y             V  +++ + G             L  ++  ++EGKL  V  
Sbjct: 265 GASSGYEGTL-----PFAHVFYRQLSILGSTMAS-----KSRLFPILRFVEEGKLKPVVG 314

Query: 240 IAEGLEKAPSALVGIFTGQNVGKQLVAVA 268
               LE A      +   +  GK ++ V 
Sbjct: 315 QVLPLEAAAEGHRLLEERRVFGKVVLQVG 343

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 85.7 bits (213), Expect = 1e-19
 Identities = 41/207 (19%), Positives = 79/207 (38%), Gaps = 11/207 (5%)

Query: 66  LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
            T +  L ++    +GE V +   +  +G    Q  +  G  V  +A S  K +  + + 
Sbjct: 153 FTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL 211

Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQY 185
           G     NY+ E D  A +     +G+DI  + +G    +  + ++   G +++   +   
Sbjct: 212 GAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLGGA 270

Query: 186 NIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYP-----KFLELVMLAIKEGKLVYVEDI 240
                E V NL  ++ KR+ + G        +         L  V   ++ G +  V   
Sbjct: 271 ---VAEKV-NLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHK 326

Query: 241 AEGLEKAPSALVGIFTGQNVGKQLVAV 267
               E    A   +  G +VGK ++ V
Sbjct: 327 VFAFEDVADAHRLLEEGSHVGKVMLTV 353

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 86.4 bits (214), Expect = 2e-19
 Identities = 48/226 (21%), Positives = 72/226 (31%), Gaps = 30/226 (13%)

Query: 61  LGMPGLTAYGGL--HELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV 118
             +   TAY  L        K+G+ V +  ASG +G    QFVK  G   V    S +K 
Sbjct: 199 SPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE 258

Query: 119 DLLKHKFGFDDAFNYKEEPDLDAALNRCFP-----------------EGIDIYFENVGGK 161
             ++   G D   N  E    D   +                        DI FE+ G  
Sbjct: 259 AAVR-ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV 317

Query: 162 MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKF 221
                ++  R  G +  CG  S Y         +   +  K   + G    +    + + 
Sbjct: 318 TFGLSVIVARRGGTVVTCGSSSGYLHT-----FDNRYLWMKLKKIVGSHGAN----HEEQ 368

Query: 222 LELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267
                L  + G +V        L +A  A   + T + VGK  V  
Sbjct: 369 QATNRL-FESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLC 413

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 85.2 bits (211), Expect = 5e-19
 Identities = 43/226 (19%), Positives = 67/226 (29%), Gaps = 30/226 (13%)

Query: 61  LGMPGLTAYGGLHELCS--PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV 118
            G+   TAY  L        K+G+ V +  ASG +G    QF    G   +    S +K 
Sbjct: 207 PGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 266

Query: 119 DLLKHKFGFDDAFNYKEEPDLDAALNRCFP-----------------EGIDIYFENVGGK 161
           ++ +   G +   +   E                             E IDI FE+ G +
Sbjct: 267 EICR-AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE 325

Query: 162 MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKF 221
              A +   R  G I  C   S Y  E          +      + G    ++       
Sbjct: 326 TFGASVFVTRKGGTITTCASTSGYMHEYD-----NRYLWMSLKRIIGSHFANYRE----- 375

Query: 222 LELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267
                  I +G++         LE    A   +    + GK  V  
Sbjct: 376 AWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLC 421

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 80.3 bits (199), Expect = 1e-17
 Identities = 52/203 (25%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           L   GLTA+  L E    + G+ V V    G V     Q  K  G  V+ ++ S+EK+D 
Sbjct: 170 LPCAGLTAWFALVEKGHLRAGDRVVVQGTGG-VALFGLQIAKATGAEVIVTSSSREKLDR 228

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFP-EGIDIYFENVGGKMLDAVLLNMRICGHIAVC 179
                G D   N  E  D    +       G D   E  GG  L   L  +   G I+V 
Sbjct: 229 AF-ALGADHGINRLE-EDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVI 286

Query: 180 GMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVED 239
           G++  + +  P     +  ++ K   ++G   G         LE ++ A+    L  V D
Sbjct: 287 GVLEGFEVSGP-----VGPLLLKSPVVQGISVGHRRA-----LEDLVGAVDRLGLKPVID 336

Query: 240 IAEGLEKAPSALVGIFTGQNVGK 262
           +     + P AL  +  G   GK
Sbjct: 337 MRYKFTEVPEALAHLDRGP-FGK 358

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 80.0 bits (198), Expect = 2e-17
 Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 21/227 (9%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
             M  +TAY  L E+ + ++G  V V +A G VGQ V Q    V    V    S  K + 
Sbjct: 123 FPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEA 182

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           +K        F+     D    + R   EG+DI  + + G      L  ++  G   + G
Sbjct: 183 IKD--SVTHLFDRNA--DYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYG 238

Query: 181 MISQYNIEKPEGVH-----------NLMQVVGKRICMEGFLAGDFYHQYPK------FLE 223
             +    E                 N +++  +   + GF   +   +  +       +E
Sbjct: 239 SSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVE 298

Query: 224 LVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
            ++    + K+  V D    LE+   A+  I    N+GK ++ V + 
Sbjct: 299 KLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT 345

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 78.8 bits (195), Expect = 4e-17
 Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 1/119 (0%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
            LTA    +E    KKG+YV + AA+G VG ++ Q +K+ G + +  A + EK+ + K +
Sbjct: 133 VLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-E 191

Query: 125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
           +G +   N  +E  L   L     +G+D  F++VG    +  L  ++  G     G  S
Sbjct: 192 YGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNAS 250

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 78.8 bits (195), Expect = 4e-17
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 3/120 (2%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
           G+TA   LH+    K G+YV + AA+G +G ++  + + +G  V+G+  ++EK +  + K
Sbjct: 130 GMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-K 188

Query: 125 FGFDDAFNYKEEPDLDAALNRCFP-EGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
            G     NY  + D    +      +G+D+ ++++G   L   L  +R  G  A  G  S
Sbjct: 189 LGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHAS 247

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 78.4 bits (194), Expect = 5e-17
 Identities = 42/206 (20%), Positives = 70/206 (33%), Gaps = 12/206 (5%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           L     T Y         + GE V V  A+G +G    Q  K +G  V+         + 
Sbjct: 140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEF 199

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           +K   G D      EE    A        G+D+  + +GG   D  +  +   G + V G
Sbjct: 200 VK-SVGADIVLPL-EEGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVG 257

Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFL----ELVMLAIKEGKLVY 236
             +      P     + +++ +   + G   G+F   +  +L      +   + EG    
Sbjct: 258 FAAG---GIPT--IKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEGMRPP 312

Query: 237 VEDIAEGLEKAPSALVGIFTGQNVGK 262
           V      L +   AL     G+  GK
Sbjct: 313 VSARI-PLSEGRQALQDFADGKVYGK 337

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 77.6 bits (192), Expect = 8e-17
 Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 3/122 (2%)

Query: 63  MPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK 122
           + GLT    L +    K GE +   AA+G VG L  Q+ K +G  ++G+  S EK    K
Sbjct: 123 LKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK 182

Query: 123 HKFGFDDAFNYKEEPDLDAALNRCFP-EGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
              G  +  +Y  E D+   +      +   + ++ VG       L ++   G +   G 
Sbjct: 183 -ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGN 240

Query: 182 IS 183
            S
Sbjct: 241 AS 242

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 76.9 bits (190), Expect = 1e-16
 Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 3/120 (2%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
           GLT Y  L +    K  E     AA+G VG +  Q+ K +G  ++G+  + +K      K
Sbjct: 125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-K 183

Query: 125 FGFDDAFNYKEEPDLDAALNRCFP-EGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
            G     NY+EE DL   L      + + + +++VG    +  L  ++  G +   G  S
Sbjct: 184 AGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSS 242

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 76.5 bits (189), Expect = 3e-16
 Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 5/144 (3%)

Query: 66  LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
           LTA+  LH + + + G+YV + A    VG    Q  ++ G   + +A S++K+ + + K 
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 206

Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQY 185
           G    FNYK+E   +A L      G+++  + +GG   +  +  + + G   + G++   
Sbjct: 207 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 266

Query: 186 NIEKPEGVHNLMQVVGKRICMEGF 209
           +I  P       +++ KR  +   
Sbjct: 267 DINGP----LFSKLLFKRGSLITS 286

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 75.3 bits (186), Expect = 6e-16
 Identities = 23/123 (18%), Positives = 54/123 (43%), Gaps = 1/123 (0%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           + +  LTA+    E  + ++ + + V+A   A+G L  Q  +++   ++   R+ +  + 
Sbjct: 125 MYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE 184

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           L  + G     +    P  +  +      G D   +++GG   + +  ++R  GH    G
Sbjct: 185 LL-RLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIG 243

Query: 181 MIS 183
           ++S
Sbjct: 244 LLS 246

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 73.4 bits (181), Expect = 3e-15
 Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 8/143 (5%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           +G+P  TAY  L      K GE V V  ASG VG    Q  +  G  ++G+A ++E   +
Sbjct: 151 IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI 210

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           +  + G  + FN++E   +D        +GIDI  E +    L   L  +   G + V G
Sbjct: 211 VL-QNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269

Query: 181 MISQYNIEKPEGVHNLMQVVGKR 203
                 IE      N    + K 
Sbjct: 270 SRGT--IEI-----NPRDTMAKE 285

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 73.4 bits (180), Expect = 4e-15
 Identities = 35/167 (20%), Positives = 56/167 (33%), Gaps = 12/167 (7%)

Query: 63  MPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK 122
           +  LTA G + E    +    +  +AA+  +GQ++ Q     G  +V   R +E+ DLLK
Sbjct: 155 VNPLTALG-MVETMRLEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK 213

Query: 123 HKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI 182
              G     N      +          G  I F+  GG  L   +L              
Sbjct: 214 -AQGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREY 272

Query: 183 SQYNIEKPEGVH----------NLMQVVGKRICMEGFLAGDFYHQYP 219
           S+Y     + V+             +  G    M G+L   F  +  
Sbjct: 273 SRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLLFPFLQKIG 319

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 69.2 bits (170), Expect = 8e-14
 Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 24/217 (11%)

Query: 63  MPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK 122
           +  +TA+ GL +    + G+ V +    G VG +  Q     G  V  +A     ++ ++
Sbjct: 133 LVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATA-RGSDLEYVR 191

Query: 123 HKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI 182
              G       +E  D  A       +G D+ ++ +GG +LDA    ++  GH+  C   
Sbjct: 192 -DLGATPIDASREPEDYAAEHTA--GQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGW 248

Query: 183 SQYNIEKPEGVHNLMQVVGKRICMEG------FLAGDFYHQYPKFLELVMLAIKEGKL-V 235
                    G H L  +  K+    G       LA +    + + L      ++ GKL  
Sbjct: 249 ---------GTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAP 299

Query: 236 YVEDIAEGLEKAPSALVGIF----TGQNVGKQLVAVA 268
            ++     + +  SA   +       +  GK  + V 
Sbjct: 300 RLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE 336

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 67.4 bits (165), Expect = 4e-13
 Identities = 34/231 (14%), Positives = 71/231 (30%), Gaps = 30/231 (12%)

Query: 61  LGMPGLTAYGGLHEL------------CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYV 108
           L     TA   +  L             +  K  YV V   S A   +  Q ++L G   
Sbjct: 133 LPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIP 192

Query: 109 VGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG----KMLD 164
           + +  S    DL K   G ++ F+Y+  P+L   +       +    + +          
Sbjct: 193 IATC-SPHNFDLAK-SRGAEEVFDYR-APNLAQTIRTYTKNNLRYALDCITNVESTTFCF 249

Query: 165 AVLLNMRICGHIAVCGMISQYNIEKPEGVHNLM---QVVGKRICMEGFLAGDFYHQY--- 218
           A +   R  GH        ++   +     +      + G+              +    
Sbjct: 250 AAIG--RAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQF 307

Query: 219 -PKFLELVMLAIKEGKL--VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266
                 +    +++G+L    +  +  G +     +  +  G+  G++LV 
Sbjct: 308 GEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVV 358

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 65.3 bits (160), Expect = 2e-12
 Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 8/117 (6%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           L   GLTA   L++    K+G+ V + A +G VG L  Q  K  G  V+ +A SK     
Sbjct: 134 LPTAGLTALQALNQA-EVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAF 191

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIA 177
           LK   G +   NY EE  L A         +D   + VGG +    +  ++  G I 
Sbjct: 192 LK-ALGAEQCINYHEEDFLLAI-----STPVDAVIDLVGGDVGIQSIDCLKETGCIV 242

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 63.7 bits (156), Expect = 5e-12
 Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 17/210 (8%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
             +  LTAY  L      + GE V V AA+GA+G    Q  + +G  V+ +A   EK+ L
Sbjct: 107 FPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL 165

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
                G ++A  Y E     A        G+D+  E V GK ++  L  +   G +   G
Sbjct: 166 PL-ALGAEEAATYAEV-PERAKAWG----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIG 218

Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVM---LAIKEGKLVYV 237
                  E        ++++ + + + GF       +    +E  +   L     +L  V
Sbjct: 219 AAEG---EVAPI--PPLRLMRRNLAVLGF-WLTPLLREGALVEEALGFLLPRLGRELRPV 272

Query: 238 EDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267
                   +A +A   +    + GK +V +
Sbjct: 273 VGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 9/119 (7%)

Query: 61  LGMPGLTAYGGLHEL----CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE 116
           L    LTA+  ++++         G+ V +  ASG VG    Q +K    +V     S++
Sbjct: 160 LPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQD 218

Query: 117 KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGH 175
             +L++ K G DD  +YK    ++  L     +  D   +NVGG         ++    
Sbjct: 219 ASELVR-KLGADDVIDYKSG-SVEEQLKS--LKPFDFILDNVGGSTETWAPDFLKKWSG 273

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 61.1 bits (149), Expect = 5e-11
 Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 18/147 (12%)

Query: 65  GLTAYGGLHE------LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV 118
           G+TAY  L +        +  +G+ + +   +G VG +  Q  K  G  V+ +A   E +
Sbjct: 129 GITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI 188

Query: 119 DLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKM-LDAVLLNMRICGHIA 177
           +  K K G D   N+KE   L         E +D  F      M  D ++  ++  GHIA
Sbjct: 189 EWTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIA 245

Query: 178 VCGMISQYNIEKPEGVHNLMQVVGKRI 204
                    I   E   +L  +  K +
Sbjct: 246 T--------IVAFENDQDLNALKPKSL 264

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 49/192 (25%), Positives = 73/192 (38%), Gaps = 38/192 (19%)

Query: 12  VLDSTHPNYKKDDLV----WGL--TSW---EEFSLIQSPQLLIKILDTSVPLP-----YY 57
           V+ S HP +++ D V    + +  T +    E++ +    L        VPLP       
Sbjct: 72  VVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWL--------VPLPKGLTLKE 123

Query: 58  TGILGMPGLTAYGGLHEL---CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS 114
              +G  G TA   +H L       +   V V+ A+G VG L    +   G  V  S   
Sbjct: 124 AMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK 183

Query: 115 KEKVDLLKHKFGFDDAFNYKEEPDLDAALNR-----CFPEGIDIYFENVGGKMLDAVLLN 169
             + D L+   G   A       D+ A   R      +   +D     VGG+ L  VL  
Sbjct: 184 AAEHDYLR-VLG---AKEVLAREDVMAERIRPLDKQRWAAAVD----PVGGRTLATVLSR 235

Query: 170 MRICGHIAVCGM 181
           MR  G +AV G+
Sbjct: 236 MRYGGAVAVSGL 247

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 16/124 (12%), Positives = 36/124 (29%), Gaps = 10/124 (8%)

Query: 62  GMP--GLTAYGGLHEL-----CSPKKGEYVYVSAASGAVGQLVGQFVK-LVGCYVVGSAR 113
            +P   +TA+    +        P     + +   +G VG +  Q  +      V+ +A 
Sbjct: 146 ALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS 205

Query: 114 SKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRIC 173
             E  + +K   G     ++  +P               ++      K    +   +   
Sbjct: 206 RPETQEWVK-SLGAHHVIDHS-KPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ 263

Query: 174 GHIA 177
           G   
Sbjct: 264 GRFC 267

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 38/203 (18%), Positives = 76/203 (37%), Gaps = 15/203 (7%)

Query: 65  GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVK-LVGCYVVGSARSKEKVDLLKH 123
           G+T Y  + +  S    + + V  A G +G +  Q  K + G  ++G    +E V+  K 
Sbjct: 156 GITTYRAVRKA-SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK- 213

Query: 124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG-GKMLDAVLLNMRICGHIAVCGMI 182
           + G D   N   +  L         +G+D   +     K L      +   G   + G+ 
Sbjct: 214 RAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLF 273

Query: 183 SQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAE 242
                   +  ++   +    I   G L G+    +   + L     + GK+  +     
Sbjct: 274 G------ADLHYHAPLITLSEIQFVGSLVGN-QSDFLGIMRLA----EAGKVKPMITKTM 322

Query: 243 GLEKAPSALVGIFTGQNVGKQLV 265
            LE+A  A+  +   + +G+Q++
Sbjct: 323 KLEEANEAIDNLENFKAIGRQVL 345

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 55.7 bits (134), Expect = 7e-09
 Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 26/127 (20%)

Query: 51   SVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVG 110
            SVP+ Y          TAY  L      + GE V + + SG VGQ         GC V  
Sbjct: 1647 SVPIVY---------TTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFT 1697

Query: 111  SARSKEKVDLLKHKF-GFDDA---------FNYKEEPDLDAALNRCFPEGIDIYFENVGG 160
            +  S EK   L+ +F   D+          F   E+  L     +    G+D+   ++  
Sbjct: 1698 TVGSAEKRAYLQARFPQLDETCFANSRDTSF---EQHVLRHTAGK----GVDLVLNSLAE 1750

Query: 161  KMLDAVL 167
            + L A +
Sbjct: 1751 EKLQASV 1757

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 10/82 (12%)

Query: 51  SVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVG 110
           +  + Y         LTA+  L E+     GE V + +A+G VG       K++G  +  
Sbjct: 18  TFGVAY---------LTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYT 68

Query: 111 SARSKEKVDLLKHKFGFDDAFN 132
           +A S  K ++L  + G +   +
Sbjct: 69  TAGSDAKREMLS-RLGVEYVGD 89

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 45/192 (23%), Positives = 73/192 (38%), Gaps = 38/192 (19%)

Query: 12  VLDSTHPNYKKDDLV----WGL--TSW---EEFSLIQSPQLLIKILDTSVPLP-----YY 57
           V+ S  P + + D V    + L  +      E++ +    L        VPLP       
Sbjct: 73  VVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWL--------VPLPQNLSLKE 124

Query: 58  TGILGMPGLTA---YGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS 114
             + G  G TA      L +     +   V V+ A+G VG +    +   G  VV S  +
Sbjct: 125 AMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGN 184

Query: 115 KEKVDLLKHKFGFDDAFNYKEEPDLDAALNR-----CFPEGIDIYFENVGGKMLDAVLLN 169
           +E  D LK + G   A       D+     +      +   +D     VGGK L ++L  
Sbjct: 185 REAADYLK-QLG---ASEVISREDVYDGTLKALSKQQWQGAVD----PVGGKQLASLLSK 236

Query: 170 MRICGHIAVCGM 181
           ++  G +AV G+
Sbjct: 237 IQYGGSVAVSGL 248

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 60/284 (21%), Positives = 91/284 (32%), Gaps = 57/284 (20%)

Query: 12  VLDSTHPNYKKDDLV----WGL--TSW---EEFSLIQSPQLLIKILDTSVPLP-----YY 57
           V  S  P +     V    WG+    W    E + ++   L        V LP       
Sbjct: 69  VHASEDPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWL--------VALPAGLSSRN 120

Query: 58  TGILGMPGLTAYGGLHELCS---PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS 114
             I+G  G TA   +  L       +   V V+ ASG VG      +  +G  V   +  
Sbjct: 121 AMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGR 180

Query: 115 KEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICG 174
           +     LK   G +   +  E  +      + +   ID     VG K+L  VL  M   G
Sbjct: 181 ESTHGYLKS-LGANRILSRDEFAESRPLEKQLWAGAID----TVGDKVLAKVLAQMNYGG 235

Query: 175 HIAVCGMISQYNIE-----------KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLE 223
            +A CG+   + +            + +GV ++M    +R      L  D       F  
Sbjct: 236 CVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDL---PESFYA 292

Query: 224 LVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV 267
                          +I   L  AP     I   Q  G+ LV +
Sbjct: 293 QA-----------ATEI--TLADAPKFADAIINNQVQGRTLVKI 323

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 33/202 (16%), Positives = 57/202 (28%), Gaps = 19/202 (9%)

Query: 63  MPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK 122
            P LTA+    ++    K   V +    GAV  L+ Q +   G  V   + S     L  
Sbjct: 126 CPLLTAWQAFEKI-PLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVSAS-LSQALAA 182

Query: 123 HKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI 182
            K G    +    +            +     F+ V  +   A++ +++  GHI     I
Sbjct: 183 -KRGVRHLYREPSQ----------VTQKYFAIFDAVNSQNAAALVPSLKANGHII---CI 228

Query: 183 SQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLA--IKEGKLVYVEDI 240
                   +          +         GD         +   L   I +GK+      
Sbjct: 229 QDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPD 288

Query: 241 AEGLEKAPSALVGIFTGQNVGK 262
               E+   AL      +    
Sbjct: 289 IFRFEQMIEALDHSEQTKLKTV 310

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 23/192 (11%)

Query: 65  GLTAYGGLHE-LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLK 122
           G+TAY  + +   +   G YV +    G +G +  Q +K++    V+     +EK+ L +
Sbjct: 170 GITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE 228

Query: 123 HKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG-GKMLDAVLLNMRICGHIAVCGM 181
            + G D   + + +P +   +      G+++  + VG    +D     +   G + + G 
Sbjct: 229 -RLGADHVVDARRDP-VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGY 286

Query: 182 ISQYNIEKPEGVH-NLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKL-VYVED 239
                      +    ++V+   +  EG L G+    Y +  ELV LA  +GK+ V V+ 
Sbjct: 287 --------GGELRFPTIRVISSEVSFEGSLVGN----YVELHELVTLA-LQGKVRVEVDI 333

Query: 240 IAEGLEKAPSAL 251
               L++    L
Sbjct: 334 H--KLDEINDVL 343

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 48.9 bits (117), Expect = 5e-07
 Identities = 33/198 (16%), Positives = 79/198 (39%), Gaps = 24/198 (12%)

Query: 78  PKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEE 136
            + G+ V +    G +G      +K  G   V+ S  S+ + +L K + G D   +  +E
Sbjct: 211 IRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-ELGADHVIDPTKE 268

Query: 137 PDLDAALNRCFPEGIDIYFENVGGK-----MLDAVLLNMRICGHIAVCGMISQYNIEKPE 191
             ++A L+     G  ++ E  G        ++ V+   R  G  A   ++++ + + P 
Sbjct: 269 NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRAR--GINATVAIVARADAKIP- 325

Query: 192 GVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY----VEDIAEGLEKA 247
                     +R  + G      +  +P+ + L+   +   K++     +E+I E +++ 
Sbjct: 326 --LTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASGMDMTKIISKTVSMEEIPEYIKRL 383

Query: 248 PSALVGIFTGQNVGKQLV 265
            +        +++ K  +
Sbjct: 384 QT-------DKSLVKVTM 394

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 14/80 (17%)

Query: 51  SVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVG 110
           SVP+ +         LTAY  L +L   + GE + V +A+G VG    Q  + +G  V  
Sbjct: 325 SVPIVF---------LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYA 375

Query: 111 SARSKEKVDLLKHKFGFDDA 130
           +A   +              
Sbjct: 376 TASEDK-----WQAVELSRE 390

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 15/181 (8%)

Query: 77  SPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKE 135
            P  G+ V ++ A G +G L     K  G   V+ S  S  + +L K K G D   N  E
Sbjct: 164 GPISGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINPFE 221

Query: 136 EPDLDAALNRCFPEGIDIYFENVG-GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVH 194
           E  +   ++     G+D++ E  G  K L+  L  +   G +++ G+           + 
Sbjct: 222 EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGL-----YPGKVTID 276

Query: 195 NLMQVVGKRICMEGFLAGDFYHQYPKFLELV---MLAIKE---GKLVYVEDIAEGLEKAP 248
               ++ K + + G      +  +     L+    L +      K    +   E  E   
Sbjct: 277 FNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMR 336

Query: 249 S 249
           +
Sbjct: 337 A 337

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 39/216 (18%), Positives = 72/216 (33%), Gaps = 26/216 (12%)

Query: 44  LIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKL 103
           ++K+      L     +    G TAY    E      G+ V +  A G +G       + 
Sbjct: 161 VLKV-SEKDDLDV-LAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARS 217

Query: 104 VGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAA---LNRCFPEGIDIYFENVG 159
           +G   V+  A S  ++ L + + G D   N +E    +     ++     G D   E  G
Sbjct: 218 LGAENVIVIAGSPNRLKLAE-EIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATG 276

Query: 160 -GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQY 218
             + L      +R  G  +V G+      + P        +V K    +G    D  H +
Sbjct: 277 DSRALLEGSELLRRGGFYSVAGVAVP---QDPVPFKVYEWLVLKNATFKGIWVSDTSH-F 332

Query: 219 PKFLELVMLAIKEGKL---------VYVEDIAEGLE 245
            K + +                   + +++  + LE
Sbjct: 333 VKTVSITS----RNYQLLSKLITHRLPLKEANKALE 364

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 46.0 bits (110), Expect = 5e-06
 Identities = 29/182 (15%), Positives = 62/182 (34%), Gaps = 24/182 (13%)

Query: 79  KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEP 137
             G+ V ++ A G +G +    V+  G   ++ S  +  ++   +  +  D   N  EE 
Sbjct: 163 VSGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PYA-DRLVNPLEE- 218

Query: 138 DLDAALNRCFPEGIDIYFENVG-GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL 196
           DL   + R    G+++  E  G    +   L+ +   G   + G+        P      
Sbjct: 219 DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGI-----PSDPIRFDLA 273

Query: 197 MQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKL---------VYVEDIAEGLEKA 247
            ++V + I   G      +  + +   L    +  G++         + +    E     
Sbjct: 274 GELVMRGITAFGIAGRRLWQTWMQGTAL----VYSGRVDLSPLLTHRLPLSRYREAFGLL 329

Query: 248 PS 249
            S
Sbjct: 330 AS 331

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 45.7 bits (109), Expect = 6e-06
 Identities = 35/190 (18%), Positives = 59/190 (31%), Gaps = 18/190 (9%)

Query: 71  GLH--ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF 127
           GLH   L    + + V +  A G +G L  Q    +G   V     S EK+ L K  FG 
Sbjct: 149 GLHAFHLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGA 206

Query: 128 DDAFNYKEEPDLDAALNRCFPEGIDIYFENVG-GKMLDAVLLNMRICGHIAVCGMISQYN 186
              FN  E                 +  E  G  + ++  +        +A+ G + Q  
Sbjct: 207 MQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQ-- 264

Query: 187 IEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKL---------VYV 237
            +         +++ K + + G           +  E     + E KL            
Sbjct: 265 -DLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSF 323

Query: 238 EDIAEGLEKA 247
           E  A+ +   
Sbjct: 324 ESFAQAVRDI 333

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 42/222 (18%), Positives = 80/222 (36%), Gaps = 23/222 (10%)

Query: 34  EFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSP-KKGEYVYVSAASGA 92
           E+ ++ S + L+ I D     P     L   GLT Y  +  +      G    V    G 
Sbjct: 127 EYMIVDSARHLVPIGDLD---PVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGV-GG 182

Query: 93  VGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGI 151
           +G +  Q ++ V    V+      +++ L + + G D A         DA       +G 
Sbjct: 183 LGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGADAAVKSGAGA-ADAIRELTGGQGA 240

Query: 152 DIYFENVG-GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL 210
              F+ VG    +D     + + GHI+V G+ +               ++     +    
Sbjct: 241 TAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHA------GAHAKVGFFMIPFGASVVTPY 294

Query: 211 AGDFYHQYPKFLELVMLAIKEGKL-VYVEDIAEGLEKAPSAL 251
            G    +  + + L     + G+L ++ E     L++ P+A 
Sbjct: 295 WGT-RSELMEVVALA----RAGRLDIHTETF--TLDEGPAAY 329

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 10/76 (13%)

Query: 80  KGEYVYVSAASGAVGQ-LVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA--FNYKEE 136
           +G  V V+ A+G V   +V Q ++  G  V G+ARS  K+  L+ ++       F     
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEH-GYKVRGTARSASKLANLQKRWDAKYPGRFETAVV 68

Query: 137 PDL------DAALNRC 146
            D+      D  +   
Sbjct: 69  EDMLKQGAYDEVIKGA 84

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	270
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.93
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	99.08
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	99.08
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	99.03
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	99.01
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.8
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.7
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.66
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.58
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.48
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.46
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.44
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.39
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.31
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.3
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.29
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.27
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.25
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.18
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.17
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.17
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.16
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	98.14
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	98.14
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.13
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.12
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	98.12
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	98.12
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	98.12
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	98.11
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.11
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.1
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.1
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.1
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	98.09
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.09
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.08
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.08
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	98.07
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	98.07
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.07
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.07
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	98.05
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.05
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.04
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.04
3imf_A	257	Short chain dehydrogenase; structural genomics, in	98.04
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	98.02
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.02
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	98.02
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.02
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.01
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.01
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	98.01
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	98.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.0
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	98.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	98.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.99
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.99
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.98
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.98
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.98
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.98
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.97
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.97
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.97
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.97
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.97
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.97
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.96
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.96
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.96
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.96
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.95
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.95
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.95
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.94
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.94
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.94
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.94
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.94
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.93
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.93
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.93
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.93
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.93
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.92
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.92
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.92
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.92
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.91
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.91
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.91
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.91
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.91
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.91
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.91
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.91
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.9
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.9
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.9
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.89
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.89
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.89
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.89
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.89
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.89
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.89
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.89
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.89
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.89
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.89
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.88
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.88
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.87
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.87
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.87
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.87
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.87
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.86
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.86
1spx_A	278	Short-chain reductase family member (5L265); paral	97.86
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.86
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.86
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.85
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.85
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.85
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.85
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.84
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.83
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.83
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.83
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.83
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.82
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.82
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.82
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.81
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.81
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.81
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.8
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.8
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.79
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.79
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.79
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.79
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.79
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.79
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.78
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.78
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.78
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.78
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.77
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.77
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.76
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.76
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.76
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.75
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.75
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.75
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.75
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.75
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.74
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.74
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.74
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.73
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.72
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.72
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.71
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.71
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.71
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.71
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.7
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.7
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.7
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.7
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.7
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.7
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	97.69
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.69
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.68
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.68
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.67
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.67
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.66
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.66
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.66
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.66
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.65
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.65
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.64
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.64
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.64
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.63
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.63
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.63
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.62
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.61
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.61
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.6
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.6
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.59
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.59
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	97.59
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.58
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.58
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.58
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.57
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.56
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.56
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.56
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.55
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.55
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.55
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.54
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.53
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.52
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.52
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.5
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.5
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.5
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.49
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.48
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.48
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	97.48
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.47
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.46
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.46
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.46
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.46
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.45
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.45
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.45
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	97.44
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.43
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.42
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.41
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	97.4
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.4
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.4
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.39
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.39
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	97.39
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.38
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.37
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.36
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.36
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.36
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	97.36
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	97.35
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.34
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.34
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.32
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.32
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.31
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	97.3
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	97.29
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	97.29
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.28
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.28
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	97.27
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.26
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.26
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.25
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.24
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.24
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.24
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.23
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.23
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	97.23
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.23
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.23
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.22
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.21
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	97.21
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	97.21
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	97.21
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.21
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	97.2
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	97.2
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	97.19
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.19
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.19
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.18
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	97.18
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.17
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.17
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.17
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.16
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.15
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.12
3l07_A	285	Bifunctional protein fold; structural genomics, ID	97.09
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	97.09
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	97.09
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	97.09
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.09
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	97.08
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.07
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	97.07
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.06
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	97.06
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	97.05
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	97.05
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	97.04
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	97.03
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.03
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.02
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	97.01
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	97.0
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.98
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.98
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.98
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.98
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.97
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.97
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.97
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.96
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	96.95
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.95
2b25_A	336	Hypothetical protein; structural genomics, methyl	96.95
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.95
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.94
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.94
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	96.93
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.93
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.92
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	96.91
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	96.91
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	96.91
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.9
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.9
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.89
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.89
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.89
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.88
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.88
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.88
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.88
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.88
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.86
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.86
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.86
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.84
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.84
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.83
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.83
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.82
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.81
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.81
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.8
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.79
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.78
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.77
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.77
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.77
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.77
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.76
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	96.76
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	96.76
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.76
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	96.76
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.75
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.75
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.74
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.73
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.73
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	96.72
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	96.72
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.72
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.72
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.71
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.7
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.7
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.69
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	96.69
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.69
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.68
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.68
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	96.68
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	96.67
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	96.67
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.67
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	96.66
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.65
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	96.65
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.65
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.64
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	96.63
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.63
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	96.63
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.63
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	96.63
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.62
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	96.62
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.61
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	96.6
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	96.6
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.6
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.6
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.59
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.58
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	96.58
2i7c_A	283	Spermidine synthase; transferase, structural genom	96.58
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.57
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	96.57
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.56
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	96.56
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	96.54
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	96.51
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	96.51
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	96.5
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	96.5
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	96.49
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	96.48
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	96.47
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	96.46
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	96.46
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.46
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	96.44
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.44
2o07_A	304	Spermidine synthase; structural genomics, structur	96.43
2pt6_A	321	Spermidine synthase; transferase, structural genom	96.42
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	96.42
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	96.42
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	96.41
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	96.41
3dxy_A	218	TRNA (guanine-N(7)-)-methyltransferase; rossmann f	96.41
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	96.41

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=3.6e-44  Score=298.94  Aligned_cols=255  Identities=20%  Similarity=0.248  Sum_probs=224.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec--ccceeeEeec-CCccceeccCCCCCcccc---ccccCchhhhHHHHhhhhcCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL--TSWEEFSLIQ-SPQLLIKILDTSVPLPYY---TGILGMPGLTAYGGLHELCSP   78 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~-~~~~~~~~~p~~~~~~~~---~a~l~~~~~ta~~~l~~~~~~   78 (270)
                      +++|+|+++|++|++|++||+|+++  |+|+||++++ ++. ++++ |++++.. +   +|++++.++|||+++.+.+++
T Consensus        70 e~~G~V~~vG~~v~~~~~GdrV~~~~~G~~aey~~v~~~~~-~~~~-P~~~~~~-~~~~aa~~~~~~~ta~~~l~~~~~~  146 (334)
T 3qwb_A           70 EASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGP-VMKL-PKGTSDE-ELKLYAAGLLQVLTALSFTNEAYHV  146 (334)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEEECSSCSBSEEEEETTSS-EEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ceEEEEEEECCCCCCCCCCCEEEEeeCCcceEEEEecCcce-EEEC-CCCCCHH-HhhhhhhhhhHHHHHHHHHHHhccC
Confidence            4567788899999999999999977  9999999999 999 9999 9994433 4   578899999999999888899


Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFEN  157 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~  157 (270)
                      ++|++|||+||+|++|++++|+++..|++|+++++++++++.++ ++|+++++|+++. ++.+.+.+.+++ ++|++|||
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~-~~~~~~~~~~~~~g~D~vid~  224 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINASKE-DILRQVLKFTNGKGVDASFDS  224 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEeCCCc-hHHHHHHHHhCCCCceEEEEC
Confidence            99999999999999999999999999999999999999999998 8999999999887 899999998877 99999999


Q ss_pred             CCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc---ccchHHHHHHHHHHHHCCce
Q 042426          158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF---YHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~  234 (270)
                      +|+..++.++++++++|+++.+|....     +...++...+..+++++.+.+...+   +....+.++++.+++.+|++
T Consensus       225 ~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  299 (334)
T 3qwb_A          225 VGKDTFEISLAALKRKGVFVSFGNASG-----LIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKL  299 (334)
T ss_dssp             CGGGGHHHHHHHEEEEEEEEECCCTTC-----CCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSS
T ss_pred             CChHHHHHHHHHhccCCEEEEEcCCCC-----CCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCc
Confidence            999999999999999999999998542     2223555667788999988766544   22334567899999999999


Q ss_pred             eeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      ++.++++|+++++++|++.+.+++..||+|+++++
T Consensus       300 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          300 NIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             CCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             cCceeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence            99998999999999999999999999999999864

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=3.1e-44  Score=301.19  Aligned_cols=252  Identities=19%  Similarity=0.283  Sum_probs=223.2

Q ss_pred             cceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCC
Q 042426            6 GYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKG   81 (270)
Q Consensus         6 g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g   81 (270)
                      ++|+|+++|++|++|++||+|+++   |+|+||++++++. ++++ |++  +++ ++|+++++++|||+++.+.+++++|
T Consensus        93 ~~G~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~~-P~~--~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  168 (353)
T 4dup_A           93 LSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQ-ILPF-PKG--YDAVKAAALPETFFTVWANLFQMAGLTEG  168 (353)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTT--CCHHHHHTSHHHHHHHHHHHTTTTCCCTT
T ss_pred             cEEEEEEECCCCCCCCCCCEEEEecCCCceeeEEEEcHHH-cEeC-CCC--CCHHHHhhhhhHHHHHHHHHHHhcCCCCC
Confidence            467788899999999999999987   9999999999999 9999 999  665 4888999999999999888999999


Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      ++|||+||+|++|++++|+++..|++|+++++++++++.++ ++|++.++|+++. ++.+.+.+.+++++|++|||+|++
T Consensus       169 ~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~~  246 (353)
T 4dup_A          169 ESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAA  246 (353)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHSSCEEEEEESCCGG
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEeCCch-HHHHHHHHHhCCCceEEEECCCHH
Confidence            99999999999999999999999999999999999999998 8999999999887 898999888844999999999999


Q ss_pred             hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCccc-----chHHHHHHHHHHHHCCceee
Q 042426          162 MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYH-----QYPKFLELVMLAIKEGKLVY  236 (270)
Q Consensus       162 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~  236 (270)
                      .+..++++++++|+++.+|.....    .....+...++.+++++.++.......     ...+.++++.+++++|++++
T Consensus       247 ~~~~~~~~l~~~G~iv~~g~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  322 (353)
T 4dup_A          247 YFERNIASLAKDGCLSIIAFLGGA----VAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAP  322 (353)
T ss_dssp             GHHHHHHTEEEEEEEEECCCTTCS----EEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCC
T ss_pred             HHHHHHHHhccCCEEEEEEecCCC----cccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccC
Confidence            999999999999999999875431    111155677888999999988765421     12234788999999999999


Q ss_pred             eeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          237 VEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       237 ~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      .++++|+++++++|++.+.+++..||+|+++
T Consensus       323 ~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          323 VIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             CEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             CcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999999999999999999999999999975

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=7.2e-44  Score=300.07  Aligned_cols=245  Identities=24%  Similarity=0.274  Sum_probs=220.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------------------------ccceeeEeecCCccceeccCCCCCccc-
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------TSWEEFSLIQSPQLLIKILDTSVPLPY-   56 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------g~~~~~~~v~~~~~~~~~~p~~~~~~~-   56 (270)
                      +++|+|+++|++|++|++||+|++.                           |+|+||+++++++ ++++ |++  +++ 
T Consensus        90 E~~G~V~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~--~~~~  165 (363)
T 3uog_A           90 DMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGW-FVAA-PKS--LDAA  165 (363)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGG-EEEC-CTT--SCHH
T ss_pred             ceEEEEEEECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHH-eEEC-CCC--CCHH
Confidence            4566777899999999999999874                           8999999999999 9999 999  665 


Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCc
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEE  136 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~  136 (270)
                      ++|+++++++|||+++.+.+++++|++|||+| +|++|++++|+|+.+|++|+++++++++++.++ ++|+++++|....
T Consensus       166 ~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~  243 (363)
T 3uog_A          166 EASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-ALGADHGINRLEE  243 (363)
T ss_dssp             HHHTTTTHHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS
T ss_pred             HHhhcccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-HcCCCEEEcCCcc
Confidence            48889999999999998889999999999999 699999999999999999999999999999998 9999999995545


Q ss_pred             hhHHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcc
Q 042426          137 PDLDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFY  215 (270)
Q Consensus       137 ~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (270)
                       ++.+.+++.+++ ++|++|||+|...+..++++++++|+++.+|....     .....+...++.+++++.++...+  
T Consensus       244 -~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~--  315 (363)
T 3uog_A          244 -DWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG-----FEVSGPVGPLLLKSPVVQGISVGH--  315 (363)
T ss_dssp             -CHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSS-----CEECCBTTHHHHTCCEEEECCCCC--
T ss_pred             -cHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCC-----cccCcCHHHHHhCCcEEEEEecCC--
Confidence             899999999888 99999999998899999999999999999998653     123455667888999999988764  


Q ss_pred             cchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          216 HQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       216 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                         .+.++++.+++++|++++.++.+|+++++++|++.+.+++ .||+||++
T Consensus       316 ---~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          316 ---RRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             ---HHHHHHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             ---HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence               5789999999999999999999999999999999999999 99999985

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.9e-43  Score=293.48  Aligned_cols=252  Identities=21%  Similarity=0.281  Sum_probs=221.1

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPK   79 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~   79 (270)
                      +++|+|.++|++|++|++||+|++.    |+|+||+++++++ ++++ |++  +++ ++|++++.++|+|+++.+.++++
T Consensus        64 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~--~~~~~aa~l~~~~~ta~~~l~~~~~~~  139 (325)
T 3jyn_A           64 EGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEAN-LVKL-ADS--VSFEQAAALMLKGLTVQYLLRQTYQVK  139 (325)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEESSSSSCCSBSEEEEEGGG-EEEC-CTT--SCHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred             eeEEEEEEECCCCCCCCCCCEEEEecCCCccccceEEecHHH-eEEC-CCC--CCHHHHhhhhhhHHHHHHHHHHhcCCC
Confidence            4567788899999999999999875    8999999999999 9999 999  665 48889999999999998889999


Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~  158 (270)
                      +|++|||+||+|++|++++|+++..|++|+++++++++++.++ ++|+++++|+++. ++.+.+.+.+++ ++|++|||+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~  217 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGV  217 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEESS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHhCCCCceEEEECC
Confidence            9999999999999999999999999999999999999999998 9999999999887 899999999887 999999999


Q ss_pred             CcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhh-cceeeeccccCc---ccchHHHHHHHHHHHHCCce
Q 042426          159 GGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGK-RICMEGFLAGDF---YHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       159 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~  234 (270)
                      |+..+..++++++++|+++.+|....     +...++...+..+ .+++.+.....+   +....+.++++.+++++|++
T Consensus       218 g~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  292 (325)
T 3jyn_A          218 GQDTWLTSLDSVAPRGLVVSFGNASG-----PVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKL  292 (325)
T ss_dssp             CGGGHHHHHTTEEEEEEEEECCCTTC-----CCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSS
T ss_pred             ChHHHHHHHHHhcCCCEEEEEecCCC-----CCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCe
Confidence            99999999999999999999998652     2223555566666 566655443322   34456678899999999999


Q ss_pred             eeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ++.++++|+++++++|++.+.+++..||+|+.+
T Consensus       293 ~~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          293 KVDGIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             CCCCCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             eCccccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            999889999999999999999999999999864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=8e-44  Score=297.49  Aligned_cols=249  Identities=18%  Similarity=0.203  Sum_probs=215.1

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCcccc-ccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPYY-TGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~~-~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      +++|+|.++|++++ |++||+|+++   |+|+||+++++++ ++++ |++  ++++ +|+++++++|||+++.+.+++++
T Consensus        85 E~~G~V~~vG~~v~-~~vGDrV~~~~~~G~~aey~~v~~~~-~~~i-P~~--~~~~~aa~l~~~~~ta~~~l~~~~~~~~  159 (342)
T 4eye_A           85 ETAGVVRSAPEGSG-IKPGDRVMAFNFIGGYAERVAVAPSN-ILPT-PPQ--LDDAEAVALIANYHTMYFAYARRGQLRA  159 (342)
T ss_dssp             EEEEEEEECCTTSS-CCTTCEEEEECSSCCSBSEEEECGGG-EEEC-CTT--SCHHHHHHHTTHHHHHHHHHHTTSCCCT
T ss_pred             eEEEEEEEECCCCC-CCCCCEEEEecCCCcceEEEEEcHHH-eEEC-CCC--CCHHHHHHhhhHHHHHHHHHHHhcCCCC
Confidence            45667778899999 9999999987   8999999999999 9999 999  6664 78999999999999988899999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g  159 (270)
                      |++|||+|++|++|++++|+++..|++|+++++++++++.++ ++|+++++|++ . ++.+.+.+.+++ ++|++|||+|
T Consensus       160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~v~~~~-~-~~~~~v~~~~~~~g~Dvvid~~g  236 (342)
T 4eye_A          160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVGADIVLPLE-E-GWAKAVREATGGAGVDMVVDPIG  236 (342)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEESS-T-THHHHHHHHTTTSCEEEEEESCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEecCc-h-hHHHHHHHHhCCCCceEEEECCc
Confidence            999999999999999999999999999999999999999998 89999999998 5 899999999888 9999999999


Q ss_pred             cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc----ccchHHHHHHHHHHHHCCcee
Q 042426          160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF----YHQYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~  235 (270)
                      ++.+..++++++++|+++.+|.....     ....+...++.+++++.++....+    +....+.++++.+++++| ++
T Consensus       237 ~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~  310 (342)
T 4eye_A          237 GPAFDDAVRTLASEGRLLVVGFAAGG-----IPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MR  310 (342)
T ss_dssp             --CHHHHHHTEEEEEEEEEC---------------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CC
T ss_pred             hhHHHHHHHhhcCCCEEEEEEccCCC-----CCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CC
Confidence            99999999999999999999875531     122334456778999999886543    344557899999999999 99


Q ss_pred             eeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          236 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       236 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +.++.+|+++++++|++.+.+++..||+|+++
T Consensus       311 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          311 PPVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             CCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999999999999999999999999999974

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=1.6e-42  Score=289.31  Aligned_cols=255  Identities=41%  Similarity=0.672  Sum_probs=221.7

Q ss_pred             ceEEEEeecCCCCCCCCCEEEecccceeeEeecCCccceeccCCCCCccccc--cccCchhhhHHHHhhhhcCCCCCcEE
Q 042426            7 YGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYT--GILGMPGLTAYGGLHELCSPKKGEYV   84 (270)
Q Consensus         7 ~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~p~~~~~~~~~--a~l~~~~~ta~~~l~~~~~~~~g~~v   84 (270)
                      +|+|++  ++|++|++||||++.|+|+||+++++++ ++++ |++++.. ++  |+++++++|||+++.+.+++++|++|
T Consensus        79 ~G~V~~--~~v~~~~vGdrV~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~~a~a~l~~~~~tA~~al~~~~~~~~g~~v  153 (336)
T 4b7c_A           79 VGKVLV--SKHPGFQAGDYVNGALGVQDYFIGEPKG-FYKV-DPSRAPL-PRYLSALGMTGMTAYFALLDVGQPKNGETV  153 (336)
T ss_dssp             EEEEEE--ECSTTCCTTCEEEEECCSBSEEEECCTT-CEEE-CTTTSCG-GGGGTTTSHHHHHHHHHHHHTTCCCTTCEE
T ss_pred             EEEEEe--cCCCCCCCCCEEeccCCceEEEEechHH-eEEc-CCCCCch-HHHhhhcccHHHHHHHHHHHhcCCCCCCEE
Confidence            444544  5799999999999999999999999999 9999 9883222 34  89999999999999888999999999


Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcchHH
Q 042426           85 YVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLD  164 (270)
Q Consensus        85 lI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~  164 (270)
                      ||+|++|++|++++|+++..|++|+++++++++.+.+.+++|+++++|+++. ++.+.+.+.+++++|++|||+|+..+.
T Consensus       154 lI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~  232 (336)
T 4b7c_A          154 VISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILD  232 (336)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTS-CHHHHHHHHCTTCEEEEEESSCHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCH-HHHHHHHHhcCCCceEEEECCCcchHH
Confidence            9999999999999999999999999999999999999339999999999887 899999988866999999999999999


Q ss_pred             HHHHccccCCEEEEEcccccccc-cCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecC
Q 042426          165 AVLLNMRICGHIAVCGMISQYNI-EKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEG  243 (270)
Q Consensus       165 ~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  243 (270)
                      .++++++++|+++.+|....+.. .......+...++.+++++.++....+.....+.++++.+++++|++++.+..+++
T Consensus       233 ~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~  312 (336)
T 4b7c_A          233 TVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEG  312 (336)
T ss_dssp             HHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEEC
T ss_pred             HHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceeeecC
Confidence            99999999999999998653211 01123456677888999999998876655567889999999999999999888899


Q ss_pred             cccHHHHHHHHhcCCccceEEEEe
Q 042426          244 LEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       244 ~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ++++++|++.+.+++..||+|+++
T Consensus       313 l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          313 LETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             GGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCCceEEEeC
Confidence            999999999999999999999975

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.8e-42  Score=289.77  Aligned_cols=250  Identities=20%  Similarity=0.231  Sum_probs=214.8

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS   77 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~   77 (270)
                      +++|+|+++|++|++|++||+|+++      |+|+||++++++. ++++ |++  +++ ++|+++++++|||+++.+.++
T Consensus        66 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~--~~~~~aa~~~~~~~ta~~~l~~~~~  141 (346)
T 3fbg_A           66 DAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERL-VAKA-PKN--ISAEQAVSLPLTGITAYETLFDVFG  141 (346)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGG-EEEC-CSS--SCHHHHTTSHHHHHHHHHHHHTTSC
T ss_pred             ccEEEEEEeCCCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHH-eEEC-CCC--CCHHHhhhcchhHHHHHHHHHHhcC
Confidence            4567788899999999999999984      8999999999999 9999 999  665 488899999999999988899


Q ss_pred             CC------CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426           78 PK------KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        78 ~~------~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      ++      +|++|||+||+|++|++++|+|+..|++|+++++++++++.++ ++|+++++++++  ++.+.+++..++++
T Consensus       142 ~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~--~~~~~~~~~~~~g~  218 (346)
T 3fbg_A          142 ISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KMGADIVLNHKE--SLLNQFKTQGIELV  218 (346)
T ss_dssp             CCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HHTCSEEECTTS--CHHHHHHHHTCCCE
T ss_pred             CccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEECCc--cHHHHHHHhCCCCc
Confidence            98      9999999998999999999999999999999999999999999 899999999875  68888888844499


Q ss_pred             cEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-------ccchHHHHH
Q 042426          152 DIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-------YHQYPKFLE  223 (270)
Q Consensus       152 d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  223 (270)
                      |++|||+|++ .++.++++++++|+++.++...        ...+...+..+++++.+......       .....+.++
T Consensus       219 Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (346)
T 3fbg_A          219 DYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--------NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLE  290 (346)
T ss_dssp             EEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--------SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHH
T ss_pred             cEEEECCCchHHHHHHHHHhccCCEEEEECCCC--------CCCccccccccceEEEEEEEecccccchhhHHHHHHHHH
Confidence            9999999986 5799999999999999887522        12444556678888887654321       122357789


Q ss_pred             HHHHHHHCCceeeeeeeec---CcccHHHHHHHHhcCCccceEEEEecC
Q 042426          224 LVMLAIKEGKLVYVEDIAE---GLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       224 ~~~~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      ++.+++++|++++.++.+|   +++++++|++.+.+++..||+|+++++
T Consensus       291 ~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~  339 (346)
T 3fbg_A          291 DITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE  339 (346)
T ss_dssp             HHHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC--
T ss_pred             HHHHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCC
Confidence            9999999999999988777   999999999999999999999999875

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=1.6e-42  Score=290.88  Aligned_cols=254  Identities=20%  Similarity=0.279  Sum_probs=219.0

Q ss_pred             ccceEEEEeecCC-CCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCcccc-ccccCchhhhHHHHhhhhcCCC
Q 042426            5 SGYGVSKVLDSTH-PNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPYY-TGILGMPGLTAYGGLHELCSPK   79 (270)
Q Consensus         5 ~g~g~v~~vG~~v-~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~~-~a~l~~~~~ta~~~l~~~~~~~   79 (270)
                      +++|+|+++|++| ++|++||+|+++   |+|+||+++++++ ++++ |++  ++++ +|+++++++|||+++.+.++++
T Consensus        86 E~~G~V~~vG~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~--ls~~~aa~l~~~~~tA~~al~~~~~~~  161 (354)
T 2j8z_A           86 EASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGL-LMPI-PEG--LTLTQAAAIPEAWLTAFQLLHLVGNVQ  161 (354)
T ss_dssp             EEEEEEEEECSCC--CCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTT--CCHHHHTTSHHHHHHHHHHHTTTSCCC
T ss_pred             eeEEEEEEECCCcCCCCCCCCEEEEecCCCcceeEEEeCHHH-cEEC-CCC--CCHHHHHhccchHHHHHHHHHHhcCCC
Confidence            4567788899999 999999999987   8999999999999 9999 999  6664 8899999999999998889999


Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~  158 (270)
                      +|++|+|+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+.+.+.+ ++|++|||+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~  239 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCI  239 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-HHHHHHHHHhcCCCceEEEECC
Confidence            9999999999999999999999999999999999999999997 9999989999887 888888888776 899999999


Q ss_pred             CcchHHHHHHccccCCEEEEEcccccccccCCCCccch-HHHHhhcceeeeccccCcccc-----hHHHHHHHHHHHHCC
Q 042426          159 GGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL-MQVVGKRICMEGFLAGDFYHQ-----YPKFLELVMLAIKEG  232 (270)
Q Consensus       159 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g  232 (270)
                      |+..+..++++++++|+++.+|....     ....++. ..++.+++++.++........     ..+.++++++++++|
T Consensus       240 G~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  314 (354)
T 2j8z_A          240 GGSYWEKNVNCLALDGRWVLYGLMGG-----GDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTE  314 (354)
T ss_dssp             CGGGHHHHHHHEEEEEEEEECCCTTC-----SCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC-
T ss_pred             CchHHHHHHHhccCCCEEEEEeccCC-----CccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcC
Confidence            99999999999999999999987542     1223555 677889999999876543211     122345688899999


Q ss_pred             ---ceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          233 ---KLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       233 ---~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                         ++++.++++|+++++++|++.+.+++..||+|+++++
T Consensus       315 ~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  354 (354)
T 2j8z_A          315 GPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELPQ  354 (354)
T ss_dssp             --CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             CCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence               9999999999999999999999998888999998753

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.8e-42  Score=288.95  Aligned_cols=250  Identities=24%  Similarity=0.306  Sum_probs=218.0

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPK   79 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~   79 (270)
                      +++|+|+++|++|++|++||+|++.    |+|+||+++++++ ++++ |++  +++ ++|+++++++|||+++.+.++++
T Consensus        94 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~--l~~~~aA~l~~~~~ta~~al~~~~~~~  169 (351)
T 1yb5_A           94 DVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHT-VYKL-PEK--LDFKQGAAIGIPYFTAYRALIHSACVK  169 (351)
T ss_dssp             CEEEEEEEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGG-EEEC-CTT--SCHHHHTTTHHHHHHHHHHHHTTSCCC
T ss_pred             eeEEEEEEECCCCCCCCCCCEEEEeCCCCCcceeEEEECHHH-eEEC-CCC--CCHHHHHhhhhHHHHHHHHHHHhhCCC
Confidence            5667888899999999999999986    8999999999999 9999 999  665 48899999999999998789999


Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~  158 (270)
                      +|++|+|+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+.+.+++ ++|++|||+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~  247 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV-NYIDKIKKYVGEKGIDIIIEML  247 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTST-THHHHHHHHHCTTCEEEEEESC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HcCCCEEEeCCCc-hHHHHHHHHcCCCCcEEEEECC
Confidence            9999999999999999999999999999999999999999888 9999989999887 888888887776 899999999


Q ss_pred             CcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHHCCceeee
Q 042426          159 GGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIKEGKLVYV  237 (270)
Q Consensus       159 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~  237 (270)
                      |++.+..++++++++|+++.+|...       ....+...++.+++++.++..... +....+.++.+.+++.+|++++.
T Consensus       248 G~~~~~~~~~~l~~~G~iv~~g~~~-------~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~  320 (351)
T 1yb5_A          248 ANVNLSKDLSLLSHGGRVIVVGSRG-------TIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPV  320 (351)
T ss_dssp             HHHHHHHHHHHEEEEEEEEECCCCS-------CEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             ChHHHHHHHHhccCCCEEEEEecCC-------CCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCc
Confidence            9988999999999999999998632       122445667788999998865432 33445667778889999999999


Q ss_pred             eeeecCcccHHHHHHH-HhcCCccceEEEEe
Q 042426          238 EDIAEGLEKAPSALVG-IFTGQNVGKQLVAV  267 (270)
Q Consensus       238 ~~~~~~~~~~~~a~~~-~~~~~~~gk~vv~~  267 (270)
                      ++.+|+++++++|++. +.+++..||+|+++
T Consensus       321 i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          321 IGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             EEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             cceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            9999999999999998 66667789999974

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=2.2e-42  Score=288.04  Aligned_cols=255  Identities=20%  Similarity=0.271  Sum_probs=220.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe----cccceeeEeecCCccceeccCCCCCcccc--ccccCchhhhHHHHhhhhcCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG----LTSWEEFSLIQSPQLLIKILDTSVPLPYY--TGILGMPGLTAYGGLHELCSP   78 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~----~g~~~~~~~v~~~~~~~~~~p~~~~~~~~--~a~l~~~~~ta~~~l~~~~~~   78 (270)
                      +++|+|+++|++|++|++||+|++    .|+|+||+++++++ ++++ |++++.. +  +|+++++++|||+++.+.+++
T Consensus        67 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~~~aa~l~~~~~ta~~~l~~~~~~  143 (333)
T 1wly_A           67 EAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEK-LIKV-PKDLDLD-DVHLAGLMLKGMTAQYLLHQTHKV  143 (333)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECSSSCCCSBSEEEEEGGG-CEEC-CTTCCCC-HHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred             eeEEEEEEECCCCCCCCCCCEEEEecCCCCcceeEEEecHHH-cEeC-CCCCChH-HhCccchhhhHHHHHHHHHHhhCC
Confidence            456778889999999999999976    38999999999999 9999 9994433 5  699999999999999878899


Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFEN  157 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~  157 (270)
                      ++|++|+|+|++|++|++++|+++..|++|+++++++++.+.++ ++|+++++|+++. ++.+.+.+.+.+ ++|++|||
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g~~~~~d~~~~-~~~~~i~~~~~~~~~d~vi~~  221 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDS  221 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCH-HHHHHHHHHhCCCCCeEEEEC
Confidence            99999999999999999999999999999999999999999998 8999989998877 888888887765 89999999


Q ss_pred             CCcchHHHHHHccccCCEEEEEcccccccccCCCCccchH-HHHhhc--ceeeeccccCc--ccchHHHHHHHHHHHHCC
Q 042426          158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLM-QVVGKR--ICMEGFLAGDF--YHQYPKFLELVMLAIKEG  232 (270)
Q Consensus       158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g  232 (270)
                      +|+..++.++++++++|+++.+|....     ....++.. .++.++  +++.|+.....  +....+.++++.+++.+|
T Consensus       222 ~g~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g  296 (333)
T 1wly_A          222 IGKDTLQKSLDCLRPRGMCAAYGHASG-----VADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAG  296 (333)
T ss_dssp             SCTTTHHHHHHTEEEEEEEEECCCTTC-----CCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTT
T ss_pred             CcHHHHHHHHHhhccCCEEEEEecCCC-----CcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCC
Confidence            999999999999999999999987542     12234455 566788  88888755321  222346789999999999


Q ss_pred             ceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          233 KLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       233 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      ++++.++++|+++++++|++.+.+++..||+|+++++
T Consensus       297 ~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          297 VLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             SCCCCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             CcCCCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            9999998999999999999999998889999998764

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=2.1e-42  Score=288.89  Aligned_cols=253  Identities=15%  Similarity=0.248  Sum_probs=215.6

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPK   79 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~   79 (270)
                      -+++|+|+++|++|++|++||+|+++   |+|+||+++++++ ++++ |++  +++ ++|++++.++|||+++.+.++++
T Consensus        68 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~v-P~~--l~~~~aa~l~~~~~ta~~~~~~~~~~~  143 (340)
T 3gms_A           68 YEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADF-VVPI-PDS--IDDFTAAQMYINPLTAWVTCTETLNLQ  143 (340)
T ss_dssp             SCCEEEEEEECTTSCGGGTTCEEEECSSSCSSBSEEEEEGGG-EEEC-CTT--SCHHHHTTSSHHHHHHHHHHHTTSCCC
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEecCCCccceeEEEcCHHH-eEEC-CCC--CCHHHHhhhcchHHHHHHHHHHhcccC
Confidence            35678888899999999999999987   9999999999999 9999 999  666 48889999999999998889999


Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~  158 (270)
                      +|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|+++++|+++. ++.+.+.+.+++ ++|++|||+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~  221 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RLGAAYVIDTSTA-PLYETVMELTNGIGADAAIDSI  221 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hCCCcEEEeCCcc-cHHHHHHHHhCCCCCcEEEECC
Confidence            9999999999889999999999999999999999999999999 8999999999887 899999999887 999999999


Q ss_pred             CcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHH-hhcceeeeccccCc-----ccchHHHHHHHHHHHHCC
Q 042426          159 GGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVV-GKRICMEGFLAGDF-----YHQYPKFLELVMLAIKEG  232 (270)
Q Consensus       159 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g  232 (270)
                      |+.....++++++++|+++.+|.....       ..+...+. ..++.+..+....+     .....+.++++++++++|
T Consensus       222 g~~~~~~~~~~l~~~G~iv~~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  294 (340)
T 3gms_A          222 GGPDGNELAFSLRPNGHFLTIGLLSGI-------QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENE  294 (340)
T ss_dssp             CHHHHHHHHHTEEEEEEEEECCCTTSC-------CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred             CChhHHHHHHHhcCCCEEEEEeecCCC-------CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC
Confidence            998888888999999999999985431       12233322 23444444433221     223457899999999999


Q ss_pred             ceee-eeeeecCcccHHHHHHHHhcCC-ccceEEEEecC
Q 042426          233 KLVY-VEDIAEGLEKAPSALVGIFTGQ-NVGKQLVAVAR  269 (270)
Q Consensus       233 ~~~~-~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~~~  269 (270)
                      ++++ .++.+|+++++++|++.+.+++ ..||+++++.+
T Consensus       295 ~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~  333 (340)
T 3gms_A          295 QLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE  333 (340)
T ss_dssp             SSCCCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred             CCccccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence            9987 4778999999999999999988 45999999865

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=2.4e-42  Score=298.84  Aligned_cols=249  Identities=20%  Similarity=0.203  Sum_probs=218.5

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|+++|++|++|++||+|++                              .|+|+||+++++++ ++++ |++  +
T Consensus       124 E~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~-~~~~-P~~--l  199 (456)
T 3krt_A          124 DLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQ-LMPK-PDH--L  199 (456)
T ss_dssp             CCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEGGG-EEEC-CTT--S
T ss_pred             eeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccceEEechHH-eeEC-CCC--C
Confidence            456888899999999999999986                              28999999999999 9999 999  6


Q ss_pred             cc-cccccCchhhhHHHHhhhh--cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee
Q 042426           55 PY-YTGILGMPGLTAYGGLHEL--CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAF  131 (270)
Q Consensus        55 ~~-~~a~l~~~~~ta~~~l~~~--~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi  131 (270)
                      ++ ++|+++.+++|||+++...  +++++|++|||+|++|++|++++|+|+.+|++|+++++++++++.++ ++|+++++
T Consensus       200 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~-~lGa~~vi  278 (456)
T 3krt_A          200 SWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-AMGAEAII  278 (456)
T ss_dssp             CHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCCEEE
T ss_pred             CHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-hhCCcEEE
Confidence            65 4788888999999998654  78999999999999999999999999999999999999999999998 99999999


Q ss_pred             ecCCchh-----------------HHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCc
Q 042426          132 NYKEEPD-----------------LDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGV  193 (270)
Q Consensus       132 ~~~~~~~-----------------~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  193 (270)
                      |+.+. +                 +.+.+++.+++ ++|+||||+|+..+..++++++++|+++.+|....     ....
T Consensus       279 ~~~~~-d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~  352 (456)
T 3krt_A          279 DRNAE-GYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSG-----YMHE  352 (456)
T ss_dssp             ETTTT-TCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTTC-----SEEE
T ss_pred             ecCcC-cccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCCC-----cccc
Confidence            98764 3                 34788888887 99999999999999999999999999999987542     2233


Q ss_pred             cchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          194 HNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      ++...+..++.++.|+.....     +.+.++++++++|++++.++++|+++++++|++.+.+++..||+||.+.+
T Consensus       353 ~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~~GKvvv~~~~  423 (456)
T 3krt_A          353 YDNRYLWMSLKRIIGSHFANY-----REAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLCLA  423 (456)
T ss_dssp             EEHHHHHHTTCEEEECCSCCH-----HHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEESSC
T ss_pred             cCHHHHHhcCeEEEEeccCCH-----HHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCCCCCcEEEEeCC
Confidence            556677788889998887653     45667999999999999999999999999999999999999999998743

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=1.8e-41  Score=284.02  Aligned_cols=268  Identities=68%  Similarity=1.152  Sum_probs=224.0

Q ss_pred             CCccc---ceEEEE--eecCCCCCCCCCEEEecccceeeEeecCCc-cceeccCC-CCCccccccccCchhhhHHHHhhh
Q 042426            2 QPLSG---YGVSKV--LDSTHPNYKKDDLVWGLTSWEEFSLIQSPQ-LLIKILDT-SVPLPYYTGILGMPGLTAYGGLHE   74 (270)
Q Consensus         2 ~~i~g---~g~v~~--vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~-~~~~~~p~-~~~~~~~~a~l~~~~~ta~~~l~~   74 (270)
                      |.++|   .|++..  ||+++++|++||+|+++|+|+||++++++. .++++ |+ ++++++++|+++++++|||+++.+
T Consensus        71 p~v~G~e~~G~~~~GvV~~~v~~~~vGdrV~~~g~~aey~~v~~~~~~~~~i-p~~~~~~~~~aa~l~~~~~ta~~al~~  149 (345)
T 2j3h_A           71 AYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI-QHTDVPLSYYTGLLGMPGMTAYAGFYE  149 (345)
T ss_dssp             CCCTTSBCEEEEEEEEEEECSTTCCTTCEEEEEEESBSEEEECCCTTTCEEE-CCCSSCTTGGGTTTSHHHHHHHHHHHT
T ss_pred             CcCCCCeeecceEEEEEecCCCCCCCCCEEEeecCceeEEEecccccceeec-CCCCCCHHHHHHhccccHHHHHHHHHH
Confidence            34565   455555  999999999999999999999999998643 27888 74 555676688999999999999988


Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEE
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      .+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.+++++|+++++|+++..++.+.+.+.+++++|++
T Consensus       150 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~v  229 (345)
T 2j3h_A          150 VCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIY  229 (345)
T ss_dssp             TSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEE
T ss_pred             HhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEE
Confidence            88999999999999999999999999999999999999999999998756999988988763267777877765589999


Q ss_pred             EeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCce
Q 042426          155 FENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       155 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  234 (270)
                      |||+|+..++.++++++++|+++.+|..............+...++.+++++.++...++.....+.++++.+++++|++
T Consensus       230 i~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i  309 (345)
T 2j3h_A          230 FENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKI  309 (345)
T ss_dssp             EESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSS
T ss_pred             EECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCC
Confidence            99999989999999999999999998765321111122344567788899998877655444456779999999999999


Q ss_pred             eeeeeeecCcccHHHHHHHHhcCCccceEEEEecCC
Q 042426          235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE  270 (270)
Q Consensus       235 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  270 (270)
                      ++.++.+|+++++++|++.+.+++..||+|++++++
T Consensus       310 ~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~~  345 (345)
T 2j3h_A          310 TYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE  345 (345)
T ss_dssp             CCCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSCC
T ss_pred             cCcccccCCHHHHHHHHHHHHcCCCceEEEEEeCCC
Confidence            988888899999999999999999999999998764

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=6.1e-42  Score=286.38  Aligned_cols=247  Identities=24%  Similarity=0.310  Sum_probs=218.1

Q ss_pred             ccceEEEEeecCCCCCCCCCEEE-------e--------------------c---ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVW-------G--------------------L---TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~-------~--------------------~---g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|+++|++|++|++||+|+       +                    +   |+|+||+++++++ ++++ |++  +
T Consensus        64 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~-~~~~-P~~--~  139 (343)
T 2eih_A           64 DGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEAN-LAPK-PKN--L  139 (343)
T ss_dssp             EEEEEEEEECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGG-EEEC-CTT--S
T ss_pred             ceEEEEEEECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHH-eEEC-CCC--C
Confidence            45677888999999999999998       4                    3   8999999999999 9999 999  6


Q ss_pred             ccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      +++ +|+++.+++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|+++++|+
T Consensus       140 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~~~~d~  218 (343)
T 2eih_A          140 SFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADETVNY  218 (343)
T ss_dssp             CHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEET
T ss_pred             CHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEcC
Confidence            664 77799999999999977689999999999999999999999999999999999999999999998 8999989999


Q ss_pred             CCchhHHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecccc
Q 042426          134 KEEPDLDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAG  212 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (270)
                      ++. ++.+.+.+.+++ ++|++||++|...++.++++++++|+++.+|.....     ...++...++.+++++.|+...
T Consensus       219 ~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~  292 (343)
T 2eih_A          219 THP-DWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMA  292 (343)
T ss_dssp             TST-THHHHHHHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSC-----CCCCCTTHHHHTTCEEEECCSC
T ss_pred             Ccc-cHHHHHHHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----cCccCHHHHHhCCcEEEEecCc
Confidence            887 888888888766 899999999988999999999999999999885431     1224556777899999887643


Q ss_pred             CcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          213 DFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      .     .+.++++++++++|++++.++++|+++++++|++.+.+++..||+|+++
T Consensus       293 ~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          293 S-----KSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             C-----GGGHHHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             c-----HHHHHHHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            2     4668999999999999999989999999999999999988889999975

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.9e-42  Score=288.89  Aligned_cols=257  Identities=23%  Similarity=0.296  Sum_probs=208.8

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      +++|+|+++|++|++|++||+|+++   |+|+||+++++++ ++++ |++  +++ ++|+++++++|||+++.+.+++++
T Consensus        67 e~~G~V~~vG~~v~~~~~GdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~--~~~~~aa~l~~~~~ta~~~l~~~~~~~~  142 (349)
T 4a27_A           67 ECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEF-VYKI-PDD--MSFSEAAAFPMNFVTAYVMLFEVANLRE  142 (349)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTT--SCHHHHHTSHHHHHHHHHHHHTTSCCCT
T ss_pred             eeEEEEEEeCCCCCCCCCCCEEEEecCCCcceEEEEecHHH-eEEC-CCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            3456677799999999999999987   8999999999999 9999 999  565 488899999999999988899999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      |++|||+|++|++|++++|+|+.+| ++|++++ ++++.+.++  +|+++++| ++. ++.+.+++.+++++|++|||+|
T Consensus       143 g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~~~~~-~~~-~~~~~~~~~~~~g~Dvv~d~~g  217 (349)
T 4a27_A          143 GMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVTHLFD-RNA-DYVQEVKRISAEGVDIVLDCLC  217 (349)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSSEEEE-TTS-CHHHHHHHHCTTCEEEEEEECC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCcEEEc-CCc-cHHHHHHHhcCCCceEEEECCC
Confidence            9999999999999999999999985 5899988 667777764  89999998 665 8999999888779999999999


Q ss_pred             cchHHHHHHccccCCEEEEEcccccccccC-----------CCCccchHHHHhhcceeeeccccCc-c-----cchHHHH
Q 042426          160 GKMLDAVLLNMRICGHIAVCGMISQYNIEK-----------PEGVHNLMQVVGKRICMEGFLAGDF-Y-----HQYPKFL  222 (270)
Q Consensus       160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~  222 (270)
                      ++.++.++++++++|+++.+|.........           .....+...++.++.++.++....+ .     ....+.+
T Consensus       218 ~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  297 (349)
T 4a27_A          218 GDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVV  297 (349)
T ss_dssp             -------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHH
T ss_pred             chhHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHH
Confidence            988899999999999999999753211000           0122456677888999988876443 1     2236789


Q ss_pred             HHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecCC
Q 042426          223 ELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE  270 (270)
Q Consensus       223 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  270 (270)
                      +++.+++++|++++.++++|+++++++|++.+.+++..||+|++++++
T Consensus       298 ~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~  345 (349)
T 4a27_A          298 EKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT  345 (349)
T ss_dssp             HHHHHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred             HHHHHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence            999999999999999999999999999999999999999999998764

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=3e-41  Score=283.91  Aligned_cols=257  Identities=30%  Similarity=0.477  Sum_probs=220.6

Q ss_pred             ccceEEEEeecCCC-CCCCCCEEEec--ccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCC
Q 042426            5 SGYGVSKVLDSTHP-NYKKDDLVWGL--TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKG   81 (270)
Q Consensus         5 ~g~g~v~~vG~~v~-~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g   81 (270)
                      +++|+|+++|++|+ +|++||+|+++  |+|+||++++++. ++++ |+.  .. ++|+++.+++|||+++.+.+++++|
T Consensus        90 E~~G~V~~vG~~V~~~~~vGdrV~~~~~G~~aey~~v~~~~-~~~~-P~~--~~-~aaal~~~~~ta~~al~~~~~~~~g  164 (362)
T 2c0c_A           90 EGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASI-ATPV-PSV--KP-EYLTLLVSGTTAYISLKELGGLSEG  164 (362)
T ss_dssp             EEEEEEEEECTTGGGTCCTTCEEEEECSCCSBSEEEEEGGG-CEEC-SSS--CH-HHHTTTTHHHHHHHHHHHHTCCCTT
T ss_pred             eeEEEEEEECCCccCCCCCCCEEEEccCCcceeEEEEcHHH-eEEC-CCC--ch-HhhcccchHHHHHHHHHHhcCCCCC
Confidence            56788888999999 99999999986  9999999999999 9999 886  33 6889999999999999888899999


Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      ++|||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|+++++|+++. ++.+.+++.+++++|++|||+|+.
T Consensus       165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~  242 (362)
T 2c0c_A          165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGA  242 (362)
T ss_dssp             CEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHCTTCEEEEEECSCTH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHhcCCCCCEEEECCCHH
Confidence            99999999999999999999999999999999999999998 8999999999877 888888887755899999999998


Q ss_pred             hHHHHHHccccCCEEEEEcccccccccC---CC--CccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee
Q 042426          162 MLDAVLLNMRICGHIAVCGMISQYNIEK---PE--GVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY  236 (270)
Q Consensus       162 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  236 (270)
                      .++.++++++++|+++.+|.........   +.  ..+ ...++.+++++.|++...+.....+.++++++++++|++++
T Consensus       243 ~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~  321 (362)
T 2c0c_A          243 MFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVC  321 (362)
T ss_dssp             HHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCC
T ss_pred             HHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEe
Confidence            9999999999999999999865321000   00  011 25677889999998765544445678999999999999998


Q ss_pred             eee--------eecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          237 VED--------IAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       237 ~~~--------~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      .+.        ..++++++++|++.+.+++..||+|+++.+
T Consensus       322 ~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          322 EVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             CEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             eeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence            654        567999999999999998889999998754

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-41  Score=285.31  Aligned_cols=240  Identities=19%  Similarity=0.274  Sum_probs=211.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|+++|++|++|++||+|+++                              |+|+||+++++++ ++++ |++  +
T Consensus        80 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~-~~~i-P~~--~  155 (359)
T 1h2b_A           80 ENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRS-VIKL-PKD--I  155 (359)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGG-EEEC-CTT--C
T ss_pred             CceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHh-EEEC-CCC--C
Confidence            4577888899999999999999752                              8999999999999 9999 999  6


Q ss_pred             ccc-cc---ccCchhhhHHHHhhhh-cCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC
Q 042426           55 PYY-TG---ILGMPGLTAYGGLHEL-CSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFD  128 (270)
Q Consensus        55 ~~~-~a---~l~~~~~ta~~~l~~~-~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~  128 (270)
                      +++ +|   +++++++|||+++.+. +++++|++|||+|+ |++|++++|+|+.+ |++|+++++++++++.++ ++|++
T Consensus       156 ~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lGa~  233 (359)
T 1h2b_A          156 SREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGAD  233 (359)
T ss_dssp             CHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCS
T ss_pred             CHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCC
Confidence            654 66   7888999999999765 89999999999999 99999999999999 999999999999999998 99999


Q ss_pred             ceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc---hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcc
Q 042426          129 DAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK---MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRI  204 (270)
Q Consensus       129 ~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  204 (270)
                      +++|+++.  +.+.+++.+++ ++|++|||+|++   .++.++++  ++|+++.+|....     +  .++...++.+++
T Consensus       234 ~vi~~~~~--~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~-----~--~~~~~~~~~~~~  302 (359)
T 1h2b_A          234 HVVDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGE-----L--RFPTIRVISSEV  302 (359)
T ss_dssp             EEEETTSC--HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSC-----C--CCCHHHHHHTTC
T ss_pred             EEEeccch--HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCC-----C--CCCHHHHHhCCc
Confidence            99998863  77788888877 899999999987   77788877  9999999987442     1  355667788999


Q ss_pred             eeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          205 CMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ++.++....     .+.++++++++.+|++++.+ ++|+++++++|++.+.+++..||+|+++
T Consensus       303 ~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          303 SFEGSLVGN-----YVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             EEEECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             EEEEecCCC-----HHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            999887643     57889999999999999988 9999999999999999998889999974

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=5.5e-42  Score=286.47  Aligned_cols=247  Identities=19%  Similarity=0.307  Sum_probs=214.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec--------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhh
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL--------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHEL   75 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~   75 (270)
                      +++|+|+++|++|++|++||+|+++        |+|+||+++++++ ++++ |++  +++ ++|+++++++|||+++.+.
T Consensus        70 E~~G~V~~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~-~~~~-P~~--~~~~~aa~l~~~~~ta~~~l~~~  145 (343)
T 3gaz_A           70 DLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARL-LASK-PAA--LTMRQASVLPLVFITAWEGLVDR  145 (343)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGG-EEEC-CTT--SCHHHHHTSHHHHHHHHHHHTTT
T ss_pred             ceEEEEEEECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHH-eeeC-CCC--CCHHHHHHhhhhHHHHHHHHHHh
Confidence            4566777899999999999999876        7999999999999 9999 999  565 4888999999999999888


Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEE
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIY  154 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v  154 (270)
                      +++++|++|||+||+|++|++++|+++..|++|+++ .++++++.++ ++|++. +| ++. ++.+.+.+.+++ ++|++
T Consensus       146 ~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~-~lGa~~-i~-~~~-~~~~~~~~~~~~~g~D~v  220 (343)
T 3gaz_A          146 AQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVR-DLGATP-ID-ASR-EPEDYAAEHTAGQGFDLV  220 (343)
T ss_dssp             TCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHH-HHTSEE-EE-TTS-CHHHHHHHHHTTSCEEEE
T ss_pred             cCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHH-HcCCCE-ec-cCC-CHHHHHHHHhcCCCceEE
Confidence            999999999999999999999999999999999999 7999999998 999987 77 555 888889888887 99999


Q ss_pred             EeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc------ccchHHHHHHHHHH
Q 042426          155 FENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF------YHQYPKFLELVMLA  228 (270)
Q Consensus       155 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~  228 (270)
                      |||+|++.+..++++++++|+++.+|...         ..+...+..+++++.++.....      +....+.++++.++
T Consensus       221 id~~g~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l  291 (343)
T 3gaz_A          221 YDTLGGPVLDASFSAVKRFGHVVSCLGWG---------THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADAL  291 (343)
T ss_dssp             EESSCTHHHHHHHHHEEEEEEEEESCCCS---------CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHH
T ss_pred             EECCCcHHHHHHHHHHhcCCeEEEEcccC---------ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHH
Confidence            99999999999999999999999998743         2345667788999988754321      22345789999999


Q ss_pred             HHCCceeeeee-eecCcccHHHHHHHHhcCC----ccceEEEEecC
Q 042426          229 IKEGKLVYVED-IAEGLEKAPSALVGIFTGQ----NVGKQLVAVAR  269 (270)
Q Consensus       229 ~~~g~~~~~~~-~~~~~~~~~~a~~~~~~~~----~~gk~vv~~~~  269 (270)
                      +++|++++.++ .+|+++++++|++.+.+++    ..||+|+++..
T Consensus       292 ~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~  337 (343)
T 3gaz_A          292 VQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEG  337 (343)
T ss_dssp             HHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC-
T ss_pred             HHCCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEecc
Confidence            99999999998 6999999999999999876    46899999864

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=8.9e-42  Score=294.96  Aligned_cols=249  Identities=22%  Similarity=0.195  Sum_probs=216.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|+++|++|++|++||+|++                              .|+|+||+++++++ ++++ |++  +
T Consensus       116 E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~-~~~i-P~~--l  191 (447)
T 4a0s_A          116 DCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQ-LLPK-PAH--L  191 (447)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGGG-EEEC-CTT--S
T ss_pred             ceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeecCHHH-cEEC-CCC--C
Confidence            456778889999999999999986                              38999999999999 9999 999  6


Q ss_pred             cc-cccccCchhhhHHHHhhhh--cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee
Q 042426           55 PY-YTGILGMPGLTAYGGLHEL--CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAF  131 (270)
Q Consensus        55 ~~-~~a~l~~~~~ta~~~l~~~--~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi  131 (270)
                      ++ ++|+++.+++|||+++...  +++++|++|||+|++|++|++++|+++..|++|+++++++++++.++ ++|+++++
T Consensus       192 s~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-~lGa~~~i  270 (447)
T 4a0s_A          192 TWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-ALGCDLVI  270 (447)
T ss_dssp             CHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCCCEE
T ss_pred             CHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEE
Confidence            65 4788889999999999643  88999999999999999999999999999999999999999999998 99999888


Q ss_pred             ecCCchh------------------HHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCc
Q 042426          132 NYKEEPD------------------LDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGV  193 (270)
Q Consensus       132 ~~~~~~~------------------~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  193 (270)
                      |+.+. +                  +.+.+.+.+++++|++|||+|...++.++++++++|+++.+|....     ....
T Consensus       271 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~  344 (447)
T 4a0s_A          271 NRAEL-GITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSG-----YLHT  344 (447)
T ss_dssp             EHHHH-TCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTTC-----SEEE
T ss_pred             ecccc-cccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCCC-----cccc
Confidence            87543 3                  3677777774489999999999999999999999999999987542     2233


Q ss_pred             cchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          194 HNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      ++...++.++.++.|+...+     .+.+.++++++++|++++.++++|+++++++|++.+.+++..||+||.+.+
T Consensus       345 ~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~~~  415 (447)
T 4a0s_A          345 FDNRYLWMKLKKIVGSHGAN-----HEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLCMA  415 (447)
T ss_dssp             EEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEESSC
T ss_pred             cCHHHHHhCCCEEEecCCCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCceEEEEEeCC
Confidence            55667788889998887655     356678999999999999999999999999999999999999999998753

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=2.6e-41  Score=282.37  Aligned_cols=244  Identities=19%  Similarity=0.268  Sum_probs=214.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEE-e------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVW-G------------------------------LTSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~-~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|+++|++|++|++||+|+ .                              .|+|+||+++++++ ++++ |++  
T Consensus        64 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~--  139 (340)
T 3s2e_A           64 EGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNY-VGLL-PDK--  139 (340)
T ss_dssp             EEEEEEEEECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTT-SEEC-CTT--
T ss_pred             cceEEEEEECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHH-EEEC-CCC--
Confidence            45667778999999999999993 1                              18999999999999 9999 999  


Q ss_pred             ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      +++ ++|++++++.|||+++ +..++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|+++++|
T Consensus       140 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~i~  216 (340)
T 3s2e_A          140 VGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RLGAEVAVN  216 (340)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEE
T ss_pred             CCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCCEEEe
Confidence            665 4889999999999999 5679999999999997 99999999999999999999999999999998 999999999


Q ss_pred             cCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426          133 YKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      +++. ++.+.+.+ +.+++|++||++|+ ..++.++++++++|+++.+|....      ....+...++.+++++.++..
T Consensus       217 ~~~~-~~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~  288 (340)
T 3s2e_A          217 ARDT-DPAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG------DFGTPIFDVVLKGITIRGSIV  288 (340)
T ss_dssp             TTTS-CHHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSS------EEEEEHHHHHHTTCEEEECCS
T ss_pred             CCCc-CHHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCC------CCCCCHHHHHhCCeEEEEEec
Confidence            9987 88888887 33489999999986 588999999999999999987542      233556778889999999877


Q ss_pred             cCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          212 GDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      .+     .+.++++++++++|++++.+ ..++++++++|++.+.+++..||+||++++
T Consensus       289 ~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          289 GT-----RSDLQESLDFAAHGDVKATV-STAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             CC-----HHHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             CC-----HHHHHHHHHHHHhCCCCceE-EEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            55     57899999999999999875 467999999999999999999999999864

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=1.2e-41  Score=286.36  Aligned_cols=249  Identities=14%  Similarity=0.158  Sum_probs=214.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS   77 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~   77 (270)
                      +++|+|+++|++|++|++||+|+++      |+|+||++++++. ++++ |++  +++ ++|+++++++|||+++.+.++
T Consensus        88 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~--~~~~~aa~l~~~~~ta~~al~~~~~  163 (363)
T 4dvj_A           88 DAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERI-VGRK-PKT--LDWAEAAALPLTSITAWEAFFDRLD  163 (363)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGG-CEEC-CTT--SCHHHHHTSHHHHHHHHHHHHTTSC
T ss_pred             eeEEEEEEeCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHH-eeEC-CCC--CCHHHHHhhhhHHHHHHHHHHHhhC
Confidence            4577788899999999999999975      8999999999999 9999 999  665 488899999999999988888


Q ss_pred             CC-----CCcEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426           78 PK-----KGEYVYVSAASGAVGQLVGQFVKL-VGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        78 ~~-----~g~~vlI~ga~g~vG~~ai~la~~-~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      ++     +|++|||+||+|++|++++|+|+. .|++|+++++++++.+.++ ++|+++++|+++  ++.+.+.+..++++
T Consensus       164 ~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~lGad~vi~~~~--~~~~~v~~~~~~g~  240 (363)
T 4dvj_A          164 VNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SLGAHHVIDHSK--PLAAEVAALGLGAP  240 (363)
T ss_dssp             TTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HTTCSEEECTTS--CHHHHHHTTCSCCE
T ss_pred             cCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC--CHHHHHHHhcCCCc
Confidence            98     899999999999999999999998 5889999999999999998 999999999875  68888888754599


Q ss_pred             cEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-------ccchHHHHH
Q 042426          152 DIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-------YHQYPKFLE  223 (270)
Q Consensus       152 d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  223 (270)
                      |++|||+|++ .++.++++++++|+++.+|...         .++...+..+++++.+......       .....+.++
T Consensus       241 Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~  311 (363)
T 4dvj_A          241 AFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS---------AFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLN  311 (363)
T ss_dssp             EEEEECSCHHHHHHHHHHHSCTTCEEEECSCCS---------SCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHH
T ss_pred             eEEEECCCchhhHHHHHHHhcCCCEEEEECCCC---------ccchHHHhhccceEEEEEeeccccccCcchhhHHHHHH
Confidence            9999999985 8899999999999999986421         2445556678888877554321       112257899


Q ss_pred             HHHHHHHCCceeeeeeeec---CcccHHHHHHHHhcCCccceEEEEecC
Q 042426          224 LVMLAIKEGKLVYVEDIAE---GLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       224 ~~~~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      ++.+++++|++++.+..++   +++++++|++.+.+++..||+|+++..
T Consensus       312 ~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~  360 (363)
T 4dvj_A          312 DVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFG  360 (363)
T ss_dssp             HHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSC
T ss_pred             HHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCcc
Confidence            9999999999999888765   999999999999999999999999753

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=4.8e-42  Score=289.39  Aligned_cols=252  Identities=18%  Similarity=0.231  Sum_probs=213.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCC-----------CCCccc-cccccCchhhhH
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDT-----------SVPLPY-YTGILGMPGLTA   68 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~-----------~~~~~~-~~a~l~~~~~ta   68 (270)
                      +++|+|+++|++|++|++||+|++.    |+|+||+++++++ ++++ |+           +  +++ ++|+++++++||
T Consensus        79 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~~~~~~~~--~~~~~aa~l~~~~~ta  154 (364)
T 1gu7_A           79 EGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDD-FIKL-PNPAQSKANGKPNG--LTINQGATISVNPLTA  154 (364)
T ss_dssp             CCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGG-EEEE-CCHHHHHHTTCSCC--CCHHHHHTCTTHHHHH
T ss_pred             eeEEEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHH-eEEc-CCccccccccccCC--CCHHHHhhccccHHHH
Confidence            5678889999999999999999976    9999999999999 9999 87           6  555 488899999999


Q ss_pred             HHHhhhhcCCCCC-cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHhCCCceeecCC---chhHH
Q 042426           69 YGGLHELCSPKKG-EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK----VDLLKHKFGFDDAFNYKE---EPDLD  140 (270)
Q Consensus        69 ~~~l~~~~~~~~g-~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~----~~~~~~~~g~~~vi~~~~---~~~~~  140 (270)
                      |+++.+.+++++| ++|||+|++|++|++++|+|+.+|++|++++++.++    .+.++ ++|+++++|+++   . ++.
T Consensus       155 ~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~-~~~  232 (364)
T 1gu7_A          155 YLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNNSR-EFG  232 (364)
T ss_dssp             HHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEEEHHHHHCG-GGH
T ss_pred             HHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHH-hcCCeEEEecCccchH-HHH
Confidence            9999877899999 999999999999999999999999999999866554    57777 999999999875   4 788


Q ss_pred             HHHHhHc--CC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc---
Q 042426          141 AALNRCF--PE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF---  214 (270)
Q Consensus       141 ~~i~~~~--~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  214 (270)
                      +.+++.+  ++ ++|++|||+|+.....++++++++|+++.+|....     .....+...++.+++++.++....+   
T Consensus       233 ~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~  307 (364)
T 1gu7_A          233 PTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSF-----QPVTIPTSLYIFKNFTSAGFWVTELLKN  307 (364)
T ss_dssp             HHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSS-----CCEEECHHHHHHSCCEEEECCHHHHHTT
T ss_pred             HHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCC-----CCcccCHHHHhhcCcEEEEEchhHhccc
Confidence            8888877  44 89999999999877789999999999999987542     1223455667789999998876442   


Q ss_pred             -ccchHHHHHHHHHHHHCCceeeeeeeecCcc---cHHHHHHHHhcCCccceEEEEe
Q 042426          215 -YHQYPKFLELVMLAIKEGKLVYVEDIAEGLE---KAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       215 -~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                       +....+.++++.+++++|++++.+..+++++   ++++|++.+.+++..||+|+++
T Consensus       308 ~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          308 NKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             CHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence             1122467899999999999998766777664   9999999999988899999975

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.9e-41  Score=281.72  Aligned_cols=252  Identities=19%  Similarity=0.186  Sum_probs=217.1

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCCCCCcccc-ccccCchhhhHHHHhhhhcCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPYY-TGILGMPGLTAYGGLHELCSPK   79 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~~-~a~l~~~~~ta~~~l~~~~~~~   79 (270)
                      +++|+|+++|++|++|++||+|...    |+|+||++++++. ++++ |++  ++++ +|+++++++|||+++.+.++++
T Consensus        64 E~~G~V~~vG~~v~~~~~GdrV~~~g~~~G~~aey~~v~~~~-~~~i-P~~--l~~~~aa~l~~~~~ta~~al~~~~~~~  139 (327)
T 1qor_A           64 EAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADK-AAIL-PAA--ISFEQAAASFLKGLTVYYLLRKTYEIK  139 (327)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGG-EEEC-CTT--SCHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred             eeEEEEEEECCCCCCCCCCCEEEECCCCCceeeeEEEecHHH-cEEC-CCC--CCHHHHHHhhhHHHHHHHHHHHhhCCC
Confidence            5567788899999999999999543    8999999999999 9999 999  6664 7899999999999998788999


Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~  158 (270)
                      +|++|+|+||+|++|++++|+++..|++|+++++++++.+.++ ++|+++++|+++. ++.+.+.+.+.+ ++|++|||+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~D~vi~~~  217 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSV  217 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEECS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCc-cHHHHHHHHhCCCCceEEEECC
Confidence            9999999999999999999999999999999999999999998 7999989998877 888888888766 899999999


Q ss_pred             CcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhh-cceeeeccccCc---ccchHHHHHHHHHHHHCCce
Q 042426          159 GGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGK-RICMEGFLAGDF---YHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       159 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~  234 (270)
                      |...++.++++++++|+++.+|....     ....++...++.+ ++++.+.....+   .....+.++++.+++.+|++
T Consensus       218 g~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  292 (327)
T 1qor_A          218 GRDTWERSLDCLQRRGLMVSFGNSSG-----AVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVI  292 (327)
T ss_dssp             CGGGHHHHHHTEEEEEEEEECCCTTC-----CCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSS
T ss_pred             chHHHHHHHHHhcCCCEEEEEecCCC-----CCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCc
Confidence            98899999999999999999987542     1123555666667 777765543222   12235678999999999999


Q ss_pred             eeeee--eecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          235 VYVED--IAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       235 ~~~~~--~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ++.++  ++|+++++++|++.+.+++..||+|+++
T Consensus       293 ~~~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          293 KVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             CCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             ccccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99988  8999999999999999988899999874

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.3e-41  Score=281.85  Aligned_cols=239  Identities=26%  Similarity=0.261  Sum_probs=205.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELC   76 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~   76 (270)
                      +++|+|+++|++|++|++||+|+++       |+|+||++++++. ++++ |++  +++ ++|+++++++|||+++ +.+
T Consensus        74 E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~--~~~~~aa~l~~~~~ta~~al-~~~  148 (321)
T 3tqh_A           74 DFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDT-IIQK-LEK--LSFLQAASLPTAGLTALQAL-NQA  148 (321)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGG-EEEC-CTT--SCHHHHHHSHHHHHHHHHHH-HHT
T ss_pred             eeEEEEEEeCCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHH-hccC-CCC--CCHHHHhhhhhHHHHHHHHH-Hhc
Confidence            3457778899999999999999875       8999999999999 9999 999  665 4888999999999999 789


Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchh-HHHHHHhHcCCCccEEE
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPD-LDAALNRCFPEGIDIYF  155 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~i~~~~~~~~d~v~  155 (270)
                      ++++|++|+|+||+|++|++++|+|+.+|++|++++ ++++.+.++ ++|+++++|+++. + +.+.+     +++|++|
T Consensus       149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~~-----~g~D~v~  220 (321)
T 3tqh_A          149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLK-ALGAEQCINYHEE-DFLLAIS-----TPVDAVI  220 (321)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHH-HHTCSEEEETTTS-CHHHHCC-----SCEEEEE
T ss_pred             CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHH-HcCCCEEEeCCCc-chhhhhc-----cCCCEEE
Confidence            999999999999899999999999999999999998 666788888 9999999999886 5 55443     3699999


Q ss_pred             eCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee
Q 042426          156 ENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       156 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  235 (270)
                      ||+|++.+..++++++++|+++.+|.....        ........+++++.++....    ..+.++++.+++.+|+++
T Consensus       221 d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~g~l~  288 (321)
T 3tqh_A          221 DLVGGDVGIQSIDCLKETGCIVSVPTITAG--------RVIEVAKQKHRRAFGLLKQF----NIEELHYLGKLVSEDKLR  288 (321)
T ss_dssp             ESSCHHHHHHHGGGEEEEEEEEECCSTTHH--------HHHHHHHHTTCEEECCCCCC----CHHHHHHHHHHHHTTSSC
T ss_pred             ECCCcHHHHHHHHhccCCCEEEEeCCCCch--------hhhhhhhhcceEEEEEecCC----CHHHHHHHHHHHHCCCcc
Confidence            999998889999999999999998764321        11224556778887754322    257899999999999999


Q ss_pred             eeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426          236 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       236 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      +.++++|+++++++|++.+.+++..||+|+++.
T Consensus       289 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          289 IEISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             CCEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             cccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            999999999999999999999999999999874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=8.1e-41  Score=281.13  Aligned_cols=261  Identities=36%  Similarity=0.606  Sum_probs=221.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-ccceeeEeecCCccceeccCCCC---CccccccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-TSWEEFSLIQSPQLLIKILDTSV---PLPYYTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-g~~~~~~~v~~~~~~~~~~p~~~---~~~~~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      +++|+|++  ++|++|++||+|++. |+|+||+++++++ ++++ |+++   +.++++|+++++++|||+++.+.+++++
T Consensus        83 E~~G~V~~--~~v~~~~vGdrV~~~~G~~aey~~v~~~~-~~~i-P~~~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~  158 (357)
T 2zb4_A           83 GGIGIIEE--SKHTNLTKGDFVTSFYWPWQTKVILDGNS-LEKV-DPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITA  158 (357)
T ss_dssp             EEEEEEEE--ECSTTCCTTCEEEEEEEESBSEEEEEGGG-CEEC-CGGGGTTCGGGGGTTTSHHHHHHHHHHHHHSCCCT
T ss_pred             cEEEEEEe--cCCCCCCCCCEEEecCCCcEEEEEEchHH-ceec-CcccccCchhHHHHhcccHHHHHHHHHHHhcCCCC
Confidence            44566666  889999999999998 8999999999999 9999 9984   1155688999999999999988899999


Q ss_pred             C--cEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           81 G--EYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        81 g--~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      |  ++|||+|++|++|++++|+++..|+ +|+++++++++.+.+++++|+++++|+++. ++.+.+.+.+.+++|++|||
T Consensus       159 g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~-~~~~~~~~~~~~~~d~vi~~  237 (357)
T 2zb4_A          159 GSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDN  237 (357)
T ss_dssp             TSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTS-CHHHHHHHHCTTCEEEEEES
T ss_pred             CCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCch-HHHHHHHHhcCCCCCEEEEC
Confidence            9  9999999999999999999999999 999999999999999844999989999886 88888888876689999999


Q ss_pred             CCcchHHHHHHccccCCEEEEEcccccccccCCCCcc----chHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCc
Q 042426          158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVH----NLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  233 (270)
                      +|+..++.++++++++|+++.+|.........+....    ....++.+++++.++....+.....+.++++.+++.+|+
T Consensus       238 ~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~  317 (357)
T 2zb4_A          238 VGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGK  317 (357)
T ss_dssp             CCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCC
Confidence            9998999999999999999999986532111110000    024667889999988765444445778999999999999


Q ss_pred             eeeeeeeecCcccHHHHHHHHhcCCccceEEEEecCC
Q 042426          234 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE  270 (270)
Q Consensus       234 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  270 (270)
                      +++.+..+|+++++++|++.+.+++..||+|++++++
T Consensus       318 l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~  354 (357)
T 2zb4_A          318 LKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE  354 (357)
T ss_dssp             CCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCC
T ss_pred             CcCccceecCHHHHHHHHHHHHcCCCCceEEEEEecc
Confidence            9998777899999999999999988889999998753

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=8.4e-42  Score=286.97  Aligned_cols=251  Identities=21%  Similarity=0.290  Sum_probs=210.1

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPK   79 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~   79 (270)
                      +++|+|+++|++|++|++||+|++.    |+|+||+++++++ ++++ |++  +++ ++|+++++++|||+++.+.++++
T Consensus        91 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~i-P~~--l~~~~Aa~l~~~~~ta~~~l~~~~~~~  166 (357)
T 1zsy_A           91 EGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEA-LIQV-PSD--IPLQSAATLGVNPCTAYRMLMDFEQLQ  166 (357)
T ss_dssp             CCEEEEEEECTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGG-EEEE-CSS--SCHHHHHHTTSHHHHHHHHHHHSSCCC
T ss_pred             eEEEEEEEeCCCCCCCCCCCEEEEcCCCCccceeEEecCHHH-cEEC-CCC--CCHHHHhhhcccHHHHHHHHHHHhccC
Confidence            5678889999999999999999976    8999999999999 9999 999  665 48889999999999998888999


Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC--CccE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK----EKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE--GIDI  153 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~----~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~--~~d~  153 (270)
                      +|++|||+|++|++|++++|+|+.+|+++++++++.    ++.+.++ ++|+++++|+++.  ..+.+.+.+.+  ++|+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~--~~~~~~~~~~~~~~~Dv  243 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK-SLGAEHVITEEEL--RRPEMKNFFKDMPQPRL  243 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH-HTTCSEEEEHHHH--HSGGGGGTTSSSCCCSE
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH-hcCCcEEEecCcc--hHHHHHHHHhCCCCceE
Confidence            999999999999999999999999999988888653    2467787 9999999987532  22345555544  5999


Q ss_pred             EEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----ccchHHHHHHHHHH
Q 042426          154 YFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YHQYPKFLELVMLA  228 (270)
Q Consensus       154 v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  228 (270)
                      +|||+|++....++++++++|+++.+|....     .....+...+..+++++.+++...+     +....+.++++.++
T Consensus       244 vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l  318 (357)
T 1zsy_A          244 ALNCVGGKSSTELLRQLARGGTMVTYGGMAK-----QPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDL  318 (357)
T ss_dssp             EEESSCHHHHHHHHTTSCTTCEEEECCCCTT-----CCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred             EEECCCcHHHHHHHHhhCCCCEEEEEecCCC-----CCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHH
Confidence            9999999877889999999999999986432     1223555667789999999876532     12234678999999


Q ss_pred             HHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          229 IKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       229 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +.+|++++.+.++|+++++++|++.+.+++..||+|+++
T Consensus       319 ~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          319 IRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            999999998888999999999999999988889999975

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=3.4e-41  Score=285.37  Aligned_cols=250  Identities=18%  Similarity=0.263  Sum_probs=213.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec----------------------------------------------------ccc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL----------------------------------------------------TSW   32 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~----------------------------------------------------g~~   32 (270)
                      +++|+|+++|++|++|++||+|++.                                                    |+|
T Consensus        69 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~  148 (378)
T 3uko_A           69 EAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTF  148 (378)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCS
T ss_pred             cceEEEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcce
Confidence            3457777899999999999999742                                                    489


Q ss_pred             eeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEE
Q 042426           33 EEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVG  110 (270)
Q Consensus        33 ~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~  110 (270)
                      +||++++++. ++++ |++  +++ ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++
T Consensus       149 aey~~v~~~~-~~~i-P~~--~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~  223 (378)
T 3uko_A          149 SQYTVVHDVS-VAKI-DPT--APLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIG  223 (378)
T ss_dssp             BSEEEEEGGG-EEEC-CTT--SCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEE
T ss_pred             EeEEEechhh-eEEC-CCC--CCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE
Confidence            9999999999 9999 999  565 488899999999999988899999999999998 9999999999999999 8999


Q ss_pred             EeCCHHHHHHHHHHhCCCceeecC--CchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEccccccc
Q 042426          111 SARSKEKVDLLKHKFGFDDAFNYK--EEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQYN  186 (270)
Q Consensus       111 ~~~~~~~~~~~~~~~g~~~vi~~~--~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~  186 (270)
                      +++++++++.++ ++|+++++|++  +. ++.+.+++.+++++|++|||+|+ ..++.++++++++ |+++.+|....  
T Consensus       224 ~~~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~--  299 (378)
T 3uko_A          224 IDIDSKKYETAK-KFGVNEFVNPKDHDK-PIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS--  299 (378)
T ss_dssp             ECSCTTHHHHHH-TTTCCEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT--
T ss_pred             EcCCHHHHHHHH-HcCCcEEEccccCch-hHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCC--
Confidence            999999999998 99999999987  45 89999999988899999999998 5889999999996 99999997542  


Q ss_pred             ccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEE
Q 042426          187 IEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQL  264 (270)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~v  264 (270)
                        ......+...++. +.++.|+....+  ...+.++++++++.+|++++  .++++|+++++++|++.+.+++.. |+|
T Consensus       300 --~~~~~~~~~~~~~-~~~i~g~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvv  373 (378)
T 3uko_A          300 --GQEISTRPFQLVT-GRVWKGTAFGGF--KSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCV  373 (378)
T ss_dssp             --TCCEEECTHHHHT-TCEEEECSGGGC--CHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEE
T ss_pred             --CCccccCHHHHhc-CcEEEEEEecCC--CchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEE
Confidence              1222334444444 788888776543  23577899999999999874  578899999999999999988865 999


Q ss_pred             EEecC
Q 042426          265 VAVAR  269 (270)
Q Consensus       265 v~~~~  269 (270)
                      |++++
T Consensus       374 i~~~~  378 (378)
T 3uko_A          374 LDTSK  378 (378)
T ss_dssp             EETTC
T ss_pred             EecCC
Confidence            99864

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-40  Score=281.02  Aligned_cols=249  Identities=19%  Similarity=0.272  Sum_probs=215.1

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe----------------------------------------------------cccc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG----------------------------------------------------LTSW   32 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~----------------------------------------------------~g~~   32 (270)
                      +++|+|+++|++|++|++||+|++                                                    .|+|
T Consensus        66 E~~G~V~~vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~  145 (371)
T 1f8f_A           66 EGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSF  145 (371)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCS
T ss_pred             ccceEEEEeCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccc
Confidence            456777889999999999999974                                                    1789


Q ss_pred             eeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEE
Q 042426           33 EEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVG  110 (270)
Q Consensus        33 ~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~  110 (270)
                      +||+++++++ ++++ |++  +++ ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++
T Consensus       146 aey~~v~~~~-~~~i-P~~--~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~  220 (371)
T 1f8f_A          146 ATYALSRENN-TVKV-TKD--VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIA  220 (371)
T ss_dssp             BSEEEEEGGG-EEEE-CTT--SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEE
T ss_pred             cCeEEechhh-eEEC-CCC--CCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE
Confidence            9999999999 9999 999  555 488899999999999987889999999999996 9999999999999999 7999


Q ss_pred             EeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccC
Q 042426          111 SARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEK  189 (270)
Q Consensus       111 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  189 (270)
                      +++++++++.++ ++|+++++|+++. ++.+.+++.+++++|++||++|. ..++.++++++++|+++.+|....    .
T Consensus       221 ~~~~~~~~~~a~-~lGa~~vi~~~~~-~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~----~  294 (371)
T 1f8f_A          221 VDIVESRLELAK-QLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQL----G  294 (371)
T ss_dssp             EESCHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCST----T
T ss_pred             ECCCHHHHHHHH-HcCCCEEecCCcc-CHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCC----C
Confidence            999999999998 9999999999887 88888988877789999999997 588999999999999999987542    1


Q ss_pred             CCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          190 PEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ....++...++.+++++.++.....  ...+.++++++++++|++++  .++. |+++++++|++.+.+++. +|+|+++
T Consensus       295 ~~~~~~~~~~~~~~~~i~g~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~  370 (371)
T 1f8f_A          295 TTAQFDVNDLLLGGKTILGVVEGSG--SPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKI  370 (371)
T ss_dssp             CCCCCCHHHHHHTTCEEEECSGGGS--CHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEEC
T ss_pred             CccccCHHHHHhCCCEEEEeCCCCC--chHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEee
Confidence            1234566677889999998876432  23577999999999999986  4667 999999999999998875 7999986


Q ss_pred             c
Q 042426          268 A  268 (270)
Q Consensus       268 ~  268 (270)
                      +
T Consensus       371 ~  371 (371)
T 1f8f_A          371 A  371 (371)
T ss_dssp             C
T ss_pred             C
Confidence            4

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=5.9e-41  Score=281.18  Aligned_cols=245  Identities=18%  Similarity=0.254  Sum_probs=215.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|+++|++|++|++||+|+..                               |+|+||+.+++++ ++++ |++  
T Consensus        61 E~aG~V~~vG~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~-~~~i-P~~--  136 (348)
T 4eez_A           61 EGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADY-AVKV-PDG--  136 (348)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-SCBC-CTT--
T ss_pred             eEEEEEEEECceeeecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccc-eeec-CCC--
Confidence            3457778899999999999999641                               7899999999999 9999 999  


Q ss_pred             ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCcee
Q 042426           54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDDAF  131 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~vi  131 (270)
                      +++ ++|+++++++|||.++ +.+++++|++|+|+|+ |++|++++|+++.+ |++|+++++++++++.++ ++|+++++
T Consensus       137 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~Ga~~~i  213 (348)
T 4eez_A          137 LDPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KIGADVTI  213 (348)
T ss_dssp             SCHHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HTTCSEEE
T ss_pred             CCHHHHhhcccceeeEEeee-cccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hcCCeEEE
Confidence            665 5899999999999999 5678999999999997 99999999999866 679999999999999998 99999999


Q ss_pred             ecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426          132 NYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF  209 (270)
Q Consensus       132 ~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (270)
                      |+++. ++.+.+.+.+++ ++|.++|++++ ..+..++++++++|+++.+|....      ....+...++.+++++.|+
T Consensus       214 ~~~~~-~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~gs  286 (348)
T 4eez_A          214 NSGDV-NPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNT------EMTLSVPTVVFDGVEVAGS  286 (348)
T ss_dssp             EC-CC-CHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSC------EEEECHHHHHHSCCEEEEC
T ss_pred             eCCCC-CHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCC------CCccCHHHHHhCCeEEEEE
Confidence            99998 999999999988 99999999987 478999999999999999987542      2346677888899999998


Q ss_pred             cccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          210 LAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      ...+     ++.++++++++++|+++|.+ ++|+++++++|++.+++++..||+||+|+.
T Consensus       287 ~~~~-----~~~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk  340 (348)
T 4eez_A          287 LVGT-----RLDLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFTK  340 (348)
T ss_dssp             CSCC-----HHHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred             ecCC-----HHHHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence            7765     57789999999999999866 689999999999999999999999999864

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=3.4e-41  Score=282.14  Aligned_cols=243  Identities=20%  Similarity=0.241  Sum_probs=211.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-----------------------------------cccceeeEeec-CCccceecc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-----------------------------------LTSWEEFSLIQ-SPQLLIKIL   48 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~-~~~~~~~~~   48 (270)
                      +++|+|+++|++|++|++||+|++                                   .|+|+||++++ ++. ++++ 
T Consensus        63 e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~-~~~~-  140 (345)
T 3jv7_A           63 EGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARH-LVPI-  140 (345)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGG-EEEC-
T ss_pred             ccEEEEEEECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhc-eEeC-
Confidence            456778889999999999999976                                   28999999999 888 9999 


Q ss_pred             CCCCCccccccccCchhhhHHHHhhh-hcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhC
Q 042426           49 DTSVPLPYYTGILGMPGLTAYGGLHE-LCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFG  126 (270)
Q Consensus        49 p~~~~~~~~~a~l~~~~~ta~~~l~~-~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g  126 (270)
                      |+ ++.. ++|+++++++|||+++.+ .+++++|++|+|+|+ |++|++++|+|+.+ |++|+++++++++++.++ ++|
T Consensus       141 p~-~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~lG  216 (345)
T 3jv7_A          141 GD-LDPV-AAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVG  216 (345)
T ss_dssp             TT-CCHH-HHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HTT
T ss_pred             CC-CCHH-HhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcC
Confidence            87 4443 588899999999999977 458999999999998 99999999999998 679999999999999998 999


Q ss_pred             CCceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcc
Q 042426          127 FDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRI  204 (270)
Q Consensus       127 ~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  204 (270)
                      +++++++++  ++.+.+++.+++ ++|++|||+|++ .++.++++++++|+++.+|.....     ...++. .++.+++
T Consensus       217 a~~~i~~~~--~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~-~~~~~~~  288 (345)
T 3jv7_A          217 ADAAVKSGA--GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGA-----HAKVGF-FMIPFGA  288 (345)
T ss_dssp             CSEEEECST--THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTC-----CEEEST-TTSCTTC
T ss_pred             CCEEEcCCC--cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC-----CCCcCH-HHHhCCC
Confidence            999999875  788889988887 999999999996 899999999999999999975531     112332 5667889


Q ss_pred             eeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          205 CMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ++.++...+     .+.++++++++++|++++. .++|+++++++|++.+.+++..||+||++
T Consensus       289 ~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          289 SVVTPYWGT-----RSELMEVVALARAGRLDIH-TETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             EEECCCSCC-----HHHHHHHHHHHHTTCCCCC-EEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             EEEEEecCC-----HHHHHHHHHHHHcCCCceE-EEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            998887654     5789999999999999984 47899999999999999999999999864

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=2.3e-41  Score=285.26  Aligned_cols=247  Identities=17%  Similarity=0.214  Sum_probs=213.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe------------------------------cccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|+++|++|++|++||+|++                              .|+|+||++++++. ++++ |++  +
T Consensus        82 e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~--~  157 (370)
T 4ej6_A           82 EFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQ-AFEI-PLT--L  157 (370)
T ss_dssp             SEEEEEEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-EEEE-CTT--S
T ss_pred             ceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhh-EEEC-CCC--C
Confidence            567888889999999999999986                              28999999999999 9999 999  6


Q ss_pred             cccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      +++.|+++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|+++++|+
T Consensus       158 ~~~~aal~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~  234 (370)
T 4ej6_A          158 DPVHGAFCEPLACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDP  234 (370)
T ss_dssp             CTTGGGGHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHTCSEEECT
T ss_pred             CHHHHhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCCEEECC
Confidence            665455888999999999 7789999999999998 9999999999999999 8999999999999998 9999999999


Q ss_pred             CCchhHHHHHHh---HcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426          134 KEEPDLDAALNR---CFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF  209 (270)
Q Consensus       134 ~~~~~~~~~i~~---~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (270)
                      ++. ++.+.+.+   .+++++|+||||+|. ..++.++++++++|+++.+|....    ......+...++.+++++.|+
T Consensus       235 ~~~-~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~----~~~~~~~~~~~~~~~~~i~g~  309 (370)
T 4ej6_A          235 SAG-DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQ----GEKVEIEPFDILFRELRVLGS  309 (370)
T ss_dssp             TSS-CHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCT----TCCCCCCHHHHHHTTCEEEEC
T ss_pred             CCc-CHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCC----CCccccCHHHHHhCCcEEEEe
Confidence            887 89888888   666799999999996 589999999999999999987543    123456778888999999998


Q ss_pred             cccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCC-ccceEEEEecC
Q 042426          210 LAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQ-NVGKQLVAVAR  269 (270)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~~~  269 (270)
                      ....      ..++++++++++|+++  +.++.+|+++++++|++.+.+++ ..+|+++++++
T Consensus       310 ~~~~------~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~  366 (370)
T 4ej6_A          310 FINP------FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER  366 (370)
T ss_dssp             CSCT------TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred             ccCh------HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence            7644      3378999999999985  56889999999999999998876 56799887753

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=5.9e-41  Score=282.99  Aligned_cols=258  Identities=16%  Similarity=0.190  Sum_probs=211.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-----------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHh
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-----------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGL   72 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-----------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l   72 (270)
                      +++|+|+++|++|++|++||+|++.           |+|+||+++++++ ++++ |++  +++ ++|++++++.|||+++
T Consensus        69 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~-~~~~-P~~--~~~~~aa~~~~~~~ta~~~l  144 (371)
T 3gqv_A           69 DYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRV-WAKI-PKG--LSFEQAAALPAGISTAGLAM  144 (371)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTC-EEEC-CTT--CCHHHHHTSHHHHHHHHHHH
T ss_pred             ccEEEEEEeCCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhh-eEEC-CCC--CCHHHHhhhhhhHHHHHHHH
Confidence            4567777899999999999999875           7999999999999 9999 999  665 4888899999999999


Q ss_pred             hhh-cCC-----------CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHH
Q 042426           73 HEL-CSP-----------KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLD  140 (270)
Q Consensus        73 ~~~-~~~-----------~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  140 (270)
                      .+. .++           ++|++|||+|++|++|++++|+|+..|++|++++ ++++++.++ ++|+++++|+++. ++.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~vi~~~~~-~~~  221 (371)
T 3gqv_A          145 KLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAK-SRGAEEVFDYRAP-NLA  221 (371)
T ss_dssp             HHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTST-THH
T ss_pred             HhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHH-HcCCcEEEECCCc-hHH
Confidence            777 553           8999999999999999999999999999999997 789999998 9999999999987 999


Q ss_pred             HHHHhHcCCCccEEEeCCCc-chHHHHHHcc-ccCCEEEEEcccccccccCC---CCccchHHHHhhcceeeeccccCc-
Q 042426          141 AALNRCFPEGIDIYFENVGG-KMLDAVLLNM-RICGHIAVCGMISQYNIEKP---EGVHNLMQVVGKRICMEGFLAGDF-  214 (270)
Q Consensus       141 ~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-  214 (270)
                      +.+++.+++++|++|||+|+ ..++.+++++ +++|+++.+|..........   ........++.+++++.++..... 
T Consensus       222 ~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~  301 (371)
T 3gqv_A          222 QTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGS  301 (371)
T ss_dssp             HHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCC
T ss_pred             HHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeecccccccccccccccc
Confidence            99999988889999999998 5789999999 58999999986442110000   011112346678888888755432 


Q ss_pred             ---ccchHHHHHHHHHHHHCCceeeeeee--ecCcccHHHHHHHHhcCCccc-eEEEEecC
Q 042426          215 ---YHQYPKFLELVMLAIKEGKLVYVEDI--AEGLEKAPSALVGIFTGQNVG-KQLVAVAR  269 (270)
Q Consensus       215 ---~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~a~~~~~~~~~~g-k~vv~~~~  269 (270)
                         .....++++++.+++++|++++.+..  .|+++++++|++.+.+++..| |+|+++++
T Consensus       302 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~  362 (371)
T 3gqv_A          302 EEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG  362 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence               12234566789999999999987554  489999999999999998877 66777654

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=2e-40  Score=280.23  Aligned_cols=247  Identities=19%  Similarity=0.239  Sum_probs=209.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE   33 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~   33 (270)
                      +++|+|+++|++|++|++||+|++.                                                   |+|+
T Consensus        69 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~a  148 (373)
T 1p0f_A           69 EAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFT  148 (373)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSB
T ss_pred             CceEEEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccce
Confidence            4567788899999999999999752                                                   7899


Q ss_pred             eeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEe
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSA  112 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~  112 (270)
                      ||+++++++ ++++ |++  +++++|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus       149 ey~~v~~~~-~~~i-P~~--l~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~  223 (373)
T 1p0f_A          149 EYTVVADIA-VAKI-DPK--APLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVG  223 (373)
T ss_dssp             SEEEEETTS-EEEE-CTT--CCGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             eEEEEchhh-EEEC-CCC--CChhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC
Confidence            999999999 9999 999  555577788899999999888899999999999996 9999999999999999 899999


Q ss_pred             CCHHHHHHHHHHhCCCceeecCC--chhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEccccccccc
Q 042426          113 RSKEKVDLLKHKFGFDDAFNYKE--EPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQYNIE  188 (270)
Q Consensus       113 ~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  188 (270)
                      +++++++.++ ++|+++++|+++  . ++.+.+++.+++++|+||||+|. ..++.++++++++ |+++.+|....    
T Consensus       224 ~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----  297 (373)
T 1p0f_A          224 THKDKFPKAI-ELGATECLNPKDYDK-PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP----  297 (373)
T ss_dssp             SCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCT----
T ss_pred             CCHHHHHHHH-HcCCcEEEecccccc-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCC----
Confidence            9999999998 999999999874  4 68888988887789999999997 5889999999999 99999987542    


Q ss_pred             CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          189 KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                      .....++...++.++ ++.++....+.   .+.++++++++.+|+++  +.++++|+++++++|++.+.+++. +|+|++
T Consensus       298 ~~~~~~~~~~~~~~~-~i~g~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~  372 (373)
T 1p0f_A          298 NERLPLDPLLLLTGR-SLKGSVFGGFK---GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMI  372 (373)
T ss_dssp             TCCEEECTHHHHTTC-EEEECSGGGCC---GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEE
T ss_pred             CCccccCHHHhccCc-eEEeeccCCcC---HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEe
Confidence            112234455566677 88887654321   15688999999999987  467789999999999999988774 799987


Q ss_pred             e
Q 042426          267 V  267 (270)
Q Consensus       267 ~  267 (270)
                      +
T Consensus       373 ~  373 (373)
T 1p0f_A          373 Y  373 (373)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=6.7e-42  Score=311.97  Aligned_cols=251  Identities=18%  Similarity=0.224  Sum_probs=219.0

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec--ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL--TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      .|++|+|+++|++|++|++||+|+++  |+|+||++++++. ++++ |++  +++ ++|+++++++|||+++.+.+++++
T Consensus       270 ~E~aG~V~~vG~~V~~~~vGDrV~~~~~G~~ae~~~v~~~~-~~~i-P~~--ls~~~AA~l~~~~~Ta~~al~~~a~l~~  345 (795)
T 3slk_A          270 SEGAGVVVETGPGVTGLAPGDRVMGMIPKAFGPLAVADHRM-VTRI-PAG--WSFARAASVPIVFLTAYYALVDLAGLRP  345 (795)
T ss_dssp             CCEEEEEEEECSSCCSSCTTCEEEECCSSCSSSEEEEETTS-EEEC-CTT--CCHHHHHHHHHHHHHHHCCCCCCTCCCT
T ss_pred             ceeEEEEEEeCCCCCcCCCCCEEEEEecCCCcCEEEeehHH-EEEC-CCC--CCHHHHHhhhHHHHHHHHHHHHHhCCCC
Confidence            46788899999999999999999998  9999999999999 9999 999  666 499999999999999988999999


Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g  159 (270)
                      |++|||+|++|++|++++|+|+.+|++|+++++++ +.+.+  ++|+++++++++. ++.+.+.+.+++ |+|+||||+|
T Consensus       346 G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l--~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~g  421 (795)
T 3slk_A          346 GESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV--ELSREHLASSRTC-DFEQQFLGATGGRGVDVVLNSLA  421 (795)
T ss_dssp             TCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS--CSCGGGEECSSSS-THHHHHHHHSCSSCCSEEEECCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh--hcChhheeecCCh-hHHHHHHHHcCCCCeEEEEECCC
Confidence            99999999999999999999999999999999654 55554  3899999999988 999999999988 9999999999


Q ss_pred             cchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHHCCceeeee
Q 042426          160 GKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIKEGKLVYVE  238 (270)
Q Consensus       160 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~  238 (270)
                      ++.++.++++++++|+++.+|..+..       .........+++++.++++... +....+.++++.+++++|++++.+
T Consensus       422 g~~~~~~l~~l~~~Gr~v~iG~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~  494 (795)
T 3slk_A          422 GEFADASLRMLPRGGRFLELGKTDVR-------DPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLP  494 (795)
T ss_dssp             TTTTHHHHTSCTTCEEEEECCSTTCC-------CHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCC
T ss_pred             cHHHHHHHHHhcCCCEEEEecccccc-------CcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCc
Confidence            99999999999999999999874421       1111222346777777765432 344567899999999999999999


Q ss_pred             eeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          239 DIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       239 ~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      .++|+++++++|++.+++++..||+||++.+
T Consensus       495 ~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~~  525 (795)
T 3slk_A          495 VTAWDVRQAPEALRHLSQARHVGKLVLTMPP  525 (795)
T ss_dssp             EEEEEGGGHHHHHHHHHHTCCCBEEEEECCC
T ss_pred             ceeEcHHHHHHHHHHHhcCCccceEEEecCc
Confidence            9999999999999999999999999999753

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=2.8e-42  Score=289.08  Aligned_cols=249  Identities=17%  Similarity=0.199  Sum_probs=212.4

Q ss_pred             ccceEEEEeecCC-CCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhc
Q 042426            5 SGYGVSKVLDSTH-PNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELC   76 (270)
Q Consensus         5 ~g~g~v~~vG~~v-~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~   76 (270)
                      +++|+|+++|++| ++|++||+|++.      |+|+||+++++++ ++++ |++  +++ ++|++++.++|||.++ +.+
T Consensus        86 E~~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~--~~~~~aa~l~~~~~ta~~~~-~~~  160 (349)
T 3pi7_A           86 EGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAA-CIPL-LDT--VRDEDGAAMIVNPLTAIAMF-DIV  160 (349)
T ss_dssp             EEEEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGG-EEEC-CTT--CCC--GGGSSHHHHHHHHHH-HHH
T ss_pred             eEEEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHH-eEEC-CCC--CCHHHHhhccccHHHHHHHH-HHH
Confidence            4567777899999 999999999974      8999999999999 9999 999  555 5888999999999766 455


Q ss_pred             CCCCC-cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEE
Q 042426           77 SPKKG-EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIY  154 (270)
Q Consensus        77 ~~~~g-~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v  154 (270)
                      + ++| ++++|+||+|++|++++|+|+..|++|+++++++++++.++ ++|+++++|+++. ++.+.+++.+++ ++|++
T Consensus       161 ~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~v~~~~~~~g~D~v  237 (349)
T 3pi7_A          161 K-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAHVLNEKAP-DFEATLREVMKAEQPRIF  237 (349)
T ss_dssp             H-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCSEEEETTST-THHHHHHHHHHHHCCCEE
T ss_pred             h-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCcH-HHHHHHHHHhcCCCCcEE
Confidence            5 666 79999999999999999999999999999999999999998 9999999999887 899999998876 89999


Q ss_pred             EeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccch-HHHHhhcceeeeccccCc----ccchHHHHHHHHHHH
Q 042426          155 FENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL-MQVVGKRICMEGFLAGDF----YHQYPKFLELVMLAI  229 (270)
Q Consensus       155 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  229 (270)
                      |||+|++.+..++++++++|+++.+|....     .....+. ..++.+++++.+++...+    +....+.++++.+++
T Consensus       238 id~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~  312 (349)
T 3pi7_A          238 LDAVTGPLASAIFNAMPKRARWIIYGRLDP-----DATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRF  312 (349)
T ss_dssp             EESSCHHHHHHHHHHSCTTCEEEECCCSCC-----SCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTT
T ss_pred             EECCCChhHHHHHhhhcCCCEEEEEeccCC-----CCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHH
Confidence            999999888999999999999999997543     2223455 678889999999887654    122357788999999


Q ss_pred             HCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          230 KEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       230 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ++|++++.++++|+++++++|++. .+++..||+|+++
T Consensus       313 ~~g~l~~~i~~~~~l~~~~~A~~~-~~~~~~gKvvl~p  349 (349)
T 3pi7_A          313 SDGRWSTDVTAVVPLAEAIAWVPA-ELTKPNGKVFIRP  349 (349)
T ss_dssp             TTSSCCC-CCEEEEHHHHHHHHHH-HHTSSSSCEEEEC
T ss_pred             HcCCcccccceEEcHHHHHHHHHH-HhCCCCceEEEeC
Confidence            999999999999999999999995 4455679999974

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=2.3e-40  Score=276.31  Aligned_cols=244  Identities=21%  Similarity=0.283  Sum_probs=214.0

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|+++|++|++|++||+|++                               .|+|+||+++++++ ++++ |++  
T Consensus        62 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~--  137 (339)
T 1rjw_A           62 EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADY-VVKI-PDN--  137 (339)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-CEEC-CTT--
T ss_pred             cceEEEEEECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHH-EEEC-CCC--
Confidence            456778889999999999999974                               17899999999999 9999 999  


Q ss_pred             ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      +++ ++|++++++.|||+++.+. ++++|++|||+|+ |++|++++|+++.+|++|+++++++++++.++ ++|+++++|
T Consensus       138 ~~~~~aa~l~~~~~ta~~~l~~~-~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~d  214 (339)
T 1rjw_A          138 LSFEEAAPIFCAGVTTYKALKVT-GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVN  214 (339)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHH-TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEEC
T ss_pred             CCHHHhhhhhhhHHHHHHHHHhc-CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEec
Confidence            665 4889999999999999654 8999999999999 88999999999999999999999999999998 899999999


Q ss_pred             cCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426          133 YKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      +++. ++.+.+.+.+ +++|++||++|. ..++.++++++++|+++.+|....     + ...+...++.+++++.++..
T Consensus       215 ~~~~-~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~i~g~~~  286 (339)
T 1rjw_A          215 PLKE-DAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE-----E-MPIPIFDTVLNGIKIIGSIV  286 (339)
T ss_dssp             TTTS-CHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS-----E-EEEEHHHHHHTTCEEEECCS
T ss_pred             CCCc-cHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC-----C-CccCHHHHHhCCcEEEEecc
Confidence            8876 8888887776 579999999997 688999999999999999987542     1 23556677789999998766


Q ss_pred             cCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          212 GDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      ..     .+.++++++++.+|++++.+ .+|+++++++|++.+.+++..||+|+++++
T Consensus       287 ~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          287 GT-----RKDLQEALQFAAEGKVKTII-EVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             CC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             CC-----HHHHHHHHHHHHcCCCCccE-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            44     46789999999999999864 689999999999999998889999999865

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=1.5e-40  Score=279.17  Aligned_cols=245  Identities=16%  Similarity=0.135  Sum_probs=209.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|+++|++|++|++||||++                               .|+|+||+++++++ ++++ |++  
T Consensus        70 E~~G~V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~--  145 (356)
T 1pl8_A           70 EASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF-CYKL-PDN--  145 (356)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTT--
T ss_pred             ceEEEEEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHH-EEEC-cCC--
Confidence            456778889999999999999985                               28999999999999 9999 999  


Q ss_pred             ccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      ++++.|++..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|+++++|
T Consensus       146 l~~~~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~  222 (356)
T 1pl8_A          146 VTFEEGALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQ  222 (356)
T ss_dssp             SCHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEE
T ss_pred             CCHHHHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEc
Confidence            6665444557889999999 6789999999999996 9999999999999999 9999999999999998 999999999


Q ss_pred             cC---CchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeee
Q 042426          133 YK---EEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEG  208 (270)
Q Consensus       133 ~~---~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (270)
                      ++   .. ++.+.+.+.+++++|++||++|.. .++.++++++++|+++.+|...      ....++...++.+++++.+
T Consensus       223 ~~~~~~~-~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~------~~~~~~~~~~~~~~~~i~g  295 (356)
T 1pl8_A          223 ISKESPQ-EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGS------EMTTVPLLHAAIREVDIKG  295 (356)
T ss_dssp             CSSCCHH-HHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCC------SCCCCCHHHHHHTTCEEEE
T ss_pred             Ccccccc-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCC------CCCccCHHHHHhcceEEEE
Confidence            87   34 777788777656899999999985 7899999999999999998733      1233556778889999988


Q ss_pred             ccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEEecCC
Q 042426          209 FLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE  270 (270)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  270 (270)
                      +...      .+.++++++++++|+++  +.++++|+++++++|++.+.++ ..||+|++++++
T Consensus       296 ~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~  352 (356)
T 1pl8_A          296 VFRY------CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPS  352 (356)
T ss_dssp             CCSC------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTT
T ss_pred             eccc------HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCC
Confidence            7653      23478899999999964  5677899999999999999988 889999998753

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.1e-40  Score=278.45  Aligned_cols=247  Identities=19%  Similarity=0.258  Sum_probs=211.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE   33 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~   33 (270)
                      +++|+|+++|++|++|++||+|++.                                                   |+|+
T Consensus        69 E~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~a  148 (374)
T 1cdo_A           69 EGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFS  148 (374)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSB
T ss_pred             cceEEEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccce
Confidence            5678888899999999999999752                                                   7899


Q ss_pred             eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGS  111 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~  111 (270)
                      ||+++++++ ++++ |++  +++ ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus       149 ey~~v~~~~-~~~~-P~~--~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~  223 (374)
T 1cdo_A          149 QYTVVNQIA-VAKI-DPS--APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAV  223 (374)
T ss_dssp             SEEEEEGGG-EEEC-CTT--CCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEE
T ss_pred             eEEEEchhh-eEEC-CCC--CCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE
Confidence            999999999 9999 999  565 488899999999999888899999999999996 9999999999999999 89999


Q ss_pred             eCCHHHHHHHHHHhCCCceeecCC--chhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEcccccccc
Q 042426          112 ARSKEKVDLLKHKFGFDDAFNYKE--EPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQYNI  187 (270)
Q Consensus       112 ~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~  187 (270)
                      ++++++++.++ ++|+++++|+++  . ++.+.+++.+++++|++||++|. ..++.++++++++ |+++.+|....   
T Consensus       224 ~~~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~---  298 (374)
T 1cdo_A          224 DLNPDKFEKAK-VFGATDFVNPNDHSE-PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL---  298 (374)
T ss_dssp             CSCGGGHHHHH-HTTCCEEECGGGCSS-CHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS---
T ss_pred             cCCHHHHHHHH-HhCCceEEeccccch-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCC---
Confidence            99999999998 999999998874  3 68888888777789999999997 5889999999999 99999987542   


Q ss_pred             cCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          188 EKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                        ....++...++.++ ++.++....+  ...+.++++++++.+|+++  +.++++|+++++++|++.+.+++. +|+||
T Consensus       299 --~~~~~~~~~~~~~~-~i~g~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi  372 (374)
T 1cdo_A          299 --HDVATRPIQLIAGR-TWKGSMFGGF--KGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVL  372 (374)
T ss_dssp             --SCEEECHHHHHTTC-EEEECSGGGC--CHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEE
T ss_pred             --CCcccCHHHHhcCC-eEEEEecCCC--CcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEE
Confidence              12234555666777 8888765432  1356789999999999987  467789999999999999988874 79998


Q ss_pred             Ee
Q 042426          266 AV  267 (270)
Q Consensus       266 ~~  267 (270)
                      ++
T Consensus       373 ~~  374 (374)
T 1cdo_A          373 SL  374 (374)
T ss_dssp             EC
T ss_pred             eC
Confidence            75

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=3.3e-40  Score=279.22  Aligned_cols=246  Identities=18%  Similarity=0.237  Sum_probs=210.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-------------------------------------------------------
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------------------------------   29 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------------------------------   29 (270)
                      +++|+|+++|++|++|++||||++.                                                       
T Consensus        68 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~  147 (376)
T 1e3i_A           68 ECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGV  147 (376)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTT
T ss_pred             cccEEEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCC
Confidence            4567778899999999999999752                                                       


Q ss_pred             ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-E
Q 042426           30 TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-Y  107 (270)
Q Consensus        30 g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~  107 (270)
                      |+|+||+++++++ ++++ |++  +++ ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +
T Consensus       148 G~~aey~~v~~~~-~~~i-P~~--l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~  222 (376)
T 1e3i_A          148 SSFSQYTVVSEAN-LARV-DDE--ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASR  222 (376)
T ss_dssp             CCSBSEEEEEGGG-EEEC-CTT--CCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSE
T ss_pred             ccceeEEEecccc-EEEC-CCC--CCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCe
Confidence            7899999999999 9999 999  665 488899999999999888899999999999996 9999999999999999 8


Q ss_pred             EEEEeCCHHHHHHHHHHhCCCceeecCC--chhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEcccc
Q 042426          108 VVGSARSKEKVDLLKHKFGFDDAFNYKE--EPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMIS  183 (270)
Q Consensus       108 v~~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~  183 (270)
                      |+++++++++++.++ ++|+++++|+++  . ++.+.+++.+++++|+||||+|. ..++.++++++++ |+++.+|...
T Consensus       223 Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~  300 (376)
T 1e3i_A          223 IIAIDINGEKFPKAK-ALGATDCLNPRELDK-PVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV  300 (376)
T ss_dssp             EEEECSCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS
T ss_pred             EEEEcCCHHHHHHHH-HhCCcEEEccccccc-hHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCC
Confidence            999999999999998 999999999874  4 78888888877789999999997 6889999999999 9999998732


Q ss_pred             cccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccc
Q 042426          184 QYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVG  261 (270)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~g  261 (270)
                            ....++...++.++ ++.++.....  ...+.++++++++.+|+++  +.++.+|+++++++|++.+.+++ .+
T Consensus       301 ------~~~~~~~~~~~~~~-~i~g~~~~~~--~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~  370 (376)
T 1e3i_A          301 ------DEMTIPTVDVILGR-SINGTFFGGW--KSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SI  370 (376)
T ss_dssp             ------SEEEEEHHHHHTTC-EEEECSGGGC--CHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CS
T ss_pred             ------CccccCHHHhhccC-eEEEEecCCC--CcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cc
Confidence                  12235556667777 8888765432  1357789999999999987  46778999999999999998877 57


Q ss_pred             eEEEEe
Q 042426          262 KQLVAV  267 (270)
Q Consensus       262 k~vv~~  267 (270)
                      |+||++
T Consensus       371 Kvvi~~  376 (376)
T 1e3i_A          371 RTILTF  376 (376)
T ss_dssp             EEEEEC
T ss_pred             eEEEeC
Confidence            999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=4e-40  Score=278.47  Aligned_cols=248  Identities=21%  Similarity=0.290  Sum_probs=211.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE   33 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~   33 (270)
                      +++|+|+++|++|++|++||+|++.                                                   |+|+
T Consensus        67 E~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~a  146 (373)
T 2fzw_A           67 LGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFS  146 (373)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSB
T ss_pred             cccEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccce
Confidence            4567778899999999999999752                                                   7899


Q ss_pred             eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGS  111 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~  111 (270)
                      ||+++++++ ++++ |++  +++ ++|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus       147 ey~~v~~~~-~~~i-P~~--l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~  221 (373)
T 2fzw_A          147 EYTVVADIS-VAKI-DPL--APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGV  221 (373)
T ss_dssp             SEEEEEGGG-EEEC-CTT--SCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEE
T ss_pred             eEEEEchhh-eEEC-CCC--CCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence            999999999 9999 999  665 488899999999999888899999999999996 9999999999999999 89999


Q ss_pred             eCCHHHHHHHHHHhCCCceeecCC--chhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEcccccccc
Q 042426          112 ARSKEKVDLLKHKFGFDDAFNYKE--EPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQYNI  187 (270)
Q Consensus       112 ~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~  187 (270)
                      ++++++++.++ ++|+++++|+++  . ++.+.+++.+++++|++|||+|. ..++.++++++++ |+++.+|....   
T Consensus       222 ~~~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~---  296 (373)
T 2fzw_A          222 DINKDKFARAK-EFGATECINPQDFSK-PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS---  296 (373)
T ss_dssp             CSCGGGHHHHH-HHTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT---
T ss_pred             cCCHHHHHHHH-HcCCceEeccccccc-cHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCC---
Confidence            99999999998 999999998874  3 68888888877789999999997 5889999999999 99999987542   


Q ss_pred             cCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          188 EKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                       .....++...++.++ ++.++....+  ...+.++++++++.+|+++  +.++++|+++++++|++.+.+++. +|+|+
T Consensus       297 -~~~~~~~~~~~~~~~-~i~g~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi  371 (373)
T 2fzw_A          297 -GEEIATRPFQLVTGR-TWKGTAFGGW--KSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVV  371 (373)
T ss_dssp             -TCCEEECTHHHHTTC-EEEECSGGGC--CHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEE
T ss_pred             -CceeeeCHHHHhcCC-EEEEeccCCC--CcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEE
Confidence             111234455666677 8888765432  1356789999999999987  467789999999999999988775 69998


Q ss_pred             Ee
Q 042426          266 AV  267 (270)
Q Consensus       266 ~~  267 (270)
                      ++
T Consensus       372 ~~  373 (373)
T 2fzw_A          372 KI  373 (373)
T ss_dssp             EC
T ss_pred             eC
Confidence            75

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=5.4e-40  Score=277.69  Aligned_cols=248  Identities=18%  Similarity=0.271  Sum_probs=211.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE   33 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~   33 (270)
                      +++|+|+++|++|++|++||||++.                                                   |+|+
T Consensus        68 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~a  147 (374)
T 2jhf_A           68 EAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFS  147 (374)
T ss_dssp             SEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSB
T ss_pred             CceEEEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCe
Confidence            5567788899999999999999742                                                   7899


Q ss_pred             eeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEE
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGS  111 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~  111 (270)
                      ||+++++++ ++++ |++  +++ ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus       148 ey~~v~~~~-~~~i-P~~--l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~  222 (374)
T 2jhf_A          148 QYTVVDEIS-VAKI-DAA--SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGV  222 (374)
T ss_dssp             SEEEEEGGG-EEEC-CTT--CCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEE
T ss_pred             eEEEEchHH-eEEC-CCC--CCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence            999999999 9999 999  665 488899999999999888899999999999996 9999999999999999 89999


Q ss_pred             eCCHHHHHHHHHHhCCCceeecCC--chhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccC-CEEEEEcccccccc
Q 042426          112 ARSKEKVDLLKHKFGFDDAFNYKE--EPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRIC-GHIAVCGMISQYNI  187 (270)
Q Consensus       112 ~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~  187 (270)
                      ++++++++.++ ++|+++++|+++  . ++.+.+.+.+++++|++|||+|. ..++.++++++++ |+++.+|....   
T Consensus       223 ~~~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~---  297 (374)
T 2jhf_A          223 DINKDKFAKAK-EVGATECVNPQDYKK-PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD---  297 (374)
T ss_dssp             CSCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT---
T ss_pred             cCCHHHHHHHH-HhCCceEecccccch-hHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCC---
Confidence            99999999998 999999998874  3 68888888877789999999997 5889999999999 99999987542   


Q ss_pred             cCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCceee--eeeeecCcccHHHHHHHHhcCCccceEEE
Q 042426          188 EKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVY--VEDIAEGLEKAPSALVGIFTGQNVGKQLV  265 (270)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  265 (270)
                       .....++...++.++ ++.++....+  ...+.++++++++.+|++++  .++++|+++++++|++.+.+++. +|+||
T Consensus       298 -~~~~~~~~~~~~~~~-~i~g~~~~~~--~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi  372 (374)
T 2jhf_A          298 -SQNLSMNPMLLLSGR-TWKGAIFGGF--KSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTIL  372 (374)
T ss_dssp             -TCCEEECTHHHHTTC-EEEECSGGGC--CHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEE
T ss_pred             -CCccccCHHHHhcCC-eEEEeccCCC--ChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEE
Confidence             112234455666777 8888765432  12567899999999999874  57789999999999999988774 79998


Q ss_pred             Ee
Q 042426          266 AV  267 (270)
Q Consensus       266 ~~  267 (270)
                      ++
T Consensus       373 ~~  374 (374)
T 2jhf_A          373 TF  374 (374)
T ss_dssp             EC
T ss_pred             eC
Confidence            75

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=8.2e-42  Score=283.65  Aligned_cols=250  Identities=19%  Similarity=0.220  Sum_probs=210.6

Q ss_pred             CCccc---ceEEEEeecCCCCCCCCCEEEe---------cccceeeEeecCCccceeccCCCCCccc-cccccCchhhhH
Q 042426            2 QPLSG---YGVSKVLDSTHPNYKKDDLVWG---------LTSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTA   68 (270)
Q Consensus         2 ~~i~g---~g~v~~vG~~v~~~~~Gd~V~~---------~g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta   68 (270)
                      |.++|   +|+|+++|  +++|++||+|++         .|+|+||+++++++ ++++ |++  +++ ++|+++..++||
T Consensus        58 p~v~G~E~~G~V~~~G--v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~--~~~~~aa~l~~~~~ta  131 (324)
T 3nx4_A           58 PMIPGIDFAGTVHASE--DPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDW-LVAL-PAG--LSSRNAMIIGTAGFTA  131 (324)
T ss_dssp             SBCCCSEEEEEEEEES--STTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGG-CEEC-CTT--CCHHHHHHHHHHHHHH
T ss_pred             CccccceeEEEEEEeC--CCCCCCCCEEEEcccccCCCCCCceeeEEecCHHH-cEEC-CCC--CCHHHHHHhhhHHHHH
Confidence            44555   55666666  689999999984         28999999999999 9999 999  665 489999999999


Q ss_pred             HHHhhhh--cCCCCCc-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHh
Q 042426           69 YGGLHEL--CSPKKGE-YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNR  145 (270)
Q Consensus        69 ~~~l~~~--~~~~~g~-~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~  145 (270)
                      |++++..  .++++++ +|||+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++|+++. +.   +++
T Consensus       132 ~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~---~~~  206 (324)
T 3nx4_A          132 MLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SLGANRILSRDEF-AE---SRP  206 (324)
T ss_dssp             HHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTCSEEEEGGGS-SC---CCS
T ss_pred             HHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEecCCH-HH---HHh
Confidence            9988643  5566633 4999999999999999999999999999999999999998 9999999998765 33   455


Q ss_pred             HcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHH
Q 042426          146 CFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLEL  224 (270)
Q Consensus       146 ~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  224 (270)
                      .+++++|++|||+|++.++.++++++++|+++.+|....     .....+...++.+++++.+++.... .....+.+++
T Consensus       207 ~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  281 (324)
T 3nx4_A          207 LEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGG-----FALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWAR  281 (324)
T ss_dssp             SCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTC-----SEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHH
T ss_pred             hcCCCccEEEECCCcHHHHHHHHHHhcCCEEEEEecCCC-----CCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHH
Confidence            555689999999999999999999999999999998542     2233556678889999999876543 2334577899


Q ss_pred             HHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426          225 VMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       225 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      +.+++++|++++. .++|+++++++|++.+.+++..||+|++++
T Consensus       282 ~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          282 LVKDLPESFYAQA-ATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             HHHHSCHHHHHHH-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             HHHHHHcCCCCCC-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            9999999999987 889999999999999999999999999874

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=2.2e-40  Score=277.45  Aligned_cols=243  Identities=20%  Similarity=0.196  Sum_probs=209.5

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|+++|++|++|++||+|++.                              |+|+||+++++++ ++++ |++  +
T Consensus        68 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~--~  143 (348)
T 2d8a_A           68 EVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQN-IWKN-PKS--I  143 (348)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGG-EEEC-CTT--S
T ss_pred             cceEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHH-eEEC-CCC--C
Confidence            4567788899999999999999863                              8999999999999 9999 999  6


Q ss_pred             ccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           55 PYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        55 ~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      +++ +|++ .++.|||+++ +.+++ +|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|+++++|
T Consensus       144 ~~~~aa~~-~~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga~~~~~  218 (348)
T 2d8a_A          144 PPEYATLQ-EPLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVIN  218 (348)
T ss_dssp             CHHHHTTH-HHHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTCSEEEC
T ss_pred             CHHHHHhh-hHHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEC
Confidence            665 5555 5888999999 67889 9999999999 9999999999999999 9999999999999998 999999999


Q ss_pred             cCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccch-HHHHhhcceeeec
Q 042426          133 YKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL-MQVVGKRICMEGF  209 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  209 (270)
                      +++. ++.+.+.+.+++ ++|++|||+|. ..++.++++++++|+++.+|....      ...++. ..++.+++++.|+
T Consensus       219 ~~~~-~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~i~g~  291 (348)
T 2d8a_A          219 PFEE-DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPG------KVTIDFNNLIIFKALTIYGI  291 (348)
T ss_dssp             TTTS-CHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CCCCCHHHHTTTTTCEEEEC
T ss_pred             CCCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC------CcccCchHHHHhCCcEEEEe
Confidence            9887 888999988877 89999999998 688999999999999999987542      123455 5677889999887


Q ss_pred             cccCcccchHHHHHHHHHHHHCCce--eeeeeeecC-cccHHHHHHHHhcCCccceEEEEec
Q 042426          210 LAGDFYHQYPKFLELVMLAIKEGKL--VYVEDIAEG-LEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~-~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      ....    ..+.++++.+++++|++  ++.++++|+ ++++++|++.+.+ ...||+|++++
T Consensus       292 ~~~~----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          292 TGRH----LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             CCCC----SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             cCCC----cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            6533    15678999999999995  567778999 9999999999977 56899999874

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=3.9e-40  Score=275.99  Aligned_cols=252  Identities=18%  Similarity=0.147  Sum_probs=209.0

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      |++|+|+++|++|++|++||+|++.                              |+|+||+++++++ ++++ |++  +
T Consensus        60 E~~G~V~~vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~--l  135 (346)
T 4a2c_A           60 EFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKN-VFAL-PTD--M  135 (346)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGG-EEEC-CTT--S
T ss_pred             EEEEEEEEECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchhe-EEEC-CCC--C
Confidence            4467778899999999999999642                              7899999999999 9999 999  6


Q ss_pred             cccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      +++.|++..++.+++.++ ...++++|++|+|+|+ |++|++++|+|+.+|+ .++++++++++++.++ ++|+++++|+
T Consensus       136 ~~~~aa~l~~~~~~~~~~-~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~-~lGa~~~i~~  212 (346)
T 4a2c_A          136 PIEDGAFIEPITVGLHAF-HLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNS  212 (346)
T ss_dssp             CGGGGGGHHHHHHHHHHH-HHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEET
T ss_pred             CHHHHHhchHHHHHHHHH-HHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH-HcCCeEEEeC
Confidence            665334444555555554 7789999999999997 9999999999999999 5677888999999999 9999999999


Q ss_pred             CCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426          134 KEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      ++. ++.+.++..+++ ++|+++|++|. ..++.++++++++|+++.+|.....   ......+...++.+++++.|++.
T Consensus       213 ~~~-~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~k~~~i~G~~~  288 (346)
T 4a2c_A          213 SEM-SAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQD---LHLTSATFGKILRKELTVIGSWM  288 (346)
T ss_dssp             TTS-CHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSC---EEECHHHHHHHHHHTCEEEECCT
T ss_pred             CCC-CHHHHHHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCC---ccccccCHHHHhhceeEEEEEec
Confidence            987 888888888777 89999999996 4889999999999999999875431   11123445667889999999876


Q ss_pred             cCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          212 GDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ........+.++++.+++++|+++  +.++++|+++++++|++.+.+++..||+||.+
T Consensus       289 ~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          289 NYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             TCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             cccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            554333457789999999999885  56888999999999999999999999999853

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.1e-40  Score=277.02  Aligned_cols=245  Identities=16%  Similarity=0.150  Sum_probs=209.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|+++|++|++|++||+|++                               .|+|+||+++++++ ++++ |++  
T Consensus        67 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~--  142 (352)
T 1e3j_A           67 EASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF-CHKL-PDN--  142 (352)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTT--
T ss_pred             cceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHH-eEEC-cCC--
Confidence            456778889999999999999985                               28999999999999 9999 999  


Q ss_pred             ccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           54 LPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      ++++.|++..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|+++++|+
T Consensus       143 ~~~~~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~  219 (352)
T 1e3j_A          143 VSLEEGALLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVV  219 (352)
T ss_dssp             SCHHHHHTHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEEC
T ss_pred             CCHHHHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcC
Confidence            6665444557889999999 6789999999999997 99999999999999999999999999999998 9999999998


Q ss_pred             CC-chhHHHHHHhHcC---C-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceee
Q 042426          134 KE-EPDLDAALNRCFP---E-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICME  207 (270)
Q Consensus       134 ~~-~~~~~~~i~~~~~---~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (270)
                      ++ . ++.+.+.+.++   + ++|++||++|.. .++.++++++++|+++.+|...      ....++...+..+++++.
T Consensus       220 ~~~~-~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~------~~~~~~~~~~~~~~~~i~  292 (352)
T 1e3j_A          220 DPAK-EEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS------QMVTVPLVNACAREIDIK  292 (352)
T ss_dssp             CTTT-SCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCS------SCCCCCHHHHHTTTCEEE
T ss_pred             cccc-cHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC------CCccccHHHHHhcCcEEE
Confidence            85 5 67777777664   4 899999999985 7899999999999999998733      122355677888899998


Q ss_pred             eccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCC-ccceEEEEecC
Q 042426          208 GFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQ-NVGKQLVAVAR  269 (270)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~~~  269 (270)
                      ++...      .+.++++++++.+|+++  +.++++|+++++++|++.+.+++ ..+|+|+++++
T Consensus       293 g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          293 SVFRY------CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             ECCSC------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             Eeccc------hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            87643      23478899999999864  56778999999999999999988 68999999864

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1.8e-40  Score=278.08  Aligned_cols=239  Identities=16%  Similarity=0.162  Sum_probs=205.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec----------------------------------------ccceeeEeecCCccc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL----------------------------------------TSWEEFSLIQSPQLL   44 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~----------------------------------------g~~~~~~~v~~~~~~   44 (270)
                      +++|+|+++|++|++|++||+|+..                                        |+|+||+++++++ +
T Consensus        65 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~-~  143 (348)
T 3two_A           65 EIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENY-V  143 (348)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGG-C
T ss_pred             ceeEEEEEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhh-E
Confidence            4567778899999999999999651                                        8999999999999 9


Q ss_pred             eeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 042426           45 IKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH  123 (270)
Q Consensus        45 ~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~  123 (270)
                      +++ |++  +++ ++|++++++.|||+++. ..++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ 
T Consensus       144 ~~i-P~~--~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-  217 (348)
T 3two_A          144 ISV-DKN--APLEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-  217 (348)
T ss_dssp             EEC-CTT--SCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-
T ss_pred             EEC-CCC--CCHHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-
Confidence            999 999  665 48899999999999995 468999999999997 99999999999999999999999999999998 


Q ss_pred             HhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHH-h
Q 042426          124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVV-G  201 (270)
Q Consensus       124 ~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~  201 (270)
                      ++|+++++  .+. +.   +.    .++|++|||+|+. .++.++++++++|+++.+|.....    +...++...++ .
T Consensus       218 ~lGa~~v~--~~~-~~---~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~  283 (348)
T 3two_A          218 SMGVKHFY--TDP-KQ---CK----EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVE----VAPVLSVFDFIHL  283 (348)
T ss_dssp             HTTCSEEE--SSG-GG---CC----SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGG----GCCEEEHHHHHHT
T ss_pred             hcCCCeec--CCH-HH---Hh----cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCC----CcccCCHHHHHhh
Confidence            89999887  332 21   11    1699999999997 999999999999999999875411    11125556666 8


Q ss_pred             hcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecCC
Q 042426          202 KRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE  270 (270)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  270 (270)
                      +++++.|+...+     .+.++++++++++|++++.+ .+|+++++++|++.+.+++..||+|++++++
T Consensus       284 ~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~  346 (348)
T 3two_A          284 GNRKVYGSLIGG-----IKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS  346 (348)
T ss_dssp             CSCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred             CCeEEEEEecCC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence            999999988765     46789999999999999876 6899999999999999999999999999764

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=3e-39  Score=269.12  Aligned_cols=260  Identities=40%  Similarity=0.649  Sum_probs=214.7

Q ss_pred             cccceEEEE-eecCCCCCCCCCEEEecccceeeEeecCCccceeccCCC----CCccccccccCchhhhHHHHhhhhcCC
Q 042426            4 LSGYGVSKV-LDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTS----VPLPYYTGILGMPGLTAYGGLHELCSP   78 (270)
Q Consensus         4 i~g~g~v~~-vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~p~~----~~~~~~~a~l~~~~~ta~~~l~~~~~~   78 (270)
                      +.|++.++. +.++|++|++||||++.|+|+||+++++++ ++++ |++    ++.+..+|+++++++|||+++.+.+++
T Consensus        66 ~~g~e~~G~Vv~~~v~~~~vGdrV~~~g~~aey~~v~~~~-~~~i-P~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~  143 (333)
T 1v3u_A           66 VMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKG-LEKL-LTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGV  143 (333)
T ss_dssp             BCCCCEEEEEEEESCTTSCTTCEEEECCCSBSEEEESSTT-EEEC-C--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCC
T ss_pred             ccccceEEEEEecCCCCCCCCCEEEecCceEEEEEechHH-eEEc-CcccccCCCHHHHHHHhCChHHHHHHHHHHhhCC
Confidence            444444433 346789999999999999999999999999 9999 886    333322589999999999999888899


Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCC-chhHHHHHHhHcCCCccEEEeC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKE-EPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      ++|++++|+|++|++|++++|+++..|++|+++++++++.+.++ ++|+++++|+++ . ++.+.+.+.+.+++|++||+
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~-~~~~~~~~~~~~~~d~vi~~  221 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVN-SLEEALKKASPDGYDCYFDN  221 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTSCS-CHHHHHHHHCTTCEEEEEES
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCcEEEecCCHH-HHHHHHHHHhCCCCeEEEEC
Confidence            99999999999999999999999999999999999999999996 999988899887 5 88888888776689999999


Q ss_pred             CCcchHHHHHHccccCCEEEEEcccccccccC-CCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHHHHHHCCcee
Q 042426          158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEK-PEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~  235 (270)
                      +|...+..++++++++|+++.+|......... +....+...++.+++++.|+....+ +....+.++++.+++.+|+++
T Consensus       222 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~  301 (333)
T 1v3u_A          222 VGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQ  301 (333)
T ss_dssp             SCHHHHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSC
T ss_pred             CChHHHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCcc
Confidence            99988999999999999999998754311000 1111255677889999999876543 234467889999999999999


Q ss_pred             eeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          236 YVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       236 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +.+..+++++++++|++.+.+++..||+|+++
T Consensus       302 ~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          302 YHEHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             CCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             CccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            88777789999999999999998899999974

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=2e-40  Score=278.20  Aligned_cols=248  Identities=17%  Similarity=0.143  Sum_probs=209.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe---------------------------------cccceeeEeecCC--ccceeccC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG---------------------------------LTSWEEFSLIQSP--QLLIKILD   49 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~~~p   49 (270)
                      +++|+|+++|++|++|++||+|++                                 .|+|+||++++++  + ++++ |
T Consensus        60 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~-~~~i-P  137 (352)
T 3fpc_A           60 EAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMN-LAHL-P  137 (352)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHH-CEEC-C
T ss_pred             cceEEEEEECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCe-EEEC-C
Confidence            456778889999999999999984                                 2899999999986  7 9999 9


Q ss_pred             CCCCcccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC
Q 042426           50 TSVPLPYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF  127 (270)
Q Consensus        50 ~~~~~~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~  127 (270)
                      ++  ++++ +|+++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|+
T Consensus       138 ~~--~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa  212 (352)
T 3fpc_A          138 KE--IPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL-EYGA  212 (352)
T ss_dssp             TT--SCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH-HHTC
T ss_pred             CC--CCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCC
Confidence            99  6654 788889999999999 6789999999999996 9999999999999999 8999999999999998 9999


Q ss_pred             CceeecCCchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccch--HHHHhhc
Q 042426          128 DDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL--MQVVGKR  203 (270)
Q Consensus       128 ~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~  203 (270)
                      ++++|+++. ++.+.+.+.+++ ++|++|||+|+ ..++.++++++++|+++.+|.....    .....+.  .....++
T Consensus       213 ~~vi~~~~~-~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~~~~~~  287 (352)
T 3fpc_A          213 TDIINYKNG-DIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEG----DNIDIPRSEWGVGMGH  287 (352)
T ss_dssp             CEEECGGGS-CHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSC----SEEEEETTTTGGGTBC
T ss_pred             ceEEcCCCc-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCC----CceecchhHhhhhccc
Confidence            999999887 899999999988 99999999998 5899999999999999999875421    1111111  1122456


Q ss_pred             ceeeeccccCcccchHHHHHHHHHHHHCCceeee--eeeecC-cccHHHHHHHHhcCC-ccceEEEEec
Q 042426          204 ICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYV--EDIAEG-LEKAPSALVGIFTGQ-NVGKQLVAVA  268 (270)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~-~~~~~~a~~~~~~~~-~~gk~vv~~~  268 (270)
                      .++.++....    ..+.++++++++.+|++++.  ++++|+ ++++++|++.+.+++ ..+|+|++++
T Consensus       288 ~~i~g~~~~~----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          288 KHIHGGLCPG----GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             EEEEEBCCCC----HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             cEEEEeeccC----chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            7777765422    25678999999999999874  778898 999999999999866 4589999874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8e-40  Score=274.00  Aligned_cols=247  Identities=20%  Similarity=0.262  Sum_probs=213.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|+++|++|++|++||+|++                               .|+|+||+++++++ ++++ |++  
T Consensus        67 E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~--  142 (347)
T 2hcy_A           67 EGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQ-AAHI-PQG--  142 (347)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTT-SEEE-CTT--
T ss_pred             cceEEEEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEecccc-EEEC-CCC--
Confidence            456778889999999999999974                               27899999999999 9999 999  


Q ss_pred             ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      +++ ++|+++++++|||+++.+ .++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|+++++|
T Consensus       143 ~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~g~~~~~d  220 (347)
T 2hcy_A          143 TDLAQVAPILCAGITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SIGGEVFID  220 (347)
T ss_dssp             CCHHHHGGGGTHHHHHHHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HTTCCEEEE
T ss_pred             CCHHHHHHHhhhHHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-HcCCceEEe
Confidence            665 488999999999999965 58999999999999999999999999999999999999999999888 899988889


Q ss_pred             cCCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccc
Q 042426          133 YKEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       133 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      +++..++.+.+.+.+.+++|++||++|. ..++.++++++++|+++.+|....     .....+...++.+++++.|+..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~i~g~~~  295 (347)
T 2hcy_A          221 FTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAG-----AKCCSDVFNQVVKSISIVGSYV  295 (347)
T ss_dssp             TTTCSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTT-----CEEEEEHHHHHHTTCEEEECCC
T ss_pred             cCccHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCC-----CCCCCCHHHHhhCCcEEEEccC
Confidence            8732278888887765589999999997 688999999999999999987542     1223556677889999998766


Q ss_pred             cCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426          212 GDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      ..     .+.++++++++++|++++.+ ++|+++++++|++.+.+++..||+|++++
T Consensus       296 ~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          296 GN-----RADTREALDFFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             CC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             CC-----HHHHHHHHHHHHhCCCccce-EEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence            44     46789999999999999864 68999999999999999888899999876

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.6e-40  Score=277.81  Aligned_cols=243  Identities=19%  Similarity=0.223  Sum_probs=206.7

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe---------------------------------------cccceeeEeecCCccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG---------------------------------------LTSWEEFSLIQSPQLLI   45 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~---------------------------------------~g~~~~~~~v~~~~~~~   45 (270)
                      +++|+|+++|++|++|++||+|++                                       .|+|+||+++++++ ++
T Consensus        83 E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~-~~  161 (369)
T 1uuf_A           83 EIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERY-VL  161 (369)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGG-CE
T ss_pred             CceEEEEEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchh-EE
Confidence            456778889999999999999973                                       18899999999999 99


Q ss_pred             eccCCC-CCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 042426           46 KILDTS-VPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK  124 (270)
Q Consensus        46 ~~~p~~-~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~  124 (270)
                      ++ |++ ++.. ++|+++++++|||+++.+ .++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ +
T Consensus       162 ~~-P~~~ls~~-~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~  236 (369)
T 1uuf_A          162 RI-RHPQEQLA-AVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-A  236 (369)
T ss_dssp             EC-CSCGGGHH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-H
T ss_pred             EC-CCCCCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H
Confidence            99 887 6555 588999999999999965 68999999999997 99999999999999999999999999999998 8


Q ss_pred             hCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhc
Q 042426          125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKR  203 (270)
Q Consensus       125 ~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  203 (270)
                      +|+++++|+++. ++.+.+.    +++|++|||+|.+ .++.++++++++|+++.+|....     +...++...++.++
T Consensus       237 lGa~~vi~~~~~-~~~~~~~----~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~  306 (369)
T 1uuf_A          237 LGADEVVNSRNA-DEMAAHL----KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT-----PHKSPEVFNLIMKR  306 (369)
T ss_dssp             HTCSEEEETTCH-HHHHTTT----TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTT
T ss_pred             cCCcEEeccccH-HHHHHhh----cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCC-----CccccCHHHHHhCC
Confidence            999999998875 5443332    4799999999986 78999999999999999987542     11135566778899


Q ss_pred             ceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          204 ICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      +++.++...+     .+.++++++++++|++++.+. +|+++++++|++.+.+++..||+|+++++
T Consensus       307 ~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          307 RAIAGSMIGG-----IPETQEMLDFCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             CEEEECCSCC-----HHHHHHHHHHHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             cEEEEeecCC-----HHHHHHHHHHHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            9999887654     467899999999999998764 69999999999999998888999998864

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=2.4e-40  Score=278.85  Aligned_cols=244  Identities=15%  Similarity=0.119  Sum_probs=207.0

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-------------------------------cccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-------------------------------LTSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|+++|++|++|++||+|++                               .|+|+||+++++++ ++++ |+ ++
T Consensus        79 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~-~s  155 (363)
T 3m6i_A           79 ESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVW-CHKI-GN-MS  155 (363)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGG-EEEC-TT-CC
T ss_pred             ceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhh-EEEC-CC-CC
Confidence            456778889999999999999985                               28999999999999 9999 87 44


Q ss_pred             ccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceee
Q 042426           54 LPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFN  132 (270)
Q Consensus        54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~  132 (270)
                      .. ++|++ .++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++ |+++++++++++.++ ++ ++++++
T Consensus       156 ~~-~aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~~~~~~  229 (363)
T 3m6i_A          156 YE-NGAML-EPLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-CPEVVT  229 (363)
T ss_dssp             HH-HHHHH-HHHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-CTTCEE
T ss_pred             HH-HHHhh-hHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-chhccc
Confidence            33 45555 6889999999 7789999999999998 99999999999999996 999999999999999 78 666666


Q ss_pred             cC----CchhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhccee
Q 042426          133 YK----EEPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICM  206 (270)
Q Consensus       133 ~~----~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (270)
                      +.    +..++.+.+++.+++ ++|++|||+|++ .++.++++++++|+++.+|....      ...++...++.+++++
T Consensus       230 ~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i  303 (363)
T 3m6i_A          230 HKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKN------EIQIPFMRASVREVDL  303 (363)
T ss_dssp             EECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCS------CCCCCHHHHHHHTCEE
T ss_pred             ccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCC------CccccHHHHHhcCcEE
Confidence            54    223788899999877 999999999986 78999999999999999987542      2235667788899999


Q ss_pred             eeccccCcccchHHHHHHHHHHHHCCce--eeeeeeecCcccHHHHHHHHhcC-CccceEEEEecC
Q 042426          207 EGFLAGDFYHQYPKFLELVMLAIKEGKL--VYVEDIAEGLEKAPSALVGIFTG-QNVGKQLVAVAR  269 (270)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~~~~  269 (270)
                      .++...      .+.++++++++++|++  ++.++++|+++++++|++.+.++ ...+|+|++.++
T Consensus       304 ~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          304 QFQYRY------CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             EECCSC------SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             EEccCC------HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence            888654      3457889999999998  55678899999999999999998 578899999864

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.9e-40  Score=278.84  Aligned_cols=244  Identities=18%  Similarity=0.189  Sum_probs=213.5

Q ss_pred             ccceEEEEeecCCC------CCCCCCEEEe---------------------------------------cccceeeEee-
Q 042426            5 SGYGVSKVLDSTHP------NYKKDDLVWG---------------------------------------LTSWEEFSLI-   38 (270)
Q Consensus         5 ~g~g~v~~vG~~v~------~~~~Gd~V~~---------------------------------------~g~~~~~~~v-   38 (270)
                      +++|+|+++| +|+      +|++||+|++                                       .|+|+||+++ 
T Consensus        78 E~~G~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~  156 (380)
T 1vj0_A           78 EGAGRVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLD  156 (380)
T ss_dssp             EEEEEEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEEC
T ss_pred             CcEEEEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEc
Confidence            4567778899 999      9999999985                                       2889999999 


Q ss_pred             cCCccceeccCCCCCcccc-ccccCchhhhHHHHhhhhcC-CCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCH
Q 042426           39 QSPQLLIKILDTSVPLPYY-TGILGMPGLTAYGGLHELCS-PKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSK  115 (270)
Q Consensus        39 ~~~~~~~~~~p~~~~~~~~-~a~l~~~~~ta~~~l~~~~~-~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~  115 (270)
                      ++++ ++++ |++  ++++ .|++..+++|||+++ +.++ +++|++|||+| +|++|++++|+|+.+| ++|+++++++
T Consensus       157 ~~~~-~~~i-P~~--l~~~~~Aa~~~~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~  230 (380)
T 1vj0_A          157 PETD-VLKV-SEK--DDLDVLAMAMCSGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSP  230 (380)
T ss_dssp             TTCC-EEEE-CTT--SCHHHHHHHTTHHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCH
T ss_pred             ccce-EEEC-CCC--CChHHhHhhhcHHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCH
Confidence            9999 9999 999  6665 677777999999999 5678 99999999999 6999999999999999 4999999999


Q ss_pred             HHHHHHHHHhCCCceeecC---CchhHHHHHHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEEcccc-cccccC
Q 042426          116 EKVDLLKHKFGFDDAFNYK---EEPDLDAALNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMIS-QYNIEK  189 (270)
Q Consensus       116 ~~~~~~~~~~g~~~vi~~~---~~~~~~~~i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~  189 (270)
                      ++++.++ ++|++++++++   +. ++.+.+++.+++ ++|++|||+|. ..++.++++++++|+++.+|... ..    
T Consensus       231 ~~~~~~~-~lGa~~vi~~~~~~~~-~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~----  304 (380)
T 1vj0_A          231 NRLKLAE-EIGADLTLNRRETSVE-ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQD----  304 (380)
T ss_dssp             HHHHHHH-HTTCSEEEETTTSCHH-HHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCC----
T ss_pred             HHHHHHH-HcCCcEEEeccccCcc-hHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCC----
Confidence            9999998 99999999987   55 888899998887 89999999997 58999999999999999998754 20    


Q ss_pred             CCCccchHH-HHhhcceeeeccccCcccchHHHHHHHHHHHHC--CceeeeeeeecCcccHHHHHHHHhcCCccceEEEE
Q 042426          190 PEGVHNLMQ-VVGKRICMEGFLAGDFYHQYPKFLELVMLAIKE--GKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA  266 (270)
Q Consensus       190 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  266 (270)
                       ...++... ++.+++++.++...+     .+.++++++++++  |++++.++.+|+++++++|++.+.+++.. |+|++
T Consensus       305 -~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~  377 (380)
T 1vj0_A          305 -PVPFKVYEWLVLKNATFKGIWVSD-----TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILY  377 (380)
T ss_dssp             -CEEECHHHHTTTTTCEEEECCCCC-----HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEE
T ss_pred             -CeeEchHHHHHhCCeEEEEeecCC-----HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEE
Confidence             12345555 678899999987654     5789999999999  99988888999999999999999998878 99998


Q ss_pred             ec
Q 042426          267 VA  268 (270)
Q Consensus       267 ~~  268 (270)
                      ++
T Consensus       378 ~~  379 (380)
T 1vj0_A          378 PE  379 (380)
T ss_dssp             CC
T ss_pred             eC
Confidence            75

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=1.4e-40  Score=278.17  Aligned_cols=244  Identities=17%  Similarity=0.165  Sum_probs=209.0

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|+++|++|++|++||+|++.                              |+|+||+++++++ ++++ |++  +
T Consensus        64 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~--~  139 (343)
T 2dq4_A           64 EFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAEN-AWVN-PKD--L  139 (343)
T ss_dssp             EEEEEEEEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-EEEE-CTT--S
T ss_pred             cceEEEEEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHH-eEEC-CCC--C
Confidence            4567788899999999999999861                              8999999999999 9999 999  6


Q ss_pred             cccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      +++.|++..++.|||+++.+.+++ +|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++ +++++|+
T Consensus       140 ~~~~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l-a~~v~~~  215 (343)
T 2dq4_A          140 PFEVAAILEPFGNAVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY-ADRLVNP  215 (343)
T ss_dssp             CHHHHTTHHHHHHHHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT-CSEEECT
T ss_pred             CHHHHHhhhHHHHHHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-HHhccCc
Confidence            665334446788999999657889 9999999999 9999999999999999 9999999999999998 78 8899999


Q ss_pred             CCchhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccch-HHHHhhcceeeeccc
Q 042426          134 KEEPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL-MQVVGKRICMEGFLA  211 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  211 (270)
                      ++. ++.+.+++.+++++|++||++|+ ..++.++++++++|+++.+|....      ...++. ..++.+++++.|+..
T Consensus       216 ~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~i~g~~~  288 (343)
T 2dq4_A          216 LEE-DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD------PIRFDLAGELVMRGITAFGIAG  288 (343)
T ss_dssp             TTS-CHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CEEECHHHHTGGGTCEEEECCS
T ss_pred             Ccc-CHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CceeCcHHHHHhCceEEEEeec
Confidence            886 88888888773389999999998 688999999999999999987431      123555 567788999998765


Q ss_pred             cCcccchHHHHHHHHHHHHCCc--eeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426          212 GDFYHQYPKFLELVMLAIKEGK--LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      ..    ..+.++++++++++|+  +++.++++|+++++++|++.+.+++. ||+|++++
T Consensus       289 ~~----~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          289 RR----LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             CC----TTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             CC----CHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            41    2467899999999999  46777889999999999999998877 99999875

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.6e-39  Score=272.12  Aligned_cols=244  Identities=20%  Similarity=0.241  Sum_probs=213.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecC-CccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQS-PQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~-~~~~~~~~p~~~~   53 (270)
                      +++|+|+++|++|++|++||+|+++                              |+|+||+++++ ++ ++++  ++  
T Consensus        69 e~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~-~~~i--~~--  143 (347)
T 1jvb_A           69 EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKY-MYKL--RR--  143 (347)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGG-EEEC--SS--
T ss_pred             cceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccc-eEEe--CC--
Confidence            4567788899999999999999752                              78999999999 99 9988  45  


Q ss_pred             ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCcee
Q 042426           54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDDAF  131 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~vi  131 (270)
                      +++ ++|++++++.|||+++. .+++++|++|||+|++|++|++++|+++.. |++|+++++++++.+.++ ++|+++++
T Consensus       144 ~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~  221 (347)
T 1jvb_A          144 LNAVEAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVI  221 (347)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEE
T ss_pred             CCHHHcccchhhHHHHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCEEe
Confidence            555 48899999999999995 588999999999999789999999999999 999999999999999998 89999999


Q ss_pred             ecCCchhHHHHHHhHcC-CCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426          132 NYKEEPDLDAALNRCFP-EGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF  209 (270)
Q Consensus       132 ~~~~~~~~~~~i~~~~~-~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (270)
                      |+++. ++.+.+.+.+. +++|++||++|+. .++.++++++++|+++.+|....     .. .++...++.+++++.++
T Consensus       222 ~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~-~~~~~~~~~~~~~i~g~  294 (347)
T 1jvb_A          222 NASMQ-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA-----DL-HYHAPLITLSEIQFVGS  294 (347)
T ss_dssp             ETTTS-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC-----CC-CCCHHHHHHHTCEEEEC
T ss_pred             cCCCc-cHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCC-----CC-CCCHHHHHhCceEEEEE
Confidence            98886 78788888776 5899999999986 88999999999999999987541     11 45566778899999987


Q ss_pred             cccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          210 LAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      ....     .+.++++++++.+|++++.++++|+++++++|++.+.+++..||+|+++
T Consensus       295 ~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          295 LVGN-----QSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             CSCC-----HHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             eccC-----HHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            7644     5778999999999999999889999999999999999998889999974

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1.2e-41  Score=281.49  Aligned_cols=236  Identities=19%  Similarity=0.196  Sum_probs=186.5

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCcccc-ccccCchhhhHHHHhhhhcC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPYY-TGILGMPGLTAYGGLHELCS   77 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~~-~a~l~~~~~ta~~~l~~~~~   77 (270)
                      +++|+|+++|++|++|++||+|++.      |+|+||+++++++ ++++ |++  ++++ +|+++++++|||+++ +.++
T Consensus        65 e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~--~~~~~aa~l~~~~~ta~~al-~~~~  139 (315)
T 3goh_A           65 DGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDR-VMTL-PDN--LSFERAAALPCPLLTAWQAF-EKIP  139 (315)
T ss_dssp             EEEEEEEEECTTSCGGGTTCEEEEECCTTSCCSSBSEEEEETTS-EEEC-CTT--SCHHHHHTSHHHHHHHHHHH-TTSC
T ss_pred             eeEEEEEEeCCCCCCCCCCCEEEEeCCCCCCcccccEEEEcHHH-hccC-cCC--CCHHHHhhCccHHHHHHHHH-hhcC
Confidence            4566777899999999999999984      8999999999999 9999 999  6664 788999999999999 8899


Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      +++|++|||+|+ |++|++++|+|+.+|++|++++ ++++.+.++ ++|++++++     + .+.+    ++++|++|||
T Consensus       140 ~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~-----d-~~~v----~~g~Dvv~d~  206 (315)
T 3goh_A          140 LTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KRGVRHLYR-----E-PSQV----TQKYFAIFDA  206 (315)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HHTEEEEES-----S-GGGC----CSCEEEEECC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-HcCCCEEEc-----C-HHHh----CCCccEEEEC
Confidence            999999999999 9999999999999999999999 899999998 999998874     2 1222    4489999999


Q ss_pred             CCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----c---cchHHHHHHHHHHH
Q 042426          158 VGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----Y---HQYPKFLELVMLAI  229 (270)
Q Consensus       158 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~  229 (270)
                      +|++.+..++++++++|+++.+|.....    .     ....+.+++.+....+...     +   ....+.++++.+++
T Consensus       207 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  277 (315)
T 3goh_A          207 VNSQNAAALVPSLKANGHIICIQDRIPA----P-----IDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLI  277 (315)
T ss_dssp             -------TTGGGEEEEEEEEEECCC-------------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHhcCCCEEEEEeCCCCc----c-----ccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHH
Confidence            9998888999999999999999763311    1     1112233344433333211     1   13345688999999


Q ss_pred             HCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          230 KEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       230 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      ++|++++.++++|+++++++|++.+.  +..||+|+++++
T Consensus       278 ~~g~l~~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~  315 (315)
T 3goh_A          278 AQGKMEIAAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE  315 (315)
T ss_dssp             HTTSSCCCCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred             HCCCcccccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence            99999999999999999999999998  778999999864

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=3.3e-40  Score=281.42  Aligned_cols=245  Identities=16%  Similarity=0.169  Sum_probs=210.9

Q ss_pred             ccceEEEEeecCC------CCCCCCCEEEe------------------------------cccceeeEeecCCccceecc
Q 042426            5 SGYGVSKVLDSTH------PNYKKDDLVWG------------------------------LTSWEEFSLIQSPQLLIKIL   48 (270)
Q Consensus         5 ~g~g~v~~vG~~v------~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~~   48 (270)
                      +++|+|+++|++|      ++|++||+|++                              .|+|+||+++++++ ++++ 
T Consensus        98 E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-  175 (404)
T 3ip1_A           98 EFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKY-AWSL-  175 (404)
T ss_dssp             EEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-EEEC-
T ss_pred             cceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHH-eEec-
Confidence            4567788899999      89999999986                              28999999999999 9999 


Q ss_pred             CCCCCc-----cccccccCchhhhHHHHhhhh-cCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Q 042426           49 DTSVPL-----PYYTGILGMPGLTAYGGLHEL-CSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLL  121 (270)
Q Consensus        49 p~~~~~-----~~~~a~l~~~~~ta~~~l~~~-~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~  121 (270)
                      |++++.     ..++|+++.+++|||+++... +++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.+
T Consensus       176 P~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~  254 (404)
T 3ip1_A          176 RELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA  254 (404)
T ss_dssp             GGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH
T ss_pred             cccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            987432     224899999999999999655 48999999999998 9999999999999999 999999999999999


Q ss_pred             HHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc--hHHHHHHcc----ccCCEEEEEcccccccccCCCCcc
Q 042426          122 KHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK--MLDAVLLNM----RICGHIAVCGMISQYNIEKPEGVH  194 (270)
Q Consensus       122 ~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~--~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~  194 (270)
                      + ++|+++++|+++. ++.+.+++.+++ ++|++|||+|++  .+..+++++    +++|+++.+|....      ...+
T Consensus       255 ~-~lGa~~vi~~~~~-~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~------~~~~  326 (404)
T 3ip1_A          255 K-ELGADHVIDPTKE-NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADA------KIPL  326 (404)
T ss_dssp             H-HHTCSEEECTTTS-CHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCS------CEEE
T ss_pred             H-HcCCCEEEcCCCC-CHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCC------CCcc
Confidence            8 9999999999887 899999999988 999999999987  667777777    99999999998552      2346


Q ss_pred             chHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--eeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          195 NLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--YVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      +...++.+++++.|+.....    .+.++++++++++| ++  +.++.+|+++++++|++.+.    .||+|+++++
T Consensus       327 ~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~~~  394 (404)
T 3ip1_A          327 TGEVFQVRRAQIVGSQGHSG----HGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKVTM  394 (404)
T ss_dssp             CHHHHHHTTCEEEECCCCCS----TTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCEEE
T ss_pred             cHHHHhccceEEEEecCCCc----hHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEecCC
Confidence            77788889999998875332    35688999999999 65  46778999999999999987    5788887754

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.8e-39  Score=272.66  Aligned_cols=242  Identities=18%  Similarity=0.193  Sum_probs=205.8

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe--------------------------------------cccceeeEeecCCcccee
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG--------------------------------------LTSWEEFSLIQSPQLLIK   46 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~   46 (270)
                      +++|+|+++|++|++|++||+|+.                                      .|+|+||+++++++ +++
T Consensus        70 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~  148 (357)
T 2cf5_A           70 EVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKF-VVK  148 (357)
T ss_dssp             EEEEEEEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGG-EEE
T ss_pred             ceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhh-EEE
Confidence            456777889999999999999963                                      28899999999999 999


Q ss_pred             ccCCCCCccc-cccccCchhhhHHHHhhhhcCCC-CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 042426           47 ILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPK-KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK  124 (270)
Q Consensus        47 ~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~-~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~  124 (270)
                      + |++  +++ ++|++++++.|||+++.+ .+++ +|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++++
T Consensus       149 ~-P~~--ls~~~aa~l~~~~~ta~~~l~~-~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~  223 (357)
T 2cf5_A          149 I-PEG--MAVEQAAPLLCAGVTVYSPLSH-FGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD  223 (357)
T ss_dssp             C-CSS--CCHHHHTGGGTHHHHHHHHHHH-TSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT
T ss_pred             C-cCC--CCHHHhhhhhhhHHHHHHHHHh-cCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Confidence            9 999  665 488999999999999964 6788 9999999996 9999999999999999999999999998888768


Q ss_pred             hCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhc
Q 042426          125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKR  203 (270)
Q Consensus       125 ~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  203 (270)
                      +|+++++++++. +   .+.+.+ +++|++|||+|.. .++.++++++++|+++.+|....     +....+.. ++.++
T Consensus       224 lGa~~vi~~~~~-~---~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~-~~~~~  292 (357)
T 2cf5_A          224 LGADDYVIGSDQ-A---KMSELA-DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINN-----PLQFLTPL-LMLGR  292 (357)
T ss_dssp             SCCSCEEETTCH-H---HHHHST-TTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSS-----CCCCCHHH-HHHHT
T ss_pred             cCCceeeccccH-H---HHHHhc-CCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCC-----CccccCHH-HHhCc
Confidence            999999998764 3   344443 3799999999975 78999999999999999987542     11114444 77889


Q ss_pred             ceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          204 ICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      +++.++....     .+.++++++++.+|++++.+ ++||++++++|++.+.+++..||+|+++++
T Consensus       293 ~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  352 (357)
T 2cf5_A          293 KVITGSFIGS-----MKETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG  352 (357)
T ss_dssp             CEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred             cEEEEEccCC-----HHHHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence            9999887644     46789999999999999876 689999999999999999889999999864

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=2.4e-40  Score=278.37  Aligned_cols=242  Identities=17%  Similarity=0.136  Sum_probs=207.0

Q ss_pred             ccceEEEEeecCCC-CCCCCCEEE-----------------------------------e---cccceeeEeecCCccce
Q 042426            5 SGYGVSKVLDSTHP-NYKKDDLVW-----------------------------------G---LTSWEEFSLIQSPQLLI   45 (270)
Q Consensus         5 ~g~g~v~~vG~~v~-~~~~Gd~V~-----------------------------------~---~g~~~~~~~v~~~~~~~   45 (270)
                      +++|+|+++|++|+ +|++||+|+                                   +   .|+|+||+++++++ ++
T Consensus        69 E~~G~V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~  147 (360)
T 1piw_A           69 EIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHF-VV  147 (360)
T ss_dssp             CEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGG-EE
T ss_pred             CceEEEEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhh-eE
Confidence            56778888999999 999999993                                   2   18899999999999 99


Q ss_pred             eccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 042426           46 KILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK  124 (270)
Q Consensus        46 ~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~  124 (270)
                      ++ |++  +++ ++|++++++.|||+++.+ +++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ +
T Consensus       148 ~i-P~~--~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~  221 (360)
T 1piw_A          148 PI-PEN--IPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-K  221 (360)
T ss_dssp             EC-CTT--SCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-H
T ss_pred             EC-CCC--CCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-H
Confidence            99 999  665 488999999999999965 88999999999999 99999999999999999999999999999998 8


Q ss_pred             hCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc---chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHh
Q 042426          125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG---KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVG  201 (270)
Q Consensus       125 ~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  201 (270)
                      +|+++++|+++..++.+.+.    +++|++||++|.   ..++.++++++++|+++.+|....      ...++...++.
T Consensus       222 lGa~~v~~~~~~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~  291 (360)
T 1piw_A          222 MGADHYIATLEEGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYGL  291 (360)
T ss_dssp             HTCSEEEEGGGTSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGGC
T ss_pred             cCCCEEEcCcCchHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC------ccccCHHHHHh
Confidence            99999998864213444333    479999999998   688899999999999999987542      11234445667


Q ss_pred             hcceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCccc--HHHHHHHHhcCCccceEEEEecC
Q 042426          202 KRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEK--APSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      +++++.++...+     .+.++++++++.+|++++.+ ++|++++  +++|++.+.+++..||+|+++++
T Consensus       292 ~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~  355 (360)
T 1piw_A          292 KAVSISYSALGS-----IKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD  355 (360)
T ss_dssp             BSCEEEECCCCC-----HHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred             CCeEEEEEecCC-----HHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence            889998876644     57789999999999999988 8999999  99999999999888999999865

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=4.4e-40  Score=278.22  Aligned_cols=254  Identities=22%  Similarity=0.290  Sum_probs=202.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS   77 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~   77 (270)
                      +++|+|+++|++|++|++||+|++.      |+|+||+++++++ ++++ |++  +++ ++|+++.+++|||+++.+.++
T Consensus       101 E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~--ls~~~Aa~l~~~~~tA~~al~~~~~  176 (375)
T 2vn8_A          101 DVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNE-VSHK-PKS--LTHTQAASLPYVALTAWSAINKVGG  176 (375)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGG-EEEC-CTT--SCHHHHTTSHHHHHHHHHHHTTTTC
T ss_pred             eeeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHH-eeeC-CCC--CCHHHHhhhHHHHHHHHHHHHHhcc
Confidence            4567788899999999999999983      8999999999999 9999 999  665 488889899999999987788


Q ss_pred             ----CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           78 ----PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        78 ----~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                          +++|++|||+||+|++|++++|+|+..|++|++++ ++++.+.++ ++|+++++|+++. ++.+.+.+.  +++|+
T Consensus       177 ~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~~~~~-~~~~~~~~~--~g~D~  251 (375)
T 2vn8_A          177 LNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR-KLGADDVIDYKSG-SVEEQLKSL--KPFDF  251 (375)
T ss_dssp             CCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTSS-CHHHHHHTS--CCBSE
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHH-HcCCCEEEECCch-HHHHHHhhc--CCCCE
Confidence                99999999999999999999999999999999998 678889997 9999999999887 787777653  37999


Q ss_pred             EEeCCCcc--hHHHHHHccccCCEEEEEcccccccccCCCCccc----hHHHHhhcc-ee-eeccccC-cccchHHHHHH
Q 042426          154 YFENVGGK--MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHN----LMQVVGKRI-CM-EGFLAGD-FYHQYPKFLEL  224 (270)
Q Consensus       154 v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~  224 (270)
                      +|||+|+.  .+..++++++++|+++.+|...............    ...++.+++ ++ .+..+.. +.....+.+++
T Consensus       252 vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  331 (375)
T 2vn8_A          252 ILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDD  331 (375)
T ss_dssp             EEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHH
T ss_pred             EEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEeCCCHHHHHH
Confidence            99999987  4488899999999999998744210000000000    012223332 11 2222110 11123577899


Q ss_pred             HHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          225 VMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       225 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +.+++++|++++.++++|+++++++|++.+.+++..||+|+++
T Consensus       332 ~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          332 IAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            9999999999999989999999999999999998889999975

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=2.8e-39  Score=270.39  Aligned_cols=238  Identities=22%  Similarity=0.218  Sum_probs=189.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeec-CCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQ-SPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~-~~~~~~~~~p~~~~   53 (270)
                      +++|+|+++|++ ++|++||+|+++                              |+|+||++++ +++ ++++  ++  
T Consensus        66 E~~G~V~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~-~~~i--~~--  139 (344)
T 2h6e_A           66 ENAGTIVEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRW-LVKL--NS--  139 (344)
T ss_dssp             CEEEEEEEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGG-EEEE--SS--
T ss_pred             cceEEEEEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCccc-EEEe--CC--
Confidence            567778889999 999999999752                              8899999999 999 9988  56  


Q ss_pred             ccc-cccccCchhhhHHHHhhhh----cCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhC
Q 042426           54 LPY-YTGILGMPGLTAYGGLHEL----CSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKFG  126 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~----~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~g  126 (270)
                      +++ ++|++++++.|||+++...    +++ +|++|||+|+ |++|++++|+|+.+  |++|+++++++++++.++ ++|
T Consensus       140 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lG  216 (344)
T 2h6e_A          140 LSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELG  216 (344)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHT
T ss_pred             CCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhC
Confidence            555 4889999999999999765    388 9999999999 99999999999999  999999999999999998 899


Q ss_pred             CCceeecCC-chhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhc
Q 042426          127 FDDAFNYKE-EPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKR  203 (270)
Q Consensus       127 ~~~vi~~~~-~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  203 (270)
                      +++++|+++ . ++.+   +.+.+ ++|++|||+|++ .++.++++++++|+++.+|....      ...++...++.++
T Consensus       217 a~~vi~~~~~~-~~~~---~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~  286 (344)
T 2h6e_A          217 ADYVSEMKDAE-SLIN---KLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGK------RVSLEAFDTAVWN  286 (344)
T ss_dssp             CSEEECHHHHH-HHHH---HHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------CCCCCHHHHHHTT
T ss_pred             CCEEeccccch-HHHH---HhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCC------CcccCHHHHhhCC
Confidence            999998765 4 4433   34445 899999999987 89999999999999999987542      1235566778899


Q ss_pred             ceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          204 ICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +++.++...+     .+.++++++++.+|++++.+ ++|+++++++|++.+.+++..||+|+++
T Consensus       287 ~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          287 KKLLGSNYGS-----LNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             CEEEECCSCC-----HHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             cEEEEEecCC-----HHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            9999887643     57789999999999999988 9999999999999999988889999864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.3e-39  Score=277.45  Aligned_cols=249  Identities=18%  Similarity=0.193  Sum_probs=210.5

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe-----------------------------------------cccceeeEeecCC--
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG-----------------------------------------LTSWEEFSLIQSP--   41 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~-----------------------------------------~g~~~~~~~v~~~--   41 (270)
                      +++|+|+++|++|++|++||+|++                                         .|+|+||++++++  
T Consensus        67 E~~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~  146 (398)
T 2dph_A           67 EITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADY  146 (398)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHH
T ss_pred             ceEEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccC
Confidence            457778889999999999999984                                         2889999999987  


Q ss_pred             ccceeccCCCCCccc-c----ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 042426           42 QLLIKILDTSVPLPY-Y----TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSK  115 (270)
Q Consensus        42 ~~~~~~~p~~~~~~~-~----~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~  115 (270)
                      . ++++ |++  +++ +    +|+++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++
T Consensus       147 ~-~~~i-P~~--~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~  220 (398)
T 2dph_A          147 M-LLKF-GDK--EQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNP  220 (398)
T ss_dssp             H-CEEC-SSH--HHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCH
T ss_pred             e-EEEC-CCC--CChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCH
Confidence            8 9999 998  554 3    688999999999999 6789999999999997 9999999999999999 999999999


Q ss_pred             HHHHHHHHHhCCCceeecCCchhH-HHHHHhHcCC-CccEEEeCCCcc---------------hHHHHHHccccCCEEEE
Q 042426          116 EKVDLLKHKFGFDDAFNYKEEPDL-DAALNRCFPE-GIDIYFENVGGK---------------MLDAVLLNMRICGHIAV  178 (270)
Q Consensus       116 ~~~~~~~~~~g~~~vi~~~~~~~~-~~~i~~~~~~-~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~  178 (270)
                      ++++.++ ++|++ ++|+++. ++ .+.+++.+++ ++|++|||+|+.               .++.++++++++|+++.
T Consensus       221 ~~~~~a~-~lGa~-~i~~~~~-~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~  297 (398)
T 2dph_A          221 ERLKLLS-DAGFE-TIDLRNS-APLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI  297 (398)
T ss_dssp             HHHHHHH-TTTCE-EEETTSS-SCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEEC
T ss_pred             HHHHHHH-HcCCc-EEcCCCc-chHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEE
Confidence            9999998 99995 8898876 65 8888888877 899999999975               58999999999999999


Q ss_pred             Eccccccccc-------CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee--e--eeeeecCcccH
Q 042426          179 CGMISQYNIE-------KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV--Y--VEDIAEGLEKA  247 (270)
Q Consensus       179 ~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~~~~~  247 (270)
                      +|........       .....++...++.+++++.+.....     .+.++++++++.+|+++  +  .++++|+++++
T Consensus       298 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~  372 (398)
T 2dph_A          298 PGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV-----TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQA  372 (398)
T ss_dssp             CSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG-----GGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTH
T ss_pred             eccccccccccccccccCCcccccHHHHhhcCCEEEEeccCc-----HHHHHHHHHHHHcCCCCccchhhEEEEEcHHHH
Confidence            9875210000       0112345667788899988765432     35688999999999998  6  57789999999


Q ss_pred             HHHHHHHhcCCccceEEEEec
Q 042426          248 PSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       248 ~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      ++|++.+.+++. +|+|++++
T Consensus       373 ~~A~~~~~~~~~-gKvvv~~~  392 (398)
T 2dph_A          373 PDGYAKFDKGSP-AKFVIDPH  392 (398)
T ss_dssp             HHHHHHHHTTCS-CEEEECTT
T ss_pred             HHHHHHHhcCCc-eEEEEecC
Confidence            999999998887 99999875

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.2e-39  Score=272.95  Aligned_cols=251  Identities=19%  Similarity=0.166  Sum_probs=209.1

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe---------------------------------------c-ccceeeEeecCC--c
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG---------------------------------------L-TSWEEFSLIQSP--Q   42 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~---------------------------------------~-g~~~~~~~v~~~--~   42 (270)
                      +++|+|+++|++|++|++||+|+.                                       . |+|+||++++++  +
T Consensus        68 E~~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~  147 (398)
T 1kol_A           68 EITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFN  147 (398)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHH
T ss_pred             ccEEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCe
Confidence            456778889999999999999973                                       1 789999999987  8


Q ss_pred             cceeccCCCCCccc-c----ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Q 042426           43 LLIKILDTSVPLPY-Y----TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKE  116 (270)
Q Consensus        43 ~~~~~~p~~~~~~~-~----~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~  116 (270)
                       ++++ |++  +++ +    +|+++.+++|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++
T Consensus       148 -~~~~-P~~--~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~  221 (398)
T 1kol_A          148 -LLKL-PDR--DKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPA  221 (398)
T ss_dssp             -CEEC-SCH--HHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred             -EEEC-CCC--cchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHH
Confidence             9999 988  554 3    5899999999999995 789999999999996 9999999999999999 7999999999


Q ss_pred             HHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCcc----------------hHHHHHHccccCCEEEEE
Q 042426          117 KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGK----------------MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       117 ~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~----------------~~~~~~~~l~~~G~~v~~  179 (270)
                      +++.++ ++|++ ++++++..++.+.+++.+++ ++|+||||+|+.                .++.++++++++|+++.+
T Consensus       222 ~~~~a~-~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~  299 (398)
T 1kol_A          222 RLAHAK-AQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP  299 (398)
T ss_dssp             HHHHHH-HTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred             HHHHHH-HcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence            999998 99997 78887652488889888877 899999999975                688999999999999999


Q ss_pred             cccc-ccccc------CCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee---eeeeeecCcccHHH
Q 042426          180 GMIS-QYNIE------KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV---YVEDIAEGLEKAPS  249 (270)
Q Consensus       180 g~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~  249 (270)
                      |... .....      .....++...++.+++++.+....     ..+.++++++++.+|+++   +.++++|+++++++
T Consensus       300 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~  374 (398)
T 1kol_A          300 GLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP-----VMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPR  374 (398)
T ss_dssp             SCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC-----HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHH
T ss_pred             ccccCCcccccccccccccccccHHHHhhcccEEEecccC-----hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHH
Confidence            8752 11000      011234556677888888875432     256788999999999998   45778999999999


Q ss_pred             HHHHHhcCCccceEEEEecC
Q 042426          250 ALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       250 a~~~~~~~~~~gk~vv~~~~  269 (270)
                      |++.+.+++. +|+|++++.
T Consensus       375 A~~~~~~~~~-gKvvi~~~~  393 (398)
T 1kol_A          375 GYGEFDAGVP-KKFVIDPHK  393 (398)
T ss_dssp             HHHHHHHTCS-CEEEECTTC
T ss_pred             HHHHHhCCCc-eEEEEEeCC
Confidence            9999998887 999998753

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=9.8e-39  Score=268.98  Aligned_cols=242  Identities=14%  Similarity=0.136  Sum_probs=206.8

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe--------------------------------------cccceeeEeecCCcccee
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG--------------------------------------LTSWEEFSLIQSPQLLIK   46 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~   46 (270)
                      +++|+|+++|++|++|++||+|+.                                      .|+|+||+++++++ +++
T Consensus        77 E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~  155 (366)
T 1yqd_A           77 EIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERY-IIR  155 (366)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGG-CEE
T ss_pred             ceEEEEEEECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhh-EEE
Confidence            456778889999999999999973                                      28899999999999 999


Q ss_pred             ccCCCCCccc-cccccCchhhhHHHHhhhhcCCC-CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 042426           47 ILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPK-KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK  124 (270)
Q Consensus        47 ~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~-~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~  124 (270)
                      + |++  +++ ++|++++++.|||+++.+ .+++ +|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++++
T Consensus       156 ~-P~~--ls~~~aa~l~~~~~ta~~al~~-~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~  230 (366)
T 1yqd_A          156 F-PDN--MPLDGGAPLLCAGITVYSPLKY-FGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN  230 (366)
T ss_dssp             C-CTT--SCTTTTGGGGTHHHHHHHHHHH-TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT
T ss_pred             C-CCC--CCHHHhhhhhhhHHHHHHHHHh-cCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh
Confidence            9 999  555 488999999999999965 5787 9999999996 9999999999999999999999999998887768


Q ss_pred             hCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhc
Q 042426          125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKR  203 (270)
Q Consensus       125 ~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  203 (270)
                      +|+++++|+++. +   .+.+.+ +++|++||++|.. .++.++++++++|+++.+|....      ...++...++.++
T Consensus       231 lGa~~v~~~~~~-~---~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~  299 (366)
T 1yqd_A          231 FGADSFLVSRDQ-E---QMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK------PLELPAFSLIAGR  299 (366)
T ss_dssp             SCCSEEEETTCH-H---HHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSS------CEEECHHHHHTTT
T ss_pred             cCCceEEeccCH-H---HHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCC------CCCcCHHHHHhCC
Confidence            999999998764 3   344444 3799999999975 78999999999999999987542      1235566778899


Q ss_pred             ceeeeccccCcccchHHHHHHHHHHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          204 ICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      +++.++....     .+.++++++++.+|++++.+ ++|+++++++|++.+.+++..||+|+++++
T Consensus       300 ~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~  359 (366)
T 1yqd_A          300 KIVAGSGIGG-----MKETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDVGN  359 (366)
T ss_dssp             CEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECHHH
T ss_pred             cEEEEecCCC-----HHHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEccc
Confidence            9999887644     46788999999999999876 689999999999999999889999998753

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.2e-39  Score=269.40  Aligned_cols=253  Identities=21%  Similarity=0.295  Sum_probs=201.5

Q ss_pred             CCcccceEEEEe-ecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHH
Q 042426            2 QPLSGYGVSKVL-DSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYG   70 (270)
Q Consensus         2 ~~i~g~g~v~~v-G~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~   70 (270)
                      |.++|++.+++| ..++++|++||+|++.         |+|+||+++++++ ++++ |++  +++ ++|++++++.|||.
T Consensus        61 p~v~G~E~~G~V~~~~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~--l~~~~aa~~~~~~~ta~~  136 (328)
T 1xa0_A           61 PFVPGIDLAGVVVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEW-LVPL-PKG--LTLKEAMAIGTAGFTAAL  136 (328)
T ss_dssp             SBCCCSEEEEEEEECCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGG-CEEC-CTT--CCHHHHHHHHHHHHHHHH
T ss_pred             CcccCcceEEEEEecCCCCCCCCCEEEEccccCCCCCCccceeEEEechHH-eEEC-CCC--CCHHHhhhhhhhHHHHHH
Confidence            557776665553 2467899999999852         8999999999999 9999 999  665 48888989999998


Q ss_pred             Hhhh--hcCCCCCc-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHc
Q 042426           71 GLHE--LCSPKKGE-YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        71 ~l~~--~~~~~~g~-~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      +++.  .+++++|+ +|||+|++|++|++++|+|+.+|++|+++++++++++.++ ++|+++++|+++. + .+.+++..
T Consensus       137 ~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~-~~~~~~~~  213 (328)
T 1xa0_A          137 SIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVLAREDV-M-AERIRPLD  213 (328)
T ss_dssp             HHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEEECC-----------CC
T ss_pred             HHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCc-H-HHHHHHhc
Confidence            8753  36788987 9999999999999999999999999999999999999998 8999999998764 3 34445544


Q ss_pred             CCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHH
Q 042426          148 PEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVM  226 (270)
Q Consensus       148 ~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  226 (270)
                      .+++|++|||+|++.+..++++++++|+++.+|....     .....+...++.+++++.|++.... .....+.++++.
T Consensus       214 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  288 (328)
T 1xa0_A          214 KQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGG-----AEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLA  288 (328)
T ss_dssp             SCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSS-----SCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHH
T ss_pred             CCcccEEEECCcHHHHHHHHHhhccCCEEEEEeecCC-----CCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHH
Confidence            4489999999999999999999999999999987542     1123445567789999998754322 122345677888


Q ss_pred             HHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEec
Q 042426          227 LAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVA  268 (270)
Q Consensus       227 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  268 (270)
                      +++++| +++. .++|+++++++|++.+.+++..||+|++++
T Consensus       289 ~~~~~g-l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          289 GDLKPD-LERI-AQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             TTTCCC-HHHH-EEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             HHHHcC-Ccee-eeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            888888 7764 589999999999999999988999999864

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=6.7e-40  Score=275.40  Aligned_cols=238  Identities=15%  Similarity=0.116  Sum_probs=206.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-----------------------------------ccceeeEeecCCccceeccC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-----------------------------------TSWEEFSLIQSPQLLIKILD   49 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-----------------------------------g~~~~~~~v~~~~~~~~~~p   49 (270)
                      +++| |+++|++ ++|++||||++.                                   |+|+||+++++++ ++++ |
T Consensus        64 E~~G-V~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P  139 (357)
T 2b5w_A           64 EAVG-VVVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKY-LVRI-P  139 (357)
T ss_dssp             EEEE-EEEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGG-EEEC-C
T ss_pred             eeEE-EEEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHH-eEEC-C
Confidence            5667 8888999 999999999752                                   8899999999999 9999 9


Q ss_pred             CCCCccccccccCchhhhHHHHhhhhcCCCCC------cEEEEecCCchHHHHH-HHHH-HHcCCE-EEEEeCCHH---H
Q 042426           50 TSVPLPYYTGILGMPGLTAYGGLHELCSPKKG------EYVYVSAASGAVGQLV-GQFV-KLVGCY-VVGSARSKE---K  117 (270)
Q Consensus        50 ~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g------~~vlI~ga~g~vG~~a-i~la-~~~g~~-v~~~~~~~~---~  117 (270)
                      ++  ++ ++|+++.+++|||+++ +.+++++|      ++|||+|+ |++|+++ +|+| +.+|++ |++++++++   +
T Consensus       140 ~~--~~-~~aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~  214 (357)
T 2b5w_A          140 RS--QA-ELGFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPT  214 (357)
T ss_dssp             GG--GS-TTGGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHH
T ss_pred             CC--cc-hhhhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHH
Confidence            99  55 6778999999999999 66889999      99999999 9999999 9999 999996 999999888   9


Q ss_pred             HHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccch
Q 042426          118 VDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL  196 (270)
Q Consensus       118 ~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  196 (270)
                      ++.++ ++|++++ |+++. ++.+ +.+. ++++|++|||+|+. .++.++++++++|+++.+|....     ....++.
T Consensus       215 ~~~~~-~lGa~~v-~~~~~-~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~  284 (357)
T 2b5w_A          215 IDIIE-ELDATYV-DSRQT-PVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSD-----WAFEVDA  284 (357)
T ss_dssp             HHHHH-HTTCEEE-ETTTS-CGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCC-----CCCCCCH
T ss_pred             HHHHH-HcCCccc-CCCcc-CHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCC-----CCceecH
Confidence            99998 9999988 98876 7777 7777 55899999999985 88999999999999999987542     1123455


Q ss_pred             HHH----HhhcceeeeccccCcccchHHHHHHHHHHHHCC--c-eeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          197 MQV----VGKRICMEGFLAGDFYHQYPKFLELVMLAIKEG--K-LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       197 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      ..+    +.+++++.++...+     .+.++++++++++|  + +++.++++|+++++++|++.+   +..||+|+++++
T Consensus       285 ~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~  356 (357)
T 2b5w_A          285 GAFHREMVLHNKALVGSVNSH-----VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST  356 (357)
T ss_dssp             HHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred             HHHhHHHHhCCeEEEEeccCC-----HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence            556    78899999877654     57899999999999  9 688888999999999999988   357899999864

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=3.4e-40  Score=274.55  Aligned_cols=254  Identities=21%  Similarity=0.305  Sum_probs=205.0

Q ss_pred             CCcccceEEEEe-ecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHH
Q 042426            2 QPLSGYGVSKVL-DSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYG   70 (270)
Q Consensus         2 ~~i~g~g~v~~v-G~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~   70 (270)
                      |.++|++.+++| ..++++|++||||++.         |+|+||+++++++ ++++ |++  +++ ++|++++++.|||.
T Consensus        62 p~i~G~E~~G~V~~~~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~--l~~~~aa~l~~~~~ta~~  137 (330)
T 1tt7_A           62 PLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDW-LVPL-PQN--LSLKEAMVYGTAGFTAAL  137 (330)
T ss_dssp             SEECCSEEEEEEEECSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGG-EEEC-CTT--CCHHHHHHHHHHHHHHHH
T ss_pred             CccccceEEEEEEEcCCCCCCCCCEEEEcccccCCCCCccceeEEEecHHH-eEEC-CCC--CCHHHHhhccchHHHHHH
Confidence            456666555543 2467889999999852         8999999999999 9999 999  665 48888989999998


Q ss_pred             Hhhh--hcCCCCCc-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHc
Q 042426           71 GLHE--LCSPKKGE-YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        71 ~l~~--~~~~~~g~-~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      +++.  .+++++|+ +|||+|++|++|++++|+|+.+|++|+++++++++++.++ ++|+++++|+++. + .+.+++..
T Consensus       138 ~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~v~~~~~~-~-~~~~~~~~  214 (330)
T 1tt7_A          138 SVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISREDV-Y-DGTLKALS  214 (330)
T ss_dssp             HHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHHH-C-SSCCCSSC
T ss_pred             HHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-h-HHHHHHhh
Confidence            8753  36788987 9999999999999999999999999999999999999998 8999999886542 2 12233333


Q ss_pred             CCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-ccchHHHHHHHH
Q 042426          148 PEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-YHQYPKFLELVM  226 (270)
Q Consensus       148 ~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  226 (270)
                      .+++|++|||+|++.+..++++++++|+++.+|....     .....+...++.+++++.|++.... .....+.++++.
T Consensus       215 ~~~~d~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  289 (330)
T 1tt7_A          215 KQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGG-----GEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMS  289 (330)
T ss_dssp             CCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSC-----SCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTT
T ss_pred             cCCccEEEECCcHHHHHHHHHhhcCCCEEEEEecCCC-----CccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHH
Confidence            3489999999999999999999999999999987542     1123445567789999998754322 122345677888


Q ss_pred             HHHHCCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          227 LAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       227 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +++++|++++.++++|+++++++|++.+.+++..||+|+++
T Consensus       290 ~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          290 SDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             TTSCCSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHhcCCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            88889999998889999999999999999988899999864

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=3.1e-40  Score=279.24  Aligned_cols=249  Identities=18%  Similarity=0.193  Sum_probs=208.9

Q ss_pred             ccceEEEEeecCC-CCCCCCCEEEec--ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCC
Q 042426            5 SGYGVSKVLDSTH-PNYKKDDLVWGL--TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKK   80 (270)
Q Consensus         5 ~g~g~v~~vG~~v-~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~   80 (270)
                      +++|+|+++|++| ++|++||+|++.  |+|+||+++++++ ++++ |++  +++ ++|++++.++|||+++.. .. ++
T Consensus        97 e~~G~V~~vG~~v~~~~~vGdrV~~~~~G~~aey~~v~~~~-~~~i-P~~--~~~~~aa~l~~~~~ta~~~~~~-~~-~~  170 (379)
T 3iup_A           97 EGAGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQ-CLVL-PEG--ATPADGASSFVNPLTALGMVET-MR-LE  170 (379)
T ss_dssp             CEEEEEEEECSSHHHHTTTTCEEEECCSCCSBSEEEEEGGG-EEEC-CTT--CCHHHHTTSSHHHHHHHHHHHH-HH-HT
T ss_pred             eeEEEEEEeCCCcccCCCCCCEEEecCCCcceeEEEeCHHH-eEEC-CCC--CCHHHHHhhhhhHHHHHHHHHH-hc-cC
Confidence            4577888899999 899999999998  9999999999999 9999 999  565 489999999999988754 44 89


Q ss_pred             CcEEEEec-CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCC
Q 042426           81 GEYVYVSA-ASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENV  158 (270)
Q Consensus        81 g~~vlI~g-a~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~  158 (270)
                      |++|||+| |+|++|++++|+|+.+|++|+++++++++++.++ ++|+++++|+++. ++.+.+++.+++ ++|++|||+
T Consensus       171 g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~-~~~~~v~~~t~~~g~d~v~d~~  248 (379)
T 3iup_A          171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHVCNAASP-TFMQDLTEALVSTGATIAFDAT  248 (379)
T ss_dssp             TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTCSCEEETTST-THHHHHHHHHHHHCCCEEEESC
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCCcEEEeCCCh-HHHHHHHHHhcCCCceEEEECC
Confidence            99999996 7899999999999999999999999999999999 9999999999987 899999998887 999999999


Q ss_pred             Ccc-hHHHHHHccc-----cC-----------CEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-----cc
Q 042426          159 GGK-MLDAVLLNMR-----IC-----------GHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-----YH  216 (270)
Q Consensus       159 g~~-~~~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  216 (270)
                      |++ .++.++++++     ++           |+++.+|..+..       +.+....+.+++++.|++..++     +.
T Consensus       249 g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~-------~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  321 (379)
T 3iup_A          249 GGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS-------PTEFNRNFGMAWGMGGWLLFPFLQKIGRE  321 (379)
T ss_dssp             EEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE-------EEEECCCSCSCEEEEECCHHHHHHHHCHH
T ss_pred             CchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC-------ccccccccccceEEEEEEeeeecccCCHH
Confidence            985 6678888885     33           666666654321       1122234567889998877554     23


Q ss_pred             chHHHHHHHHHHHHCCceeeeeeeecCcccH--HHHHHHHhcCCccceEEEEecC
Q 042426          217 QYPKFLELVMLAIKEGKLVYVEDIAEGLEKA--PSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       217 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      ...+.++++.+++.+ .+++.++++|+++++  ++|++.+.+++..||+||+++.
T Consensus       322 ~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~  375 (379)
T 3iup_A          322 RANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINPNK  375 (379)
T ss_dssp             HHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred             HHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeCCC
Confidence            334566788888888 588999999999999  9999999999999999999864

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1.5e-38  Score=261.48  Aligned_cols=239  Identities=22%  Similarity=0.254  Sum_probs=204.0

Q ss_pred             CCcccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCcccc-ccccCchhhhHHHHhhhhcC
Q 042426            2 QPLSGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPYY-TGILGMPGLTAYGGLHELCS   77 (270)
Q Consensus         2 ~~i~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~~-~a~l~~~~~ta~~~l~~~~~   77 (270)
                      |.++|++.+++|-        ||+|+++   |+|+||+++++++ ++++ |++  ++++ +|+++++++|||+++.+.+ 
T Consensus        56 p~i~G~e~~G~V~--------GdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~--~~~~~aa~l~~~~~ta~~~l~~~~-  122 (302)
T 1iz0_A           56 PFIPGMEVVGVVE--------GRRYAALVPQGGLAERVAVPKGA-LLPL-PEG--LSPEEAAAFPVSFLTAYLALKRAQ-  122 (302)
T ss_dssp             SBCCCCEEEEEET--------TEEEEEECSSCCSBSEEEEEGGG-CEEC-CTT--CCHHHHHTSHHHHHHHHHHHHHTT-
T ss_pred             CCcccceEEEEEE--------CcEEEEecCCcceeeEEEEcHHH-cEeC-CCC--CCHHHHHHhhhHHHHHHHHHHHhc-
Confidence            6688999998874        9999987   9999999999999 9999 999  6664 8899999999999997777 


Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCC-chhHHHHHHhHcCCCccEEEe
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKE-EPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      +++|++|+|+|++|++|++++|+++..|++|+++++++++++.++ ++|+++++|+++ . ++.+.+     +++|++||
T Consensus       123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~~-~~~~~~-----~~~d~vid  195 (302)
T 1iz0_A          123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEVP-ERAKAW-----GGLDLVLE  195 (302)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGGHH-HHHHHT-----TSEEEEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEECCcch-hHHHHh-----cCceEEEE
Confidence            999999999999999999999999999999999999999999998 899999998876 5 665554     46999999


Q ss_pred             CCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHH---HHHCCc
Q 042426          157 NVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVML---AIKEGK  233 (270)
Q Consensus       157 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~  233 (270)
                       +|+..++.++++++++|+++.+|.....     ....+...++.+++++.++....+ ....+.++++.+   ++.+|+
T Consensus       196 -~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~g~  268 (302)
T 1iz0_A          196 -VRGKEVEESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLAVLGFWLTPL-LREGALVEEALGFLLPRLGRE  268 (302)
T ss_dssp             -CSCTTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH-TTCHHHHHHHHHHHGGGBTTT
T ss_pred             -CCHHHHHHHHHhhccCCEEEEEeCCCCC-----CCCcCHHHHHhCCCeEEEEeccch-hhhHHHHHHHHhhhHHHHcCC
Confidence             9989999999999999999999875431     113445567889999998876432 223577888999   999999


Q ss_pred             eeeeeeeecCcccHHHHHHHHhcCCccceEEEEe
Q 042426          234 LVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAV  267 (270)
Q Consensus       234 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  267 (270)
                      +++.++++|+++++++|++.+.+++..||+|+++
T Consensus       269 l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          269 LRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             BCCCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             cccccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9999989999999999999999988889999874

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=1.2e-36  Score=256.43  Aligned_cols=244  Identities=15%  Similarity=0.135  Sum_probs=202.1

Q ss_pred             CCcccceEEEEee-cCCCCCCCCCEEEe--------------------------------c-ccceeeEeecCCccceec
Q 042426            2 QPLSGYGVSKVLD-STHPNYKKDDLVWG--------------------------------L-TSWEEFSLIQSPQLLIKI   47 (270)
Q Consensus         2 ~~i~g~g~v~~vG-~~v~~~~~Gd~V~~--------------------------------~-g~~~~~~~v~~~~~~~~~   47 (270)
                      |.++|++.+++|- ++ ++|++||+|++                                . |+|+||+++++++ ++++
T Consensus        61 p~v~G~E~~G~V~~~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~-~~~i  138 (366)
T 2cdc_A           61 FLVLGHEAIGVVEESY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKY-LVKI  138 (366)
T ss_dssp             CEECCSEEEEEECSCC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGG-EEEE
T ss_pred             CCcCCcceEEEEEeCC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHH-eEEC
Confidence            5677777766653 55 78999999984                                2 8999999999999 9999


Q ss_pred             cCCCCCccccccccCchhhhHHHHhh--h--hcCCC--C-------CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           48 LDTSVPLPYYTGILGMPGLTAYGGLH--E--LCSPK--K-------GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        48 ~p~~~~~~~~~a~l~~~~~ta~~~l~--~--~~~~~--~-------g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                       |++  ++ +.|+++.++.|||+++.  +  .++++  +       |++|||+|+ |++|++++|+++.+|++|++++++
T Consensus       139 -P~~--l~-~~Aal~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~  213 (366)
T 2cdc_A          139 -PKS--IE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRR  213 (366)
T ss_dssp             -CGG--GT-TTGGGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             -cCC--cc-hhhhhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC
Confidence             999  55 55678899999999997  4  67888  8       999999999 999999999999999999999998


Q ss_pred             H---HHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hH-HHHHHccccCCEEEEEcccccccccC
Q 042426          115 K---EKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-ML-DAVLLNMRICGHIAVCGMISQYNIEK  189 (270)
Q Consensus       115 ~---~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~~~~~~  189 (270)
                      +   ++.+.++ ++|++++ | ++  ++.+.+.+ +.+++|++||++|.. .+ +.++++++++|+++.+|....     
T Consensus       214 ~~~~~~~~~~~-~~ga~~v-~-~~--~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~-----  282 (366)
T 2cdc_A          214 EPTEVEQTVIE-ETKTNYY-N-SS--NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTS-----  282 (366)
T ss_dssp             CCCHHHHHHHH-HHTCEEE-E-CT--TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCS-----
T ss_pred             ccchHHHHHHH-HhCCcee-c-hH--HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCC-----
Confidence            8   8889888 9999877 7 44  55556655 335799999999985 77 899999999999999987542     


Q ss_pred             CCCccchHH---HHhhcceeeeccccCcccchHHHHHHHHHHHHCCc------eeeeeeeecCcccHHHHHHHH-hcCCc
Q 042426          190 PEGVHNLMQ---VVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGK------LVYVEDIAEGLEKAPSALVGI-FTGQN  259 (270)
Q Consensus       190 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~a~~~~-~~~~~  259 (270)
                      ....++...   ++.+++++.|+....     .+.++++.+++.+|+      +++.++++|+++++++|++.+ .++..
T Consensus       283 ~~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~  357 (366)
T 2cdc_A          283 GSVPLDYKTLQEIVHTNKTIIGLVNGQ-----KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHG  357 (366)
T ss_dssp             CEEEEEHHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTT
T ss_pred             CccccChhhhHHHHhcCcEEEEecCCC-----HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCC
Confidence            112345555   788999999876543     578899999999999      567788899999999999994 33667


Q ss_pred             cceEEEEec
Q 042426          260 VGKQLVAVA  268 (270)
Q Consensus       260 ~gk~vv~~~  268 (270)
                      .||+|++++
T Consensus       358 ~gKvvi~~~  366 (366)
T 2cdc_A          358 EIKIRILWE  366 (366)
T ss_dssp             CCEEEEECC
T ss_pred             ceEEEEecC
Confidence            899999874

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=4e-33  Score=277.73  Aligned_cols=250  Identities=20%  Similarity=0.210  Sum_probs=212.0

Q ss_pred             CcccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCC
Q 042426            3 PLSGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSP   78 (270)
Q Consensus         3 ~i~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~   78 (270)
                      .+.|.+.++.+       ++||+|+++   |+|+||++++++. ++++ |++  +++ ++|+++++++|||+++.+.+++
T Consensus      1597 ~~lG~E~aG~V-------~vGdrV~g~~~~G~~Aeyv~vp~~~-v~~i-Pd~--ls~~eAA~lp~~~~TA~~al~~~a~l 1665 (2512)
T 2vz8_A         1597 CMLGMEFSGRD-------ASGRRVMGMVPAEGLATSVLLLQHA-TWEV-PST--WTLEEAASVPIVYTTAYYSLVVRGRM 1665 (2512)
T ss_dssp             SCCCCEEEEEE-------TTSCCEEEECSSCCSBSEEECCGGG-EEEC-CTT--SCHHHHTTSHHHHHHHHHHHTTTTCC
T ss_pred             CceEEEEEEEE-------ccCCEEEEeecCCceeeEEEcccce-EEEe-CCC--CCHHHHHHhHHHHHHHHHHHHHHhcC
Confidence            35677777665       489999987   8999999999999 9999 999  666 4899999999999999888999


Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCC-CccEE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPE-GIDIY  154 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v  154 (270)
                      ++|++|||+||+|++|++++|+|+..|++|+++++++++.+.+++.   +|+++++++++. ++.+.+.+.+++ |+|+|
T Consensus      1666 ~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvV 1744 (2512)
T 2vz8_A         1666 QPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDT-SFEQHVLRHTAGKGVDLV 1744 (2512)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSS-HHHHHHHHTTTSCCEEEE
T ss_pred             CCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCH-HHHHHHHHhcCCCCceEE
Confidence            9999999999999999999999999999999999999999999843   678899999887 899999998887 99999


Q ss_pred             EeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc----ccchHHHHHHHHHHHH
Q 042426          155 FENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF----YHQYPKFLELVMLAIK  230 (270)
Q Consensus       155 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  230 (270)
                      |||+++..+..++++++++|+++.+|......     ........+.+++++.+.....+    +....+.++.+.+.+.
T Consensus      1745 ld~~g~~~l~~~l~~L~~~Gr~V~iG~~~~~~-----~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~ 1819 (2512)
T 2vz8_A         1745 LNSLAEEKLQASVRCLAQHGRFLEIGKFDLSN-----NHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQ 1819 (2512)
T ss_dssp             EECCCHHHHHHHHTTEEEEEEEEECCCHHHHT-----TCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHT
T ss_pred             EECCCchHHHHHHHhcCCCcEEEEeecccccc-----cCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHH
Confidence            99999889999999999999999998754211     11112345678899988876543    2234455666666777


Q ss_pred             CCceeeeeeeecCcccHHHHHHHHhcCCccceEEEEecC
Q 042426          231 EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVAR  269 (270)
Q Consensus       231 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  269 (270)
                      +|.+++.+.++|+++++++|++.+.+++..||+|+++++
T Consensus      1820 ~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~~ 1858 (2512)
T 2vz8_A         1820 EGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVRE 1858 (2512)
T ss_dssp             TTCSCCCCEEEEESSTHHHHHHHHHTTCCSSEEEEECSC
T ss_pred             cCCcCCCcceEecHHHHHHHHHhhhccCccceEEEECCC
Confidence            899999988999999999999999999999999999854

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.93  E-value=1.2e-25  Score=173.49  Aligned_cols=190  Identities=19%  Similarity=0.294  Sum_probs=143.4

Q ss_pred             CccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 042426           41 PQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD  119 (270)
Q Consensus        41 ~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~  119 (270)
                      ++ ++++ |++  +++ ++|+++++++|||+++.+.+++++|++|+|+|++|++|++++|+++..|++|+++++++++.+
T Consensus         2 ~~-~~~~-P~~--~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~   77 (198)
T 1pqw_A            2 DL-VVPI-PDT--LADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE   77 (198)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred             Cc-eeEC-CCC--CCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            45 8899 999  565 488888999999999987889999999999999999999999999999999999999999888


Q ss_pred             HHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHH
Q 042426          120 LLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQ  198 (270)
Q Consensus       120 ~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  198 (270)
                      .++ ++|++.++|+++. ++.+.+.+.+.+ ++|+++|++|...++.++++++++|+++.+|.....    .....+.. 
T Consensus        78 ~~~-~~g~~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~-  150 (198)
T 1pqw_A           78 MLS-RLGVEYVGDSRSV-DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVY----ADASLGLA-  150 (198)
T ss_dssp             HHH-TTCCSEEEETTCS-THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGT----TTCEEEGG-
T ss_pred             HHH-HcCCCEEeeCCcH-HHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCc----CcCcCChh-
Confidence            888 8899888888876 787888877765 899999999988999999999999999999885521    11112221 


Q ss_pred             HHhhcceeeeccccC----cccchHHHHHHHHHHHHCCceeeeeeee
Q 042426          199 VVGKRICMEGFLAGD----FYHQYPKFLELVMLAIKEGKLVYVEDIA  241 (270)
Q Consensus       199 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~  241 (270)
                      .+.+++++.+++...    ......+.++++.+++++|++++.+.++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          151 ALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             GGTTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             HhcCCcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence            345778877654311    1112256789999999999999876543

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=99.08  E-value=1.4e-09  Score=91.30  Aligned_cols=147  Identities=13%  Similarity=0.031  Sum_probs=96.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +|.+|+|+|+ |++|+.+++.++.+|++|+++++++++.+.+++.+|.....+.....++.+.+.     ++|+|++|++
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~-----~aDvVi~~~~  240 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVK-----RADLVIGAVL  240 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHc-----CCCEEEECCC
Confidence            4789999998 999999999999999999999999999988874578764333333224555444     3899999997


Q ss_pred             cch-------HHHHHHccccCCEEEEEcccccccccC-CCCccchHHHHhhcceeeeccccCc--cc-----chHHHHHH
Q 042426          160 GKM-------LDAVLLNMRICGHIAVCGMISQYNIEK-PEGVHNLMQVVGKRICMEGFLAGDF--YH-----QYPKFLEL  224 (270)
Q Consensus       160 ~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~  224 (270)
                      .+.       ....++.|+++|+++.++...+..++. .+.+.+...+..+++++.+...-..  +.     ..+..++.
T Consensus       241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~~~~~  320 (377)
T 2vhw_A          241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATMPY  320 (377)
T ss_dssp             CTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHHHHHH
Confidence            643       678899999999999998643211111 1111222223345666544433211  11     11234566


Q ss_pred             HHHHHHCC
Q 042426          225 VMLAIKEG  232 (270)
Q Consensus       225 ~~~~~~~g  232 (270)
                      +.+++.+|
T Consensus       321 ~~~l~~~g  328 (377)
T 2vhw_A          321 VLELADHG  328 (377)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhCC
Confidence            77777666

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=99.08  E-value=6e-10  Score=93.08  Aligned_cols=145  Identities=14%  Similarity=0.027  Sum_probs=98.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD--AFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +++|+|+|+ |++|+++++.++.+|++|+++.+++++.+.++ +.+...  +++.... ++.+.+.     ++|++++|+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~-~~~~~~~~~~~~~~~-~~~~~~~-----~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLE-TLFGSRVELLYSNSA-EIETAVA-----EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHGGGSEEEECCHH-HHHHHHH-----TCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HhhCceeEeeeCCHH-HHHHHHc-----CCCEEEECC
Confidence            489999998 99999999999999999999999999999988 555443  3333333 5555443     499999999


Q ss_pred             Ccch-------HHHHHHccccCCEEEEEcccccccccCC-CCccchHHHHhhcceeeeccccCc--c-----cchHHHHH
Q 042426          159 GGKM-------LDAVLLNMRICGHIAVCGMISQYNIEKP-EGVHNLMQVVGKRICMEGFLAGDF--Y-----HQYPKFLE  223 (270)
Q Consensus       159 g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~  223 (270)
                      +.+.       .+..++.++++|+++.++...+..++.. ...++...+..+++++.+......  +     ...+..++
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~  318 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLP  318 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHH
Confidence            8643       6778899999999999987543211100 111222223346677666432111  1     11234567


Q ss_pred             HHHHHHHCCc
Q 042426          224 LVMLAIKEGK  233 (270)
Q Consensus       224 ~~~~~~~~g~  233 (270)
                      .+.+++++|.
T Consensus       319 ~l~~l~~~G~  328 (361)
T 1pjc_A          319 YVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHGG
T ss_pred             HHHHHHhCCc
Confidence            8888888874

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=99.03  E-value=4.3e-09  Score=88.22  Aligned_cols=148  Identities=15%  Similarity=0.056  Sum_probs=93.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      ++.+|+|+|+ |++|+.+++.++.+|++|+++++++++.+.+++.+|.....+..+..++.+.+.     ++|++++|++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~-----~~DvVi~~~g  238 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQ-----HADLLIGAVL  238 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHh-----CCCEEEECCC
Confidence            3589999998 999999999999999999999999999888874577763344444324555544     3899999998


Q ss_pred             cch-------HHHHHHccccCCEEEEEcccccccccCC-CCccchHHHHhhcceeeeccccCc--cc-----chHHHHHH
Q 042426          160 GKM-------LDAVLLNMRICGHIAVCGMISQYNIEKP-EGVHNLMQVVGKRICMEGFLAGDF--YH-----QYPKFLEL  224 (270)
Q Consensus       160 ~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~  224 (270)
                      ...       .+..++.++++|+++.++...+..++.. +...+...+..+++++.+......  +.     ...+.++.
T Consensus       239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~  318 (369)
T 2eez_A          239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPY  318 (369)
T ss_dssp             -------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHH
T ss_pred             CCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHH
Confidence            642       6788999999999999987542111000 111222233346676665542211  11     12345677


Q ss_pred             HHHHHHCCc
Q 042426          225 VMLAIKEGK  233 (270)
Q Consensus       225 ~~~~~~~g~  233 (270)
                      +.+++.+|.
T Consensus       319 l~~l~~~g~  327 (369)
T 2eez_A          319 VLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHhcCh
Confidence            788887774

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=99.01  E-value=4.5e-11  Score=101.36  Aligned_cols=160  Identities=14%  Similarity=0.067  Sum_probs=113.5

Q ss_pred             ceEEEEeecCCCCCCCCCEEEe------c------ccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhh
Q 042426            7 YGVSKVLDSTHPNYKKDDLVWG------L------TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHE   74 (270)
Q Consensus         7 ~g~v~~vG~~v~~~~~Gd~V~~------~------g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~   74 (270)
                      .+.+..+|++++++.+|+.++.      +      |++++|+...... ++++ |+.  ++.+.++...+..++|.++..
T Consensus        82 ~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~-a~~~-~k~--v~~~~~~~~~~~s~a~~av~~  157 (404)
T 1gpj_A           82 VRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRR-AINL-GKR--AREETRISEGAVSIGSAAVEL  157 (404)
T ss_dssp             HHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH-HHHH-HHH--HHHHSSTTCSCCSHHHHHHHH
T ss_pred             hhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHH-Hhhh-hcc--CcchhhhcCCCccHHHHHHHH
Confidence            3445568999999999998721      1      7888998888888 8888 877  443334445566778877643


Q ss_pred             hc---CCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHHHhCCCceeecCCchhHHHHHHhHcCC
Q 042426           75 LC---SPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKV-DLLKHKFGFDDAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        75 ~~---~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~-~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      ..   .-.+|++|+|+|+ |++|.++++.++..|+ +|+++.++.++. +.++ ++|++ ++++.   ++.+.+.     
T Consensus       158 a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~-~~g~~-~~~~~---~l~~~l~-----  226 (404)
T 1gpj_A          158 AERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR-DLGGE-AVRFD---ELVDHLA-----  226 (404)
T ss_dssp             HHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-HHTCE-ECCGG---GHHHHHH-----
T ss_pred             HHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HcCCc-eecHH---hHHHHhc-----
Confidence            22   1247899999998 9999999999999999 999999999887 4455 88875 34332   4444442     


Q ss_pred             CccEEEeCCCcc-hH--HHHHHc--c--ccCCEEEEEcc
Q 042426          150 GIDIYFENVGGK-ML--DAVLLN--M--RICGHIAVCGM  181 (270)
Q Consensus       150 ~~d~v~d~~g~~-~~--~~~~~~--l--~~~G~~v~~g~  181 (270)
                      ++|+|++|++.. .+  ...+..  +  +++|.++.++.
T Consensus       227 ~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdi  265 (404)
T 1gpj_A          227 RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDI  265 (404)
T ss_dssp             TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred             CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEc
Confidence            499999999864 21  244554  3  45676666655

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.80  E-value=1.3e-08  Score=85.80  Aligned_cols=145  Identities=13%  Similarity=0.061  Sum_probs=92.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eecCCc--------------hh----HH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-FNYKEE--------------PD----LD  140 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~--------------~~----~~  140 (270)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|++.++++++.+.++ ++|++.+ ++..+.              .+    ..
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~-~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            5889999997 99999999999999999999999988888888 7998644 233110              00    11


Q ss_pred             HHHHhHcCCCccEEEeCC---Ccc---h-HHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC
Q 042426          141 AALNRCFPEGIDIYFENV---GGK---M-LDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD  213 (270)
Q Consensus       141 ~~i~~~~~~~~d~v~d~~---g~~---~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (270)
                      +.+.+... ++|+|++|+   |.+   . ....++.|++++.++.++...+..+...   .+...+..+++++.+.....
T Consensus       249 ~~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~---~~~~~~~~~~v~i~g~~~~p  324 (384)
T 1l7d_A          249 EAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLS---EPGKIVVKHGVKIVGHTNVP  324 (384)
T ss_dssp             HHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTC---CTTCEEEETTEEEECCSSGG
T ss_pred             HHHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecc---cCCcEEEECCEEEEEeCCCc
Confidence            22333332 499999999   532   2 3788999999999999986432211111   11112234667777754321


Q ss_pred             cccchHHHHHHHHHHHHCCcee
Q 042426          214 FYHQYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~g~~~  235 (270)
                        .   ....++.+++.++.+.
T Consensus       325 --~---~~~~~a~~l~~~~~~~  341 (384)
T 1l7d_A          325 --S---RVAADASPLFAKNLLN  341 (384)
T ss_dssp             --G---GGHHHHHHHHHHHHHH
T ss_pred             --c---hhHHHHHHHHHHhHHH
Confidence              1   2234455666665443

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.70  E-value=9.6e-08  Score=82.24  Aligned_cols=106  Identities=18%  Similarity=0.199  Sum_probs=82.9

Q ss_pred             hhhhHHHHhhhhc-CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHH
Q 042426           64 PGLTAYGGLHELC-SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAA  142 (270)
Q Consensus        64 ~~~ta~~~l~~~~-~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~  142 (270)
                      ...++|.++.+.. ...+|++|+|+|. |.+|+.+++.++.+|++|+++.+++.+.+.++ ++|++ ++      ++.+.
T Consensus       256 ~~~s~~~g~~r~~~~~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-~~Ga~-~~------~l~e~  326 (494)
T 3ce6_A          256 TRHSLIDGINRGTDALIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAM-MEGFD-VV------TVEEA  326 (494)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHH
T ss_pred             hhhhhhHHHHhccCCCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCE-Ee------cHHHH
Confidence            3455666664332 2678999999997 99999999999999999999999999888887 88875 32      23332


Q ss_pred             HHhHcCCCccEEEeCCCcc-hHH-HHHHccccCCEEEEEcccc
Q 042426          143 LNRCFPEGIDIYFENVGGK-MLD-AVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       143 i~~~~~~~~d~v~d~~g~~-~~~-~~~~~l~~~G~~v~~g~~~  183 (270)
                      +.     ++|+|++|++.. .+. ..++.++++|+++.+|...
T Consensus       327 l~-----~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          327 IG-----DADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             GG-----GCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             Hh-----CCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence            22     489999999875 344 7889999999999998743

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.66  E-value=9.3e-08  Score=80.76  Aligned_cols=125  Identities=14%  Similarity=0.084  Sum_probs=82.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eecC-------------CchhH----HH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-FNYK-------------EEPDL----DA  141 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~-------------~~~~~----~~  141 (270)
                      ++.+|+|+|+ |.+|+.++++++.+|++|+++++++++.+.++ ++|+..+ ++..             .. ++    .+
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~-~lGa~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~  247 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEAGSGDGYAKVMSD-AFIKAEME  247 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH-HTTCEECCC--------CCHHHHHHSH-HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCEEEEecccccccccccchhhccH-HHHHHHHH
Confidence            4789999997 99999999999999999999999999888887 8888643 1211             01 11    11


Q ss_pred             HHHhHcCCCccEEEeCCCc------c-hHHHHHHccccCCEEEEEcccccccccCCCCccchH-HHHhhcceeeeccc
Q 042426          142 ALNRCFPEGIDIYFENVGG------K-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLM-QVVGKRICMEGFLA  211 (270)
Q Consensus       142 ~i~~~~~~~~d~v~d~~g~------~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  211 (270)
                      .+.+... ++|+|+++++.      . .....++.|++++.++.++...+..++..   .... .+..+++++.+...
T Consensus       248 ~l~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~---~~~~p~~~~~gv~i~g~~~  321 (401)
T 1x13_A          248 LFAAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYT---VPGEIFTTENGVKVIGYTD  321 (401)
T ss_dssp             HHHHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTC---CTTSEEECTTSCEEECCSC
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcc---cCCCceEEECCEEEEeeCC
Confidence            2322222 48999999522      1 23689999999999999987432212111   0000 12356777777543

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.58  E-value=4e-07  Score=72.69  Aligned_cols=106  Identities=17%  Similarity=0.234  Sum_probs=79.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD---AFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .|.++||+||++|+|.+.++.+...|++|+++.+++++++.+.+++|...   ..|..+.++..+.+.+...  |++|++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999999888877887642   2355554333333333222  369999


Q ss_pred             EeCCCcc-----------h---------------HHHHHHccccCCEEEEEcccccc
Q 042426          155 FENVGGK-----------M---------------LDAVLLNMRICGHIAVCGMISQY  185 (270)
Q Consensus       155 ~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~~  185 (270)
                      ++++|..           .               .+.++..|+.+|+++.+++....
T Consensus       108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~  164 (273)
T 4fgs_A          108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS  164 (273)
T ss_dssp             EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG
T ss_pred             EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc
Confidence            9999841           1               35566788888999999876543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.48  E-value=7.2e-07  Score=74.02  Aligned_cols=105  Identities=17%  Similarity=0.098  Sum_probs=75.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-e--------cCC---c---hhHHHHHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAF-N--------YKE---E---PDLDAALN  144 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi-~--------~~~---~---~~~~~~i~  144 (270)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|++.++++++.+.++ ++|++.+- +        +..   .   ..-.+.+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR-SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH-HTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            5689999998 99999999999999999999999999999998 78875221 1        000   0   00011222


Q ss_pred             hHcCCCccEEEeCCCc-----c--hHHHHHHccccCCEEEEEcccccccc
Q 042426          145 RCFPEGIDIYFENVGG-----K--MLDAVLLNMRICGHIAVCGMISQYNI  187 (270)
Q Consensus       145 ~~~~~~~d~v~d~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~~~  187 (270)
                      +.. .++|+|+.++..     +  ..+..++.+++++.++.++...+-.+
T Consensus       261 e~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~  309 (381)
T 3p2y_A          261 DAI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNC  309 (381)
T ss_dssp             HHH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred             HHH-hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence            222 249999998632     1  35789999999999999987655433

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.46  E-value=1.8e-07  Score=67.44  Aligned_cols=106  Identities=10%  Similarity=0.094  Sum_probs=75.0

Q ss_pred             hhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHh
Q 042426           66 LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNR  145 (270)
Q Consensus        66 ~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~  145 (270)
                      .+++.++.. .....+.+|+|+|+ |.+|.+.++.++..|++|++..+++++.+.+.++++.. +....   ++.+.+. 
T Consensus         7 sv~~~a~~~-~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~---~~~~~~~-   79 (144)
T 3oj0_A            7 SIPSIVYDI-VRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLIN---DIDSLIK-   79 (144)
T ss_dssp             SHHHHHHHH-HHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECS---CHHHHHH-
T ss_pred             cHHHHHHHH-HHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeec---CHHHHhc-
Confidence            455555533 22334889999997 99999999998888999999999999887766588853 22222   4444443 


Q ss_pred             HcCCCccEEEeCCCcchHHHHHHccccCCEEEEEccc
Q 042426          146 CFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       146 ~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                          ++|+|++|++..........+++++.++.++.+
T Consensus        80 ----~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           80 ----NNDVIITATSSKTPIVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             ----TCSEEEECSCCSSCSBCGGGCCTTCEEEECCSS
T ss_pred             ----CCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCC
Confidence                389999999874221123678888898888763

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.44  E-value=5.5e-07  Score=70.95  Aligned_cols=100  Identities=14%  Similarity=0.104  Sum_probs=72.1

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHc-C-
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCF-P-  148 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~-~-  148 (270)
                      ....+.++++||..|+ | .|..++.+++. +.+|+++..+++..+.+++.   .+.+.-+..... ++.+    .. . 
T Consensus        85 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~----~~~~~  156 (248)
T 2yvl_A           85 LKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-DFKD----AEVPE  156 (248)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-CTTT----SCCCT
T ss_pred             HhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-Chhh----cccCC
Confidence            4567889999999985 5 69999999988 88999999999988888733   243111222111 2211    11 2 


Q ss_pred             CCccEEEeCCCc--chHHHHHHccccCCEEEEEcc
Q 042426          149 EGIDIYFENVGG--KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       149 ~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +++|+|+...+.  ..++.+.+.|+++|+++....
T Consensus       157 ~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          157 GIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             TCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             CcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            379999988775  478899999999999987643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.39  E-value=2e-06  Score=68.15  Aligned_cols=105  Identities=14%  Similarity=0.158  Sum_probs=74.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      .|.+++|+||++++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+.++....+.+..  .+++|++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4679999999999999999999999999999999999888877666543   1235555423333332221  1369999


Q ss_pred             EeCCCcc-----------h---------------HHHHHHccccCCEEEEEccccc
Q 042426          155 FENVGGK-----------M---------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       155 ~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      ++++|..           .               .+.++..++.+|+++.+++...
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~  142 (255)
T 4eso_A           87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD  142 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence            9998731           0               2334445666899999987654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.31  E-value=5e-06  Score=69.61  Aligned_cols=102  Identities=14%  Similarity=0.125  Sum_probs=73.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-e------------cCCc--hhH----H
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAF-N------------YKEE--PDL----D  140 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi-~------------~~~~--~~~----~  140 (270)
                      ++.+|+|+|+ |.+|+.++++++.+|++|++.++++++.+.++ ++|...+- +            |...  .++    .
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA-SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH-HTTCEECCCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            4689999998 99999999999999999999999999999998 78875221 1            1110  011    1


Q ss_pred             HHHHhHcCCCccEEEeCCCc-----c--hHHHHHHccccCCEEEEEccccc
Q 042426          141 AALNRCFPEGIDIYFENVGG-----K--MLDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       141 ~~i~~~~~~~~d~v~d~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      +.+.+... +.|+||.|+..     +  ..+..++.++++..++.+....+
T Consensus       267 ~~l~e~l~-~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~G  316 (405)
T 4dio_A          267 ALVAEHIA-KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERG  316 (405)
T ss_dssp             HHHHHHHH-TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGT
T ss_pred             hHHHHHhc-CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCC
Confidence            12222211 49999999642     1  45789999999999999987544

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.30  E-value=9.3e-06  Score=64.12  Aligned_cols=106  Identities=19%  Similarity=0.235  Sum_probs=74.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .|.+++|+||++++|.+.++.+...|++|+++.+++++.+.+.+++   |..   ...|.+++++..+.+.+..  .|+.
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            4789999999999999999999999999999999988776654333   332   2235555534444444332  2379


Q ss_pred             cEEEeCCCcc-----------h---------------HHHHHHccc---cCCEEEEEcccccc
Q 042426          152 DIYFENVGGK-----------M---------------LDAVLLNMR---ICGHIAVCGMISQY  185 (270)
Q Consensus       152 d~v~d~~g~~-----------~---------------~~~~~~~l~---~~G~~v~~g~~~~~  185 (270)
                      |++++++|..           .               .+.++..|.   .+|+++.+++....
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~  150 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ  150 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc
Confidence            9999999831           0               244555552   35899999886653

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.29  E-value=8.6e-06  Score=56.08  Aligned_cols=91  Identities=18%  Similarity=0.248  Sum_probs=63.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +.+|+|+|+ |.+|..+++.+...| .+|+++++++++.+.+. ..+... ..|..+.    +.+.+... ++|+||+|+
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~----~~~~~~~~-~~d~vi~~~   77 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDE----AGLAKALG-GFDAVISAA   77 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCH----HHHHHHTT-TCSEEEECS
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCH----HHHHHHHc-CCCEEEECC
Confidence            468999999 999999999999999 79999999999888877 566542 2344443    22222222 599999999


Q ss_pred             CcchHHHHHHccc-cCCEEEE
Q 042426          159 GGKMLDAVLLNMR-ICGHIAV  178 (270)
Q Consensus       159 g~~~~~~~~~~l~-~~G~~v~  178 (270)
                      +..........+. .+..++.
T Consensus        78 ~~~~~~~~~~~~~~~g~~~~~   98 (118)
T 3ic5_A           78 PFFLTPIIAKAAKAAGAHYFD   98 (118)
T ss_dssp             CGGGHHHHHHHHHHTTCEEEC
T ss_pred             CchhhHHHHHHHHHhCCCEEE
Confidence            8654444444443 4444444

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.27  E-value=9e-06  Score=64.82  Aligned_cols=81  Identities=22%  Similarity=0.342  Sum_probs=59.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD---AFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .+.++||+||++++|.++++.+...|++|+++.++.++.+.+.++++...   ..|..+..+..+.+.+...  +++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46799999999999999999999999999999999988877765776541   2355554233333332211  369999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      ++++|.
T Consensus       106 vnnAg~  111 (266)
T 3grp_A          106 VNNAGI  111 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.25  E-value=1.4e-05  Score=63.68  Aligned_cols=81  Identities=11%  Similarity=0.150  Sum_probs=58.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+.++..+.+.+...  +++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            3578999999999999999999999999999999998887776455422   12355554233333333211  368999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      ++++|.
T Consensus        85 vnnAg~   90 (263)
T 2a4k_A           85 AHFAGV   90 (263)
T ss_dssp             EEGGGG
T ss_pred             EECCCC
Confidence            999873

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.18  E-value=1.8e-05  Score=62.58  Aligned_cols=81  Identities=17%  Similarity=0.177  Sum_probs=58.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+..++.+.+.+..  .+++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3578999999999999999999889999999999988877766566542   1235555423333333321  1358999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      ++++|.
T Consensus        85 v~~Ag~   90 (253)
T 1hxh_A           85 VNNAGI   90 (253)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.17  E-value=1.7e-05  Score=63.50  Aligned_cols=101  Identities=17%  Similarity=0.282  Sum_probs=70.9

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~  148 (270)
                      ....+.++++||-.|+ |. |..++.+++..  +.+|+++..+++..+.+++.   .+...-+..... ++.+.   ...
T Consensus       106 ~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~~~  179 (277)
T 1o54_A          106 MMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DISEG---FDE  179 (277)
T ss_dssp             HHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CGGGC---CSC
T ss_pred             HHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHc---ccC
Confidence            4567889999999985 44 88889999885  46999999999888887733   254211222222 22221   112


Q ss_pred             CCccEEEeCCCc--chHHHHHHccccCCEEEEEc
Q 042426          149 EGIDIYFENVGG--KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       149 ~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +.||+|+.....  ..+..+.+.|+++|+++...
T Consensus       180 ~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          180 KDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             CSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             CccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            369999986654  47889999999999998764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.17  E-value=1e-05  Score=63.72  Aligned_cols=80  Identities=20%  Similarity=0.249  Sum_probs=59.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .|.+++|+||++++|.++++.+...|++|++++++.++.+.+.++++..   ...|..+.++..+.+.+...  +++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            4679999999999999999999999999999999998887776577653   12355554233333332211  369999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++++|
T Consensus        85 v~nAg   89 (247)
T 3rwb_A           85 VNNAS   89 (247)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99998

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.16  E-value=2e-05  Score=62.54  Aligned_cols=80  Identities=23%  Similarity=0.303  Sum_probs=56.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC---ceeecCCchhHHHHHHhHcCC-C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-----GFD---DAFNYKEEPDLDAALNRCFPE-G  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~~-~  150 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++     +..   ...|..+..++.+.+.+.... +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            3578999999999999999999889999999999988766654343     211   123555543344444433222 4


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        86 id~lv~~Ag   94 (260)
T 2z1n_A           86 ADILVYSTG   94 (260)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999998

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=98.14  E-value=1.8e-05  Score=63.07  Aligned_cols=80  Identities=15%  Similarity=0.183  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKL-VGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~-~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      ++.+++|+||+|++|..+++.+.. .|++|++++++.++.+.+.+++   +..   ...|..+..++.+.+.+...  ++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            467899999999999999988877 8999999999987665544333   322   12355554233333332211  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++|+++|
T Consensus        83 id~li~~Ag   91 (276)
T 1wma_A           83 LDVLVNNAG   91 (276)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.14  E-value=1.2e-05  Score=63.30  Aligned_cols=79  Identities=10%  Similarity=0.184  Sum_probs=58.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcC--CCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFP--EGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v~d~  157 (270)
                      +.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++|.. ...|..+.+++.+.+.+...  +++|+++++
T Consensus         5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~   84 (245)
T 1uls_A            5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHY   84 (245)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            578999999999999999999999999999999988877766455632 22355554233333333211  369999999


Q ss_pred             CC
Q 042426          158 VG  159 (270)
Q Consensus       158 ~g  159 (270)
                      +|
T Consensus        85 Ag   86 (245)
T 1uls_A           85 AG   86 (245)
T ss_dssp             CC
T ss_pred             CC
Confidence            98

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.13  E-value=2e-05  Score=62.41  Aligned_cols=105  Identities=10%  Similarity=0.098  Sum_probs=70.6

Q ss_pred             CCcEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC----ceeecCCchhHHHHHHhHcC--
Q 042426           80 KGEYVYVSAASG--AVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFD----DAFNYKEEPDLDAALNRCFP--  148 (270)
Q Consensus        80 ~g~~vlI~ga~g--~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~----~vi~~~~~~~~~~~i~~~~~--  148 (270)
                      .|.+++|+||+|  |+|.+.++.+...|++|+++.++++..+.+.+   +.+..    ...|..++++..+.+.+...  
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            478999999876  89999999999999999999999877665553   33322    12355554333333333221  


Q ss_pred             CCccEEEeCCCcc---------------hH---------------HHHHHccccCCEEEEEccccc
Q 042426          149 EGIDIYFENVGGK---------------ML---------------DAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       149 ~~~d~v~d~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      |++|++++++|..               .+               +.....++.+|+++.+++...
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~  150 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGG  150 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGG
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence            3699999998721               01               223445667899999887654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.12  E-value=1.5e-05  Score=63.20  Aligned_cols=80  Identities=24%  Similarity=0.334  Sum_probs=59.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .+.+++|+||++++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+.++..+.+.+...  +++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            3578999999999999999999999999999999999888877677653   22355554233333333211  268999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++++|
T Consensus        88 i~~Ag   92 (261)
T 3n74_A           88 VNNAG   92 (261)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=98.12  E-value=3.6e-05  Score=61.29  Aligned_cols=105  Identities=17%  Similarity=0.142  Sum_probs=69.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-----C---ceeecCCchhHHHHHHhHcC--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF-----D---DAFNYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~-----~---~vi~~~~~~~~~~~i~~~~~--~  149 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++..     .   ...|..+.+++.+.+.+...  +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999998776654434321     1   12355554233333333211  3


Q ss_pred             CccEEEeCCCcc---hH---------------HHHHHcccc-----CCEEEEEccccc
Q 042426          150 GIDIYFENVGGK---ML---------------DAVLLNMRI-----CGHIAVCGMISQ  184 (270)
Q Consensus       150 ~~d~v~d~~g~~---~~---------------~~~~~~l~~-----~G~~v~~g~~~~  184 (270)
                      ++|++++++|..   .+               +..+..+..     .|+++.+++...
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  143 (267)
T 2gdz_A           86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  143 (267)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc
Confidence            689999999831   11               233444433     589999887654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=98.12  E-value=1.4e-05  Score=64.51  Aligned_cols=78  Identities=14%  Similarity=0.251  Sum_probs=59.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      +|.+++|+||+|++|.++++.+...|++|++++++.++.+.+.++++..   ...|..+..++.+.+.+.  +++|++++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~   92 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLIN   92 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence            4679999999999999999999999999999999999888777565432   223555552344444433  46999999


Q ss_pred             CCC
Q 042426          157 NVG  159 (270)
Q Consensus       157 ~~g  159 (270)
                      ++|
T Consensus        93 nAg   95 (291)
T 3rd5_A           93 NAG   95 (291)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            998

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=98.12  E-value=1e-05  Score=63.19  Aligned_cols=80  Identities=14%  Similarity=0.105  Sum_probs=58.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIYF  155 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v~  155 (270)
                      +.++||+||++++|.++++.+...|++|++++++.++.+.+.++++..   ...|..+.++..+.+.+..  .+++|+++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            468999999999999999999899999999999998888776565432   2235555423333333321  13689999


Q ss_pred             eCCCc
Q 042426          156 ENVGG  160 (270)
Q Consensus       156 d~~g~  160 (270)
                      +++|.
T Consensus        83 nnAg~   87 (235)
T 3l6e_A           83 HCAGT   87 (235)
T ss_dssp             EECCC
T ss_pred             ECCCC
Confidence            99883

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=98.11  E-value=2.8e-05  Score=62.49  Aligned_cols=105  Identities=19%  Similarity=0.256  Sum_probs=68.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---HhCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-VDLLKH---KFGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++ .+.+.+   +.+..   ...|..+..++.+.+.+...  ++
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            36789999999999999999999999999999987543 332211   33432   12354444233333332211  36


Q ss_pred             ccEEEeCCCcc--------------------------hHHHHHHccccCCEEEEEccccc
Q 042426          151 IDIYFENVGGK--------------------------MLDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       151 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      +|++++++|..                          ..+.++..++.+|+++.+++...
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  167 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  167 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence            99999999831                          11344555556799999987554

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.11  E-value=1.7e-05  Score=62.86  Aligned_cols=81  Identities=16%  Similarity=0.244  Sum_probs=59.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.++++..   ...|..+.++..+.+.+..  .+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999999999999999899999999999998887776566643   1235555423333333221  2369999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      ++++|.
T Consensus        87 v~~Ag~   92 (259)
T 4e6p_A           87 VNNAAL   92 (259)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999983

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.10  E-value=1.1e-05  Score=63.50  Aligned_cols=80  Identities=25%  Similarity=0.438  Sum_probs=59.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .|.+++|+||++++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+.++..+.+.+...  +++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4679999999999999999999999999999999998887776555432   22455554333333333221  369999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++++|
T Consensus        88 v~nAg   92 (248)
T 3op4_A           88 VNNAG   92 (248)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99998

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.10  E-value=1.5e-05  Score=63.99  Aligned_cols=100  Identities=13%  Similarity=0.069  Sum_probs=72.8

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCCc
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      .++++++++||.+|. |+.|+.++.+++..|++|+++..+++..+.+++.   .|.++ +..... +..+    ...+.|
T Consensus       117 la~l~~g~rVLDIGc-G~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~-v~~v~g-Da~~----l~d~~F  189 (298)
T 3fpf_A          117 LGRFRRGERAVFIGG-GPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDG-VNVITG-DETV----IDGLEF  189 (298)
T ss_dssp             HTTCCTTCEEEEECC-CSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCS-EEEEES-CGGG----GGGCCC
T ss_pred             HcCCCCcCEEEEECC-CccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCC-eEEEEC-chhh----CCCCCc
Confidence            468899999999996 7667777788888899999999999988888733   35532 222221 2211    112479


Q ss_pred             cEEEeCCCc----chHHHHHHccccCCEEEEEcc
Q 042426          152 DIYFENVGG----KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       152 d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      |+|+.....    ..++.+.+.|+|+|+++....
T Consensus       190 DvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          190 DVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             SEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            999976553    378899999999999997654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.10  E-value=1.8e-05  Score=63.44  Aligned_cols=105  Identities=15%  Similarity=0.221  Sum_probs=73.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .+.++||+||++++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+.++..+.+.+...  +++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999999999999999999999999999999998887776566653   12355554233333333211  369999


Q ss_pred             EeCCCcc-----------h---------------HHHHHHcccc--CCEEEEEccccc
Q 042426          155 FENVGGK-----------M---------------LDAVLLNMRI--CGHIAVCGMISQ  184 (270)
Q Consensus       155 ~d~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  184 (270)
                      ++++|..           .               .+.++..+..  +|+++.+++...
T Consensus       106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  163 (277)
T 4dqx_A          106 VNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA  163 (277)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGG
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhh
Confidence            9999831           1               2234444544  479999887654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=98.09  E-value=2.5e-05  Score=62.61  Aligned_cols=80  Identities=26%  Similarity=0.444  Sum_probs=55.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-Cc----eeecCCchhHHHHHHhHc--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF-DD----AFNYKEEPDLDAALNRCF--PE  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~----vi~~~~~~~~~~~i~~~~--~~  149 (270)
                      .+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+++   +. ..    ..|..+..++.+.+.+..  .+
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            3578999999999999999999889999999999987766554332   32 11    235555423333333221  13


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|++|+++|
T Consensus       111 ~iD~vi~~Ag  120 (279)
T 1xg5_A          111 GVDICINNAG  120 (279)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999998

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.09  E-value=1.2e-05  Score=63.43  Aligned_cols=106  Identities=21%  Similarity=0.292  Sum_probs=73.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      +|.+++|+||++|+|.+.++.+...|++|+++.+++++.+.+.+++   |..   ...|..++++....+.+...  |+.
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999998877665443   432   22355555343333333222  369


Q ss_pred             cEEEeCCCc--c---h----------------------HHHHHHcccc--CCEEEEEcccccc
Q 042426          152 DIYFENVGG--K---M----------------------LDAVLLNMRI--CGHIAVCGMISQY  185 (270)
Q Consensus       152 d~v~d~~g~--~---~----------------------~~~~~~~l~~--~G~~v~~g~~~~~  185 (270)
                      |++++++|.  .   .                      .+.++..|.+  +|++|.+++....
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~  148 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGI  148 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhc
Confidence            999999982  1   1                      2445555533  5899999876653

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.08  E-value=1.5e-05  Score=63.02  Aligned_cols=80  Identities=16%  Similarity=0.189  Sum_probs=57.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+.+++.+.+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999999999999999999999999999999988877666455432   12355554234333333221  369999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++++|
T Consensus        84 v~nAg   88 (254)
T 1hdc_A           84 VNNAG   88 (254)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.08  E-value=2.1e-05  Score=61.89  Aligned_cols=79  Identities=19%  Similarity=0.336  Sum_probs=59.1

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeecCCchhHHHHHHhHcCCCccEEE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD---AFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      .++.++||+||++++|..+++.+...|++|++++++.++.+.+.+++....   ..|..+..++.+.+.+.  +++|+++
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li   89 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDILV   89 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence            457899999999999999999999999999999999998887775665432   23444442333333332  3699999


Q ss_pred             eCCC
Q 042426          156 ENVG  159 (270)
Q Consensus       156 d~~g  159 (270)
                      +++|
T Consensus        90 ~~Ag   93 (249)
T 3f9i_A           90 CNAG   93 (249)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9998

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=98.07  E-value=1.7e-05  Score=63.46  Aligned_cols=81  Identities=19%  Similarity=0.235  Sum_probs=59.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.++++..   ...|..+.++..+.+.+...  +++|++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  106 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL  106 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999999999999999999999999999998887777676642   12355554233333332211  369999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      ++++|.
T Consensus       107 VnnAg~  112 (272)
T 4dyv_A          107 FNNAGT  112 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999883

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=98.07  E-value=3.5e-05  Score=62.61  Aligned_cols=80  Identities=18%  Similarity=0.253  Sum_probs=55.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC----ceeecCCc-hhHHH---HHHhHcC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD----DAFNYKEE-PDLDA---ALNRCFP  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~----~vi~~~~~-~~~~~---~i~~~~~  148 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.+++   +..    ...|..+. .....   .+.+.. 
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~-   89 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF-   89 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH-
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC-
Confidence            4678999999999999999999889999999999988766554343   211    12344443 23332   232222 


Q ss_pred             CCccEEEeCCCc
Q 042426          149 EGIDIYFENVGG  160 (270)
Q Consensus       149 ~~~d~v~d~~g~  160 (270)
                      +++|++++++|.
T Consensus        90 g~iD~lv~nAg~  101 (311)
T 3o26_A           90 GKLDILVNNAGV  101 (311)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            369999999983

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=98.07  E-value=6.1e-05  Score=60.14  Aligned_cols=104  Identities=16%  Similarity=0.233  Sum_probs=68.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .|.++||+||++++|.++++.+...|++|++++++ .++.+.+.++   .+..   ...|..+.+++.+.+.+...  ++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999998654 4444444323   3432   12355554233333333221  36


Q ss_pred             ccEEEeCCCcc--------------------------hHHHHHHccccCCEEEEEcccc
Q 042426          151 IDIYFENVGGK--------------------------MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       151 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +|++++++|..                          ..+.++..++.+|+++.+++..
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence            99999998831                          1234555667789999987743

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.07  E-value=1.8e-05  Score=63.52  Aligned_cols=81  Identities=22%  Similarity=0.371  Sum_probs=59.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .|.++||+||++++|.++++.+...|++|++++++.++.+.+.++++..   ...|..+.++..+.+.+...  +++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999999999999999999899999999999998887776677643   12355554233333332211  369999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      ++++|.
T Consensus       108 vnnAg~  113 (277)
T 3gvc_A          108 VANAGV  113 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=98.05  E-value=2e-05  Score=63.29  Aligned_cols=81  Identities=21%  Similarity=0.270  Sum_probs=59.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .|.++||+||++++|.++++.+...|++|++++++.++.+.+.++.+..   ...|..+..+..+.+.+...  +++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            3678999999999999999999999999999999999888777566543   12355554233333333211  369999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      ++++|.
T Consensus        84 vnnAg~   89 (281)
T 3zv4_A           84 IPNAGI   89 (281)
T ss_dssp             ECCCCC
T ss_pred             EECCCc
Confidence            999983

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.05  E-value=1.6e-05  Score=63.55  Aligned_cols=81  Identities=15%  Similarity=0.197  Sum_probs=59.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .+.+++|+||++++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+.++..+.+.+...  +++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3679999999999999999999999999999999988877776566653   23455554233333332211  369999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      ++++|.
T Consensus        90 v~nAg~   95 (271)
T 3tzq_B           90 DNNAAH   95 (271)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.04  E-value=6.2e-05  Score=63.26  Aligned_cols=92  Identities=21%  Similarity=0.178  Sum_probs=72.3

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      .-.|.+++|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|.. +.      ++.+.+.     ..|+++.|
T Consensus       217 ~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-~~G~~-v~------~Leeal~-----~ADIVi~a  282 (435)
T 3gvp_A          217 MFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQAC-MDGFR-LV------KLNEVIR-----QVDIVITC  282 (435)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHTT-----TCSEEEEC
T ss_pred             eecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-HcCCE-ec------cHHHHHh-----cCCEEEEC
Confidence            457899999997 99999999999999999999998887766665 56643 21      3433333     38999999


Q ss_pred             CCcc-hH-HHHHHccccCCEEEEEcccc
Q 042426          158 VGGK-ML-DAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       158 ~g~~-~~-~~~~~~l~~~G~~v~~g~~~  183 (270)
                      .|.. .+ ...++.|++++.++.+|...
T Consensus       283 tgt~~lI~~e~l~~MK~gailINvgrg~  310 (435)
T 3gvp_A          283 TGNKNVVTREHLDRMKNSCIVCNMGHSN  310 (435)
T ss_dssp             SSCSCSBCHHHHHHSCTTEEEEECSSTT
T ss_pred             CCCcccCCHHHHHhcCCCcEEEEecCCC
Confidence            8864 34 48899999999999998743

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.04  E-value=5.6e-05  Score=59.42  Aligned_cols=80  Identities=11%  Similarity=0.149  Sum_probs=56.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C---ceeecCCchhHHHHHHhHcC--CCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--D---DAFNYKEEPDLDAALNRCFP--EGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~---~vi~~~~~~~~~~~i~~~~~--~~~d  152 (270)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++..  .   ...|..+.+++.+.+.+...  +++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            357899999999999999999988999999999998877666545432  1   12355554233333333211  3599


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      ++++++|
T Consensus        85 ~li~~Ag   91 (251)
T 1zk4_A           85 TLVNNAG   91 (251)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=98.04  E-value=2.5e-05  Score=61.90  Aligned_cols=80  Identities=21%  Similarity=0.281  Sum_probs=58.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---C---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF---D---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~---~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .+.++||+||++++|.++++.+...|++|+++++++++.+.+.+++..   .   ...|..+.++..+.+.+...  +++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            367899999999999999999999999999999999888777655532   1   12355554233333333221  369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        85 d~lv~nAg   92 (257)
T 3imf_A           85 DILINNAA   92 (257)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=98.02  E-value=2.3e-05  Score=62.33  Aligned_cols=80  Identities=16%  Similarity=0.357  Sum_probs=57.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.+++   +..   ...|..+..+..+.+.+...  +++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999999999999999988877665444   332   12355554233333333211  369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        83 D~lVnnAG   90 (264)
T 3tfo_A           83 DVLVNNAG   90 (264)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.02  E-value=3.2e-05  Score=61.61  Aligned_cols=81  Identities=20%  Similarity=0.249  Sum_probs=57.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD---DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      .+.++||+||+|++|.++++.+...|++|+++++++++.+.+.+++    +..   ...|..+..++.+.+.+..  .++
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   99 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999999999999999988766554333    543   1235555423333333221  136


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus       100 iD~lvnnAg~  109 (267)
T 1vl8_A          100 LDTVVNAAGI  109 (267)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999883

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=98.02  E-value=3.5e-05  Score=60.65  Aligned_cols=80  Identities=25%  Similarity=0.409  Sum_probs=56.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++   +..   ...|..+.+++.+.+.+...  +++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999989999999999988776655343   332   12355554233333332211  369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        86 d~lv~nAg   93 (247)
T 2jah_A           86 DILVNNAG   93 (247)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.02  E-value=8.4e-05  Score=60.05  Aligned_cols=92  Identities=20%  Similarity=0.272  Sum_probs=71.7

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      -+|.+++|+|+ |.+|+.+++.++.+|++|++..++.++.+.+. ++|.. .++..   ++.+.+.     ..|+|+.++
T Consensus       153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~-~~~~~---~l~~~l~-----~aDvVi~~~  221 (293)
T 3d4o_A          153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGME-PFHIS---KAAQELR-----DVDVCINTI  221 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTSE-EEEGG---GHHHHTT-----TCSEEEECC
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCCe-ecChh---hHHHHhc-----CCCEEEECC
Confidence            46889999997 99999999999999999999999988877776 77764 23221   3433332     389999999


Q ss_pred             Ccch-HHHHHHccccCCEEEEEcc
Q 042426          159 GGKM-LDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       159 g~~~-~~~~~~~l~~~G~~v~~g~  181 (270)
                      .... -...++.+++++.++.++.
T Consensus       222 p~~~i~~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          222 PALVVTANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             SSCCBCHHHHHHSCTTCEEEECSS
T ss_pred             ChHHhCHHHHHhcCCCCEEEEecC
Confidence            7543 3467788999999999876

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.01  E-value=6.2e-05  Score=58.93  Aligned_cols=78  Identities=21%  Similarity=0.247  Sum_probs=56.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce--eecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA--FNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      ++.+++|+||+|++|.++++.+...|++|+++++++++.+.+.++..-..+  .|..+..++.+.+.  ..+++|+++++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~   83 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG--SVGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT--TCCCCCEEEEC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHH--HcCCCCEEEEC
Confidence            467899999999999999999999999999999998887766534422122  34444423333332  11368999999


Q ss_pred             CC
Q 042426          158 VG  159 (270)
Q Consensus       158 ~g  159 (270)
                      +|
T Consensus        84 Ag   85 (244)
T 3d3w_A           84 AA   85 (244)
T ss_dssp             CC
T ss_pred             Cc
Confidence            98

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=98.01  E-value=1.4e-05  Score=64.30  Aligned_cols=81  Identities=19%  Similarity=0.256  Sum_probs=56.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG----FD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g----~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .|.++||+||++++|.++++.+...|++|+++++++++.+.+.+++.    ..   ...|..+.++..+.+.+...  ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999887766654432    11   12355554333333333211  36


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus       112 iD~lvnnAG~  121 (281)
T 4dry_A          112 LDLLVNNAGS  121 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999999983

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=98.01  E-value=3.5e-05  Score=61.38  Aligned_cols=80  Identities=16%  Similarity=0.231  Sum_probs=56.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC---ceeecCCchhHHHHHHhHcC--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-----GFD---DAFNYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~--~  149 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++     +..   ...|..+.+++.+.+.+...  +
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999889999999999988766554333     332   12355554233333333211  3


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|++++++|
T Consensus        92 ~id~lv~nAg  101 (267)
T 1iy8_A           92 RIDGFFNNAG  101 (267)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=98.00  E-value=3.5e-05  Score=62.53  Aligned_cols=80  Identities=19%  Similarity=0.326  Sum_probs=58.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++   +..   ...|..+.+++.+.+.+...  +++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV  109 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            5689999999999999999999999999999999998877665443   332   22455554234333333211  369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus       110 d~lvnnAg  117 (301)
T 3tjr_A          110 DVVFSNAG  117 (301)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.00  E-value=3.7e-05  Score=61.02  Aligned_cols=80  Identities=20%  Similarity=0.314  Sum_probs=56.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      ++.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++    +..   ...|..+.+++.+.+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999889999999999988766554333    432   12355554233333332211  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        86 id~lv~~Ag   94 (263)
T 3ai3_A           86 ADILVNNAG   94 (263)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999997

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=98.00  E-value=9e-05  Score=62.47  Aligned_cols=93  Identities=20%  Similarity=0.152  Sum_probs=72.5

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      ..-.|.+++|.|. |.+|+.+++.++.+|++|+++.+++.+...+. ..|.. +.      ++.+.+.+     .|+++.
T Consensus       243 ~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-~~G~~-vv------~LeElL~~-----ADIVv~  308 (464)
T 3n58_A          243 VMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAA-MDGFE-VV------TLDDAAST-----ADIVVT  308 (464)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCE-EC------CHHHHGGG-----CSEEEE
T ss_pred             CcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-hcCce-ec------cHHHHHhh-----CCEEEE
Confidence            3457899999997 99999999999999999999998877655554 55653 22      34444433     899999


Q ss_pred             CCCcc-h-HHHHHHccccCCEEEEEcccc
Q 042426          157 NVGGK-M-LDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       157 ~~g~~-~-~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +.+.. . -...+..|++++.++.+|..+
T Consensus       309 atgt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          309 TTGNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             CCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             CCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence            99875 3 368899999999999988743

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=98.00  E-value=5.2e-05  Score=60.82  Aligned_cols=79  Identities=20%  Similarity=0.159  Sum_probs=59.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC-CCccEEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP-EGIDIYF  155 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~-~~~d~v~  155 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.++++..   ...|..+.++..+.+.+... +++|+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            3678999999999999999999889999999999999888877677653   22355555344444444411 2689999


Q ss_pred             eCC
Q 042426          156 ENV  158 (270)
Q Consensus       156 d~~  158 (270)
                      .+.
T Consensus       109 ~~a  111 (281)
T 3ppi_A          109 VAH  111 (281)
T ss_dssp             ECC
T ss_pred             Ecc
Confidence            883

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.00  E-value=3.5e-05  Score=60.52  Aligned_cols=103  Identities=11%  Similarity=-0.020  Sum_probs=71.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcC--CCccEEEeC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFP--EGIDIYFEN  157 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--~~~d~v~d~  157 (270)
                      .++||+||++++|.+.++.+...|++|+++.+++++.+.+.++.+-.  ...|..++.+..+.+.+...  |++|+++++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN   82 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN   82 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            57999999999999999999999999999999998888777343321  22355554233333333222  369999999


Q ss_pred             CCcc-----------h---------------HHHHHHcc-ccCCEEEEEccccc
Q 042426          158 VGGK-----------M---------------LDAVLLNM-RICGHIAVCGMISQ  184 (270)
Q Consensus       158 ~g~~-----------~---------------~~~~~~~l-~~~G~~v~~g~~~~  184 (270)
                      +|..           .               .+.++..| +.+|+++.+++...
T Consensus        83 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~  136 (247)
T 3ged_A           83 ACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA  136 (247)
T ss_dssp             CCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            9731           1               13344444 35699999887654

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.99  E-value=4e-05  Score=61.39  Aligned_cols=80  Identities=19%  Similarity=0.330  Sum_probs=56.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++.+.+.+..  .+++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            3578999999999999999999999999999999988766554333   432   1235555423333333221  2369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus       101 D~lv~~Ag  108 (277)
T 2rhc_B          101 DVLVNNAG  108 (277)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999997

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.99  E-value=5.5e-05  Score=60.79  Aligned_cols=104  Identities=13%  Similarity=0.163  Sum_probs=68.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCC---ceeecCCchhHHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS------------KEKVDLLKH---KFGFD---DAFNYKEEPDLDA  141 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~------------~~~~~~~~~---~~g~~---~vi~~~~~~~~~~  141 (270)
                      .|.++||+||++++|.++++.+...|++|++++++            .++.+.+.+   ..+..   ...|..+..+..+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            36799999999999999999999999999999876            555444432   23332   1235555423333


Q ss_pred             HHHhHcC--CCccEEEeCCCcc---------h---------------HHHHHHccccCCEEEEEcccc
Q 042426          142 ALNRCFP--EGIDIYFENVGGK---------M---------------LDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       142 ~i~~~~~--~~~d~v~d~~g~~---------~---------------~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      .+.+...  +++|++++++|..         .               .+.++..+..+|+++.+++..
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  156 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA  156 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence            3333221  3699999998831         1               233444566789999987744

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.98  E-value=4.9e-05  Score=60.24  Aligned_cols=105  Identities=16%  Similarity=0.154  Sum_probs=67.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.++||+||++++|.++++.+...|++|++++ ++.+..+.+.++   .+..   ...|..+..+..+.+.+...  ++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            367999999999999999999999999999984 444444433323   2332   12355554233333333221  36


Q ss_pred             ccEEEeCCCcc------------h---------------HHHHHHccccCCEEEEEccccc
Q 042426          151 IDIYFENVGGK------------M---------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       151 ~d~v~d~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      +|++++++|..            .               .+.++..+.++|+++.+++...
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~  147 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAG  147 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHh
Confidence            99999998731            0               1234445566789999887544

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.98  E-value=7.1e-05  Score=60.40  Aligned_cols=105  Identities=17%  Similarity=0.210  Sum_probs=68.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---HhCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-VDLLKH---KFGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .|.++||+||++++|.++++.+...|++|++++++.++ .+.+.+   +.+..   ...|..+..+..+.+.+...  ++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999987553 333321   33432   12355554233333333211  36


Q ss_pred             ccEEEeCCCcc---------------------------hHHHHHHccccCCEEEEEccccc
Q 042426          151 IDIYFENVGGK---------------------------MLDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       151 ~d~v~d~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      +|++++++|..                           ..+.++..++.+|+++.+++...
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~  186 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVA  186 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHH
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHh
Confidence            99999998731                           02344556667899999877543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.98  E-value=3.2e-05  Score=61.40  Aligned_cols=80  Identities=16%  Similarity=0.207  Sum_probs=57.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+.+++.+.+.+...  +++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999999999999999999889999999999988877665444321   12355554233333332211  369999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++++|
T Consensus        86 v~~Ag   90 (260)
T 1nff_A           86 VNNAG   90 (260)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.98  E-value=4.3e-05  Score=60.15  Aligned_cols=77  Identities=22%  Similarity=0.374  Sum_probs=57.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEEEeC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIYFEN  157 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v~d~  157 (270)
                      +++|+||++++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+.+++.+.+.+...  +++|+++++
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn   81 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN   81 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            6899999999999999999889999999999988887776566532   12355555344444444332  369999999


Q ss_pred             CC
Q 042426          158 VG  159 (270)
Q Consensus       158 ~g  159 (270)
                      +|
T Consensus        82 Ag   83 (248)
T 3asu_A           82 AG   83 (248)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.97  E-value=7.1e-05  Score=59.68  Aligned_cols=104  Identities=16%  Similarity=0.256  Sum_probs=69.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .|.++||+||++++|.++++.+...|++|+++.+ +.+..+.+.++   .+..   ...|..+..+..+.+.+...  ++
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999999765 44444444322   3432   12355554233333333221  36


Q ss_pred             ccEEEeCCCcc--------------------------hHHHHHHccccCCEEEEEcccc
Q 042426          151 IDIYFENVGGK--------------------------MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       151 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +|++++++|..                          ..+.++..+.++|+++.+++..
T Consensus        97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            89999998831                          1244566777789999988754

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.97  E-value=1.5e-05  Score=63.11  Aligned_cols=80  Identities=20%  Similarity=0.195  Sum_probs=50.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .+.++||+||++++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+..+..+.+.+...  +++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999999999999999999999999999999887776665455542   12355554233333333211  369999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++++|
T Consensus        86 v~nAg   90 (257)
T 3tpc_A           86 VNCAG   90 (257)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.97  E-value=6.5e-05  Score=57.89  Aligned_cols=97  Identities=9%  Similarity=0.109  Sum_probs=65.8

Q ss_pred             cEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHH-HHHHHHHHhCCC-c--eeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           82 EYVYVSAASGAVGQLVGQFVK-LVGCYVVGSARSKE-KVDLLKHKFGFD-D--AFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~-~~g~~v~~~~~~~~-~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      .+|+|+||+|++|..+++.+. ..|++|++++++++ +.+.+. ..+.. .  ..|..+..++.+.+.     ++|++++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~-----~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNPGXLEQAVT-----NAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCHHHHHHHHT-----TCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCHHHHHHHHc-----CCCEEEE
Confidence            469999999999999998887 89999999999988 666553 22322 1  234444423333332     4899999


Q ss_pred             CCCcch--HHHHHHccccC--CEEEEEccccc
Q 042426          157 NVGGKM--LDAVLLNMRIC--GHIAVCGMISQ  184 (270)
Q Consensus       157 ~~g~~~--~~~~~~~l~~~--G~~v~~g~~~~  184 (270)
                      ++|...  ....++.++..  ++++.++....
T Consensus        80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           80 GAMESGSDMASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             cCCCCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence            998632  44455555443  58998876543

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.97  E-value=6e-05  Score=60.20  Aligned_cols=81  Identities=19%  Similarity=0.322  Sum_probs=57.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHH---HHHhHcCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDA---ALNRCFPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~---~i~~~~~~~  150 (270)
                      .+.+++|+||++++|.++++.+...|++|+++++++++.+.+.+++   +..   ...|..+.++..+   .+.+..+++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999999999988766554333   332   1235555423333   333333357


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus       100 id~lv~nAg~  109 (273)
T 1ae1_A          100 LNILVNNAGV  109 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999983

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.97  E-value=4.1e-05  Score=60.78  Aligned_cols=80  Identities=16%  Similarity=0.253  Sum_probs=57.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      .+.++||+||+|++|.++++.+...|++|+++++++++.+.+.+++...   ...|..+..++.+.+.+..  .+++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999999999999999999999999999999988877665444321   1235555423333333221  1369999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++++|
T Consensus        91 v~~Ag   95 (263)
T 3ak4_A           91 CANAG   95 (263)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.97  E-value=4.3e-05  Score=61.31  Aligned_cols=81  Identities=21%  Similarity=0.340  Sum_probs=56.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.+++   +..   ...|..+..+..+.+.+...  +++
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI  102 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999889999999999988776665444   332   12355554233333333211  369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus       103 d~lv~nAg~  111 (279)
T 3sju_A          103 GILVNSAGR  111 (279)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            999999983

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.96  E-value=5.5e-05  Score=59.40  Aligned_cols=80  Identities=24%  Similarity=0.323  Sum_probs=57.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +.+++|+||++++|..+++.+...|++|+++++++++.+.+.+++   +..   ...|..+..+..+.+.+..  .+++|
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (247)
T 3lyl_A            5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAID   84 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999889999999999988776655333   432   1235555423443333322  23699


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      ++++++|.
T Consensus        85 ~li~~Ag~   92 (247)
T 3lyl_A           85 ILVNNAGI   92 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999983

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.96  E-value=4.8e-05  Score=61.18  Aligned_cols=81  Identities=15%  Similarity=0.172  Sum_probs=58.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---C---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF---D---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~---~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      ++.++||+||++++|.++++.+...|++|++++++.++.+.+.+++..   .   ...|..+..+..+.+.+...  +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            467899999999999999999999999999999998887776655432   1   12355554233333333211  369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus       107 D~lVnnAg~  115 (283)
T 3v8b_A          107 DIVVANAGI  115 (283)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.96  E-value=2.7e-05  Score=62.52  Aligned_cols=80  Identities=20%  Similarity=0.315  Sum_probs=58.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.++++..   ...|..+..++.+.+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            3578999999999999999999999999999999988877776455542   12355554233333333211  369999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++++|
T Consensus        84 v~~Ag   88 (281)
T 3m1a_A           84 VNNAG   88 (281)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99998

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.96  E-value=6.7e-05  Score=59.63  Aligned_cols=105  Identities=8%  Similarity=0.065  Sum_probs=68.2

Q ss_pred             CCcEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCC----ceeecCCchhHHHHHHhHcC--
Q 042426           80 KGEYVYVSAASG--AVGQLVGQFVKLVGCYVVGSARSKEKVDLLK---HKFGFD----DAFNYKEEPDLDAALNRCFP--  148 (270)
Q Consensus        80 ~g~~vlI~ga~g--~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~---~~~g~~----~vi~~~~~~~~~~~i~~~~~--  148 (270)
                      .+.+++|+||+|  |+|.++++.+...|++|+++.++++..+.+.   ++.+..    ...|..+.+++.+.+.+...  
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            367899999994  5999999999889999999998865444433   233321    12355554244433333221  


Q ss_pred             CCccEEEeCCCcc------------------------------hHHHHHHccccCCEEEEEccccc
Q 042426          149 EGIDIYFENVGGK------------------------------MLDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       149 ~~~d~v~d~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      +++|++++++|..                              ..+.++..++++|+++.+++...
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  151 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG  151 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence            3689999998731                              11234445666899999887554

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.95  E-value=3.1e-05  Score=61.48  Aligned_cols=80  Identities=16%  Similarity=0.165  Sum_probs=57.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      .+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.++++..   ...|..+..++.+.+.+..  .+++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            3578999999999999999999999999999999887776665466543   1235555423333333221  1369999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++++|
T Consensus        91 i~~Ag   95 (265)
T 2o23_A           91 VNCAG   95 (265)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.95  E-value=4.7e-05  Score=60.03  Aligned_cols=81  Identities=16%  Similarity=0.234  Sum_probs=57.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----C-CC---ceeecCCchhHHHHHHhHcC--
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-----G-FD---DAFNYKEEPDLDAALNRCFP--  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~-----g-~~---~vi~~~~~~~~~~~i~~~~~--  148 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.+++     + ..   ...|..+.++..+.+.+...  
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            3578999999999999999998888999999999988776665333     2 11   12355554233333333211  


Q ss_pred             CCccEEEeCCCc
Q 042426          149 EGIDIYFENVGG  160 (270)
Q Consensus       149 ~~~d~v~d~~g~  160 (270)
                      +++|++++++|.
T Consensus        86 g~iD~lvnnAg~   97 (250)
T 3nyw_A           86 GAVDILVNAAAM   97 (250)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            369999999984

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.94  E-value=3.4e-05  Score=61.31  Aligned_cols=80  Identities=23%  Similarity=0.346  Sum_probs=56.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC----ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD----DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~----~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .|.+++|+||++++|.++++.+...|++|++++++.++.+.+.+++   +..    ...|..+..+..+.+.+...  ++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            3679999999999999999999999999999999988776655343   211    12355554233333332211  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        89 id~lvnnAg   97 (262)
T 3pk0_A           89 IDVVCANAG   97 (262)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999998

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.94  E-value=4.8e-05  Score=59.95  Aligned_cols=81  Identities=20%  Similarity=0.262  Sum_probs=57.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.+++   +..   ...|..+..+..+.+.+...  +++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999999999988877665443   321   12355554233333332211  369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999874

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.94  E-value=3.6e-05  Score=61.83  Aligned_cols=80  Identities=24%  Similarity=0.305  Sum_probs=57.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---C---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF---D---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~---~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .|.++||+||++++|.++++.+...|++|++++++.++.+.+.+++..   .   ...|..+.++....+.+...  +++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999999887777655532   1   12355554233333332211  369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        87 D~lvnnAg   94 (280)
T 3tox_A           87 DTAFNNAG   94 (280)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.94  E-value=3.7e-05  Score=61.25  Aligned_cols=104  Identities=16%  Similarity=0.179  Sum_probs=67.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.++||+||++++|.++++.+...|++|++++ ++.+..+.+.++   .+..   ...|..+.++..+.+.+...  ++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999998888899999874 444444444322   3332   12355554233333332211  36


Q ss_pred             ccEEEeCCCcc--------------------------hHHHHHHccccCCEEEEEcccc
Q 042426          151 IDIYFENVGGK--------------------------MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       151 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +|++++++|..                          .++.++..++.+|+++.+++..
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~  164 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQ  164 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChh
Confidence            99999999831                          0234555666789999987644

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.94  E-value=4.3e-05  Score=60.67  Aligned_cols=81  Identities=22%  Similarity=0.319  Sum_probs=57.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+++   +..   ...|..+.+++.+.+.+..  .+.+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  107 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC  107 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999999889999999999988876665343   322   2235555423333333321  1369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus       108 d~lv~~Ag~  116 (262)
T 3rkr_A          108 DVLVNNAGV  116 (262)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999884

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.93  E-value=5.5e-05  Score=58.76  Aligned_cols=76  Identities=12%  Similarity=0.200  Sum_probs=56.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      ++||+||++++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+.++..+.+.+ ....+|++++++|
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-~~~~~d~lv~~Ag   81 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQ-LDSIPSTVVHSAG   81 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHS-CSSCCSEEEECCC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHH-HhhcCCEEEEeCC
Confidence            5899999999999999999999999999999999888877566432   22355555233333333 3334599999998

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.93  E-value=5.8e-05  Score=59.89  Aligned_cols=80  Identities=18%  Similarity=0.280  Sum_probs=56.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++...+.+...  +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            3678999999999999999999999999999999988776654343   322   12355554233333332211  369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        86 d~lv~nAg   93 (262)
T 1zem_A           86 DFLFNNAG   93 (262)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.93  E-value=3.4e-05  Score=60.90  Aligned_cols=79  Identities=20%  Similarity=0.275  Sum_probs=57.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHH---HHHHhHcCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLD---AALNRCFPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~---~~i~~~~~~~  150 (270)
                      .+.+++|+||++++|.++++.+...|++|++++++.++.+.+.+++   +..   ...|..+.++..   +.+.+.  ++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g~   83 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--AP   83 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--CC
Confidence            4678999999999999999999999999999999988766655343   332   223555542333   333333  56


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus        84 id~lv~nAg~   93 (252)
T 3h7a_A           84 LEVTIFNVGA   93 (252)
T ss_dssp             EEEEEECCCC
T ss_pred             ceEEEECCCc
Confidence            9999999983

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.93  E-value=7e-05  Score=59.33  Aligned_cols=80  Identities=16%  Similarity=0.312  Sum_probs=56.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHH---HhHcCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAAL---NRCFPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i---~~~~~~~  150 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++   +..   ...|..+.++..+.+   .+...++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999889999999999988766554333   322   123555542333333   3333256


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        88 id~lv~~Ag   96 (260)
T 2ae2_A           88 LNILVNNAG   96 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999998

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.93  E-value=5e-05  Score=60.75  Aligned_cols=80  Identities=11%  Similarity=0.124  Sum_probs=54.4

Q ss_pred             CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCC--ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSKE---KVDLLKHKFGFD--DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~~---~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      .+.+++|+||+  |++|.++++.+...|++|++++++++   ..+.+.++.+..  ...|..+..+..+.+.+..  .++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999998  99999999999889999999998764   444444333422  1235555423333333221  236


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        85 id~lv~nAg   93 (275)
T 2pd4_A           85 LDFIVHSVA   93 (275)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.92  E-value=5.8e-05  Score=59.55  Aligned_cols=81  Identities=17%  Similarity=0.181  Sum_probs=56.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----C--CC-ceeec--CCchhHHHHHHhHc--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----G--FD-DAFNY--KEEPDLDAALNRCF--P  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g--~~-~vi~~--~~~~~~~~~i~~~~--~  148 (270)
                      .+.+++|+||++++|.++++.+...|++|+++++++++.+.+.+++    +  .. ...|.  .+..+..+.+.+..  .
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY   90 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence            4679999999999999999999999999999999988776655333    2  11 12344  33323333333221  2


Q ss_pred             CCccEEEeCCCc
Q 042426          149 EGIDIYFENVGG  160 (270)
Q Consensus       149 ~~~d~v~d~~g~  160 (270)
                      +++|++++++|.
T Consensus        91 g~id~lv~nAg~  102 (252)
T 3f1l_A           91 PRLDGVLHNAGL  102 (252)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            369999999983

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.92  E-value=6.2e-05  Score=59.82  Aligned_cols=81  Identities=15%  Similarity=0.217  Sum_probs=57.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.++||+|+++++|.++++.+...|++|++++++.++.+.+.+++   +..   ...|..+..+..+.+.+..  .+++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   89 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRV   89 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5689999999999999999999999999999999988776665443   322   1235555423333333321  1369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus        90 d~lv~nAg~   98 (264)
T 3ucx_A           90 DVVINNAFR   98 (264)
T ss_dssp             SEEEECCCS
T ss_pred             cEEEECCCC
Confidence            999999863

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.92  E-value=5.5e-05  Score=59.44  Aligned_cols=79  Identities=20%  Similarity=0.304  Sum_probs=55.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      +.+++|+||+|++|.++++.+...|++|+++++ ++++.+.+.+++   +..   ...|..+.+++.+.+.+...  +++
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   83 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQV   83 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999998 776665544333   432   12355554234333333211  369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        84 d~lv~nAg   91 (246)
T 2uvd_A           84 DILVNNAG   91 (246)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.92  E-value=4.7e-05  Score=60.68  Aligned_cols=80  Identities=11%  Similarity=0.226  Sum_probs=55.6

Q ss_pred             CCcEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHhCCC---ceeecCCchhHHHHHH---hHcC--
Q 042426           80 KGEYVYVSAA--SGAVGQLVGQFVKLVGCYVVGSARSKEK-VDLLKHKFGFD---DAFNYKEEPDLDAALN---RCFP--  148 (270)
Q Consensus        80 ~g~~vlI~ga--~g~vG~~ai~la~~~g~~v~~~~~~~~~-~~~~~~~~g~~---~vi~~~~~~~~~~~i~---~~~~--  148 (270)
                      .+.+++|+|+  ++++|.++++.+...|++|+++++++++ .+.+.++++..   ...|..+.++..+.+.   +..+  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            3678999998  8999999999999999999999988765 35555455432   1235555423333333   2222  


Q ss_pred             CCccEEEeCCC
Q 042426          149 EGIDIYFENVG  159 (270)
Q Consensus       149 ~~~d~v~d~~g  159 (270)
                      +++|++++++|
T Consensus        86 ~~iD~lv~nAg   96 (269)
T 2h7i_A           86 NKLDGVVHSIG   96 (269)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCceEEEECCc
Confidence            16999999987

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.91  E-value=4.9e-05  Score=59.86  Aligned_cols=80  Identities=15%  Similarity=0.208  Sum_probs=57.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc----eeecCCchhHHHHHHhHc-CCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD----AFNYKEEPDLDAALNRCF-PEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~----vi~~~~~~~~~~~i~~~~-~~~~d~v  154 (270)
                      .+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++++...    ..|..+..++.+.+.+.. .+++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            35789999999999999999998899999999999888776654554321    235555423333332211 1369999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++++|
T Consensus        90 i~~Ag   94 (254)
T 2wsb_A           90 VNSAG   94 (254)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.91  E-value=5.7e-05  Score=60.50  Aligned_cols=80  Identities=19%  Similarity=0.343  Sum_probs=56.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .|.+++|+||++++|.++++.+...|++|++++++.++.+.+.+++    +..   ...|..+..+..+.+.+...  ++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  105 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGR  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999987765544333    432   12355554233333333211  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus       106 id~lv~nAg  114 (277)
T 4fc7_A          106 IDILINCAA  114 (277)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999998

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.91  E-value=2.9e-05  Score=60.03  Aligned_cols=89  Identities=10%  Similarity=0.099  Sum_probs=62.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .+.+++|+||++++|.+.++.+...|++|++++++.+              .|..+.++..+.+.+.  +++|++++++|
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~--g~id~lv~nAg   68 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETI--GAFDHLIVTAG   68 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHH--CSEEEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            3578999999999999999998888999999987643              3444442344444433  45899999887


Q ss_pred             cc---------------------------hHHHHHHccccCCEEEEEccccc
Q 042426          160 GK---------------------------MLDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       160 ~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      ..                           ..+.++..++++|+++.+++...
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  120 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS  120 (223)
T ss_dssp             CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh
Confidence            31                           12334456667899999887654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.91  E-value=3.5e-05  Score=63.08  Aligned_cols=80  Identities=16%  Similarity=0.232  Sum_probs=57.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--C---ceeecCCchhHHHHHHhHc--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF--D---DAFNYKEEPDLDAALNRCF--PE  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~--~---~vi~~~~~~~~~~~i~~~~--~~  149 (270)
                      .+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+++   +.  .   ...|..+..++.+.+.+..  .+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            3678999999999999999999889999999999998776665333   32  1   2235555433443333321  13


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|++++++|
T Consensus        87 ~id~lv~nAg   96 (319)
T 3ioy_A           87 PVSILCNNAG   96 (319)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999998

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.91  E-value=5.6e-05  Score=60.33  Aligned_cols=80  Identities=16%  Similarity=0.180  Sum_probs=57.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHc--CCCccEEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCF--PEGIDIYF  155 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~--~~~~d~v~  155 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++...  ...|..+..++.+.+.+..  .+++|+++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4678999999999999999999999999999999988877766454321  1235555423333333221  13699999


Q ss_pred             eCCC
Q 042426          156 ENVG  159 (270)
Q Consensus       156 d~~g  159 (270)
                      +++|
T Consensus        88 ~nAg   91 (270)
T 1yde_A           88 NNAG   91 (270)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.91  E-value=3.9e-05  Score=62.03  Aligned_cols=80  Identities=16%  Similarity=0.253  Sum_probs=57.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---C----ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF---D----DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~---~----~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.+++..   .    ...|..+..+..+.+.+...  ++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999999999998877666545432   1    12355554233333332211  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus       120 iD~lvnnAg  128 (293)
T 3rih_A          120 LDVVCANAG  128 (293)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.91  E-value=4.3e-05  Score=61.23  Aligned_cols=81  Identities=21%  Similarity=0.280  Sum_probs=57.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.+++   +..   ...|..+..+..+.+.+...  +++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3679999999999999999999999999999999887766655343   322   12355554233333333211  369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus       111 D~lvnnAg~  119 (276)
T 3r1i_A          111 DIAVCNAGI  119 (276)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.91  E-value=5.4e-05  Score=60.27  Aligned_cols=80  Identities=23%  Similarity=0.371  Sum_probs=56.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK----FGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.++    .+..   ...|..+.++..+.+.+...  ++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            367899999999999999999999999999999998877665433    3432   12355554233333332211  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        99 id~lv~nAg  107 (266)
T 4egf_A           99 LDVLVNNAG  107 (266)
T ss_dssp             CSEEEEECC
T ss_pred             CCEEEECCC
Confidence            999999988

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.90  E-value=5.6e-05  Score=59.79  Aligned_cols=81  Identities=19%  Similarity=0.281  Sum_probs=56.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .+.+++|+||++++|.++++.+...|++|++++++.++.+.+.+++   +..   ...|..+.++..+.+.+...  +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999988888999999999988776655333   332   12355554233333332211  369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus        91 d~lv~nAg~   99 (256)
T 3gaf_A           91 TVLVNNAGG   99 (256)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.90  E-value=7e-05  Score=59.21  Aligned_cols=79  Identities=15%  Similarity=0.198  Sum_probs=55.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++   +..   ...|..+.+++.+.+.+..  .+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999999999988766554333   322   1235555423333333221  23699


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      ++++++|
T Consensus        82 ~lv~nAg   88 (256)
T 1geg_A           82 VIVNNAG   88 (256)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.90  E-value=6.4e-05  Score=60.20  Aligned_cols=80  Identities=21%  Similarity=0.231  Sum_probs=56.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--D---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++..  .   ...|..+.+++.+.+.+..  .+++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            367899999999999999999999999999999998877665545432  1   1235555423333333221  23699


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      ++++++|
T Consensus       108 ~lvnnAg  114 (276)
T 2b4q_A          108 ILVNNAG  114 (276)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999998

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.89  E-value=7.5e-05  Score=59.61  Aligned_cols=80  Identities=18%  Similarity=0.214  Sum_probs=56.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +..   ...|..+.+++.+.+.+..  .+++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            3678999999999999999999989999999999988766554333   332   1235555423333333221  2369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus       110 D~li~~Ag  117 (272)
T 1yb1_A          110 SILVNNAG  117 (272)
T ss_dssp             SEEEECCC
T ss_pred             cEEEECCC
Confidence            99999997

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.89  E-value=0.00012  Score=59.15  Aligned_cols=105  Identities=11%  Similarity=0.050  Sum_probs=69.1

Q ss_pred             CCcEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCc--eeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASG--AVGQLVGQFVKLVGCYVVGSARSKEKVDLLK---HKFGFDD--AFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g--~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~---~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.++||+||+|  ++|.++++.+...|++|++++++++..+.+.   ++.+...  ..|..+.++..+.+.+...  ++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467999999987  9999999999899999999998875443333   2344322  2355554233333333221  36


Q ss_pred             ccEEEeCCCcc---------------h---------------HHHHHHccccCCEEEEEccccc
Q 042426          151 IDIYFENVGGK---------------M---------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       151 ~d~v~d~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      +|++++++|..               .               .+.++..+..+|+++.+++...
T Consensus       109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~  172 (296)
T 3k31_A          109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA  172 (296)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence            99999999731               0               1234445566899999887554

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.89  E-value=4.7e-05  Score=60.83  Aligned_cols=80  Identities=23%  Similarity=0.365  Sum_probs=57.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .|.++||+||++++|.++++.+...|++|++++++.++.+.+.+++   +..   ...|..+..+..+.+.+..  .+++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            3679999999999999999999999999999999988776655343   332   1235555423333333221  2369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus       105 D~lv~nAg  112 (271)
T 4ibo_A          105 DILVNNAG  112 (271)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.89  E-value=6.1e-05  Score=60.13  Aligned_cols=80  Identities=19%  Similarity=0.397  Sum_probs=56.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .+.++||+||++++|.++++.+...|++|+++++++++.+.+.+++   +..   ...|..+..+..+.+.+...  +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999999999999999999988776554332   332   22455554233333333211  369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus       107 D~lvnnAg  114 (270)
T 3ftp_A          107 NVLVNNAG  114 (270)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.89  E-value=7.7e-05  Score=58.96  Aligned_cols=80  Identities=13%  Similarity=0.179  Sum_probs=55.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +..   ...|..+.+++.+.+.+...  +++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999889999999999887665443232   332   12355554234333333211  369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        92 d~vi~~Ag   99 (260)
T 3awd_A           92 DILVACAG   99 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.89  E-value=0.00014  Score=58.84  Aligned_cols=105  Identities=14%  Similarity=0.111  Sum_probs=68.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHcC--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK--EKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~--~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~  149 (270)
                      .+.++||+||++++|.++++.+...|++|+++.++.  +..+.+.+   +.+..   ...|..+..+..+.+.+...  +
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999988762  33333321   33432   12355554233333332211  3


Q ss_pred             CccEEEeCCCcc----h-----------------------HHHHHHccccCCEEEEEccccc
Q 042426          150 GIDIYFENVGGK----M-----------------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       150 ~~d~v~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      ++|++++++|..    .                       .+.++..+.++|+++.+++...
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~  189 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence            699999998831    0                       2334456667899999987654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.89  E-value=0.00011  Score=59.50  Aligned_cols=92  Identities=23%  Similarity=0.309  Sum_probs=71.4

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      -.|.+++|+|+ |.+|..+++.++.+|++|++..++.++.+.+. ++|.. .+++  . ++.+.+.     +.|+|+.++
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~-~~~~--~-~l~~~l~-----~aDvVi~~~  223 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT-EMGLV-PFHT--D-ELKEHVK-----DIDICINTI  223 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCE-EEEG--G-GHHHHST-----TCSEEEECC
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCCe-EEch--h-hHHHHhh-----CCCEEEECC
Confidence            45789999997 99999999999999999999999988877776 66753 3322  1 3433332     489999999


Q ss_pred             CcchH-HHHHHccccCCEEEEEcc
Q 042426          159 GGKML-DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       159 g~~~~-~~~~~~l~~~G~~v~~g~  181 (270)
                      ....+ ...++.+++++.++.++.
T Consensus       224 p~~~i~~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          224 PSMILNQTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             SSCCBCHHHHTTSCTTCEEEECSS
T ss_pred             ChhhhCHHHHHhCCCCCEEEEEeC
Confidence            86433 457788999999999876

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.89  E-value=1.1e-05  Score=63.15  Aligned_cols=102  Identities=15%  Similarity=0.199  Sum_probs=70.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF-DDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +|.+++|+|+++++|.+.++.+...|++|+++.+++++.+... .-.. ....|..++++..+.+.+ . |++|++++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~-~-g~iDiLVNNA   86 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-HPRIRREELDITDSQRLQRLFEA-L-PRLDVLVNNA   86 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-CTTEEEEECCTTCHHHHHHHHHH-C-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-cCCeEEEEecCCCHHHHHHHHHh-c-CCCCEEEECC
Confidence            5899999999999999999999999999999998876654332 1111 123455555344444433 2 4699999999


Q ss_pred             Ccc---------h---------------HHHHHHccc-cCCEEEEEccccc
Q 042426          159 GGK---------M---------------LDAVLLNMR-ICGHIAVCGMISQ  184 (270)
Q Consensus       159 g~~---------~---------------~~~~~~~l~-~~G~~v~~g~~~~  184 (270)
                      |..         .               .+.++..|+ .+|++|.+++...
T Consensus        87 Gi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  137 (242)
T 4b79_A           87 GISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS  137 (242)
T ss_dssp             CCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred             CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence            831         1               234455564 4799999988664

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.89  E-value=6.4e-05  Score=59.69  Aligned_cols=104  Identities=16%  Similarity=0.211  Sum_probs=67.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK---EKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~---~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--  148 (270)
                      .+.++||+||++++|.++++.+...|++|+++.++.   ++.+.+.+++   +..   ...|..+.++..+.+.+...  
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            367899999999999999999999999999987653   3444333233   322   12355554233333332211  


Q ss_pred             CCccEEEeCCCcc-----------h---------------HHHHHHccccCCEEEEEcccc
Q 042426          149 EGIDIYFENVGGK-----------M---------------LDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       149 ~~~d~v~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +++|++++++|..           .               .+.++..++.+|+++.+++..
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~  150 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSL  150 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechh
Confidence            3699999999821           1               233444556779999887643

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.89  E-value=5.4e-05  Score=60.72  Aligned_cols=81  Identities=15%  Similarity=0.198  Sum_probs=56.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC---C---ceeecCCchhHHHHHHhHcC--
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF---D---DAFNYKEEPDLDAALNRCFP--  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~---~---~vi~~~~~~~~~~~i~~~~~--  148 (270)
                      .+.+++|+||++++|.++++.+...|++|+++++++++.+.+.+++   +.   .   ...|..+..+..+.+.+...  
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999999988766554343   22   1   11355554233333333221  


Q ss_pred             CCccEEEeCCCc
Q 042426          149 EGIDIYFENVGG  160 (270)
Q Consensus       149 ~~~d~v~d~~g~  160 (270)
                      +++|++++++|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            369999999984

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.88  E-value=6.8e-05  Score=59.04  Aligned_cols=79  Identities=13%  Similarity=0.233  Sum_probs=55.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHH-HHHHhCCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDL-LKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~-~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++ ++.+. ++ +.+..   ...|..+.+++.+.+.+..  .+++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            357899999999999999999998999999999887 65543 33 45532   1235555423333333221  13699


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      ++++++|
T Consensus        85 ~lv~nAg   91 (249)
T 2ew8_A           85 ILVNNAG   91 (249)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.88  E-value=5.6e-05  Score=58.88  Aligned_cols=80  Identities=15%  Similarity=0.321  Sum_probs=55.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      +.+++|+||++++|.+.++.+...|++|++++++.++.+.+.+++    +..   ...|..+.++..+.+.+...  +++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            568999999999999999999999999999999988776654333    332   12355554233332222211  369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus        82 d~li~~Ag~   90 (235)
T 3l77_A           82 DVVVANAGL   90 (235)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999883

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.87  E-value=0.00015  Score=58.58  Aligned_cols=105  Identities=10%  Similarity=0.069  Sum_probs=69.0

Q ss_pred             CCcEEEEecCCch--HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCC--ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASGA--VGQLVGQFVKLVGCYVVGSARSKEKVDLLK---HKFGFD--DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~--vG~~ai~la~~~g~~v~~~~~~~~~~~~~~---~~~g~~--~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      .+.++||+||+|+  +|.++++.+...|++|+++.++++..+.++   ++.+..  ...|..+.++..+.+.+..  .++
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGK  109 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999955  999999999999999999998865433332   233422  1235555423333333221  136


Q ss_pred             ccEEEeCCCcc------------------------------hHHHHHHccccCCEEEEEccccc
Q 042426          151 IDIYFENVGGK------------------------------MLDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       151 ~d~v~d~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      +|++++++|..                              ..+.++..+..+|+++.+++...
T Consensus       110 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A          110 LDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             CCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence            99999998831                              02344556667899999887554

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.87  E-value=0.00016  Score=56.54  Aligned_cols=78  Identities=18%  Similarity=0.251  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-CCC-ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-GFD-DAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~-g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++. +.. ...|..+..++.+.+.+  .+++|+++++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~vi~~   83 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGG--IGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT--CCCCSEEEEC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHH--cCCCCEEEEC
Confidence            3578999999999999999999889999999999988776665333 222 12344444233333331  1368999999


Q ss_pred             CC
Q 042426          158 VG  159 (270)
Q Consensus       158 ~g  159 (270)
                      +|
T Consensus        84 Ag   85 (244)
T 1cyd_A           84 AA   85 (244)
T ss_dssp             CC
T ss_pred             Cc
Confidence            98

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.87  E-value=0.00011  Score=58.23  Aligned_cols=80  Identities=15%  Similarity=0.230  Sum_probs=56.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhH---cCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRC---FPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~---~~~~  150 (270)
                      .+.+++|+||++++|.++++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++...+.+.   ..++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            3578999999999999999999999999999999988766554343   332   123555542333333332   1346


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            999999994

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.87  E-value=4.9e-05  Score=60.26  Aligned_cols=80  Identities=16%  Similarity=0.310  Sum_probs=55.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHh----CCC---ceeecCCchhHHHHHHhHcC--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-VDLLKHKF----GFD---DAFNYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~~--~  149 (270)
                      ++.+++|+||+|++|.++++.+...|++|+++++++++ .+.+.+++    +..   ...|..+..++.+.+.+...  +
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35789999999999999999999999999999988766 55544333    432   12355554233333333211  3


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|++++++|
T Consensus        83 ~iD~lv~~Ag   92 (260)
T 1x1t_A           83 RIDILVNNAG   92 (260)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.87  E-value=4.4e-05  Score=61.26  Aligned_cols=80  Identities=20%  Similarity=0.331  Sum_probs=56.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC---C---ceeecCCchhHHHHHHhHcC--
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF---D---DAFNYKEEPDLDAALNRCFP--  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~---~---~vi~~~~~~~~~~~i~~~~~--  148 (270)
                      .+.+++|+||++++|.++++.+...|++|+++++++++.+.+.+++   +.   .   ...|..+.+++.+.+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            3578999999999999999999889999999999988776654343   22   1   12355554233333332211  


Q ss_pred             CCccEEEeCCC
Q 042426          149 EGIDIYFENVG  159 (270)
Q Consensus       149 ~~~d~v~d~~g  159 (270)
                      +++|++++++|
T Consensus        85 g~iD~lv~nAg   95 (280)
T 1xkq_A           85 GKIDVLVNNAG   95 (280)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.86  E-value=7.9e-05  Score=59.03  Aligned_cols=80  Identities=21%  Similarity=0.325  Sum_probs=55.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++   +..   ...|..+.++..+.+.+..  .+++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999889999999999987765544232   332   1234444423333333221  1369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        93 D~lv~~Ag  100 (260)
T 2zat_A           93 DILVSNAA  100 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.86  E-value=8.1e-05  Score=57.89  Aligned_cols=79  Identities=19%  Similarity=0.207  Sum_probs=56.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcC--CCccEEEe
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFP--EGIDIYFE  156 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--~~~d~v~d  156 (270)
                      +.+++|+||+|++|..+++.+...|++|++++++.++.+.+.++++-.  ...|..+..++.+.+.+...  +++|++++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN   84 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            468999999999999999999889999999999988877666454321  12355554233333332211  35899999


Q ss_pred             CCC
Q 042426          157 NVG  159 (270)
Q Consensus       157 ~~g  159 (270)
                      ++|
T Consensus        85 ~Ag   87 (234)
T 2ehd_A           85 NAG   87 (234)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.86  E-value=7.1e-05  Score=59.89  Aligned_cols=81  Identities=16%  Similarity=0.305  Sum_probs=56.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC---C---ceeecCCchhHHHHHHhHcC--
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF---D---DAFNYKEEPDLDAALNRCFP--  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~---~---~vi~~~~~~~~~~~i~~~~~--  148 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++   +.   .   ...|..+..++.+.+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999889999999999988877665454   21   1   12355554233333332211  


Q ss_pred             CCccEEEeCCCc
Q 042426          149 EGIDIYFENVGG  160 (270)
Q Consensus       149 ~~~d~v~d~~g~  160 (270)
                      +++|++++++|.
T Consensus        85 g~id~lv~~Ag~   96 (278)
T 1spx_A           85 GKLDILVNNAGA   96 (278)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEEEECCCC
Confidence            369999999873

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.86  E-value=7e-05  Score=59.87  Aligned_cols=80  Identities=13%  Similarity=0.095  Sum_probs=55.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh----CCC---ceeecCCc----hhHHHHHHhHc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKF----GFD---DAFNYKEE----PDLDAALNRCF  147 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~----g~~---~vi~~~~~----~~~~~~i~~~~  147 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++ ++++.+.+.+++    +..   ...|..+.    +++.+.+.+..
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            3578999999999999999999889999999999 877766554343    432   11344443    23433333221


Q ss_pred             --CCCccEEEeCCC
Q 042426          148 --PEGIDIYFENVG  159 (270)
Q Consensus       148 --~~~~d~v~d~~g  159 (270)
                        .+++|++++++|
T Consensus        90 ~~~g~id~lv~nAg  103 (276)
T 1mxh_A           90 RAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence              136999999998

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.86  E-value=9.6e-05  Score=53.66  Aligned_cols=100  Identities=17%  Similarity=0.212  Sum_probs=62.7

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEE
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      ....++.+|+|.|+ |.+|+.+++.++..|.+|+++.+++++.+.++++.|.. ++..... + .+.+.+....++|+||
T Consensus        14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~-~-~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAA-E-FETLKECGMEKADMVF   89 (155)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTT-S-HHHHHTTTGGGCSEEE
T ss_pred             hcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCC-C-HHHHHHcCcccCCEEE
Confidence            34456789999997 99999999999999999999999888776654234543 3322211 2 1223332112699999


Q ss_pred             eCCCcch-HHHHHHcccc-C--CEEEEE
Q 042426          156 ENVGGKM-LDAVLLNMRI-C--GHIAVC  179 (270)
Q Consensus       156 d~~g~~~-~~~~~~~l~~-~--G~~v~~  179 (270)
                      .|++... ...+...++. +  .+++..
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~iv~~  117 (155)
T 2g1u_A           90 AFTNDDSTNFFISMNARYMFNVENVIAR  117 (155)
T ss_dssp             ECSSCHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred             EEeCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence            9999753 3333334433 3  455443

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.85  E-value=5.8e-05  Score=60.05  Aligned_cols=81  Identities=16%  Similarity=0.161  Sum_probs=56.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC----ceeecCCchhHHHHHHhHc--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD----DAFNYKEEPDLDAALNRCF--PE  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~----~vi~~~~~~~~~~~i~~~~--~~  149 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.+++    +..    ...|..+..+..+.+.+..  .+
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999999999999999988776655333    221    1235555423333333221  13


Q ss_pred             CccEEEeCCCc
Q 042426          150 GIDIYFENVGG  160 (270)
Q Consensus       150 ~~d~v~d~~g~  160 (270)
                      ++|++++++|.
T Consensus        87 ~id~lvnnAg~   97 (265)
T 3lf2_A           87 CASILVNNAGQ   97 (265)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999983

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.85  E-value=3.1e-05  Score=61.46  Aligned_cols=78  Identities=17%  Similarity=0.100  Sum_probs=55.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEe
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV-DLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFE  156 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~-~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d  156 (270)
                      +.++||+||++++|.++++.+...|++|+++++++++. +.++ +.+.. ...|..+..+..+.+.+..  .+++|++++
T Consensus        27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR-QAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH  105 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH-HHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-hcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            56899999999999999999988999999999887654 3333 55643 2235555423333333321  236999999


Q ss_pred             CCC
Q 042426          157 NVG  159 (270)
Q Consensus       157 ~~g  159 (270)
                      ++|
T Consensus       106 nAg  108 (260)
T 3gem_A          106 NAS  108 (260)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            998

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.85  E-value=7.7e-05  Score=58.59  Aligned_cols=79  Identities=20%  Similarity=0.209  Sum_probs=55.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      +.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++    +..   ...|..+.+++.+.+.+...  +++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            468999999999999999999889999999999988777665444    221   12354554233333332211  359


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        82 d~li~~Ag   89 (250)
T 2cfc_A           82 DVLVNNAG   89 (250)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.85  E-value=0.00014  Score=56.85  Aligned_cols=79  Identities=24%  Similarity=0.367  Sum_probs=53.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      |.+++|+||+|++|..+++.+...|++|+++ .+++++.+.+.++   .+..   ...|..+.+++.+.+.+..  .+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4589999999999999999999999999995 7777766554423   2432   1235555423433333321  2369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        81 d~li~~Ag   88 (244)
T 1edo_A           81 DVVVNNAG   88 (244)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.84  E-value=5.1e-05  Score=61.46  Aligned_cols=80  Identities=21%  Similarity=0.353  Sum_probs=56.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC---C---ceeecCCchhHHHHHHhHc--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF---D---DAFNYKEEPDLDAALNRCF--P  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~---~---~vi~~~~~~~~~~~i~~~~--~  148 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++   +.   .   ...|..+..++.+.+.+..  .
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            3678999999999999999999889999999999988776554333   22   1   1235555423333333221  1


Q ss_pred             CCccEEEeCCC
Q 042426          149 EGIDIYFENVG  159 (270)
Q Consensus       149 ~~~d~v~d~~g  159 (270)
                      +++|++++++|
T Consensus       105 g~iD~lvnnAG  115 (297)
T 1xhl_A          105 GKIDILVNNAG  115 (297)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.83  E-value=9.2e-05  Score=58.05  Aligned_cols=80  Identities=21%  Similarity=0.447  Sum_probs=56.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK----FGFD---DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++    .+..   ...|..+..++.+.+.+..  .++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            357899999999999999999988999999999998776655433    3432   1235455423433333321  236


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        86 ~d~vi~~Ag   94 (248)
T 2pnf_A           86 IDILVNNAG   94 (248)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.83  E-value=0.0001  Score=59.67  Aligned_cols=80  Identities=10%  Similarity=0.233  Sum_probs=56.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD---DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.+.+.+++    +..   ...|..+..++.+.+.+..  .+.
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999989999999999988766554333    432   1235555423333333321  236


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus       105 id~li~~Ag  113 (302)
T 1w6u_A          105 PNIVINNAA  113 (302)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999998

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.83  E-value=5.1e-05  Score=64.91  Aligned_cols=90  Identities=18%  Similarity=0.231  Sum_probs=69.5

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      -.|.+++|+|+ |++|..+++.++..|++|+++.+++.+...+. ..|.+ +.+..   +   .+     ..+|+++++.
T Consensus       263 L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa-~~g~d-v~~le---e---~~-----~~aDvVi~at  328 (488)
T 3ond_A          263 IAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAT-MEGLQ-VLTLE---D---VV-----SEADIFVTTT  328 (488)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECCGG---G---TT-----TTCSEEEECS
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HhCCc-cCCHH---H---HH-----HhcCEEEeCC
Confidence            46899999998 79999999999999999999999988877776 55653 22111   1   11     1489999999


Q ss_pred             Ccc--hHHHHHHccccCCEEEEEccc
Q 042426          159 GGK--MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       159 g~~--~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      |..  .....++.+++++.++.+|..
T Consensus       329 G~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          329 GNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             SCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             CChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            864  334588999999999998863

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.83  E-value=2.2e-05  Score=62.61  Aligned_cols=80  Identities=19%  Similarity=0.200  Sum_probs=55.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcC--CCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFP--EGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v~d  156 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+. .-... ...|..+..++.+.+.+...  +++|++++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            3578999999999999999999999999999999887765443 11111 22355554233333333211  36999999


Q ss_pred             CCCc
Q 042426          157 NVGG  160 (270)
Q Consensus       157 ~~g~  160 (270)
                      ++|.
T Consensus        94 nAg~   97 (266)
T 3p19_A           94 NAGM   97 (266)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9983

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.82  E-value=6e-05  Score=59.61  Aligned_cols=79  Identities=15%  Similarity=0.179  Sum_probs=54.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d  156 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++ +.+.++++.. ...|..+.+++.+.+.+..  .+++|++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~   83 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN   83 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            35789999999999999999998899999999988777 4444355321 1235555423333333321  136999999


Q ss_pred             CCC
Q 042426          157 NVG  159 (270)
Q Consensus       157 ~~g  159 (270)
                      ++|
T Consensus        84 ~Ag   86 (256)
T 2d1y_A           84 NAA   86 (256)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.82  E-value=0.00012  Score=58.48  Aligned_cols=80  Identities=16%  Similarity=0.304  Sum_probs=56.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-----ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-----DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      .+.+++|+||+|++|..+++.+...|++|+++.++.++.+.+.++++..     ...|..+..++.+.+.+..  .+++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3578999999999999999999889999999999887766655455431     1235555423333333221  13699


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      ++++++|
T Consensus        95 ~li~~Ag  101 (278)
T 2bgk_A           95 IMFGNVG  101 (278)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999987

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.82  E-value=2e-05  Score=61.48  Aligned_cols=96  Identities=18%  Similarity=0.184  Sum_probs=64.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .+|||+||+|++|..+++.+...| ++|+++++++++.+.+. ..+.. ...|..+..++.+.+.     ++|+||.+.+
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-----~~D~vv~~a~   97 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNSQIIMGDVLNHAALKQAMQ-----GQDIVYANLT   97 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTEEEEECCTTCHHHHHHHHT-----TCSEEEEECC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCcEEEEecCCCHHHHHHHhc-----CCCEEEEcCC
Confidence            579999999999999999999999 79999999877654322 11221 1234444423333332     4899999998


Q ss_pred             cc----hHHHHHHccccC--CEEEEEcccc
Q 042426          160 GK----MLDAVLLNMRIC--GHIAVCGMIS  183 (270)
Q Consensus       160 ~~----~~~~~~~~l~~~--G~~v~~g~~~  183 (270)
                      ..    ..+..++.++..  +++|.++...
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           98 GEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             STTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            64    234455555443  6899887744

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.81  E-value=3.6e-05  Score=60.70  Aligned_cols=98  Identities=14%  Similarity=0.148  Sum_probs=66.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcC--CCccEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFP--EGIDIYFENV  158 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~--~~~d~v~d~~  158 (270)
                      +.+++|+||+|++|.++++.+...|++|+++++++++.+.      ....+|..+.++....+.+...  +++|++++++
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~A   95 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAA   95 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            5789999999999999999999999999999987654321      1112334443244444444322  3799999999


Q ss_pred             Ccc---------------------------hHHHHHHccccCCEEEEEccccc
Q 042426          159 GGK---------------------------MLDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       159 g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      |..                           ..+.+...++++|+++.+++...
T Consensus        96 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  148 (251)
T 3orf_A           96 GGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA  148 (251)
T ss_dssp             CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             ccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence            830                           02344556667889999887554

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.81  E-value=0.00011  Score=59.24  Aligned_cols=79  Identities=19%  Similarity=0.257  Sum_probs=57.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHh-----CCC---ceeecCCchhHHHHHHhHcC-
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGC---YVVGSARSKEKVDLLKHKF-----GFD---DAFNYKEEPDLDAALNRCFP-  148 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~---~v~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~-  148 (270)
                      +.++||+||++++|.++++.+...|+   +|+++.++.++.+.+.+++     +..   ...|..+.+++.+.+.+... 
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  112 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQE  112 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGG
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            57899999999999999887776676   9999999988877765443     322   12356665355555554432 


Q ss_pred             -CCccEEEeCCC
Q 042426          149 -EGIDIYFENVG  159 (270)
Q Consensus       149 -~~~d~v~d~~g  159 (270)
                       +++|++++++|
T Consensus       113 ~g~iD~lVnnAG  124 (287)
T 3rku_A          113 FKDIDILVNNAG  124 (287)
T ss_dssp             GCSCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             36999999998

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.81  E-value=0.00019  Score=55.25  Aligned_cols=92  Identities=13%  Similarity=0.004  Sum_probs=64.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      +|||+||+|.+|..+++.+...|.+|++++|++++.+.+. ..+... ..|..+. +. +.+     +++|+||+++|..
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~-~~-~~~-----~~~d~vi~~ag~~   73 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVL-TE-ADL-----DSVDAVVDALSVP   73 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGC-CH-HHH-----TTCSEEEECCCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccc-cH-hhc-----ccCCEEEECCccC
Confidence            5999999999999999999888999999999988877554 333321 2344443 22 222     2599999999851


Q ss_pred             -----------hHHHHHHcccc-CCEEEEEccc
Q 042426          162 -----------MLDAVLLNMRI-CGHIAVCGMI  182 (270)
Q Consensus       162 -----------~~~~~~~~l~~-~G~~v~~g~~  182 (270)
                                 .....++.++. +++++.+++.
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  106 (224)
T 3h2s_A           74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS  106 (224)
T ss_dssp             TTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred             CCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence                       23445555543 4788888654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.80  E-value=0.0001  Score=57.85  Aligned_cols=77  Identities=19%  Similarity=0.051  Sum_probs=55.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEE-e--CCHHHHHHHHHHh-CCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGS-A--RSKEKVDLLKHKF-GFDDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~--~~~~~~~~~~~~~-g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      +.+++|+||++++|.++++.+...|++|+++ .  +++++.+.+.+++ +. .+.|..+...+.+.+.+.. +++|++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-g~iD~lv~   78 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHG-EAIDTIVS   78 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGS-SCEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence            3579999999999999999999999999999 6  8888877776455 32 2334333224444444433 36999999


Q ss_pred             CCC
Q 042426          157 NVG  159 (270)
Q Consensus       157 ~~g  159 (270)
                      ++|
T Consensus        79 ~Ag   81 (244)
T 1zmo_A           79 NDY   81 (244)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.80  E-value=0.0001  Score=58.08  Aligned_cols=81  Identities=20%  Similarity=0.302  Sum_probs=55.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +..   ...|..+..++.+.+.+..  .+++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            3578999999999999999999888999999999987765544332   332   1235455423333333221  1369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus        90 d~vi~~Ag~   98 (255)
T 1fmc_A           90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.79  E-value=8.7e-05  Score=58.77  Aligned_cols=80  Identities=18%  Similarity=0.224  Sum_probs=55.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.++||+||++++|.++++.+...|++|+++ .++.++.+.+.+++   +..   ...|..+.++..+.+.+...  ++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999987 77877766555343   332   12355554233333333211  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        83 id~lv~nAg   91 (258)
T 3oid_A           83 LDVFVNNAA   91 (258)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999997

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.79  E-value=0.00013  Score=57.67  Aligned_cols=78  Identities=17%  Similarity=0.322  Sum_probs=52.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK--VDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDI  153 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~--~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~  153 (270)
                      +.+++|+||+|++|..+++.+...|++|+++++++++  .+.+. +.+..   ...|..+.+++.+.+.+...  +++|+
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIA-RHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH-hcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999998899999999987541  22222 22432   12355554233333332211  36999


Q ss_pred             EEeCCC
Q 042426          154 YFENVG  159 (270)
Q Consensus       154 v~d~~g  159 (270)
                      +++++|
T Consensus        83 lv~~Ag   88 (255)
T 2q2v_A           83 LVNNAG   88 (255)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.79  E-value=0.00011  Score=58.99  Aligned_cols=81  Identities=15%  Similarity=0.254  Sum_probs=55.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-------------CHHHHHHHHHHh---CCC---ceeecCCchhHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-------------SKEKVDLLKHKF---GFD---DAFNYKEEPDLD  140 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-------------~~~~~~~~~~~~---g~~---~vi~~~~~~~~~  140 (270)
                      .|.+++|+||++++|.++++.+...|++|+++++             ++++.+.+.+++   +..   ...|..+..+..
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   93 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR   93 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            4689999999999999999999999999999987             566665554332   322   223555542333


Q ss_pred             HHHHhHc--CCCccEEEeCCCc
Q 042426          141 AALNRCF--PEGIDIYFENVGG  160 (270)
Q Consensus       141 ~~i~~~~--~~~~d~v~d~~g~  160 (270)
                      +.+.+..  .+++|++++++|.
T Consensus        94 ~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           94 ELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            3333321  1369999999883

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.79  E-value=0.00014  Score=58.98  Aligned_cols=80  Identities=16%  Similarity=0.272  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--------CCC---ceeecCCchhHHHHHHhHcC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF--------GFD---DAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~--------g~~---~vi~~~~~~~~~~~i~~~~~  148 (270)
                      .+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++        +..   ...|..+..++.+.+.+...
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999889999999999988766554333        222   11354554233333333211


Q ss_pred             --CCccEEEeCCC
Q 042426          149 --EGIDIYFENVG  159 (270)
Q Consensus       149 --~~~d~v~d~~g  159 (270)
                        +++|++|+++|
T Consensus        97 ~~g~id~li~~Ag  109 (303)
T 1yxm_A           97 TFGKINFLVNNGG  109 (303)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              35999999998

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.79  E-value=0.00016  Score=57.26  Aligned_cols=79  Identities=22%  Similarity=0.320  Sum_probs=55.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHh-----CCC---ceeecCCchhHHHHHHhHc--
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKL---VGCYVVGSARSKEKVDLLKHKF-----GFD---DAFNYKEEPDLDAALNRCF--  147 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~---~g~~v~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~--  147 (270)
                      +.+++|+||++++|.++++.+..   .|++|+++++++++.+.+.+++     +..   ...|..+.++..+.+.+..  
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVREL   85 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHS
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhc
Confidence            57899999999999999988877   8999999999988776655343     322   1235555434444444332  


Q ss_pred             --CCCcc--EEEeCCC
Q 042426          148 --PEGID--IYFENVG  159 (270)
Q Consensus       148 --~~~~d--~v~d~~g  159 (270)
                        .+++|  ++++++|
T Consensus        86 ~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           86 PRPEGLQRLLLINNAA  101 (259)
T ss_dssp             CCCTTCCEEEEEECCC
T ss_pred             cccccCCccEEEECCc
Confidence              23577  9999887

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.79  E-value=0.00018  Score=57.13  Aligned_cols=80  Identities=14%  Similarity=0.228  Sum_probs=55.3

Q ss_pred             CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhCCCc--eeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSK---EKVDLLKHKFGFDD--AFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~---~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.+++|+||+  |++|.++++.+...|++|+++++++   +..+.+.++.+...  ..|..+.+++.+.+.+...  ++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35789999998  9999999999988999999999876   34444442334322  2355554344444443322  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        88 iD~lv~~Ag   96 (265)
T 1qsg_A           88 FDGFVHSIG   96 (265)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.78  E-value=0.00036  Score=56.14  Aligned_cols=76  Identities=21%  Similarity=0.232  Sum_probs=54.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-ceeecCCchhHHHHHHhHcCCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD-DAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      +|.+++|+|++|++|.+++..+...|++|+++.++.++.+.+.+++    +.. ...|..+.+++.+.+.     .+|++
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~Dvl  192 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-----GAHFV  192 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-----TCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-----hCCEE
Confidence            5789999999999999999999999999999999988776554343    322 2235544312222222     38999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      ++++|.
T Consensus       193 Vn~ag~  198 (287)
T 1lu9_A          193 FTAGAI  198 (287)
T ss_dssp             EECCCT
T ss_pred             EECCCc
Confidence            999973

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.78  E-value=0.0001  Score=58.29  Aligned_cols=80  Identities=11%  Similarity=0.220  Sum_probs=54.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK--VDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~--~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      +.+++|+||++++|.++++.+...|++|++++++.++  .+.+.+++   +..   ...|..+.+++.+.+.+...  ++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999888889999999988766  54443233   322   12355554233333332211  36


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus        82 iD~lv~nAg~   91 (258)
T 3a28_C           82 FDVLVNNAGI   91 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.78  E-value=0.00018  Score=55.24  Aligned_cols=92  Identities=16%  Similarity=0.144  Sum_probs=64.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      +|||+||+|.+|..+++.+...|.+|++++|++++.+.+.  .+.. ...|..+. +. +.+     +++|+||.++|..
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~-~~-~~~-----~~~d~vi~~ag~~   72 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDL-TL-SDL-----SDQNVVVDAYGIS   72 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGC-CH-HHH-----TTCSEEEECCCSS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccCh-hh-hhh-----cCCCEEEECCcCC
Confidence            6999999999999999999999999999999987766542  2332 12344443 22 222     2599999999852


Q ss_pred             ---------hHHHHHHccccC--CEEEEEcccc
Q 042426          162 ---------MLDAVLLNMRIC--GHIAVCGMIS  183 (270)
Q Consensus       162 ---------~~~~~~~~l~~~--G~~v~~g~~~  183 (270)
                               .....++.++..  ++++.+++..
T Consensus        73 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~  105 (221)
T 3ew7_A           73 PDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA  105 (221)
T ss_dssp             TTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred             ccccchHHHHHHHHHHHHHhcCCceEEEEecce
Confidence                     234555555543  6888877643

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.78  E-value=0.00017  Score=57.40  Aligned_cols=78  Identities=18%  Similarity=0.277  Sum_probs=55.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---C--CC---ceeecCCchhHHHHHHhHcCCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---G--FD---DAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g--~~---~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      .+.++||+||++++|.++++.+...|++|+++++++++.+.+.+++   +  ..   ...|..+...+.+.+ +.. +++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~-g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI-EKY-PKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHH-HHC-CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHH-Hhc-CCC
Confidence            4678999999999999999999999999999999988766554333   1  11   123445542333333 322 369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        87 d~lv~nAg   94 (267)
T 3t4x_A           87 DILINNLG   94 (267)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.77  E-value=0.00013  Score=58.48  Aligned_cols=80  Identities=10%  Similarity=0.202  Sum_probs=54.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh----CCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKF----GFD---DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      +.++||+||++++|.++++.+...|++|+++++ +.++.+.+.+++    +..   ...|..+.+++.+.+.+..  .++
T Consensus        25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  104 (281)
T 3v2h_A           25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGG  104 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCC
Confidence            578999999999999999999999999999998 555555544333    222   1235555423333333321  236


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus       105 iD~lv~nAg~  114 (281)
T 3v2h_A          105 ADILVNNAGV  114 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.77  E-value=0.00011  Score=59.11  Aligned_cols=80  Identities=16%  Similarity=0.343  Sum_probs=55.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +.+++|+||+|++|..+++.+...|++|+++.+++++.+.+.+++   +..   ...|..+.+++.+.+.+..  .+++|
T Consensus        44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id  123 (285)
T 2c07_A           44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVD  123 (285)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            578999999999999999998888999999888877766554333   332   1235555423433333321  23699


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      ++|+++|.
T Consensus       124 ~li~~Ag~  131 (285)
T 2c07_A          124 ILVNNAGI  131 (285)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.76  E-value=0.00016  Score=57.40  Aligned_cols=81  Identities=20%  Similarity=0.360  Sum_probs=55.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHH---hHcCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALN---RCFPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~---~~~~~~  150 (270)
                      .+.+++|+||+|++|..+++.+...|++|+++.+++++.+.+.+++   +..   ...|..+..++.+.+.   +...++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            3578999999999999999999889999999999987766544333   332   1234444323333332   222246


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus        93 id~li~~Ag~  102 (266)
T 1xq1_A           93 LDILINNLGA  102 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CcEEEECCCC
Confidence            9999999873

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.76  E-value=8.1e-05  Score=58.80  Aligned_cols=80  Identities=25%  Similarity=0.323  Sum_probs=56.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDI  153 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~  153 (270)
                      |.+++|+||++++|.++++.+...  |++|+.+.+++++.+.+.++++..   ...|..+.++..+.+.+...  +++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            568999999999999988776655  479999999998888877666542   12355554233333332211  36999


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      +++++|.
T Consensus        82 lvnnAg~   88 (254)
T 3kzv_A           82 LVANAGV   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCcc
Confidence            9999884

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.76  E-value=0.00011  Score=58.71  Aligned_cols=79  Identities=14%  Similarity=0.248  Sum_probs=57.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF--D---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~--~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .+++|+||+|++|.++++.+...|++|+++++++++.+.+.+++..  .   ...|..+.+++.+.+.+...  +++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6899999999999999999999999999999998887776645532  1   12355555344444443322  368999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      ++++|.
T Consensus       102 vnnAG~  107 (272)
T 2nwq_A          102 INNAGL  107 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.75  E-value=8e-05  Score=59.58  Aligned_cols=79  Identities=15%  Similarity=0.140  Sum_probs=55.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhH---HHHHHhHcCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDL---DAALNRCFPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~---~~~i~~~~~~~  150 (270)
                      .|.+++|+||++++|.++++.+...|++|+++++++++.+.+.+++   +..   ...|..+..+.   .+.+.+.  ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g~  109 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--AP  109 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--CC
Confidence            4689999999999999999999999999999999877655554333   332   12344443233   3333333  46


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus       110 iD~lvnnAg~  119 (275)
T 4imr_A          110 VDILVINASA  119 (275)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.75  E-value=0.00012  Score=57.84  Aligned_cols=80  Identities=16%  Similarity=0.233  Sum_probs=54.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.+++|+||+|++|..+++.+...|++|+++++ ++++.+.+.+++   +..   ...|..+..++.+.+.+...  ++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999998888999999998 776655543232   322   12355544233333332211  35


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        86 id~li~~Ag   94 (261)
T 1gee_A           86 LDVMINNAG   94 (261)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.75  E-value=0.00016  Score=56.66  Aligned_cols=81  Identities=17%  Similarity=0.185  Sum_probs=55.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-C-ce--eec--CCchhHHHHHHhHc--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF-D-DA--FNY--KEEPDLDAALNRCF--P  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~-~-~v--i~~--~~~~~~~~~i~~~~--~  148 (270)
                      .+.+++|+||++++|..+++.+...|++|+++++++++.+.+.+++   +. . .+  +|.  .+..++.+.+.+..  .
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~   92 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF   92 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence            4679999999999999999999999999999999988776665333   21 1 12  232  33323333332221  1


Q ss_pred             CCccEEEeCCCc
Q 042426          149 EGIDIYFENVGG  160 (270)
Q Consensus       149 ~~~d~v~d~~g~  160 (270)
                      +++|++++++|.
T Consensus        93 g~id~lv~nAg~  104 (247)
T 3i1j_A           93 GRLDGLLHNASI  104 (247)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            369999999883

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.75  E-value=0.00013  Score=57.86  Aligned_cols=80  Identities=24%  Similarity=0.351  Sum_probs=56.3

Q ss_pred             CCcEEEEecCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---C-CC---ceeecCCchhHHHHHHhHcC--C
Q 042426           80 KGEYVYVSAASG-AVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---G-FD---DAFNYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        80 ~g~~vlI~ga~g-~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g-~~---~vi~~~~~~~~~~~i~~~~~--~  149 (270)
                      .+.+++|+||+| ++|..+++.+...|++|++++++.++.+.+.+++   + ..   ...|..+.+++.+.+.+...  +
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  100 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG  100 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence            467999999985 8999999999889999999999988776665444   2 11   22355554233333333211  3


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|++++++|
T Consensus       101 ~id~li~~Ag  110 (266)
T 3o38_A          101 RLDVLVNNAG  110 (266)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCC
Confidence            6899999998

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.75  E-value=0.00013  Score=58.59  Aligned_cols=80  Identities=16%  Similarity=0.226  Sum_probs=54.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC----------------HHHHHHHHHHh---CCC---ceeecCCch
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS----------------KEKVDLLKHKF---GFD---DAFNYKEEP  137 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~----------------~~~~~~~~~~~---g~~---~vi~~~~~~  137 (270)
                      .|.+++|+||++++|.++++.+...|++|++++++                .++.+.+.+++   +..   ...|..+.+
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            46899999999999999999999999999999876                55555544332   322   123555542


Q ss_pred             hHHHHHHhHcC--CCccEEEeCCC
Q 042426          138 DLDAALNRCFP--EGIDIYFENVG  159 (270)
Q Consensus       138 ~~~~~i~~~~~--~~~d~v~d~~g  159 (270)
                      +..+.+.+...  +++|++++++|
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg  113 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAG  113 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCc
Confidence            33333332211  36999999998

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.74  E-value=8.1e-05  Score=58.69  Aligned_cols=80  Identities=21%  Similarity=0.317  Sum_probs=54.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      +.+++|+||+|++|..+++.+...|++|++++++ +++.+.+.+++   +..   ...|..+..++.+.+.+...  +++
T Consensus         7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   86 (258)
T 3afn_B            7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGI   86 (258)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999998899999999988 66555443233   322   12355554233333332211  369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++|+++|.
T Consensus        87 d~vi~~Ag~   95 (258)
T 3afn_B           87 DVLINNAGG   95 (258)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.74  E-value=6.3e-05  Score=58.59  Aligned_cols=96  Identities=20%  Similarity=0.188  Sum_probs=66.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-Cce-eecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF-DDA-FNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~-~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +.+|+|+||+|.+|..+++.+...|++|+++++++++.+.+. ..+. ..+ .|..      +.+.+.. +++|+|++++
T Consensus        21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~~~~Dl~------~~~~~~~-~~~D~vi~~a   92 (236)
T 3e8x_A           21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-ERGASDIVVANLE------EDFSHAF-ASIDAVVFAA   92 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HTTCSEEEECCTT------SCCGGGG-TTCSEEEECC
T ss_pred             CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-hCCCceEEEcccH------HHHHHHH-cCCCEEEECC
Confidence            578999999999999999999889999999999998888776 5555 321 2222      2222222 2599999999


Q ss_pred             Ccch--------------HHHHHHcccc--CCEEEEEccccc
Q 042426          159 GGKM--------------LDAVLLNMRI--CGHIAVCGMISQ  184 (270)
Q Consensus       159 g~~~--------------~~~~~~~l~~--~G~~v~~g~~~~  184 (270)
                      |...              ....++.++.  .++++.++....
T Consensus        93 g~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           93 GSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             CCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence            8421              1223333332  378998877543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.74  E-value=4.3e-05  Score=60.36  Aligned_cols=94  Identities=16%  Similarity=0.201  Sum_probs=61.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcch
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKM  162 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~  162 (270)
                      +++|+||+|++|..+++.+...|++|+++++++++.+.       ....|..+.+++.+.+.+ ..+++|++++++|...
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~~~~Dl~~~~~v~~~~~~-~~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A            3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------DLSTAEGRKQAIADVLAK-CSKGMDGLVLCAGLGP   74 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHTT-CTTCCSEEEECCCCCT
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------ccccCCCCHHHHHHHHHH-hCCCCCEEEECCCCCC
Confidence            69999999999999999998899999999987643221       111233222123333332 2246899999998422


Q ss_pred             -------------------HHHHHHccccC--CEEEEEccccc
Q 042426          163 -------------------LDAVLLNMRIC--GHIAVCGMISQ  184 (270)
Q Consensus       163 -------------------~~~~~~~l~~~--G~~v~~g~~~~  184 (270)
                                         .+.++..+...  |+++.+++...
T Consensus        75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  117 (257)
T 1fjh_A           75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS  117 (257)
T ss_dssp             TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence                               33445555443  89999887654

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.73  E-value=6.5e-05  Score=59.44  Aligned_cols=105  Identities=12%  Similarity=0.117  Sum_probs=69.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--HHhCCC---ceeecCCchhHHHHHHhHcC--CCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK--HKFGFD---DAFNYKEEPDLDAALNRCFP--EGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~--~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d  152 (270)
                      .|.+++|+||++|+|.+.++.+...|++|++..+++++.+.+.  .+.+..   ...|..++.+..+.+.+...  |++|
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD   85 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD   85 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999999998765443332  133432   22455554333333333221  3699


Q ss_pred             EEEeCCCcc----------h---------------HHHHHHccc-cCCEEEEEccccc
Q 042426          153 IYFENVGGK----------M---------------LDAVLLNMR-ICGHIAVCGMISQ  184 (270)
Q Consensus       153 ~v~d~~g~~----------~---------------~~~~~~~l~-~~G~~v~~g~~~~  184 (270)
                      ++++++|..          .               .+.++..|+ .+|++|.+++...
T Consensus        86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  143 (258)
T 4gkb_A           86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA  143 (258)
T ss_dssp             EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH
T ss_pred             EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh
Confidence            999999831          1               234455554 4699999987654

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.72  E-value=0.00016  Score=58.25  Aligned_cols=80  Identities=14%  Similarity=0.151  Sum_probs=55.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHh----CCC---ceeecCCch--------------
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKHKF----GFD---DAFNYKEEP--------------  137 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~~~----g~~---~vi~~~~~~--------------  137 (270)
                      .+.+++|+|+++++|.++++.+...|++|++++ ++.++.+.+.+++    +..   ...|..+..              
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   87 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT   87 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccc
Confidence            357899999999999999999999999999999 9988776655343    322   123444442              


Q ss_pred             ---hHHHHHHhHc--CCCccEEEeCCC
Q 042426          138 ---DLDAALNRCF--PEGIDIYFENVG  159 (270)
Q Consensus       138 ---~~~~~i~~~~--~~~~d~v~d~~g  159 (270)
                         ++.+.+.+..  .+++|++++++|
T Consensus        88 ~~~~v~~~~~~~~~~~g~iD~lvnnAg  114 (291)
T 1e7w_A           88 LFTRCAELVAACYTHWGRCDVLVNNAS  114 (291)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence               2333332221  136999999997

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.72  E-value=0.00011  Score=59.18  Aligned_cols=80  Identities=24%  Similarity=0.285  Sum_probs=54.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC----ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD----DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~----~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++   .+..    ...|..+.++..+.+.+..  .++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999988999999999998877665433   2432    1235555423333333221  136


Q ss_pred             ccEEEeC-CC
Q 042426          151 IDIYFEN-VG  159 (270)
Q Consensus       151 ~d~v~d~-~g  159 (270)
                      +|+++++ .|
T Consensus       107 iD~li~naag  116 (286)
T 1xu9_A          107 LDMLILNHIT  116 (286)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999998 44

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.71  E-value=0.00016  Score=57.24  Aligned_cols=80  Identities=13%  Similarity=0.103  Sum_probs=54.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----------CC---ceeecCCchhHHHHHHhH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG----------FD---DAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g----------~~---~vi~~~~~~~~~~~i~~~  146 (270)
                      .+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++.          ..   ...|..+..++.+.+.+.
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            35789999999999999999988899999999999887766553331          11   123444442333333332


Q ss_pred             c--CCCc-cEEEeCCC
Q 042426          147 F--PEGI-DIYFENVG  159 (270)
Q Consensus       147 ~--~~~~-d~v~d~~g  159 (270)
                      .  .+++ |++++++|
T Consensus        86 ~~~~g~i~d~vi~~Ag  101 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAG  101 (264)
T ss_dssp             HHHHSSCCSEEEECCC
T ss_pred             HHHhCCCCeEEEECCC
Confidence            1  1246 99999987

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.71  E-value=0.0001  Score=58.76  Aligned_cols=81  Identities=17%  Similarity=0.214  Sum_probs=54.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.+++|+||++++|.++++.+...|++|+++++ +.+..+.+.++   .+..   ...|..+..+....+.+...  ++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999999887 55555544323   2332   12355554233333332211  36


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus       107 id~lv~nAg~  116 (269)
T 4dmm_A          107 LDVLVNNAGI  116 (269)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.71  E-value=0.00023  Score=57.03  Aligned_cols=81  Identities=14%  Similarity=0.135  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.+++|+||++++|.++++.+...|++|+++++ ++++.+.+.+++   +..   ...|..+.++..+.+.+...  ++
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  107 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR  107 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999985 666555443232   332   12355554344443333221  36


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus       108 iD~lvnnAg~  117 (280)
T 4da9_A          108 IDCLVNNAGI  117 (280)
T ss_dssp             CCEEEEECC-
T ss_pred             CCEEEECCCc
Confidence            9999999974

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.71  E-value=0.00016  Score=56.62  Aligned_cols=79  Identities=14%  Similarity=0.167  Sum_probs=55.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC-------EEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGC-------YVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~-------~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~  147 (270)
                      +.+++|+||+|++|..+++.+...|+       +|+++.+++++.+.+.+++   +..   ...|..+..++.+.+.+..
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999998888899       9999999988776665343   321   1235555423333333221


Q ss_pred             --CCCccEEEeCCC
Q 042426          148 --PEGIDIYFENVG  159 (270)
Q Consensus       148 --~~~~d~v~d~~g  159 (270)
                        .+++|++++++|
T Consensus        82 ~~~g~id~li~~Ag   95 (244)
T 2bd0_A           82 ERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHTSCCSEEEECCC
T ss_pred             HhCCCCCEEEEcCC
Confidence              236999999987

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.70  E-value=0.00013  Score=58.34  Aligned_cols=81  Identities=12%  Similarity=0.174  Sum_probs=54.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-------------CHHHHHHHHHH---hCCC---ceeecCCchhHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-------------SKEKVDLLKHK---FGFD---DAFNYKEEPDLD  140 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-------------~~~~~~~~~~~---~g~~---~vi~~~~~~~~~  140 (270)
                      .+.+++|+||++++|.++++.+...|++|+++++             +.++.+.+.+.   .+..   ...|..+..+..
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            4679999999999999999999999999999987             55555544322   2332   123555542333


Q ss_pred             HHHHhHcC--CCccEEEeCCCc
Q 042426          141 AALNRCFP--EGIDIYFENVGG  160 (270)
Q Consensus       141 ~~i~~~~~--~~~d~v~d~~g~  160 (270)
                      +.+.+...  +++|++++++|.
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            33333221  369999999983

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.70  E-value=0.00015  Score=57.14  Aligned_cols=77  Identities=16%  Similarity=0.057  Sum_probs=52.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH--KFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~--~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +++|+||++++|.++++.+...|++|+++++++++.+.+.+  ..+.. ..+|..+...+.+.+.+.. +++|++++++|
T Consensus         3 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lv~nAg   81 (254)
T 1zmt_A            3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSNDI   81 (254)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEECC
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHh-CCCCEEEECCC
Confidence            69999999999999999999999999999988776655431  22433 1223322112333333322 36999999987


Q ss_pred             c
Q 042426          160 G  160 (270)
Q Consensus       160 ~  160 (270)
                      .
T Consensus        82 ~   82 (254)
T 1zmt_A           82 F   82 (254)
T ss_dssp             C
T ss_pred             c
Confidence            3

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.70  E-value=0.00011  Score=58.58  Aligned_cols=81  Identities=25%  Similarity=0.361  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.+++|+||++++|.++++.+...|++|+++++ +++..+.+.+   +.+..   ...|..+..+..+.+.+...  ++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4679999999999999999999899999999998 4444444432   23432   12344554233333333221  36


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus       108 id~li~nAg~  117 (271)
T 4iin_A          108 LSYLVNNAGV  117 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999983

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.70  E-value=2.5e-05  Score=60.98  Aligned_cols=100  Identities=18%  Similarity=0.137  Sum_probs=63.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHH---HHHHhHcC-CCccEEEe
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLD---AALNRCFP-EGIDIYFE  156 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~---~~i~~~~~-~~~d~v~d  156 (270)
                      +.+++|+||+|++|.++++.+...|++|+++++++++.+.   .. .....|..+.++..   +.+.+..+ +++|++++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~-~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~   78 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD---SN-ILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC   78 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS---EE-EECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc---cc-EEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence            5689999999999999999999999999999987654220   00 00112333321222   23333332 46999999


Q ss_pred             CCCc--------c----h---------------HHHHHHccccCCEEEEEccccc
Q 042426          157 NVGG--------K----M---------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       157 ~~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      ++|.        .    .               .+.++..+..+|+++.+++...
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  133 (236)
T 1ooe_A           79 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  133 (236)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            9982        1    0               2334455556789999887554

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.70  E-value=0.00064  Score=50.65  Aligned_cols=93  Identities=14%  Similarity=0.081  Sum_probs=65.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCcee-ecCCchhHHHHHHhH-cCCCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDDAF-NYKEEPDLDAALNRC-FPEGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~i~~~-~~~~~d~v~d~  157 (270)
                      +++|+|.|+ |.+|+.+++.++.. |.+|+++++++++.+.++ +.|...+. |..+. +   .+.+. .-.++|+++.+
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~-~~g~~~~~gd~~~~-~---~l~~~~~~~~ad~vi~~  112 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR-SEGRNVISGDATDP-D---FWERILDTGHVKLVLLA  112 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH-HTTCCEEECCTTCH-H---HHHTBCSCCCCCEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH-HCCCCEEEcCCCCH-H---HHHhccCCCCCCEEEEe
Confidence            568999996 99999999999988 999999999999998888 77875332 33332 2   23333 12369999999


Q ss_pred             CCcc-hHH---HHHHccccCCEEEEE
Q 042426          158 VGGK-MLD---AVLLNMRICGHIAVC  179 (270)
Q Consensus       158 ~g~~-~~~---~~~~~l~~~G~~v~~  179 (270)
                      ++.. ...   ...+.+.+..+++..
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          113 MPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9864 222   233444455566654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.70  E-value=0.00016  Score=57.57  Aligned_cols=80  Identities=16%  Similarity=0.254  Sum_probs=54.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      ++.+++|+||+|++|..+++.+...|++|+++++ ++++.+.+.++   .+..   ...|..+..++.+.+.+...  ++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999989999999998 66665544323   2432   12355554233333332211  25


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus       100 ~d~vi~~Ag  108 (274)
T 1ja9_A          100 LDFVMSNSG  108 (274)
T ss_dssp             EEEEECCCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=97.69  E-value=0.00075  Score=52.04  Aligned_cols=101  Identities=12%  Similarity=0.096  Sum_probs=71.2

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCC-ceeecCCchhHHHHHHhHcCC
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHK---FGFD-DAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~---~g~~-~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      .+.+++.+||-+|  ++.|..++.+++.+  +.+|+++..+++..+.+++.   .|.. .-+..... +..+.+.....+
T Consensus        52 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g-da~~~l~~~~~~  128 (221)
T 3dr5_A           52 TNGNGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS-RPLDVMSRLAND  128 (221)
T ss_dssp             SCCTTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS-CHHHHGGGSCTT
T ss_pred             hCCCCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc-CHHHHHHHhcCC
Confidence            3444556999888  78899999999986  57999999999888777643   3443 23344333 454444443245


Q ss_pred             CccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426          150 GIDIYFENVGG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       150 ~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                      .||+||-....    ..++.+.+.|+|+|.++.-
T Consensus       129 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  162 (221)
T 3dr5_A          129 SYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLA  162 (221)
T ss_dssp             CEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred             CcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEe
Confidence            79999865443    2678899999999999874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.69  E-value=0.00018  Score=56.23  Aligned_cols=78  Identities=18%  Similarity=0.226  Sum_probs=53.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC----ceeecCCchhHHHHHHhHc--CCCc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHKF---GFD----DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~~---g~~----~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+++|+||+|++|..+++.+...|++|+++ .+++++.+.+.+++   +..    ...|..+..+..+.+.+..  .+++
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999998899999998 78877766554232   332    1124454423333333221  1369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        82 d~li~~Ag   89 (245)
T 2ph3_A           82 DTLVNNAG   89 (245)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.68  E-value=0.0002  Score=58.83  Aligned_cols=46  Identities=17%  Similarity=0.179  Sum_probs=39.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHh
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKHKF  125 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~~~  125 (270)
                      .+.++||+||++++|.++++.+...|++|++++ +++++.+.+.+++
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l   91 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL   91 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            367899999999999999999999999999999 9988776665443

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.68  E-value=0.00015  Score=58.30  Aligned_cols=80  Identities=16%  Similarity=0.219  Sum_probs=54.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHh----CCC---ceeecCC----chhHHHHHHhHc-
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLKHKF----GFD---DAFNYKE----EPDLDAALNRCF-  147 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~~~~----g~~---~vi~~~~----~~~~~~~i~~~~-  147 (270)
                      +.+++|+||++++|.++++.+...|++|++++++. ++.+.+.+++    +..   ...|..+    ..++.+.+.+.. 
T Consensus        23 ~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~  102 (288)
T 2x9g_A           23 APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFR  102 (288)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHH
Confidence            57899999999999999999888899999999887 6655544333    322   1235555    323333333221 


Q ss_pred             -CCCccEEEeCCCc
Q 042426          148 -PEGIDIYFENVGG  160 (270)
Q Consensus       148 -~~~~d~v~d~~g~  160 (270)
                       .+++|++|+++|.
T Consensus       103 ~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          103 AFGRCDVLVNNASA  116 (288)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence             1369999999873

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.67  E-value=0.00056  Score=48.64  Aligned_cols=93  Identities=17%  Similarity=0.129  Sum_probs=66.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-ecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAF-NYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .++|+|.|+ |.+|..+++.++..|.+|+++++++++.+.++ +.|...+. |..+. +   .+.+..-.++|.++-+++
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~-~~g~~~i~gd~~~~-~---~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR-ERGVRAVLGNAANE-E---IMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEESCTTSH-H---HHHHTTGGGCSEEEECCS
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HcCCCEEECCCCCH-H---HHHhcCcccCCEEEEECC
Confidence            467999997 99999999999999999999999999999988 67775332 33333 2   233322226899999998


Q ss_pred             cch----HHHHHHccccCCEEEEE
Q 042426          160 GKM----LDAVLLNMRICGHIAVC  179 (270)
Q Consensus       160 ~~~----~~~~~~~l~~~G~~v~~  179 (270)
                      ...    .....+.+.++.+++..
T Consensus        81 ~~~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           81 NGYEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             CHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             ChHHHHHHHHHHHHHCCCCeEEEE
Confidence            742    22344555667776654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.67  E-value=0.00026  Score=56.71  Aligned_cols=80  Identities=18%  Similarity=0.258  Sum_probs=54.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCC---ceeecCCchhHHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS------------KEKVDLLKH---KFGFD---DAFNYKEEPDLDA  141 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~------------~~~~~~~~~---~~g~~---~vi~~~~~~~~~~  141 (270)
                      .+.++||+||++++|.++++.+...|++|++++++            .++.+...+   ..+..   ...|..+.++..+
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            36799999999999999999999999999999986            444443321   33432   1235555423333


Q ss_pred             HHHhHcC--CCccEEEeCCC
Q 042426          142 ALNRCFP--EGIDIYFENVG  159 (270)
Q Consensus       142 ~i~~~~~--~~~d~v~d~~g  159 (270)
                      .+.+...  +++|++++++|
T Consensus        89 ~~~~~~~~~g~id~lv~nAg  108 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAG  108 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCC
T ss_pred             HHHHHHHhcCCCCEEEECCC
Confidence            3332211  36999999998

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.66  E-value=0.00028  Score=56.42  Aligned_cols=105  Identities=15%  Similarity=0.229  Sum_probs=67.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCC---ceeecCCchhHHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS------------KEKVDLLKH---KFGFD---DAFNYKEEPDLDA  141 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~------------~~~~~~~~~---~~g~~---~vi~~~~~~~~~~  141 (270)
                      .|.++||+||++++|.++++.+...|++|++++++            .++.+.+.+   ..+..   ...|..+.+++.+
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            46799999999999999999999999999999876            555444332   23432   1235555423333


Q ss_pred             HHHhHcC--CCccEEEeCCCcc----------------------hHHHHHHcccc---CCEEEEEccccc
Q 042426          142 ALNRCFP--EGIDIYFENVGGK----------------------MLDAVLLNMRI---CGHIAVCGMISQ  184 (270)
Q Consensus       142 ~i~~~~~--~~~d~v~d~~g~~----------------------~~~~~~~~l~~---~G~~v~~g~~~~  184 (270)
                      .+.+...  +++|++++++|..                      ..+.++..+..   +|+++.+++...
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  161 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG  161 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence            3333211  3699999999831                      12233444432   689999887554

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.66  E-value=0.00017  Score=56.31  Aligned_cols=75  Identities=15%  Similarity=0.263  Sum_probs=52.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcC--CCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFP--EGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v~d~  157 (270)
                      +.+++|+||+|++|.++++.+...|++|+++++++++  ..+ +++.. ...|..+. +..+.+.+...  +++|+++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~D~~~~-~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQ-SLGAVPLPTDLEKD-DPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHH-HHTCEEEECCTTTS-CHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHH-hhCcEEEecCCchH-HHHHHHHHHHHHcCCCCEEEEC
Confidence            4689999999999999999999999999999988766  223 55532 12344442 44443333211  369999999


Q ss_pred             CC
Q 042426          158 VG  159 (270)
Q Consensus       158 ~g  159 (270)
                      +|
T Consensus        78 Ag   79 (239)
T 2ekp_A           78 AA   79 (239)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.66  E-value=0.00011  Score=60.76  Aligned_cols=80  Identities=21%  Similarity=0.375  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHHhCCC---ceeecCCchhHHHHHHh
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-----------VDLLKHKFGFD---DAFNYKEEPDLDAALNR  145 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-----------~~~~~~~~g~~---~vi~~~~~~~~~~~i~~  145 (270)
                      .|.++||+||++++|.++++.+...|++|++++++.++           .+.++ ..|..   ...|..+.+++.+.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~-~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHH
Confidence            46899999999999999999999999999999987653           22333 34432   22456655333333333


Q ss_pred             HcC--CCccEEEeCCCc
Q 042426          146 CFP--EGIDIYFENVGG  160 (270)
Q Consensus       146 ~~~--~~~d~v~d~~g~  160 (270)
                      ...  +++|++++++|.
T Consensus       123 ~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            221  369999999983

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.66  E-value=0.00034  Score=58.96  Aligned_cols=89  Identities=16%  Similarity=0.196  Sum_probs=69.7

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      -.|.+|.|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|... .      ++.+.+.+     .|+++.+.
T Consensus       209 L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-~~G~~~-~------sL~eal~~-----ADVVilt~  274 (436)
T 3h9u_A          209 IAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINALQAA-MEGYQV-L------LVEDVVEE-----AHIFVTTT  274 (436)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-C------CHHHHTTT-----CSEEEECS
T ss_pred             ccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-HhCCee-c------CHHHHHhh-----CCEEEECC
Confidence            46889999997 99999999999999999999998887776665 666531 1      34444433     89999988


Q ss_pred             Ccc-hH-HHHHHccccCCEEEEEcc
Q 042426          159 GGK-ML-DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       159 g~~-~~-~~~~~~l~~~G~~v~~g~  181 (270)
                      +.. .+ ...++.|+++..++.++.
T Consensus       275 gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          275 GNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             SCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             CCcCccCHHHHhhcCCCcEEEEeCC
Confidence            763 33 367888999999999876

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.65  E-value=4.4e-05  Score=60.08  Aligned_cols=76  Identities=17%  Similarity=0.191  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHc--CCCccEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCF--PEGIDIYFEN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~--~~~~d~v~d~  157 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.   +  ...|..+.+++.+.+.+..  .+++|+++++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   88 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   88 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            3578999999999999999999889999999998765433221   1  2345555423333333221  1368999999


Q ss_pred             CCc
Q 042426          158 VGG  160 (270)
Q Consensus       158 ~g~  160 (270)
                      +|.
T Consensus        89 Ag~   91 (247)
T 1uzm_A           89 AGL   91 (247)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            883

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.65  E-value=0.00029  Score=57.06  Aligned_cols=80  Identities=13%  Similarity=0.233  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCC---ceeecCCchhHHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS------------KEKVDLLKH---KFGFD---DAFNYKEEPDLDA  141 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~------------~~~~~~~~~---~~g~~---~vi~~~~~~~~~~  141 (270)
                      .|.+++|+||++++|.++++.+...|++|++++++            .++.+.+.+   ..+..   ...|..+..+..+
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            46799999999999999999999999999999876            555444332   33432   1235555423333


Q ss_pred             HHHhHcC--CCccEEEeCCC
Q 042426          142 ALNRCFP--EGIDIYFENVG  159 (270)
Q Consensus       142 ~i~~~~~--~~~d~v~d~~g  159 (270)
                      .+.+...  +++|++++++|
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHhCCCCEEEECCC
Confidence            3333211  36999999988

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.64  E-value=7e-05  Score=60.19  Aligned_cols=95  Identities=15%  Similarity=0.131  Sum_probs=63.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +|||+||+|.+|..+++.+... |.+|++++|++++.+.+. ..+.. ...|..+.++    +.+... ++|+||.+++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-~~~v~~~~~D~~d~~~----l~~~~~-~~d~vi~~a~~   75 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-RGKVSVRQLDYFNQES----MVEAFK-GMDTVVFIPSI   75 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-BTTBEEEECCTTCHHH----HHHHTT-TCSEEEECCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-hCCCEEEEcCCCCHHH----HHHHHh-CCCEEEEeCCC
Confidence            4899999999999999988877 899999999887655443 33332 1235554422    333222 59999999884


Q ss_pred             c--------hHHHHHHccccC--CEEEEEcccc
Q 042426          161 K--------MLDAVLLNMRIC--GHIAVCGMIS  183 (270)
Q Consensus       161 ~--------~~~~~~~~l~~~--G~~v~~g~~~  183 (270)
                      .        .....++.++..  ++++.++...
T Consensus        76 ~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           76 IHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            1        233445555544  4888877644

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.64  E-value=0.00024  Score=58.21  Aligned_cols=79  Identities=20%  Similarity=0.340  Sum_probs=53.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHcC-
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-----KEKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCFP-  148 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-----~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~-  148 (270)
                      +.+++|+||+|++|.++++.+...|++|++++++     .++.+.+.+   ..+..   ...|..+..++.+.+.+... 
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999998765     344444331   23432   12355554344444433321 


Q ss_pred             -CCccEEEeCCC
Q 042426          149 -EGIDIYFENVG  159 (270)
Q Consensus       149 -~~~d~v~d~~g  159 (270)
                       |++|++++++|
T Consensus        85 ~g~iD~lVnnAG   96 (324)
T 3u9l_A           85 DGRIDVLIHNAG   96 (324)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             36999999998

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.64  E-value=0.00017  Score=56.46  Aligned_cols=81  Identities=20%  Similarity=0.303  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.+++|+|++|++|..+++.+...|++|+++ .+++++.+.+.++   .+..   ...|..+..++.+.+.+...  ++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            35789999999999999999999899999998 5555544443322   2432   12355554233333332211  36


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus        84 ~d~vi~~Ag~   93 (247)
T 2hq1_A           84 IDILVNNAGI   93 (247)
T ss_dssp             CCEEEECC--
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.63  E-value=0.0002  Score=56.18  Aligned_cols=77  Identities=19%  Similarity=0.389  Sum_probs=55.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CC-ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-FD-DAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      .+.+++|+||+|++|.++++.+...|++|+++++++++.+.+. +++ .. ...|..+..++. .+.+.. +++|+++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~-~~~~~~-~~id~lv~~   81 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQID-QFANEV-ERLDVLFNV   81 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHH-HHHHHC-SCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHH-HHHHHh-CCCCEEEEC
Confidence            3678999999999999999999999999999999987766554 332 11 123555542333 333322 369999999


Q ss_pred             CC
Q 042426          158 VG  159 (270)
Q Consensus       158 ~g  159 (270)
                      +|
T Consensus        82 Ag   83 (246)
T 2ag5_A           82 AG   83 (246)
T ss_dssp             CC
T ss_pred             Cc
Confidence            88

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.63  E-value=0.00017  Score=56.41  Aligned_cols=100  Identities=22%  Similarity=0.289  Sum_probs=68.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc-CCCccE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK--EKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF-PEGIDI  153 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~--~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~-~~~~d~  153 (270)
                      .|.+++|+||++++|.+.++.+...|++|+++.++.  +..+.++ +.|..   ...|..++ +-   +++.. .+++|+
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~-~~g~~~~~~~~Dv~d~-~~---v~~~~~~g~iDi   82 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIA-KDGGNASALLIDFADP-LA---AKDSFTDAGFDI   82 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTST-TT---TTTSSTTTCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHH-HhCCcEEEEEccCCCH-HH---HHHHHHhCCCCE
Confidence            478999999999999999999999999999999864  3455555 55543   12344443 21   22222 247999


Q ss_pred             EEeCCCcc-----------h---------------HHHHHHcc-c--cCCEEEEEccccc
Q 042426          154 YFENVGGK-----------M---------------LDAVLLNM-R--ICGHIAVCGMISQ  184 (270)
Q Consensus       154 v~d~~g~~-----------~---------------~~~~~~~l-~--~~G~~v~~g~~~~  184 (270)
                      +++++|..           .               .+.++..| +  .+|++|.+++...
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~  142 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS  142 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh
Confidence            99999831           0               23345444 3  3589999987654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.63  E-value=0.00014  Score=58.56  Aligned_cols=79  Identities=23%  Similarity=0.326  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHHhCCC---ceeecCCchhHHHHHHh
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-----------VDLLKHKFGFD---DAFNYKEEPDLDAALNR  145 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-----------~~~~~~~~g~~---~vi~~~~~~~~~~~i~~  145 (270)
                      .+.+++|+||++++|.++++.+...|++|++++++.++           .+.++ ..+..   ...|..+.++..+.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE-EAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence            36789999999999999999999899999999987652           22233 33432   12355554233333332


Q ss_pred             HcC--CCccEEEeCCC
Q 042426          146 CFP--EGIDIYFENVG  159 (270)
Q Consensus       146 ~~~--~~~d~v~d~~g  159 (270)
                      ...  +++|++++++|
T Consensus        87 ~~~~~g~id~lvnnAg  102 (285)
T 3sc4_A           87 TVEQFGGIDICVNNAS  102 (285)
T ss_dssp             HHHHHSCCSEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            211  36999999998

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.62  E-value=0.00022  Score=58.34  Aligned_cols=80  Identities=21%  Similarity=0.297  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEe---------CCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA---------RSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~---------~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      .|.+++|+||++++|..+++.+...|++|++.+         ++.++.+.+.+++   +...+.|..+..+..+.+.+..
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            367899999999999999999988999999964         4555544433232   3333456665533333333221


Q ss_pred             --CCCccEEEeCCC
Q 042426          148 --PEGIDIYFENVG  159 (270)
Q Consensus       148 --~~~~d~v~d~~g  159 (270)
                        .+++|++++++|
T Consensus        88 ~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           88 DTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHTSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence              236999999998

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.61  E-value=0.00033  Score=55.56  Aligned_cols=73  Identities=18%  Similarity=0.281  Sum_probs=50.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcC--CCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFP--EGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v~d~  157 (270)
                      +.++||+||+|++|..+++.+...|++|+++++++++    .  -... ...|..+.+++.+.+.+...  +++|+++++
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~   81 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----E--AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNN   81 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----S--CSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----C--CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            5789999999999999999999999999999987543    0  0111 12355554233333333211  369999999


Q ss_pred             CC
Q 042426          158 VG  159 (270)
Q Consensus       158 ~g  159 (270)
                      +|
T Consensus        82 Ag   83 (264)
T 2dtx_A           82 AG   83 (264)
T ss_dssp             CC
T ss_pred             CC
Confidence            88

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.61  E-value=0.00026  Score=56.03  Aligned_cols=80  Identities=18%  Similarity=0.241  Sum_probs=53.9

Q ss_pred             CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCc--eeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSKE---KVDLLKHKFGFDD--AFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~~---~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.+++|+||+  |++|.++++.+...|++|++++++++   ..+.+.++.+...  ..|..+.+++.+.+.+...  ++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999998  99999999988888999999998875   3444442334221  2355554233333332211  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        87 iD~lv~~Ag   95 (261)
T 2wyu_A           87 LDYLVHAIA   95 (261)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.60  E-value=0.00034  Score=53.27  Aligned_cols=101  Identities=14%  Similarity=0.238  Sum_probs=69.6

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-ceeecCCchhHHHHHHhHcCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFD-DAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      ....+.++++||-.|+  |.|..++.+++. +.+|++++.+++..+.+++.   .|.. .+ ..... +..+.+...  +
T Consensus        49 ~~l~~~~~~~vLDlGc--G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v-~~~~~-d~~~~~~~~--~  121 (204)
T 3njr_A           49 AALAPRRGELLWDIGG--GSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRM-RAVQG-TAPAALADL--P  121 (204)
T ss_dssp             HHHCCCTTCEEEEETC--TTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTE-EEEES-CTTGGGTTS--C
T ss_pred             HhcCCCCCCEEEEecC--CCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCE-EEEeC-chhhhcccC--C
Confidence            4456888999999984  458888899888 88999999999988877633   3544 22 11111 221111111  2


Q ss_pred             CccEEEeCCCcc--hHHHHHHccccCCEEEEEcc
Q 042426          150 GIDIYFENVGGK--MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       150 ~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .||+|+...+..  .++.+.+.|+|+|+++....
T Consensus       122 ~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          122 LPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             CCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             CCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence            599999765432  67888999999999987644

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.60  E-value=0.00029  Score=56.46  Aligned_cols=81  Identities=9%  Similarity=0.135  Sum_probs=56.0

Q ss_pred             CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhCCCc--eeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSK--EKVDLLKHKFGFDD--AFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~--~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .+.+++|+||+  +|+|.++++.+...|++|++++++.  +..+.+.++.+...  ..|..+.++..+.+.+..  .+++
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL  104 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            46799999998  6699999999989999999999877  56666654444322  235555423333333321  2369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus       105 d~li~nAg~  113 (280)
T 3nrc_A          105 DAIVHSIAF  113 (280)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999873

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.59  E-value=0.00016  Score=54.83  Aligned_cols=97  Identities=13%  Similarity=0.122  Sum_probs=62.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      .+|+|+||+|.+|..+++.+...|.+|+++++++++.+... ..+.. ...|..+.+++.+.+.     ++|+||.+++.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-----~~d~vi~~a~~   77 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVA-----GQDAVIVLLGT   77 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHT-----TCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCHHHHHHHHc-----CCCEEEECccC
Confidence            58999999999999999999888999999999876543221 11221 1224444323333332     48999999984


Q ss_pred             ch-----------HHHHHHcccc--CCEEEEEccccc
Q 042426          161 KM-----------LDAVLLNMRI--CGHIAVCGMISQ  184 (270)
Q Consensus       161 ~~-----------~~~~~~~l~~--~G~~v~~g~~~~  184 (270)
                      ..           ....++.+..  -++++.++....
T Consensus        78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~  114 (206)
T 1hdo_A           78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFL  114 (206)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeee
Confidence            21           2334444433  258888876543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.59  E-value=0.00035  Score=55.78  Aligned_cols=81  Identities=22%  Similarity=0.282  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-------HHHHHH---HhCCC---ceeecCCchhHHHHHHhH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK-------VDLLKH---KFGFD---DAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~-------~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~  146 (270)
                      .+.+++|+||++++|.++++.+...|++|++++++.++       .+.+.+   ..+..   ...|..+..+..+.+.+.
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            36789999999999999999998999999999987542       222211   33432   224555542333333332


Q ss_pred             cC--CCccEEEeCCCc
Q 042426          147 FP--EGIDIYFENVGG  160 (270)
Q Consensus       147 ~~--~~~d~v~d~~g~  160 (270)
                      ..  +++|++++++|.
T Consensus        85 ~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           85 VDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence            21  369999999983

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=97.59  E-value=0.00036  Score=54.81  Aligned_cols=103  Identities=12%  Similarity=0.063  Sum_probs=71.5

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcC-
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFP-  148 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~-  148 (270)
                      ...+.++.+||-+|  +|.|..++.+++.+  +.+|+++..+++..+.+++.+   |....+..... +..+.+..... 
T Consensus        58 l~~~~~~~~VLdiG--~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~l~~~~~~  134 (248)
T 3tfw_A           58 LVRLTQAKRILEIG--TLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREG-PALQSLESLGEC  134 (248)
T ss_dssp             HHHHHTCSEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHTCCSC
T ss_pred             HHhhcCCCEEEEec--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHhcCCC
Confidence            33456788999998  56688899999887  569999999999888777433   55422333333 45444444432 


Q ss_pred             CCccEEEeCCCc----chHHHHHHccccCCEEEEEc
Q 042426          149 EGIDIYFENVGG----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       149 ~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +.||+|+-....    ..++.+.+.|+|+|.++.-.
T Consensus       135 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          135 PAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            279999843332    26788899999999988753

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.58  E-value=0.0002  Score=56.74  Aligned_cols=80  Identities=15%  Similarity=0.147  Sum_probs=53.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD----LLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~----~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      +.+++|+||+|++|..+++.+...|++|++++++.++.+    .+.++.+..   ...|..+..++.+.+.+..  .+++
T Consensus        14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   93 (265)
T 1h5q_A           14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI   93 (265)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            568999999999999999999889999999998544332    222223432   1235555423433333321  2369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus        94 d~li~~Ag~  102 (265)
T 1h5q_A           94 SGLIANAGV  102 (265)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999873

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.58  E-value=0.00032  Score=56.27  Aligned_cols=80  Identities=11%  Similarity=0.156  Sum_probs=54.0

Q ss_pred             CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCC--ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSKE---KVDLLKHKFGFD--DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~~---~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      .+.+++|+||+  |++|.++++.+...|++|++++++++   ..+.+.++.+..  ...|..+..++.+.+.+..  .++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            36789999998  89999999999889999999998864   334443233422  1235555423333333221  236


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus       100 iD~lv~~Ag  108 (285)
T 2p91_A          100 LDIIVHSIA  108 (285)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.58  E-value=0.00022  Score=55.95  Aligned_cols=80  Identities=21%  Similarity=0.277  Sum_probs=53.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      +.+++|+||++++|.++++.+...|++|+++++ +.++.+.+.++   .+..   ...|..+.++..+.+.+...  +++
T Consensus         4 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (246)
T 3osu_A            4 TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSL   83 (246)
T ss_dssp             SCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            568999999999999999999999999998876 44555444323   3332   12355554233333333211  369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus        84 d~lv~nAg~   92 (246)
T 3osu_A           84 DVLVNNAGI   92 (246)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.57  E-value=0.00029  Score=56.20  Aligned_cols=78  Identities=15%  Similarity=0.221  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHH---HHHhHcCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDA---ALNRCFPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~---~i~~~~~~~  150 (270)
                      .|.++||+||++++|.++++.+...|++|+++++++...+... ++   +..   ...|..+.++..+   .+.+.  ++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~--g~  106 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVAD-EIADGGGSAEAVVADLADLEGAANVAEELAAT--RR  106 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHH-HHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHH-HHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc--CC
Confidence            4679999999999999999999999999999997654333333 33   221   1235555422222   22222  46


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus       107 iD~lv~nAg~  116 (273)
T 3uf0_A          107 VDVLVNNAGI  116 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999883

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.56  E-value=0.00033  Score=55.77  Aligned_cols=81  Identities=20%  Similarity=0.194  Sum_probs=54.5

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--C
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~  149 (270)
                      .++.+++|+||++++|.++++.+...|++|+++ .++.+..+.+.+++   +..   ...|..+.+++.+.+.+...  +
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            456799999999999999999999999999877 66666655544232   322   12355554233333333211  3


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|++++++|
T Consensus       104 ~id~li~nAg  113 (272)
T 4e3z_A          104 RLDGLVNNAG  113 (272)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.56  E-value=0.00027  Score=55.14  Aligned_cols=103  Identities=13%  Similarity=0.137  Sum_probs=71.0

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHc--
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCF--  147 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~--  147 (270)
                      .....++.+||-+|  +|.|..+..+++..  +.+|+++..+++..+.+++.+   |....+..... +..+.+.+..  
T Consensus        55 l~~~~~~~~VLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~~~~~~~~  131 (239)
T 2hnk_A           55 LTKISGAKRIIEIG--TFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLG-SALETLQVLIDS  131 (239)
T ss_dssp             HHHHHTCSEEEEEC--CTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHC
T ss_pred             HHHhhCcCEEEEEe--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHHHHHHHhh
Confidence            33456788999998  45799999999987  579999999998888777433   54332223222 3333333221  


Q ss_pred             ------------C-CCccEEEeCCCc----chHHHHHHccccCCEEEEEc
Q 042426          148 ------------P-EGIDIYFENVGG----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       148 ------------~-~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  180 (270)
                                  + +.||+|+.....    ..+..+.+.|+++|.++...
T Consensus       132 ~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          132 KSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             SSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                        1 469999987654    25688889999999998753

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.56  E-value=0.00038  Score=56.87  Aligned_cols=80  Identities=19%  Similarity=0.287  Sum_probs=54.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCC---ceeecCCchhHHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS------------KEKVDLLKH---KFGFD---DAFNYKEEPDLDA  141 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~------------~~~~~~~~~---~~g~~---~vi~~~~~~~~~~  141 (270)
                      .|.++||+||++++|.++++.+...|++|++++++            .++.+.+.+   +.+..   ...|..+..+..+
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            46799999999999999999999999999998765            444444332   23432   1235555423333


Q ss_pred             HHHhHcC--CCccEEEeCCC
Q 042426          142 ALNRCFP--EGIDIYFENVG  159 (270)
Q Consensus       142 ~i~~~~~--~~~d~v~d~~g  159 (270)
                      .+.+...  +++|++++++|
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg  144 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVG  144 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHcCCCCEEEECCC
Confidence            3333211  36999999998

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.55  E-value=0.00026  Score=56.22  Aligned_cols=81  Identities=12%  Similarity=0.167  Sum_probs=54.7

Q ss_pred             CCCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHH---HHHHhCCC--ceeecCCchhHHHHHHhHc--CC
Q 042426           79 KKGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSKEKVDL---LKHKFGFD--DAFNYKEEPDLDAALNRCF--PE  149 (270)
Q Consensus        79 ~~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~~~~~~---~~~~~g~~--~vi~~~~~~~~~~~i~~~~--~~  149 (270)
                      .++.++||+||+  +++|.++++.+...|++|+++++++...+.   +.++.+..  ...|..+..+....+.+..  .+
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   91 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD   91 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            457899999998  999999999999999999999887543333   33234432  2235555423333333321  13


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|++++++|
T Consensus        92 ~id~lv~nAg  101 (271)
T 3ek2_A           92 SLDGLVHSIG  101 (271)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCEEEECCc
Confidence            6999999987

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.55  E-value=0.00086  Score=54.48  Aligned_cols=75  Identities=15%  Similarity=0.192  Sum_probs=54.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC---HHHHHHHHHHhC----CC-ceeecCCchhHHHHHHhHcCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARS---KEKVDLLKHKFG----FD-DAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~---~~~~~~~~~~~g----~~-~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+.++++    .. .++++.+..++.+.+.+     
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----  226 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAE-----  226 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHT-----
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcC-----
Confidence            5789999997 9999999999999999 89999999   777666554443    21 23444442134444433     


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|+|++|+..
T Consensus       227 aDiIINaTp~  236 (315)
T 3tnl_A          227 SVIFTNATGV  236 (315)
T ss_dssp             CSEEEECSST
T ss_pred             CCEEEECccC
Confidence            8999999863

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.55  E-value=0.00031  Score=55.75  Aligned_cols=80  Identities=21%  Similarity=0.266  Sum_probs=53.5

Q ss_pred             CCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--
Q 042426           80 KGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSKE-----KVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--  147 (270)
Q Consensus        80 ~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~~-----~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--  147 (270)
                      .+.+++|+||+  +++|..+++.+...|++|++++++.+     ..+.+.+..+..   ...|..+.++..+.+.+..  
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            35789999999  89999999999899999999987643     233333244542   2245555423333333321  


Q ss_pred             CCCccEEEeCCC
Q 042426          148 PEGIDIYFENVG  159 (270)
Q Consensus       148 ~~~~d~v~d~~g  159 (270)
                      .+++|++++++|
T Consensus        99 ~g~id~li~nAg  110 (267)
T 3gdg_A           99 FGQIDAFIANAG  110 (267)
T ss_dssp             TSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            136999999998

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.54  E-value=0.0001  Score=56.94  Aligned_cols=95  Identities=14%  Similarity=0.132  Sum_probs=61.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      .+|||+||+|.+|..+++.+...|.+|+++++++++.+.+.  -+.. ...|..+..++.+.+.     ++|+||.++|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~-----~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCK-----GADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHT-----TCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhc-----CCCEEEEeCcC
Confidence            47999999999999999999999999999999876543221  1111 1234444323333332     49999999875


Q ss_pred             c------------hHHHHHHccccC--CEEEEEcccc
Q 042426          161 K------------MLDAVLLNMRIC--GHIAVCGMIS  183 (270)
Q Consensus       161 ~------------~~~~~~~~l~~~--G~~v~~g~~~  183 (270)
                      .            .....++.++..  ++++.++...
T Consensus        78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            2            123344444443  4888887643

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.53  E-value=0.0001  Score=56.70  Aligned_cols=94  Identities=13%  Similarity=0.168  Sum_probs=61.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      +|+|+||+|.+|..+++.+...|.+|++++|++++.+..   .+.. ...|..+   ..+.+.+... ++|+||.++|..
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d---~~~~~~~~~~-~~d~vi~~ag~~   74 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDW---TPEEMAKQLH-GMDAIINVSGSG   74 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTS---CHHHHHTTTT-TCSEEEECCCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccC---CHHHHHHHHc-CCCEEEECCcCC
Confidence            699999999999999999988899999999987654322   1221 1123333   1233443333 599999999842


Q ss_pred             ----------hHHHHHHccccC--CEEEEEcccc
Q 042426          162 ----------MLDAVLLNMRIC--GHIAVCGMIS  183 (270)
Q Consensus       162 ----------~~~~~~~~l~~~--G~~v~~g~~~  183 (270)
                                .....++.++..  ++++.++...
T Consensus        75 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           75 GKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             TSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence                      133444444443  5899887754

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.52  E-value=0.00023  Score=55.69  Aligned_cols=78  Identities=21%  Similarity=0.223  Sum_probs=55.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh-CCC---ceeecCCchhHHHHHH---hHcCC-C
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKF-GFD---DAFNYKEEPDLDAALN---RCFPE-G  150 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~-g~~---~vi~~~~~~~~~~~i~---~~~~~-~  150 (270)
                      +.+++|+||+|++|..+++.+...|  ++|++++++.++.+.++ +. +..   ...|..+..++.+.+.   +..+. +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            5689999999999999999998899  99999999988777776 44 221   1235454423333332   22221 5


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++|+++|
T Consensus        82 id~li~~Ag   90 (250)
T 1yo6_A           82 LSLLINNAG   90 (250)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCc
Confidence            999999987

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.52  E-value=0.00023  Score=55.30  Aligned_cols=103  Identities=13%  Similarity=0.101  Sum_probs=69.7

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHc-CC
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCF-PE  149 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~-~~  149 (270)
                      .....++.+||-.|+  |.|..++.+++.. +.+|+++..+++..+.+++.+   |....+..... +..+.+.... .+
T Consensus        49 ~~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~  125 (233)
T 2gpy_A           49 LLKMAAPARILEIGT--AIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG-DALQLGEKLELYP  125 (233)
T ss_dssp             HHHHHCCSEEEEECC--TTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS-CGGGSHHHHTTSC
T ss_pred             HHhccCCCEEEEecC--CCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-CHHHHHHhcccCC
Confidence            334567889999984  4888899999887 579999999999888877433   54321222222 2222222221 23


Q ss_pred             CccEEEeCCCc----chHHHHHHccccCCEEEEEc
Q 042426          150 GIDIYFENVGG----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       150 ~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  180 (270)
                      .||+|+.....    ..+..+.+.|+++|+++...
T Consensus       126 ~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          126 LFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             CEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             CccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            69999876653    36678889999999998753

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.50  E-value=0.00044  Score=54.43  Aligned_cols=104  Identities=18%  Similarity=0.148  Sum_probs=65.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCH--HHHHHHHHHh-CCC---ceeecCCc-hhHHHHHHhHcC--CC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSK--EKVDLLKHKF-GFD---DAFNYKEE-PDLDAALNRCFP--EG  150 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~--~~~~~~~~~~-g~~---~vi~~~~~-~~~~~~i~~~~~--~~  150 (270)
                      +.+++|+||+|++|..+++.+...|++ |+++++++  +..+.+.+.. +..   ...|..+. ++..+.+.+...  ++
T Consensus         5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   84 (254)
T 1sby_A            5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKT   84 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSC
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCC
Confidence            578999999999999999999999996 88888875  3445554232 211   12344443 244333333211  36


Q ss_pred             ccEEEeCCCc---ch---------------HHHHHHcccc-----CCEEEEEccccc
Q 042426          151 IDIYFENVGG---KM---------------LDAVLLNMRI-----CGHIAVCGMISQ  184 (270)
Q Consensus       151 ~d~v~d~~g~---~~---------------~~~~~~~l~~-----~G~~v~~g~~~~  184 (270)
                      +|++++++|.   ..               .+.++..+..     +|+++.+++...
T Consensus        85 id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (254)
T 1sby_A           85 VDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh
Confidence            9999999983   11               2233444432     588999887554

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.50  E-value=0.00021  Score=57.16  Aligned_cols=79  Identities=20%  Similarity=0.310  Sum_probs=53.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHcC--CCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCFP--EGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d  152 (270)
                      +.+++|+||+|++|..++..+...|++|++++++.++.+.+.+   ..+..   ...|..+.+++.+.+.+...  +.+|
T Consensus        34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  113 (279)
T 3ctm_A           34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTID  113 (279)
T ss_dssp             TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999888889999999987655444332   23432   12355554233333333211  3589


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      ++++++|
T Consensus       114 ~li~~Ag  120 (279)
T 3ctm_A          114 VFVANAG  120 (279)
T ss_dssp             EEEECGG
T ss_pred             EEEECCc
Confidence            9999987

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.50  E-value=0.00061  Score=56.29  Aligned_cols=76  Identities=14%  Similarity=0.215  Sum_probs=54.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhCCCc----eeecCCchhHHHHHHhHcCCCccE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLV-GC-YVVGSARSKEKVDLLKHKFGFDD----AFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~-g~-~v~~~~~~~~~~~~~~~~~g~~~----vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      .+.+|||+||+|.+|..+++.+... |. +|+++++++.+.+.+.+.+....    ..|.++. +   .+.+... ++|+
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~---~l~~~~~-~~D~   94 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL-E---RLNYALE-GVDI   94 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH-H---HHHHHTT-TCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH-H---HHHHHHh-cCCE
Confidence            4678999999999999999888777 98 99999999888776664554221    2344443 2   2333222 5999


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      ||.+++.
T Consensus        95 Vih~Aa~  101 (344)
T 2gn4_A           95 CIHAAAL  101 (344)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999974

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.49  E-value=0.00039  Score=55.31  Aligned_cols=80  Identities=16%  Similarity=0.262  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---hCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKHK---FGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .+.+++|+||++++|.++++.+...|++|+++. ++.+..+...++   .+..   ...|..+..+..+.+.+...  ++
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGK  103 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999998 555544433322   2322   12355554233333332211  36


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus       104 id~li~nAg  112 (269)
T 3gk3_A          104 VDVLINNAG  112 (269)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.48  E-value=0.00027  Score=55.59  Aligned_cols=105  Identities=20%  Similarity=0.231  Sum_probs=64.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC-c--eeecCCchhHHH---HHHhHc--
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGS-ARSKEKVDLLKHKF---GFD-D--AFNYKEEPDLDA---ALNRCF--  147 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~-~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~---~i~~~~--  147 (270)
                      .+.+++|+||++++|.++++.+...|++|+++ .++.++.+.+.+++   +.. .  ..|..+..+...   .+.+..  
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            46799999999999999999999999999886 45555444433232   321 1  123444312222   222211  


Q ss_pred             --C-CCccEEEeCCCcc-----------h---------------HHHHHHccccCCEEEEEccccc
Q 042426          148 --P-EGIDIYFENVGGK-----------M---------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       148 --~-~~~d~v~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                        . +.+|++++++|..           .               .+.++..++++|+++.+++...
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~  151 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  151 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence              1 2599999998831           1               1223334556789999887654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.48  E-value=0.00048  Score=53.86  Aligned_cols=73  Identities=23%  Similarity=0.182  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      .+.+|+|+||+|.+|..+++.+...  |.+|+++++++++.+.+.  .+.. ...|..+.+++.+.+.     ++|+||.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~-----~~d~vi~   75 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAFQ-----GIDALVI   75 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHHT-----TCSEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC--CCeeEEEecCCCHHHHHHHHc-----CCCEEEE
Confidence            3568999999999999999988888  789999999877654331  1222 1234444323333332     4899999


Q ss_pred             CCC
Q 042426          157 NVG  159 (270)
Q Consensus       157 ~~g  159 (270)
                      ++|
T Consensus        76 ~a~   78 (253)
T 1xq6_A           76 LTS   78 (253)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            987

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=97.48  E-value=0.00043  Score=53.79  Aligned_cols=102  Identities=12%  Similarity=0.083  Sum_probs=70.0

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHc--C
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCF--P  148 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~--~  148 (270)
                      ....++.+||-+|  ++.|..++.+++.+  +.+|+++..+++..+.+++.   .|....+..... +..+.+.+..  +
T Consensus        68 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~l~~l~~~~  144 (232)
T 3cbg_A           68 ISLTGAKQVLEIG--VFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLG-PALATLEQLTQGK  144 (232)
T ss_dssp             HHHHTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHHHHHHTSS
T ss_pred             HHhcCCCEEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcC
Confidence            3345678999998  56899999999877  56999999999888777633   355332333332 4444444332  1


Q ss_pred             --CCccEEEeCCCc----chHHHHHHccccCCEEEEEc
Q 042426          149 --EGIDIYFENVGG----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       149 --~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  180 (270)
                        +.||+||-....    ..++.+.++|+|+|.++.-.
T Consensus       145 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          145 PLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             SCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence              469999844332    26788999999999998753

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.47  E-value=0.00073  Score=54.63  Aligned_cols=102  Identities=11%  Similarity=0.005  Sum_probs=71.7

Q ss_pred             hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcC
Q 042426           72 LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        72 l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~  148 (270)
                      +.....++++++||-+|  +|.|..+..+++..|++|++++.+++..+.+++..   |...-+..... ++.    +. +
T Consensus        64 ~~~~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~-~  135 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GWE----EF-D  135 (302)
T ss_dssp             HHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC-CGG----GC-C
T ss_pred             HHHHcCCCCcCEEEEee--ccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-CHH----Hc-C
Confidence            33456788999999998  55699999999988999999999999888887432   33211222211 221    11 4


Q ss_pred             CCccEEEeCCCc----------------chHHHHHHccccCCEEEEEcc
Q 042426          149 EGIDIYFENVGG----------------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       149 ~~~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +.||+|+....-                ..+..+.+.|+|+|+++....
T Consensus       136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  184 (302)
T 3hem_A          136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  184 (302)
T ss_dssp             CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred             CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence            579999874321                357788899999999987654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.46  E-value=0.00021  Score=56.08  Aligned_cols=94  Identities=18%  Similarity=0.289  Sum_probs=59.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcch
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKM  162 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~  162 (270)
                      ++||+||+|++|..+++.+...|++|+++++++++.+.       ....|..+..++.+.+.+. .+++|++++++|...
T Consensus         3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~-~~~~d~vi~~Ag~~~   74 (255)
T 2dkn_A            3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRC-GGVLDGLVCCAGVGV   74 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHH-TTCCSEEEECCCCCT
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHc-CCCccEEEECCCCCC
Confidence            69999999999999999888889999999987543210       1112222221233333332 246999999987321


Q ss_pred             -------------------HHHHHHcccc--CCEEEEEccccc
Q 042426          163 -------------------LDAVLLNMRI--CGHIAVCGMISQ  184 (270)
Q Consensus       163 -------------------~~~~~~~l~~--~G~~v~~g~~~~  184 (270)
                                         ++.+.+.+..  .++++.+++...
T Consensus        75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~  117 (255)
T 2dkn_A           75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA  117 (255)
T ss_dssp             TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence                               1233334433  389998877554

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.46  E-value=0.00038  Score=56.94  Aligned_cols=81  Identities=20%  Similarity=0.257  Sum_probs=53.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC----------HHHHHHHHHH---hCCC---ceeecCCchhHHHHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS----------KEKVDLLKHK---FGFD---DAFNYKEEPDLDAAL  143 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~----------~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i  143 (270)
                      .|.++||+||++++|.++++.+...|++|++++++          .++.+.+.++   .+..   ...|..+..+..+.+
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            46799999999999999999998899999999876          3444333323   3332   113444442333333


Q ss_pred             HhHcC--CCccEEEeCCCc
Q 042426          144 NRCFP--EGIDIYFENVGG  160 (270)
Q Consensus       144 ~~~~~--~~~d~v~d~~g~  160 (270)
                      .+...  +++|++++++|.
T Consensus       106 ~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            32211  369999999983

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.46  E-value=0.00098  Score=52.33  Aligned_cols=72  Identities=31%  Similarity=0.392  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      .+.+++|+||+|++|.++++.+...|++|++++++++.   ++ +++.... .|. .. +....+.+..  ++|++++++
T Consensus        18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~-~~~~~~~~~D~-~~-~~~~~~~~~~--~iD~lv~~A   89 (249)
T 1o5i_A           18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LK-RSGHRYVVCDL-RK-DLDLLFEKVK--EVDILVLNA   89 (249)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HH-HTCSEEEECCT-TT-CHHHHHHHSC--CCSEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HH-hhCCeEEEeeH-HH-HHHHHHHHhc--CCCEEEECC
Confidence            46789999999999999999998899999999988743   33 4442111 233 22 3444443332  599999999


Q ss_pred             C
Q 042426          159 G  159 (270)
Q Consensus       159 g  159 (270)
                      |
T Consensus        90 g   90 (249)
T 1o5i_A           90 G   90 (249)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.46  E-value=0.00015  Score=57.84  Aligned_cols=77  Identities=19%  Similarity=0.189  Sum_probs=52.1

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcC--CCccEEE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFP--EGIDIYF  155 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v~  155 (270)
                      ..+.++||+||++++|.++++.+...|++|++++++++...    . ... ...|..+..+..+.+.+...  +++|+++
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   86 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILV   86 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45789999999999999999999999999999998765431    1 111 22455554233333332211  3699999


Q ss_pred             eCCCc
Q 042426          156 ENVGG  160 (270)
Q Consensus       156 d~~g~  160 (270)
                      +++|.
T Consensus        87 ~nAg~   91 (269)
T 3vtz_A           87 NNAGI   91 (269)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99983

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.45  E-value=0.00091  Score=47.39  Aligned_cols=75  Identities=17%  Similarity=0.175  Sum_probs=53.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +.+|+|+|+ |.+|..+++.+...|.+|+++++++++.+.++ +.+...+ .|..+.    +.+.+...+++|+++.+++
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-~~~~~~~~~d~~~~----~~l~~~~~~~~d~vi~~~~   79 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEE----NELLSLGIRNFEYVIVAIG   79 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-TTCSEEEECCTTCH----HHHHTTTGGGCSEEEECCC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCEEEEeCCCCH----HHHHhcCCCCCCEEEECCC
Confidence            457999998 99999999999999999999999888777665 4454322 122221    2333321236999999998


Q ss_pred             cc
Q 042426          160 GK  161 (270)
Q Consensus       160 ~~  161 (270)
                      ..
T Consensus        80 ~~   81 (144)
T 2hmt_A           80 AN   81 (144)
T ss_dssp             SC
T ss_pred             Cc
Confidence            64

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.45  E-value=0.0013  Score=52.57  Aligned_cols=94  Identities=12%  Similarity=0.046  Sum_probs=62.2

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC----CceeecCCchhHHHHHHhHcCCCccE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF----DDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      -.+.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++.    ..+...... ++.+.+.+     +|+
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~-~l~~~l~~-----~Di  197 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR-GIEDVIAA-----ADG  197 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST-THHHHHHH-----SSE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH-HHHHHHhc-----CCE
Confidence            35789999998 9999999999988999 799999999888766545532    112122222 45555544     899


Q ss_pred             EEeCCCcchH-----HHHHHccccCCEEEEE
Q 042426          154 YFENVGGKML-----DAVLLNMRICGHIAVC  179 (270)
Q Consensus       154 v~d~~g~~~~-----~~~~~~l~~~G~~v~~  179 (270)
                      |++|+.....     ......++++..++.+
T Consensus       198 VInaTp~Gm~~~~~~pi~~~~l~~~~~v~Dl  228 (283)
T 3jyo_A          198 VVNATPMGMPAHPGTAFDVSCLTKDHWVGDV  228 (283)
T ss_dssp             EEECSSTTSTTSCSCSSCGGGCCTTCEEEEC
T ss_pred             EEECCCCCCCCCCCCCCCHHHhCCCCEEEEe
Confidence            9999863211     1123455666655554

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.45  E-value=0.00022  Score=56.51  Aligned_cols=80  Identities=13%  Similarity=0.209  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHH--HhCCC---ceeecCCchhHHHHHH---hHcC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVG---CYVVGSARSKEKVDLLKH--KFGFD---DAFNYKEEPDLDAALN---RCFP  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g---~~v~~~~~~~~~~~~~~~--~~g~~---~vi~~~~~~~~~~~i~---~~~~  148 (270)
                      ++.+++|+||+|++|..+++.+...|   ++|++++++.++.+.+.+  +.+..   ...|..+.+++.+.+.   +..+
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   99 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   99 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcC
Confidence            35689999999999999999998889   999999988765443331  11322   1235555424443333   2222


Q ss_pred             C-CccEEEeCCC
Q 042426          149 E-GIDIYFENVG  159 (270)
Q Consensus       149 ~-~~d~v~d~~g  159 (270)
                      . ++|++|+++|
T Consensus       100 ~~~id~li~~Ag  111 (267)
T 1sny_A          100 DQGLNVLFNNAG  111 (267)
T ss_dssp             GGCCSEEEECCC
T ss_pred             CCCccEEEECCC
Confidence            2 5999999987

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=97.44  E-value=0.00084  Score=52.33  Aligned_cols=102  Identities=13%  Similarity=0.080  Sum_probs=69.3

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHc---
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCF---  147 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~---  147 (270)
                      ....++.+||-+|  ++.|..++.+++.+  +.+|+.+..+++..+.+++.   .|....+..... +..+.+....   
T Consensus        66 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~  142 (237)
T 3c3y_A           66 LKLVNAKKTIEVG--VFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIES-DAMLALDNLLQGQ  142 (237)
T ss_dssp             HHHTTCCEEEEEC--CTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHST
T ss_pred             HHhhCCCEEEEeC--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcc
Confidence            3345678999998  67788888999886  57999999999888877633   355322333222 3333333321   


Q ss_pred             --CCCccEEEeCCCc----chHHHHHHccccCCEEEEEc
Q 042426          148 --PEGIDIYFENVGG----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       148 --~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  180 (270)
                        .+.||+||-....    ..++.+.++|+|||.++.-.
T Consensus       143 ~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~  181 (237)
T 3c3y_A          143 ESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN  181 (237)
T ss_dssp             TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence              3469999855432    26788899999999988643

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.43  E-value=0.00016  Score=57.24  Aligned_cols=76  Identities=14%  Similarity=0.227  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHc--CCCccEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCF--PEGIDIYFEN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~--~~~~d~v~d~  157 (270)
                      .|.++||+||++|+|++.++.+...|++|+++.++.++.  +.+.+  ....|..+.++....+.+..  -|++|+++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnn   85 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--LPEEL--FVEADLTTKEGCAIVAEATRQRLGGVDVIVHM   85 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--SCTTT--EEECCTTSHHHHHHHHHHHHHHTSSCSEEEEC
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--CCcEE--EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            578999999999999999999999999999999864321  11011  12234555423333333221  2469999998


Q ss_pred             CC
Q 042426          158 VG  159 (270)
Q Consensus       158 ~g  159 (270)
                      +|
T Consensus        86 AG   87 (261)
T 4h15_A           86 LG   87 (261)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.42  E-value=0.0019  Score=45.74  Aligned_cols=75  Identities=23%  Similarity=0.216  Sum_probs=56.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      ..+++|.|+ |.+|..+++.+...|.+|+++++++++.+.++ +.+...+ .|..++    +.+.+..-.++|.++.+++
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~-~~~~~~~~gd~~~~----~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE-DEGFDAVIADPTDE----SFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEECCTTCH----HHHHHSCCTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HCCCcEEECCCCCH----HHHHhCCcccCCEEEEecC
Confidence            357999998 99999999999999999999999999998887 6665422 233333    2333332237999999999


Q ss_pred             cc
Q 042426          160 GK  161 (270)
Q Consensus       160 ~~  161 (270)
                      ..
T Consensus        80 ~~   81 (141)
T 3llv_A           80 DD   81 (141)
T ss_dssp             CH
T ss_pred             CH
Confidence            64

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.41  E-value=0.0013  Score=51.61  Aligned_cols=103  Identities=16%  Similarity=0.210  Sum_probs=73.3

Q ss_pred             hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhH
Q 042426           72 LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        72 l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~  146 (270)
                      +.....++++++||-.|+  |.|..+..+++..  +.+|+++..+++..+.+++.   .|....+..... ++.+.   .
T Consensus        85 i~~~~~~~~~~~vldiG~--G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~  158 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGV--GSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK-DIYEG---I  158 (255)
T ss_dssp             HHHHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-CGGGC---C
T ss_pred             HHHhhCCCCCCEEEEecC--CchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-chhhc---c
Confidence            335567889999999984  4588899999885  56999999999888877743   355432223222 33211   1


Q ss_pred             cCCCccEEEeCCCcc--hHHHHHHccccCCEEEEEc
Q 042426          147 FPEGIDIYFENVGGK--MLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       147 ~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g  180 (270)
                      ..+.+|+|+......  .+..+.+.|+++|+++...
T Consensus       159 ~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          159 EEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             CCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            123699999877653  8899999999999998764

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=97.40  E-value=0.0014  Score=51.50  Aligned_cols=101  Identities=12%  Similarity=0.088  Sum_probs=68.8

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHc---
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCF---  147 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~---  147 (270)
                      ....++.+||-+|  ++.|..++.+++.+  +.+|+.+..+++..+.+++.   .|...-+..... +..+.+....   
T Consensus        75 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~  151 (247)
T 1sui_A           75 LKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKDE  151 (247)
T ss_dssp             HHHTTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHSG
T ss_pred             HHhhCcCEEEEeC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHHHHHHHHHhcc
Confidence            3345678999998  77899999999987  57999999998887777633   354322333222 3333333221   


Q ss_pred             --CCCccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426          148 --PEGIDIYFENVGG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       148 --~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                        .+.||+||-....    ..++.+.++|+++|.++.-
T Consensus       152 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  189 (247)
T 1sui_A          152 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  189 (247)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             CCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence              3469999854432    3678899999999999864

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.40  E-value=0.00052  Score=54.31  Aligned_cols=79  Identities=16%  Similarity=0.241  Sum_probs=52.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-EKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      +.+++|+||++++|.++++.+...|++|++++++. +..+.+++..   +..   ...|..+.+++.+.+.+...  +++
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   86 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKI   86 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999999987654 3444444222   211   12355554234333333221  369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus        87 d~lv~~Ag   94 (264)
T 3i4f_A           87 DFLINNAG   94 (264)
T ss_dssp             CEEECCCC
T ss_pred             CEEEECCc
Confidence            99999998

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.40  E-value=0.001  Score=54.12  Aligned_cols=101  Identities=14%  Similarity=0.107  Sum_probs=70.2

Q ss_pred             hhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCC
Q 042426           73 HELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        73 ~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      .....+.++++||-+|.  |.|..+..+++..|++|++++.+++..+.+++..   |....+..... ++.    +. ++
T Consensus        83 ~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~-~~  154 (318)
T 2fk8_A           83 LDKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GWE----DF-AE  154 (318)
T ss_dssp             HTTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CGG----GC-CC
T ss_pred             HHhcCCCCcCEEEEEcc--cchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-ChH----HC-CC
Confidence            34556788999999984  4588899999887999999999999888887443   33211222111 221    11 24


Q ss_pred             CccEEEeC-----CCc----chHHHHHHccccCCEEEEEcc
Q 042426          150 GIDIYFEN-----VGG----KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       150 ~~d~v~d~-----~g~----~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .||+|+..     .+.    ..+..+.+.|+|+|+++....
T Consensus       155 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          155 PVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             CCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             CcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            69999876     332    267788899999999987544

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.39  E-value=0.00058  Score=51.80  Aligned_cols=74  Identities=20%  Similarity=0.263  Sum_probs=52.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +++|+||+|++|..+++.+...  +|+++++++++.+.+.++++.. ...|..+..++.+.+.+  .+++|++++++|.
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag~   76 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEE--AGPLDLLVHAVGK   76 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHH--HCSEEEEEECCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHh--cCCCCEEEECCCc
Confidence            6899999999999888877655  9999999988877766455431 12355554234444443  2469999999873

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.39  E-value=0.00061  Score=52.07  Aligned_cols=101  Identities=18%  Similarity=0.204  Sum_probs=69.7

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~  148 (270)
                      ....+.++++||.+|+  |.|..+..+++..|  .+|+++..+++..+.+++.   .+...+ ..... +....+.  ..
T Consensus        71 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~--~~  144 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIGT--GCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNV-IVIVG-DGTLGYE--PL  144 (215)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTE-EEEES-CGGGCCG--GG
T ss_pred             HhhCCCCCCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC-CcccCCC--CC
Confidence            4456888999999984  46999999999876  7999999999888777643   344322 22111 2211111  12


Q ss_pred             CCccEEEeCCCcc-hHHHHHHccccCCEEEEEc
Q 042426          149 EGIDIYFENVGGK-MLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       149 ~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g  180 (270)
                      +.||+|+.+..-. ..+.+.+.|+++|+++..-
T Consensus       145 ~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          145 APYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence            3699999876653 4578889999999988753

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=97.39  E-value=0.00079  Score=51.78  Aligned_cols=103  Identities=15%  Similarity=0.062  Sum_probs=69.3

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhH---
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRC---  146 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~---  146 (270)
                      .....++.+||-+|  +|.|..++.+++.+  +.+|+++..+++..+.+++.   .|....+..... +..+.+...   
T Consensus        53 l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~  129 (223)
T 3duw_A           53 LVQIQGARNILEIG--TLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTG-LALDSLQQIENE  129 (223)
T ss_dssp             HHHHHTCSEEEEEC--CTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHHT
T ss_pred             HHHhhCCCEEEEec--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhc
Confidence            34456778999998  66788899999887  57999999999888777633   355332222222 333333322   


Q ss_pred             cCCCccEEEeCCCc----chHHHHHHccccCCEEEEEc
Q 042426          147 FPEGIDIYFENVGG----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       147 ~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  180 (270)
                      ..+.||+||-....    ..+..+.+.|+|+|.++.-.
T Consensus       130 ~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  167 (223)
T 3duw_A          130 KYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN  167 (223)
T ss_dssp             TCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred             CCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            11359999854432    26788899999999887643

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.38  E-value=0.00066  Score=51.33  Aligned_cols=63  Identities=16%  Similarity=0.256  Sum_probs=46.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +++|+||+|++|..+++.+. .|++|++++++++           ....|..+.+++.+.+.+.  +++|+++.++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            79999999999999999888 8999999998753           1234555542344444443  45899999987

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.37  E-value=0.00049  Score=54.31  Aligned_cols=77  Identities=18%  Similarity=0.172  Sum_probs=51.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc-CCCccEEEe
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF-PEGIDIYFE  156 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~-~~~~d~v~d  156 (270)
                      +.++||+||++++|.++++.+...|++|++++++.++.  .. +++..   ...|..+.++....+.... .+++|++++
T Consensus         9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~   85 (257)
T 3tl3_A            9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VA-DLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVN   85 (257)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH--HH-HTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH--HH-hcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence            57899999999999999999988999999999854432  22 44542   2235555423332222111 246999999


Q ss_pred             CCCc
Q 042426          157 NVGG  160 (270)
Q Consensus       157 ~~g~  160 (270)
                      ++|.
T Consensus        86 nAg~   89 (257)
T 3tl3_A           86 CAGT   89 (257)
T ss_dssp             CGGG
T ss_pred             CCCC
Confidence            9983

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.36  E-value=0.00056  Score=54.31  Aligned_cols=79  Identities=15%  Similarity=0.135  Sum_probs=51.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      +.+++|+||++++|..+++.+...|++|++.. ++.++.+...+++   +..   ...|..+.++..+.+.+..  .+++
T Consensus        26 ~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  105 (267)
T 4iiu_A           26 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAW  105 (267)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            57899999999999999999999999997755 5555544443232   322   2235555423333333221  1369


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |++++++|
T Consensus       106 d~li~nAg  113 (267)
T 4iiu_A          106 YGVVSNAG  113 (267)
T ss_dssp             SEEEECCC
T ss_pred             cEEEECCC
Confidence            99999987

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.36  E-value=0.0013  Score=49.81  Aligned_cols=102  Identities=14%  Similarity=0.145  Sum_probs=69.8

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      ....++++++||-.|+  |.|..++.+++.. +.+|++++.+++..+.+++.   .|.+.+ +.... +..+.+..  .+
T Consensus        34 ~~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~~--~~  107 (204)
T 3e05_A           34 SKLRLQDDLVMWDIGA--GSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNV-TLVEA-FAPEGLDD--LP  107 (204)
T ss_dssp             HHTTCCTTCEEEEETC--TTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTE-EEEEC-CTTTTCTT--SC
T ss_pred             HHcCCCCCCEEEEECC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcE-EEEeC-Chhhhhhc--CC
Confidence            4557889999999984  4588899999886 36999999999988877633   344322 11111 11111111  13


Q ss_pred             CccEEEeCCCc----chHHHHHHccccCCEEEEEcc
Q 042426          150 GIDIYFENVGG----KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       150 ~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .+|+|+.....    ..+..+.+.|+++|+++....
T Consensus       108 ~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          108 DPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             CCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence            59999987652    477889999999999988643

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.36  E-value=0.00028  Score=56.42  Aligned_cols=95  Identities=17%  Similarity=0.262  Sum_probs=61.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +|+|+||+|.+|..+++.+...  |.+|+++++++++.+.+. ..+... ..|..+..+    +.+... ++|+||.+++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~----~~~~~~-~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDEAA----LTSALQ-GVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH-HTTCEEEECCTTCHHH----HHHHTT-TCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh-cCCCeEEEcCCCCHHH----HHHHHh-CCCEEEEeCC
Confidence            4899999999999999988777  899999999877665554 334432 234444312    333222 4899999987


Q ss_pred             cc------hHHHHHHcccc-C-CEEEEEcccc
Q 042426          160 GK------MLDAVLLNMRI-C-GHIAVCGMIS  183 (270)
Q Consensus       160 ~~------~~~~~~~~l~~-~-G~~v~~g~~~  183 (270)
                      ..      .....++.+.. + ++++.++...
T Consensus        75 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           75 SEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             -------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             CCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            41      23344444433 3 5888877644

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=97.36  E-value=0.00052  Score=53.01  Aligned_cols=104  Identities=12%  Similarity=0.076  Sum_probs=70.1

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcC-
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFP-  148 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~-  148 (270)
                      ..+..++.+||-.|  ++.|..++.+++.+  +.+|+++..+++..+.+++.+   |....+..... +..+.+.+... 
T Consensus        64 l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~~~~~~~~  140 (229)
T 2avd_A           64 LARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLAA  140 (229)
T ss_dssp             HHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHHT
T ss_pred             HHHhcCCCEEEEEc--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEc-CHHHHHHHHHhc
Confidence            34456778999998  55899999999876  569999999998887777433   54222233222 34333333211 


Q ss_pred             ---CCccEEEeCCCc----chHHHHHHccccCCEEEEEcc
Q 042426          149 ---EGIDIYFENVGG----KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       149 ---~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~  181 (270)
                         +.||+|+-....    ..+..+.++|+++|.++....
T Consensus       141 ~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  180 (229)
T 2avd_A          141 GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV  180 (229)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence               369998865432    368889999999999987543

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=97.35  E-value=0.00073  Score=52.03  Aligned_cols=102  Identities=14%  Similarity=0.099  Sum_probs=69.1

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcC--
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFP--  148 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~--  148 (270)
                      ....++.+||-.|  +|.|..++.+++.+  +.+|+++..+++..+.+++.+   |....+..... +..+.+.....  
T Consensus        60 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~  136 (225)
T 3tr6_A           60 VKLMQAKKVIDIG--TFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS-PAKDTLAELIHAG  136 (225)
T ss_dssp             HHHHTCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHTTT
T ss_pred             HHhhCCCEEEEeC--CcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC-CHHHHHHHhhhcc
Confidence            3455778999998  56788899999876  569999999998887776433   54322223222 34333333221  


Q ss_pred             --CCccEEEeCCCc----chHHHHHHccccCCEEEEEc
Q 042426          149 --EGIDIYFENVGG----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       149 --~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  180 (270)
                        +.||+|+-....    ..+..+.+.|+|+|.++.-.
T Consensus       137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          137 QAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence              469999854442    25788889999999998743

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.34  E-value=0.00055  Score=53.91  Aligned_cols=80  Identities=23%  Similarity=0.301  Sum_probs=51.1

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHH----HHHHHHhCCC-c--eeecCCchhHHHHHHhHc--C
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKV----DLLKHKFGFD-D--AFNYKEEPDLDAALNRCF--P  148 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~----~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~--~  148 (270)
                      .++.++||+||++++|.++++.+...|++|++++ ++.++.    +.++ ..+.. .  ..|..+.++..+.+.+..  .
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQK-ALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999988 333332    2222 33432 1  234444423333333221  1


Q ss_pred             CCccEEEeCCC
Q 042426          149 EGIDIYFENVG  159 (270)
Q Consensus       149 ~~~d~v~d~~g  159 (270)
                      +++|++++++|
T Consensus        90 g~id~lv~~Ag  100 (256)
T 3ezl_A           90 GEIDVLVNNAG  100 (256)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999988

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.34  E-value=0.0003  Score=55.29  Aligned_cols=76  Identities=17%  Similarity=0.323  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d  156 (270)
                      .+.+++|+||+|++|.++++.+...|++|++++++++.    + +.+.. ...|..+.+++.+.+.+..  .+++|++++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~   80 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----E-QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN   80 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----S-CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----h-cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            35789999999999999999999999999999987542    2 33321 1235555423443333321  236999999


Q ss_pred             CCCc
Q 042426          157 NVGG  160 (270)
Q Consensus       157 ~~g~  160 (270)
                      ++|.
T Consensus        81 ~Ag~   84 (250)
T 2fwm_X           81 AAGI   84 (250)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9973

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.32  E-value=0.0018  Score=51.52  Aligned_cols=94  Identities=12%  Similarity=0.050  Sum_probs=61.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      ++.+++|+|+ |++|.++++.+...|++|++..++.++.+.+.++++....++..+..+    +.+   +++|++++|++
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~---~~~DivVn~t~  189 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE----LEG---HEFDLIINATS  189 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG----GTT---CCCSEEEECCS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHH----hcc---CCCCEEEECCC
Confidence            5789999998 899999999999999999999999988776665665411122211101    111   46999999998


Q ss_pred             cchHHH----HHHccccCCEEEEEcc
Q 042426          160 GKMLDA----VLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~~~~~~----~~~~l~~~G~~v~~g~  181 (270)
                      ......    ....++++..++.+..
T Consensus       190 ~~~~~~~~~i~~~~l~~~~~v~D~~y  215 (271)
T 1nyt_A          190 SGISGDIPAIPSSLIHPGIYCYDMFY  215 (271)
T ss_dssp             CGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred             CCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            643210    1123455555555543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.32  E-value=0.00052  Score=61.25  Aligned_cols=81  Identities=21%  Similarity=0.270  Sum_probs=49.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR---------SKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~---------~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      .|.+++|+||++++|.+.++.+...|++|+++++         +.++.+.+.+   ..+...+.|..+..+..+.+.+..
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            3678999999999999999999889999999876         4444333332   334444556665534444444433


Q ss_pred             C--CCccEEEeCCCc
Q 042426          148 P--EGIDIYFENVGG  160 (270)
Q Consensus       148 ~--~~~d~v~d~~g~  160 (270)
                      .  +++|++++++|.
T Consensus        98 ~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           98 KAFGRVDILVNNAGI  112 (613)
T ss_dssp             -------CEECCCCC
T ss_pred             HHCCCCcEEEECCCC
Confidence            2  368999999983

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.31  E-value=0.0001  Score=58.44  Aligned_cols=76  Identities=18%  Similarity=0.149  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcC--CCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFP--EGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v~d  156 (270)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+..    ... ...|..+.++..+.+.+...  +++|++++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  102 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP----DIHTVAGDISKPETADRIVREGIERFGRIDSLVN  102 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST----TEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC----ceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            357899999999999999999999999999999875432211    111 12355554233333332211  36999999


Q ss_pred             CCC
Q 042426          157 NVG  159 (270)
Q Consensus       157 ~~g  159 (270)
                      ++|
T Consensus       103 nAg  105 (260)
T 3un1_A          103 NAG  105 (260)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            997

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=97.30  E-value=0.0021  Score=52.10  Aligned_cols=88  Identities=15%  Similarity=0.141  Sum_probs=66.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|...++.++.+|++|++..++.++ +.+. +.|+.. .      ++.+.+.+     .|+|+.++.
T Consensus       141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~-~------~l~ell~~-----aDvV~l~~p  205 (307)
T 1wwk_A          141 EGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-ERAK-EVNGKF-V------DLETLLKE-----SDVVTIHVP  205 (307)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HTTCEE-C------CHHHHHHH-----CSEEEECCC
T ss_pred             CCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-hcCccc-c------CHHHHHhh-----CCEEEEecC
Confidence            4679999997 999999999999999999999987766 4455 677632 1      34444443     899999886


Q ss_pred             cc-----hH-HHHHHccccCCEEEEEccc
Q 042426          160 GK-----ML-DAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       160 ~~-----~~-~~~~~~l~~~G~~v~~g~~  182 (270)
                      ..     .+ ...+..+++++.++.++..
T Consensus       206 ~~~~t~~li~~~~l~~mk~ga~lin~arg  234 (307)
T 1wwk_A          206 LVESTYHLINEERLKLMKKTAILINTSRG  234 (307)
T ss_dssp             CSTTTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred             CChHHhhhcCHHHHhcCCCCeEEEECCCC
Confidence            32     22 4677889999999998773

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=97.29  E-value=0.00031  Score=54.78  Aligned_cols=99  Identities=7%  Similarity=-0.065  Sum_probs=67.4

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEE-
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIY-  154 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v-  154 (270)
                      ..+|.+||-+|  .|.|..+..+++..+.+++++..+++-.+.++ +....  .-+..... +..........+.||.| 
T Consensus        58 ~~~G~rVLdiG--~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~-~~~~~~~~~~~~~~~-~a~~~~~~~~~~~FD~i~  133 (236)
T 3orh_A           58 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLR-DWAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHTTSCEEEEEEEECCHHHHHHHH-HHGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEE
T ss_pred             ccCCCeEEEEC--CCccHHHHHHHHhCCcEEEEEeCCHHHHHHHH-HHHhhCCCceEEEee-hHHhhcccccccCCceEE
Confidence            36789999999  66788888888877789999999999888888 43221  11111111 34443434334478887 


Q ss_pred             EeCCCc-----------chHHHHHHccccCCEEEEEc
Q 042426          155 FENVGG-----------KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       155 ~d~~g~-----------~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +|+...           ..+..+.++|+|||+++.+.
T Consensus       134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             EeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            565432           14567889999999998764

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=97.29  E-value=0.00086  Score=52.90  Aligned_cols=103  Identities=9%  Similarity=0.101  Sum_probs=70.0

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      ....++++.+||-.|  +|.|..+..+++..+.+|++++.++...+.+++......-+..... ++.+.  ....+.||+
T Consensus        49 ~~~~~~~~~~vLdiG--~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-d~~~~--~~~~~~fD~  123 (266)
T 3ujc_A           49 SDIELNENSKVLDIG--SGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEAN-DILTK--EFPENNFDL  123 (266)
T ss_dssp             TTCCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEEC-CTTTC--CCCTTCEEE
T ss_pred             HhcCCCCCCEEEEEC--CCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEEC-ccccC--CCCCCcEEE
Confidence            455678899999998  5588889999987799999999999999998843322101111111 11110  111237999


Q ss_pred             EEeCCCc---------chHHHHHHccccCCEEEEEcc
Q 042426          154 YFENVGG---------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       154 v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      |+....-         ..+..+.+.|+|+|+++....
T Consensus       124 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          124 IYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            9876431         256888899999999987754

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.28  E-value=0.00023  Score=56.11  Aligned_cols=74  Identities=16%  Similarity=0.178  Sum_probs=51.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHc--CCCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCF--PEGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~~~~d~v~d~  157 (270)
                      +.+++|+||+|++|.++++.+...|++|+++++++++.+.      .. ...|..+.+++.+.+.+..  .+++|+++++
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~n   94 (253)
T 2nm0_A           21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIAN   94 (253)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            5789999999999999999999999999999987644321      11 1235555423333333321  2368999998


Q ss_pred             CCc
Q 042426          158 VGG  160 (270)
Q Consensus       158 ~g~  160 (270)
                      +|.
T Consensus        95 Ag~   97 (253)
T 2nm0_A           95 AGV   97 (253)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            873

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.28  E-value=0.00083  Score=53.27  Aligned_cols=95  Identities=14%  Similarity=0.055  Sum_probs=68.1

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      .++.+||..|. |. |..+..+++.. |.+|++++.+++..+.++ +.+....+...+..++     ....+.||+|+..
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~d~~~~-----~~~~~~fD~v~~~  155 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAA-KRYPQVTFCVASSHRL-----PFSDTSMDAIIRI  155 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHH-HHCTTSEEEECCTTSC-----SBCTTCEEEEEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HhCCCcEEEEcchhhC-----CCCCCceeEEEEe
Confidence            57889999985 55 99999999886 779999999999999988 5443211211111011     0112369999975


Q ss_pred             CCcchHHHHHHccccCCEEEEEcc
Q 042426          158 VGGKMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       158 ~g~~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .....+..+.+.|+|+|+++....
T Consensus       156 ~~~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          156 YAPCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             SCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             CChhhHHHHHHhcCCCcEEEEEEc
Confidence            555689999999999999987643

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=97.27  E-value=0.0016  Score=51.31  Aligned_cols=95  Identities=18%  Similarity=0.149  Sum_probs=65.3

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCCccEE
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      ++++++||-.|.  |.|..++.+++ .|.+|++++.++...+.+++.   .+..  +..... ++.+.+   ..+.||+|
T Consensus       118 ~~~~~~VLDiGc--G~G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~-d~~~~~---~~~~fD~V  188 (254)
T 2nxc_A          118 LRPGDKVLDLGT--GSGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEG-SLEAAL---PFGPFDLL  188 (254)
T ss_dssp             CCTTCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEES-CHHHHG---GGCCEEEE
T ss_pred             cCCCCEEEEecC--CCcHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEEC-ChhhcC---cCCCCCEE
Confidence            578899999984  44777777766 577999999999888777633   2332  222222 343322   12469999


Q ss_pred             EeCCCc----chHHHHHHccccCCEEEEEcc
Q 042426          155 FENVGG----KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       155 ~d~~g~----~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +...-.    ..+..+.+.|+|+|+++..+.
T Consensus       189 v~n~~~~~~~~~l~~~~~~LkpgG~lils~~  219 (254)
T 2nxc_A          189 VANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             EEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EECCcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence            975532    366788889999999998765

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.26  E-value=0.0013  Score=53.04  Aligned_cols=93  Identities=16%  Similarity=0.083  Sum_probs=63.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      .+.+++|+|+ |++|.+++..+...|+ +|++..|+.++.+.+.++++..  .+++.  . +..+.+     +++|+|++
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~--~-~~~~~~-----~~aDivIn  210 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSL--A-EAETRL-----AEYDIIIN  210 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECH--H-HHHHTG-----GGCSEEEE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeH--H-HHHhhh-----ccCCEEEE
Confidence            5789999997 9999999999999998 9999999998887776577652  22211  1 222212     24999999


Q ss_pred             CCCcchH------HHHHHccccCCEEEEEcc
Q 042426          157 NVGGKML------DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       157 ~~g~~~~------~~~~~~l~~~G~~v~~g~  181 (270)
                      |++....      ......++++..++.+..
T Consensus       211 ~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          211 TTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             CSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             CCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            9985421      011234666666666644

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.26  E-value=0.0027  Score=52.29  Aligned_cols=75  Identities=12%  Similarity=0.115  Sum_probs=50.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHH------hCCC-ceeecCCchhHHHHHHhHcCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK----EKVDLLKHK------FGFD-DAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~----~~~~~~~~~------~g~~-~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.    ...+.+.+.      -+.. ...|..+. +   .+.+... 
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~---~~~~~~~-   99 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDL-T---TCEQVMK-   99 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCH-H---HHHHHTT-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCH-H---HHHHHhc-
Confidence            46899999999999999999988999999999843    344444311      1221 12344443 2   2333222 


Q ss_pred             CccEEEeCCCc
Q 042426          150 GIDIYFENVGG  160 (270)
Q Consensus       150 ~~d~v~d~~g~  160 (270)
                      ++|+||.+++.
T Consensus       100 ~~d~Vih~A~~  110 (351)
T 3ruf_A          100 GVDHVLHQAAL  110 (351)
T ss_dssp             TCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            59999999983

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.25  E-value=0.00013  Score=57.10  Aligned_cols=102  Identities=14%  Similarity=0.133  Sum_probs=64.4

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHH---HHHhHcC-CCccEE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDA---ALNRCFP-EGIDIY  154 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~---~i~~~~~-~~~d~v  154 (270)
                      ..+.+++|+||+|++|.++++.+...|++|+++++++++.+.   .. .....|..+.+++.+   .+.+..+ +++|++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~-~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l   80 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS---AS-VIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   80 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS---EE-EECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC---Cc-EEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            346789999999999999999999899999999987654220   00 001123333312222   2333332 469999


Q ss_pred             EeCCCc--------c----h---------------HHHHHHccccCCEEEEEccccc
Q 042426          155 FENVGG--------K----M---------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       155 ~d~~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      ++++|.        .    .               .+.++..+..+|+++.+++...
T Consensus        81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~  137 (241)
T 1dhr_A           81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  137 (241)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHH
Confidence            999882        1    0               1233445555789999887554

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.24  E-value=0.00021  Score=55.97  Aligned_cols=74  Identities=14%  Similarity=0.117  Sum_probs=48.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHH-----HHhHcC--CCccE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAA-----LNRCFP--EGIDI  153 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~-----i~~~~~--~~~d~  153 (270)
                      +.++||+||++++|.++++.+.. |.+|+++.+++++.+.+. +..-...+..    ++.+.     +.+...  +++|+
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~~----D~~~~~~~~~~~~~~~~~~~id~   78 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA-EIEGVEPIES----DIVKEVLEEGGVDKLKNLDHVDT   78 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH-TSTTEEEEEC----CHHHHHHTSSSCGGGTTCSCCSE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH-hhcCCcceec----ccchHHHHHHHHHHHHhcCCCCE
Confidence            57899999999999998887765 899999999998888776 3221111111    11111     111111  36899


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      +++++|.
T Consensus        79 lv~~Ag~   85 (245)
T 3e9n_A           79 LVHAAAV   85 (245)
T ss_dssp             EEECC--
T ss_pred             EEECCCc
Confidence            9999984

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.24  E-value=0.00036  Score=52.98  Aligned_cols=146  Identities=18%  Similarity=0.241  Sum_probs=86.2

Q ss_pred             CCCCCEEEecccceeeEe-ecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHH
Q 042426           20 YKKDDLVWGLTSWEEFSL-IQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVG   98 (270)
Q Consensus        20 ~~~Gd~V~~~g~~~~~~~-v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai   98 (270)
                      +++|+.+.....|.+|.. .+... .+.+ +..  +.+..+..+.. ......+..  .++++.+||-.|+  |.|..+.
T Consensus         6 ~~~~~~~~~~p~w~~~~~~~~~~~-~~~~-~~~--~~f~~~~~~~~-~~~~~~l~~--~~~~~~~vLDiG~--G~G~~~~   76 (205)
T 3grz_A            6 INLSRHLAIVPEWEDYQPVFKDQE-IIRL-DPG--LAFGTGNHQTT-QLAMLGIER--AMVKPLTVADVGT--GSGILAI   76 (205)
T ss_dssp             EEEETTEEEEETTCCCCCSSTTCE-EEEE-SCC-------CCHHHH-HHHHHHHHH--HCSSCCEEEEETC--TTSHHHH
T ss_pred             EEECCcEEEeccccccccCCCCce-eEEe-cCC--cccCCCCCccH-HHHHHHHHH--hccCCCEEEEECC--CCCHHHH
Confidence            455666666677888877 67777 7777 555  33322211111 111112211  2567899999984  4477777


Q ss_pred             HHHHHcCC-EEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc----hHHHHHHcc
Q 042426           99 QFVKLVGC-YVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK----MLDAVLLNM  170 (270)
Q Consensus        99 ~la~~~g~-~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~----~~~~~~~~l  170 (270)
                      .+++. +. +|++++.++...+.+++.   .+... +..... ++.+    ..++.||+|+......    .+..+.+.|
T Consensus        77 ~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~----~~~~~fD~i~~~~~~~~~~~~l~~~~~~L  149 (205)
T 3grz_A           77 AAHKL-GAKSVLATDISDESMTAAEENAALNGIYD-IALQKT-SLLA----DVDGKFDLIVANILAEILLDLIPQLDSHL  149 (205)
T ss_dssp             HHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEES-STTT----TCCSCEEEEEEESCHHHHHHHGGGSGGGE
T ss_pred             HHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEec-cccc----cCCCCceEEEECCcHHHHHHHHHHHHHhc
Confidence            77764 55 999999999888877733   24332 222111 2211    1234799998765543    356667789


Q ss_pred             ccCCEEEEEcc
Q 042426          171 RICGHIAVCGM  181 (270)
Q Consensus       171 ~~~G~~v~~g~  181 (270)
                      +++|+++..+.
T Consensus       150 ~~gG~l~~~~~  160 (205)
T 3grz_A          150 NEDGQVIFSGI  160 (205)
T ss_dssp             EEEEEEEEEEE
T ss_pred             CCCCEEEEEec
Confidence            99999987644

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.24  E-value=0.00082  Score=56.61  Aligned_cols=84  Identities=13%  Similarity=0.043  Sum_probs=56.3

Q ss_pred             cCC-CCCcEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHHHH----------------HHHHHHhCCC---ceeecC
Q 042426           76 CSP-KKGEYVYVSAASGAVGQLVGQFVKL-VGCYVVGSARSKEKV----------------DLLKHKFGFD---DAFNYK  134 (270)
Q Consensus        76 ~~~-~~g~~vlI~ga~g~vG~~ai~la~~-~g~~v~~~~~~~~~~----------------~~~~~~~g~~---~vi~~~  134 (270)
                      ..+ +.+.++||+||++|+|++++..+.. .|++|+++.++.+..                +.++ +.|..   ...|-.
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~-~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAK-AAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHH-hcCCcEEEEEecCC
Confidence            455 3578999999999999999888877 999999998754321                3344 55643   123444


Q ss_pred             Cchh---HHHHHHhHcCCCccEEEeCCCc
Q 042426          135 EEPD---LDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus       135 ~~~~---~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +.++   +.+.+.+..+|++|++++++|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            4422   2334444443579999999874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.23  E-value=0.00091  Score=59.52  Aligned_cols=104  Identities=17%  Similarity=0.192  Sum_probs=66.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHHH---hCCCceeecCCchh---HHHHHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK---------EKVDLLKHK---FGFDDAFNYKEEPD---LDAALN  144 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~---------~~~~~~~~~---~g~~~vi~~~~~~~---~~~~i~  144 (270)
                      .|.+++|+||++|+|.+.++.+...|++|++.+++.         ++.+.+.++   .|...+.|..+..+   +.+.+.
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            367899999999999999999999999999987643         333333222   34333445554323   333333


Q ss_pred             hHcCCCccEEEeCCCcc-----------h---------------HHHHHHcccc--CCEEEEEccccc
Q 042426          145 RCFPEGIDIYFENVGGK-----------M---------------LDAVLLNMRI--CGHIAVCGMISQ  184 (270)
Q Consensus       145 ~~~~~~~d~v~d~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  184 (270)
                      +.. |++|++++++|..           .               .+.++..|+.  +|++|.+++...
T Consensus        87 ~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag  153 (604)
T 2et6_A           87 KNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAG  153 (604)
T ss_dssp             HHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence            322 3699999999831           0               2445555643  589999887543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.23  E-value=0.00093  Score=54.85  Aligned_cols=78  Identities=13%  Similarity=0.081  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHhCCC---ceeecCCchhHHHHHHhHcCCCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV----DLLKHKFGFD---DAFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~----~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      .+.+|||+||+|.+|..+++.+...|++|++++++.++.    +.+.+..+..   ...|..+..++.+.+.+   +++|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d   80 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPIT   80 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCCc
Confidence            346899999999999999999998999999999765432    2222122322   12344444233333332   3599


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      +|+++++.
T Consensus        81 ~vih~A~~   88 (341)
T 3enk_A           81 AAIHFAAL   88 (341)
T ss_dssp             EEEECCCC
T ss_pred             EEEECccc
Confidence            99999973

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=97.23  E-value=0.00068  Score=55.58  Aligned_cols=100  Identities=18%  Similarity=0.115  Sum_probs=64.2

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CC--Cce--eecCCchhHHHHHHhHcCCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GF--DDA--FNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~--~~v--i~~~~~~~~~~~i~~~~~~~  150 (270)
                      .++.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+.+.+    +.  ..+  .|..+...+    .+... +
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~----~~~~~-~   83 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAY----DEVIK-G   83 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTT----TTTTT-T
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHH----HHHHc-C
Confidence            45679999999999999999988888999999999887766554222    21  111  244333122    22111 5


Q ss_pred             ccEEEeCCCcc---------------hHHHHHHccc--c-CCEEEEEcccc
Q 042426          151 IDIYFENVGGK---------------MLDAVLLNMR--I-CGHIAVCGMIS  183 (270)
Q Consensus       151 ~d~v~d~~g~~---------------~~~~~~~~l~--~-~G~~v~~g~~~  183 (270)
                      +|+||.+++..               .....++.+.  . .++++.+++..
T Consensus        84 ~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~  134 (342)
T 1y1p_A           84 AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV  134 (342)
T ss_dssp             CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred             CCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence            89999998731               0123334333  2 37899887654

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.23  E-value=0.0029  Score=49.68  Aligned_cols=101  Identities=14%  Similarity=0.113  Sum_probs=70.8

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh----CCCceeecCCchhHHHHHHhHc
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKF----GFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      ....+.++++||-.|+ | .|..+..+++..  +.+|+++..+++..+.+++.+    |.+.+ ..... ++.+.  ...
T Consensus        90 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~~--~~~  163 (258)
T 2pwy_A           90 TLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENV-RFHLG-KLEEA--ELE  163 (258)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCE-EEEES-CGGGC--CCC
T ss_pred             HHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCE-EEEEC-chhhc--CCC
Confidence            4567889999999984 4 588999999885  569999999999888887433    53322 22111 22111  011


Q ss_pred             CCCccEEEeCCCc--chHHHHHHccccCCEEEEEc
Q 042426          148 PEGIDIYFENVGG--KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       148 ~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  180 (270)
                      .+.+|+|+.....  ..+..+.+.|+++|+++.+.
T Consensus       164 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          164 EAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            2369999976654  47889999999999998764

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.23  E-value=0.001  Score=50.58  Aligned_cols=99  Identities=12%  Similarity=0.061  Sum_probs=67.8

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ....++++++||-.|+  |.|..+..+++. +.+|+++..+++..+.+++.+   +...+ ..... +..+....  .+.
T Consensus        71 ~~l~~~~~~~vLdiG~--G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~~--~~~  143 (210)
T 3lbf_A           71 ELLELTPQSRVLEIGT--GSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNV-STRHG-DGWQGWQA--RAP  143 (210)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES-CGGGCCGG--GCC
T ss_pred             HhcCCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCce-EEEEC-CcccCCcc--CCC
Confidence            4556789999999984  468888888887 889999999999888877433   44322 11111 22111111  236


Q ss_pred             ccEEEeCCCcc-hHHHHHHccccCCEEEEE
Q 042426          151 IDIYFENVGGK-MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       151 ~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~  179 (270)
                      ||+|+....-. ....+.+.|+|+|+++..
T Consensus       144 ~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~  173 (210)
T 3lbf_A          144 FDAIIVTAAPPEIPTALMTQLDEGGILVLP  173 (210)
T ss_dssp             EEEEEESSBCSSCCTHHHHTEEEEEEEEEE
T ss_pred             ccEEEEccchhhhhHHHHHhcccCcEEEEE
Confidence            99999876543 445788999999998865

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.22  E-value=0.0024  Score=46.96  Aligned_cols=102  Identities=15%  Similarity=0.245  Sum_probs=70.1

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---hCCC-ceeecCCchhHHHHHHhHcC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHK---FGFD-DAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~---~g~~-~vi~~~~~~~~~~~i~~~~~  148 (270)
                      ....+.++++||-.|+  |.|..+..+++.. +.+|++++.+++..+.+++.   .+.. .+ ....  +..+.+.. ..
T Consensus        19 ~~~~~~~~~~vldiG~--G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~--d~~~~~~~-~~   92 (178)
T 3hm2_A           19 SALAPKPHETLWDIGG--GSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQ--GAPRAFDD-VP   92 (178)
T ss_dssp             HHHCCCTTEEEEEEST--TTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEEC--CTTGGGGG-CC
T ss_pred             HHhcccCCCeEEEeCC--CCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEec--chHhhhhc-cC
Confidence            3446788999999984  4599999999887 56999999999888877733   3443 33 2222  22122222 11


Q ss_pred             CCccEEEeCCCc---chHHHHHHccccCCEEEEEcc
Q 042426          149 EGIDIYFENVGG---KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       149 ~~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +.||+|+.....   ..++.+.+.|+++|+++....
T Consensus        93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           93 DNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             SCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             CCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            469999976643   268999999999999987543

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.21  E-value=0.00073  Score=52.51  Aligned_cols=100  Identities=16%  Similarity=0.219  Sum_probs=68.9

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ....++++++||..|+  |.|..+..+++..+.+|+++..+++..+.+++.   .|... +..... +....+..  .++
T Consensus        85 ~~l~~~~~~~vLdiG~--G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~~~~~--~~~  158 (235)
T 1jg1_A           85 EIANLKPGMNILEVGT--GSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKN-VHVILG-DGSKGFPP--KAP  158 (235)
T ss_dssp             HHHTCCTTCCEEEECC--TTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCS-EEEEES-CGGGCCGG--GCC
T ss_pred             HhcCCCCCCEEEEEeC--CcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEEC-CcccCCCC--CCC
Confidence            4456888999999984  489999999988778999999999888777743   34433 222211 22111111  125


Q ss_pred             ccEEEeCCCcc-hHHHHHHccccCCEEEEE
Q 042426          151 IDIYFENVGGK-MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       151 ~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~  179 (270)
                      ||+|+.+..-. ....+.+.|+++|+++..
T Consensus       159 fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~  188 (235)
T 1jg1_A          159 YDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  188 (235)
T ss_dssp             EEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccEEEECCcHHHHHHHHHHhcCCCcEEEEE
Confidence            99999876643 557888999999998764

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=97.21  E-value=0.0019  Score=55.56  Aligned_cols=91  Identities=18%  Similarity=0.182  Sum_probs=68.8

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      -.|.+|.|.|. |.+|..+++.++.+|++|++..++..+..... ..|.. +.      ++.+.+.     ..|+|+-++
T Consensus       275 L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-~~G~~-~~------~l~ell~-----~aDiVi~~~  340 (494)
T 3d64_A          275 IAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEIDPICALQAA-MEGYR-VV------TMEYAAD-----KADIFVTAT  340 (494)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHTT-----TCSEEEECS
T ss_pred             cCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-HcCCE-eC------CHHHHHh-----cCCEEEECC
Confidence            46789999997 99999999999999999999999887653443 44542 11      3444333     389999998


Q ss_pred             Ccc--hHHHHHHccccCCEEEEEcccc
Q 042426          159 GGK--MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       159 g~~--~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +..  .-...++.|+++..++.++..+
T Consensus       341 ~t~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          341 GNYHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             SSSCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             CcccccCHHHHhhCCCCcEEEEcCCCc
Confidence            653  3357888999999999988743

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=97.21  E-value=0.00062  Score=54.45  Aligned_cols=95  Identities=24%  Similarity=0.307  Sum_probs=62.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +|||+||+|.+|..+++.+...  |.+|+++++++++.+.+. ..+... ..|..+..+    +.+... ++|+||.+++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~d~~~----l~~~~~-~~d~vi~~a~   75 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-DQGVEVRHGDYNQPES----LQKAFA-GVSKLLFISG   75 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-HTTCEEEECCTTCHHH----HHHHTT-TCSEEEECCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-hcCCeEEEeccCCHHH----HHHHHh-cCCEEEEcCC
Confidence            5899999999999999888777  899999999877666554 334431 234444312    333222 4899999987


Q ss_pred             cc--------hHHHHHHccccC--CEEEEEcccc
Q 042426          160 GK--------MLDAVLLNMRIC--GHIAVCGMIS  183 (270)
Q Consensus       160 ~~--------~~~~~~~~l~~~--G~~v~~g~~~  183 (270)
                      ..        .....++.+...  ++++.++...
T Consensus        76 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           76 PHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             CCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            41        123334444433  4888877644

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=97.21  E-value=0.0022  Score=54.18  Aligned_cols=85  Identities=12%  Similarity=0.033  Sum_probs=53.4

Q ss_pred             cCCCCCcEEEEecCCchHHHH--HHHHHHHcCCEEEEEeCCH---------------HHHHHHHHHhCCC---ceeecCC
Q 042426           76 CSPKKGEYVYVSAASGAVGQL--VGQFVKLVGCYVVGSARSK---------------EKVDLLKHKFGFD---DAFNYKE  135 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~--ai~la~~~g~~v~~~~~~~---------------~~~~~~~~~~g~~---~vi~~~~  135 (270)
                      ..+..|.++||+||++|+|++  .+..+...|++|+++.++.               +..+...++.|..   ...|..+
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd  134 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFS  134 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTC
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCC
Confidence            445678899999999999998  5555555699999988743               2222222245543   1235555


Q ss_pred             chhHHHHHHhHc--CCCccEEEeCCCc
Q 042426          136 EPDLDAALNRCF--PEGIDIYFENVGG  160 (270)
Q Consensus       136 ~~~~~~~i~~~~--~~~~d~v~d~~g~  160 (270)
                      .++..+.+.+..  .|++|++++++|.
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            423333333322  2479999999875

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.21  E-value=0.00013  Score=57.99  Aligned_cols=75  Identities=21%  Similarity=0.292  Sum_probs=50.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHH---HHHhHcCCCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDA---ALNRCFPEGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~---~i~~~~~~~~d~v~d  156 (270)
                      .|.+++|+||++++|.++++.+...|++|++++++.++.+... ..    ..|..+..+...   .+.+.. +++|++++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~----~~Dv~~~~~~~~~~~~~~~~~-g~iD~lvn  100 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-HL----PGDLREAAYADGLPGAVAAGL-GRLDIVVN  100 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-EC----CCCTTSHHHHHHHHHHHHHHH-SCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-cc----CcCCCCHHHHHHHHHHHHHhc-CCCCEEEE
Confidence            4678999999999999999999999999999998754432211 11    234444312222   222222 36999999


Q ss_pred             CCCc
Q 042426          157 NVGG  160 (270)
Q Consensus       157 ~~g~  160 (270)
                      ++|.
T Consensus       101 nAg~  104 (266)
T 3uxy_A          101 NAGV  104 (266)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9983

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=97.20  E-value=0.0021  Score=55.07  Aligned_cols=91  Identities=20%  Similarity=0.200  Sum_probs=68.9

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      -.|.+|.|.|. |.+|..+++.++.+|++|++..++..+..... ..|.. +.      ++.+.+.     ..|+|+-+.
T Consensus       255 l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-~~g~~-~~------~l~ell~-----~aDiVi~~~  320 (479)
T 1v8b_A          255 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFN-VV------TLDEIVD-----KGDFFITCT  320 (479)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHTT-----TCSEEEECC
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-HcCCE-ec------CHHHHHh-----cCCEEEECC
Confidence            46889999997 99999999999999999999999887654444 45542 11      3444333     389999997


Q ss_pred             Ccc--hHHHHHHccccCCEEEEEcccc
Q 042426          159 GGK--MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       159 g~~--~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +..  .-...++.|+++..++.++...
T Consensus       321 ~t~~lI~~~~l~~MK~gailiNvgrg~  347 (479)
T 1v8b_A          321 GNVDVIKLEHLLKMKNNAVVGNIGHFD  347 (479)
T ss_dssp             SSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             ChhhhcCHHHHhhcCCCcEEEEeCCCC
Confidence            654  2347788899999999988643

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=97.20  E-value=0.00034  Score=57.37  Aligned_cols=78  Identities=13%  Similarity=0.104  Sum_probs=51.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH---H-HHHHHHhC------CC---ceeecCCchhHHHHHHhHc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK---V-DLLKHKFG------FD---DAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~---~-~~~~~~~g------~~---~vi~~~~~~~~~~~i~~~~  147 (270)
                      +.+++|+|++|++|.++++.+...|++|+.+.++.++   . +.++ ..+      ..   ...|..+..++.+.+.+..
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWE-AARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHH-HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHH-HhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            5689999999999999999999999988777654322   2 2222 221      21   1235555534444454443


Q ss_pred             CCCccEEEeCCC
Q 042426          148 PEGIDIYFENVG  159 (270)
Q Consensus       148 ~~~~d~v~d~~g  159 (270)
                      .+.+|++++++|
T Consensus        81 ~g~iD~lVnnAG   92 (327)
T 1jtv_A           81 EGRVDVLVCNAG   92 (327)
T ss_dssp             TSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            347999999987

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=97.19  E-value=0.0014  Score=56.22  Aligned_cols=81  Identities=17%  Similarity=0.253  Sum_probs=54.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCC-ceeecCCchhHHHH---HHhHcCCCccE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE--KVDLLKHKFGFD-DAFNYKEEPDLDAA---LNRCFPEGIDI  153 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~--~~~~~~~~~g~~-~vi~~~~~~~~~~~---i~~~~~~~~d~  153 (270)
                      ++.++||+|+++++|..+++.+...|++|+++.++..  ..+...++.+.. ...|..+..+....   +.+..++.+|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            4679999999999999999988888999999987532  333333355543 22355554233333   33333334999


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      +++++|.
T Consensus       292 lV~nAGv  298 (454)
T 3u0b_A          292 LVNNAGI  298 (454)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999983

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.19  E-value=0.0041  Score=50.38  Aligned_cols=75  Identities=16%  Similarity=0.173  Sum_probs=52.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC---HHHHHHHHHHhCC----C-ceeecCCchhHHHHHHhHcCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARS---KEKVDLLKHKFGF----D-DAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~---~~~~~~~~~~~g~----~-~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+.++++.    . .+++..+.....+.+.+     
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~-----  220 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS-----  220 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH-----
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC-----
Confidence            4789999997 9999999999999999 89999999   7776665544432    1 23333331011233333     


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|+|++|++.
T Consensus       221 ~DiIINaTp~  230 (312)
T 3t4e_A          221 ADILTNGTKV  230 (312)
T ss_dssp             CSEEEECSST
T ss_pred             ceEEEECCcC
Confidence            8999999874

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.19  E-value=0.0022  Score=53.36  Aligned_cols=91  Identities=12%  Similarity=0.127  Sum_probs=65.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-  161 (270)
                      +|+|+|+ |.+|..+++.+.. ..+|.+.+++.++.+.++ +......+|..+.+.+.+.+.     ++|+|++|++.. 
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-~~~~~~~~d~~d~~~l~~~~~-----~~DvVi~~~p~~~   89 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-EFATPLKVDASNFDKLVEVMK-----EFELVIGALPGFL   89 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-TTSEEEECCTTCHHHHHHHHT-----TCSEEEECCCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-ccCCcEEEecCCHHHHHHHHh-----CCCEEEEecCCcc
Confidence            7999998 9999998887753 568999999998888876 443333455555423333333     389999999864 


Q ss_pred             hHHHHHHccccCCEEEEEcc
Q 042426          162 MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       162 ~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ....+-.|+..+-.++.+..
T Consensus        90 ~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           90 GFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             HHHHHHHHHHHTCEEEECCC
T ss_pred             cchHHHHHHhcCcceEeeec
Confidence            44555567777888988754

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.18  E-value=0.00034  Score=54.78  Aligned_cols=100  Identities=16%  Similarity=0.127  Sum_probs=63.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHH-HHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKL-VGCYVVGSARSKE-KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~-~g~~v~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      ++.++||+||++++|.++++.+.. .|++|++..++++ ..+.+.     ....|..+.++..+.+.....+++|+++++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~-----~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLK-----FIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTEE-----EEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccce-----EEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            457899999999999998877765 7889998887643 111110     112355554344444433333379999999


Q ss_pred             CCcc-----------h---------------HHHHHHccccCCEEEEEccccc
Q 042426          158 VGGK-----------M---------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       158 ~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      +|..           .               .+.++..+.++|+++.+++...
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  130 (244)
T 4e4y_A           78 AGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC  130 (244)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG
T ss_pred             CccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH
Confidence            9841           1               1223334555789998877554

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=97.18  E-value=0.00098  Score=50.13  Aligned_cols=102  Identities=17%  Similarity=0.166  Sum_probs=67.9

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCC
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ..++++++||-.|  +|.|..+..+++..+  .+|++++.+++..+.+++.   .|...-+..... ++.. +....++.
T Consensus        18 ~~~~~~~~vLDlG--cG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~-~~~~~~~~   93 (197)
T 3eey_A           18 MFVKEGDTVVDAT--CGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD-GHQN-MDKYIDCP   93 (197)
T ss_dssp             HHCCTTCEEEESC--CTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS-CGGG-GGGTCCSC
T ss_pred             hcCCCCCEEEEcC--CCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHHH-HhhhccCC
Confidence            3578889999998  455888888998864  5999999999888777633   233111222222 2211 11122347


Q ss_pred             ccEEEeCCCc----------------chHHHHHHccccCCEEEEEcc
Q 042426          151 IDIYFENVGG----------------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       151 ~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ||+|+...+-                ..+..+.+.|+++|+++....
T Consensus        94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            9999865532                367889999999999987654

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.17  E-value=0.0052  Score=43.13  Aligned_cols=75  Identities=16%  Similarity=0.147  Sum_probs=53.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      .+|+|.|+ |.+|...++.+...|.+|+++++++++.+.+.+.++...+ .|..+.    +.+.+..-.++|+|+-+++.
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~----~~l~~~~~~~~d~vi~~~~~   79 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKI----KTLEDAGIEDADMYIAVTGK   79 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSH----HHHHHTTTTTCSEEEECCSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCH----HHHHHcCcccCCEEEEeeCC
Confidence            47999997 9999999999988899999999998888877644565322 122222    12222212369999999986


Q ss_pred             c
Q 042426          161 K  161 (270)
Q Consensus       161 ~  161 (270)
                      .
T Consensus        80 ~   80 (140)
T 1lss_A           80 E   80 (140)
T ss_dssp             H
T ss_pred             c
Confidence            4

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.17  E-value=0.0095  Score=42.77  Aligned_cols=94  Identities=7%  Similarity=-0.009  Sum_probs=60.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHh--CCCce-eecCCchhHHHHHHhHcCCCccEEEe
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKHKF--GFDDA-FNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~~~--g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      ..+++|.|+ |.+|...++.+...|.+|+++.++ +++.+.+.+.+  |...+ -|..+.    +.+.+..-.++|.|+-
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~----~~l~~a~i~~ad~vi~   77 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDS----SVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSH----HHHHHHTTTTCSEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCH----HHHHHcChhhCCEEEE
Confidence            357999997 999999999999999999999986 46565555333  33222 122222    2344332236999999


Q ss_pred             CCCcchHH----HHHHccccCCEEEEE
Q 042426          157 NVGGKMLD----AVLLNMRICGHIAVC  179 (270)
Q Consensus       157 ~~g~~~~~----~~~~~l~~~G~~v~~  179 (270)
                      +++....+    ...+.+.+..+++..
T Consensus        78 ~~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           78 LSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             ecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            99875322    333444455566653

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.17  E-value=0.0057  Score=46.55  Aligned_cols=89  Identities=12%  Similarity=0.072  Sum_probs=60.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-----CCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG-----FDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g-----~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      +|+|+|++|.+|...+..+...|.+|++..+++++.+.+.+.++     .+  +..  . ++.+.+.+     +|+|+.|
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~~~-----~D~Vi~~   71 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS--ITG--M-KNEDAAEA-----CDIAVLT   71 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC--EEE--E-EHHHHHHH-----CSEEEEC
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCC--CCh--h-hHHHHHhc-----CCEEEEe
Confidence            58999977999999998888889999999999888777664444     11  111  2 44444443     8999999


Q ss_pred             CCcchHHHHHHccc---cCCEEEEEcc
Q 042426          158 VGGKMLDAVLLNMR---ICGHIAVCGM  181 (270)
Q Consensus       158 ~g~~~~~~~~~~l~---~~G~~v~~g~  181 (270)
                      +........+..+.   ++..++.+..
T Consensus        72 ~~~~~~~~~~~~l~~~~~~~~vi~~~~   98 (212)
T 1jay_A           72 IPWEHAIDTARDLKNILREKIVVSPLV   98 (212)
T ss_dssp             SCHHHHHHHHHHTHHHHTTSEEEECCC
T ss_pred             CChhhHHHHHHHHHHHcCCCEEEEcCC
Confidence            98754444443222   3555665543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.16  E-value=0.0013  Score=53.07  Aligned_cols=91  Identities=14%  Similarity=0.166  Sum_probs=58.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-------HHHHHHHH--HhCCCc-eeecCCchhHHHHHHhHcCCCc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK-------EKVDLLKH--KFGFDD-AFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~-------~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      .+|+|+||+|.+|..+++.+...|.+|++++|++       ++.+.+++  ..+... ..|..+.+++.+.+.     ++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----~~   77 (307)
T 2gas_A            3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK-----QV   77 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-----TC
T ss_pred             cEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh-----CC
Confidence            5799999999999999998888899999999876       55444431  234431 235554423333332     49


Q ss_pred             cEEEeCCCcc---hHHHHHHccccC---CEEE
Q 042426          152 DIYFENVGGK---MLDAVLLNMRIC---GHIA  177 (270)
Q Consensus       152 d~v~d~~g~~---~~~~~~~~l~~~---G~~v  177 (270)
                      |+||.+++..   .....++.++..   .+++
T Consensus        78 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           78 DIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             SEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             CEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            9999999852   233444444432   4666

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.15  E-value=0.0024  Score=51.62  Aligned_cols=92  Identities=15%  Similarity=0.177  Sum_probs=59.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH--HhCCC-ceeecCCchhHHHHHHhHcCCCccE
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-----KEKVDLLKH--KFGFD-DAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-----~~~~~~~~~--~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      .+|+|+||+|.+|..+++.+...|.+|++++|+     +++.+.+++  ..+.. ...|..+..++.+.+.     ++|+
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-----~~d~   79 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-----QVDV   79 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-----TCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh-----CCCE
Confidence            469999999999999999888889999999987     445444431  22332 1235544423333332     4999


Q ss_pred             EEeCCCcc-------hHHHHHHccccC---CEEEE
Q 042426          154 YFENVGGK-------MLDAVLLNMRIC---GHIAV  178 (270)
Q Consensus       154 v~d~~g~~-------~~~~~~~~l~~~---G~~v~  178 (270)
                      ||.+++..       .....++.++..   ++++.
T Consensus        80 vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~  114 (313)
T 1qyd_A           80 VISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP  114 (313)
T ss_dssp             EEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred             EEECCccccchhhHHHHHHHHHHHHhcCCCceEEe
Confidence            99998742       234444544443   37763

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.12  E-value=0.00067  Score=50.95  Aligned_cols=97  Identities=14%  Similarity=0.095  Sum_probs=63.4

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHHhCCCcee---ecCCchhHHHH
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVG----------CYVVGSARSKEKVDLLKHKFGFDDAF---NYKEEPDLDAA  142 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g----------~~v~~~~~~~~~~~~~~~~~g~~~vi---~~~~~~~~~~~  142 (270)
                      ..++++++||.+|+ |+ |..+..+++..|          .+|++++.++...     .-++ ..+   |..+. +....
T Consensus        18 ~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~-~~~~~~d~~~~-~~~~~   88 (196)
T 2nyu_A           18 QILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGA-TFLCPADVTDP-RTSQR   88 (196)
T ss_dssp             CCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTC-EEECSCCTTSH-HHHHH
T ss_pred             CCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCC-eEEEeccCCCH-HHHHH
Confidence            44688999999995 54 999999999876          7899999876320     0011 112   22222 34444


Q ss_pred             HHhHcCC-CccEEEe-----CCCc-------------chHHHHHHccccCCEEEEEcc
Q 042426          143 LNRCFPE-GIDIYFE-----NVGG-------------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       143 i~~~~~~-~~d~v~d-----~~g~-------------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +.+..++ .||+|+.     +++.             ..+..+.+.|+|+|+++....
T Consensus        89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (196)
T 2nyu_A           89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW  146 (196)
T ss_dssp             HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence            4444444 7999994     3332             346678889999999987533

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=97.09  E-value=0.0028  Score=50.25  Aligned_cols=97  Identities=21%  Similarity=0.183  Sum_probs=66.2

Q ss_pred             ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhH
Q 042426           60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDL  139 (270)
Q Consensus        60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  139 (270)
                      -+||....+..++.+..---.|.+++|.|+++-+|..+++++...|++|++.-+.                    .. ++
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------------t~-~L  198 (285)
T 3l07_A          140 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF--------------------TT-DL  198 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------------CS-SH
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC--------------------ch-hH
Confidence            3454444455555443333478899999986669999999999999998776432                    11 44


Q ss_pred             HHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccc
Q 042426          140 DAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       140 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      .+.+++     +|+++.++|.+.+ -.-+.++++..++.+|...
T Consensus       199 ~~~~~~-----ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          199 KSHTTK-----ADILIVAVGKPNF-ITADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             HHHHTT-----CSEEEECCCCTTC-BCGGGSCTTCEEEECCCEE
T ss_pred             HHhccc-----CCEEEECCCCCCC-CCHHHcCCCcEEEEecccC
Confidence            444443     8999999987633 2335678888988888643

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=97.09  E-value=0.0072  Score=49.00  Aligned_cols=102  Identities=10%  Similarity=0.059  Sum_probs=68.8

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      .++++++||-.|  +|.|..+..+++..|++|++++.+++..+.+++.   .|...-+..... ++.+ + ....+.||+
T Consensus       114 ~~~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~-~-~~~~~~fD~  188 (312)
T 3vc1_A          114 QAGPDDTLVDAG--CGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVC-NMLD-T-PFDKGAVTA  188 (312)
T ss_dssp             CCCTTCEEEEES--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-CTTS-C-CCCTTCEEE
T ss_pred             cCCCCCEEEEec--CCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC-Chhc-C-CCCCCCEeE
Confidence            378899999998  5678888889888799999999999888777633   343211111111 1110 0 011237999


Q ss_pred             EEeCCC------cchHHHHHHccccCCEEEEEcccc
Q 042426          154 YFENVG------GKMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       154 v~d~~g------~~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      |+....      ...+..+.+.|+|+|+++......
T Consensus       189 V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~  224 (312)
T 3vc1_A          189 SWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW  224 (312)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred             EEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence            987433      237888999999999999876533

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=97.09  E-value=0.0021  Score=49.82  Aligned_cols=100  Identities=13%  Similarity=0.118  Sum_probs=67.1

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCC-Cce--eecCCchhHHHHHHhHcCC
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFGF-DDA--FNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g~-~~v--i~~~~~~~~~~~i~~~~~~  149 (270)
                      ...++||++||=.|  +|.|..+..+++..|-  +|+++..+++-.+.+++.... .++  +..... +. .... ...+
T Consensus        72 ~l~ikpG~~VldlG--~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~-~p-~~~~-~~~~  146 (233)
T 4df3_A           72 ELPVKEGDRILYLG--IASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDAR-FP-EKYR-HLVE  146 (233)
T ss_dssp             CCCCCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTT-CG-GGGT-TTCC
T ss_pred             hcCCCCCCEEEEec--CcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEecc-Cc-cccc-cccc
Confidence            35689999999998  6778888999998875  899999999988887744322 122  111111 11 0111 1112


Q ss_pred             CccEEEeCCCcc-----hHHHHHHccccCCEEEEE
Q 042426          150 GIDIYFENVGGK-----MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       150 ~~d~v~d~~g~~-----~~~~~~~~l~~~G~~v~~  179 (270)
                      .+|+||.....+     .+..+.+.|+|+|+++..
T Consensus       147 ~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          147 GVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            589888655432     567788899999998864

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.09  E-value=0.0015  Score=54.54  Aligned_cols=83  Identities=11%  Similarity=0.025  Sum_probs=53.9

Q ss_pred             cCC-CCCcEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHHH----------------HHHHHHHhCCC---ceeecC
Q 042426           76 CSP-KKGEYVYVSAASGAVGQLVGQFVKL-VGCYVVGSARSKEK----------------VDLLKHKFGFD---DAFNYK  134 (270)
Q Consensus        76 ~~~-~~g~~vlI~ga~g~vG~~ai~la~~-~g~~v~~~~~~~~~----------------~~~~~~~~g~~---~vi~~~  134 (270)
                      ..+ ..+.++||+||++|+|++.++.+.. .|++|+++.++.+.                .+.++ +.|..   ...|..
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~-~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAA-QKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHH-hcCCceEEEECCCC
Confidence            444 4567899999999999998888877 99999988765332                11333 45543   123444


Q ss_pred             CchhHHHHH---HhHcCCCccEEEeCCCc
Q 042426          135 EEPDLDAAL---NRCFPEGIDIYFENVGG  160 (270)
Q Consensus       135 ~~~~~~~~i---~~~~~~~~d~v~d~~g~  160 (270)
                      +..+..+.+   .+.. |++|++++++|.
T Consensus       120 d~~~v~~~v~~i~~~~-G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQDL-GQVDQVIYSLAS  147 (405)
T ss_dssp             SHHHHHHHHHHHHHHT-SCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHc-CCCCEEEEcCcc
Confidence            442333333   3322 479999999874

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=97.08  E-value=0.0043  Score=53.75  Aligned_cols=78  Identities=21%  Similarity=0.254  Sum_probs=53.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHH---H----HHHHHHHhCCC---ceeecCCchhHHHHHHhHcC-C
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKE---K----VDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP-E  149 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~---~----~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~-~  149 (270)
                      .++||+|++|++|..+++.+...|+ +|+.+.++..   .    .+.++ ..|..   ...|..+..++.+.+.+... +
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELE-QLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            8999999999999999998888899 8888887632   1    22333 45653   12355554344444444332 3


Q ss_pred             CccEEEeCCCc
Q 042426          150 GIDIYFENVGG  160 (270)
Q Consensus       150 ~~d~v~d~~g~  160 (270)
                      ++|++|++.|.
T Consensus       319 ~ld~vVh~AGv  329 (496)
T 3mje_A          319 PLTAVFHSAGV  329 (496)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCeEEEECCcc
Confidence            79999999883

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.07  E-value=0.0002  Score=55.88  Aligned_cols=98  Identities=17%  Similarity=0.181  Sum_probs=61.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      +.+++|+||+|++|..+++.+...|.  +|+++++++++.+... .-+.. ...|..+.++    +.+... ++|+++++
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~----~~~~~~-~~d~vi~~   91 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDD----YASAFQ-GHDVGFCC   91 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGG----GGGGGS-SCSEEEEC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCceEEecCcCCHHH----HHHHhc-CCCEEEEC
Confidence            46899999999999999998888899  9999998765433221 11221 1123333212    222222 59999999


Q ss_pred             CCcch---------------HHHHHHccccC--CEEEEEccccc
Q 042426          158 VGGKM---------------LDAVLLNMRIC--GHIAVCGMISQ  184 (270)
Q Consensus       158 ~g~~~---------------~~~~~~~l~~~--G~~v~~g~~~~  184 (270)
                      +|...               ....++.+...  ++++.++....
T Consensus        92 ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           92 LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             CCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             CCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence            98421               12233334332  68998887554

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=97.07  E-value=0.0043  Score=54.02  Aligned_cols=78  Identities=19%  Similarity=0.266  Sum_probs=54.1

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHH---H----HHHHHHhCCCc---eeecCCchhHHHHHHhH
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEK---V----DLLKHKFGFDD---AFNYKEEPDLDAALNRC  146 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~---~----~~~~~~~g~~~---vi~~~~~~~~~~~i~~~  146 (270)
                      ++++.++||+|++|++|..+++.+...|+ +|+++.++..+   .    +.++ ..|...   ..|..+..++.+.+.+ 
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELR-GHGCEVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-TTTCEEEEEECCSSCHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHhc-
Confidence            56788999999999999999998888899 68888887531   2    2222 335421   1355554234444443 


Q ss_pred             cCCCccEEEeCCC
Q 042426          147 FPEGIDIYFENVG  159 (270)
Q Consensus       147 ~~~~~d~v~d~~g  159 (270)
                        +.+|+||++.|
T Consensus       334 --~~ld~VVh~AG  344 (511)
T 2z5l_A          334 --YPPNAVFHTAG  344 (511)
T ss_dssp             --SCCSEEEECCC
T ss_pred             --CCCcEEEECCc
Confidence              46999999998

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.06  E-value=0.0037  Score=49.75  Aligned_cols=102  Identities=18%  Similarity=0.147  Sum_probs=70.7

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh----C--CCceeecCCchhHHHHHHh
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKF----G--FDDAFNYKEEPDLDAALNR  145 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~----g--~~~vi~~~~~~~~~~~i~~  145 (270)
                      ....+.++++||-.|+  |.|..+..+++..  +.+|+++..+++..+.+++.+    |  .+++ ..... ++.+.  .
T Consensus        93 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v-~~~~~-d~~~~--~  166 (280)
T 1i9g_A           93 HEGDIFPGARVLEAGA--GSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNW-RLVVS-DLADS--E  166 (280)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTE-EEECS-CGGGC--C
T ss_pred             HHcCCCCCCEEEEEcc--cccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcE-EEEEC-chHhc--C
Confidence            4567889999999984  4888899999875  469999999998888777433    4  3322 22111 22111  0


Q ss_pred             HcCCCccEEEeCCCc--chHHHHHHccccCCEEEEEcc
Q 042426          146 CFPEGIDIYFENVGG--KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       146 ~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ...+.+|+|+.....  ..+..+.+.|+++|+++....
T Consensus       167 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          167 LPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence            112369999876654  478899999999999988643

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=97.06  E-value=0.0013  Score=51.69  Aligned_cols=101  Identities=13%  Similarity=0.140  Sum_probs=67.9

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ....+.++.+||-.|  +|.|..+..+++..|.+|++++.+++..+.+++.   .|...-+..... ++.+..   ..+.
T Consensus        30 ~~~~~~~~~~VLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~-d~~~~~---~~~~  103 (256)
T 1nkv_A           30 RVLRMKPGTRILDLG--SGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-DAAGYV---ANEK  103 (256)
T ss_dssp             HHTCCCTTCEEEEET--CTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CCTTCC---CSSC
T ss_pred             HhcCCCCCCEEEEEC--CCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC-ChHhCC---cCCC
Confidence            455688999999998  4558888999988899999999999887777633   343211111111 111100   1236


Q ss_pred             ccEEEeCCC-----c--chHHHHHHccccCCEEEEEc
Q 042426          151 IDIYFENVG-----G--KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       151 ~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g  180 (270)
                      ||+|+....     .  ..+..+.+.|+|+|+++...
T Consensus       104 fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          104 CDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             EEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             CCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            999986322     1  25788889999999998754

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=97.05  E-value=0.0053  Score=45.53  Aligned_cols=101  Identities=21%  Similarity=0.237  Sum_probs=68.8

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ....+.++.+||-.|+  |.|..+..+++.. .+|+++..+++..+.+++.   .+...-+..... ++.+.+...  +.
T Consensus        27 ~~~~~~~~~~vldiG~--G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~--~~  100 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVGC--GTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCKI--PD  100 (192)
T ss_dssp             HHHCCCTTCEEEEESC--TTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTTS--CC
T ss_pred             HhcCCCCCCEEEEECC--CCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-CHHHhcccC--CC
Confidence            4456788999999984  4488888888766 8999999999888877742   344111222222 444433221  26


Q ss_pred             ccEEEeCCC----cchHHHHHHccccCCEEEEEc
Q 042426          151 IDIYFENVG----GKMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       151 ~d~v~d~~g----~~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +|+|+....    ...+..+.+.|+++|+++...
T Consensus       101 ~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A          101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            999997654    236788889999999988753

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=97.05  E-value=0.0032  Score=51.67  Aligned_cols=87  Identities=15%  Similarity=0.215  Sum_probs=65.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|...++.++.+|.+|++..++..+ +.+. +.|+..    .   ++.+.+.+     .|+|+.++.
T Consensus       164 ~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~ell~~-----aDvV~l~~P  228 (335)
T 2g76_A          164 NGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPIISP-EVSA-SFGVQQ----L---PLEEIWPL-----CDFITVHTP  228 (335)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSCH-HHHH-HTTCEE----C---CHHHHGGG-----CSEEEECCC
T ss_pred             CcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCcee----C---CHHHHHhc-----CCEEEEecC
Confidence            4779999997 999999999999999999999987655 3444 677631    1   34443433     899999886


Q ss_pred             cc-----hH-HHHHHccccCCEEEEEcc
Q 042426          160 GK-----ML-DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~~-----~~-~~~~~~l~~~G~~v~~g~  181 (270)
                      ..     .+ ...+..|++++.++.++.
T Consensus       229 ~t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          229 LLPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             CCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            42     22 467889999999999876

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=97.04  E-value=0.0016  Score=53.40  Aligned_cols=76  Identities=16%  Similarity=0.243  Sum_probs=51.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHhCC----C-ceeecCCchhHHHHHHhHcCCCccE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV--DLLKHKFGF----D-DAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~--~~~~~~~g~----~-~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      +.+|||+||+|.+|..+++.+...|.+|+++++++++.  +.+. .++.    . ...|..+..++.+.+...   ++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLK-ELGIENDVKIIHMDLLEFSNIIRTIEKV---QPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHH-HTTCTTTEEECCCCTTCHHHHHHHHHHH---CCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHh-hccccCceeEEECCCCCHHHHHHHHHhc---CCCE
Confidence            46899999999999999998888899999999876542  2333 3321    1 113444442343444332   4799


Q ss_pred             EEeCCCc
Q 042426          154 YFENVGG  160 (270)
Q Consensus       154 v~d~~g~  160 (270)
                      ||.+++.
T Consensus        79 vih~A~~   85 (345)
T 2z1m_A           79 VYNLAAQ   85 (345)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=97.03  E-value=0.0038  Score=49.53  Aligned_cols=96  Identities=20%  Similarity=0.115  Sum_probs=67.1

Q ss_pred             ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhH
Q 042426           60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDL  139 (270)
Q Consensus        60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  139 (270)
                      -+||.......+|.+..---.|.+++|.|.++-+|..++.++...|++|++..+..                    . ++
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T--------------------~-~L  198 (286)
T 4a5o_A          140 LRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT--------------------R-DL  198 (286)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC--------------------S-CH
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC--------------------c-CH
Confidence            34544445555554433334789999999977799999999999999988775321                    1 44


Q ss_pred             HHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEccc
Q 042426          140 DAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       140 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      .+.+++     +|+++.++|.+.+ -.-+.++++..++.+|..
T Consensus       199 ~~~~~~-----ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  235 (286)
T 4a5o_A          199 ADHVSR-----ADLVVVAAGKPGL-VKGEWIKEGAIVIDVGIN  235 (286)
T ss_dssp             HHHHHT-----CSEEEECCCCTTC-BCGGGSCTTCEEEECCSC
T ss_pred             HHHhcc-----CCEEEECCCCCCC-CCHHHcCCCeEEEEeccc
Confidence            444544     8999999997633 223567899999998874

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.03  E-value=0.0026  Score=51.15  Aligned_cols=95  Identities=20%  Similarity=0.090  Sum_probs=60.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHH--HHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKV--DLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~--~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      ..+|+|+||+|.+|..+++.+...| .+|++++|++++.  +.+. ..+... ..|..+..++.+.+.     ++|.||.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-~~~~~~~~~D~~d~~~l~~~~~-----~~d~vi~   78 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQVIMELALN-----GAYATFI   78 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-HTTCEEEECCTTCHHHHHHHHT-----TCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-HCCCEEEEecCCCHHHHHHHHh-----cCCEEEE
Confidence            3689999999999999998887778 8999999886653  2333 335432 234544423333332     4899999


Q ss_pred             CCCcc----------hHHHHHHcccc-C-CEEEEEcc
Q 042426          157 NVGGK----------MLDAVLLNMRI-C-GHIAVCGM  181 (270)
Q Consensus       157 ~~g~~----------~~~~~~~~l~~-~-G~~v~~g~  181 (270)
                      +++..          .....++.++. + ++++..+.
T Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~  115 (299)
T 2wm3_A           79 VTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL  115 (299)
T ss_dssp             CCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             eCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence            98731          12233444433 3 57887554

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.02  E-value=0.005  Score=52.93  Aligned_cols=93  Identities=17%  Similarity=0.191  Sum_probs=62.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +.+|+|+|+ |++|..++..+... |.+|++..|+.++.+.+.+..+... .+|..+..++.+.+.     ++|+|++|+
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~-----~~DvVIn~t   96 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA-----DNDVVISLI   96 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH-----TSSEEEECS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc-----CCCEEEECC
Confidence            468999997 99999999888777 6799999999888877763434321 234443323333332     499999999


Q ss_pred             Ccch-HHHHHHccccCCEEEEE
Q 042426          159 GGKM-LDAVLLNMRICGHIAVC  179 (270)
Q Consensus       159 g~~~-~~~~~~~l~~~G~~v~~  179 (270)
                      +... ......++.++-.++..
T Consensus        97 p~~~~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A           97 PYTFHPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             CGGGHHHHHHHHHHHTCEEEEC
T ss_pred             chhhhHHHHHHHHhcCCEEEEe
Confidence            8642 22344456666666654

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=97.01  E-value=0.00086  Score=55.05  Aligned_cols=96  Identities=17%  Similarity=0.140  Sum_probs=59.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      +|||+||+|.+|..+++.+...|.+|+++++++.+.+.+. ..+... ..|..+.    +.+.+... ++|+||.+++..
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~Dl~d~----~~~~~~~~-~~d~vih~a~~~   88 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-YLEPECRVAEMLDH----AGLERALR-GLDGVIFSAGYY   88 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-GGCCEEEECCTTCH----HHHHHHTT-TCSEEEEC----
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-cCCeEEEEecCCCH----HHHHHHHc-CCCEEEECCccC
Confidence            7999999999999999998888999999998876544333 223321 2244443    12333222 499999998731


Q ss_pred             h----------------HHHHHHcccc-C-CEEEEEccccc
Q 042426          162 M----------------LDAVLLNMRI-C-GHIAVCGMISQ  184 (270)
Q Consensus       162 ~----------------~~~~~~~l~~-~-G~~v~~g~~~~  184 (270)
                      .                ....++.+.+ + ++++.++....
T Consensus        89 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~  129 (342)
T 2x4g_A           89 PSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYA  129 (342)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGG
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHh
Confidence            1                1233333333 3 68998876543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=97.00  E-value=0.0039  Score=53.94  Aligned_cols=81  Identities=17%  Similarity=0.210  Sum_probs=55.2

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHH---H----HHHHHHhCCC---ceeecCCchhHHHHHHhH
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEK---V----DLLKHKFGFD---DAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~---~----~~~~~~~g~~---~vi~~~~~~~~~~~i~~~  146 (270)
                      ++++.++||+||+|++|..+++.+...|+ +|+++.++...   .    +.++ ..|..   ...|..+..++...+.+.
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            56788999999999999999988887899 59999987641   2    2233 44543   123555542444444443


Q ss_pred             cC-CCccEEEeCCC
Q 042426          147 FP-EGIDIYFENVG  159 (270)
Q Consensus       147 ~~-~~~d~v~d~~g  159 (270)
                      .. +.+|.||.+.|
T Consensus       302 ~~~g~ld~VIh~AG  315 (486)
T 2fr1_A          302 GDDVPLSAVFHAAA  315 (486)
T ss_dssp             CTTSCEEEEEECCC
T ss_pred             HhcCCCcEEEECCc
Confidence            21 26899999998

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.98  E-value=0.0055  Score=49.79  Aligned_cols=87  Identities=16%  Similarity=0.130  Sum_probs=66.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|...++.++..|++|++..++.++. .+. +.|...    .   ++.+.+.+     .|+|+.++.
T Consensus       141 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~g~~~----~---~l~ell~~-----aDvVvl~~P  205 (313)
T 2ekl_A          141 AGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIRE-KAE-KINAKA----V---SLEELLKN-----SDVISLHVT  205 (313)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHH-HTTCEE----C---CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcchh-HHH-hcCcee----c---CHHHHHhh-----CCEEEEecc
Confidence            4789999997 9999999999999999999999877654 344 677541    1   34444443     899999887


Q ss_pred             cc-----hH-HHHHHccccCCEEEEEcc
Q 042426          160 GK-----ML-DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~~-----~~-~~~~~~l~~~G~~v~~g~  181 (270)
                      ..     .+ ...+..+++++.++.++.
T Consensus       206 ~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          206 VSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             CChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            42     22 567788999999998876

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.98  E-value=0.0035  Score=54.79  Aligned_cols=83  Identities=11%  Similarity=-0.003  Sum_probs=54.5

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCE-EEEE-eCCH-------------HH----HHHHHHHhCCC---ceeecC
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGS-ARSK-------------EK----VDLLKHKFGFD---DAFNYK  134 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~-~~~~-------------~~----~~~~~~~~g~~---~vi~~~  134 (270)
                      .++++.++||+||+|++|..+++.+...|++ ++.+ .++.             ++    .+.++ ..|..   ...|..
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dvt  325 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-DLGATATVVTCDLT  325 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHH-HHTCEEEEEECCTT
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH-hcCCEEEEEECCCC
Confidence            3567889999999999999999888888986 6666 6662             22    23333 44653   123555


Q ss_pred             CchhHHHHHHhHcC-CCccEEEeCCCc
Q 042426          135 EEPDLDAALNRCFP-EGIDIYFENVGG  160 (270)
Q Consensus       135 ~~~~~~~~i~~~~~-~~~d~v~d~~g~  160 (270)
                      +..+....+.+... +++|.||+++|.
T Consensus       326 d~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          326 DAEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             SHHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCcC
Confidence            55344444444332 378999999983

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.98  E-value=0.051  Score=44.59  Aligned_cols=89  Identities=15%  Similarity=0.266  Sum_probs=59.8

Q ss_pred             cEEEEecCCchHHHHHHHHHH-H-cCCEEEE-EeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVK-L-VGCYVVG-SARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~-~-~g~~v~~-~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      -+|.|+|+ |.+|...++.++ . -++++++ .++++++.+.+.+++|...+++     ++.+.+.+   .++|+|+.|+
T Consensus         9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~-----~~~~~l~~---~~~D~V~i~t   79 (346)
T 3cea_A            9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT-----NYKDMIDT---ENIDAIFIVA   79 (346)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES-----CHHHHHTT---SCCSEEEECS
T ss_pred             ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC-----CHHHHhcC---CCCCEEEEeC
Confidence            47999997 999998888776 4 3677655 4567777766654778754432     44443321   2599999999


Q ss_pred             Ccc-hHHHHHHccccCCEEEEEc
Q 042426          159 GGK-MLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       159 g~~-~~~~~~~~l~~~G~~v~~g  180 (270)
                      ... ....+..+++.+-. |.+.
T Consensus        80 p~~~h~~~~~~al~~G~~-v~~e  101 (346)
T 3cea_A           80 PTPFHPEMTIYAMNAGLN-VFCE  101 (346)
T ss_dssp             CGGGHHHHHHHHHHTTCE-EEEC
T ss_pred             ChHhHHHHHHHHHHCCCE-EEEc
Confidence            875 66777777777544 4443

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.98  E-value=0.0051  Score=45.58  Aligned_cols=100  Identities=13%  Similarity=0.152  Sum_probs=66.5

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCCcc
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      ..++++++||-.|  +|.|..+..+++. +.+|++++.+++..+.+++.   .|.+++ ..... +.. .+....++.||
T Consensus        18 ~~~~~~~~vLDiG--cG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v-~~~~~-~~~-~l~~~~~~~fD   91 (185)
T 3mti_A           18 EVLDDESIVVDAT--MGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENT-ELILD-GHE-NLDHYVREPIR   91 (185)
T ss_dssp             TTCCTTCEEEESC--CTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCE-EEEES-CGG-GGGGTCCSCEE
T ss_pred             HhCCCCCEEEEEc--CCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcE-EEEeC-cHH-HHHhhccCCcC
Confidence            4578899999988  5668888888887 88999999999888777643   343322 11111 111 11122234699


Q ss_pred             EEEeCCCc----------------chHHHHHHccccCCEEEEEcc
Q 042426          153 IYFENVGG----------------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       153 ~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +|+-..+.                ..+..+.+.|+|+|+++.+..
T Consensus        92 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           92 AAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             EEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             EEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            99765321                135788899999999987654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.97  E-value=0.002  Score=53.20  Aligned_cols=76  Identities=17%  Similarity=0.285  Sum_probs=51.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CC-ceeecCCchhHHHHHHhHcCCCccEEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG----FD-DAFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g----~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      +.+|||+||+|.+|..+++.+...|.+|++++++..+.+.+.+.+.    .. ...|..+...+.+.+...   ++|+||
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~vi   85 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIVF   85 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc---CCCEEE
Confidence            4689999999999999999888889999999987654433321221    11 123444442333333332   489999


Q ss_pred             eCCC
Q 042426          156 ENVG  159 (270)
Q Consensus       156 d~~g  159 (270)
                      .+++
T Consensus        86 h~A~   89 (357)
T 1rkx_A           86 HMAA   89 (357)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            9998

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.97  E-value=0.0031  Score=51.96  Aligned_cols=94  Identities=23%  Similarity=0.208  Sum_probs=61.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHH--HhCCCc-eeecCCchhHHHHHHhHcCCCccEE
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK----EKVDLLKH--KFGFDD-AFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~----~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      .+|||+||+|.+|..+++.+...|.+|++++|++    ++.+.+.+  ..+... ..|..+..++.+.+.+.   ++|+|
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~---~~d~V   87 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH---EIDIV   87 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT---TCCEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC---CCCEE
Confidence            4799999999999999999988899999999866    45443331  234432 23555542444444421   59999


Q ss_pred             EeCCCcc---hHHHHHHccccCC---EEEE
Q 042426          155 FENVGGK---MLDAVLLNMRICG---HIAV  178 (270)
Q Consensus       155 ~d~~g~~---~~~~~~~~l~~~G---~~v~  178 (270)
                      |.+++..   .....++.++..|   +++.
T Consensus        88 i~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           88 VSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             EECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             EECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            9999853   3344555554444   5553

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.97  E-value=0.0074  Score=48.17  Aligned_cols=100  Identities=12%  Similarity=0.040  Sum_probs=68.9

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ....+.++.+||-+|  +|.|..+..+++..|.+|++++.+++..+.+++.+   |...-+..... ++.    +. ++.
T Consensus        58 ~~~~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~----~~-~~~  129 (287)
T 1kpg_A           58 GKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GWE----QF-DEP  129 (287)
T ss_dssp             TTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CGG----GC-CCC
T ss_pred             HHcCCCCcCEEEEEC--CcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC-Chh----hC-CCC
Confidence            445678899999998  56688888999777999999999999888887443   32211222111 221    11 146


Q ss_pred             ccEEEeC-----CCc----chHHHHHHccccCCEEEEEcc
Q 042426          151 IDIYFEN-----VGG----KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       151 ~d~v~d~-----~g~----~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ||+|+..     .+.    ..+..+.+.|+|+|+++....
T Consensus       130 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          130 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             CSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             eeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence            9999865     221    267888899999999987544

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.97  E-value=0.0039  Score=49.45  Aligned_cols=96  Identities=17%  Similarity=0.081  Sum_probs=66.8

Q ss_pred             cCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHH
Q 042426           61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLD  140 (270)
Q Consensus        61 l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  140 (270)
                      +||....+...+.+...--.|.+++|.|+++.+|..++.++...|++|++..+..                    . ++.
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t--------------------~-~L~  198 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT--------------------K-DLS  198 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-CHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc--------------------h-hHH
Confidence            4555445555554443334789999999977799999999999999988775321                    1 344


Q ss_pred             HHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccc
Q 042426          141 AALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       141 ~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +.+++     +|+++.++|.+.+ ---+.++++..++.+|...
T Consensus       199 ~~~~~-----ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          199 LYTRQ-----ADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             HHHTT-----CSEEEECSSCTTC-BCGGGSCTTEEEEECCCEE
T ss_pred             HHhhc-----CCEEEECCCCCCc-CCHHHcCCCeEEEEeccCc
Confidence            44443     8999999997633 2335678888888888743

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.96  E-value=0.0049  Score=49.27  Aligned_cols=96  Identities=15%  Similarity=0.019  Sum_probs=66.0

Q ss_pred             cCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHH
Q 042426           61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLD  140 (270)
Q Consensus        61 l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  140 (270)
                      +||....+...+.+..---.|.+++|.|+++-+|..+++++...|++|++..+...                     ++.
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~---------------------~l~  203 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS---------------------TED  203 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC---------------------HHH
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC---------------------Cch
Confidence            45554555555544443347899999998667999999999999999888764222                     222


Q ss_pred             --HHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccc
Q 042426          141 --AALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       141 --~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                        +.+++     +|+|+.++|.+.+ ---+.++++..++.+|...
T Consensus       204 l~~~~~~-----ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  242 (300)
T 4a26_A          204 MIDYLRT-----ADIVIAAMGQPGY-VKGEWIKEGAAVVDVGTTP  242 (300)
T ss_dssp             HHHHHHT-----CSEEEECSCCTTC-BCGGGSCTTCEEEECCCEE
T ss_pred             hhhhhcc-----CCEEEECCCCCCC-CcHHhcCCCcEEEEEeccC
Confidence              33333     8999999987532 1224578898999988743

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.95  E-value=0.0008  Score=52.33  Aligned_cols=73  Identities=16%  Similarity=0.105  Sum_probs=49.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhH-cCCCccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRC-FPEGIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~-~~~~~d~v~d~~g  159 (270)
                      +.+++|+||+|++|..+++.+...|++|++++++++    .. +.. ....|..+.+++.+.+.+. ..+++|++++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~----~~-~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag   75 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----GE-DLI-YVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   75 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC----SS-SSE-EEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc----cc-ceE-EEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence            468999999999999999988888999999998754    11 110 0123555542344333332 0126899999887

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.95  E-value=0.0035  Score=50.57  Aligned_cols=91  Identities=18%  Similarity=0.212  Sum_probs=58.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC------HHHHHHHHH--HhCCCc-eeecCCchhHHHHHHhHcCCCcc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS------KEKVDLLKH--KFGFDD-AFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~------~~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      .+|+|+||+|.+|..+++.+...|.+|++++|+      +++.+.+++  ..|... ..|..+..++.+.+.     ++|
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----~~d   79 (308)
T 1qyc_A            5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-----NVD   79 (308)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----TCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-----CCC
Confidence            579999999999999999988889999999986      334433331  234331 235554423433333     399


Q ss_pred             EEEeCCCcc---hHHHHHHccccC---CEEE
Q 042426          153 IYFENVGGK---MLDAVLLNMRIC---GHIA  177 (270)
Q Consensus       153 ~v~d~~g~~---~~~~~~~~l~~~---G~~v  177 (270)
                      +||.+++..   .....++.+...   .+++
T Consensus        80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           80 VVISTVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             EEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             EEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            999999853   233444444332   4676

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=96.95  E-value=0.0016  Score=53.59  Aligned_cols=104  Identities=18%  Similarity=0.206  Sum_probs=66.5

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhC--------------CCceeecCCch
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKFG--------------FDDAFNYKEEP  137 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~g--------------~~~vi~~~~~~  137 (270)
                      ....+.+|++||-.|.  |.|..++.+++..|  .+|+++..+++..+.+++.+.              ... +..... 
T Consensus        99 ~~l~~~~g~~VLDiG~--G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~-v~~~~~-  174 (336)
T 2b25_A           99 SMMDINPGDTVLEAGS--GSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN-VDFIHK-  174 (336)
T ss_dssp             HHHTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC-EEEEES-
T ss_pred             HhcCCCCCCEEEEeCC--CcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCc-eEEEEC-
Confidence            3456889999999984  44888888888766  699999999988877774321              111 111111 


Q ss_pred             hHHHHHHhHcCCCccEEEeCCCcc--hHHHHHHccccCCEEEEEcc
Q 042426          138 DLDAALNRCFPEGIDIYFENVGGK--MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       138 ~~~~~i~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +..+.......+.||+|+-....+  .+..+.+.|+|+|+++....
T Consensus       175 d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          175 DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             ChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            111111111123599998765543  68899999999999986543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.95  E-value=0.0049  Score=48.60  Aligned_cols=95  Identities=11%  Similarity=-0.003  Sum_probs=68.2

Q ss_pred             ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhH
Q 042426           60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDL  139 (270)
Q Consensus        60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  139 (270)
                      -+||.......++.+..  -.|.+++|.|+++-+|..+++++...|++|++..+.                    .. ++
T Consensus       131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~--------------------t~-~L  187 (276)
T 3ngx_A          131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK--------------------TK-DI  187 (276)
T ss_dssp             SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------------CS-CH
T ss_pred             CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC--------------------cc-cH
Confidence            44555555555665544  678999999996779999999999999998877532                    12 55


Q ss_pred             HHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccc
Q 042426          140 DAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       140 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      .+.+++     +|+++.++|.+.+ -.-+.++++..++.+|...
T Consensus       188 ~~~~~~-----ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          188 GSMTRS-----SKIVVVAVGRPGF-LNREMVTPGSVVIDVGINY  225 (276)
T ss_dssp             HHHHHH-----SSEEEECSSCTTC-BCGGGCCTTCEEEECCCEE
T ss_pred             HHhhcc-----CCEEEECCCCCcc-ccHhhccCCcEEEEeccCc
Confidence            555655     8999999997532 1224578888998888743

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.94  E-value=0.0064  Score=48.36  Aligned_cols=101  Identities=7%  Similarity=0.062  Sum_probs=69.6

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh----CCCceeecCCchhHHHHHHhHc
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKF----GFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      ....++++++||-.|  +|.|..+..+++..  +.+|++++.+++..+.+++.+    |.+.+ ..... ++.+   ...
T Consensus       104 ~~~~~~~~~~VLD~G--~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~---~~~  176 (275)
T 1yb2_A          104 MRCGLRPGMDILEVG--VGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRS-DIAD---FIS  176 (275)
T ss_dssp             --CCCCTTCEEEEEC--CTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECS-CTTT---CCC
T ss_pred             HHcCCCCcCEEEEec--CCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcE-EEEEC-chhc---cCc
Confidence            445688999999998  45788888888874  579999999999888877443    54322 22221 2221   111


Q ss_pred             CCCccEEEeCCCc--chHHHHHHccccCCEEEEEcc
Q 042426          148 PEGIDIYFENVGG--KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       148 ~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .+.||+|+-....  ..+..+.+.|+|+|+++....
T Consensus       177 ~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~  212 (275)
T 1yb2_A          177 DQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  212 (275)
T ss_dssp             SCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             CCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            2369999976654  378899999999999987643

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.94  E-value=0.011  Score=47.03  Aligned_cols=91  Identities=13%  Similarity=0.050  Sum_probs=62.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC--CceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF--DDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      .+.+++|+|+ |++|.+++..+...|+ +|++..|+.++.+.+.++++.  ..++.+.   ++.    .   ..+|+|++
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~---~l~----~---~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE---ALE----G---QSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG---GGT----T---CCCSEEEE
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH---Hhc----c---cCCCEEEE
Confidence            5789999997 9999999998888997 999999999988877657664  1122221   211    1   35999999


Q ss_pred             CCCcchHH----HHHHccccCCEEEEEcc
Q 042426          157 NVGGKMLD----AVLLNMRICGHIAVCGM  181 (270)
Q Consensus       157 ~~g~~~~~----~~~~~l~~~G~~v~~g~  181 (270)
                      |++.....    .....++++..++.+..
T Consensus       188 aTp~gm~~~~~~i~~~~l~~~~~V~DlvY  216 (272)
T 3pwz_A          188 ATSASLTADLPPLPADVLGEAALAYELAY  216 (272)
T ss_dssp             CSSGGGGTCCCCCCGGGGTTCSEEEESSC
T ss_pred             CCCCCCCCCCCCCCHHHhCcCCEEEEeec
Confidence            98743211    01245666666666533

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=96.93  E-value=0.0046  Score=47.41  Aligned_cols=100  Identities=10%  Similarity=0.069  Sum_probs=65.4

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcC--
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFP--  148 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~--  148 (270)
                      ....++.+||-+|  ++.|..++.+++.+  +.+|+++..+++..+.+++   ..|...-+..... +..+.+.....  
T Consensus        54 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~l~~~~~~~  130 (221)
T 3u81_A           54 IREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKKKY  130 (221)
T ss_dssp             HHHHCCSEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGTTTTS
T ss_pred             HHhcCCCEEEEEC--CCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEEC-CHHHHHHHHHHhc
Confidence            3445678999998  67788888888865  6799999999988887774   3455322333333 44444443321  


Q ss_pred             --CCccEEEeCCCcch-------HHHHHHccccCCEEEEE
Q 042426          149 --EGIDIYFENVGGKM-------LDAVLLNMRICGHIAVC  179 (270)
Q Consensus       149 --~~~d~v~d~~g~~~-------~~~~~~~l~~~G~~v~~  179 (270)
                        +.||+||-......       +... +.|+|+|.++.-
T Consensus       131 ~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~  169 (221)
T 3u81_A          131 DVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLAD  169 (221)
T ss_dssp             CCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEES
T ss_pred             CCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEe
Confidence              36999976543321       2222 789999998764

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.93  E-value=0.0023  Score=52.35  Aligned_cols=80  Identities=10%  Similarity=0.119  Sum_probs=50.3

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHh----CCC-ceeecCCchhHHHHHHhHcCC
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK--VDLLKHKF----GFD-DAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~--~~~~~~~~----g~~-~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      .-+++.+|||+||+|.+|..+++.+...|.+|++++++..+  .+.+. .+    +.. ...|..+..++.+.+...   
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   85 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA---   85 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchh-hccccCceEEEECCCCCHHHHHHHHHHc---
Confidence            34577899999999999999999888889999999987543  12222 22    111 112444432333334332   


Q ss_pred             CccEEEeCCCc
Q 042426          150 GIDIYFENVGG  160 (270)
Q Consensus       150 ~~d~v~d~~g~  160 (270)
                      ++|+||.+++.
T Consensus        86 ~~d~Vih~A~~   96 (335)
T 1rpn_A           86 QPQEVYNLAAQ   96 (335)
T ss_dssp             CCSEEEECCSC
T ss_pred             CCCEEEECccc
Confidence            47999999873

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.92  E-value=0.0081  Score=50.69  Aligned_cols=93  Identities=16%  Similarity=0.093  Sum_probs=64.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhCC------C-ceeecCCchhHHHHHHhHcCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVG---CYVVGSARSKEKVDLLKHKFGF------D-DAFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g---~~v~~~~~~~~~~~~~~~~~g~------~-~vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      +|+|+|+ |++|..+++.+...|   .+|++.+++.++.+.+.++++.      . ..+|..+.+++.+.+.+.   ++|
T Consensus         3 kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~---~~D   78 (405)
T 4ina_A            3 KVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV---KPQ   78 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH---CCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh---CCC
Confidence            6899998 999999999888777   4999999999988777655532      1 123444432444444443   489


Q ss_pred             EEEeCCCcc-hHHHHHHccccCCEEEEE
Q 042426          153 IYFENVGGK-MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       153 ~v~d~~g~~-~~~~~~~~l~~~G~~v~~  179 (270)
                      +|++|++.. ....+..++..+-.++.+
T Consensus        79 vVin~ag~~~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           79 IVLNIALPYQDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             EEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred             EEEECCCcccChHHHHHHHHhCCCEEEe
Confidence            999999863 334445566677677754

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=96.91  E-value=0.007  Score=49.10  Aligned_cols=94  Identities=11%  Similarity=0.088  Sum_probs=65.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +||++|  +|.|..+..+++.+ +.+|+++..+++-.+.+++.++..  .-+..... |..+.+.+...+.||+|+-...
T Consensus        92 rVLdIG--~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~-Da~~~l~~~~~~~fDvIi~D~~  168 (317)
T 3gjy_A           92 RITHLG--GGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVD-DARMVAESFTPASRDVIIRDVF  168 (317)
T ss_dssp             EEEEES--CGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEES-CHHHHHHTCCTTCEEEEEECCS
T ss_pred             EEEEEE--CCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEEC-cHHHHHhhccCCCCCEEEECCC
Confidence            899998  67788888888855 679999999999999998666541  11222222 4444454433347998875321


Q ss_pred             -----------cchHHHHHHccccCCEEEEE
Q 042426          160 -----------GKMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       160 -----------~~~~~~~~~~l~~~G~~v~~  179 (270)
                                 ...++.+.+.|+++|.++.-
T Consensus       169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~  199 (317)
T 3gjy_A          169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVAN  199 (317)
T ss_dssp             TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEE
T ss_pred             CccccchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence                       12578889999999998854

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=96.91  E-value=0.0036  Score=49.47  Aligned_cols=97  Identities=13%  Similarity=0.192  Sum_probs=66.0

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCCc
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLV---GCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~---g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      +++|.+||-+|  +|.|..+..+++..   |++|++++.+++-++.+++.+   +...-+..... ++    .+...+.+
T Consensus        68 ~~~~~~vLDlG--cGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~-D~----~~~~~~~~  140 (261)
T 4gek_A           68 VQPGTQVYDLG--CSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-DI----RDIAIENA  140 (261)
T ss_dssp             CCTTCEEEEET--CTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CT----TTCCCCSE
T ss_pred             CCCCCEEEEEe--CCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec-cc----cccccccc
Confidence            78999999998  67788888888864   679999999999888887443   33222222111 21    11222358


Q ss_pred             cEEEeCCCc---------chHHHHHHccccCCEEEEEcc
Q 042426          152 DIYFENVGG---------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       152 d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      |+|+-...-         ..+....+.|+|||+++....
T Consensus       141 d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~  179 (261)
T 4gek_A          141 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  179 (261)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence            888764331         147888999999999987644

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=96.91  E-value=0.0081  Score=46.60  Aligned_cols=95  Identities=14%  Similarity=0.052  Sum_probs=65.5

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEE
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      ..++++.+||-+|  +|.|..+..+++. |++|++++.+++..+.++ +.     +..... +..+.+.....+.||+|+
T Consensus        37 ~~~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~-~~-----~~~~~~-d~~~~~~~~~~~~fD~i~  106 (240)
T 3dli_A           37 PYFKGCRRVLDIG--CGRGEFLELCKEE-GIESIGVDINEDMIKFCE-GK-----FNVVKS-DAIEYLKSLPDKYLDGVM  106 (240)
T ss_dssp             GGTTTCSCEEEET--CTTTHHHHHHHHH-TCCEEEECSCHHHHHHHH-TT-----SEEECS-CHHHHHHTSCTTCBSEEE
T ss_pred             hhhcCCCeEEEEe--CCCCHHHHHHHhC-CCcEEEEECCHHHHHHHH-hh-----cceeec-cHHHHhhhcCCCCeeEEE
Confidence            3467789999998  5667777777765 889999999999998888 33     122222 343333233334799998


Q ss_pred             eCCC-----c----chHHHHHHccccCCEEEEEc
Q 042426          156 ENVG-----G----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       156 d~~g-----~----~~~~~~~~~l~~~G~~v~~g  180 (270)
                      ....     .    ..+..+.+.|+|+|+++...
T Consensus       107 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  140 (240)
T 3dli_A          107 ISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES  140 (240)
T ss_dssp             EESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred             ECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            6432     1    25778889999999988653

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.90  E-value=0.0031  Score=52.18  Aligned_cols=97  Identities=16%  Similarity=0.159  Sum_probs=60.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHh-CCCc-eee-cCCchhHHHHHHhHcCCCccEEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV--DLLKHKF-GFDD-AFN-YKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~--~~~~~~~-g~~~-vi~-~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      +.+|+|+||+|.+|..+++.+...|.+|+++++++++.  +.+. .. +... ..| ..+..++.+.+.     ++|.||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~-~~~~v~~v~~D~l~d~~~l~~~~~-----~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-AIPNVTLFQGPLLNNVPLMDTLFE-----GAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH-TSTTEEEEESCCTTCHHHHHHHHT-----TCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh-hcCCcEEEECCccCCHHHHHHHHh-----cCCEEE
Confidence            45799999999999999988888899999999876654  3333 21 2221 134 444322333332     489999


Q ss_pred             eCCCcc------hHHHHHHcccc-C--CEEEEEcccc
Q 042426          156 ENVGGK------MLDAVLLNMRI-C--GHIAVCGMIS  183 (270)
Q Consensus       156 d~~g~~------~~~~~~~~l~~-~--G~~v~~g~~~  183 (270)
                      .+.+..      .....++.++. +  ++++.++...
T Consensus        79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred             EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence            776532      12334444433 3  5898887643

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.90  E-value=0.0075  Score=48.15  Aligned_cols=88  Identities=13%  Similarity=0.047  Sum_probs=59.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcCCCccEEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      .+.+++|+|+ |++|.+++..+...|+ +|++..|+.++.+.+.++++..   .+.+..+   .       . .++|+|+
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~---l-------~-~~aDiII  192 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ---L-------K-QSYDVII  192 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG---C-------C-SCEEEEE
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH---h-------c-CCCCEEE
Confidence            5789999997 9999999998888997 9999999998877776566531   2222221   1       1 3599999


Q ss_pred             eCCCcchHHH----HHHccccCCEEEEE
Q 042426          156 ENVGGKMLDA----VLLNMRICGHIAVC  179 (270)
Q Consensus       156 d~~g~~~~~~----~~~~l~~~G~~v~~  179 (270)
                      +|++......    -...++++..++.+
T Consensus       193 naTp~gm~~~~~~l~~~~l~~~~~V~Dl  220 (281)
T 3o8q_A          193 NSTSASLDGELPAIDPVIFSSRSVCYDM  220 (281)
T ss_dssp             ECSCCCC----CSCCGGGEEEEEEEEES
T ss_pred             EcCcCCCCCCCCCCCHHHhCcCCEEEEe
Confidence            9997542211    12345555555554

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.89  E-value=0.0014  Score=54.47  Aligned_cols=75  Identities=11%  Similarity=0.091  Sum_probs=51.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC-ceeecC-CchhHHHHHHhHcCCCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFD-DAFNYK-EEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~-~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      +.+|||+||+|.+|..+++.+... |.+|++++++.++.+.+.+..+.. ...|.. +...+.+.+.     ++|+||.+
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vih~   98 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-----KCDVILPL   98 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-----HCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-----cCCEEEEc
Confidence            368999999999999999988777 899999999876655443112222 123444 4323333333     39999998


Q ss_pred             CCc
Q 042426          158 VGG  160 (270)
Q Consensus       158 ~g~  160 (270)
                      ++.
T Consensus        99 A~~  101 (372)
T 3slg_A           99 VAI  101 (372)
T ss_dssp             BCC
T ss_pred             Ccc
Confidence            873

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.89  E-value=0.0024  Score=49.14  Aligned_cols=100  Identities=14%  Similarity=0.093  Sum_probs=66.8

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcC------CEEEEEeCCHHHHHHHHHH---hC-----CCce-eecCCchh-HH
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVG------CYVVGSARSKEKVDLLKHK---FG-----FDDA-FNYKEEPD-LD  140 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g------~~v~~~~~~~~~~~~~~~~---~g-----~~~v-i~~~~~~~-~~  140 (270)
                      .++++++||-+|+  |.|..+..+++..+      .+|+++..+++..+.+++.   .+     ...+ +...+..+ +.
T Consensus        77 ~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGS--GSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE  154 (227)
T ss_dssp             TSCTTCEEEEESC--TTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred             hCCCCCEEEEECC--CCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence            5788999999984  44888999998876      5999999999888777633   23     2221 11111101 11


Q ss_pred             HHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEc
Q 042426          141 AALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       141 ~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +....  .+.||+|+..... ..+..+.+.|+++|+++..-
T Consensus       155 ~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~  193 (227)
T 2pbf_A          155 EEKKE--LGLFDAIHVGASASELPEILVDLLAENGKLIIPI  193 (227)
T ss_dssp             HHHHH--HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred             ccCcc--CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence            00011  1359999887665 46688899999999988753

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.88  E-value=0.0093  Score=49.12  Aligned_cols=48  Identities=23%  Similarity=0.304  Sum_probs=39.6

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD  128 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~  128 (270)
                      -+|.++.|.|. |.+|+.+++.++.+|++|++++.++++.+..+ ++++.
T Consensus       173 L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~-~~ga~  220 (355)
T 1c1d_A          173 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHT  220 (355)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccHHHHHH-hcCCE
Confidence            46899999996 99999999999999999998887766644444 67753

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.88  E-value=0.0028  Score=51.90  Aligned_cols=89  Identities=10%  Similarity=0.004  Sum_probs=66.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|..+++.++.+|++|++..++..+.+... ++|..    +.   ++.+.+.+     .|+|+-++.
T Consensus       144 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~----~~---~l~ell~~-----aDvV~l~~P  209 (330)
T 4e5n_A          144 DNATVGFLGM-GAIGLAMADRLQGWGATLQYHEAKALDTQTEQ-RLGLR----QV---ACSELFAS-----SDFILLALP  209 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHTTTSCCEEEEECSSCCCHHHHH-HHTEE----EC---CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCCCcHhHHH-hcCce----eC---CHHHHHhh-----CCEEEEcCC
Confidence            4779999997 99999999999999999999998764555554 56652    11   34444444     789988876


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEccc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      . +     .....+..|+++..++.++..
T Consensus       210 ~t~~t~~li~~~~l~~mk~gailIN~arg  238 (330)
T 4e5n_A          210 LNADTLHLVNAELLALVRPGALLVNPCRG  238 (330)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             CCHHHHHHhCHHHHhhCCCCcEEEECCCC
Confidence            3 1     235778888999999988763

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.88  E-value=0.01  Score=50.11  Aligned_cols=93  Identities=17%  Similarity=0.273  Sum_probs=68.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-ecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAF-NYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +.+|+|.|. |.+|+.+++.++..|.+|+++..++++.+.++ +.|...++ |..+. +   .+.+..-..+|.++-+++
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-~~g~~vi~GDat~~-~---~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-KFGMKVFYGDATRM-D---LLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-HTTCCCEESCTTCH-H---HHHHTTTTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-hCCCeEEEcCCCCH-H---HHHhcCCCccCEEEECCC
Confidence            457999997 99999999999999999999999999999998 78875332 33333 2   344333337999999998


Q ss_pred             cc----hHHHHHHccccCCEEEEE
Q 042426          160 GK----MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       160 ~~----~~~~~~~~l~~~G~~v~~  179 (270)
                      ..    .+....+.+.|..+++.-
T Consensus        78 ~~~~n~~i~~~ar~~~p~~~Iiar  101 (413)
T 3l9w_A           78 DPQTNLQLTEMVKEHFPHLQIIAR  101 (413)
T ss_dssp             SHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             ChHHHHHHHHHHHHhCCCCeEEEE
Confidence            74    234445556677666654

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.88  E-value=0.0042  Score=51.26  Aligned_cols=90  Identities=22%  Similarity=0.244  Sum_probs=68.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|..+++.++.+|++|++..++....+.+. +.|...+    +  ++.+.+.+     .|+|+-++.
T Consensus       163 ~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~----~--~l~ell~~-----aDvV~l~~P  229 (351)
T 3jtm_A          163 EGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEK-ETGAKFV----E--DLNEMLPK-----CDVIVINMP  229 (351)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHH-HHCCEEC----S--CHHHHGGG-----CSEEEECSC
T ss_pred             cCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHH-hCCCeEc----C--CHHHHHhc-----CCEEEECCC
Confidence            4789999997 99999999999999999999998765556665 6676322    1  45444444     899998876


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEccc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      . +     .-...+..|+++..++.++..
T Consensus       230 lt~~t~~li~~~~l~~mk~gailIN~aRG  258 (351)
T 3jtm_A          230 LTEKTRGMFNKELIGKLKKGVLIVNNARG  258 (351)
T ss_dssp             CCTTTTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred             CCHHHHHhhcHHHHhcCCCCCEEEECcCc
Confidence            3 1     236778889999999988753

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.88  E-value=0.0034  Score=51.00  Aligned_cols=91  Identities=13%  Similarity=0.134  Sum_probs=58.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHH--HhCCCc-eeecCCchhHHHHHHhHcCCCcc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK------EKVDLLKH--KFGFDD-AFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~------~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      .+|+|+||+|.+|..+++.+...|.+|++++|+.      ++.+.+.+  ..+... ..|..+.+++.+.+.     ++|
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~-----~~d   79 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK-----QVD   79 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-----TCS
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc-----CCC
Confidence            4699999999999999998888899999999875      33333320  234432 235554423333332     499


Q ss_pred             EEEeCCCcc---hHHHHHHccccC---CEEE
Q 042426          153 IYFENVGGK---MLDAVLLNMRIC---GHIA  177 (270)
Q Consensus       153 ~v~d~~g~~---~~~~~~~~l~~~---G~~v  177 (270)
                      +||.+++..   .....++.+...   ++++
T Consensus        80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           80 IVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             EEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             EEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            999999852   334445544433   4676

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.86  E-value=0.0057  Score=48.57  Aligned_cols=98  Identities=16%  Similarity=0.091  Sum_probs=67.8

Q ss_pred             cccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchh
Q 042426           59 GILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPD  138 (270)
Q Consensus        59 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  138 (270)
                      +.+||........+.+...--.|.+++|.|++..+|.-+++++...|++|++..+..                    . +
T Consensus       137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------~-~  195 (288)
T 1b0a_A          137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------------K-N  195 (288)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------------S-C
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------------h-h
Confidence            344554444444554433334688999999966789999999999999988875221                    2 5


Q ss_pred             HHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccc
Q 042426          139 LDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       139 ~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +.+.+++     +|+|+.++|.+.+ -.-+.++++..++.+|...
T Consensus       196 L~~~~~~-----ADIVI~Avg~p~l-I~~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          196 LRHHVEN-----ADLLIVAVGKPGF-IPGDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             HHHHHHH-----CSEEEECSCCTTC-BCTTTSCTTCEEEECCCEE
T ss_pred             HHHHhcc-----CCEEEECCCCcCc-CCHHHcCCCcEEEEccCCc
Confidence            5555655     8999999997633 2223478899999988743

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.86  E-value=0.0083  Score=49.23  Aligned_cols=87  Identities=15%  Similarity=0.229  Sum_probs=65.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|...++.++..|.+|++..++.++ +... ++|..    ..   ++.+.+.+     .|+|+.++.
T Consensus       149 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~----~~---~l~~~l~~-----aDvVil~vp  213 (334)
T 2dbq_A          149 YGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-ELNAE----FK---PLEDLLRE-----SDFVVLAVP  213 (334)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HHCCE----EC---CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-hcCcc----cC---CHHHHHhh-----CCEEEECCC
Confidence            4679999997 999999999999999999999988766 5555 66652    11   34444444     799999886


Q ss_pred             cc-----hH-HHHHHccccCCEEEEEcc
Q 042426          160 GK-----ML-DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~~-----~~-~~~~~~l~~~G~~v~~g~  181 (270)
                      ..     .+ ...+..++++..++.++.
T Consensus       214 ~~~~t~~~i~~~~~~~mk~~ailIn~sr  241 (334)
T 2dbq_A          214 LTRETYHLINEERLKLMKKTAILINIAR  241 (334)
T ss_dssp             CCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             CChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            42     22 456778888888888764

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.86  E-value=0.0063  Score=48.64  Aligned_cols=96  Identities=17%  Similarity=0.151  Sum_probs=65.7

Q ss_pred             ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhH
Q 042426           60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDL  139 (270)
Q Consensus        60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  139 (270)
                      -+||.......++.+..---.|.+++|.|++..+|.-+++++...|++|++..+.                    .. ++
T Consensus       144 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------------t~-~L  202 (301)
T 1a4i_A          144 FIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK--------------------TA-HL  202 (301)
T ss_dssp             CCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------------CS-SH
T ss_pred             ccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC--------------------cc-cH
Confidence            3444444444444333322468899999996679999999999999998877422                    12 45


Q ss_pred             HHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEccc
Q 042426          140 DAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       140 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      .+.+++     +|+||.++|.+.+ -.-+.++++..++.+|..
T Consensus       203 ~~~~~~-----ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~  239 (301)
T 1a4i_A          203 DEEVNK-----GDILVVATGQPEM-VKGEWIKPGAIVIDCGIN  239 (301)
T ss_dssp             HHHHTT-----CSEEEECCCCTTC-BCGGGSCTTCEEEECCCB
T ss_pred             HHHhcc-----CCEEEECCCCccc-CCHHHcCCCcEEEEccCC
Confidence            555544     8999999998633 233457899999999874

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.84  E-value=0.0067  Score=49.81  Aligned_cols=77  Identities=14%  Similarity=0.146  Sum_probs=50.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHHHhCC--C-ceeecCCchhHHHHHHhHc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK----------EKVDLLKHKFGF--D-DAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~----------~~~~~~~~~~g~--~-~vi~~~~~~~~~~~i~~~~  147 (270)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.          +..+.+.+..+.  . ...|..+..++.+.+.+. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            35899999999999999998888899999998632          334444311232  1 123444442333333321 


Q ss_pred             CCCccEEEeCCCc
Q 042426          148 PEGIDIYFENVGG  160 (270)
Q Consensus       148 ~~~~d~v~d~~g~  160 (270)
                        ++|+||.+++.
T Consensus        81 --~~d~vih~A~~   91 (348)
T 1ek6_A           81 --SFMAVIHFAGL   91 (348)
T ss_dssp             --CEEEEEECCSC
T ss_pred             --CCCEEEECCCC
Confidence              59999999873

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.84  E-value=0.0071  Score=45.94  Aligned_cols=98  Identities=16%  Similarity=0.109  Sum_probs=67.8

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEE
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      ...+.++.+||-.|  +|.|..+..+++. |.++++++.++...+.++ +.+...+ ..... ++.+.   ...+.||+|
T Consensus        41 l~~~~~~~~vLdiG--~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~-~~~~~~~-~~~~~-d~~~~---~~~~~~D~v  111 (218)
T 3ou2_A           41 LRAGNIRGDVLELA--SGTGYWTRHLSGL-ADRVTALDGSAEMIAEAG-RHGLDNV-EFRQQ-DLFDW---TPDRQWDAV  111 (218)
T ss_dssp             HTTTTSCSEEEEES--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHG-GGCCTTE-EEEEC-CTTSC---CCSSCEEEE
T ss_pred             HhcCCCCCeEEEEC--CCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHH-hcCCCCe-EEEec-ccccC---CCCCceeEE
Confidence            34577888999998  4568888888877 889999999999999998 5664322 11111 22111   122379999


Q ss_pred             EeCCCc---------chHHHHHHccccCCEEEEEcc
Q 042426          155 FENVGG---------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       155 ~d~~g~---------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +....-         ..+..+.+.|+|+|+++....
T Consensus       112 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          112 FFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence            875431         246788889999999988754

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.83  E-value=0.0027  Score=49.91  Aligned_cols=98  Identities=15%  Similarity=0.065  Sum_probs=64.1

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-------------------ceeecCCchh
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-------------------DAFNYKEEPD  138 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-------------------~vi~~~~~~~  138 (270)
                      ..++.+||..|  +|.|..+..+++. |++|++++.|+.-.+.++++.+..                   .-+.+... +
T Consensus        66 ~~~~~~vLD~G--CG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-D  141 (252)
T 2gb4_A           66 GQSGLRVFFPL--CGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC-S  141 (252)
T ss_dssp             TCCSCEEEETT--CTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES-C
T ss_pred             CCCCCeEEEeC--CCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC-c
Confidence            45788999998  6778888888875 999999999999988887555320                   01111111 2


Q ss_pred             HHHHHHhHcCCCccEEEeCCCc---------chHHHHHHccccCCEEEEEc
Q 042426          139 LDAALNRCFPEGIDIYFENVGG---------KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       139 ~~~~i~~~~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +.+ +.....+.||+|++...-         ..+..+.+.|+|+|+++.+.
T Consensus       142 ~~~-l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~  191 (252)
T 2gb4_A          142 IFD-LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV  191 (252)
T ss_dssp             TTT-GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccc-CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence            111 111111469999985321         14677889999999986543

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.83  E-value=0.0033  Score=50.27  Aligned_cols=95  Identities=15%  Similarity=0.136  Sum_probs=64.3

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh----CC--------CceeecCCchhHHHHHHh
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKF----GF--------DDAFNYKEEPDLDAALNR  145 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~----g~--------~~vi~~~~~~~~~~~i~~  145 (270)
                      .++.+||++|  +|.|..+..+++. +. +|+++..+++-.+.+++.+    +.        +.-+..... +..+.+..
T Consensus        74 ~~~~~VLdiG--~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~-D~~~~l~~  149 (281)
T 1mjf_A           74 PKPKRVLVIG--GGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG-DGFEFIKN  149 (281)
T ss_dssp             SCCCEEEEEE--CTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES-CHHHHHHH
T ss_pred             CCCCeEEEEc--CCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEEC-chHHHhcc
Confidence            4568999999  5567777788877 65 9999999999999888555    21        111222222 44444443


Q ss_pred             HcCCCccEEEeCCC-----------cchHHHHHHccccCCEEEEE
Q 042426          146 CFPEGIDIYFENVG-----------GKMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       146 ~~~~~~d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~  179 (270)
                        .+.||+|+-...           ...++.+.+.|+|+|.++.-
T Consensus       150 --~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          150 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             --cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence              447999875332           12578889999999999864

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.82  E-value=0.0055  Score=49.55  Aligned_cols=91  Identities=15%  Similarity=0.142  Sum_probs=58.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      .+|||+||+|.+|..+++.+...|.+|+++++++.+.+ +.   +... ..|.    . .+.+.+... ++|+||.+++.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~~~~Dl----~-~~~~~~~~~-~~d~Vih~a~~   72 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYEYRVSDY----T-LEDLINQLN-DVDAVVHLAAT   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCC----C-HHHHHHHTT-TCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceEEEEccc----c-HHHHHHhhc-CCCEEEEcccc
Confidence            58999999999999999999999999999999854444 33   3321 1233    3 344444433 59999999874


Q ss_pred             c--------------hHHHHHHccccC--CEEEEEccc
Q 042426          161 K--------------MLDAVLLNMRIC--GHIAVCGMI  182 (270)
Q Consensus       161 ~--------------~~~~~~~~l~~~--G~~v~~g~~  182 (270)
                      .              .....++.+...  .+++.++..
T Consensus        73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~  110 (311)
T 3m2p_A           73 RGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTI  110 (311)
T ss_dssp             CCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            1              123344444443  478877653

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.81  E-value=0.0051  Score=48.70  Aligned_cols=86  Identities=15%  Similarity=0.157  Sum_probs=62.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +.+++|+|+ |++|.+++..+...|.+|++..|+.++.+.+. +++.. ...+.+. .           .+|+|++|+..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~-~~~~~~l-~-----------~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCD-CFMEPPK-S-----------AFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCE-EESSCCS-S-----------CCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-EecHHHh-c-----------cCCEEEEcccC
Confidence            789999997 99999999999999999999999999988887 78743 3333221 1           49999999864


Q ss_pred             c-----hH--HHHHHccccCCEEEEEcc
Q 042426          161 K-----ML--DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       161 ~-----~~--~~~~~~l~~~G~~v~~g~  181 (270)
                      .     .+  ......++++..++.+..
T Consensus       183 Gm~~~~~l~~~~l~~~l~~~~~v~D~vY  210 (269)
T 3phh_A          183 SLHNELPLNKEVLKGYFKEGKLAYDLAY  210 (269)
T ss_dssp             CCCCSCSSCHHHHHHHHHHCSEEEESCC
T ss_pred             CCCCCCCCChHHHHhhCCCCCEEEEeCC
Confidence            2     12  122225677777776543

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.81  E-value=0.01  Score=48.94  Aligned_cols=88  Identities=23%  Similarity=0.246  Sum_probs=65.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|..+++.++.+|.+|++..++. +.+... +.|...+    +  ++.+.+.+     .|+|+-++.
T Consensus       159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~-~~g~~~~----~--~l~ell~~-----aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGREN-SKERAR-ADGFAVA----E--SKDALFEQ-----SDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHH-HHHHHH-HTTCEEC----S--SHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCC-CHHHHH-hcCceEe----C--CHHHHHhh-----CCEEEEecc
Confidence            3679999997 9999999999999999999999775 334444 5665321    1  45555554     899998875


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEcc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      . +     .....+..|+++..++.++.
T Consensus       225 lt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             CcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            3 1     23577888999999999884

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.80  E-value=0.0041  Score=50.62  Aligned_cols=101  Identities=19%  Similarity=0.219  Sum_probs=68.0

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~  148 (270)
                      ....++++++||-+|.  |.|..+..+++..+  .+|++++.+++..+.+++.   .|... +..... ++.+...  ..
T Consensus        69 ~~l~~~~~~~VLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~-d~~~~~~--~~  142 (317)
T 1dl5_A           69 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCG-DGYYGVP--EF  142 (317)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEES-CGGGCCG--GG
T ss_pred             HhcCCCCcCEEEEecC--CchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEEC-Chhhccc--cC
Confidence            4567889999999984  44888888888653  4799999999988887743   24433 222211 2211111  11


Q ss_pred             CCccEEEeCCCcc-hHHHHHHccccCCEEEEEc
Q 042426          149 EGIDIYFENVGGK-MLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       149 ~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g  180 (270)
                      +.||+|+....-. ....+.+.|+|+|+++..-
T Consensus       143 ~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          143 SPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             CCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             CCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            3699999876543 4467888999999988653

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.78  E-value=0.015  Score=46.82  Aligned_cols=86  Identities=14%  Similarity=0.088  Sum_probs=61.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc-c
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-K  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-~  161 (270)
                      +|.|+|+ |.+|...+..+...|.+|++.++++++.+.+. +.|...   ..   ++.+.+.+     +|+||.|+.. .
T Consensus         7 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~---~~~~~~~~-----~D~vi~~v~~~~   73 (299)
T 1vpd_A            7 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET---AS---TAKAIAEQ-----CDVIITMLPNSP   73 (299)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE---CS---SHHHHHHH-----CSEEEECCSSHH
T ss_pred             eEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HCCCee---cC---CHHHHHhC-----CCEEEEECCCHH
Confidence            6999996 99999999888888999999999998888887 556421   11   34444433     8999999984 3


Q ss_pred             hHHHHH-------HccccCCEEEEEcc
Q 042426          162 MLDAVL-------LNMRICGHIAVCGM  181 (270)
Q Consensus       162 ~~~~~~-------~~l~~~G~~v~~g~  181 (270)
                      .+...+       ..++++..++.++.
T Consensus        74 ~~~~~~~~~~~l~~~l~~~~~vv~~s~  100 (299)
T 1vpd_A           74 HVKEVALGENGIIEGAKPGTVLIDMSS  100 (299)
T ss_dssp             HHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHhCcchHhhcCCCCCEEEECCC
Confidence            444444       45667777776643

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.77  E-value=0.0074  Score=49.45  Aligned_cols=88  Identities=10%  Similarity=0.055  Sum_probs=63.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|...++.++..|.+|++..++.++.+.+. +.|....       ++.+.+.+     .|+|+.++.
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~-------~l~e~l~~-----aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-EFQAEFV-------STPELAAQ-----SDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-TTTCEEC-------CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-hcCceeC-------CHHHHHhh-----CCEEEEeCC
Confidence            3678999997 99999999999999999999998766555555 5554311       23333433     899999886


Q ss_pred             cc-----hH-HHHHHccccCCEEEEEcc
Q 042426          160 GK-----ML-DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~~-----~~-~~~~~~l~~~G~~v~~g~  181 (270)
                      ..     .+ ...+..++++..++.++.
T Consensus       220 ~~~~t~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          220 LTPATEGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             CCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred             CChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            42     22 456778888888887765

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.77  E-value=0.015  Score=45.70  Aligned_cols=85  Identities=11%  Similarity=0.127  Sum_probs=63.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcch
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKM  162 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~  162 (270)
                      +|.|+|+ |.+|...+..+...|.+|.+.++++++.+.+.+++|...   +.   ++.+.+.     .+|+|+-|+....
T Consensus         5 ~i~iiG~-G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~---~~~~~~~-----~~D~Vi~~v~~~~   72 (259)
T 2ahr_A            5 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY---AM---SHQDLID-----QVDLVILGIKPQL   72 (259)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB---CS---SHHHHHH-----TCSEEEECSCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe---eC---CHHHHHh-----cCCEEEEEeCcHh
Confidence            6999996 999999888887778899999999988887775667541   11   3444443     2899999998766


Q ss_pred             HHHHHHccccCCEEEEE
Q 042426          163 LDAVLLNMRICGHIAVC  179 (270)
Q Consensus       163 ~~~~~~~l~~~G~~v~~  179 (270)
                      ....+..++++..++..
T Consensus        73 ~~~v~~~l~~~~~vv~~   89 (259)
T 2ahr_A           73 FETVLKPLHFKQPIISM   89 (259)
T ss_dssp             HHHHHTTSCCCSCEEEC
T ss_pred             HHHHHHHhccCCEEEEe
Confidence            67777777766656555

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.77  E-value=0.1  Score=42.51  Aligned_cols=88  Identities=14%  Similarity=0.191  Sum_probs=56.5

Q ss_pred             EEEEecCCchHHHHH-HHHHHHcCCEEEEE-eCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQLV-GQFVKLVGCYVVGS-ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~a-i~la~~~g~~v~~~-~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +|.|+|+ |.+|... +..+...+.+++++ ++++++.+.+.+++|...++  .   ++.+.+.+   ..+|+|+.|+..
T Consensus         2 ~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~---~~~~~l~~---~~~D~V~i~tp~   72 (332)
T 2glx_A            2 RWGLIGA-STIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--T---SVEELVGD---PDVDAVYVSTTN   72 (332)
T ss_dssp             EEEEESC-CHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--S---CHHHHHTC---TTCCEEEECSCG
T ss_pred             eEEEEcc-cHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--C---CHHHHhcC---CCCCEEEEeCCh
Confidence            5889997 9999876 54333377887754 56677776665577764332  1   44444432   259999999987


Q ss_pred             c-hHHHHHHccccCCEEEEEc
Q 042426          161 K-MLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       161 ~-~~~~~~~~l~~~G~~v~~g  180 (270)
                      . ....+..+++.+-. |.+.
T Consensus        73 ~~h~~~~~~al~~Gk~-v~~e   92 (332)
T 2glx_A           73 ELHREQTLAAIRAGKH-VLCE   92 (332)
T ss_dssp             GGHHHHHHHHHHTTCE-EEEC
T ss_pred             hHhHHHHHHHHHCCCe-EEEe
Confidence            5 55666667776544 4444

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.77  E-value=0.0056  Score=47.16  Aligned_cols=101  Identities=11%  Similarity=0.054  Sum_probs=67.4

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      ....+.++++||-.|+  |.|..+..+++.. .+|+++..+++..+.+++.+....-+..... +..+.+.  ..+.||+
T Consensus        64 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~-d~~~~~~--~~~~fD~  137 (231)
T 1vbf_A           64 DELDLHKGQKVLEIGT--GIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILG-DGTLGYE--EEKPYDR  137 (231)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEES-CGGGCCG--GGCCEEE
T ss_pred             HhcCCCCCCEEEEEcC--CCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEEC-Ccccccc--cCCCccE
Confidence            4456788999999984  4588888888764 8999999999988888854432101111111 2211111  1236999


Q ss_pred             EEeCCCc-chHHHHHHccccCCEEEEEc
Q 042426          154 YFENVGG-KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       154 v~d~~g~-~~~~~~~~~l~~~G~~v~~g  180 (270)
                      |+....- .....+.+.|+++|+++...
T Consensus       138 v~~~~~~~~~~~~~~~~L~pgG~l~~~~  165 (231)
T 1vbf_A          138 VVVWATAPTLLCKPYEQLKEGGIMILPI  165 (231)
T ss_dssp             EEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             EEECCcHHHHHHHHHHHcCCCcEEEEEE
Confidence            9876654 34567889999999988764

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.76  E-value=0.0072  Score=50.07  Aligned_cols=116  Identities=17%  Similarity=0.137  Sum_probs=73.4

Q ss_pred             ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC----HHH----HHHHHHHhCCC
Q 042426           58 TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARS----KEK----VDLLKHKFGFD  128 (270)
Q Consensus        58 ~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~----~~~----~~~~~~~~g~~  128 (270)
                      ..+..+.++.-+.++...+.--++.+|+|.|| |..|..+++++..+|+ +|++++++    .++    +...++.+...
T Consensus       169 qGTasV~lAal~~A~~i~g~~l~~~kVVv~GA-GaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~  247 (388)
T 1vl6_A          169 QGTAVVVSAAFLNALKLTEKKIEEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARI  247 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCTTTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCCCcEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHh
Confidence            34444444445555543332234579999998 9999999999999999 89999977    433    22222222211


Q ss_pred             -ceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcc
Q 042426          129 -DAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       129 -~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~  181 (270)
                       ... .... ++.+.++.     +|+++-+++.. ..+..++.|+++-.++.+.+
T Consensus       248 ~~~~-~~~~-~L~eav~~-----ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN  295 (388)
T 1vl6_A          248 TNPE-RLSG-DLETALEG-----ADFFIGVSRGNILKPEWIKKMSRKPVIFALAN  295 (388)
T ss_dssp             SCTT-CCCS-CHHHHHTT-----CSEEEECSCSSCSCHHHHTTSCSSCEEEECCS
T ss_pred             hhcc-Cchh-hHHHHHcc-----CCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC
Confidence             111 1122 56666654     89999988743 55677888888777766655

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=96.76  E-value=0.0068  Score=49.26  Aligned_cols=97  Identities=11%  Similarity=0.069  Sum_probs=65.5

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC------CceeecCCchhHHHHHHhHcCCCc
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGF------DDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      .++.+||++|  +|.|..+..+++..+ .+|+++..+++-.+.+++.+..      +.-+..... +..+.+.. ..+.|
T Consensus       107 ~~~~~VLdIG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~-D~~~~l~~-~~~~f  182 (314)
T 2b2c_A          107 PDPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEF  182 (314)
T ss_dssp             SSCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCE
T ss_pred             CCCCEEEEEc--CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEC-hHHHHHHh-cCCCc
Confidence            3457999998  566777888887654 5999999999989888855432      111222222 44444443 33479


Q ss_pred             cEEEeCCC-----------cchHHHHHHccccCCEEEEE
Q 042426          152 DIYFENVG-----------GKMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       152 d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~  179 (270)
                      |+|+-...           ...++.+.+.|+|+|.++.-
T Consensus       183 D~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~  221 (314)
T 2b2c_A          183 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQ  221 (314)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEE
Confidence            99985431           23577889999999999875

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=96.76  E-value=0.0046  Score=48.97  Aligned_cols=103  Identities=16%  Similarity=0.217  Sum_probs=68.3

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ....+.++.+||-+|  +|.|..+..+++..+.+|++++.++...+.+++..   |...-+..... ++.+ + ...++.
T Consensus        55 ~~~~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~  129 (273)
T 3bus_A           55 ALLDVRSGDRVLDVG--CGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYA-DAMD-L-PFEDAS  129 (273)
T ss_dssp             HHSCCCTTCEEEEES--CTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-CTTS-C-CSCTTC
T ss_pred             HhcCCCCCCEEEEeC--CCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC-cccc-C-CCCCCC
Confidence            456678899999998  56688888999888999999999998887776332   33211111111 1110 0 011236


Q ss_pred             ccEEEeCCC-----c--chHHHHHHccccCCEEEEEcc
Q 042426          151 IDIYFENVG-----G--KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       151 ~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ||+|+....     .  ..+..+.+.|+|+|+++....
T Consensus       130 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~  167 (273)
T 3bus_A          130 FDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADF  167 (273)
T ss_dssp             EEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             ccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            999985322     1  267888899999999987654

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.76  E-value=0.0039  Score=51.76  Aligned_cols=90  Identities=14%  Similarity=0.114  Sum_probs=66.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCY-VVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~-v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      .|.+|.|+|. |.+|..+++.++.+|++ |++..++..+.+... ++|+..+    .  ++.+.+.+     .|+|+.++
T Consensus       163 ~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-~~g~~~~----~--~l~ell~~-----aDvV~l~~  229 (364)
T 2j6i_A          163 EGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-KVGARRV----E--NIEELVAQ-----ADIVTVNA  229 (364)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-HTTEEEC----S--SHHHHHHT-----CSEEEECC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-hcCcEec----C--CHHHHHhc-----CCEEEECC
Confidence            5789999997 99999999999999997 999997765555555 6665311    1  34444433     89999988


Q ss_pred             Ccc-----hH-HHHHHccccCCEEEEEccc
Q 042426          159 GGK-----ML-DAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       159 g~~-----~~-~~~~~~l~~~G~~v~~g~~  182 (270)
                      ...     .+ ...+..|++++.++.++..
T Consensus       230 P~t~~t~~li~~~~l~~mk~ga~lIn~arG  259 (364)
T 2j6i_A          230 PLHAGTKGLINKELLSKFKKGAWLVNTARG  259 (364)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             CCChHHHHHhCHHHHhhCCCCCEEEECCCC
Confidence            642     22 4577888999888888763

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=96.76  E-value=0.028  Score=47.20  Aligned_cols=108  Identities=16%  Similarity=0.207  Sum_probs=71.0

Q ss_pred             hHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----------HhCC--Cce--e
Q 042426           67 TAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKH----------KFGF--DDA--F  131 (270)
Q Consensus        67 ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~----------~~g~--~~v--i  131 (270)
                      ..+..+.....++++++||=+|  +|+|..++++++..|+ +|+++..++.-.+.+++          .+|.  ..+  +
T Consensus       160 ~~i~~il~~l~l~~gd~VLDLG--CGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi  237 (438)
T 3uwp_A          160 DLVAQMIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLE  237 (438)
T ss_dssp             HHHHHHHHHHCCCTTCEEEEES--CTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEE
T ss_pred             HHHHHHHHhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE
Confidence            3344444667899999999998  7889999999998898 59999999865544431          3343  222  1


Q ss_pred             --ecCCchhHHHHHHhHcCCCccEEEeCC---Cc---chHHHHHHccccCCEEEEEccc
Q 042426          132 --NYKEEPDLDAALNRCFPEGIDIYFENV---GG---KMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       132 --~~~~~~~~~~~i~~~~~~~~d~v~d~~---g~---~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                        |..+. .+...+.     .+|+||-..   ..   ..+....+.|+|||+++.....
T Consensus       238 ~GD~~~l-p~~d~~~-----~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f  290 (438)
T 3uwp_A          238 RGDFLSE-EWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPF  290 (438)
T ss_dssp             ECCTTSH-HHHHHHH-----TCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCS
T ss_pred             ECcccCC-ccccccC-----CccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecc
Confidence              21222 2222221     389988422   11   2566778899999999987553

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.75  E-value=0.0095  Score=45.04  Aligned_cols=94  Identities=13%  Similarity=0.088  Sum_probs=63.2

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---------------Cc--ee--ecCCc
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF---------------DD--AF--NYKEE  136 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~---------------~~--vi--~~~~~  136 (270)
                      ..+.++.+||..|  +|.|..+..+++. |++|++++.|++-.+.++++.+.               ..  .+  |..+.
T Consensus        18 l~~~~~~~vLD~G--CG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l   94 (203)
T 1pjz_A           18 LNVVPGARVLVPL--CGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL   94 (203)
T ss_dssp             HCCCTTCEEEETT--TCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred             cccCCCCEEEEeC--CCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence            3467889999998  6778888888876 89999999999998888855432               11  11  22221


Q ss_pred             hhHHHHHHhHcCCCccEEEeCCCc---------chHHHHHHccccCCEEEEE
Q 042426          137 PDLDAALNRCFPEGIDIYFENVGG---------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       137 ~~~~~~i~~~~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~  179 (270)
                       .+.. .     +.||+|++...-         ..++...+.|+|+|+++.+
T Consensus        95 -~~~~-~-----~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           95 -TARD-I-----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             -THHH-H-----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             -Cccc-C-----CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence             1211 0     249999974321         1467788899999994433

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.75  E-value=0.0017  Score=53.16  Aligned_cols=77  Identities=8%  Similarity=0.017  Sum_probs=50.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-CCC-ceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-GFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~-g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +.+|||+||+|.+|..+++.+...|.+|++++++......+.+.+ +.. ...|..+..++.+.+.+.   ++|+||+++
T Consensus        20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih~A   96 (330)
T 2pzm_A           20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVHSA   96 (330)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEECC
Confidence            568999999999999999988888999999998543322111122 111 123444442344444432   499999999


Q ss_pred             Cc
Q 042426          159 GG  160 (270)
Q Consensus       159 g~  160 (270)
                      |.
T Consensus        97 ~~   98 (330)
T 2pzm_A           97 AA   98 (330)
T ss_dssp             CC
T ss_pred             cc
Confidence            73

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.74  E-value=0.0019  Score=49.86  Aligned_cols=97  Identities=14%  Similarity=0.123  Sum_probs=65.1

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHh---C-----CCceeecCCchhHHH
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVG-------CYVVGSARSKEKVDLLKHKF---G-----FDDAFNYKEEPDLDA  141 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g-------~~v~~~~~~~~~~~~~~~~~---g-----~~~vi~~~~~~~~~~  141 (270)
                      .++++++||-+|+  |.|..+..+++..+       .+|+++..+++..+.+++.+   +     ..++ ..... +..+
T Consensus        81 ~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v-~~~~~-d~~~  156 (227)
T 1r18_A           81 HLKPGARILDVGS--GSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQL-LIVEG-DGRK  156 (227)
T ss_dssp             TCCTTCEEEEESC--TTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSE-EEEES-CGGG
T ss_pred             hCCCCCEEEEECC--CccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCce-EEEEC-Cccc
Confidence            5788999999984  44888888888766       49999999998877776332   1     1111 11111 1111


Q ss_pred             HHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEE
Q 042426          142 ALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       142 ~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  179 (270)
                      .+..  .+.||+|+..... .....+.+.|+++|+++..
T Consensus       157 ~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~  193 (227)
T 1r18_A          157 GYPP--NAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  193 (227)
T ss_dssp             CCGG--GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             CCCc--CCCccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence            1111  1369999877665 3668889999999998864

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.73  E-value=0.0042  Score=50.40  Aligned_cols=91  Identities=13%  Similarity=0.125  Sum_probs=58.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHH--HHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLK--HKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~--~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      .+|+|+||+|.+|..+++.+...|.+|++++|+.. +.+.+.  +..+... ..|..+.+++.+.+.     ++|+||.+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~-----~~d~vi~~   86 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK-----KVDVVISA   86 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-----TCSEEEEC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc-----CCCEEEEC
Confidence            46999999999999999998888999999998764 333332  1335432 235554423333332     49999999


Q ss_pred             CCcc---hHHHHHHccccC---CEEE
Q 042426          158 VGGK---MLDAVLLNMRIC---GHIA  177 (270)
Q Consensus       158 ~g~~---~~~~~~~~l~~~---G~~v  177 (270)
                      ++..   .....++.++..   ++++
T Consensus        87 a~~~~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           87 LAFPQILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             CCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred             CchhhhHHHHHHHHHHHhcCCCCEEE
Confidence            9852   234444444432   4666

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.73  E-value=0.021  Score=43.66  Aligned_cols=91  Identities=8%  Similarity=-0.029  Sum_probs=61.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-ecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAF-NYKEEPDLDAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      +|+|.|+ |.+|..+++.+...|.+|+++++++++.+.+.+..+...+. |..+.    +.+.+..-.++|+++-+++..
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~----~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHK----EILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSH----HHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCH----HHHHhcCcccCCEEEEecCCc
Confidence            4899997 99999999999999999999999999888876456653221 22222    234443333699999999875


Q ss_pred             hHHH----HHHccccCCEEEE
Q 042426          162 MLDA----VLLNMRICGHIAV  178 (270)
Q Consensus       162 ~~~~----~~~~l~~~G~~v~  178 (270)
                      ..+.    ..+.+.+..+++.
T Consensus        77 ~~n~~~~~~a~~~~~~~~iia   97 (218)
T 3l4b_C           77 EVNLFIAQLVMKDFGVKRVVS   97 (218)
T ss_dssp             HHHHHHHHHHHHTSCCCEEEE
T ss_pred             HHHHHHHHHHHHHcCCCeEEE
Confidence            3332    2223334455554

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=96.72  E-value=0.005  Score=46.75  Aligned_cols=97  Identities=16%  Similarity=0.166  Sum_probs=65.6

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCCcc
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      ..++.+||-.|  +|.|..++.+++..  +.+|+++..+++..+.+++.   .+...-+..... +..+.+.. .++ ||
T Consensus        54 ~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~-~~~-fD  128 (210)
T 3c3p_A           54 IKQPQLVVVPG--DGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG-DPLGIAAG-QRD-ID  128 (210)
T ss_dssp             HHCCSEEEEES--CGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES-CHHHHHTT-CCS-EE
T ss_pred             hhCCCEEEEEc--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe-cHHHHhcc-CCC-CC
Confidence            34567899998  67888899999876  57999999999888777633   343222222222 34333322 234 99


Q ss_pred             EEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426          153 IYFENVGG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       153 ~v~d~~g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                      +|+-....    ..++.+.+.|+|+|.++.-
T Consensus       129 ~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  159 (210)
T 3c3p_A          129 ILFMDCDVFNGADVLERMNRCLAKNALLIAV  159 (210)
T ss_dssp             EEEEETTTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             EEEEcCChhhhHHHHHHHHHhcCCCeEEEEE
Confidence            98854322    3678888999999998864

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=96.72  E-value=0.0055  Score=48.35  Aligned_cols=99  Identities=13%  Similarity=0.043  Sum_probs=65.7

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCcc
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      ....+.++.+||=+|  +|.|..++.+++. |++|++++.+++-.+.+++..... ...+..+. +.  .......+.||
T Consensus        39 ~~l~l~~g~~VLDlG--cGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~-~~--~~~~~~~~~fD  112 (261)
T 3iv6_A           39 FLENIVPGSTVAVIG--ASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRCVTIDLLDI-TA--EIPKELAGHFD  112 (261)
T ss_dssp             HTTTCCTTCEEEEEC--TTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCT-TS--CCCGGGTTCCS
T ss_pred             HhcCCCCcCEEEEEe--CcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhccceeeeeec-cc--ccccccCCCcc
Confidence            445678899999998  6778888888875 889999999999999998554432 11222221 11  00011123699


Q ss_pred             EEEeCCCc---------chHHHHHHccccCCEEEEE
Q 042426          153 IYFENVGG---------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       153 ~v~d~~g~---------~~~~~~~~~l~~~G~~v~~  179 (270)
                      +|+.+..-         ..+....+++ |+|+++..
T Consensus       113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            99875321         1566677788 99998854

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.72  E-value=0.0034  Score=48.27  Aligned_cols=98  Identities=16%  Similarity=0.140  Sum_probs=65.6

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---C-----CCceeecCCchhHHHHHHhH
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKF---G-----FDDAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~---g-----~~~vi~~~~~~~~~~~i~~~  146 (270)
                      .++++++||-.|+  |.|..+..+++..|  .+|+++..++...+.+++.+   +     .+.+ ..... +......  
T Consensus        74 ~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v-~~~~~-d~~~~~~--  147 (226)
T 1i1n_A           74 QLHEGAKALDVGS--GSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRV-QLVVG-DGRMGYA--  147 (226)
T ss_dssp             TSCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSE-EEEES-CGGGCCG--
T ss_pred             hCCCCCEEEEEcC--CcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcE-EEEEC-CcccCcc--
Confidence            3778999999984  45888888888776  59999999998887776332   2     1221 11111 1111000  


Q ss_pred             cCCCccEEEeCCCc-chHHHHHHccccCCEEEEEc
Q 042426          147 FPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       147 ~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g  180 (270)
                      ..+.||+|+..... ..+..+.+.|+|+|+++..-
T Consensus       148 ~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          148 EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence            12369999876654 46788999999999998753

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.72  E-value=0.0062  Score=50.97  Aligned_cols=89  Identities=16%  Similarity=0.054  Sum_probs=65.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.++.|+|. |.+|..+++.++.+|.+|++..++..+.+... ++|+...    .  ++.+.+.+     .|+|+.++.
T Consensus       190 ~gktvGIIGl-G~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-~~G~~~~----~--~l~ell~~-----aDvV~l~~P  256 (393)
T 2nac_A          190 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTWH----A--TREDMYPV-----CDVVTLNCP  256 (393)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEEC----S--SHHHHGGG-----CSEEEECSC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-hcCceec----C--CHHHHHhc-----CCEEEEecC
Confidence            4779999997 99999999999999999999988765555555 6675321    1  34333333     789988876


Q ss_pred             c-----chH-HHHHHccccCCEEEEEcc
Q 042426          160 G-----KML-DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~-----~~~-~~~~~~l~~~G~~v~~g~  181 (270)
                      .     ..+ ...+..|+++..++.++.
T Consensus       257 lt~~t~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          257 LHPETEHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence            3     123 467788888888888775

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.71  E-value=0.014  Score=45.52  Aligned_cols=77  Identities=17%  Similarity=0.150  Sum_probs=54.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +|.|.|++|.+|...++.+... +.+++......+..+.+. ..+++-++|+..+....+.+......+.++|+.++|-
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~-~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~   79 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT-DGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF   79 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH-HTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh-ccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence            5899999999999999988765 788887775544444443 3366778888876444444444433468888888874

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.70  E-value=0.017  Score=46.89  Aligned_cols=89  Identities=11%  Similarity=0.089  Sum_probs=63.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHH-HHHhHcCCCccEEEeCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDA-ALNRCFPEGIDIYFENV  158 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~-~i~~~~~~~~d~v~d~~  158 (270)
                      .+|.|+|. |.+|.+.++.++..|.  +|++.++++++.+.+. +.|...... .   +..+ .+.     ++|+||-|+
T Consensus        34 ~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-~~G~~~~~~-~---~~~~~~~~-----~aDvVilav  102 (314)
T 3ggo_A           34 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGT-T---SIAKVEDF-----SPDFVMLSS  102 (314)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEE-S---CTTGGGGG-----CCSEEEECS
T ss_pred             CEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HCCCcchhc-C---CHHHHhhc-----cCCEEEEeC
Confidence            58999996 9999999999999998  9999999999998888 777631111 1   1111 121     389999998


Q ss_pred             Ccch----HHHHHHccccCCEEEEEcc
Q 042426          159 GGKM----LDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       159 g~~~----~~~~~~~l~~~G~~v~~g~  181 (270)
                      ....    +......++++..++.++.
T Consensus       103 p~~~~~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A          103 PVRTFREIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             CGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             CHHHHHHHHHHHhhccCCCcEEEECCC
Confidence            7643    3444455667777766654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.70  E-value=0.0082  Score=49.45  Aligned_cols=75  Identities=15%  Similarity=0.173  Sum_probs=49.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHh------CCC-ceeecCCchhHHHHHHhHcCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK----EKVDLLKHKF------GFD-DAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~----~~~~~~~~~~------g~~-~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.    ++.+.+.+.+      +.. ...|..+..++.+.+.     
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----  101 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-----  101 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-----
Confidence            46899999999999999998888899999999854    2344333222      111 1124444312333332     


Q ss_pred             CccEEEeCCCc
Q 042426          150 GIDIYFENVGG  160 (270)
Q Consensus       150 ~~d~v~d~~g~  160 (270)
                      ++|+||.+++.
T Consensus       102 ~~d~vih~A~~  112 (352)
T 1sb8_A          102 GVDYVLHQAAL  112 (352)
T ss_dssp             TCSEEEECCSC
T ss_pred             CCCEEEECCcc
Confidence            49999999983

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.69  E-value=0.011  Score=48.21  Aligned_cols=88  Identities=9%  Similarity=0.060  Sum_probs=65.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      .|.+|.|+|. |.+|...++.++.+|.+|++..+ +.++ +... ++|...    .+  ++.+.+.+     .|+|+-++
T Consensus       145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~~g~~~----~~--~l~ell~~-----aDvVil~~  210 (320)
T 1gdh_A          145 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS-SDEA-SYQATF----HD--SLDSLLSV-----SQFFSLNA  210 (320)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHH-HHTCEE----CS--SHHHHHHH-----CSEEEECC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhh-hcCcEE----cC--CHHHHHhh-----CCEEEEec
Confidence            4679999997 99999999999999999999998 6655 3444 667631    11  34444443     89999988


Q ss_pred             Ccc-----hH-HHHHHccccCCEEEEEcc
Q 042426          159 GGK-----ML-DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       159 g~~-----~~-~~~~~~l~~~G~~v~~g~  181 (270)
                      ...     .+ ...+..+++++.++.++.
T Consensus       211 p~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          211 PSTPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             cCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            632     22 456788999999988876

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=96.69  E-value=0.0025  Score=49.41  Aligned_cols=101  Identities=14%  Similarity=0.166  Sum_probs=65.5

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHH-hHcCC
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALN-RCFPE  149 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~-~~~~~  149 (270)
                      .....++.+||-+|  +|.|..++.+++.. +.+|+++..+++..+.+++.   .+...-+..... +..+.+. .. .+
T Consensus        66 ~~~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~-~~  141 (232)
T 3ntv_A           66 LIRMNNVKNILEIG--TAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEG-NALEQFENVN-DK  141 (232)
T ss_dssp             HHHHHTCCEEEEEC--CSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES-CGGGCHHHHT-TS
T ss_pred             HHhhcCCCEEEEEe--CchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-CHHHHHHhhc-cC
Confidence            34456778999998  67788888888854 67999999999888777643   344211212111 2222222 11 34


Q ss_pred             CccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426          150 GIDIYFENVGG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       150 ~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                      .||+|+-....    ..++.+.+.|+|+|.++.-
T Consensus       142 ~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d  175 (232)
T 3ntv_A          142 VYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITD  175 (232)
T ss_dssp             CEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            69999854432    2567888999999999874

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.69  E-value=0.0031  Score=51.81  Aligned_cols=69  Identities=17%  Similarity=0.164  Sum_probs=48.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      ++.+|||+||+|.+|..+++.+...|.+|+++++++.+       .+.. ...|..+...+.+.+.     ++|+||.++
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~-----~~d~vih~A   85 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIM-----GVSAVLHLG   85 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHT-----TCSEEEECC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHh-----CCCEEEECC
Confidence            35689999999999999999999999999999987644       1222 1234544423333332     499999988


Q ss_pred             Cc
Q 042426          159 GG  160 (270)
Q Consensus       159 g~  160 (270)
                      +.
T Consensus        86 ~~   87 (347)
T 4id9_A           86 AF   87 (347)
T ss_dssp             CC
T ss_pred             cc
Confidence            73

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.68  E-value=0.003  Score=52.33  Aligned_cols=37  Identities=14%  Similarity=0.187  Sum_probs=32.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHH--cCCEEEEEeCCHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKL--VGCYVVGSARSKE  116 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~--~g~~v~~~~~~~~  116 (270)
                      .+.+|||+||+|.+|..+++.+..  .|++|++++++..
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            357899999999999999998887  8999999997654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.68  E-value=0.0012  Score=52.32  Aligned_cols=95  Identities=12%  Similarity=0.058  Sum_probs=60.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +.+|+|+||+|++|..+++.+...|++|+++++++.+..    ..+.. ...|..+..++.+.+.     ++|++++++|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~-----~~D~vi~~Ag   73 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVA-----GCDGIVHLGG   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHT-----TCSEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHc-----CCCEEEECCC
Confidence            357999999999999999998888999999998764332    11111 1234444423333332     4999999987


Q ss_pred             cc---hHH-----------HHHHcccc--CCEEEEEccccc
Q 042426          160 GK---MLD-----------AVLLNMRI--CGHIAVCGMISQ  184 (270)
Q Consensus       160 ~~---~~~-----------~~~~~l~~--~G~~v~~g~~~~  184 (270)
                      ..   .++           ..++.+.+  .++++.+++...
T Consensus        74 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~  114 (267)
T 3rft_A           74 ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHT  114 (267)
T ss_dssp             CCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred             CcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHH
Confidence            41   111           22233332  368998876543

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=96.68  E-value=0.0051  Score=49.39  Aligned_cols=100  Identities=11%  Similarity=0.071  Sum_probs=67.6

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      .+.++.+||-+|  +|.|..+..+++..|++|++++.++...+.+++.   .|...-+..... ++.+ + ...++.||+
T Consensus        79 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~fD~  153 (297)
T 2o57_A           79 VLQRQAKGLDLG--AGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYG-SFLE-I-PCEDNSYDF  153 (297)
T ss_dssp             CCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEEC-CTTS-C-SSCTTCEEE
T ss_pred             CCCCCCEEEEeC--CCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEc-Cccc-C-CCCCCCEeE
Confidence            678899999998  5678888889988899999999999887777633   233211111111 1111 0 011236999


Q ss_pred             EEeCCCc-------chHHHHHHccccCCEEEEEcc
Q 042426          154 YFENVGG-------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       154 v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      |+....-       ..+..+.+.|+|+|+++....
T Consensus       154 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  188 (297)
T 2o57_A          154 IWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  188 (297)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            9875431       257889999999999987654

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=96.67  E-value=0.0037  Score=51.31  Aligned_cols=99  Identities=19%  Similarity=0.172  Sum_probs=66.1

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHh-----CC-CceeecCCchhHHHHHHhHcCCC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKF-----GF-DDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~-----g~-~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ..++.+||.+|  +|.|..+..+++..+ .+|+++..+++-.+.+++.+     |. +.-+..... +..+.+.....+.
T Consensus       118 ~~~~~~VLdIG--~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~-D~~~~l~~~~~~~  194 (334)
T 1xj5_A          118 IPNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG-DGVAFLKNAAEGS  194 (334)
T ss_dssp             SSCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES-CHHHHHHTSCTTC
T ss_pred             CCCCCEEEEEC--CCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEC-CHHHHHHhccCCC
Confidence            45668999998  567778888888764 59999999999888887433     21 111222222 4444444332347


Q ss_pred             ccEEEeCCC-----------cchHHHHHHccccCCEEEEE
Q 042426          151 IDIYFENVG-----------GKMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       151 ~d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~  179 (270)
                      ||+|+-...           ...++.+.+.|+++|.++.-
T Consensus       195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  234 (334)
T 1xj5_A          195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  234 (334)
T ss_dssp             EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            999885322           13577889999999999875

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=96.67  E-value=0.0047  Score=50.02  Aligned_cols=99  Identities=15%  Similarity=0.055  Sum_probs=65.5

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC-------CCceeecCCchhHHHHHHhHcCC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFG-------FDDAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g-------~~~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      ..++.+||++|  +|.|..+..+++..+ .+|+++..+++-.+.+++.+.       ... +..... +..+.+.....+
T Consensus        93 ~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~-v~~~~~-D~~~~~~~~~~~  168 (304)
T 3bwc_A           93 HPKPERVLIIG--GGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPR-ATVRVG-DGLAFVRQTPDN  168 (304)
T ss_dssp             SSSCCEEEEEE--CTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTT-EEEEES-CHHHHHHSSCTT
T ss_pred             CCCCCeEEEEc--CCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCc-EEEEEC-cHHHHHHhccCC
Confidence            35678999998  566777888887654 599999999988888874331       111 112122 444433322234


Q ss_pred             CccEEEeCCC-----------cchHHHHHHccccCCEEEEEc
Q 042426          150 GIDIYFENVG-----------GKMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       150 ~~d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~g  180 (270)
                      .||+|+-...           ...++.+.+.|+|+|.++...
T Consensus       169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  210 (304)
T 3bwc_A          169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG  210 (304)
T ss_dssp             CEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            7999885432           235778899999999998753

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.67  E-value=0.017  Score=46.13  Aligned_cols=87  Identities=15%  Similarity=0.134  Sum_probs=61.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc-
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG-  160 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~-  160 (270)
                      .+|.|+|. |.+|...++.+...|.+|++.++++++.+.+. +.|...    ..  +..+.+.+     .|+||-|+.. 
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~----~~--~~~~~~~~-----aDvvi~~vp~~   68 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA-ALGAER----AA--TPCEVVES-----CPVTFAMLADP   68 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEE----CS--SHHHHHHH-----CSEEEECCSSH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HCCCee----cC--CHHHHHhc-----CCEEEEEcCCH
Confidence            37899997 99999999999889999999999999888887 556521    11  34444443     6888888874 


Q ss_pred             chHHHHH-------HccccCCEEEEEcc
Q 042426          161 KMLDAVL-------LNMRICGHIAVCGM  181 (270)
Q Consensus       161 ~~~~~~~-------~~l~~~G~~v~~g~  181 (270)
                      ..+...+       ..++++..++..+.
T Consensus        69 ~~~~~v~~~~~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           69 AAAEEVCFGKHGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHcCcchHhhcCCCCCEEEeCCC
Confidence            3443333       45566666665543

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=96.66  E-value=0.0011  Score=51.97  Aligned_cols=103  Identities=11%  Similarity=0.006  Sum_probs=65.5

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhH---
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRC---  146 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~---  146 (270)
                      .....++.+||-+|  ++.|..++.+++.+  +.+|+++..+++..+.+++   ..|...-+..... +..+.+...   
T Consensus        55 l~~~~~~~~VLDiG--~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~~~~~  131 (242)
T 3r3h_A           55 LIRLTRAKKVLELG--TFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG-PALDTLHSLLNE  131 (242)
T ss_dssp             HHHHHTCSEEEEEE--SCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES-CHHHHHHHHHHH
T ss_pred             HHhhcCcCEEEEee--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHhhc
Confidence            33455678999998  66788888888876  5799999988764433332   4465322222222 333333322   


Q ss_pred             c-CCCccEEEeCCCc----chHHHHHHccccCCEEEEEc
Q 042426          147 F-PEGIDIYFENVGG----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       147 ~-~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  180 (270)
                      . .+.||+||-....    ..++.+.+.|+|+|.++.-.
T Consensus       132 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  170 (242)
T 3r3h_A          132 GGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDN  170 (242)
T ss_dssp             HCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEEC
Confidence            1 2469998754443    25788899999999998743

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.65  E-value=0.014  Score=46.49  Aligned_cols=89  Identities=11%  Similarity=0.087  Sum_probs=61.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +|.|+|+ |.+|.+.++.+...|.  +|++..+++++.+.++ +.|..... ..   +..+.+.+    ++|+|+-|+..
T Consensus         3 ~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-~~g~~~~~-~~---~~~~~~~~----~aDvVilavp~   72 (281)
T 2g5c_A            3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEG-TT---SIAKVEDF----SPDFVMLSSPV   72 (281)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEE-ES---CGGGGGGT----CCSEEEECSCH
T ss_pred             EEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-HCCCcccc-cC---CHHHHhcC----CCCEEEEcCCH
Confidence            6899996 9999999999988887  9999999998888887 77763111 11   12112210    38999999986


Q ss_pred             ch----HHHHHHccccCCEEEEEcc
Q 042426          161 KM----LDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       161 ~~----~~~~~~~l~~~G~~v~~g~  181 (270)
                      ..    +......++++..++.++.
T Consensus        73 ~~~~~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           73 RTFREIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             HHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHHHHHhhCCCCcEEEECCC
Confidence            43    3334445667776666554

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=96.65  E-value=0.0096  Score=48.82  Aligned_cols=86  Identities=17%  Similarity=0.239  Sum_probs=60.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|...++.++..|.+|++..++.++ +... ++|..    ..   ++.+.+.+     .|+|+.++.
T Consensus       145 ~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~----~~---~l~e~l~~-----aDiVil~vp  209 (333)
T 2d0i_A          145 YGKKVGILGM-GAIGKAIARRLIPFGVKLYYWSRHRKV-NVEK-ELKAR----YM---DIDELLEK-----SDIVILALP  209 (333)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCH-HHHH-HHTEE----EC---CHHHHHHH-----CSEEEECCC
T ss_pred             CcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCce----ec---CHHHHHhh-----CCEEEEcCC
Confidence            4679999997 999999999999999999999987765 4444 55542    11   33333433     788888876


Q ss_pred             cc-----hH-HHHHHccccCCEEEEEcc
Q 042426          160 GK-----ML-DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~~-----~~-~~~~~~l~~~G~~v~~g~  181 (270)
                      ..     .+ ...+..++++ .++.++.
T Consensus       210 ~~~~t~~~i~~~~~~~mk~g-ilin~sr  236 (333)
T 2d0i_A          210 LTRDTYHIINEERVKKLEGK-YLVNIGR  236 (333)
T ss_dssp             CCTTTTTSBCHHHHHHTBTC-EEEECSC
T ss_pred             CChHHHHHhCHHHHhhCCCC-EEEECCC
Confidence            42     22 2456677777 7776654

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.65  E-value=0.0099  Score=49.04  Aligned_cols=91  Identities=15%  Similarity=0.147  Sum_probs=65.1

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVK-LVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~-~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      -.|.+|.|+|. |.+|...++.++ ..|.+|++..++.++.+... ++|...+    .  ++.+.+.+     .|+|+.+
T Consensus       161 l~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~-~~g~~~~----~--~l~ell~~-----aDvVil~  227 (348)
T 2w2k_A          161 PRGHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDVAPADAETEK-ALGAERV----D--SLEELARR-----SDCVSVS  227 (348)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHTCEEC----S--SHHHHHHH-----CSEEEEC
T ss_pred             CCCCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECCCCcchhhHh-hcCcEEe----C--CHHHHhcc-----CCEEEEe
Confidence            34789999997 999999999999 99999999998776655555 5665321    1  34444443     7899888


Q ss_pred             CCcc-----hH-HHHHHccccCCEEEEEccc
Q 042426          158 VGGK-----ML-DAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       158 ~g~~-----~~-~~~~~~l~~~G~~v~~g~~  182 (270)
                      +...     .+ ...+..|+++..++.++..
T Consensus       228 vp~~~~t~~li~~~~l~~mk~gailin~srg  258 (348)
T 2w2k_A          228 VPYMKLTHHLIDEAFFAAMKPGSRIVNTARG  258 (348)
T ss_dssp             CCCSGGGTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred             CCCChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence            7631     22 3566778888888777653

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.64  E-value=0.0079  Score=47.56  Aligned_cols=97  Identities=20%  Similarity=0.097  Sum_probs=66.0

Q ss_pred             ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCceeecCCch
Q 042426           60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEP  137 (270)
Q Consensus        60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~  137 (270)
                      -+||....+...+.+..---.|.+++|.|++.-+|.-+++++...  |++|++..+..                    . 
T Consensus       137 ~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t--------------------~-  195 (281)
T 2c2x_A          137 PLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT--------------------R-  195 (281)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC--------------------S-
T ss_pred             CCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch--------------------h-
Confidence            345544445555544332346889999998666899999999888  88988764221                    2 


Q ss_pred             hHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccc
Q 042426          138 DLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       138 ~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      ++.+.+++     +|++|.++|.+.+ -.-+.++++..++.+|...
T Consensus       196 ~L~~~~~~-----ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~r  235 (281)
T 2c2x_A          196 DLPALTRQ-----ADIVVAAVGVAHL-LTADMVRPGAAVIDVGVSR  235 (281)
T ss_dssp             CHHHHHTT-----CSEEEECSCCTTC-BCGGGSCTTCEEEECCEEE
T ss_pred             HHHHHHhh-----CCEEEECCCCCcc-cCHHHcCCCcEEEEccCCC
Confidence            45555544     8999999997643 3334578888888888743

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=96.63  E-value=0.0068  Score=49.56  Aligned_cols=75  Identities=24%  Similarity=0.285  Sum_probs=48.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HhC-----CC-ceeecCCchhHHHHHHhHcCCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH--KFG-----FD-DAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~--~~g-----~~-~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+.+  .+.     .. ...|..+..++.+.+.     ++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~   78 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK-----GC   78 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT-----TC
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc-----CC
Confidence            35789999999999999999888889999999887653322220  121     11 1124444323444432     48


Q ss_pred             cEEEeCCC
Q 042426          152 DIYFENVG  159 (270)
Q Consensus       152 d~v~d~~g  159 (270)
                      |+||.+++
T Consensus        79 d~Vih~A~   86 (337)
T 2c29_D           79 TGVFHVAT   86 (337)
T ss_dssp             SEEEECCC
T ss_pred             CEEEEecc
Confidence            99999875

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.63  E-value=0.013  Score=46.69  Aligned_cols=88  Identities=16%  Similarity=0.069  Sum_probs=60.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++   .++      +. .+.+ .  .+|+|++|+
T Consensus       121 ~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~------~~-~l~~-l--~~DivInaT  186 (282)
T 3fbt_A          121 KNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VIS------YD-ELSN-L--KGDVIINCT  186 (282)
T ss_dssp             TTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEE------HH-HHTT-C--CCSEEEECS
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---ccc------HH-HHHh-c--cCCEEEECC
Confidence            5789999997 9999999999999999 99999999988776653332   222      22 1222 2  499999998


Q ss_pred             Ccch------HHHHHHccccCCEEEEEcc
Q 042426          159 GGKM------LDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       159 g~~~------~~~~~~~l~~~G~~v~~g~  181 (270)
                      ....      .......++++..++.+-.
T Consensus       187 p~Gm~~~~~~~pi~~~~l~~~~~v~DlvY  215 (282)
T 3fbt_A          187 PKGMYPKEGESPVDKEVVAKFSSAVDLIY  215 (282)
T ss_dssp             STTSTTSTTCCSSCHHHHTTCSEEEESCC
T ss_pred             ccCccCCCccCCCCHHHcCCCCEEEEEee
Confidence            5321      1113445667776666543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=96.63  E-value=0.0044  Score=50.16  Aligned_cols=69  Identities=14%  Similarity=0.187  Sum_probs=40.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +.+|||+||+|.+|..+++.+...|.+|++++++..+    . .   ....|..+..++.+.+...   ++|+||.+++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~-~---~~~~Dl~d~~~~~~~~~~~---~~d~vih~A~~   70 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----P-K---FEQVNLLDSNAVHHIIHDF---QPHVIVHCAAE   70 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHH---CCSEEEECC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----C-C---eEEecCCCHHHHHHHHHhh---CCCEEEECCcc
Confidence            4589999999999999999888889999999976543    1 1   1112333321333333322   48999999874

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.63  E-value=0.00094  Score=54.09  Aligned_cols=119  Identities=13%  Similarity=0.010  Sum_probs=72.1

Q ss_pred             cccCchhhhHHHHhhhh--------cC-CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-
Q 042426           59 GILGMPGLTAYGGLHEL--------CS-PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-  128 (270)
Q Consensus        59 a~l~~~~~ta~~~l~~~--------~~-~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-  128 (270)
                      +-+||....+...+.+.        .+ --.|.+++|.|++.-+|..+++++...|++|++..++..+.....++++.. 
T Consensus       146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~  225 (320)
T 1edz_A          146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK  225 (320)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC
T ss_pred             CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc
Confidence            44565555555555442        12 235789999998446799999999999999998876633221111133321 


Q ss_pred             cee-ec--CCchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEccc
Q 042426          129 DAF-NY--KEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       129 ~vi-~~--~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      +.. ..  .+..++.+.+++     +|+|+.++|.+.+--.-+.++++..++.+|..
T Consensus       226 ~~~t~~~~t~~~~L~e~l~~-----ADIVIsAtg~p~~vI~~e~vk~GavVIDVgi~  277 (320)
T 1edz_A          226 HHVEDLGEYSEDLLKKCSLD-----SDVVITGVPSENYKFPTEYIKEGAVCINFACT  277 (320)
T ss_dssp             CEEEEEEECCHHHHHHHHHH-----CSEEEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             ccccccccccHhHHHHHhcc-----CCEEEECCCCCcceeCHHHcCCCeEEEEcCCC
Confidence            111 00  111156666666     99999999986321122346888788888774

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.63  E-value=0.004  Score=48.25  Aligned_cols=101  Identities=7%  Similarity=-0.108  Sum_probs=65.2

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF-DDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      .+++.+||-.|  +|.|..+..+++....+|++++.+++-.+.+++.... ..-+..... ++.+.......+.||+|+.
T Consensus        58 ~~~~~~vLDiG--cGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~fD~V~~  134 (236)
T 1zx0_A           58 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGILY  134 (236)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEEE
T ss_pred             CCCCCeEEEEe--ccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEec-CHHHhhcccCCCceEEEEE
Confidence            46788999998  5677777777654444999999999988888843321 111222222 4443322222347999987


Q ss_pred             -CCC----cc-------hHHHHHHccccCCEEEEEcc
Q 042426          157 -NVG----GK-------MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       157 -~~g----~~-------~~~~~~~~l~~~G~~v~~g~  181 (270)
                       +..    ..       .+..+.+.|+|+|+++.+..
T Consensus       135 d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~  171 (236)
T 1zx0_A          135 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL  171 (236)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred             CCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence             322    11       26778899999999987644

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.62  E-value=0.0083  Score=53.39  Aligned_cols=103  Identities=19%  Similarity=0.160  Sum_probs=64.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-H-HHHHHHHHHhCCCceeecCCc-hh---HHHHHHhHcCCCccE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-K-EKVDLLKHKFGFDDAFNYKEE-PD---LDAALNRCFPEGIDI  153 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~-~~~~~~~~~~g~~~vi~~~~~-~~---~~~~i~~~~~~~~d~  153 (270)
                      .|.+++|+||++|+|.+.++.+...|++|++..+. . +-.+.++ +.|........+. ++   +.+.+.+.. |++|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~-~~g~~~~~~~~Dv~~~~~~~~~~~~~~~-G~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIK-AAGGEAWPDQHDVAKDSEAIIKNVIDKY-GTIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHH-hcCCeEEEEEcChHHHHHHHHHHHHHhc-CCCCE
Confidence            36789999999999999999999999999998742 2 2233444 4443222211111 12   222332222 36999


Q ss_pred             EEeCCCcc-----------h---------------HHHHHHccc--cCCEEEEEccccc
Q 042426          154 YFENVGGK-----------M---------------LDAVLLNMR--ICGHIAVCGMISQ  184 (270)
Q Consensus       154 v~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  184 (270)
                      +++++|..           .               .+.++..|.  .+|+++.+++...
T Consensus       399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag  457 (604)
T 2et6_A          399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG  457 (604)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            99999831           0               244555563  3589999887544

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=96.62  E-value=0.0024  Score=53.37  Aligned_cols=73  Identities=16%  Similarity=0.186  Sum_probs=49.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +.+|||+||+|.+|..+++.+...|.+|++++++..+..... ..+... ..|..+..++.+.+.     ++|+||.+++
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-----~~d~Vih~A~  102 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-MFCDEFHLVDLRVMENCLKVTE-----GVDHVFNLAA  102 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-GTCSEEEECCTTSHHHHHHHHT-----TCSEEEECCC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-cCCceEEECCCCCHHHHHHHhC-----CCCEEEECce
Confidence            458999999999999999988888999999998765432211 112221 234444322333332     4999999987

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.61  E-value=0.012  Score=54.12  Aligned_cols=82  Identities=20%  Similarity=0.222  Sum_probs=56.4

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHH-HcCC-EEEEEeCCHH---HH----HHHHHHhCCC---ceeecCCchhHHHHHHh
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVK-LVGC-YVVGSARSKE---KV----DLLKHKFGFD---DAFNYKEEPDLDAALNR  145 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~-~~g~-~v~~~~~~~~---~~----~~~~~~~g~~---~vi~~~~~~~~~~~i~~  145 (270)
                      +.++.+++|+|++|++|.++++.+. ..|+ +|+.++++..   +.    +.++ ..|..   ...|..+..+..+.+.+
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~G~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLT-AYGAEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHH
Confidence            4678899999999999999998776 7899 5888888732   22    2333 44653   12355555345555555


Q ss_pred             HcCC-CccEEEeCCCc
Q 042426          146 CFPE-GIDIYFENVGG  160 (270)
Q Consensus       146 ~~~~-~~d~v~d~~g~  160 (270)
                      .... ++|++++++|.
T Consensus       606 ~~~~~~id~lVnnAGv  621 (795)
T 3slk_A          606 IPDEHPLTAVVHAAGV  621 (795)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             HHHhCCCEEEEECCCc
Confidence            4333 78999999983

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=96.60  E-value=0.012  Score=48.83  Aligned_cols=86  Identities=13%  Similarity=0.137  Sum_probs=63.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      |.+|.|+|. |.+|..+++.++.+|.+|++..++. +.+.+. +.|..    +.   ++.+.+.+     .|+|+-++..
T Consensus       176 gktvGIIGl-G~IG~~vA~~l~~fG~~V~~~d~~~-~~~~~~-~~g~~----~~---~l~ell~~-----aDvV~l~~Pl  240 (365)
T 4hy3_A          176 GSEIGIVGF-GDLGKALRRVLSGFRARIRVFDPWL-PRSMLE-ENGVE----PA---SLEDVLTK-----SDFIFVVAAV  240 (365)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHTTSCCEEEEECSSS-CHHHHH-HTTCE----EC---CHHHHHHS-----CSEEEECSCS
T ss_pred             CCEEEEecC-CcccHHHHHhhhhCCCEEEEECCCC-CHHHHh-hcCee----eC---CHHHHHhc-----CCEEEEcCcC
Confidence            779999997 9999999999999999999999774 334444 55653    11   45444544     7999887753


Q ss_pred             c------hHHHHHHccccCCEEEEEcc
Q 042426          161 K------MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       161 ~------~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .      .-...+..|++++.++.++.
T Consensus       241 t~~T~~li~~~~l~~mk~gailIN~aR  267 (365)
T 4hy3_A          241 TSENKRFLGAEAFSSMRRGAAFILLSR  267 (365)
T ss_dssp             SCC---CCCHHHHHTSCTTCEEEECSC
T ss_pred             CHHHHhhcCHHHHhcCCCCcEEEECcC
Confidence            1      23577888999999998874

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=96.60  E-value=0.012  Score=50.40  Aligned_cols=93  Identities=16%  Similarity=0.161  Sum_probs=59.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD--AFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +.+|+|+| +|++|..+++.+...|.+|++.+++.++.+.+.++++...  ..|..+..++.+.+.     ++|+|++|+
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~-----~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA-----KHDLVISLI   76 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT-----TSSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc-----CCcEEEECC
Confidence            46799998 5999999999888889999999999887766553443211  124433313333332     499999999


Q ss_pred             Ccc-hHHHHHHccccCCEEEEE
Q 042426          159 GGK-MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       159 g~~-~~~~~~~~l~~~G~~v~~  179 (270)
                      +.. .......++.++..++..
T Consensus        77 ~~~~~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           77 PYTFHATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             C--CHHHHHHHHHHHTCEEEES
T ss_pred             ccccchHHHHHHHhCCCeEEEe
Confidence            863 222344556666666554

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.60  E-value=0.0032  Score=51.13  Aligned_cols=75  Identities=12%  Similarity=0.199  Sum_probs=49.4

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      .++..+|||+||+|.+|..+++.+...|.+|++++++..+ +    .++... ..|..+..++.+.+..   +++|+||.
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~----~l~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih   80 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K----LPNVEMISLDIMDSQRVKKVISD---IKPDYIFH   80 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C----CTTEEEEECCTTCHHHHHHHHHH---HCCSEEEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c----cceeeEEECCCCCHHHHHHHHHh---cCCCEEEE
Confidence            3456789999999999999999988889999999987654 2    122211 2344444233333332   25899999


Q ss_pred             CCCc
Q 042426          157 NVGG  160 (270)
Q Consensus       157 ~~g~  160 (270)
                      +++.
T Consensus        81 ~A~~   84 (321)
T 2pk3_A           81 LAAK   84 (321)
T ss_dssp             CCSC
T ss_pred             cCcc
Confidence            9874

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.60  E-value=0.005  Score=49.22  Aligned_cols=64  Identities=9%  Similarity=0.146  Sum_probs=45.4

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      ++..+|||+||+|.+|..+++.+...|.+|++++++.               .|..+..++.+.+.+.   ++|+||.++
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~---~~d~vih~A   71 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEK---KPNVVINCA   71 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHH---CCSEEEECC
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhc---CCCEEEECC
Confidence            4567899999999999999998888899999998751               2333332333334322   488999988


Q ss_pred             Cc
Q 042426          159 GG  160 (270)
Q Consensus       159 g~  160 (270)
                      +.
T Consensus        72 ~~   73 (292)
T 1vl0_A           72 AH   73 (292)
T ss_dssp             CC
T ss_pred             cc
Confidence            73

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.59  E-value=0.01  Score=46.45  Aligned_cols=105  Identities=11%  Similarity=0.089  Sum_probs=69.6

Q ss_pred             HhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHc
Q 042426           71 GLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        71 ~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      ++.....+.++.+||-.|  +|.|..+..+++..+.+|++++.++...+.+++.   .|...-+..... ++.. + ...
T Consensus        37 ~l~~l~~~~~~~~vLDiG--~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~-~-~~~  111 (257)
T 3f4k_A           37 AVSFINELTDDAKIADIG--CGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITG-SMDN-L-PFQ  111 (257)
T ss_dssp             HHTTSCCCCTTCEEEEET--CTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-CTTS-C-SSC
T ss_pred             HHHHHhcCCCCCeEEEeC--CCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC-Chhh-C-CCC
Confidence            444445778899999998  5679999999998888999999999888777633   343211111111 1100 0 011


Q ss_pred             CCCccEEEeCCCc------chHHHHHHccccCCEEEEEc
Q 042426          148 PEGIDIYFENVGG------KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       148 ~~~~d~v~d~~g~------~~~~~~~~~l~~~G~~v~~g  180 (270)
                      .+.||+|+....-      ..+..+.+.|+|+|+++...
T Consensus       112 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          112 NEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             TTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            2369999754321      36788889999999998765

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.58  E-value=0.0075  Score=46.54  Aligned_cols=102  Identities=10%  Similarity=0.138  Sum_probs=66.0

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC-Cceee-cCCchhHHHHHHhHcCCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGF-DDAFN-YKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~-~~vi~-~~~~~~~~~~i~~~~~~~  150 (270)
                      ....++++++||-.|+  |.|..+..+++..| .+|+++..+++..+.+++.... .++.- ..+..+... ... ..+.
T Consensus        68 ~~~~~~~~~~VLDlGc--G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~-~~~~  143 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE-YAN-IVEK  143 (230)
T ss_dssp             CCCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG-GTT-TSCC
T ss_pred             cccCCCCCCEEEEEcc--cCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCccc-ccc-cCcc
Confidence            3345778999999984  44888888998876 5999999999888877633322 22211 111101000 000 1136


Q ss_pred             ccEEEeCCCcc-----hHHHHHHccccCCEEEEE
Q 042426          151 IDIYFENVGGK-----MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       151 ~d~v~d~~g~~-----~~~~~~~~l~~~G~~v~~  179 (270)
                      ||+|+.....+     .+..+.+.|+|+|+++..
T Consensus       144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          144 VDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            99999655432     477888899999999886

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=96.58  E-value=0.16  Score=41.74  Aligned_cols=137  Identities=9%  Similarity=-0.021  Sum_probs=80.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHc--CCEEEEE-eCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLV--GCYVVGS-ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~-~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      -+|.|+|. |.+|...+..++..  +++++++ ++++++.+.+.+++|. .++  .   ++.+.+.+   ..+|+|+-|+
T Consensus        14 ~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~--~---~~~~ll~~---~~~D~V~i~t   83 (354)
T 3q2i_A           14 IRFALVGC-GRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH--A---SLTDMLAQ---TDADIVILTT   83 (354)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE--S---CHHHHHHH---CCCSEEEECS
T ss_pred             ceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee--C---CHHHHhcC---CCCCEEEECC
Confidence            47999997 99998877777665  6787754 5667777766657886 232  1   45555543   2499999999


Q ss_pred             Ccc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHH-Hhhccee-eeccccCcccchHHHHHHHHHHHHCCcee
Q 042426          159 GGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQV-VGKRICM-EGFLAGDFYHQYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       159 g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  235 (270)
                      ... ....+..++..+-. +.+..+...+   .......... -.+++.+ .++..     ++...++.+.+++++|.+-
T Consensus        84 p~~~h~~~~~~al~~gk~-v~~EKP~a~~---~~~~~~l~~~a~~~g~~~~v~~~~-----r~~p~~~~~k~~i~~g~iG  154 (354)
T 3q2i_A           84 PSGLHPTQSIECSEAGFH-VMTEKPMATR---WEDGLEMVKAADKAKKHLFVVKQN-----RRNATLQLLKRAMQEKRFG  154 (354)
T ss_dssp             CGGGHHHHHHHHHHTTCE-EEECSSSCSS---HHHHHHHHHHHHHHTCCEEECCGG-----GGSHHHHHHHHHHHTTTTC
T ss_pred             CcHHHHHHHHHHHHCCCC-EEEeCCCcCC---HHHHHHHHHHHHHhCCeEEEEEcc-----cCCHHHHHHHHHHhcCCCC
Confidence            875 56667777776644 4444321100   0000001111 1122222 22222     3345688889999998774


Q ss_pred             ee
Q 042426          236 YV  237 (270)
Q Consensus       236 ~~  237 (270)
                      .+
T Consensus       155 ~i  156 (354)
T 3q2i_A          155 RI  156 (354)
T ss_dssp             SE
T ss_pred             ce
Confidence            43

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=96.58  E-value=0.0078  Score=48.16  Aligned_cols=99  Identities=15%  Similarity=0.163  Sum_probs=65.4

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC------CceeecCCchhHHHHHHhHcCCC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGF------DDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ..++.+||++|  +|.|..+..+++..+ .+|+++..+++-.+.+++.+..      +.-+..... +..+.+... .+.
T Consensus        76 ~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~-D~~~~l~~~-~~~  151 (283)
T 2i7c_A           76 SKEPKNVLVVG--GGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-DASKFLENV-TNT  151 (283)
T ss_dssp             SSSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES-CHHHHHHHC-CSC
T ss_pred             CCCCCeEEEEe--CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEEC-ChHHHHHhC-CCC
Confidence            34568999998  566777777777654 5999999999998988855532      111122222 444444332 347


Q ss_pred             ccEEEeCCC-----------cchHHHHHHccccCCEEEEEc
Q 042426          151 IDIYFENVG-----------GKMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       151 ~d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~g  180 (270)
                      ||+|+-...           ...++.+.+.|+++|.++...
T Consensus       152 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          152 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             EEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence            999875221           135678889999999998753

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.57  E-value=0.0023  Score=50.31  Aligned_cols=85  Identities=16%  Similarity=0.149  Sum_probs=57.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      .+ +++|+|+ |++|.+++..+...|+ +|++..|+.++.+.+.++++.   ....   +..+.+.+     +|+|++|+
T Consensus       108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~~---~~~~~~~~-----aDiVInat  174 (253)
T 3u62_A          108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSLD---QLDEVVKK-----AKSLFNTT  174 (253)
T ss_dssp             CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEGG---GHHHHHHT-----CSEEEECS
T ss_pred             CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCHH---HHHhhhcC-----CCEEEECC
Confidence            45 8999997 9999999999999998 999999998877665433331   2221   34333433     89999988


Q ss_pred             Ccc------hHHHHHHccccCCEEEEE
Q 042426          159 GGK------MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       159 g~~------~~~~~~~~l~~~G~~v~~  179 (270)
                      ...      .+  ....++++..++.+
T Consensus       175 p~gm~p~~~~i--~~~~l~~~~~V~Di  199 (253)
T 3u62_A          175 SVGMKGEELPV--SDDSLKNLSLVYDV  199 (253)
T ss_dssp             STTTTSCCCSC--CHHHHTTCSEEEEC
T ss_pred             CCCCCCCCCCC--CHHHhCcCCEEEEe
Confidence            531      12  12345666666655

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=96.57  E-value=0.2  Score=40.72  Aligned_cols=133  Identities=17%  Similarity=0.208  Sum_probs=77.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEE-EeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV-GCYVVG-SARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~-g~~v~~-~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +|.|+|. |.+|...+..+... ++++++ .++++++.+.+.+++|..    +.   ++.+.+.+   ..+|+|+.|+..
T Consensus         5 ~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~---~~~~~l~~---~~~D~V~i~tp~   73 (331)
T 4hkt_A            5 RFGLLGA-GRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VR---TIDAIEAA---ADIDAVVICTPT   73 (331)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----EC---CHHHHHHC---TTCCEEEECSCG
T ss_pred             EEEEECC-CHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cC---CHHHHhcC---CCCCEEEEeCCc
Confidence            6899997 99999888777665 678775 556677766666577764    22   45555542   248999999987


Q ss_pred             c-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHH-Hhhccee-eeccccCcccchHHHHHHHHHHHHCCcee
Q 042426          161 K-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQV-VGKRICM-EGFLAGDFYHQYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       161 ~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  235 (270)
                      . ..+.+..++..+-. |.+..+....   .......... -.+++.+ .++.     .++...++.+.+++++|.+-
T Consensus        74 ~~h~~~~~~al~~gk~-v~~EKP~~~~---~~~~~~l~~~a~~~g~~~~v~~~-----~r~~p~~~~~~~~i~~g~iG  142 (331)
T 4hkt_A           74 DTHADLIERFARAGKA-IFCEKPIDLD---AERVRACLKVVSDTKAKLMVGFN-----RRFDPHFMAVRKAIDDGRIG  142 (331)
T ss_dssp             GGHHHHHHHHHHTTCE-EEECSCSCSS---HHHHHHHHHHHHHTTCCEEECCG-----GGGCHHHHHHHHHHHTTTTC
T ss_pred             hhHHHHHHHHHHcCCc-EEEecCCCCC---HHHHHHHHHHHHHcCCeEEEccc-----ccCCHHHHHHHHHHHcCCCC
Confidence            5 66667777766644 4444321100   0000001111 1122222 2222     23346678888899998764

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.56  E-value=0.026  Score=45.02  Aligned_cols=90  Identities=21%  Similarity=0.263  Sum_probs=59.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh------------CCCce--------eecCCchhHHH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF------------GFDDA--------FNYKEEPDLDA  141 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~------------g~~~v--------i~~~~~~~~~~  141 (270)
                      .+|.|+|+ |.+|...++.+...|.+|++.++++++.+.+++..            +....        +....  ++.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~--~~~~   81 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSD--DLAQ   81 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEES--CHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeC--CHHH
Confidence            47999997 99999999999999999999999998877776331            22100        00111  2222


Q ss_pred             HHHhHcCCCccEEEeCCCcc------hHHHHHHccccCCEEEEE
Q 042426          142 ALNRCFPEGIDIYFENVGGK------MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       142 ~i~~~~~~~~d~v~d~~g~~------~~~~~~~~l~~~G~~v~~  179 (270)
                      .+     .++|+|++++...      .+......++++..++..
T Consensus        82 ~~-----~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~  120 (283)
T 4e12_A           82 AV-----KDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATN  120 (283)
T ss_dssp             HT-----TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred             Hh-----ccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEEC
Confidence            22     2489999999863      234445556666666543

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=96.56  E-value=0.0061  Score=48.16  Aligned_cols=106  Identities=14%  Similarity=0.096  Sum_probs=69.2

Q ss_pred             HhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHc
Q 042426           71 GLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        71 ~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      ++.....++++.+||-+|  +|.|..+..+++..+.+|++++.++...+.+++.   .|...-+..... ++.+ +. ..
T Consensus        37 ~l~~l~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~-~~-~~  111 (267)
T 3kkz_A           37 ALSFIDNLTEKSLIADIG--CGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVG-SMDD-LP-FR  111 (267)
T ss_dssp             HHTTCCCCCTTCEEEEET--CTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-CTTS-CC-CC
T ss_pred             HHHhcccCCCCCEEEEeC--CCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEc-Chhh-CC-CC
Confidence            443334578899999998  5678888999988566999999999988777633   233211111111 1110 00 11


Q ss_pred             CCCccEEEeCCCc------chHHHHHHccccCCEEEEEcc
Q 042426          148 PEGIDIYFENVGG------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       148 ~~~~d~v~d~~g~------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .+.||+|+....-      ..+..+.+.|+|+|+++....
T Consensus       112 ~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  151 (267)
T 3kkz_A          112 NEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC  151 (267)
T ss_dssp             TTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred             CCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence            2369999864431      267888899999999987653

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=96.54  E-value=0.01  Score=61.59  Aligned_cols=82  Identities=15%  Similarity=0.053  Sum_probs=58.6

Q ss_pred             CCCcEEEEecCCch-HHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHhCCC------ceeecCCchhHHHHHHhH
Q 042426           79 KKGEYVYVSAASGA-VGQLVGQFVKLVGCYVVGSARSKEK-----VDLLKHKFGFD------DAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        79 ~~g~~vlI~ga~g~-vG~~ai~la~~~g~~v~~~~~~~~~-----~~~~~~~~g~~------~vi~~~~~~~~~~~i~~~  146 (270)
                      -.|.++||+||++| +|.++++.+...|++|++++++.++     .+.+.++++..      ...|..+.++....+.+.
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            46789999999999 9999999999999999999987655     44444355431      123555553454444444


Q ss_pred             cC------CCccEEEeCCCc
Q 042426          147 FP------EGIDIYFENVGG  160 (270)
Q Consensus       147 ~~------~~~d~v~d~~g~  160 (270)
                      ..      |+.|++++++|.
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCC
T ss_pred             HhhhhhhcCCCCEEEECCCc
Confidence            33      478999999885

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=96.51  E-value=0.016  Score=46.46  Aligned_cols=63  Identities=6%  Similarity=0.086  Sum_probs=44.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +|||+||+|.+|..+++.+. .|.+|+++++++.       .    ...|..+..++.+.+...   ++|+||.+++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------~----~~~D~~d~~~~~~~~~~~---~~d~vih~a~~   64 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------E----FCGDFSNPKGVAETVRKL---RPDVIVNAAAH   64 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------S----SCCCTTCHHHHHHHHHHH---CCSEEEECCCC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------c----ccccCCCHHHHHHHHHhc---CCCEEEECccc
Confidence            69999999999999998888 7999999997641       1    123444432333333322   48999999873

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=96.51  E-value=0.0077  Score=48.83  Aligned_cols=73  Identities=19%  Similarity=0.238  Sum_probs=46.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHH---HHHHHHHhC-----CC-ceeecCCchhHHHHHHhHcCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEK---VDLLKHKFG-----FD-DAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~---~~~~~~~~g-----~~-~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      |.+|||+||+|.+|..+++.+...|.+|+++.+ ++++   .+.+. .+.     .. ...|..+..++.+.+.     +
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~   74 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLT-NLPGASEKLHFFNADLSNPDSFAAAIE-----G   74 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHH-TSTTHHHHEEECCCCTTCGGGGHHHHT-----T
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHH-hhhccCCceEEEecCCCCHHHHHHHHc-----C
Confidence            468999999999999999988888999999887 5432   22222 221     11 1124444423444443     3


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|+||.+++
T Consensus        75 ~d~vih~A~   83 (322)
T 2p4h_X           75 CVGIFHTAS   83 (322)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEEcCC
Confidence            899999885

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=96.50  E-value=0.12  Score=42.06  Aligned_cols=137  Identities=14%  Similarity=0.110  Sum_probs=78.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHc-CCEEEEE-eCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLV-GCYVVGS-ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~-~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      -+|.|+|. |.+|...+..++.. +++++++ ++++++.+.+.+++|...+++     ++.+.+.+   ..+|+|+.|+.
T Consensus         6 ~~igiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~-----~~~~ll~~---~~~D~V~i~tp   76 (330)
T 3e9m_A            6 IRYGIMST-AQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYG-----SYEELCKD---ETIDIIYIPTY   76 (330)
T ss_dssp             EEEEECSC-CTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBS-----SHHHHHHC---TTCSEEEECCC
T ss_pred             EEEEEECc-hHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeC-----CHHHHhcC---CCCCEEEEcCC
Confidence            37999997 99998887777664 6687755 456666666655777643321     55555542   25999999998


Q ss_pred             cc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHH-hhccee-eeccccCcccchHHHHHHHHHHHHCCceee
Q 042426          160 GK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVV-GKRICM-EGFLAGDFYHQYPKFLELVMLAIKEGKLVY  236 (270)
Q Consensus       160 ~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  236 (270)
                      .. ..+.+..++..+-. |.+..+...+   ........... .+++.+ .++     ..++...++.+.+++++|.+-.
T Consensus        77 ~~~h~~~~~~al~~gk~-vl~EKP~~~~---~~e~~~l~~~a~~~g~~~~v~~-----~~r~~p~~~~~k~~i~~g~iG~  147 (330)
T 3e9m_A           77 NQGHYSAAKLALSQGKP-VLLEKPFTLN---AAEAEELFAIAQEQGVFLMEAQ-----KSVFLPITQKVKATIQEGGLGE  147 (330)
T ss_dssp             GGGHHHHHHHHHHTTCC-EEECSSCCSS---HHHHHHHHHHHHHTTCCEEECC-----SGGGCHHHHHHHHHHHTTTTCS
T ss_pred             CHHHHHHHHHHHHCCCe-EEEeCCCCCC---HHHHHHHHHHHHHcCCeEEEEE-----hhhhCHHHHHHHHHHhCCCCCC
Confidence            75 66667777776654 4443321100   00000011111 122222 222     2233466788888898887643

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=96.50  E-value=0.2  Score=41.23  Aligned_cols=89  Identities=15%  Similarity=0.123  Sum_probs=59.7

Q ss_pred             cEEEEecCCchHHH-HHHHHHHHc-CCEEEEE-eCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           82 EYVYVSAASGAVGQ-LVGQFVKLV-GCYVVGS-ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        82 ~~vlI~ga~g~vG~-~ai~la~~~-g~~v~~~-~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      -+|.|+|. |.+|. ..+..++.. +++++++ ++++++.+.+.+++|....     . ++.+.+.+   ..+|+|+-|+
T Consensus        28 ~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-----~-~~~~ll~~---~~~D~V~i~t   97 (350)
T 3rc1_A           28 IRVGVIGC-ADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV-----E-GYPALLER---DDVDAVYVPL   97 (350)
T ss_dssp             EEEEEESC-CHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE-----E-SHHHHHTC---TTCSEEEECC
T ss_pred             eEEEEEcC-cHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc-----C-CHHHHhcC---CCCCEEEECC
Confidence            37999997 99998 566665555 7787755 5666777666657887532     1 55554432   2599999999


Q ss_pred             Ccc-hHHHHHHccccCCEEEEEcc
Q 042426          159 GGK-MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       159 g~~-~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ... ..+.+..++..+-. |.+..
T Consensus        98 p~~~h~~~~~~al~aGk~-Vl~EK  120 (350)
T 3rc1_A           98 PAVLHAEWIDRALRAGKH-VLAEK  120 (350)
T ss_dssp             CGGGHHHHHHHHHHTTCE-EEEES
T ss_pred             CcHHHHHHHHHHHHCCCc-EEEeC
Confidence            875 66677777776655 44544

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=96.49  E-value=0.011  Score=46.37  Aligned_cols=99  Identities=10%  Similarity=-0.016  Sum_probs=66.1

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHh-HcCCCcc
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNR-CFPEGID  152 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~-~~~~~~d  152 (270)
                      ..++.+||=.|  +|.|..++.++... +.+|++++.+++..+.+++   ++|..++ ..... +..+.... ...+.||
T Consensus        78 ~~~~~~vLDiG--~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v-~~~~~-d~~~~~~~~~~~~~fD  153 (249)
T 3g89_A           78 WQGPLRVLDLG--TGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGA-RALWG-RAEVLAREAGHREAYA  153 (249)
T ss_dssp             CCSSCEEEEET--CTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSE-EEEEC-CHHHHTTSTTTTTCEE
T ss_pred             cCCCCEEEEEc--CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCce-EEEEC-cHHHhhcccccCCCce
Confidence            35678999988  66777777888775 5699999999998877763   3465432 22222 33322211 1123699


Q ss_pred             EEEeCCCc---chHHHHHHccccCCEEEEEc
Q 042426          153 IYFENVGG---KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       153 ~v~d~~g~---~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +|+...-.   ..++.+.+.|+++|+++.+.
T Consensus       154 ~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~  184 (249)
T 3g89_A          154 RAVARAVAPLCVLSELLLPFLEVGGAAVAMK  184 (249)
T ss_dssp             EEEEESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             EEEECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            99875433   36677888999999998753

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=96.48  E-value=0.0065  Score=49.42  Aligned_cols=97  Identities=19%  Similarity=0.184  Sum_probs=63.7

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC------C-CceeecCCchhHHHHHHhHcCCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFG------F-DDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g------~-~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      .++.+||++|  +|.|..+..+++..+ .+|+++..+++-.+.+++.+.      . +.-+..... +..+.+.. ..+.
T Consensus        76 ~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~-D~~~~l~~-~~~~  151 (314)
T 1uir_A           76 PEPKRVLIVG--GGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVID-DARAYLER-TEER  151 (314)
T ss_dssp             SCCCEEEEEE--CTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES-CHHHHHHH-CCCC
T ss_pred             CCCCeEEEEc--CCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEc-hHHHHHHh-cCCC
Confidence            4567999999  566777788887654 599999999988888874432      1 111222222 44443333 2347


Q ss_pred             ccEEEeCCCc--------------chHHHHHHccccCCEEEEE
Q 042426          151 IDIYFENVGG--------------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       151 ~d~v~d~~g~--------------~~~~~~~~~l~~~G~~v~~  179 (270)
                      ||+|+-....              ..++.+.+.|+|+|.++..
T Consensus       152 fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  194 (314)
T 1uir_A          152 YDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (314)
T ss_dssp             EEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             ccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence            9998743321              2478889999999999865

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=96.47  E-value=0.006  Score=46.88  Aligned_cols=75  Identities=15%  Similarity=0.143  Sum_probs=51.8

Q ss_pred             CCcEEEEecC----------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHH
Q 042426           80 KGEYVYVSAA----------------SGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAAL  143 (270)
Q Consensus        80 ~g~~vlI~ga----------------~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i  143 (270)
                      .|.++||+||                +|++|.+.++.+...|++|+.+.+.. ..+.   ..|. .+++..+..++.+.+
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~-~l~~---~~g~-~~~dv~~~~~~~~~v   81 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV-SLPT---PPFV-KRVDVMTALEMEAAV   81 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC-CCCC---CTTE-EEEECCSHHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc-cccc---CCCC-eEEccCcHHHHHHHH
Confidence            4789999999                68999999999999999999987543 1110   1122 345555543455555


Q ss_pred             HhHcCCCccEEEeCCCc
Q 042426          144 NRCFPEGIDIYFENVGG  160 (270)
Q Consensus       144 ~~~~~~~~d~v~d~~g~  160 (270)
                      .+.. +++|+++.++|-
T Consensus        82 ~~~~-~~~Dili~~Aav   97 (226)
T 1u7z_A           82 NASV-QQQNIFIGCAAV   97 (226)
T ss_dssp             HHHG-GGCSEEEECCBC
T ss_pred             HHhc-CCCCEEEECCcc
Confidence            4433 358999999884

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=96.46  E-value=0.025  Score=47.41  Aligned_cols=97  Identities=13%  Similarity=0.166  Sum_probs=65.5

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCCccEE
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      +++|++||=.|  +++|..++.+++. |++|++++.++...+.+++.   .|...-+.  .. |..+.+... .+.||+|
T Consensus       212 ~~~g~~VLDlg--~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~~~~--~~-D~~~~l~~~-~~~fD~I  284 (393)
T 4dmg_A          212 VRPGERVLDVY--SYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRVDIR--HG-EALPTLRGL-EGPFHHV  284 (393)
T ss_dssp             CCTTCEEEEES--CTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCCEEE--ES-CHHHHHHTC-CCCEEEE
T ss_pred             hcCCCeEEEcc--cchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCCcEE--Ec-cHHHHHHHh-cCCCCEE
Confidence            45689998887  5667777777764 88899999999988877633   34432222  22 454444443 2349998


Q ss_pred             EeCCCc----------------chHHHHHHccccCCEEEEEcc
Q 042426          155 FENVGG----------------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       155 ~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +-....                ..+..+.++|+|+|.++.+..
T Consensus       285 i~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~  327 (393)
T 4dmg_A          285 LLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC  327 (393)
T ss_dssp             EECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence            753332                356778899999999987655

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=96.46  E-value=0.0029  Score=52.29  Aligned_cols=77  Identities=13%  Similarity=0.152  Sum_probs=47.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHh-CCCceeecCCchhHHHHHHhH-cCCCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKF-GFDDAFNYKEEPDLDAALNRC-FPEGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~-g~~~vi~~~~~~~~~~~i~~~-~~~~~d~v~d~  157 (270)
                      +.+|||+||+|.+|..+++.+...| .+|+++.++..... .. .+ +.....|..+. +..+.+.+. ..+++|+||.+
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~-~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~d~Vih~  122 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-NLVDLNIADYMDKE-DFLIQIMAGEEFGDVEAIFHE  122 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GG-GTTTSCCSEEEEHH-HHHHHHHTTCCCSSCCEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hh-cccCceEeeecCcH-HHHHHHHhhcccCCCCEEEEC
Confidence            4579999999999999999888889 89999997654321 11 11 11112233332 222222211 11269999999


Q ss_pred             CCc
Q 042426          158 VGG  160 (270)
Q Consensus       158 ~g~  160 (270)
                      ++.
T Consensus       123 A~~  125 (357)
T 2x6t_A          123 GAC  125 (357)
T ss_dssp             CSC
T ss_pred             Ccc
Confidence            873

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.46  E-value=0.0088  Score=47.64  Aligned_cols=89  Identities=10%  Similarity=0.199  Sum_probs=62.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      .+|||+|+ |.+|..+++.+...|.+|+++++++.+.+.+. ..+...+ .|..+. +         -.++|+||.+++.
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~-~---------~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEPLLWPGEEP-S---------LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEEEESSSSCC-C---------CTTCCEEEECCCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeEEEeccccc-c---------cCCCCEEEECCCc
Confidence            47999998 99999999999888999999999998887776 5554322 233322 1         2369999999974


Q ss_pred             c-----hHHHHHHcccc----CCEEEEEccc
Q 042426          161 K-----MLDAVLLNMRI----CGHIAVCGMI  182 (270)
Q Consensus       161 ~-----~~~~~~~~l~~----~G~~v~~g~~  182 (270)
                      .     .....++.++.    -.+++.++..
T Consensus        74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~  104 (286)
T 3ius_A           74 DSGGDPVLAALGDQIAARAAQFRWVGYLSTT  104 (286)
T ss_dssp             BTTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred             cccccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence            2     23444444433    2688877654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=96.44  E-value=0.0049  Score=50.48  Aligned_cols=72  Identities=11%  Similarity=0.121  Sum_probs=47.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchh-HHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPD-LDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~-~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +|||+||+|.+|..+++.+... |.+|++++++..+.+.+.+..+.. ...|..+..+ +.+.+.     ++|+||.+++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~d~vih~A~   76 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLVA   76 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-----HCSEEEECBC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-----CCCEEEEccc
Confidence            6999999999999999988887 899999998876544322111221 1124433112 333333     3899999887

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.44  E-value=0.012  Score=45.14  Aligned_cols=91  Identities=10%  Similarity=0.037  Sum_probs=59.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      .|.+|||.|+ |.+|...++.+...|++|++++.... ..+.+.++.+.. .+ .+.   +.+  .++  .++|+||-++
T Consensus        30 ~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~-~i-~~~---~~~--~dL--~~adLVIaAT   99 (223)
T 3dfz_A           30 KGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLR-VK-RKK---VGE--EDL--LNVFFIVVAT   99 (223)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCE-EE-CSC---CCG--GGS--SSCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcE-EE-ECC---CCH--hHh--CCCCEEEECC
Confidence            3578999998 99999999999999999999886432 344443122222 22 111   110  011  2599999999


Q ss_pred             CcchHHHHHHccccCCEEEEEc
Q 042426          159 GGKMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       159 g~~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +.+.++..+...+..|.+|..-
T Consensus       100 ~d~~~N~~I~~~ak~gi~VNvv  121 (223)
T 3dfz_A          100 NDQAVNKFVKQHIKNDQLVNMA  121 (223)
T ss_dssp             CCTHHHHHHHHHSCTTCEEEC-
T ss_pred             CCHHHHHHHHHHHhCCCEEEEe
Confidence            9887776666555578777653

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=96.43  E-value=0.0066  Score=49.12  Aligned_cols=98  Identities=11%  Similarity=0.137  Sum_probs=64.4

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC-----C-CceeecCCchhHHHHHHhHcCCC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFG-----F-DDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g-----~-~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ..++.+||++|  +|.|..+..+++..+ .+|+++..+++-.+.+++.+.     . +.-+..... +..+.+.. ..+.
T Consensus        93 ~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~-Da~~~l~~-~~~~  168 (304)
T 2o07_A           93 HPNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG-DGFEFMKQ-NQDA  168 (304)
T ss_dssp             SSSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES-CHHHHHHT-CSSC
T ss_pred             CCCCCEEEEEC--CCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC-cHHHHHhh-CCCC
Confidence            34568999999  566777888887654 599999999998888874332     1 111122122 44343433 2347


Q ss_pred             ccEEEe-CCC----------cchHHHHHHccccCCEEEEE
Q 042426          151 IDIYFE-NVG----------GKMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       151 ~d~v~d-~~g----------~~~~~~~~~~l~~~G~~v~~  179 (270)
                      ||+|+- ...          ...++.+.+.|+++|.++.-
T Consensus       169 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  208 (304)
T 2o07_A          169 FDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQ  208 (304)
T ss_dssp             EEEEEEECC-----------CHHHHHHHHHEEEEEEEEEE
T ss_pred             ceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEe
Confidence            999984 322          12578899999999999864

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=96.42  E-value=0.0091  Score=48.71  Aligned_cols=97  Identities=15%  Similarity=0.160  Sum_probs=64.5

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCC------CceeecCCchhHHHHHHhHcCCCc
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGF------DDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      .++.+||.+|  +|.|..+..+++.. +.+|+++..+++-.+.+++.+..      +.-+..... |..+.+.. ..+.|
T Consensus       115 ~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~-D~~~~l~~-~~~~f  190 (321)
T 2pt6_A          115 KEPKNVLVVG--GGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-DASKFLEN-VTNTY  190 (321)
T ss_dssp             SSCCEEEEEE--CTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES-CHHHHHHH-CCSCE
T ss_pred             CCCCEEEEEc--CCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEc-cHHHHHhh-cCCCc
Confidence            3567999998  55677777888765 46999999999999988854432      111222222 44443332 23479


Q ss_pred             cEEEeCCC-----------cchHHHHHHccccCCEEEEE
Q 042426          152 DIYFENVG-----------GKMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       152 d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~  179 (270)
                      |+|+-...           ...++.+.+.|+++|.++.-
T Consensus       191 DvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  229 (321)
T 2pt6_A          191 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ  229 (321)
T ss_dssp             EEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            99884321           23577888999999999874

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=96.42  E-value=0.015  Score=45.01  Aligned_cols=102  Identities=17%  Similarity=0.220  Sum_probs=66.3

Q ss_pred             hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCC
Q 042426           72 LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        72 l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      +.......++.+||-.|  +|.|..+..+++. |. ++++++.++...+.+++...... +..... ++.+ + ....+.
T Consensus        35 l~~~~~~~~~~~vLdiG--~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~-d~~~-~-~~~~~~  107 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLG--CGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTG-ITYERA-DLDK-L-HLPQDS  107 (243)
T ss_dssp             HHHHSCCCTTCEEEEET--CTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSS-EEEEEC-CGGG-C-CCCTTC
T ss_pred             HHHhccccCCCEEEEEc--CcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCC-ceEEEc-Chhh-c-cCCCCC
Confidence            44445556788999998  4557777777776 77 99999999999998884433221 111111 1111 0 011236


Q ss_pred             ccEEEeCCCc-------chHHHHHHccccCCEEEEEc
Q 042426          151 IDIYFENVGG-------KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       151 ~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g  180 (270)
                      ||+|+....-       ..+..+.+.|+|+|+++...
T Consensus       108 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          108 FDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence            9999875431       25788889999999998754

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=96.42  E-value=0.18  Score=41.29  Aligned_cols=135  Identities=14%  Similarity=0.296  Sum_probs=77.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEE-eCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV-GCYVVGS-ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~-g~~v~~~-~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +|.|+|. |.+|...+..+... +++++++ ++++++.+.+.+++|...+++     ++.+.+.+   ..+|+|+-|+..
T Consensus         4 rvgiIG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~-----~~~~ll~~---~~~D~V~i~tp~   74 (344)
T 3ezy_A            4 RIGVIGL-GRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYK-----DPHELIED---PNVDAVLVCSST   74 (344)
T ss_dssp             EEEEECC-SHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEES-----SHHHHHHC---TTCCEEEECSCG
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeC-----CHHHHhcC---CCCCEEEEcCCC
Confidence            6899997 99998877666544 6687755 566777776665788654432     45554442   249999999987


Q ss_pred             c-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHH-hhccee-eeccccCcccchHHHHHHHHHHHHCCcee
Q 042426          161 K-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVV-GKRICM-EGFLAGDFYHQYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       161 ~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  235 (270)
                      . ....+..++..+-.+ .+..+....   ........... .+++.+ .++..     ++...++.+.+++++|.+-
T Consensus        75 ~~h~~~~~~al~~gk~v-~~EKP~~~~---~~e~~~l~~~a~~~g~~~~v~~~~-----R~~p~~~~~k~~i~~G~iG  143 (344)
T 3ezy_A           75 NTHSELVIACAKAKKHV-FCEKPLSLN---LADVDRMIEETKKADVILFTGFNR-----RFDRNFKKLKEAVENGTIG  143 (344)
T ss_dssp             GGHHHHHHHHHHTTCEE-EEESCSCSC---HHHHHHHHHHHHHHTCCEEEECGG-----GGCHHHHHHHHHHHTTTTS
T ss_pred             cchHHHHHHHHhcCCeE-EEECCCCCC---HHHHHHHHHHHHHhCCcEEEeecc-----cCCHHHHHHHHHHHcCCCC
Confidence            5 566666777766554 443321100   00000011111 122222 22222     3346678888899988664

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=96.41  E-value=0.015  Score=47.88  Aligned_cols=89  Identities=20%  Similarity=0.198  Sum_probs=63.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|...++.++.+|++|++..++.++ +... ++|...+    .  ++.+.+.+     .|+|+-++.
T Consensus       167 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~~----~--~l~ell~~-----aDvV~l~~P  232 (347)
T 1mx3_A          167 RGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD-GVER-ALGLQRV----S--TLQDLLFH-----SDCVTLHCG  232 (347)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT-THHH-HHTCEEC----S--SHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcch-hhHh-hcCCeec----C--CHHHHHhc-----CCEEEEcCC
Confidence            4679999997 999999999999999999998876543 2233 5665321    1  34444443     789988775


Q ss_pred             cc-----hH-HHHHHccccCCEEEEEccc
Q 042426          160 GK-----ML-DAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       160 ~~-----~~-~~~~~~l~~~G~~v~~g~~  182 (270)
                      ..     .+ ...+..|+++..++.++..
T Consensus       233 ~t~~t~~li~~~~l~~mk~gailIN~arg  261 (347)
T 1mx3_A          233 LNEHNHHLINDFTVKQMRQGAFLVNTARG  261 (347)
T ss_dssp             CCTTCTTSBSHHHHTTSCTTEEEEECSCT
T ss_pred             CCHHHHHHhHHHHHhcCCCCCEEEECCCC
Confidence            31     22 5677888888888887763

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=96.41  E-value=0.15  Score=42.01  Aligned_cols=136  Identities=13%  Similarity=0.094  Sum_probs=79.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHc-CCEEEEE-eCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLV-GCYVVGS-ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~-~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      -+|.|+|. |.+|...+..++.. +++++++ ++++++.+.+.+++|...   +.   ++.+.+.+   ..+|+|+.|+.
T Consensus         6 ~~vgiiG~-G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~~---~~~~~l~~---~~~D~V~i~tp   75 (354)
T 3db2_A            6 VGVAAIGL-GRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---DA---TMEALLAR---EDVEMVIITVP   75 (354)
T ss_dssp             EEEEEECC-SHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---CS---SHHHHHHC---SSCCEEEECSC
T ss_pred             ceEEEEcc-CHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---cC---CHHHHhcC---CCCCEEEEeCC
Confidence            37999997 99999887777665 7787755 566777776665788653   22   45555432   25999999998


Q ss_pred             cc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHH-hhccee-eeccccCcccchHHHHHHHHHHHHCCceee
Q 042426          160 GK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVV-GKRICM-EGFLAGDFYHQYPKFLELVMLAIKEGKLVY  236 (270)
Q Consensus       160 ~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  236 (270)
                      .. ....+..++..+-. |.+..+...   ............ .+++.+ .++.     .++...++.+.+++++|.+-.
T Consensus        76 ~~~h~~~~~~al~~gk~-vl~EKP~~~---~~~~~~~l~~~a~~~~~~~~v~~~-----~R~~p~~~~~k~~i~~g~iG~  146 (354)
T 3db2_A           76 NDKHAEVIEQCARSGKH-IYVEKPISV---SLDHAQRIDQVIKETGVKFLCGHS-----SRRLGALRKMKEMIDTKEIGE  146 (354)
T ss_dssp             TTSHHHHHHHHHHTTCE-EEEESSSCS---SHHHHHHHHHHHHHHCCCEEEECG-----GGGSHHHHHHHHHHHTTTTCC
T ss_pred             hHHHHHHHHHHHHcCCE-EEEccCCCC---CHHHHHHHHHHHHHcCCeEEEeec-----hhcCHHHHHHHHHHhcCCCCC
Confidence            75 66677777776655 444332110   000000011111 122222 2222     233467788888999987744

>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*

Probab=96.41  E-value=0.042  Score=42.01  Aligned_cols=97  Identities=10%  Similarity=0.056  Sum_probs=66.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcC-CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFP-EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~-~~~d~v  154 (270)
                      ++.+||=+|  +|.|..++.+++.. +.+|+++..+++..+.+++.   .|..++ ..... +..+.+....+ +.+|.|
T Consensus        34 ~~~~vLDiG--cG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv-~~~~~-Da~~~l~~~~~~~~~d~v  109 (218)
T 3dxy_A           34 EAPVTLEIG--FGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNL-RVMCH-DAVEVLHKMIPDNSLRMV  109 (218)
T ss_dssp             CCCEEEEES--CTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSE-EEECS-CHHHHHHHHSCTTCEEEE
T ss_pred             CCCeEEEEe--eeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcE-EEEEC-CHHHHHHHHcCCCChheE
Confidence            567888887  78888899999876 56999999999877776533   455432 23222 44444443333 368888


Q ss_pred             EeCCCc---------------chHHHHHHccccCCEEEEEc
Q 042426          155 FENVGG---------------KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       155 ~d~~g~---------------~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +-....               ..+..+.+.|+|+|.++...
T Consensus       110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t  150 (218)
T 3dxy_A          110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT  150 (218)
T ss_dssp             EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence            754221               25778889999999988753

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=96.41  E-value=0.0071  Score=50.14  Aligned_cols=74  Identities=14%  Similarity=0.200  Sum_probs=44.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHh-------CCC---ceeecCCchhHHHHHHhHcCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV--DLLKHKF-------GFD---DAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~--~~~~~~~-------g~~---~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      .+|||+||+|.+|..+++.+...|.+|++++++..+.  +.+. .+       +..   ...|..+..++.+.+...   
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVD-HIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHH-HHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            4799999999999999998888899999999876531  2222 11       111   112444432333333332   


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|+||.+++
T Consensus        78 ~~d~vih~A~   87 (372)
T 1db3_A           78 QPDEVYNLGA   87 (372)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCc
Confidence            4899999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	270
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	2e-34
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	1e-32
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	3e-20
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-18
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-18
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	4e-18
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	2e-17
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	3e-17
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	3e-16
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	3e-16
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	3e-15
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	5e-15
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	1e-14
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	3e-14
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	1e-13
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-12
d1vj1a1	166	b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin	1e-10
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	1e-09
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-09
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	3e-09
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	5e-09
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	9e-09
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	2e-08
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	3e-08
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	6e-08
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	2e-07
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	3e-06
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	6e-06

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  120 bits (302), Expect = 2e-34
 Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 6/186 (3%)

Query: 54  LPYYTGILGMPGLTAYGGLHELCSPKKG--EYVYVSAASGAVGQLVGQFVKLVGCYVVGS 111
           L Y+ G +GMPGLT+  G+ E      G  + + VS A+GA G L GQ   L+GC  V  
Sbjct: 2   LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVG 61

Query: 112 ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMR 171
               ++  L        DA    +  ++   L    P G+D+YF+NVGG + + V+  M 
Sbjct: 62  ICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMN 121

Query: 172 ICGHIAVCGMISQYNIE----KPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVML 227
              HI +CG ISQYN +     P           + I  E F   ++  ++   +  +  
Sbjct: 122 ENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQ 181

Query: 228 AIKEGK 233
             KEGK
Sbjct: 182 WFKEGK 187

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score =  116 bits (290), Expect = 1e-32
 Identities = 81/183 (44%), Positives = 107/183 (58%), Gaps = 3/183 (1%)

Query: 52  VPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGS 111
           +PL    G +GMPGLTAY GL E+C  K GE V VSAA+GAVG +VGQ  KL GC VVG+
Sbjct: 1   LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA 60

Query: 112 ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMR 171
           A S EK+  LK        FNYK    L+ AL +  P+G D YF+NVGG+ L+ VL  M+
Sbjct: 61  AGSDEKIAYLKQIGFDAA-FNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMK 119

Query: 172 ICGHIAVCGMISQYNIE-KPEGVHNLMQVVGKRICMEGFLAGDFY-HQYPKFLELVMLAI 229
             G IA+CG IS YN   +     +   ++ K++ +EGF+   +      K L  +M  +
Sbjct: 120 DFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWV 179

Query: 230 KEG 232
            EG
Sbjct: 180 LEG 182

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 83.9 bits (206), Expect = 3e-20
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 18/186 (9%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYV-SAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
           + +  LTAY  L        G+  ++ +  + AVG+   Q  KL+    +   R +  +D
Sbjct: 9   ISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD 68

Query: 120 LL---KHKFGFDDAFNYKEE-----PDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMR 171
            +     + G        +              +       +    VGGK    +   + 
Sbjct: 69  EVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLN 128

Query: 172 ICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKF----LELVML 227
             G +   G +S   +            + K     GF   +      +     L  ++ 
Sbjct: 129 NNGLMLTYGGMSFQPVT-----IPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIA 183

Query: 228 AIKEGK 233
             +EGK
Sbjct: 184 WYEEGK 189

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 78.5 bits (192), Expect = 2e-18
 Identities = 31/177 (17%), Positives = 54/177 (30%), Gaps = 11/177 (6%)

Query: 60  ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
           +LG    T YG        + G    V    G    ++          ++G   +K+K  
Sbjct: 8   LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFA 67

Query: 120 LLKHKFGFDDAFNYKEEP-DLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAV 178
             K +FG  +  N ++    +   L      G+D  FE +G   +    L     G    
Sbjct: 68  RAK-EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVS 126

Query: 179 CGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQ--YPKFLELVMLAIKEGK 233
             ++      +         V G+    +G   G +      PK +   M      K
Sbjct: 127 V-VVGVAASGEEIATRPFQLVTGRTW--KGTAFGGWKSVESVPKLVSEYM----SKK 176

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 78.1 bits (191), Expect = 3e-18
 Identities = 25/176 (14%), Positives = 52/176 (29%), Gaps = 9/176 (5%)

Query: 60  ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
           ++G    T YG   ++    +G    V    G    ++          ++G   +K+K  
Sbjct: 8   LIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFA 67

Query: 120 LLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVC 179
             K     +       +  +   L      G+D  FE +G        L+     +    
Sbjct: 68  KAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSV 127

Query: 180 GMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQ--YPKFLELVMLAIKEGK 233
            +         + +     ++      +G + G F  +   PK +   M      K
Sbjct: 128 IV---GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFM----AKK 176

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 77.4 bits (189), Expect = 4e-18
 Identities = 28/177 (15%), Positives = 53/177 (29%), Gaps = 12/177 (6%)

Query: 60  ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
           +LG    T +G        + G    V          V          ++    + +K +
Sbjct: 8   LLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFE 67

Query: 120 LLKHKFGFDDAFNYKEEPDL-DAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAV 178
             K  FG  D  N  +  +     L++    G+D   E VG   +    L   + G    
Sbjct: 68  KAK-VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVS 126

Query: 179 CGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQ--YPKFLELVMLAIKEGK 233
             +      +       L+         +G + G F  +   PK ++  +    + K
Sbjct: 127 VLVGWTDLHDVATRPIQLI----AGRTWKGSMFGGFKGKDGVPKMVKAYL----DKK 175

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 75.8 bits (185), Expect = 2e-17
 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 11/151 (7%)

Query: 62  GMPGLTAYGGLHELCS---PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV 118
           G  G TA   +H L       +   V V+ A+G VG +    +   G  VV S  ++E  
Sbjct: 2   GTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA 61

Query: 119 DLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAV 178
           D L  + G  +  + ++  D          +      + VGGK L ++L  ++  G +AV
Sbjct: 62  DYL-KQLGASEVISREDVYDGTL--KALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAV 118

Query: 179 CGMISQYNIEKPEGVHNLMQVVGKRICMEGF 209
            G+     +        +   + + + + G 
Sbjct: 119 SGLTGGGEVPAT-----VYPFILRGVSLLGI 144

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 75.1 bits (183), Expect = 3e-17
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 10/178 (5%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
            G+  LTA+  L E+     GE V + +A+G VG       K +    + +    +    
Sbjct: 6   FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK-MIGARIYTTAGSDAKRE 64

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           +  + G +   + +     D  L      G+D+   ++ G+ +   +  +   G     G
Sbjct: 65  MLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELG 124

Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYP----KFLELVMLAIKEGKL 234
               Y           +  + K                P    + L+ ++  + +GKL
Sbjct: 125 KKDVYADASLG-----LAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKL 177

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 72.6 bits (177), Expect = 3e-16
 Identities = 38/185 (20%), Positives = 63/185 (34%), Gaps = 14/185 (7%)

Query: 52  VPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGS 111
           VP+    G LG    T  G                  A GAVG       K+ G  ++ +
Sbjct: 1   VPIEL-LGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIA 58

Query: 112 ARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNM 170
               E    L  + G     N K + D  AA+      G++   E+ G   +L   +  +
Sbjct: 59  VDIVESRLELAKQLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDAL 117

Query: 171 RICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQ--YPKFLELVMLA 228
            I G IAV G        +     ++  ++     + G + G    +   P+ + L    
Sbjct: 118 GILGKIAVVGAPQLGTTAQ----FDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQ-- 171

Query: 229 IKEGK 233
             +GK
Sbjct: 172 --QGK 174

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 72.4 bits (176), Expect = 3e-16
 Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 4/173 (2%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
             + GLT Y  L +    K  E     AA+G VG +  Q+ K +G  ++G+  + +K   
Sbjct: 9   SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ- 67

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
              K G     NY+EE  ++        + + + +++VG    +  L  ++  G +   G
Sbjct: 68  SALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG 127

Query: 181 MISQYNIEKPEGVHNLM-QVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEG 232
             S        G+ N    +   R  ++G++      +  +    +   I  G
Sbjct: 128 NSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTR--EELTEASNELFSLIASG 178

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 69.9 bits (170), Expect = 3e-15
 Identities = 33/164 (20%), Positives = 60/164 (36%), Gaps = 16/164 (9%)

Query: 60  ILGMPGLTAYGGLHELCS---PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE 116
           I+G  G TA   +  L       +   + V+ ASG VG      +  +G  VV  +  + 
Sbjct: 8   IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67

Query: 117 KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHI 176
             +    K         ++E      L +   +      + VG K+L  VL  M   G +
Sbjct: 68  THE--YLKSLGASRVLPRDEFAESRPLEK---QVWAGAIDTVGDKVLAKVLAQMNYGGCV 122

Query: 177 AVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPK 220
           A CG+   + +        +M  + + + ++G    D     P+
Sbjct: 123 AACGLAGGFTLP-----TTVMPFILRNVRLQGV---DSVMTPPE 158

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 69.2 bits (168), Expect = 5e-15
 Identities = 34/170 (20%), Positives = 54/170 (31%), Gaps = 9/170 (5%)

Query: 60  ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
           +    G TAY    E      G+ V +  A G +G       + +G   V          
Sbjct: 8   MAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL 66

Query: 120 LLKHKFGFDDAFNYKE---EPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGH 175
            L  + G D   N +E   E    A ++     G D   E  G  + L      +R  G 
Sbjct: 67  KLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGF 126

Query: 176 IAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELV 225
            +V G+      + P        +V K    +G    D    + K + + 
Sbjct: 127 YSVAGVAVP---QDPVPFKVYEWLVLKNATFKGIWVSD-TSHFVKTVSIT 172

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (165), Expect = 1e-14
 Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 9/173 (5%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           +G+P  TAY  L      K GE V V  ASG VG    Q  +  G  ++G+A ++E    
Sbjct: 9   IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK- 67

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           +  + G  + FN++E   +D        +GIDI  E +    L   L  +   G + V G
Sbjct: 68  IVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 127

Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFY-HQYPKFLELVMLAIKEG 232
                 I       N    + K   + G         ++ ++   +   ++ G
Sbjct: 128 SRGTIEI-------NPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIG 173

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 67.2 bits (163), Expect = 3e-14
 Identities = 37/169 (21%), Positives = 59/169 (34%), Gaps = 17/169 (10%)

Query: 60  ILGMPGLTAYGGLHEL---CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE 116
            +G  G TA   +H L       +   V V+ A+G VG L    +   G  V  S     
Sbjct: 8   AIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAA 67

Query: 117 KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHI 176
           + D L+             E  +   +     +      + VGG+ L  VL  MR  G +
Sbjct: 68  EHDYLRV---LGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAV 124

Query: 177 AVCGMISQYNIEKP-----------EGVHNLMQVVGKRICMEGFLAGDF 214
           AV G+     +               G+ ++   +  R+ +   LAGD 
Sbjct: 125 AVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDL 173

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 65.4 bits (158), Expect = 1e-13
 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 14/174 (8%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           L   G+TAY  + +                G +G +  Q +K++    V +   KE+   
Sbjct: 12  LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNM-RICGHIAVC 179
           L  + G D   + + +P +   +      G+++  + VG +        +    G + + 
Sbjct: 72  LAERLGADHVVDARRDP-VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIV 130

Query: 180 GMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGK 233
           G   +            ++V+   +  EG L G+ Y +  + + L      +GK
Sbjct: 131 GYGGELR-------FPTIRVISSEVSFEGSLVGN-YVELHELVTLA----LQGK 172

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 62.6 bits (151), Expect = 1e-12
 Identities = 30/178 (16%), Positives = 58/178 (32%), Gaps = 14/178 (7%)

Query: 60  ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
           ++G    T YG          G    V    G VG       K  G   +    + +   
Sbjct: 7   LIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF 65

Query: 120 LLKHKFGFDDAFNYKEEPDLDAALNR-CFPEGIDIYFENVGGK--MLDAVLLNMRICGHI 176
               + G  +  N K+       +       G+D   E  G    M++A+       G  
Sbjct: 66  PKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVT 125

Query: 177 AVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQ-YPKFLELVMLAIKEGK 233
            V G+    +  +   +  L+ + G+ +  +G + G F  +   + ++  M    + K
Sbjct: 126 VVLGL---ASPNERLPLDPLLLLTGRSL--KGSVFGGFKGEEVSRLVDDYM----KKK 174

>d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.3 bits (135), Expect = 1e-10
 Identities = 18/92 (19%), Positives = 26/92 (28%), Gaps = 2/92 (2%)

Query: 1   MQPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPL--PYYT 58
            Q   G G+  V +S H    K D V       +   I     L K+    V       T
Sbjct: 73  AQVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGLKVKET 132

Query: 59  GILGMPGLTAYGGLHELCSPKKGEYVYVSAAS 90
              G+  +               + V +S  S
Sbjct: 133 VAKGLENMGVAFQSMMTGGNVGKQIVCISEDS 164

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 54.2 bits (129), Expect = 1e-09
 Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 15/166 (9%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           L   G+T Y  L        G+ V V    G +G +  +    +G +VV    S+ K + 
Sbjct: 12  LLCAGITTYSPLRH-WQAGPGKKVGVVGIGG-LGHMGIKLAHAMGAHVVAFTTSEAKRE- 68

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNM-RICGHIAVC 179
                G D+  N +   ++ A L     +  D     V           + +  G + + 
Sbjct: 69  AAKALGADEVVNSRNADEMAAHL-----KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLV 123

Query: 180 GMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELV 225
           G  +      P     +  ++ KR  + G + G    +  + L+  
Sbjct: 124 GAPA-----TPHKSPEVFNLIMKRRAIAGSMIGG-IPETQEMLDFC 163

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 2e-09
 Identities = 29/172 (16%), Positives = 53/172 (30%), Gaps = 11/172 (6%)

Query: 60  ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
           ++G    T YG   +    K G    V    G VG  V    K  G   +      +   
Sbjct: 9   LIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF 67

Query: 120 LLKHKFGFDDAFNYKEEPDLDAALNR-CFPEGIDIYFENVGGK--MLDAVLLNMRICGHI 176
                 G  +  + K+     + +        +   FE +G    M+DA+       G  
Sbjct: 68  EKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTS 127

Query: 177 AVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQ--YPKFLELVM 226
            V G+     +        ++   G+    +G + G    +   PK +   +
Sbjct: 128 VVVGVPPSAKMLTY---DPMLLFTGRTW--KGCVFGGLKSRDDVPKLVTEFL 174

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 50.3 bits (120), Expect = 3e-09
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 60  ILGMPGLTAYGGLHEL---CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE 116
           I+G  G TA   +  L       +   + V+ ASG VG      +  +G  VV  +  + 
Sbjct: 8   IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67

Query: 117 KVDLLK 122
             + LK
Sbjct: 68  THEYLK 73

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 51.9 bits (124), Expect = 5e-09
 Identities = 11/89 (12%), Positives = 29/89 (32%), Gaps = 5/89 (5%)

Query: 2   QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQ--SPQLLIKILDTSVPLPYYTG 59
             + G  V++V++S +  +    +V   + W    +      + L+          +   
Sbjct: 61  AVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKKIQYHEHV 120

Query: 60  ILGMPGLT-AYGGLHELCSPKKGEYVYVS 87
             G   +  A+  +        G+ V  +
Sbjct: 121 TKGFENMPAAFIEMLNG--ANLGKAVVTA 147

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 51.5 bits (122), Expect = 9e-09
 Identities = 23/178 (12%), Positives = 44/178 (24%), Gaps = 15/178 (8%)

Query: 60  ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
           ++G    + YG          G    V          +          ++    + EK  
Sbjct: 8   LIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFP 67

Query: 120 LLKHKFGFDDAFNYKEEPDLDAALNRC-FPEGIDIYFENV-GGKMLDAVLLNMRICGHIA 177
             K   G  D  N +E       +       G+D   +     + L A +    +     
Sbjct: 68  KAK-ALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSC 126

Query: 178 VCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQ--YPKFLELVMLAIKEGK 233
                    +  P     +  ++G+ I   G   G +      P  +          K
Sbjct: 127 TVVGAKVDEMTIP----TVDVILGRSI--NGTFFGGWKSVDSVPNLVSDYK----NKK 174

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.4 bits (119), Expect = 2e-08
 Identities = 32/174 (18%), Positives = 56/174 (32%), Gaps = 15/174 (8%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           L   GLT Y  L        G+ V +    G +G +     K +G      +RS  K + 
Sbjct: 9   LLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE- 65

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
              K G D      EE D        F   +     ++     + +   M++ G I    
Sbjct: 66  DAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCA-SSLTDIDFNIMPKAMKVGGRIVSIS 124

Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKL 234
           +  Q+       + +L     K + +     G       K L  ++  + E  +
Sbjct: 125 IPEQHE------MLSLKPYGLKAVSISYSALGS-----IKELNQLLKLVSEKDI 167

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 50.6 bits (120), Expect = 3e-08
 Identities = 33/163 (20%), Positives = 51/163 (31%), Gaps = 21/163 (12%)

Query: 60  ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVD 119
            L     T Y G         G  VYV+ A G VG       +L+G  VV          
Sbjct: 6   CLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL 63

Query: 120 LLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG----------------KML 163
                 GF+ A    + P  +          +D   + VG                  +L
Sbjct: 64  AHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVL 123

Query: 164 DAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICM 206
           ++++   R+ G I + G+   Y  E P  V    ++    I  
Sbjct: 124 NSLMQVTRVAGKIGIPGL---YVTEDPGAVDAAAKIGSLSIRF 163

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 49.0 bits (115), Expect = 6e-08
 Identities = 28/173 (16%), Positives = 54/173 (31%), Gaps = 11/173 (6%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           L   G+T Y  + +  S    + + V  A G +G +  Q  K V    +     +E+   
Sbjct: 9   LTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE 67

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
              + G D   N   +  L         +G+D   +    +   +V             G
Sbjct: 68  AAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-----G 122

Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGK 233
                 +   +  ++   +    I   G L G+    +   + L     + GK
Sbjct: 123 KYVMVGLFGADLHYHAPLITLSEIQFVGSLVGN-QSDFLGIMRL----AEAGK 170

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 47.8 bits (112), Expect = 2e-07
 Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 13/165 (7%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
             +  LTAY  L      + GE V V AA+GA+G    Q  + +G  V+ +A   EK+ L
Sbjct: 9   FPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL 67

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
                  + A   +          R    G       V GK ++  L  +   G +   G
Sbjct: 68  PLALGAEEAATYAEVP-------ERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIG 120

Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELV 225
                           ++++ + + + GF       +     E +
Sbjct: 121 AAEGEVAP-----IPPLRLMRRNLAVLGFWLTPLLREGALVEEAL 160

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 44.3 bits (103), Expect = 3e-06
 Identities = 35/174 (20%), Positives = 58/174 (33%), Gaps = 15/174 (8%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           +   G+T Y  L      K GE+V +    G +G +  Q+ K +G  VV      EK++ 
Sbjct: 9   IFCAGVTTYKALKV-TGAKPGEWVAIYGIGG-LGHVAVQYAKAMGLNVVAVDIGDEKLE- 65

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
           L  + G D   N  +E                     V      +   ++R  G   + G
Sbjct: 66  LAKELGADLVVNPLKEDAAKFM-KEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVG 124

Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKL 234
           +         E    +   V   I + G + G       + L+       EGK+
Sbjct: 125 LP------PEEMPIPIFDTVLNGIKIIGSIVGT-RKDLQEALQF----AAEGKV 167

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 43.1 bits (100), Expect = 6e-06
 Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 11/165 (6%)

Query: 61  LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
           +   G+T Y GL +  + + G++V +S   G +G +  Q+ + +G +V        K++ 
Sbjct: 9   ILCAGVTVYKGLKQ-TNARPGQWVAISGIGG-LGHVAVQYARAMGLHVAAIDIDDAKLE- 65

Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
              +           + D   A+ R       +    V        +   R  G IA+ G
Sbjct: 66  -LARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVG 124

Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELV 225
           +              +  VV K + + G + G       + L+  
Sbjct: 125 LPPGDFP------TPIFDVVLKGLHIAGSIVGT-RADLQEALDFA 162

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	270
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	100.0
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.98
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.97
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.97
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.97
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.97
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.96
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.96
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.95
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.95
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.95
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.95
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.95
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.94
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.94
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.94
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.94
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.94
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.94
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.94
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.93
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.93
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.93
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.92
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.91
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.65
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.62
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.57
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.55
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.47
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.44
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.44
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.39
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.35
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.32
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.32
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.32
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.32
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.27
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.19
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.15
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.14
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.13
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.13
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.12
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.11
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	98.95
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	98.87
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	98.73
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	98.69
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.58
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	98.56
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.55
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	98.48
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.44
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.41
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.4
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.39
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.34
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.34
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.33
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.33
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.31
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.3
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.3
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.29
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.29
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.28
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	98.27
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.23
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.23
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	98.23
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.22
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.21
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	98.2
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	98.19
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.17
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	98.15
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.14
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	98.13
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	98.13
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.12
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	98.09
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	98.08
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.08
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	98.07
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	98.05
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	98.05
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	98.04
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	98.03
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	98.03
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.02
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	98.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.0
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.98
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.98
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	97.97
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.97
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.96
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.93
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.91
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.91
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.91
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.9
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.88
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.87
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.85
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.85
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.84
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.82
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.81
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.8
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.79
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.79
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.79
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.77
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.73
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.7
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.67
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.66
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.65
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.6
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.59
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.53
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.52
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	97.5
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.49
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.4
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.39
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.37
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.37
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.36
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	97.35
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.34
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	97.33
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	97.33
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	97.29
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.29
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	97.24
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.24
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	97.23
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.2
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.19
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.19
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.16
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	97.14
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.11
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.1
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	97.05
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.05
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	97.04
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.03
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.99
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	96.93
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.93
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.92
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	96.91
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	96.8
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.8
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.77
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.74
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	96.71
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.7
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	96.68
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.67
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.61
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.6
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.57
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.53
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.5
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.48
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	96.45
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	96.44
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.4
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	96.39
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.39
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.38
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.37
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	96.35
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.28
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	96.27
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	96.26
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.23
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.22
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	96.21
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	96.2
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.19
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	96.13
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	96.05
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	96.01
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	95.99
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	95.98
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	95.97
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.96
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.94
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	95.89
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.86
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.85
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.85
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	95.83
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.81
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	95.72
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	95.68
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	95.68
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	95.65
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.59
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	95.56
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.54
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.52
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.52
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.5
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.47
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	95.45
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.42
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.36
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.28
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	95.22
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.21
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	95.17
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.16
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	95.1
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	95.1
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	95.04
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.02
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.01
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.98
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.9
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	94.89
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	94.85
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	94.83
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.8
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.8
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	94.74
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.68
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	94.67
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	94.67
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	94.66
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	94.64
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	94.64
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.64
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	94.63
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	94.56
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	94.55
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.43
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.35
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.34
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.22
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	94.2
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.19
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.05
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	94.02
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	94.01
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.91
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.9
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	93.89
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	93.82
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	93.82
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	93.75
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	93.71
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	93.69
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.67
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	93.64
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.63
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.61
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	93.55
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.53
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.33
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.32
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.32
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	93.25
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	93.24
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	93.23
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.21
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.21
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.19
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.08
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.04
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	93.02
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	92.94
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.9
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.86
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.85
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	92.84
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.83
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.63
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	92.62
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.57
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.57
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.47
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	92.45
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	92.36
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	92.25
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.19
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	92.07
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	92.04
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.87
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	91.83
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.8
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	91.77
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	91.66
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.63
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	91.47
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	91.41
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	91.38
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.33
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	91.26
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	91.24
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.14
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	91.01
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	91.01
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	90.92
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	90.92
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	90.91
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	90.87
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.61
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	90.57
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	90.33
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	90.29
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	90.26
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.22
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	90.2
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.11
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.1
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	90.09
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	89.87
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	89.84
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	89.75
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.5
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	89.45
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	89.43
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	89.35
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.35
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	89.32
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	89.27
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	88.98
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	88.8
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	88.74
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	88.69
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.65
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	88.63
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.6
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	88.54
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	88.45
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	88.35
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	88.02
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	87.89
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	87.66
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	87.56
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	87.55
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	87.53
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.38
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	87.29
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	87.29
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	87.22
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	86.95
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	86.9
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	86.82
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	86.81
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	86.72
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	86.59
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.11
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	86.09
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	86.04
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	85.93
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	85.87
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	85.76
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	85.62
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	85.47
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	85.25
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.21
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	85.17
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	84.94
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	84.78
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	84.73
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	84.68
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	84.61
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	84.28
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	83.97
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	83.81
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	83.8
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	83.57
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	83.41
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	82.99
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	82.77
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	82.55
d1zn7a1	178	Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]	82.47
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.44
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.27
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	82.21
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	82.03
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	82.01
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	81.84
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	81.56
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.44
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	81.36
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	80.97
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	80.78
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.74
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	80.65

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.2e-32  Score=208.28  Aligned_cols=175  Identities=19%  Similarity=0.286  Sum_probs=153.0

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCc
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEE  136 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~  136 (270)
                      |||+++++++|||+++++.+++++|++|||+||+|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++++++
T Consensus         2 eAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~-~~Ga~~vi~~~~~   80 (183)
T d1pqwa_           2 EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLGVEYVGDSRSV   80 (183)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTCCSEEEETTCS
T ss_pred             chhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccc-cccccccccCCcc
Confidence            589999999999999999999999999999999999999999999999999999999999999999 9999999999998


Q ss_pred             hhHHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc-
Q 042426          137 PDLDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF-  214 (270)
Q Consensus       137 ~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  214 (270)
                       ++.+.+++.+++ ++|++|||+|++.++.++++|+++|+++.+|..+...     ........+.+++++.++..... 
T Consensus        81 -~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  154 (183)
T d1pqwa_          81 -DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA-----DASLGLAALAKSASFSVVDLDLNL  154 (183)
T ss_dssp             -THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT-----TCEEEGGGGTTTCEEEECCHHHHH
T ss_pred             -CHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCC-----CcccchHHHhCCcEEEEEEcccee
Confidence             999999999987 9999999999999999999999999999999765421     11223344568888888876544 


Q ss_pred             ---ccchHHHHHHHHHHHHCCceeeee
Q 042426          215 ---YHQYPKFLELVMLAIKEGKLVYVE  238 (270)
Q Consensus       215 ---~~~~~~~~~~~~~~~~~g~~~~~~  238 (270)
                         +...++.++++.+++++|+++|++
T Consensus       155 ~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         155 KLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence               344567899999999999999854

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.98  E-value=2.4e-31  Score=200.56  Aligned_cols=177  Identities=45%  Similarity=0.670  Sum_probs=151.8

Q ss_pred             ccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           54 LPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      ++...+++.++++|||++|.+.+++++||+|||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++
T Consensus         3 ~~~~l~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-~~Ga~~vi~~   81 (182)
T d1v3va2           3 LSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNY   81 (182)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEET
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-hhhhhhhccc
Confidence            443357888999999999999999999999999999999999999999999999999999999999999 9999999999


Q ss_pred             CCchhHHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEccccccccc-CCCCccchHHHHhhcceeeeccc
Q 042426          134 KEEPDLDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIE-KPEGVHNLMQVVGKRICMEGFLA  211 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  211 (270)
                      +++ ++.+.+.+.+.+ ++|+||||+|++.++.++++++++|+++.+|..+.+... ......+...++.+++++.|++.
T Consensus        82 ~~~-~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~  160 (182)
T d1v3va2          82 KTV-NSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIV  160 (182)
T ss_dssp             TSC-SCHHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCG
T ss_pred             ccc-cHHHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEE
Confidence            887 777777666555 999999999999999999999999999999976654322 22334667788999999999988


Q ss_pred             cCc-ccchHHHHHHHHHHHHCC
Q 042426          212 GDF-YHQYPKFLELVMLAIKEG  232 (270)
Q Consensus       212 ~~~-~~~~~~~~~~~~~~~~~g  232 (270)
                      .++ .+...+.++++.+++++|
T Consensus       161 ~~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         161 YRWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHTT
T ss_pred             eccChHHHHHHHHHHHHHHhCc
Confidence            776 344567789999999876

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-31  Score=199.90  Aligned_cols=165  Identities=24%  Similarity=0.295  Sum_probs=143.9

Q ss_pred             cc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      ++ ++|+++++++|||+++.+.+++++|++|||+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++|+
T Consensus         2 s~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~vi~~   80 (174)
T d1yb5a2           2 DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNH   80 (174)
T ss_dssp             CHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEET
T ss_pred             CHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccccccccccccc-ccCccccccc
Confidence            45 489999999999999988899999999999999999999999999999999999999999999999 9999999999


Q ss_pred             CCchhHHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecccc
Q 042426          134 KEEPDLDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAG  212 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (270)
                      ++. ++.+.+++.+++ ++|+++||+|++.++.++++++++|+++.+|..+       ....+...++.+++++.|+.+.
T Consensus        81 ~~~-~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~-------~~~~~~~~~~~k~~~i~g~~~~  152 (174)
T d1yb5a2          81 REV-NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG-------TIEINPRDTMAKESSIIGVTLF  152 (174)
T ss_dssp             TST-THHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCS-------CEEECTHHHHTTTCEEEECCGG
T ss_pred             ccc-cHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCC-------CCCCCHHHHHHCCCEEEEEEec
Confidence            988 999999998887 9999999999999999999999999999998743       2346677888999999998765


Q ss_pred             CcccchHHHHHHHHHHHHC
Q 042426          213 DFYHQYPKFLELVMLAIKE  231 (270)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~  231 (270)
                      +.   ..+.++++.+++++
T Consensus       153 ~~---~~~~~~~~~~~l~~  168 (174)
T d1yb5a2         153 SS---TKEEFQQYAAALQA  168 (174)
T ss_dssp             GC---CHHHHHHHHHHHHH
T ss_pred             CC---CHHHHHHHHHHHHH
Confidence            43   23445555555544

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=4.1e-30  Score=194.31  Aligned_cols=179  Identities=37%  Similarity=0.608  Sum_probs=145.2

Q ss_pred             ccccccccCchhhhHHHHhhhhcCCCCC--cEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCce
Q 042426           54 LPYYTGILGMPGLTAYGGLHELCSPKKG--EYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDA  130 (270)
Q Consensus        54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g--~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v  130 (270)
                      +|+...+++++++|||+++++.+++++|  ++|||+||+|++|++++|+|+.+|+ .|+.+++++++...+.+++|++++
T Consensus         2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v   81 (187)
T d1vj1a2           2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA   81 (187)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence            5655567899999999999999999987  8899999999999999999999999 566667787777766658999999


Q ss_pred             eecCCchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccC----CCCccchHHHHhhccee
Q 042426          131 FNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEK----PEGVHNLMQVVGKRICM  206 (270)
Q Consensus       131 i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~  206 (270)
                      +|++++ ++.+.+++.++.|+|+|||++|++.++.++++++++|+++.+|..+.+....    +........+..+++++
T Consensus        82 i~~~~~-~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~  160 (187)
T d1vj1a2          82 VNYKTG-NVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITR  160 (187)
T ss_dssp             EETTSS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEE
T ss_pred             eeccch-hHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEE
Confidence            999998 9999999998779999999999999999999999999999999765432211    11122234456788999


Q ss_pred             eeccccCcccchHHHHHHHHHHHHCCc
Q 042426          207 EGFLAGDFYHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~g~  233 (270)
                      .++.+.++.+...+.++++.+++++|+
T Consensus       161 ~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         161 ERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             EECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             EEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            998887776677889999999999886

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=3.7e-30  Score=193.70  Aligned_cols=172  Identities=22%  Similarity=0.246  Sum_probs=142.9

Q ss_pred             cc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      |+ ++|+++++++|||++|.+.+++++|++|+|+||+|++|++++|+|+..|++|+++++++++.+.++ ++|+++++|+
T Consensus         2 sfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa~~vi~~   80 (179)
T d1qora2           2 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINY   80 (179)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEET
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCCeEEEEC
Confidence            45 499999999999999998899999999999999999999999999999999999999999999999 9999999999


Q ss_pred             CCchhHHHHHHhHcCC-CccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhh-cceeeeccc
Q 042426          134 KEEPDLDAALNRCFPE-GIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGK-RICMEGFLA  211 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  211 (270)
                      +++ ++.+.+++.+++ ++|+++|++|++.+..++++++++|+++.++....     .....+...+..+ ...+.+..+
T Consensus        81 ~~~-d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~l  154 (179)
T d1qora2          81 REE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSG-----AVTGVNLGILNQKGSLYVTRPSL  154 (179)
T ss_dssp             TTS-CHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTC-----CCCCBCTHHHHHTTSCEEECCCH
T ss_pred             CCC-CHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccC-----CccccchhhhhccceEEEEeeEE
Confidence            998 999999999988 99999999999999999999999999999887663     2223344444333 334433333


Q ss_pred             cCc---ccchHHHHHHHHHHHHCCc
Q 042426          212 GDF---YHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       212 ~~~---~~~~~~~~~~~~~~~~~g~  233 (270)
                      ..+   ++...+.++++++++++|.
T Consensus       155 ~~~~~~~~~~~~~~~~l~~lv~~Gv  179 (179)
T d1qora2         155 QGYITTREELTEASNELFSLIASGV  179 (179)
T ss_dssp             HHHCCSHHHHHHHHHHHHHHHHTTS
T ss_pred             eeecCCHHHHHHHHHHHHHHHHCcC
Confidence            222   3344566778888888873

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=1.4e-30  Score=193.37  Aligned_cols=170  Identities=21%  Similarity=0.238  Sum_probs=136.1

Q ss_pred             cc-cccccCchhhhHHHHhh---hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce
Q 042426           55 PY-YTGILGMPGLTAYGGLH---ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA  130 (270)
Q Consensus        55 ~~-~~a~l~~~~~ta~~~l~---~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v  130 (270)
                      |+ ++|+++++++|||++++   +.++.++|++|||+||+|++|.+++|+|+.+|++|+++++++++.+.++ ++|++++
T Consensus         2 S~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa~~v   80 (176)
T d1xa0a2           2 TLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEV   80 (176)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEE
T ss_pred             CHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hccccee
Confidence            44 59999999999997654   4588899999999999999999999999999999999999999999999 9999999


Q ss_pred             eecCCchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecc
Q 042426          131 FNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFL  210 (270)
Q Consensus       131 i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (270)
                      +|+++  .+.+.++...++++|+|||++|+..+..++++|+++|+++.+|....     ....++...++.|++++.|..
T Consensus        81 i~~~~--~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g-----~~~~~~~~~~~~k~~~i~Gv~  153 (176)
T d1xa0a2          81 LARED--VMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGG-----AEVPTTVHPFILRGVSLLGID  153 (176)
T ss_dssp             EECC-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSS-----SCCCCCSHHHHHTTCEEEECC
T ss_pred             eecch--hHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccC-----cccCCCHHHHHHCCcEEEEEe
Confidence            99875  45555554444599999999999999999999999999999998663     445577889999999999975


Q ss_pred             ccCcccchHHHHHHHHHHHHCCceee
Q 042426          211 AGDFYHQYPKFLELVMLAIKEGKLVY  236 (270)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~g~~~~  236 (270)
                      ....   ..+...++++.+ .|+++|
T Consensus       154 ~~~~---~~~~~~~~~~~l-ag~lkP  175 (176)
T d1xa0a2         154 SVYC---PMDLRLRIWERL-AGDLKP  175 (176)
T ss_dssp             SSSC---CHHHHHHHHHHH-HTTTCC
T ss_pred             CCcC---CHHHHHHHHHHH-hcccCC
Confidence            4332   134445555555 366665

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.97  E-value=8.4e-29  Score=184.96  Aligned_cols=168  Identities=21%  Similarity=0.260  Sum_probs=148.3

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCC
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKE  135 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~  135 (270)
                      .+|+|+|++.|||+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|+++.+++++++.++ ++|+++++|+++
T Consensus         5 ~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~Ga~~~i~~~~   82 (174)
T d1f8fa2           5 LLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGATHVINSKT   82 (174)
T ss_dssp             GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTCSEEEETTT
T ss_pred             HHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcCCeEEEeCCC
Confidence            489999999999999888899999999999997 9999999999999999 6677788999999999 999999999998


Q ss_pred             chhHHHHHHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc
Q 042426          136 EPDLDAALNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF  214 (270)
Q Consensus       136 ~~~~~~~i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (270)
                      + ++.+.+++.+++++|++|||+|+ ..++.++++++++|+++.+|....    .....++...++.+++++.|+..++.
T Consensus        83 ~-~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~----~~~~~~~~~~~~~k~~~i~Gs~~g~~  157 (174)
T d1f8fa2          83 Q-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQL----GTTAQFDVNDLLLGGKTILGVVEGSG  157 (174)
T ss_dssp             S-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCST----TCCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred             c-CHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCC----CcccccCHHHHHHCCCEEEEEEecCC
Confidence            7 99999999998899999999997 478999999999999999987442    23345778889999999999887654


Q ss_pred             ccchHHHHHHHHHHHHCCc
Q 042426          215 YHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       215 ~~~~~~~~~~~~~~~~~g~  233 (270)
                        ..+++++++++++++|+
T Consensus       158 --~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         158 --SPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             --CHHHHHHHHHHHHHTTS
T ss_pred             --ChHHHHHHHHHHHHcCC
Confidence              33577999999999986

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.96  E-value=5.2e-28  Score=180.23  Aligned_cols=163  Identities=21%  Similarity=0.246  Sum_probs=146.5

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCC
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKE  135 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~  135 (270)
                      ++|++++++.|||+++ +..++++|++|+|+|++|++|++++|+++..|+ +|+++.++++++++++ ++|+++++++++
T Consensus         5 eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~Ga~~~i~~~~   82 (170)
T d1jvba2           5 EAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASM   82 (170)
T ss_dssp             HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEEETTT
T ss_pred             HHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-HcCCceeeccCC
Confidence            6999999999999999 568899999999999889999999999999996 9999999999999999 999999999988


Q ss_pred             chhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC
Q 042426          136 EPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD  213 (270)
Q Consensus       136 ~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (270)
                      . ++.+.+.+.+.+ ++|++|||+|++ .++.++++++++|+++.+|...      ....++...++.+++++.|++.++
T Consensus        83 ~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~------~~~~~~~~~~~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          83 Q-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFG------ADLHYHAPLITLSEIQFVGSLVGN  155 (170)
T ss_dssp             S-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSC------CCCCCCHHHHHHHTCEEEECCSCC
T ss_pred             c-CHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEecccc------CccccCHHHHHhCCcEEEEEecCC
Confidence            7 888888888877 899999999985 7889999999999999998754      234577888899999999998765


Q ss_pred             cccchHHHHHHHHHHHHCCc
Q 042426          214 FYHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~g~  233 (270)
                           +++++++++++++|+
T Consensus       156 -----~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 -----QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             -----HHHHHHHHHHHHTTS
T ss_pred             -----HHHHHHHHHHHHcCC
Confidence                 577999999999986

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.96  E-value=1.2e-28  Score=186.49  Aligned_cols=173  Identities=18%  Similarity=0.223  Sum_probs=140.3

Q ss_pred             cc-cccccCchhhhHHHHhhhhcCCCCCcEEEEe-cCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHhCCC
Q 042426           55 PY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVS-AASGAVGQLVGQFVKLVGCYVVGSARSKE----KVDLLKHKFGFD  128 (270)
Q Consensus        55 ~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~-ga~g~vG~~ai~la~~~g~~v~~~~~~~~----~~~~~~~~~g~~  128 (270)
                      |+ ++|+++++++|||++|.+.+++++|++++|+ ||+|++|++++|+||.+|++|++++++.+    +.+.++ ++|++
T Consensus         2 s~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~-~lGad   80 (189)
T d1gu7a2           2 TINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGAT   80 (189)
T ss_dssp             CHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCS
T ss_pred             CHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhh-hcccc
Confidence            44 5999999999999999999999999988885 78899999999999999999999986644    345666 89999


Q ss_pred             ceeecCCc--hhHHHHHHhH---cCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhc
Q 042426          129 DAFNYKEE--PDLDAALNRC---FPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKR  203 (270)
Q Consensus       129 ~vi~~~~~--~~~~~~i~~~---~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  203 (270)
                      +++++++.  .++.+.+.+.   .++++|++|||+|++.+..++++|+++|+++.+|....     ....++...++.|+
T Consensus        81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~l~~k~  155 (189)
T d1gu7a2          81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSF-----QPVTIPTSLYIFKN  155 (189)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSS-----CCEEECHHHHHHSC
T ss_pred             EEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccC-----CCccCcHHHHHHCC
Confidence            99987543  1344444443   34489999999999999999999999999999997653     33456778888999


Q ss_pred             ceeeeccccCc----ccchHHHHHHHHHHHHCCc
Q 042426          204 ICMEGFLAGDF----YHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       204 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~  233 (270)
                      +++.|++++.+    ++...+.++++.+++++|+
T Consensus       156 ~~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         156 FTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             CEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             cEEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            99999887654    2334567889999998885

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=3.8e-29  Score=186.17  Aligned_cols=145  Identities=24%  Similarity=0.313  Sum_probs=120.9

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCc
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEE  136 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~  136 (270)
                      ++|+++++++|||+++. .+++++|++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++|+.+.
T Consensus         5 eAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~   82 (171)
T d1iz0a2           5 EAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEV   82 (171)
T ss_dssp             HHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGGH
T ss_pred             HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-ccccceeeehhhh
Confidence            58999999999999995 589999999999999999999999999999999999999999999999 9999999988642


Q ss_pred             hhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCc
Q 042426          137 PDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDF  214 (270)
Q Consensus       137 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (270)
                         .+.+..  ++|+|+||||+| +.++.++++++++|+++.+|..+.     .....+...++.|++++.|+++.++
T Consensus        83 ---~~~~~~--~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g-----~~~~~~~~~~~~k~~~i~g~~~~~~  149 (171)
T d1iz0a2          83 ---PERAKA--WGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEG-----EVAPIPPLRLMRRNLAVLGFWLTPL  149 (171)
T ss_dssp             ---HHHHHH--TTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH
T ss_pred             ---hhhhhc--cccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCC-----CCCCccHHHHHHCCcEEEEEeCcCh
Confidence               222222  238999999988 678999999999999999998653     3345667788999999999987665

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=3.1e-27  Score=175.30  Aligned_cols=162  Identities=22%  Similarity=0.312  Sum_probs=140.0

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCc
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEE  136 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~  136 (270)
                      ++|+|+++++|||+++. .+++++|++|+|+|+ |++|++++|+++.+|++|+++++++++++.++ ++|+++++|+++.
T Consensus         5 ~aA~l~ca~~Ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~~~   81 (166)
T d1llua2           5 EIAPILCAGVTVYKGLK-QTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLGASLTVNARQE   81 (166)
T ss_dssp             HHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEETTTS
T ss_pred             HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-ccCccccccccch
Confidence            58999999999999995 589999999999987 99999999999999999999999999999999 9999999999987


Q ss_pred             hhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCccc
Q 042426          137 PDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYH  216 (270)
Q Consensus       137 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (270)
                       ++.+.+.+.+.+..++++++.+...++.++++++++|+++.+|....      ...++...++.+++++.|+..++   
T Consensus        82 -~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~~~---  151 (166)
T d1llua2          82 -DPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG------DFPTPIFDVVLKGLHIAGSIVGT---  151 (166)
T ss_dssp             -CHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCC---
T ss_pred             -hHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCC------CccCCHHHHHhCCcEEEEEeecC---
Confidence             88888887766544555555555799999999999999999997542      34577888999999999988765   


Q ss_pred             chHHHHHHHHHHHHCCc
Q 042426          217 QYPKFLELVMLAIKEGK  233 (270)
Q Consensus       217 ~~~~~~~~~~~~~~~g~  233 (270)
                        +++++++++++.+|.
T Consensus       152 --~~d~~e~l~l~~~Gl  166 (166)
T d1llua2         152 --RADLQEALDFAGEGL  166 (166)
T ss_dssp             --HHHHHHHHHHHHTTS
T ss_pred             --HHHHHHHHHHHHCcC
Confidence              567889999998873

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=4.1e-27  Score=175.12  Aligned_cols=164  Identities=23%  Similarity=0.281  Sum_probs=145.0

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCc
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEE  136 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~  136 (270)
                      ++|+++++++|||++++ ..++++|++|+|+|+ |++|++++|+++..|++|++++++++++++++ ++|++.++++.+.
T Consensus         5 eAA~l~~~~~Ta~~al~-~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k-~~Ga~~~~~~~~~   81 (168)
T d1rjwa2           5 EAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNPLKE   81 (168)
T ss_dssp             HHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECTTTS
T ss_pred             HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh-hcCcceecccccc
Confidence            59999999999999995 578999999999986 99999999999999999999999999999999 9999999999988


Q ss_pred             hhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCccc
Q 042426          137 PDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYH  216 (270)
Q Consensus       137 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (270)
                       ++.+.+++.+++..|+++|+.+...++.++++++++|+++.+|...      ....++...++.+++++.|+...+   
T Consensus        82 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~------~~~~~~~~~~~~~~~~i~gs~~~~---  151 (168)
T d1rjwa2          82 -DAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPP------EEMPIPIFDTVLNGIKIIGSIVGT---  151 (168)
T ss_dssp             -CHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCS------SEEEEEHHHHHHTTCEEEECCSCC---
T ss_pred             -hhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEeccccc------CCCCCCHHHHHHCCcEEEEEeeCC---
Confidence             8999999988876666666666678999999999999999998754      234577888899999999987755   


Q ss_pred             chHHHHHHHHHHHHCCcee
Q 042426          217 QYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       217 ~~~~~~~~~~~~~~~g~~~  235 (270)
                        +++++++++++++|+++
T Consensus       152 --~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 --RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             --HHHHHHHHHHHHTTSCC
T ss_pred             --HHHHHHHHHHHHhCCCC
Confidence              57899999999999875

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.95  E-value=1.1e-26  Score=173.12  Aligned_cols=161  Identities=20%  Similarity=0.325  Sum_probs=139.4

Q ss_pred             cccccCchhhhHHHHhhhhc-CCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecC
Q 042426           57 YTGILGMPGLTAYGGLHELC-SPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYK  134 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~-~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~  134 (270)
                      ++|+|+++++|||+++.+.. .+++|++|+|+|+ |++|++++|+++.+|+ +|+++++++++++.++ ++|++++++++
T Consensus         8 eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~~ga~~~i~~~   85 (172)
T d1h2ba2           8 EMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDAR   85 (172)
T ss_dssp             HTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEEEETT
T ss_pred             HHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-hcccceeecCc
Confidence            68999999999999997765 5899999999997 9999999999999997 7888888999999999 99999999988


Q ss_pred             CchhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeecccc
Q 042426          135 EEPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAG  212 (270)
Q Consensus       135 ~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (270)
                      ++  ..+...+.+.+ ++|++|||+|+. .++.++++++++|+++.+|..+       ...++...++.+++++.|+..+
T Consensus        86 ~~--~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-------~~~~~~~~l~~k~~~i~Gs~~~  156 (172)
T d1h2ba2          86 RD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-------ELRFPTIRVISSEVSFEGSLVG  156 (172)
T ss_dssp             SC--HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-------CCCCCHHHHHHTTCEEEECCSC
T ss_pred             cc--HHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-------cccCCHHHHHhCCcEEEEEEec
Confidence            74  44555566666 999999999985 7899999999999999999632       2347788899999999999887


Q ss_pred             CcccchHHHHHHHHHHHHCCc
Q 042426          213 DFYHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~g~  233 (270)
                      +     .++++++++++.+|+
T Consensus       157 ~-----~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         157 N-----YVELHELVTLALQGK  172 (172)
T ss_dssp             C-----HHHHHHHHHHHHTTS
T ss_pred             C-----HHHHHHHHHHHHcCC
Confidence            6     467899999999886

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=6.7e-27  Score=175.98  Aligned_cols=164  Identities=20%  Similarity=0.234  Sum_probs=138.0

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCC
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKE  135 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~  135 (270)
                      .+|++.++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|+++++|+++
T Consensus         5 ~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~   82 (182)
T d1vj0a2           5 VLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSEEEETTT
T ss_pred             HHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-Cccchhheecccccccccccccccccccccccc-cccceEEEeccc
Confidence            378889999999999988899999999999997 9999999999999998 8999999999999998 999999999987


Q ss_pred             chhH---HHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccch-HHHHhhcceeeec
Q 042426          136 EPDL---DAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL-MQVVGKRICMEGF  209 (270)
Q Consensus       136 ~~~~---~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  209 (270)
                      . ++   .+.+.+.+.+ ++|+||||+|++ .++.++++++++|+++.+|....    ....+.+. ..++.|++++.|+
T Consensus        83 ~-~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~----~~~~~~~~~~~l~~k~l~i~G~  157 (182)
T d1vj0a2          83 T-SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVP----QDPVPFKVYEWLVLKNATFKGI  157 (182)
T ss_dssp             S-CHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSC----CCCEEECHHHHTTTTTCEEEEC
T ss_pred             c-chHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCC----CCccccccHHHHHHCCcEEEEE
Confidence            6 54   4456777777 999999999985 78999999999999999987442    12223333 3467789999999


Q ss_pred             cccCcccchHHHHHHHHHHHHCC
Q 042426          210 LAGDFYHQYPKFLELVMLAIKEG  232 (270)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~g  232 (270)
                      +..+     .+.+++++++++++
T Consensus       158 ~~~~-----~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         158 WVSD-----TSHFVKTVSITSRN  175 (182)
T ss_dssp             CCCC-----HHHHHHHHHHHHTC
T ss_pred             EeCC-----HHHHHHHHHHHHHC
Confidence            8865     56778888887765

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.95  E-value=2.7e-27  Score=176.22  Aligned_cols=165  Identities=19%  Similarity=0.143  Sum_probs=136.4

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCC
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKE  135 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~  135 (270)
                      +++.++++++|+|+++ +.+++++|++|+|+|+ |++|++++|+++.+|+ +|+++++++++++.++ ++|+++++|+++
T Consensus         5 ~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa~~~i~~~~   81 (174)
T d1jqba2           5 NAVMITDMMTTGFHGA-ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGATDILNYKN   81 (174)
T ss_dssp             HHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTCSEEECGGG
T ss_pred             HHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCccccccccc
Confidence            3777889999999998 5689999999999987 9999999999999998 8999999999999998 999999999988


Q ss_pred             chhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCcc--chHHHHhhcceeeeccc
Q 042426          136 EPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVH--NLMQVVGKRICMEGFLA  211 (270)
Q Consensus       136 ~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  211 (270)
                      + ++.+.+.+.+++ |+|++|||+|++ .++.++++++++|+++.+|.....    .....  ..+....++.++.+...
T Consensus        82 ~-~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          82 G-HIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSG----DALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             S-CHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSS----SEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             h-hHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCC----CcCcCcHhHHHHHhCccEEEEecC
Confidence            7 899999999988 999999999974 789999999999999999975421    11111  11223446677877765


Q ss_pred             cCcccchHHHHHHHHHHHHCCc
Q 042426          212 GDFYHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~g~  233 (270)
                      ...    +...+++.+++++|+
T Consensus       157 ~~~----r~~~e~l~~li~~gk  174 (174)
T d1jqba2         157 PGG----RLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCH----HHHHHHHHHHHHTTS
T ss_pred             CCC----cccHHHHHHHHHcCC
Confidence            432    456678888988875

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.94  E-value=3.3e-26  Score=170.10  Aligned_cols=166  Identities=19%  Similarity=0.186  Sum_probs=134.3

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCC
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKE  135 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~  135 (270)
                      .+|.|.|++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++.++++++.++ ++|+++++++..
T Consensus         5 ~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~Ga~~~i~~~~   82 (174)
T d1e3ia2           5 RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALGATDCLNPRE   82 (174)
T ss_dssp             HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-HhCCCcccCCcc
Confidence            589999999999999988899999999999986 9999999999999999 7889999999999999 999999998754


Q ss_pred             chhHHHHHH-hHcCCCccEEEeCCCcc-hHHHHHHccccC-CEEEEEcccccccccCCCCccchHHHHhhcceeeecccc
Q 042426          136 EPDLDAALN-RCFPEGIDIYFENVGGK-MLDAVLLNMRIC-GHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAG  212 (270)
Q Consensus       136 ~~~~~~~i~-~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (270)
                      .++..+.+. ...++|+|++|||+|.+ .++.++++++++ |+++.+|....      ...++...++ .+.++.|+..+
T Consensus        83 ~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~------~~~i~~~~~~-~~k~i~Gs~~G  155 (174)
T d1e3ia2          83 LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD------EMTIPTVDVI-LGRSINGTFFG  155 (174)
T ss_dssp             CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS------EEEEEHHHHH-TTCEEEECSGG
T ss_pred             chhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC------ccccchHHHh-ccCEEEEEEee
Confidence            323444444 44445999999999985 889999999996 99999998542      2234444443 35678888776


Q ss_pred             CcccchHHHHHHHHHHHHCCc
Q 042426          213 DFYHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~g~  233 (270)
                      ++  ...++++++++++.+|+
T Consensus       156 s~--~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         156 GW--KSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             GC--CHHHHHHHHHHHHHTTS
T ss_pred             CC--ChHHHHHHHHHHHHCcC
Confidence            54  23577889999988875

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=5.1e-28  Score=179.95  Aligned_cols=165  Identities=20%  Similarity=0.234  Sum_probs=133.6

Q ss_pred             cccccCchhhhHHHHhh---hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           57 YTGILGMPGLTAYGGLH---ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~---~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      ++|+++++++|||++++   +.+...++++|||+||+|++|++++|+||.+|++|+++++++++.+.++ ++|+++++|+
T Consensus         5 ~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~-~lGad~vi~~   83 (177)
T d1o89a2           5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGASRVLPR   83 (177)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTEEEEEEG
T ss_pred             HHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH-hhcccccccc
Confidence            69999999999998764   3344555679999999999999999999999999999999999999998 9999999999


Q ss_pred             CCchhHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC
Q 042426          134 KEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD  213 (270)
Q Consensus       134 ~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (270)
                      ++. ++.+.+   ....+|.++|++|++.+..++++++++|+++.+|..+.     .....+...++.|++++.|++...
T Consensus        84 ~~~-~~~~~l---~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~-----~~~~~~~~~~~~k~~~i~G~~~~~  154 (177)
T d1o89a2          84 DEF-AESRPL---EKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGG-----FTLPTTVMPFILRNVRLQGVDSVM  154 (177)
T ss_dssp             GGS-SSCCSS---CCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTC-----SCCCCCSHHHHHHCCEEEECCSSS
T ss_pred             ccH-HHHHHH---HhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCC-----ccccccHHHHHHCCCeEEEEeccc
Confidence            765 443322   22367999999999999999999999999999998764     334466788899999999987654


Q ss_pred             c-ccchHHHHHHHHHHHHC
Q 042426          214 F-YHQYPKFLELVMLAIKE  231 (270)
Q Consensus       214 ~-~~~~~~~~~~~~~~~~~  231 (270)
                      . ++...+.++++.+.+.+
T Consensus       155 ~~~~~~~~~~~~L~~~l~~  173 (177)
T d1o89a2         155 TPPERRAQAWQRLVADLPE  173 (177)
T ss_dssp             CCHHHHHHHHHHHHHHSCH
T ss_pred             CCHHHHHHHHHHHHHhccc
Confidence            3 44445556666655443

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=7.8e-26  Score=169.36  Aligned_cols=169  Identities=20%  Similarity=0.199  Sum_probs=136.0

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCC
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKE  135 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~  135 (270)
                      ++|.++|++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|+++++++++++.++ ++|+++++|+.+
T Consensus         5 ~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~lGa~~~i~~~~   82 (176)
T d2fzwa2           5 KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATECINPQD   82 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEEECGGG
T ss_pred             HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-HhCCcEEEeCCc
Confidence            489999999999999988899999999999998 8999999999999997 7888888899999999 999999998864


Q ss_pred             c-hhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC
Q 042426          136 E-PDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD  213 (270)
Q Consensus       136 ~-~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (270)
                      . .+..+.++..+++++|++||++|+. .++.+..+++++|+++.++....    ......+....+.++.++.|+..++
T Consensus        83 ~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~----~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2fzwa2          83 FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAA----SGEEIATRPFQLVTGRTWKGTAFGG  158 (176)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCC----TTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             hhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeecc----ccccccccHHHHHCCCEEEEEeeeC
Confidence            2 2566666666666999999999985 67888889999988877654332    1222233344456778999988766


Q ss_pred             cccchHHHHHHHHHHHHCCc
Q 042426          214 FYHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~g~  233 (270)
                      .  ...+++.++++++++|+
T Consensus       159 ~--~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         159 W--KSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             C--CHHHHHHHHHHHHHTTS
T ss_pred             C--cHHHHHHHHHHHHHcCC
Confidence            4  23567889999999885

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=5.2e-26  Score=168.79  Aligned_cols=160  Identities=21%  Similarity=0.272  Sum_probs=132.5

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCc
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEE  136 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~  136 (270)
                      .+|+++|++.|+|+++ +.+++++|++|+|+|+ |++|++++|+++.+|++++++++++++++.++ ++|+++++|+.+.
T Consensus         8 ~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~-~lGad~~i~~~~~   84 (168)
T d1uufa2           8 AVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADEVVNSRNA   84 (168)
T ss_dssp             HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEETTCH
T ss_pred             HHHHHHhHHHHHHHHH-HHhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHh-ccCCcEEEECchh
Confidence            4788999999999999 5689999999999996 99999999999999999999999999999998 9999999998875


Q ss_pred             hhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcc
Q 042426          137 PDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFY  215 (270)
Q Consensus       137 ~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (270)
                       +....    ..+++|++|||+|++ .++.++++++++|+++.+|....     +....+...++.+++++.|+..++  
T Consensus        85 -~~~~~----~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~l~~k~~~i~Gs~~~~--  152 (168)
T d1uufa2          85 -DEMAA----HLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT-----PHKSPEVFNLIMKRRAIAGSMIGG--  152 (168)
T ss_dssp             -HHHHT----TTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCSCC--
T ss_pred             -hHHHH----hcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCC-----CcccccHHHHHHCCcEEEEEeecC--
Confidence             43221    123799999999975 79999999999999999997542     333466778888999999998766  


Q ss_pred             cchHHHHHHHHHHHHCCce
Q 042426          216 HQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       216 ~~~~~~~~~~~~~~~~g~~  234 (270)
                         .++++++++++.++++
T Consensus       153 ---~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 ---IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             ---HHHHHHHHHHHHHHTC
T ss_pred             ---HHHHHHHHHHHHHcCC
Confidence               5678888888877653

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=5.2e-27  Score=174.21  Aligned_cols=161  Identities=20%  Similarity=0.178  Sum_probs=135.7

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCc
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEE  136 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~  136 (270)
                      .||++.|++.|+|+++. .+++++|++|+|+|+ |++|++++|+++.+|++|+++++++++++.++ ++|+++++++.+.
T Consensus         5 ~AApl~cag~Ta~~al~-~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~   81 (168)
T d1piwa2           5 LAAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEE   81 (168)
T ss_dssp             HHGGGGTHHHHHHHHHH-HTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEEGGGT
T ss_pred             HHHHHHHHHHHHHHHHH-HhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-ccCCcEEeeccch
Confidence            37899999999999995 589999999999997 99999999999999999999999999999999 9999999988654


Q ss_pred             hhHHHHHHhHcCCCccEEEeCCCcc---hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC
Q 042426          137 PDLDAALNRCFPEGIDIYFENVGGK---MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD  213 (270)
Q Consensus       137 ~~~~~~i~~~~~~~~d~v~d~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (270)
                      .++.+    ...+++|.++||++..   .+..++++++++|+++.+|....      ...++...++.+++++.|+..++
T Consensus        82 ~~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~g~  151 (168)
T d1piwa2          82 GDWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYGLKAVSISYSALGS  151 (168)
T ss_dssp             SCHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGGCBSCEEEECCCCC
T ss_pred             HHHHH----hhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccc------cccccHHHHHhCCcEEEEEeeCC
Confidence            24433    2334799999998863   47889999999999999997542      23455666788999999988766


Q ss_pred             cccchHHHHHHHHHHHHCCcee
Q 042426          214 FYHQYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~g~~~  235 (270)
                           ++.++++++++++|+++
T Consensus       152 -----~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         152 -----IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             -----HHHHHHHHHHHHHTTCC
T ss_pred             -----HHHHHHHHHHHHhCCCC
Confidence                 57889999999999875

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.94  E-value=1.1e-25  Score=167.53  Aligned_cols=167  Identities=18%  Similarity=0.172  Sum_probs=134.5

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCC
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKE  135 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~  135 (270)
                      ++|.|.|++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|+++++++++++.++ ++|+++++|+++
T Consensus         4 eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa~~~i~~~~   81 (174)
T d1p0fa2           4 ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATECLNPKD   81 (174)
T ss_dssp             GGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCCcEEEcCCC
Confidence            589999999999999888899999999999997 9999999999999998 8999999999999999 999999999876


Q ss_pred             chh-HHHHHHhHcCCCccEEEeCCCcc-hHHHHHHcccc-CCEEEEEcccccccccCCCCccchHHHHhhcceeeecccc
Q 042426          136 EPD-LDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRI-CGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAG  212 (270)
Q Consensus       136 ~~~-~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (270)
                      .++ ..+.....+++++|++||++|+. .++.++..+.+ +|+++.+|....    ....+++... +.++.++.|+..+
T Consensus        82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~----~~~~~~~~~~-~~~~~~i~Gs~~G  156 (174)
T d1p0fa2          82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP----NERLPLDPLL-LLTGRSLKGSVFG  156 (174)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCT----TCCEEECTHH-HHTTCEEEECSGG
T ss_pred             chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecC----ccccccCHHH-HhCCCEEEEEEeC
Confidence            523 44455555556999999999985 77888888876 599999997542    2222333333 4467899998876


Q ss_pred             CcccchHHHHHHHHHHHHCCc
Q 042426          213 DFYHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~g~  233 (270)
                      +..   .++++++++++.+|+
T Consensus       157 ~~~---~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         157 GFK---GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             GCC---GGGHHHHHHHHHTTS
T ss_pred             CCC---HHHHHHHHHHHHcCC
Confidence            541   346788899988875

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.7e-26  Score=169.15  Aligned_cols=164  Identities=16%  Similarity=0.188  Sum_probs=137.6

Q ss_pred             cccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeec
Q 042426           55 PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNY  133 (270)
Q Consensus        55 ~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~  133 (270)
                      |++.|++..++++||+++ +.+++++|++|+|+|+ |++|++++|+++.+|+ +|+++++++++++.++ ++|+++++++
T Consensus         2 S~e~Aal~epla~a~~a~-~~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~   78 (171)
T d1pl8a2           2 TFEEGALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQI   78 (171)
T ss_dssp             CHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCCcccccc
Confidence            456677888999999998 5688999999999997 9999999999999999 8999999999999998 9999999888


Q ss_pred             CCchhHHHHHHh---HcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426          134 KEEPDLDAALNR---CFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF  209 (270)
Q Consensus       134 ~~~~~~~~~i~~---~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (270)
                      .+. ++.+..+.   ..+.++|++|||+|++ .++.++++++++|+++.+|...      ....++...++.|++++.|+
T Consensus        79 ~~~-~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~------~~~~~~~~~~~~k~l~i~Gs  151 (171)
T d1pl8a2          79 SKE-SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGS------EMTTVPLLHAAIREVDIKGV  151 (171)
T ss_dssp             SSC-CHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCC------SCCCCCHHHHHHTTCEEEEC
T ss_pred             ccc-ccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCC------CCCccCHHHHHHCCcEEEEE
Confidence            765 55443333   3334899999999985 7899999999999999999854      23457788999999999998


Q ss_pred             cccCcccchHHHHHHHHHHHHCCce
Q 042426          210 LAGDFYHQYPKFLELVMLAIKEGKL  234 (270)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~g~~  234 (270)
                      +...      +.++++++++++|++
T Consensus       152 ~~~~------~~~~~al~li~~gki  170 (171)
T d1pl8a2         152 FRYC------NTWPVAISMLASKSV  170 (171)
T ss_dssp             CSCS------SCHHHHHHHHHTTSC
T ss_pred             eCCH------hHHHHHHHHHHcCCC
Confidence            6432      347889999999986

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.94  E-value=1.9e-25  Score=166.26  Aligned_cols=164  Identities=18%  Similarity=0.209  Sum_probs=134.0

Q ss_pred             cccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecC
Q 042426           55 PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYK  134 (270)
Q Consensus        55 ~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~  134 (270)
                      |++.|+|..++++||+++ +.+++++|++|+|+|+ |++|++++|+++.+|++|+++++++++++.++ ++|++..++++
T Consensus         2 S~e~Aal~ePla~a~~a~-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-~~ga~~~~~~~   78 (170)
T d1e3ja2           2 SLEEGALLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVVD   78 (170)
T ss_dssp             CHHHHHTHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEECC
T ss_pred             CHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEcc-cccchhhHhhHhhhcccccccchHHHHHHHHH-HcCCcEEEecc
Confidence            456677778999999999 5678999999999985 99999999999999999999999999999999 99998665443


Q ss_pred             C--c--hhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeec
Q 042426          135 E--E--PDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGF  209 (270)
Q Consensus       135 ~--~--~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (270)
                      .  .  .+..+.+.+..++++|++|||+|++ .++.++++++++|+++.+|.++      ....++...++.|++++.|+
T Consensus        79 ~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~------~~~~~~~~~~~~k~i~i~gs  152 (170)
T d1e3ja2          79 PAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS------QMVTVPLVNACAREIDIKSV  152 (170)
T ss_dssp             TTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCS------SCCCCCHHHHHTTTCEEEEC
T ss_pred             ccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCC------CCCCcCHHHHHHCCCEEEEE
Confidence            2  2  1344555555555999999999985 7899999999999999999754      22357788899999999998


Q ss_pred             cccCcccchHHHHHHHHHHHHCCc
Q 042426          210 LAGDFYHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~g~  233 (270)
                      +...      +.++++++++++|+
T Consensus       153 ~~~~------~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         153 FRYC------NDYPIALEMVASGR  170 (170)
T ss_dssp             CSCS------SCHHHHHHHHHTTS
T ss_pred             ECCH------HHHHHHHHHHHcCC
Confidence            6432      34678889988885

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.93  E-value=3.4e-25  Score=165.67  Aligned_cols=169  Identities=18%  Similarity=0.198  Sum_probs=134.8

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCC
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKE  135 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~  135 (270)
                      ++|.|+|++.|+|+++.+.+++++||+|+|+|+ |++|++++++++..|+ +|+++++++++++.++ ++|+++++++.+
T Consensus         5 ~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~Ga~~~i~~~~   82 (176)
T d2jhfa2           5 KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGATECVNPQD   82 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-HhCCeeEEecCC
Confidence            599999999999999988999999999999998 8999999999999986 9999999999999998 999998888754


Q ss_pred             chh-HHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccC
Q 042426          136 EPD-LDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGD  213 (270)
Q Consensus       136 ~~~-~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (270)
                      ..+ ..+......++++|++||++|.+ .++.++.+++++|+.+.++....    ..........++.+++++.|+..++
T Consensus        83 ~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2jhfa2          83 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP----DSQNLSMNPMLLLSGRTWKGAIFGG  158 (176)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCC----TTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             chhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCC----CcccccccHHHHhCCCEEEEEEEeC
Confidence            323 45555555556999999999985 67888999988754444443221    1222233445677899999998765


Q ss_pred             cccchHHHHHHHHHHHHCCc
Q 042426          214 FYHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~g~  233 (270)
                      .  ..+++++++++++.+|+
T Consensus       159 ~--~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         159 F--KSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             C--CHHHHHHHHHHHHHTTS
T ss_pred             C--CHHHHHHHHHHHHHCcC
Confidence            4  34677889999998875

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=1.1e-26  Score=171.09  Aligned_cols=162  Identities=22%  Similarity=0.251  Sum_probs=125.7

Q ss_pred             chhhhHHHH---hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhH
Q 042426           63 MPGLTAYGG---LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDL  139 (270)
Q Consensus        63 ~~~~ta~~~---l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~  139 (270)
                      ++++|||.+   |.+.+..+++++|||+||+|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++++  ..
T Consensus         3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~-~lGad~vi~~~~--~~   79 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISRED--VY   79 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHH--HC
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH-hhcccceEeccc--hh
Confidence            356677754   545566778889999999999999999999999999999999999999999 999999988753  22


Q ss_pred             HHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchH
Q 042426          140 DAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYP  219 (270)
Q Consensus       140 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (270)
                      .+.+....++++|+|||++|++.+..++++|+++|+++.+|....     ...+.+...++.+++++.|......+   .
T Consensus        80 ~~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g-----~~~~~~~~~l~~k~~~i~G~~~~~~~---~  151 (167)
T d1tt7a2          80 DGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGG-----GEVPATVYPFILRGVSLLGIDSVYCP---M  151 (167)
T ss_dssp             SSCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSC-----SCEEECSHHHHTSCCEEEECCSSSCC---H
T ss_pred             chhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCC-----CcccCCHHHHHHCCcEEEEEecCCCC---H
Confidence            223333334499999999999999999999999999999998764     34457788899999999997654432   2


Q ss_pred             HHHHHHHHHHHCCceee
Q 042426          220 KFLELVMLAIKEGKLVY  236 (270)
Q Consensus       220 ~~~~~~~~~~~~g~~~~  236 (270)
                      +...++++.+. +.++|
T Consensus       152 ~~~~~~~~~l~-~~L~P  167 (167)
T d1tt7a2         152 DVRAAVWERMS-SDLKP  167 (167)
T ss_dssp             HHHHHHHHHTT-TTSCC
T ss_pred             HHHHHHHHHHH-hcCCC
Confidence            33444444442 34443

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.93  E-value=8.6e-25  Score=163.40  Aligned_cols=167  Identities=18%  Similarity=0.163  Sum_probs=133.8

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCC
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKE  135 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~  135 (270)
                      ++|.|+|++.|+|+++.+.+++++|++|+|+|+ |++|+++++.++..|+ +|+++++++++++.++ ++|+++++|+.+
T Consensus         5 ~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~GAd~~in~~~   82 (175)
T d1cdoa2           5 TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATDFVNPND   82 (175)
T ss_dssp             HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCEEECGGG
T ss_pred             HHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-HcCCcEEEcCCC
Confidence            589999999999999988899999999999997 9999999999998887 8999999999999999 999999999876


Q ss_pred             chhHHHHHHhHcC-CCccEEEeCCCcc-hHHHHHHccccCCEE-EEEcccccccccCCCCccchHHHHhhcceeeecccc
Q 042426          136 EPDLDAALNRCFP-EGIDIYFENVGGK-MLDAVLLNMRICGHI-AVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAG  212 (270)
Q Consensus       136 ~~~~~~~i~~~~~-~~~d~v~d~~g~~-~~~~~~~~l~~~G~~-v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (270)
                      ..+..+.+.+.+. +|+|+++|++|+. .+..++.++.++|.+ +..+..+      .....+....+.++.++.|+..+
T Consensus        83 ~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~------~~~~~~~~~~~~~~~~i~Gs~~G  156 (175)
T d1cdoa2          83 HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD------LHDVATRPIQLIAGRTWKGSMFG  156 (175)
T ss_dssp             CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS------SSCEEECHHHHHTTCEEEECSGG
T ss_pred             cchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC------CcccCccHHHHHCCcEEEEEEEe
Confidence            5244455555544 4999999999984 678888888877544 4454433      22234455566778899998877


Q ss_pred             CcccchHHHHHHHHHHHHCCc
Q 042426          213 DFYHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~g~  233 (270)
                      ++  ..+++++++++++.+|+
T Consensus       157 ~~--~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         157 GF--KGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             GC--CHHHHHHHHHHHHHTTS
T ss_pred             CC--cHHHHHHHHHHHHHcCC
Confidence            64  34678899999999885

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.92  E-value=9.7e-25  Score=162.60  Aligned_cols=165  Identities=17%  Similarity=0.162  Sum_probs=132.1

Q ss_pred             cccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCC
Q 042426           57 YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKE  135 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~  135 (270)
                      .+|.++|++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++.++++++.++ ++|+++++|+++
T Consensus         6 ~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~GA~~~in~~~   83 (176)
T d1d1ta2           6 KVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AVGATECISPKD   83 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HHTCSEEECGGG
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hcCCcEEECccc
Confidence            489999999999999988899999999999997 9999999999999996 8999999999999999 999999999876


Q ss_pred             chhHHHHHHhHcCC-CccEEEeCCCcc-hHHHHHHccccC-CEEEEEcccccccccCCCCccchHHHHhhcceeeecccc
Q 042426          136 EPDLDAALNRCFPE-GIDIYFENVGGK-MLDAVLLNMRIC-GHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAG  212 (270)
Q Consensus       136 ~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (270)
                      .+...+.+.+.+.+ |+|+++|++|.. .+..++..+.++ |+++.+|....    ......+.. .+.++.++.|+..+
T Consensus        84 ~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~----~~~~~~~~~-~~~~~~~i~Gs~~G  158 (176)
T d1d1ta2          84 STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPS----AKMLTYDPM-LLFTGRTWKGCVFG  158 (176)
T ss_dssp             CSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCT----TCCEEECTH-HHHTTCEEEECSGG
T ss_pred             cchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEcccc----ccccCCCHH-HHhCCCEEEEEEEe
Confidence            52345566665555 999999999985 677788877665 99999997543    122223333 34467899998876


Q ss_pred             CcccchHHHHHHHHHHHH
Q 042426          213 DFYHQYPKFLELVMLAIK  230 (270)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~  230 (270)
                      +.  ..++++.++++++.
T Consensus       159 ~~--~~~~dip~li~~~~  174 (176)
T d1d1ta2         159 GL--KSRDDVPKLVTEFL  174 (176)
T ss_dssp             GC--CHHHHHHHHHHHHT
T ss_pred             CC--CcHHHHHHHHHHHh
Confidence            64  23566777776654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.91  E-value=1.5e-23  Score=158.57  Aligned_cols=167  Identities=20%  Similarity=0.188  Sum_probs=136.6

Q ss_pred             ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCc
Q 042426           58 TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEE  136 (270)
Q Consensus        58 ~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~  136 (270)
                      .++|+..+.|||+++ +.+++++|++|+|+|+ |++|++++++++.+|+ +|++++.++++++.++ ++|+++++++.+.
T Consensus         4 ~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~~   80 (195)
T d1kola2           4 LTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQGFEIADLSLDT   80 (195)
T ss_dssp             HGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCEEEETTSSS
T ss_pred             HHhcccHHHHHHHHH-HHhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hccccEEEeCCCc
Confidence            578899999999998 5799999999999987 9999999999999998 8999999999999999 9999999998887


Q ss_pred             hhHHHHHHhHcCC-CccEEEeCCCc----------------chHHHHHHccccCCEEEEEccccccccc-------CCCC
Q 042426          137 PDLDAALNRCFPE-GIDIYFENVGG----------------KMLDAVLLNMRICGHIAVCGMISQYNIE-------KPEG  192 (270)
Q Consensus       137 ~~~~~~i~~~~~~-~~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~~~~~~-------~~~~  192 (270)
                       ++.+.+.+.+++ ++|++|||+|.                ..++.++++++++|+++.+|........       ....
T Consensus        81 -~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~  159 (195)
T d1kola2          81 -PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSL  159 (195)
T ss_dssp             -CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCC
T ss_pred             -CHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCce
Confidence             999999999888 99999999984                3689999999999999999975432110       0112


Q ss_pred             ccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCc
Q 042426          193 VHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGK  233 (270)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  233 (270)
                      ...+..++.|+.++.+...     ..++.++++++++.+++
T Consensus       160 ~~~~~~~~~k~~~i~~g~~-----~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         160 SIRFGLGWAKSHSFHTGQT-----PVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCCHHHHHHTTCEEEESSC-----CHHHHHHHHHHHHHTTS
T ss_pred             eeeHHHHHhhcceeccCCC-----chHHHHHHHHHHHHcCC
Confidence            3445566777887754222     23566788888887764

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=6.7e-17  Score=101.11  Aligned_cols=70  Identities=24%  Similarity=0.314  Sum_probs=64.0

Q ss_pred             cccccCchhhhHHHHhh---hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 042426           57 YTGILGMPGLTAYGGLH---ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF  127 (270)
Q Consensus        57 ~~a~l~~~~~ta~~~l~---~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~  127 (270)
                      ++++++++++|||.+++   +....+++++|+|+|++|++|.+++|+++.+|++|+++++++++.++++ ++|+
T Consensus         5 eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~-~lGA   77 (77)
T d1o8ca2           5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGA   77 (77)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTE
T ss_pred             HHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-HCCC
Confidence            68999999999998765   3466789999999999999999999999999999999999999999999 8874

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=4.7e-16  Score=111.93  Aligned_cols=80  Identities=15%  Similarity=0.160  Sum_probs=72.5

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSP   78 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~   78 (270)
                      .+++|+|.++|+++++|++||||++.    |+|+||+++++++ ++++ |++  +++ ++|++++.+.|+|+.+...++.
T Consensus        66 ~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~-~~~i-P~~--ls~~~Aa~~~~~~~ta~~~~~~~g~~  141 (150)
T d1yb5a1          66 SDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHT-VYKL-PEK--LKPVIGSQYPLEKVAEAHENIIHGSG  141 (150)
T ss_dssp             SCEEEEEEEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGG-EEEC-CTT--CCCCEEEEEEGGGHHHHHHHHHHSSC
T ss_pred             cceeeeeEeecceeeccccCccccccccccccccccccccccc-cccc-cCC--CCHHHHHHhhhhhhhehhhheEEcCc
Confidence            46788888999999999999999877    8999999999999 9999 999  555 5899999999999998888999


Q ss_pred             CCCcEEEEe
Q 042426           79 KKGEYVYVS   87 (270)
Q Consensus        79 ~~g~~vlI~   87 (270)
                      +.|+++||+
T Consensus       142 ~~G~~vliL  150 (150)
T d1yb5a1         142 ATGKMILLL  150 (150)
T ss_dssp             CSSEEEEEC
T ss_pred             ccCCEEEEC
Confidence            999999984

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.57  E-value=5.3e-16  Score=115.18  Aligned_cols=81  Identities=11%  Similarity=-0.003  Sum_probs=70.1

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|+++|++|++|++||+|...                               |+|+||+++++++ ++++ |++  
T Consensus        64 E~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~--  139 (178)
T d1e3ja1          64 EASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF-CHKL-PDN--  139 (178)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTT--
T ss_pred             ccceEEEecCcccCCCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccc-eeeC-CCC--
Confidence            4566677789999999999999531                               7899999999999 9999 999  


Q ss_pred             ccc-cccccCchhhhHHHHhhhhcCCCCCcEEEEecCC
Q 042426           54 LPY-YTGILGMPGLTAYGGLHELCSPKKGEYVYVSAAS   90 (270)
Q Consensus        54 ~~~-~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~   90 (270)
                      ++. ++|+++.++.|||+++ +.+++++|++|+|+||.
T Consensus       140 ~~~~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~C  176 (178)
T d1e3ja1         140 CNVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMISC  176 (178)
T ss_dssp             CCCGGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEEC
T ss_pred             CCHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEccc
Confidence            555 5888999999999998 57889999999999873

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=5.7e-15  Score=105.92  Aligned_cols=80  Identities=10%  Similarity=0.080  Sum_probs=67.4

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCSP   78 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~~   78 (270)
                      .+++|+|.++|++|++|++||||+..    |+|+||++++++. ++++ |++++.+. ++++++....++++++.+ .++
T Consensus        62 ~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~-~~~~-P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~  138 (147)
T d1qora1          62 TEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADK-AAIL-PAAIKVDVAEQQKYPLKDAQRAHEILE-SRA  138 (147)
T ss_dssp             SCEEEEEEEECTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGG-EEEC-CTTSCCCCCGGGEEEGGGHHHHHHHHH-TTC
T ss_pred             cccccceeeeeeecccccccceeeeeccccccceeEEEEehHH-eEEc-CcccchHHHHHHHHHHHHHHHHHHHHH-hCC
Confidence            46788889999999999999999754    8999999999999 9999 99865554 356677777888888754 679


Q ss_pred             CCCcEEEE
Q 042426           79 KKGEYVYV   86 (270)
Q Consensus        79 ~~g~~vlI   86 (270)
                      ++|++|||
T Consensus       139 ~~G~~VLI  146 (147)
T d1qora1         139 TQGSSLLI  146 (147)
T ss_dssp             CCBCCEEE
T ss_pred             CCCCEEEe
Confidence            99999998

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.47  E-value=6.4e-14  Score=102.86  Aligned_cols=76  Identities=16%  Similarity=0.028  Sum_probs=65.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|.++|+++++|++||||+..                              |+|+||+++++++ ++++ |++  +
T Consensus        64 E~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~--~  139 (171)
T d1h2ba1          64 ENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRS-VIKL-PKD--V  139 (171)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGG-EEEC-CTT--C
T ss_pred             eeeeeeecccCCCCcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhc-ceec-CCC--C
Confidence            4466777899999999999999642                              6899999999999 9999 999  5


Q ss_pred             ccc-ccccCchhhhHHHHhhhhcCCCCCcEEEE
Q 042426           55 PYY-TGILGMPGLTAYGGLHELCSPKKGEYVYV   86 (270)
Q Consensus        55 ~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI   86 (270)
                      +++ ++++.+++.|+|+++ +.+.+ .|++|||
T Consensus       140 ~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         140 RVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             CCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             CHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence            554 788889999999999 45777 8999998

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.44  E-value=8.9e-14  Score=104.67  Aligned_cols=80  Identities=18%  Similarity=0.209  Sum_probs=69.4

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE   33 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~   33 (270)
                      +++|+|.++|+++++|++||||...                                                   |+|+
T Consensus        69 E~~G~v~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfa  148 (199)
T d1cdoa1          69 EGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFS  148 (199)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSB
T ss_pred             ccceEEEEEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCce
Confidence            4567777899999999999999431                                                   6899


Q ss_pred             eeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEe
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVS   87 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~   87 (270)
                      ||+++++++ ++++ |++++.+ ++|++.+++.|++.++....+.+.|++|||+
T Consensus       149 ey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         149 QYTVVNQIA-VAKI-DPSVKLD-EFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             SEEEEEGGG-EEEC-CTTSCCG-GGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             EEEEEchHH-EEEC-CCCCCHH-HHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            999999999 9999 9994443 6899999999999999888889999999984

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.44  E-value=1.1e-13  Score=99.53  Aligned_cols=82  Identities=17%  Similarity=0.228  Sum_probs=69.6

Q ss_pred             CCcccceEEEEe-ecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHH
Q 042426            2 QPLSGYGVSKVL-DSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGG   71 (270)
Q Consensus         2 ~~i~g~g~v~~v-G~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~   71 (270)
                      |.++|++.++++ .++++.|++||+|++.         |+|+||+++++++ ++++ |++  ++.++|+++++++|+|.+
T Consensus        61 p~v~g~e~~G~v~~~~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~-~~~i-P~~--l~~~aa~l~~a~~ta~~~  136 (152)
T d1xa0a1          61 PFVPGIDLAGVVVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEW-LVPL-PKG--LERIAQEISLAELPQALK  136 (152)
T ss_dssp             SBCCCSEEEEEEEECCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGG-CEEC-CTT--HHHHEEEEEGGGHHHHHH
T ss_pred             cceeeeeeeeeeeccCCCccccCCEEEEecCccccccCCCcceeeeehhhc-cccC-CCC--CCHHHHHHHHHHHHHHHH
Confidence            456677776653 5677899999999865         7999999999999 9999 999  665788999999999998


Q ss_pred             hhhhcCCCCCcEEEEec
Q 042426           72 LHELCSPKKGEYVYVSA   88 (270)
Q Consensus        72 l~~~~~~~~g~~vlI~g   88 (270)
                      +...++++ |++|||+|
T Consensus       137 ~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         137 RILRGELR-GRTVVRLA  152 (152)
T ss_dssp             HHHHTCCC-SEEEEECC
T ss_pred             HHHhcCCC-CCEEEEcC
Confidence            88888886 99999975

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.39  E-value=6.7e-16  Score=114.45  Aligned_cols=91  Identities=16%  Similarity=0.122  Sum_probs=76.9

Q ss_pred             cccceEEEEeecCCCCCCCCCEEEec----ccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhh-hcCC
Q 042426            4 LSGYGVSKVLDSTHPNYKKDDLVWGL----TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHE-LCSP   78 (270)
Q Consensus         4 i~g~g~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~-~~~~   78 (270)
                      .+++|+|.++|.+++.++.||+|+..    |+|+||+++++++ ++++ |++  ++ ..+++++..+|||+++.. .+++
T Consensus        78 ~e~~g~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~-~~~i-P~~--~~-~~~a~~~~~~ta~~~l~~~~~~~  152 (175)
T d1gu7a1          78 NEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDD-FIKL-PNP--AQ-SKANGKPNGLTDAKSIETLYDGT  152 (175)
T ss_dssp             SCCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGG-EEEE-CCH--HH-HHHTTCSCCCCCCCCEEEECCSS
T ss_pred             cccccccccccccccccccccceeccccccccccceeeehhhh-ccCC-Ccc--ch-hhhhccchHHHHHHHHHHHhcCC
Confidence            46788899999999999999999876    8999999999999 9999 988  66 344455677889988754 4689


Q ss_pred             CCCcEEEEec-CCchHHHHHHH
Q 042426           79 KKGEYVYVSA-ASGAVGQLVGQ   99 (270)
Q Consensus        79 ~~g~~vlI~g-a~g~vG~~ai~   99 (270)
                      ++|++++|+| |+|++|++++|
T Consensus       153 ~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         153 KPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             SCHHHHHHHHHHTGGGSCEEEE
T ss_pred             CCCCEEEEECccchhhhheEEe
Confidence            9999999998 56889998876

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.35  E-value=1.4e-12  Score=96.10  Aligned_cols=77  Identities=13%  Similarity=-0.007  Sum_probs=63.2

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|+++|+++++|++||||+..                               |+|+||+++++++ ++++ |++  
T Consensus        67 E~~G~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~-~~~i-Pd~--  142 (175)
T d1llua1          67 EGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNY-VGIL-PKN--  142 (175)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTT-SEEC-CTT--
T ss_pred             cceEEEEEeCCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHH-EEEC-CCC--
Confidence            5567788899999999999999631                               5899999999999 9999 999  


Q ss_pred             cccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEe
Q 042426           54 LPYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVS   87 (270)
Q Consensus        54 ~~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~   87 (270)
                      ++++ ++++..++.|++..+ +.+ ..+|++|||+
T Consensus       143 l~~~~a~~~~~~~~t~~~~~-~~g-~~~G~~VLVl  175 (175)
T d1llua1         143 VKATIHPGKLDDINQILDQM-RAG-QIEGRIVLEM  175 (175)
T ss_dssp             CCCCEEEECGGGHHHHHHHH-HTT-CCSSEEEEEC
T ss_pred             CChhHHHHHHhHHHHHHHHH-HhC-CCCCCEEEeC
Confidence            5544 777888889998887 334 4469999985

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.32  E-value=2e-12  Score=94.97  Aligned_cols=78  Identities=14%  Similarity=0.094  Sum_probs=61.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      +++|+|+++|++++.+++||+|+..                               |+|+||+++++++ ++++ |++  
T Consensus        62 E~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~--  137 (171)
T d1rjwa1          62 EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADY-VVKI-PDN--  137 (171)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-CEEC-CTT--
T ss_pred             EEEEEEEEecccccCceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHH-EEEC-CCC--
Confidence            5677788899999999999999521                               6899999999999 9999 999  


Q ss_pred             ccccccccCchhhhHHHHhhhhcCCCCCcEEEEecC
Q 042426           54 LPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAA   89 (270)
Q Consensus        54 ~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga   89 (270)
                      +++++|+|. ...++++.+. .+.+ +|++|||+|-
T Consensus       138 ~~~e~A~l~-~~~~~~~~~~-~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         138 TIIEVQPLE-KINEVFDRML-KGQI-NGRVVLTLED  170 (171)
T ss_dssp             CCEEEEEGG-GHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred             CCHHHHHHH-HHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence            666666664 4456666663 3555 5999999983

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.32  E-value=1e-12  Score=97.91  Aligned_cols=78  Identities=13%  Similarity=0.040  Sum_probs=63.1

Q ss_pred             ccceEEEEeecCC-CCCCCCCEEE-----------------------------------ec---ccceeeEeecCCccce
Q 042426            5 SGYGVSKVLDSTH-PNYKKDDLVW-----------------------------------GL---TSWEEFSLIQSPQLLI   45 (270)
Q Consensus         5 ~g~g~v~~vG~~v-~~~~~Gd~V~-----------------------------------~~---g~~~~~~~v~~~~~~~   45 (270)
                      |++|+|+++|+++ +.+++||||.                                   ++   |+|+||+++++++ ++
T Consensus        69 E~~G~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~-~~  147 (192)
T d1piwa1          69 EIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHF-VV  147 (192)
T ss_dssp             CEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGG-EE
T ss_pred             ccccchhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHH-eE
Confidence            3455777889988 6699999994                                   11   6899999999999 99


Q ss_pred             eccCCCCCccccccccCch-hhhHHHHhhhhcCCCCCcEEEEe
Q 042426           46 KILDTSVPLPYYTGILGMP-GLTAYGGLHELCSPKKGEYVYVS   87 (270)
Q Consensus        46 ~~~p~~~~~~~~~a~l~~~-~~ta~~~l~~~~~~~~g~~vlI~   87 (270)
                      ++ |++  ++.+.|++.++ +.|||+++ +.+++++|++|++.
T Consensus       148 ~i-P~~--l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         148 PI-PEN--IWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             EC-CTT--CCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             EC-CCC--CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence            99 999  56565666665 67999999 57899999999986

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.32  E-value=1.2e-12  Score=91.24  Aligned_cols=72  Identities=15%  Similarity=0.083  Sum_probs=62.9

Q ss_pred             CCcccceEEEEeecCCCCCCCCCEEEec---ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHHHhhhhcC
Q 042426            2 QPLSGYGVSKVLDSTHPNYKKDDLVWGL---TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYGGLHELCS   77 (270)
Q Consensus         2 ~~i~g~g~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~~l~~~~~   77 (270)
                      |.++|++.+++|        +||+|+++   |+|+||+++++++ ++++ |++  +++ ++|++++.+.|||+++.+.+ 
T Consensus        56 P~v~G~E~~G~V--------vGd~V~~~~~~G~~aey~~v~~~~-~~~~-P~~--~~~~~aa~~~~~~~Ta~~al~~~g-  122 (131)
T d1iz0a1          56 PFIPGMEVVGVV--------EGRRYAALVPQGGLAERVAVPKGA-LLPL-PEG--RPVVGPVFPFAEAEAAFRALLDRG-  122 (131)
T ss_dssp             SBCCCCEEEEEE--------TTEEEEEECSSCCSBSEEEEEGGG-CEEC-CTT--CCCEEEEEEGGGHHHHHHHTTCTT-
T ss_pred             eeEeeeeeEEee--------ccceEEEEeccCccceeeeeCHHH-eEEc-cCC--CCHHHHHHHHHHHHHHHHHHHhcc-
Confidence            678899999888        59999988   8999999999999 9999 999  555 58999999999999997766 


Q ss_pred             CCCCcEEEEe
Q 042426           78 PKKGEYVYVS   87 (270)
Q Consensus        78 ~~~g~~vlI~   87 (270)
                       +.|++||++
T Consensus       123 -~~g~tvl~l  131 (131)
T d1iz0a1         123 -HTGKVVVRL  131 (131)
T ss_dssp             -CCBEEEEEC
T ss_pred             -cCCCEEEEC
Confidence             458998874

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.5e-12  Score=96.68  Aligned_cols=77  Identities=16%  Similarity=0.066  Sum_probs=60.1

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec-------------------------------ccceeeEeecCCccceeccCCCCC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL-------------------------------TSWEEFSLIQSPQLLIKILDTSVP   53 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~~p~~~~   53 (270)
                      |++|+|.++|+++++|++||+|+..                               |+|+||+++++++ ++++ |++  
T Consensus        70 E~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~-~~~l-P~~--  145 (185)
T d1pl8a1          70 EASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF-CYKL-PDN--  145 (185)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTT--
T ss_pred             eeeeeEEEeccceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHH-EEEC-CCC--
Confidence            4556677789999999999999631                               5799999999999 9999 999  


Q ss_pred             cccc-ccccCchhhhHHHHhhhhcCCCCCcEEEEec
Q 042426           54 LPYY-TGILGMPGLTAYGGLHELCSPKKGEYVYVSA   88 (270)
Q Consensus        54 ~~~~-~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~g   88 (270)
                      ++.+ ++++  ++.+|++++ +..+.++|++|+|..
T Consensus       146 ~~~~~aa~~--pl~~a~~a~-~~~~~~~G~~VlIg~  178 (185)
T d1pl8a1         146 VKPLVTHRF--PLEKALEAF-ETFKKGLGLKIMLKC  178 (185)
T ss_dssp             CGGGEEEEE--EGGGHHHHH-HHHHTTCCSEEEEEC
T ss_pred             CCHHHHHHH--HHHHHHHHH-HHhCCCCCCEEEEEe
Confidence            5554 4433  456677777 456788999999943

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.27  E-value=3.3e-12  Score=95.66  Aligned_cols=80  Identities=16%  Similarity=0.145  Sum_probs=66.7

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec---------------------------------------------------ccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL---------------------------------------------------TSWE   33 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~   33 (270)
                      +++|+|.++|++|+.+++||+|...                                                   |+|+
T Consensus        67 E~~G~V~~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfA  146 (197)
T d2fzwa1          67 LGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFS  146 (197)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSB
T ss_pred             ceeeEEEeecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccce
Confidence            4566778899999999999999531                                                   6899


Q ss_pred             eeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEe
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVS   87 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~   87 (270)
                      ||+++++.+ ++++ |++++.+ ++|++++++.|++.++..+..-+.+++|+|+
T Consensus       147 ey~vvp~~~-~~~v-p~~l~~~-~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         147 EYTVVADIS-VAKI-DPLIKVD-EFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             SEEEEEGGG-EEEC-CTTSCSG-GGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             eEEEechHH-EEEC-CCCCCHH-HHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            999999999 9999 9884443 5889999999999998766666788899884

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.19  E-value=2.4e-14  Score=107.71  Aligned_cols=96  Identities=18%  Similarity=0.017  Sum_probs=72.6

Q ss_pred             CCccc---ceEEEEeecCCCCCCCCCEEEe----------------------------------------cccceeeEee
Q 042426            2 QPLSG---YGVSKVLDSTHPNYKKDDLVWG----------------------------------------LTSWEEFSLI   38 (270)
Q Consensus         2 ~~i~g---~g~v~~vG~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v   38 (270)
                      |.+.|   +|+|+++|++|++|++||||..                                        .|+|+||+++
T Consensus        61 P~v~GHE~~G~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~v  140 (201)
T d1kola1          61 GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLV  140 (201)
T ss_dssp             TCBCCCCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEE
T ss_pred             ceeccceeeeeeeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEe
Confidence            55666   6777789999999999999941                                        0689999999


Q ss_pred             cC--CccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC
Q 042426           39 QS--PQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC  106 (270)
Q Consensus        39 ~~--~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~  106 (270)
                      |.  .+ ++++ |++. ++.+++++..++.++++++. ..+.+.++    +|+ |++|++++|.||.+|+
T Consensus       141 p~~~~~-l~~i-Pd~~-~~~~~~~~~~~~~~~~~a~~-~~~~~~g~----~g~-G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         141 PYADFN-LLKL-PDRD-KAMEKINIAEVVGVQVISLD-DAPRGYGE----FDA-GVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             SSHHHH-CEEC-SCHH-HHHHTCCHHHHHTEEEECGG-GHHHHHHH----HHH-TCSCEEEECTTCSSCC
T ss_pred             ehHHCe-EEEC-CCCC-ChHHHHHHHHHHHHHHHHHH-hCCCCCeE----Eee-CHHHHHHHHHHHHcCC
Confidence            85  35 9999 9862 33357778778888887774 34444443    465 9999999999998885

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.15  E-value=4.1e-11  Score=89.26  Aligned_cols=81  Identities=15%  Similarity=0.189  Sum_probs=57.4

Q ss_pred             CCcccc---eEEEEeecCCCCCCCCCEEEec-------------------------------------------------
Q 042426            2 QPLSGY---GVSKVLDSTHPNYKKDDLVWGL-------------------------------------------------   29 (270)
Q Consensus         2 ~~i~g~---g~v~~vG~~v~~~~~Gd~V~~~-------------------------------------------------   29 (270)
                      |.|+|+   |+|.++|++|++|++||||...                                                 
T Consensus        57 P~i~GHE~~G~V~~vG~~v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~  136 (194)
T d1f8fa1          57 PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHF  136 (194)
T ss_dssp             SBCCCCEEEEEEEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCG
T ss_pred             CcccccceEEEeeecCccceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeecccc
Confidence            555555   5566789999999999999531                                                 


Q ss_pred             ---ccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC
Q 042426           30 ---TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC  106 (270)
Q Consensus        30 ---g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~  106 (270)
                         |+|+||+++++.+ ++++ |++  ++.                        ++.+++.| .|++|++++|+++.+|+
T Consensus       137 ~~~g~fae~~~v~~~~-~~~i-p~~--i~~------------------------~~~~~i~g-~g~~g~~aiq~a~~~g~  187 (194)
T d1f8fa1         137 FAQSSFATYALSRENN-TVKV-TKD--FPF------------------------DQLVKFYA-FDEINQAAIDSRKGITL  187 (194)
T ss_dssp             GGTCCSBSEEEEEGGG-EEEE-CTT--CCG------------------------GGGEEEEE-GGGHHHHHHHHHHTSCS
T ss_pred             ccccccceeEEEehHH-EEEC-CCC--CCc------------------------ccEEEEeC-cHHHHHHHHHHHHHcCC
Confidence               3566777777777 7777 666  221                        23345555 49999999999999999


Q ss_pred             EEEEE
Q 042426          107 YVVGS  111 (270)
Q Consensus       107 ~v~~~  111 (270)
                      +.++.
T Consensus       188 ~~iia  192 (194)
T d1f8fa1         188 KPIIK  192 (194)
T ss_dssp             EEEEE
T ss_pred             CEEEE
Confidence            54443

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.14  E-value=1.2e-10  Score=82.34  Aligned_cols=81  Identities=19%  Similarity=0.285  Sum_probs=63.5

Q ss_pred             CCcccceEEEEeecCCCCCCCCCEEEecccceeeEeecCCccceeccCCCCC---ccc-cccccCchhhhHHH-Hhhhhc
Q 042426            2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVP---LPY-YTGILGMPGLTAYG-GLHELC   76 (270)
Q Consensus         2 ~~i~g~g~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~~p~~~~---~~~-~~a~l~~~~~ta~~-~l~~~~   76 (270)
                      .+|+|.|+...++|++++|++||+|++.++|+||.+++++. +.++ |+..+   ... ..+++...++||++ .+.  .
T Consensus        61 ~~~~g~~vg~Vv~S~~~~f~~GD~V~g~~gw~ey~v~~~~~-l~kv-~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~  136 (147)
T d1v3va1          61 AVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKG-LEKL-LTEWPDKKIQYHEHVTKGFENMPAAFIEML--N  136 (147)
T ss_dssp             SBCCCCEEEEEEEESCTTSCTTCEEEECCCSBSEEEECSSS-CEEC-CTTCCTTSSCCCEEEEECGGGHHHHHHHHH--T
T ss_pred             CccccceEEEEEEeCCCcccCCCEEEEccCCEeEEEeccce-eeEc-cccccccccchhhhHhccccchHHHHHHhh--C
Confidence            35888888888899999999999999999999999999999 9999 64432   222 46678888888544 554  4


Q ss_pred             CCCCCcEEEE
Q 042426           77 SPKKGEYVYV   86 (270)
Q Consensus        77 ~~~~g~~vlI   86 (270)
                      ..+.|++|++
T Consensus       137 ~~k~Getvv~  146 (147)
T d1v3va1         137 GANLGKAVVT  146 (147)
T ss_dssp             TCCSSEEEEE
T ss_pred             CCCCCCEEEe
Confidence            4567999986

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.13  E-value=2e-11  Score=91.87  Aligned_cols=81  Identities=16%  Similarity=0.279  Sum_probs=63.9

Q ss_pred             CCcccc---eEEEEeecCCCCCCCCCEEEec-------------------------------------------------
Q 042426            2 QPLSGY---GVSKVLDSTHPNYKKDDLVWGL-------------------------------------------------   29 (270)
Q Consensus         2 ~~i~g~---g~v~~vG~~v~~~~~Gd~V~~~-------------------------------------------------   29 (270)
                      |.++|+   |+|.++|++|++|++||+|+..                                                 
T Consensus        62 P~v~GHE~~G~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v  141 (202)
T d1e3ia1          62 PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSI  141 (202)
T ss_dssp             SBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEE
T ss_pred             ccccccccceEEeeecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceee
Confidence            445554   5666789999999999999541                                                 


Q ss_pred             ------ccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEec
Q 042426           30 ------TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSA   88 (270)
Q Consensus        30 ------g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~g   88 (270)
                            |+|+||+++++.+ ++++ |++++.+ .++++.+++.+++.++..   +++|++|.|+.
T Consensus       142 ~~~~~~G~faey~~v~~~~-l~~l-P~~~~~~-~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~  200 (202)
T d1e3ia1         142 YHFMGVSSFSQYTVVSEAN-LARV-DDEFDLD-LLVTHALPFESINDAIDL---MKEGKSIRTIL  200 (202)
T ss_dssp             BCCTTTCCSBSEEEEEGGG-EEEC-CTTSCGG-GGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred             ecccccCCceEEEEEehhh-EEEC-CCCCCHH-HHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence                  6899999999999 9999 9994433 478888888998888843   46889887763

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.12  E-value=4.6e-13  Score=97.37  Aligned_cols=87  Identities=14%  Similarity=0.171  Sum_probs=69.4

Q ss_pred             CCcccceEEEEe-ecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhHHH
Q 042426            2 QPLSGYGVSKVL-DSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTAYG   70 (270)
Q Consensus         2 ~~i~g~g~v~~v-G~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta~~   70 (270)
                      |.++|++.++.+ .+.++++++||+|+..         |+|+||+++++++ ++++ |++  +++ +||+++..++|||.
T Consensus        61 ~~~~g~e~~G~v~~~~~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~-l~~i-P~~--ls~~~Aa~~~~~~~ta~~  136 (162)
T d1tt7a1          61 PLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDW-LVPL-PQN--LSLKEAMVDQLLTIVDRE  136 (162)
T ss_dssp             SEECCSEEEEEEEECSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGG-EEEC-CTT--CCHHHHHHSCSTTSEEEE
T ss_pred             eeeeeeecccccccccccccccceeeEeeeccceeccccccceEEEecHHH-EEEC-CCC--CCHHHHHHHHHHHHHHHH
Confidence            346666666654 4678899999999764         8999999999999 9999 999  666 49999999999998


Q ss_pred             HhhhhcCCCCCcEEEEecCCchH
Q 042426           71 GLHELCSPKKGEYVYVSAASGAV   93 (270)
Q Consensus        71 ~l~~~~~~~~g~~vlI~ga~g~v   93 (270)
                      ++.. .+...+++|||+|++|++
T Consensus       137 ~~~~-~~~~~~~~Vli~ga~G~v  158 (162)
T d1tt7a1         137 VSLE-ETPGALKDILQNRIQGRV  158 (162)
T ss_dssp             ECST-THHHHHHHTTTTCCSSEE
T ss_pred             HHHh-cCCCCCCEEEEECCcceE
Confidence            7643 345556789999987764

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.11  E-value=1.1e-10  Score=85.87  Aligned_cols=77  Identities=19%  Similarity=0.177  Sum_probs=56.9

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEec------------------------------ccceeeEeecCCccceeccCCCCCc
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWGL------------------------------TSWEEFSLIQSPQLLIKILDTSVPL   54 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~~p~~~~~   54 (270)
                      +++|+|.++|+++++|++||+|+..                              |+|+||+++++.+.++++ |+.  .
T Consensus        69 E~~G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~-~~~--~  145 (177)
T d1jvba1          69 EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRV--K  145 (177)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSS--C
T ss_pred             eEEEEEeeeccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEEC-CCC--C
Confidence            3446667789999999999999642                              689999999876625665 665  4


Q ss_pred             cccccc-cCchhhhHHHHhhhhcCCCCCcEEEE
Q 042426           55 PYYTGI-LGMPGLTAYGGLHELCSPKKGEYVYV   86 (270)
Q Consensus        55 ~~~~a~-l~~~~~ta~~~l~~~~~~~~g~~vlI   86 (270)
                      +.++|+ +..++.++++++ +..++ .|++|||
T Consensus       146 ~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         146 PMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             CCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence            334444 456888999998 45555 5899987

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.95  E-value=1.1e-09  Score=77.44  Aligned_cols=66  Identities=11%  Similarity=0.100  Sum_probs=51.8

Q ss_pred             CCccc---ceEEEEeecCCCCCCCCCEEEec---------ccceeeEeecCCccceeccCCCCCccc-cccccCchhhhH
Q 042426            2 QPLSG---YGVSKVLDSTHPNYKKDDLVWGL---------TSWEEFSLIQSPQLLIKILDTSVPLPY-YTGILGMPGLTA   68 (270)
Q Consensus         2 ~~i~g---~g~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~~p~~~~~~~-~~a~l~~~~~ta   68 (270)
                      |.|+|   +|+|.++  +.+.+++||+|+..         |+|+||+++++++ ++++ |++  +++ ++|+++++++||
T Consensus        58 p~v~G~e~~G~V~~~--~~~~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~-vv~l-P~~--ls~~eAA~l~~a~~tA  131 (146)
T d1o89a1          58 PMIPGIDFAGTVRTS--EDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDW-LVAM-PQG--QAAKEISLSEAPNFAE  131 (146)
T ss_dssp             SBCCCSEEEEEEEEE--CSTTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGG-CEEC-CTT--SCCEEECGGGHHHHHH
T ss_pred             ceeccccccccceee--ccCCccceeeEEeecccceecCCCcceeeeeeeeee-EEEC-CCC--CCHHHHHHHHHHHHHH
Confidence            44555   4555554  44689999999853         8999999999999 9999 999  666 599999998898


Q ss_pred             HHHhh
Q 042426           69 YGGLH   73 (270)
Q Consensus        69 ~~~l~   73 (270)
                      +.++.
T Consensus       132 ~~~~~  136 (146)
T d1o89a1         132 AIINN  136 (146)
T ss_dssp             HHHTT
T ss_pred             HHHHH
Confidence            76653

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=98.87  E-value=1.3e-09  Score=80.17  Aligned_cols=77  Identities=16%  Similarity=0.199  Sum_probs=57.9

Q ss_pred             CCcccc---eEEEEeecCCC-----CCCCCCEEEe---------------------------------------ccccee
Q 042426            2 QPLSGY---GVSKVLDSTHP-----NYKKDDLVWG---------------------------------------LTSWEE   34 (270)
Q Consensus         2 ~~i~g~---g~v~~vG~~v~-----~~~~Gd~V~~---------------------------------------~g~~~~   34 (270)
                      |.|.|+   |+|.++|++|+     .+++||+|+.                                       .|+|+|
T Consensus        59 P~vlGHE~~G~V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae  138 (184)
T d1vj0a1          59 PIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSS  138 (184)
T ss_dssp             SBCCCCEEEEEEEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBS
T ss_pred             ccccceeeeeeeeEEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcC
Confidence            556655   55677899886     4689999952                                       168999


Q ss_pred             eEeec-CCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEec
Q 042426           35 FSLIQ-SPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSA   88 (270)
Q Consensus        35 ~~~v~-~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~g   88 (270)
                      |++++ +++ ++++ |++  ++++     .++++|+.++ +.+++++|++|+|+-
T Consensus       139 ~~~v~~~~~-v~~i-p~~--l~~~-----~pl~~A~~a~-~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         139 HIVLDPETD-VLKV-SEK--ITHR-----LPLKEANKAL-ELMESREALKVILYP  183 (184)
T ss_dssp             EEEECTTCC-EEEE-CTT--CCEE-----EEGGGHHHHH-HHHHHTSCSCEEEEC
T ss_pred             cEEechhHc-EEEC-CCC--CCHH-----HHHHHHHHHH-HHhCCCcCCEEEEee
Confidence            99996 567 9999 998  5543     2456778888 567899999999973

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=98.73  E-value=5.6e-09  Score=77.87  Aligned_cols=77  Identities=14%  Similarity=0.192  Sum_probs=53.6

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe---------------------------------------------------cccce
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG---------------------------------------------------LTSWE   33 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~---------------------------------------------------~g~~~   33 (270)
                      |++|+|.++|++++++++||+|..                                                   .|+|+
T Consensus        68 E~~G~Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fA  147 (198)
T d2jhfa1          68 EAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFS  147 (198)
T ss_dssp             SEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSB
T ss_pred             ceeEEEEecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCccc
Confidence            455667778999999999999942                                                   15799


Q ss_pred             eeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEe
Q 042426           34 EFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVS   87 (270)
Q Consensus        34 ~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~   87 (270)
                      ||+++++.+ ++++ |+..+++ .+++...++.+.....   ..+++|++|+|+
T Consensus       148 Ey~~v~~~~-~~~~-p~~~~~e-~l~~~~~~~~~v~~g~---~~l~~G~~VaVi  195 (198)
T d2jhfa1         148 QYTVVDEIS-VAKI-DAAFALD-PLITHVLPFEKINEGF---DLLRSGESIRTI  195 (198)
T ss_dssp             SEEEEEGGG-EEEC-CTTSCCG-GGEEEEEEGGGHHHHH---HHHHTTCCSEEE
T ss_pred             CeEEeCHHH-eEEC-CCCCCHH-HHHHHHHHHHhhhhCC---ceeeCCCEEEEE
Confidence            999999999 9999 9885544 2333333333322222   236788888775

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=98.69  E-value=1.8e-08  Score=73.66  Aligned_cols=71  Identities=15%  Similarity=0.081  Sum_probs=50.5

Q ss_pred             CCcc---cceEEEEeecCCCCCCCCCEEEe---------------------------------------cccceeeEeec
Q 042426            2 QPLS---GYGVSKVLDSTHPNYKKDDLVWG---------------------------------------LTSWEEFSLIQ   39 (270)
Q Consensus         2 ~~i~---g~g~v~~vG~~v~~~~~Gd~V~~---------------------------------------~g~~~~~~~v~   39 (270)
                      |.|+   ++|+|+++|++|+++++||+|..                                       .|+|+||++++
T Consensus        55 P~i~GhE~~G~V~~vG~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~  134 (179)
T d1uufa1          55 PCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVH  134 (179)
T ss_dssp             SBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEE
T ss_pred             cccccccccccchhhccccccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEec
Confidence            4455   45666778999999999999941                                       16799999999


Q ss_pred             CCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCC
Q 042426           40 SPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPK   79 (270)
Q Consensus        40 ~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~   79 (270)
                      +++ ++++ |+.  ..  .+++..++.++++++. .+.++
T Consensus       135 ~~~-~~~i-p~~--~~--~~~~a~~l~~a~~a~~-~a~v~  167 (179)
T d1uufa1         135 ERY-VLRI-RVA--DI--EMIRADQINEAYERML-RGDVK  167 (179)
T ss_dssp             GGG-CEEC-CCC--CE--EEECGGGHHHHHHHHH-TTCSS
T ss_pred             hHH-EEEC-CCC--Cc--ChhHhchhHHHHHHHH-HhCcc
Confidence            999 9999 755  22  2223345667887773 45554

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.58  E-value=6.8e-07  Score=63.29  Aligned_cols=101  Identities=17%  Similarity=0.181  Sum_probs=78.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      .-+|+|+|+ |.+|+.++..|+.+|++|.+.+.+.++++.+++.++........+...+.+.+.+     +|+|+.++--
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~-----aDivI~aali  105 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAE-----ADLLIGAVLV  105 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHT-----CSEEEECCCC
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhcc-----CcEEEEeeec
Confidence            468999998 9999999999999999999999999999999855554322333333256666655     8999998742


Q ss_pred             -----c--hHHHHHHccccCCEEEEEcccccccc
Q 042426          161 -----K--MLDAVLLNMRICGHIAVCGMISQYNI  187 (270)
Q Consensus       161 -----~--~~~~~~~~l~~~G~~v~~g~~~~~~~  187 (270)
                           +  ..+..++.|+++..+|.+....+-.+
T Consensus       106 pG~~aP~lIt~~mv~~Mk~GSVIVDvaidqGG~~  139 (168)
T d1pjca1         106 PGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCV  139 (168)
T ss_dssp             TTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSB
T ss_pred             CCcccCeeecHHHHhhcCCCcEEEEeecCCCCcc
Confidence                 1  56899999999999999876554333

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=98.56  E-value=4.1e-08  Score=71.49  Aligned_cols=47  Identities=17%  Similarity=0.198  Sum_probs=38.3

Q ss_pred             ccceEEEEeecCCCCCCCCCEEEe----------------------------c-----ccceeeEeecC--CccceeccC
Q 042426            5 SGYGVSKVLDSTHPNYKKDDLVWG----------------------------L-----TSWEEFSLIQS--PQLLIKILD   49 (270)
Q Consensus         5 ~g~g~v~~vG~~v~~~~~Gd~V~~----------------------------~-----g~~~~~~~v~~--~~~~~~~~p   49 (270)
                      |++|+|+++|++|++|++||||..                            +     |+|+||++++.  .+ ++++ |
T Consensus        60 E~~G~V~~vG~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~-l~~i-P  137 (177)
T d1jqba1          60 EAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMN-LAIL-P  137 (177)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHH-CEEC-C
T ss_pred             eeeEEeeecccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCe-EEEC-C
Confidence            456667778999999999999952                            1     78999999986  36 8999 9


Q ss_pred             CCCC
Q 042426           50 TSVP   53 (270)
Q Consensus        50 ~~~~   53 (270)
                      ++++
T Consensus       138 ~~~~  141 (177)
T d1jqba1         138 KDVD  141 (177)
T ss_dssp             TTSC
T ss_pred             CCcc
Confidence            9843

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.55  E-value=2.6e-07  Score=70.87  Aligned_cols=105  Identities=22%  Similarity=0.342  Sum_probs=76.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      +|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++..   ...|..++++..+.+.+..  .|++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            4789999999999999999999999999999999999988888777653   2345555433433333332  2479999


Q ss_pred             EeCCCcc-----------h---------------HHHHHHccc--cCCEEEEEccccc
Q 042426          155 FENVGGK-----------M---------------LDAVLLNMR--ICGHIAVCGMISQ  184 (270)
Q Consensus       155 ~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  184 (270)
                      ++++|..           .               .+.++..|.  .+|+++.+++...
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  140 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG  140 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh
Confidence            9998731           0               244566663  3689999987654

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=98.48  E-value=1.6e-08  Score=75.25  Aligned_cols=81  Identities=17%  Similarity=0.210  Sum_probs=54.4

Q ss_pred             CCcccc---eEEEEeecCCCCCCCCCEEEec-------------------------------------------------
Q 042426            2 QPLSGY---GVSKVLDSTHPNYKKDDLVWGL-------------------------------------------------   29 (270)
Q Consensus         2 ~~i~g~---g~v~~vG~~v~~~~~Gd~V~~~-------------------------------------------------   29 (270)
                      |.+.|+   |+|+++|++++++++||+|...                                                 
T Consensus        62 P~i~GHE~~G~Vv~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  141 (198)
T d1p0fa1          62 PVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLM  141 (198)
T ss_dssp             SBCCCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCST
T ss_pred             ccccceeeeeeeeecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccC
Confidence            455554   5566789999999999999520                                                 


Q ss_pred             --ccceeeEeecCCccceeccCCCCCccccccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHH
Q 042426           30 --TSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQL   96 (270)
Q Consensus        30 --g~~~~~~~v~~~~~~~~~~p~~~~~~~~~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~   96 (270)
                        |+|+||+++++.. ++++ |++++.+. .++..+...          .+.++++++|.|+ |++|++
T Consensus       142 ~~g~faey~~v~~~~-~~ki-p~~~~~~~-~~~~~~~~~----------~v~~~~~vlv~G~-G~iGl~  196 (198)
T d1p0fa1         142 GTSTFTEYTVVADIA-VAKI-DPKINVNF-LVSTKLTLD----------QINKAFELLSSGQ-GVRSIM  196 (198)
T ss_dssp             TTCCSBSEEEEETTS-EEEE-CTTSCGGG-GEEEEECGG----------GHHHHHHHTTTSS-CSEEEE
T ss_pred             CCccceeeEEecHHH-EEEC-CCCCCHHH-HHHhhcchh----------hcCCCCEEEEECC-CcceEE
Confidence              4689999999999 9999 88854442 222222222          2334455778775 777653

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.44  E-value=1.9e-06  Score=66.27  Aligned_cols=105  Identities=17%  Similarity=0.176  Sum_probs=76.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce---eecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA---FNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---i~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      +|.+++|+||++++|.+.++.+...|++|+.+++++++.+.+.++++....   .|..+..+..+.+.+...  |++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            468999999999999999999999999999999999998888878876422   344444233333333221  368999


Q ss_pred             EeCCCcc-----------h---------------HHHHHHccc-cCCEEEEEccccc
Q 042426          155 FENVGGK-----------M---------------LDAVLLNMR-ICGHIAVCGMISQ  184 (270)
Q Consensus       155 ~d~~g~~-----------~---------------~~~~~~~l~-~~G~~v~~g~~~~  184 (270)
                      ++++|..           .               .+.++..|+ .+|+++.+++...
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            9999831           0               244555665 4699999987664

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.41  E-value=5.9e-07  Score=68.78  Aligned_cols=81  Identities=11%  Similarity=0.174  Sum_probs=62.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcC--CCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFP--EGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v~d  156 (270)
                      .|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.++++.. ...|..++++..+.+.+...  |++|++++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            3689999999999999999999999999999999999998888677764 33466665344433333222  36999999


Q ss_pred             CCCc
Q 042426          157 NVGG  160 (270)
Q Consensus       157 ~~g~  160 (270)
                      ++|.
T Consensus        84 nAG~   87 (242)
T d1ulsa_          84 YAGI   87 (242)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9883

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.40  E-value=2.4e-06  Score=65.55  Aligned_cols=104  Identities=15%  Similarity=0.148  Sum_probs=75.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcC--CCccEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFP--EGIDIYFE  156 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--~~~d~v~d  156 (270)
                      +|.++||+||++++|.+.++.+...|++|++..++++..+.++ +.+.. ...|..+.++..+.+.+...  |++|++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn   82 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN   82 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            5789999999999999999999999999999999988777766 77764 23455554233333333222  36999999


Q ss_pred             CCCcc-----------h---------------HHHHHHcccc--CCEEEEEccccc
Q 042426          157 NVGGK-----------M---------------LDAVLLNMRI--CGHIAVCGMISQ  184 (270)
Q Consensus       157 ~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  184 (270)
                      ++|..           .               .+.++..|.+  +|+++.+++...
T Consensus        83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~  138 (248)
T d2d1ya1          83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG  138 (248)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence            98831           1               2445566654  589999887664

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.39  E-value=1.5e-06  Score=63.98  Aligned_cols=78  Identities=21%  Similarity=0.193  Sum_probs=58.6

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-----CceeecCCchhHHHHHHhHcCCCcc
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF-----DDAFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~-----~~vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      --+|.+++|+||+|++|..+++.+...|++|++++|+.++.+.+.+++..     ....|..+.++..+.+     +++|
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~iD   94 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV-----KGAH   94 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT-----TTCS
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh-----cCcC
Confidence            34689999999999999999999999999999999999988777644432     1334555442333322     3589


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      ++|+++|.
T Consensus        95 ilin~Ag~  102 (191)
T d1luaa1          95 FVFTAGAI  102 (191)
T ss_dssp             EEEECCCT
T ss_pred             eeeecCcc
Confidence            99999874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.9e-06  Score=65.96  Aligned_cols=79  Identities=20%  Similarity=0.226  Sum_probs=61.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      .|.++||+||++++|.+.++.+...|++|+++++++++++.+.++++..  ...|..+.++..+.+.+ . |++|+++++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-~-g~iDilVnn   83 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGS-V-GPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT-C-CCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHH-h-CCceEEEec
Confidence            5789999999999999999999999999999999999988887666542  34566665233333332 2 369999999


Q ss_pred             CCc
Q 042426          158 VGG  160 (270)
Q Consensus       158 ~g~  160 (270)
                      +|.
T Consensus        84 Ag~   86 (244)
T d1pr9a_          84 AAV   86 (244)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            883

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.34  E-value=3.8e-06  Score=64.47  Aligned_cols=104  Identities=18%  Similarity=0.241  Sum_probs=72.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HhCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH----KFGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~----~~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      +|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+    +.|..   ...|..++++..+.+.+...  |+
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            36899999999999999999999999999999999887655432    44543   22355555333333333222  36


Q ss_pred             ccEEEeCCCcc--------------------------hHHHHHHcccc--CCEEEEEcccc
Q 042426          151 IDIYFENVGGK--------------------------MLDAVLLNMRI--CGHIAVCGMIS  183 (270)
Q Consensus       151 ~d~v~d~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~  183 (270)
                      +|++++++|..                          ..+.++..|..  +|+++.+++..
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~  144 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT  144 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccch
Confidence            99999999831                          02456666744  58999987654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.33  E-value=1.1e-06  Score=67.86  Aligned_cols=81  Identities=15%  Similarity=0.213  Sum_probs=62.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      +|.+++|+||++++|.+.++.+...|++|+++.+++++.+.+.+++|..   ...|..++++..+.+.+...  |++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            4789999999999999999999999999999999999988888788764   23455555344433333322  369999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      ++++|.
T Consensus        84 VnnAg~   89 (256)
T d1k2wa_          84 VNNAAL   89 (256)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            999983

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.33  E-value=1.1e-06  Score=67.21  Aligned_cols=105  Identities=18%  Similarity=0.182  Sum_probs=75.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      +|.+++|+||++++|.+.++.+...|++|+++.+++++.+.+.++++-.   ...|..++++..+.+.+...  +++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            4689999999999999999999999999999999999988887677642   22455554333333333322  369999


Q ss_pred             EeCCCcc-----------h---------------HHHHHHccc--cCCEEEEEccccc
Q 042426          155 FENVGGK-----------M---------------LDAVLLNMR--ICGHIAVCGMISQ  184 (270)
Q Consensus       155 ~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  184 (270)
                      ++++|..           .               .+.++..+.  .+|+++.+++...
T Consensus        85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  142 (244)
T d1nffa_          85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG  142 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccc
Confidence            9999841           0               133444443  3589999988665

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=3.1e-06  Score=65.21  Aligned_cols=81  Identities=26%  Similarity=0.427  Sum_probs=59.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-Cc----eeecCCchhHHHHHHhHcC--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF-DD----AFNYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~----vi~~~~~~~~~~~i~~~~~--~  149 (270)
                      +|.++||+||++++|.+.++.+...|++|+.+.+++++.+.+.+++   +. ..    ..|-.++++..+.+.+...  |
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4679999999999999999999999999999999998887765443   22 12    2355555344443333322  4


Q ss_pred             CccEEEeCCCc
Q 042426          150 GIDIYFENVGG  160 (270)
Q Consensus       150 ~~d~v~d~~g~  160 (270)
                      ++|++++++|.
T Consensus        89 ~iD~lVnnAg~   99 (257)
T d1xg5a_          89 GVDICINNAGL   99 (257)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            69999999984

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.30  E-value=1.3e-06  Score=67.33  Aligned_cols=105  Identities=16%  Similarity=0.168  Sum_probs=75.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      +|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++..   ...|..++++..+.+.+...  |++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            4789999999999999999999999999999999999888887677643   23455554344333333221  369999


Q ss_pred             EeCCCcc-----------h---------------HHHHHHccc--cCCEEEEEccccc
Q 042426          155 FENVGGK-----------M---------------LDAVLLNMR--ICGHIAVCGMISQ  184 (270)
Q Consensus       155 ~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  184 (270)
                      ++++|..           .               .+.++..+.  .+|+++.+++...
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~  141 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG  141 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchh
Confidence            9999831           0               233444443  3699999987665

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=9e-07  Score=69.11  Aligned_cols=102  Identities=18%  Similarity=0.276  Sum_probs=69.7

Q ss_pred             CcEE-EEecCCchHHHHHHHH-HHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhH---HHHHHhHcCC
Q 042426           81 GEYV-YVSAASGAVGQLVGQF-VKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDL---DAALNRCFPE  149 (270)
Q Consensus        81 g~~v-lI~ga~g~vG~~ai~l-a~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~---~~~i~~~~~~  149 (270)
                      |.+| ||+||++|+|+++++. ++..|++|++++|++++.+.+.+++   +..   ...|..+.++.   .+.+.+.. +
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-G   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-C
Confidence            4555 8999999999988764 5566899999999999887766454   322   22455554233   33333332 3


Q ss_pred             CccEEEeCCCcc--------------------------hHHHHHHccccCCEEEEEcccc
Q 042426          150 GIDIYFENVGGK--------------------------MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       150 ~~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      ++|++++++|..                          ..+..+..|+++|+++.+++..
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~  140 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIM  140 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence            699999999831                          1244566778889999987643

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.29  E-value=1.2e-06  Score=68.30  Aligned_cols=80  Identities=24%  Similarity=0.316  Sum_probs=60.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      +|.++||+||++++|.+.++.+...|++|+++.+++++++.+.++++..   ...|..+.++..+.+.+...  +++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            4789999999999999999999999999999999999988887677753   22355554233333333222  369999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++++|
T Consensus        84 vnnAG   88 (276)
T d1bdba_          84 IPNAG   88 (276)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99987

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=1.7e-06  Score=66.50  Aligned_cols=105  Identities=15%  Similarity=0.164  Sum_probs=75.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcC--CCccEEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFP--EGIDIYF  155 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--~~~d~v~  155 (270)
                      .|.++||+||++++|.+.++.+...|++|++..+++++.+.+.++++..  ...|.++.++..+.+.+...  |++|+++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            4789999999999999999999999999999999999998888565542  22455554344433333322  3699999


Q ss_pred             eCCCcc----h-----------------------HHHHHHcccc-CCEEEEEccccc
Q 042426          156 ENVGGK----M-----------------------LDAVLLNMRI-CGHIAVCGMISQ  184 (270)
Q Consensus       156 d~~g~~----~-----------------------~~~~~~~l~~-~G~~v~~g~~~~  184 (270)
                      +++|..    .                       .+.++..|+. +|+++.+++...
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~  141 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG  141 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHH
T ss_pred             ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccc
Confidence            999831    0                       2445555654 589999887654

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.28  E-value=2.9e-06  Score=64.77  Aligned_cols=78  Identities=17%  Similarity=0.169  Sum_probs=59.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      .|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++.+..  ...|..+.++..+.+.+.  |++|+++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDilVnn   81 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI--GPVDLLVNN   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC--CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHc--CCCeEEEEC
Confidence            4789999999999999999999999999999999999888877566432  234556552333333322  479999999


Q ss_pred             CC
Q 042426          158 VG  159 (270)
Q Consensus       158 ~g  159 (270)
                      +|
T Consensus        82 Ag   83 (242)
T d1cyda_          82 AA   83 (242)
T ss_dssp             CC
T ss_pred             Cc
Confidence            88

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=98.27  E-value=2.4e-06  Score=66.32  Aligned_cols=80  Identities=16%  Similarity=0.310  Sum_probs=60.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-----ceeecCCchhHHHHHHhHcC--CCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-----DAFNYKEEPDLDAALNRCFP--EGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~~--~~~d  152 (270)
                      .|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++..     ...|..++++....+.+...  |.+|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            4789999999999999999999999999999999999988887677652     12355554344333333221  3699


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      ++++++|
T Consensus        85 ~lVnnAG   91 (268)
T d2bgka1          85 IMFGNVG   91 (268)
T ss_dssp             EEEECCC
T ss_pred             eeccccc
Confidence            9999987

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.23  E-value=3.6e-06  Score=64.64  Aligned_cols=104  Identities=16%  Similarity=0.278  Sum_probs=72.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      +..+||+||++++|.+.++.+...|++|+++.+++++.+.+.+++   |..   ...|..++++..+.+.+..  .|++|
T Consensus        10 nKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iD   89 (251)
T d2c07a1          10 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVD   89 (251)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCce
Confidence            578999999999999999999999999999999998877666444   332   2345555433333333321  24799


Q ss_pred             EEEeCCCcc-----------h---------------HHHHHHccc--cCCEEEEEccccc
Q 042426          153 IYFENVGGK-----------M---------------LDAVLLNMR--ICGHIAVCGMISQ  184 (270)
Q Consensus       153 ~v~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  184 (270)
                      +++++.|..           .               .+.++..+.  .+|+++.+++...
T Consensus        90 ilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~  149 (251)
T d2c07a1          90 ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVG  149 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             eeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHh
Confidence            999998831           0               233444443  4599999987554

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.23  E-value=2.6e-06  Score=64.99  Aligned_cols=104  Identities=11%  Similarity=0.146  Sum_probs=75.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeecCCchhHHHHHHhHcC--CCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD---AFNYKEEPDLDAALNRCFP--EGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--~~~d~v  154 (270)
                      .|.+++|+||++++|.+.++-+...|++|+++.++.++.+.+.++++...   ..|.+++++..+.+.+...  |++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            47899999999999999999999999999999999998888877887542   2355555344444443322  369999


Q ss_pred             EeCCCcc-----------h---------------HHHHHHccccCCEEEEEcccc
Q 042426          155 FENVGGK-----------M---------------LDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       155 ~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      ++++|..           .               .+..+..+..++.++.++...
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a  138 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA  138 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred             ccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc
Confidence            9988732           0               244556677777777665543

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=98.23  E-value=2.9e-06  Score=65.17  Aligned_cols=81  Identities=11%  Similarity=0.122  Sum_probs=60.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-----ceeecCCchhHHHHHHhHcC--CCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-----DAFNYKEEPDLDAALNRCFP--EGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~~--~~~d  152 (270)
                      +|.++||+||++++|.+.++.+...|++|+++.+++++.+.+.++++..     ...|..++++..+.+.+...  |++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            4789999999999999999999999999999999999888887676542     12355554233333332211  4699


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      ++++++|.
T Consensus        85 iLVnnAg~   92 (251)
T d1zk4a1          85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999984

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=2.1e-06  Score=65.60  Aligned_cols=105  Identities=19%  Similarity=0.207  Sum_probs=73.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~  151 (270)
                      .|.+++|+||++|+|...+..+...|++|+++++++++++.+.+++   |..   ...|.++.++....+++..  .|++
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999999887766443   332   2346666533333333322  2369


Q ss_pred             cEEEeCCCcch--------------------------HHHHHHcccc--CCEEEEEccccc
Q 042426          152 DIYFENVGGKM--------------------------LDAVLLNMRI--CGHIAVCGMISQ  184 (270)
Q Consensus       152 d~v~d~~g~~~--------------------------~~~~~~~l~~--~G~~v~~g~~~~  184 (270)
                      |++++++|...                          .+..+..|..  .|+++.+++...
T Consensus        86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            99999998420                          2345555644  478998887553

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.21  E-value=4.5e-06  Score=64.31  Aligned_cols=81  Identities=17%  Similarity=0.292  Sum_probs=60.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhH---HHHHHhHcCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDL---DAALNRCFPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~---~~~i~~~~~~~  150 (270)
                      +|.++||+||++++|.+.++.+...|++|+.+++++++.+.+.+++   +..   ...|..+.++.   .+.+.+..++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999999998877665443   332   22455554233   33444445457


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      .|++++++|.
T Consensus        85 idilinnag~   94 (258)
T d1ae1a_          85 LNILVNNAGV   94 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             cEEEeccccc
Confidence            8999999884

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=98.20  E-value=3.1e-06  Score=65.40  Aligned_cols=105  Identities=19%  Similarity=0.273  Sum_probs=73.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .|.++||+||++++|+++++.+...|++|+++.+++++.+.+.+++   |..   ...|..++++..+.+.+...  |++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999999999999999999998887776454   322   22455554333433333222  369


Q ss_pred             cEEEeCCCcc-----h----------------------HHHHHHcc--ccCCEEEEEccccc
Q 042426          152 DIYFENVGGK-----M----------------------LDAVLLNM--RICGHIAVCGMISQ  184 (270)
Q Consensus       152 d~v~d~~g~~-----~----------------------~~~~~~~l--~~~G~~v~~g~~~~  184 (270)
                      |++++++|..     .                      .+.++..+  +.+|+++.+++...
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  145 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAG  145 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhh
Confidence            9999998731     0                      23344544  35699999987654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=4.5e-06  Score=64.22  Aligned_cols=105  Identities=17%  Similarity=0.141  Sum_probs=73.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----C----ceeecCCchhHHHHHHhHcC--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF----D----DAFNYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~----~----~vi~~~~~~~~~~~i~~~~~--~  149 (270)
                      .|.++||+||++++|.+.++.+...|++|+++.++.++.+.+.+++..    .    ...|..+.++..+.+.+...  |
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999887776655432    1    12355554344444433322  3


Q ss_pred             CccEEEeCCCcc---h---------------HHHHHHcccc-----CCEEEEEccccc
Q 042426          150 GIDIYFENVGGK---M---------------LDAVLLNMRI-----CGHIAVCGMISQ  184 (270)
Q Consensus       150 ~~d~v~d~~g~~---~---------------~~~~~~~l~~-----~G~~v~~g~~~~  184 (270)
                      ++|++++++|..   .               ...++..|.+     +|+++.+++...
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~  139 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  139 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh
Confidence            699999999842   1               2344555543     478999887654

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.17  E-value=8.8e-06  Score=58.26  Aligned_cols=104  Identities=13%  Similarity=0.053  Sum_probs=74.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-ecCCc------------------hhHHH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAF-NYKEE------------------PDLDA  141 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi-~~~~~------------------~~~~~  141 (270)
                      .-+|+|+|+ |.+|+.++..|+.+|++|.+.+.+.++++.++ +++...+. +....                  ....+
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~-~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH-HhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            357999998 99999999999999999999999999999998 77653221 10000                  01122


Q ss_pred             HHHhHcCCCccEEEeCCCc---c----hHHHHHHccccCCEEEEEcccccccc
Q 042426          142 ALNRCFPEGIDIYFENVGG---K----MLDAVLLNMRICGHIAVCGMISQYNI  187 (270)
Q Consensus       142 ~i~~~~~~~~d~v~d~~g~---~----~~~~~~~~l~~~G~~v~~g~~~~~~~  187 (270)
                      .+.+... ..|+|+-++--   .    ..+..++.|+|+..+|.+....+-.+
T Consensus       107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn~  158 (183)
T d1l7da1         107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNC  158 (183)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSS
T ss_pred             HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCcc
Confidence            2333222 38999987742   1    56899999999999999887555433

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=3.1e-06  Score=64.79  Aligned_cols=79  Identities=18%  Similarity=0.280  Sum_probs=61.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +|.++||+||++++|.+.++.+...|++|+++++++++++.+.+..+.. .+.|.... +..+...+.. ++.|+++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~-~~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK-KQIDQFANEV-ERLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccc-cccccccccc-ccceeEEecc
Confidence            4789999999999999999999999999999999999888887555543 34455444 4444444433 3689999998


Q ss_pred             Cc
Q 042426          159 GG  160 (270)
Q Consensus       159 g~  160 (270)
                      |.
T Consensus        83 g~   84 (245)
T d2ag5a1          83 GF   84 (245)
T ss_dssp             CC
T ss_pred             cc
Confidence            83

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.14  E-value=7.5e-06  Score=63.11  Aligned_cols=105  Identities=14%  Similarity=0.211  Sum_probs=73.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHH---HhHcCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAAL---NRCFPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i---~~~~~~~  150 (270)
                      .|.++||+||++++|.+.++.+...|++|++..+++++.+.+.+++   |..   ...|..++++..+.+   .+..++.
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999999998887766454   322   224555542333333   3333346


Q ss_pred             ccEEEeCCCcc-----------h---------------HHHHHHccc--cCCEEEEEccccc
Q 042426          151 IDIYFENVGGK-----------M---------------LDAVLLNMR--ICGHIAVCGMISQ  184 (270)
Q Consensus       151 ~d~v~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  184 (270)
                      +|++++++|..           .               .+.++..+.  .+|+++.+++...
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  148 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG  148 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccc
Confidence            99999999831           0               234455553  4589999987654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.13  E-value=4.2e-06  Score=65.04  Aligned_cols=81  Identities=20%  Similarity=0.327  Sum_probs=58.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--C----ceeecCCchhHHHHHHhHcC--
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF--D----DAFNYKEEPDLDAALNRCFP--  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~--~----~vi~~~~~~~~~~~i~~~~~--  148 (270)
                      +|.+++|+||++++|.+.++.+...|++|+++++++++++.+.+++   +.  .    ...|..++++..+.+.+...  
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3689999999999999999999999999999999999887776443   22  1    22355554333333333222  


Q ss_pred             CCccEEEeCCCc
Q 042426          149 EGIDIYFENVGG  160 (270)
Q Consensus       149 ~~~d~v~d~~g~  160 (270)
                      |++|++++++|.
T Consensus        84 g~iDilvnnAG~   95 (272)
T d1xkqa_          84 GKIDVLVNNAGA   95 (272)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeCCcc
Confidence            369999999873

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.13  E-value=3e-06  Score=65.20  Aligned_cols=81  Identities=20%  Similarity=0.313  Sum_probs=58.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHcC--CCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCFP--EGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--~~~  151 (270)
                      .|.+++|+||++++|.+.++.+...|++|+++.+++++.+.+.+++   |..   ...|.+++++..+.+.+...  |++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999988877665443   432   22355554233333333221  369


Q ss_pred             cEEEeCCCc
Q 042426          152 DIYFENVGG  160 (270)
Q Consensus       152 d~v~d~~g~  160 (270)
                      |++++++|.
T Consensus        90 DilvnnAG~   98 (255)
T d1fmca_          90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEeeeCCcC
Confidence            999999884

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.12  E-value=5.6e-06  Score=63.82  Aligned_cols=105  Identities=18%  Similarity=0.293  Sum_probs=70.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CC---ceeecCCchhHHH---HHHhHcCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG---FD---DAFNYKEEPDLDA---ALNRCFPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g---~~---~vi~~~~~~~~~~---~i~~~~~~~  150 (270)
                      +|.++||+||++++|.+.++.+...|++|+.+.+++++.+.+.+++.   ..   ...|..++.+..+   .+.+..+|.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999999988877664442   21   2245555423333   333333456


Q ss_pred             ccEEEeCCCcc-----------h---------------HHHHHHccc--cCCEEEEEccccc
Q 042426          151 IDIYFENVGGK-----------M---------------LDAVLLNMR--ICGHIAVCGMISQ  184 (270)
Q Consensus       151 ~d~v~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  184 (270)
                      +|++++++|..           .               .+.++..|+  .+|+++.+++...
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  148 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG  148 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccc
Confidence            99999999831           0               234455553  3589999887554

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.09  E-value=5.3e-06  Score=63.93  Aligned_cols=80  Identities=19%  Similarity=0.324  Sum_probs=57.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      |..+||+||++|+|.+.++.+...|++|+++.+++++.+.+.+++   |..   ...|.+++++..+.+.+..  -|++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            567899999999999999999999999999999988877665443   432   2235555534433333322  24699


Q ss_pred             EEEeCCCc
Q 042426          153 IYFENVGG  160 (270)
Q Consensus       153 ~v~d~~g~  160 (270)
                      ++++++|.
T Consensus        82 ilVnnAG~   89 (257)
T d2rhca1          82 VLVNNAGR   89 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999983

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=98.08  E-value=9.9e-06  Score=62.36  Aligned_cols=105  Identities=19%  Similarity=0.226  Sum_probs=72.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-Cc----eeecCCchhHHHHHHhHcC--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF-DD----AFNYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~----vi~~~~~~~~~~~i~~~~~--~  149 (270)
                      .|.+++|+||++|+|.+.++.+...|++|+++.+++++.+.+.+++   +. ..    ..|..++++..+.+.+...  |
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            3678999999999999999999999999999999998877665333   22 12    2355555344433333322  3


Q ss_pred             CccEEEeCCCc--c--h-----------------------HHHHHHccc--cCCEEEEEccccc
Q 042426          150 GIDIYFENVGG--K--M-----------------------LDAVLLNMR--ICGHIAVCGMISQ  184 (270)
Q Consensus       150 ~~d~v~d~~g~--~--~-----------------------~~~~~~~l~--~~G~~v~~g~~~~  184 (270)
                      ++|++++++|.  .  .                       .+.++..++  .+|+++.+++...
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  146 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG  146 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhh
Confidence            69999999872  1  0                       133444444  4689999987664

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.08  E-value=2.8e-05  Score=55.04  Aligned_cols=73  Identities=23%  Similarity=0.302  Sum_probs=58.0

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      -.+.+|||+|+ |.+|.++++.+...|+ +++++.|+.++.+.+.+++|.. ++++.   ++.+.+.+     +|+||.|
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~---~~~~~l~~-----~Divi~a   91 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD---ELVDHLAR-----SDVVVSA   91 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG---GHHHHHHT-----CSEEEEC
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccch---hHHHHhcc-----CCEEEEe
Confidence            35688999998 9999999999998998 7999999988877666688853 44443   55556654     9999999


Q ss_pred             CCcc
Q 042426          158 VGGK  161 (270)
Q Consensus       158 ~g~~  161 (270)
                      ++.+
T Consensus        92 tss~   95 (159)
T d1gpja2          92 TAAP   95 (159)
T ss_dssp             CSSS
T ss_pred             cCCC
Confidence            9864

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.07  E-value=1.8e-05  Score=61.31  Aligned_cols=104  Identities=20%  Similarity=0.270  Sum_probs=71.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      +|.++||+||++++|.+.++.+...|++|++++++ ++..+.+.+   +.+.+   ...|..++++..+.+.+...  |+
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            36899999999999999999999999999998865 444443332   34443   22355554344444433322  36


Q ss_pred             ccEEEeCCCcc--------------------------hHHHHHHccccCCEEEEEcccc
Q 042426          151 IDIYFENVGGK--------------------------MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       151 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      .|+++++.|..                          ..+.++..|..+|+.+.++...
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~  155 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT  155 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc
Confidence            89999988832                          1355677888889888887644

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.05  E-value=5.7e-06  Score=63.98  Aligned_cols=80  Identities=16%  Similarity=0.302  Sum_probs=58.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--C----ceeecCCchhHHHHHHhHcC--
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GF--D----DAFNYKEEPDLDAALNRCFP--  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~--~----~vi~~~~~~~~~~~i~~~~~--  148 (270)
                      +|..+||+||++++|.+.++.+...|++|+++.+++++.+.+.+++   +.  .    ...|..++.+..+.+.+...  
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4688999999999999999999999999999999998887766443   22  1    12355554334333333322  


Q ss_pred             CCccEEEeCCC
Q 042426          149 EGIDIYFENVG  159 (270)
Q Consensus       149 ~~~d~v~d~~g  159 (270)
                      |++|++++++|
T Consensus        84 g~iDilvnnAG   94 (264)
T d1spxa_          84 GKLDILVNNAG   94 (264)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEeecccc
Confidence            36999999987

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.05  E-value=5.6e-06  Score=64.38  Aligned_cols=80  Identities=21%  Similarity=0.366  Sum_probs=58.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC------ceeecCCchhHHHHHHhHcC--
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD------DAFNYKEEPDLDAALNRCFP--  148 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~------~vi~~~~~~~~~~~i~~~~~--  148 (270)
                      +|.+++|+||++++|.+.++.+...|++|+++.+++++++.+.+++   +..      ...|..++++..+.+.+...  
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999998877765443   221      12355554333333333322  


Q ss_pred             CCccEEEeCCC
Q 042426          149 EGIDIYFENVG  159 (270)
Q Consensus       149 ~~~d~v~d~~g  159 (270)
                      |++|++++++|
T Consensus        83 G~iDilVnnAG   93 (274)
T d1xhla_          83 GKIDILVNNAG   93 (274)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeecc
Confidence            36999999987

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=98.04  E-value=6e-06  Score=61.53  Aligned_cols=112  Identities=17%  Similarity=0.231  Sum_probs=76.5

Q ss_pred             ccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeecCCc
Q 042426           60 ILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEE  136 (270)
Q Consensus        60 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~  136 (270)
                      ++..+...|. ++ +...+++|++||.+|  +|.|..++.+++..|.+|+.+...++-.+.+++   ++|.+++.-... 
T Consensus        60 ~is~P~~~a~-ml-~~L~l~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g-  134 (215)
T d1jg1a_          60 TVSAPHMVAI-ML-EIANLKPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILG-  134 (215)
T ss_dssp             EECCHHHHHH-HH-HHHTCCTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-
T ss_pred             hhhhhhhHHH-HH-HhhccCccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEEC-
Confidence            3444554554 34 567899999999999  788999999999889889999988765544442   567765533322 


Q ss_pred             hhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEE
Q 042426          137 PDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       137 ~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~  179 (270)
                       +..+....  .+.||.|+-+.+-. .-...++.|++||+++..
T Consensus       135 -d~~~g~~~--~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         135 -DGSKGFPP--KAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             -CGGGCCGG--GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -ccccCCcc--cCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence             11111111  12699998766653 446788899999999874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.03  E-value=1.4e-05  Score=61.58  Aligned_cols=104  Identities=18%  Similarity=0.246  Sum_probs=69.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-SKEKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      .|.++||+||++++|.+.++.+...|++|+++++ +++..+.+.+   +.|.+   ...|..++.+..+.+.+...  |+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence            5889999999999999999999999999998765 4444444432   34543   22355444233333332221  36


Q ss_pred             ccEEEeCCCcc--------------------------hHHHHHHccccCCEEEEEcccc
Q 042426          151 IDIYFENVGGK--------------------------MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       151 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      .|++++++|..                          ..+.++..|+.+|.++.+....
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~  143 (259)
T d1ja9a_          85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA  143 (259)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccc
Confidence            99999999842                          1355677788888887776543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=8e-06  Score=64.21  Aligned_cols=82  Identities=17%  Similarity=0.283  Sum_probs=58.5

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--------CC---ceeecCCchhHHHHHHhHc
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG--------FD---DAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g--------~~---~vi~~~~~~~~~~~i~~~~  147 (270)
                      -+|.++||+||++++|.+.++.+...|++|++++++.++.+.+.+++.        ..   ...|..++++..+.+.+..
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999888766654432        11   1235555433333333322


Q ss_pred             C--CCccEEEeCCCc
Q 042426          148 P--EGIDIYFENVGG  160 (270)
Q Consensus       148 ~--~~~d~v~d~~g~  160 (270)
                      .  |+.|++++++|.
T Consensus        90 ~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          90 DTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCeEEEEeeccc
Confidence            1  369999999883

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.02  E-value=1.8e-06  Score=65.69  Aligned_cols=104  Identities=13%  Similarity=0.152  Sum_probs=64.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC-CccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE-GIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d~v~d~~  158 (270)
                      .|.+|||+||++++|.+.++.+...|++|+.+.+.+.+..........+ ..+..+.+.....+.+.... ++|++++++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~iD~lInnA   79 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMT-DSFTEQADQVTAEVGKLLGDQKVDAILCVA   79 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCC-SCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccccceeecc-cCcHHHHHHHHHHHHHHhCCCCceEEEECC
Confidence            3679999999999999999999999999999886543211100000000 00000011223333333333 799999998


Q ss_pred             Cc----ch-----------------------HHHHHHccccCCEEEEEccccc
Q 042426          159 GG----KM-----------------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       159 g~----~~-----------------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      |.    ..                       .+.++..++++|+++.+++...
T Consensus        80 G~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~  132 (236)
T d1dhra_          80 GGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  132 (236)
T ss_dssp             CCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             cccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence            73    10                       2446667888999999987654

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=98.00  E-value=7.8e-06  Score=63.04  Aligned_cols=80  Identities=15%  Similarity=0.155  Sum_probs=57.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HhCCC---ceeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH----KFGFD---DAFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~----~~g~~---~vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      +|.++||+||++++|.+.++.+...|++|+++.++.++.+.+.+    +.|..   ...|..++++..+.+.+..  .|+
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            36899999999999999999999999999999998776544432    44543   2245555533433333322  247


Q ss_pred             ccEEEeCCC
Q 042426          151 IDIYFENVG  159 (270)
Q Consensus       151 ~d~v~d~~g  159 (270)
                      +|++++++|
T Consensus        88 iDilVnnAg   96 (260)
T d1h5qa_          88 ISGLIANAG   96 (260)
T ss_dssp             EEEEEECCC
T ss_pred             CcEeccccc
Confidence            999999987

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.00  E-value=1.9e-05  Score=62.19  Aligned_cols=105  Identities=21%  Similarity=0.220  Sum_probs=69.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC---------HHHHHHHHHHh---CCCceeecCCchhHHHHHHhHc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS---------KEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~---------~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      +|.++||+||++|+|.+.++.+...|++|++.+++         .+..+.+.+++   +.....|..+.++..+.+.+..
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            47899999999999999999999999999998543         33444333233   3334455555434443333322


Q ss_pred             --CCCccEEEeCCCcc-----------h---------------HHHHHHccc--cCCEEEEEccccc
Q 042426          148 --PEGIDIYFENVGGK-----------M---------------LDAVLLNMR--ICGHIAVCGMISQ  184 (270)
Q Consensus       148 --~~~~d~v~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  184 (270)
                        .|++|++++++|..           .               .+.++..|+  .+|++|.+++...
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~  152 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG  152 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence              24799999999831           0               244566664  3589999987654

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.98  E-value=7.6e-05  Score=57.36  Aligned_cols=99  Identities=20%  Similarity=0.322  Sum_probs=71.9

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~  148 (270)
                      ...++++|++||=.|  .|.|.+++.+|+..|  .+|+.+..+++..+.+++   .+|....+..... +.    ....+
T Consensus        97 ~~l~i~pG~~VLDiG--~GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~-d~----~~~~~  169 (266)
T d1o54a_          97 MMLDVKEGDRIIDTG--VGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DI----SEGFD  169 (266)
T ss_dssp             HHTTCCTTCEEEEEC--CTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CG----GGCCS
T ss_pred             HhhCCCCCCEEEECC--CCCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec-cc----ccccc
Confidence            568899999999998  566888889999875  599999999998887763   3454322222222 22    11222


Q ss_pred             C-CccEEEeCCCcc--hHHHHHHccccCCEEEEE
Q 042426          149 E-GIDIYFENVGGK--MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       149 ~-~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~  179 (270)
                      . .+|.|+--...+  .+..+.+.|+|||+++.+
T Consensus       170 ~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~  203 (266)
T d1o54a_         170 EKDVDALFLDVPDPWNYIDKCWEALKGGGRFATV  203 (266)
T ss_dssp             CCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEE
T ss_pred             ccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEE
Confidence            2 688887766653  889999999999999875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.98  E-value=3.9e-05  Score=58.23  Aligned_cols=103  Identities=16%  Similarity=0.166  Sum_probs=70.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCE-------EEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc-
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCY-------VVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF-  147 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~-------v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~-  147 (270)
                      +.+||+||++|+|.+.++.+...|++       |+...+++++++.+.+++   |..   ...|.++..+..+.+.+.. 
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35899999999999999988888886       889999998887776444   322   1235555433333333322 


Q ss_pred             -CCCccEEEeCCCcc-----------h---------------HHHHHHccc--cCCEEEEEccccc
Q 042426          148 -PEGIDIYFENVGGK-----------M---------------LDAVLLNMR--ICGHIAVCGMISQ  184 (270)
Q Consensus       148 -~~~~d~v~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  184 (270)
                       .|++|++++++|..           .               .+.++..|+  .+|+++.+++...
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  147 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA  147 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence             23699999999831           1               244556664  3689999887654

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.97  E-value=1.8e-05  Score=60.36  Aligned_cols=103  Identities=21%  Similarity=0.258  Sum_probs=68.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HhCCC---ceeecCCchhHHHHHHhHc--CCCcc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSA-RSKEKVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCF--PEGID  152 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~-~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~~~~d  152 (270)
                      ..+||+||++++|++.++.+...|++|++.+ ++++..+.+.+   +.|..   ...|..+.++..+.+.+..  .|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3689999999999999999999999998875 46666555543   34432   2235555433333333322  24799


Q ss_pred             EEEeCCCcc-----------h---------------HHHHHHcc--ccCCEEEEEccccc
Q 042426          153 IYFENVGGK-----------M---------------LDAVLLNM--RICGHIAVCGMISQ  184 (270)
Q Consensus       153 ~v~d~~g~~-----------~---------------~~~~~~~l--~~~G~~v~~g~~~~  184 (270)
                      ++++++|..           .               .+.++..|  +.+|+++.+++...
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~  141 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG  141 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhh
Confidence            999999831           0               24456666  34699999987654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.97  E-value=4.6e-06  Score=63.39  Aligned_cols=98  Identities=17%  Similarity=0.153  Sum_probs=63.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCC-----chhHHHHHHhH-cCCCccEE
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKE-----EPDLDAALNRC-FPEGIDIY  154 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~-----~~~~~~~i~~~-~~~~~d~v  154 (270)
                      +.+|||+||++++|.+.++.+...|++|+++++++++...      ....+....     .....+.+... ..+++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD------SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS------EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc------ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            4579999999999999999999999999999987543211      001111111     00112222222 23479999


Q ss_pred             EeCCCcc----h-----------------------HHHHHHccccCCEEEEEccccc
Q 042426          155 FENVGGK----M-----------------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       155 ~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      ++++|..    .                       .+..+..|+++|+++.++....
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~  132 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  132 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh
Confidence            9998831    0                       2446667788899999987654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.96  E-value=2.1e-05  Score=61.68  Aligned_cols=81  Identities=11%  Similarity=0.262  Sum_probs=57.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCC-c--eeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK----FGFD-D--AFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~----~g~~-~--vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      +|.++||+||++++|.+.++.+...|++|+++.++.++.+.+.++    .|.. .  ..|..+..+....+....  .++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            468999999999999999999999999999999998876554433    3433 1  235555423333332221  247


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus       104 iDilvnnAg~  113 (294)
T d1w6ua_         104 PNIVINNAAG  113 (294)
T ss_dssp             CSEEEECCCC
T ss_pred             cchhhhhhhh
Confidence            9999999983

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.93  E-value=1.5e-05  Score=61.26  Aligned_cols=77  Identities=16%  Similarity=0.202  Sum_probs=55.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD---DAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      .+||+||++++|++.++.+...|++|+++++++++.+.+.+++   |..   ...|..++++..+.+.+..  -|++|++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   82 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            4699999999999999999899999999999998877665443   432   2245555533333333322  2469999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      ++++|
T Consensus        83 VnnAG   87 (255)
T d1gega_          83 VNNAG   87 (255)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99988

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.91  E-value=1.5e-05  Score=60.96  Aligned_cols=78  Identities=18%  Similarity=0.170  Sum_probs=56.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCC---ceeecCCchh---HHHHHHhHcCC-Ccc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFGFD---DAFNYKEEPD---LDAALNRCFPE-GID  152 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~---~~~~i~~~~~~-~~d  152 (270)
                      .+|||+||++|+|.+.++.+...|+  +|+.++|+.++.+.+++..+..   ...|..+..+   +.+.+.+..+. +.|
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~id   83 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLS   83 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            6899999999999999988877885  7999999999888887444332   2235555422   33444443333 699


Q ss_pred             EEEeCCC
Q 042426          153 IYFENVG  159 (270)
Q Consensus       153 ~v~d~~g  159 (270)
                      ++++++|
T Consensus        84 ilinnAG   90 (250)
T d1yo6a1          84 LLINNAG   90 (250)
T ss_dssp             EEEECCC
T ss_pred             EEEEcCc
Confidence            9999998

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.91  E-value=1.7e-05  Score=61.05  Aligned_cols=81  Identities=21%  Similarity=0.237  Sum_probs=55.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HhCCC---ceeecCCchhHHHHHHhHcC--CC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKH---KFGFD---DAFNYKEEPDLDAALNRCFP--EG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--~~  150 (270)
                      +|.+++|+||++++|.+.++.+...|++|+++.++.+ ..+.+.+   +.|..   ...|..++++..+.+.+...  |+
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999999998743 4443332   34442   22355554333333333221  36


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|++++++|.
T Consensus        86 iDiLVnnAG~   95 (261)
T d1geea_          86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEeecccee
Confidence            9999999983

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.91  E-value=2.3e-05  Score=60.36  Aligned_cols=106  Identities=17%  Similarity=0.263  Sum_probs=70.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH----HhCCC---ceeecCCchhHHHHHHhHcC--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLKH----KFGFD---DAFNYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~~----~~g~~---~vi~~~~~~~~~~~i~~~~~--~  149 (270)
                      +|.++||+||++++|.+.++.+...|++|+++.++ .+..+.+.+    +.|..   ...|..+.++..+.+.+...  |
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999986 445544432    33443   12355554333333333221  3


Q ss_pred             CccEEEeCCCcc-----------h---------------HHHHHHcccc--CCEEEEEcccccc
Q 042426          150 GIDIYFENVGGK-----------M---------------LDAVLLNMRI--CGHIAVCGMISQY  185 (270)
Q Consensus       150 ~~d~v~d~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~~  185 (270)
                      ++|++++++|..           .               .+.++..|..  +|+++.+++....
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~  146 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL  146 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce
Confidence            699999999831           0               2445556554  5899998876553

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.90  E-value=2.9e-05  Score=59.22  Aligned_cols=105  Identities=13%  Similarity=0.169  Sum_probs=70.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCC---ceeecCCchhHHHHHHhHcC--CCccE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFGFD---DAFNYKEEPDLDAALNRCFP--EGIDI  153 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--~~~d~  153 (270)
                      +|.+++|+||++++|.+.++.+...|++|+++.++++ ..+...++.|..   ...|.++..+....+.+...  |++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3689999999999999999999999999999998653 223333366653   23355555333333333222  36999


Q ss_pred             EEeCCCcc-----------h---------------HHHHHHcccc--CCEEEEEccccc
Q 042426          154 YFENVGGK-----------M---------------LDAVLLNMRI--CGHIAVCGMISQ  184 (270)
Q Consensus       154 v~d~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  184 (270)
                      +++++|..           .               .+..+..|..  +|+++.+++...
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~  142 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY  142 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh
Confidence            99999841           1               2345555543  589999887655

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.88  E-value=2.2e-05  Score=60.29  Aligned_cols=105  Identities=15%  Similarity=0.107  Sum_probs=68.1

Q ss_pred             CCcEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCce--eecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASG--AVGQLVGQFVKLVGCYVVGSARSKEKVDLLK---HKFGFDDA--FNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g--~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~---~~~g~~~v--i~~~~~~~~~~~i~~~~--~~~  150 (270)
                      +|.++||+||+|  |+|.+.++.+...|++|++..++++..+.++   +..+....  .|..++.+..+.+.+..  .|+
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            478999999987  8999999999999999999998876544443   12333222  34444423333333221  136


Q ss_pred             ccEEEeCCCcc---------------h---------------HHHHHHccccCCEEEEEccccc
Q 042426          151 IDIYFENVGGK---------------M---------------LDAVLLNMRICGHIAVCGMISQ  184 (270)
Q Consensus       151 ~d~v~d~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~  184 (270)
                      .|++++++|..               .               .+.....++++|+++.+++...
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~  150 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS  150 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh
Confidence            99999988731               0               1233446677899998876554

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.87  E-value=7.4e-05  Score=58.22  Aligned_cols=102  Identities=11%  Similarity=0.025  Sum_probs=72.3

Q ss_pred             HHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhH
Q 042426           70 GGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        70 ~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~  146 (270)
                      ..+.+..++++|++||=+|  +|.|-.+..+|+..|++|++++.|++..+.+++   +.|....+..... ++.     .
T Consensus        51 ~~~~~~l~l~~G~~VLDiG--CG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~-d~~-----~  122 (291)
T d1kpia_          51 KLALDKLNLEPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GWE-----E  122 (291)
T ss_dssp             HHHHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEEC-CGG-----G
T ss_pred             HHHHHhcCCCCCCEEEEec--CcchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhh-ccc-----c
Confidence            3344668999999999998  788888999999999999999999998766652   3455433322221 221     1


Q ss_pred             cCCCccEEEe-----CCCc-----------chHHHHHHccccCCEEEEE
Q 042426          147 FPEGIDIYFE-----NVGG-----------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       147 ~~~~~d~v~d-----~~g~-----------~~~~~~~~~l~~~G~~v~~  179 (270)
                      .++.||.|+.     .++.           ..++.+.++|+|+|+++.-
T Consensus       123 ~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~  171 (291)
T d1kpia_         123 FDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH  171 (291)
T ss_dssp             CCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEE
T ss_pred             cccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEE
Confidence            2346998864     3332           2578899999999999853

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.85  E-value=2.6e-05  Score=58.39  Aligned_cols=111  Identities=11%  Similarity=0.057  Sum_probs=72.3

Q ss_pred             cCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHH
Q 042426           61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLD  140 (270)
Q Consensus        61 l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  140 (270)
                      ++.+...|. ++ +...+++|++||-+|  +|.|..++.+++. +.+|+.+..+++-.+.+++.+....-+..... +..
T Consensus        53 ~~~p~~~a~-ml-~~L~l~~g~~VLdIG--~GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~-d~~  126 (224)
T d1vbfa_          53 TTALNLGIF-ML-DELDLHKGQKVLEIG--TGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILG-DGT  126 (224)
T ss_dssp             ECCHHHHHH-HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEES-CGG
T ss_pred             eehhhhHHH-HH-HHhhhcccceEEEec--CCCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccC-chh
Confidence            344444454 34 567899999999999  6678888877775 67999999999988888744433211111111 111


Q ss_pred             HHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEE
Q 042426          141 AALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       141 ~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~  179 (270)
                      ....+  .+.||.|+-+.+.+ .....++.|++||++|..
T Consensus       127 ~g~~~--~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         127 LGYEE--EKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             GCCGG--GCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hcchh--hhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence            11111  13599988665543 456778999999999874

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.85  E-value=4.2e-05  Score=59.46  Aligned_cols=101  Identities=13%  Similarity=0.021  Sum_probs=71.4

Q ss_pred             HhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHc
Q 042426           71 GLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        71 ~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      .+.+..++++|++||=+|  +|.|..++.+++..|++|++++.|++..+.+++.   .|...-+..... ++    + ..
T Consensus        53 ~~~~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~-d~----~-~~  124 (285)
T d1kpga_          53 LALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----E-QF  124 (285)
T ss_dssp             HHHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----G-GC
T ss_pred             HHHHHcCCCCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh-hh----h-cc
Confidence            344667899999999998  8899999999999999999999999988887643   232222222111 22    1 11


Q ss_pred             CCCccEEEe-----CCCc----chHHHHHHccccCCEEEEE
Q 042426          148 PEGIDIYFE-----NVGG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       148 ~~~~d~v~d-----~~g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                      ++.||.|+.     .++.    ..+..+.++|+|+|+++.-
T Consensus       125 ~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~  165 (285)
T d1kpga_         125 DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH  165 (285)
T ss_dssp             CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred             cccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEE
Confidence            346887754     3332    2577888999999999853

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.84  E-value=5.7e-05  Score=53.87  Aligned_cols=74  Identities=22%  Similarity=0.180  Sum_probs=56.9

Q ss_pred             HhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC
Q 042426           71 GLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        71 ~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      ++ +..++.++.+|+|+|+ ||.+.+++.-++..|+ +++++.|+.++.+.+.+.++...+ +...            ..
T Consensus         8 ~l-~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~~------------~~   72 (167)
T d1npya1           8 LI-EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSLE------------NQ   72 (167)
T ss_dssp             HH-HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCCT------------TC
T ss_pred             HH-HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hccc------------cc
Confidence            44 4455667789999997 9999999999999998 899999999998888767765432 1111            12


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      .+|++++|+.
T Consensus        73 ~~DliINaTp   82 (167)
T d1npya1          73 QADILVNVTS   82 (167)
T ss_dssp             CCSEEEECSS
T ss_pred             chhhheeccc
Confidence            4899999976

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.82  E-value=3.5e-05  Score=57.34  Aligned_cols=111  Identities=21%  Similarity=0.259  Sum_probs=74.1

Q ss_pred             cCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeecCC
Q 042426           61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHK---FGFDDAFNYKE  135 (270)
Q Consensus        61 l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~  135 (270)
                      +..+...|. ++ +...+++|++||-+|  +|.|..++.+++..|  .+|+.+..+++..+.+++.   .+..++.-...
T Consensus        58 i~~P~~~a~-~l-~~l~l~~g~~VLdiG--~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~  133 (213)
T d1dl5a1          58 SSQPSLMAL-FM-EWVGLDKGMRVLEIG--GGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG  133 (213)
T ss_dssp             ECCHHHHHH-HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred             eccchhhHH-HH-HhhhccccceEEEec--CccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC
Confidence            333444444 34 567899999999999  566899999999876  4899999999877777643   34433321111


Q ss_pred             chhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEE
Q 042426          136 EPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       136 ~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~  179 (270)
                        +..+....  .+.||+|+.+.+-. ..+..++.|+|+|+++..
T Consensus       134 --d~~~~~~~--~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         134 --DGYYGVPE--FSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             --CGGGCCGG--GCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             --chHHcccc--ccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence              11111111  12599999877654 446788999999999873

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=2.4e-05  Score=60.53  Aligned_cols=106  Identities=21%  Similarity=0.222  Sum_probs=68.8

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-ce--eecCCchhHHHHHHhH--cCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF----GFD-DA--FNYKEEPDLDAALNRC--FPE  149 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~v--i~~~~~~~~~~~i~~~--~~~  149 (270)
                      -+|.++||+||++|+|++.++.+...|++|+++++++++++.+.++.    +.. ..  .|..+...........  ..+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999999888776432    221 11  2333321222222211  123


Q ss_pred             CccEEEeCCCcc-----------h---------------HHHHHHccc-cCCEEEEEccccc
Q 042426          150 GIDIYFENVGGK-----------M---------------LDAVLLNMR-ICGHIAVCGMISQ  184 (270)
Q Consensus       150 ~~d~v~d~~g~~-----------~---------------~~~~~~~l~-~~G~~v~~g~~~~  184 (270)
                      ..|+++++.|..           .               .+..+..|+ .+|+++.+++...
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~  153 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG  153 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchh
Confidence            689998877631           0               233444444 4689998877654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.80  E-value=7.9e-05  Score=56.23  Aligned_cols=73  Identities=29%  Similarity=0.424  Sum_probs=53.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +|.++||+||++++|.+.++.+...|++|++++++++..+    +.+.. ...|.++  +....+.+.  +.+|++++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~----~~~~~~~~~Dv~~--~~~~~~~~~--g~iD~lVnnA   74 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSGHRYVVCDLRK--DLDLLFEKV--KEVDILVLNA   74 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTCSEEEECCTTT--CHHHHHHHS--CCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH----hcCCcEEEcchHH--HHHHHHHHh--CCCcEEEecc
Confidence            4689999999999999999999999999999999876554    44433 2234433  333333332  3599999998


Q ss_pred             Cc
Q 042426          159 GG  160 (270)
Q Consensus       159 g~  160 (270)
                      |.
T Consensus        75 G~   76 (234)
T d1o5ia_          75 GG   76 (234)
T ss_dssp             CC
T ss_pred             cc
Confidence            83

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.79  E-value=8.2e-05  Score=56.54  Aligned_cols=98  Identities=7%  Similarity=0.110  Sum_probs=69.5

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---C-CCceeecCCchhHHHHHHhHc
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKF---G-FDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~---g-~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      ...+++||++||=.|  +|.|.+++.+|+..|  .+|+.+..+++..+.+++.+   + ..++ ..... ++.+    ..
T Consensus        79 ~~l~i~pG~rVLEiG--~GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv-~~~~~-Di~~----~~  150 (250)
T d1yb2a1          79 MRCGLRPGMDILEVG--VGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRS-DIAD----FI  150 (250)
T ss_dssp             --CCCCTTCEEEEEC--CTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECS-CTTT----CC
T ss_pred             HHcCCCCcCEEEEee--eeCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCce-EEEEe-eeec----cc
Confidence            457899999999998  566788888888775  48999999999888887433   2 2332 22222 3222    12


Q ss_pred             CC-CccEEEeCCCc--chHHHHHHccccCCEEEEE
Q 042426          148 PE-GIDIYFENVGG--KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       148 ~~-~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~  179 (270)
                      .+ .||.|+--...  ..+..+.+.|+|+|+++.+
T Consensus       151 ~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~  185 (250)
T d1yb2a1         151 SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFY  185 (250)
T ss_dssp             CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEE
T ss_pred             ccceeeeeeecCCchHHHHHHHHHhcCCCceEEEE
Confidence            23 69988855554  3889999999999999875

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.79  E-value=4.3e-05  Score=59.32  Aligned_cols=102  Identities=15%  Similarity=0.109  Sum_probs=70.7

Q ss_pred             HHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHh
Q 042426           69 YGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNR  145 (270)
Q Consensus        69 ~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~  145 (270)
                      +..+.+..++++|++||=+|  +|.|-.+..+++..|++|++++.|++..+.+++.   .|....+..... ++.     
T Consensus        41 ~~~~~~~l~l~~g~~VLDiG--CG~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~-d~~-----  112 (280)
T d2fk8a1          41 VDLNLDKLDLKPGMTLLDIG--CGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GWE-----  112 (280)
T ss_dssp             HHHHHTTSCCCTTCEEEEES--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CGG-----
T ss_pred             HHHHHHHcCCCCCCEEEEec--CCchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhh-hhh-----
Confidence            33444667899999999999  6777788888988899999999999998887743   243222222111 211     


Q ss_pred             HcCCCccEEEe-----CCCcc----hHHHHHHccccCCEEEE
Q 042426          146 CFPEGIDIYFE-----NVGGK----MLDAVLLNMRICGHIAV  178 (270)
Q Consensus       146 ~~~~~~d~v~d-----~~g~~----~~~~~~~~l~~~G~~v~  178 (270)
                      ..++.||.|+.     .++.+    .++.+.++|+|+|+++.
T Consensus       113 ~~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i  154 (280)
T d2fk8a1         113 DFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV  154 (280)
T ss_dssp             GCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred             hhccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEE
Confidence            12346888854     33322    57888999999999985

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.79  E-value=3.1e-05  Score=58.92  Aligned_cols=105  Identities=14%  Similarity=0.158  Sum_probs=73.5

Q ss_pred             HHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHh
Q 042426           69 YGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNR  145 (270)
Q Consensus        69 ~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~  145 (270)
                      +..+....++++|++||=+|  +|.|..+..+++..|++|++++.+++..+.+++   ..|....++.... ++.+.   
T Consensus        22 ~~~l~~~~~l~pg~~VLDiG--CG~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~-d~~~~---   95 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLG--SGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-DAAGY---   95 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEET--CTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CCTTC---
T ss_pred             HHHHHHHcCCCCCCEEEEEc--CCCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhh-HHhhc---
Confidence            44566788999999999998  677778888888889999999999988776662   3455432222222 22111   


Q ss_pred             HcCCCccEEEeCCC-----c--chHHHHHHccccCCEEEEE
Q 042426          146 CFPEGIDIYFENVG-----G--KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       146 ~~~~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~  179 (270)
                      ...+.||.|+..-.     .  ..+..+.+.|+|+|+++..
T Consensus        96 ~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~  136 (245)
T d1nkva_          96 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG  136 (245)
T ss_dssp             CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred             cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEE
Confidence            12237999875322     1  3678888999999998864

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=0.00013  Score=52.10  Aligned_cols=102  Identities=13%  Similarity=0.057  Sum_probs=65.2

Q ss_pred             HHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC
Q 042426           70 GGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        70 ~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      .+|.+..-..+|.+|+|+|+ ||.+.+++.-+..+|++|+++.|+.++.+.+.+.+.....+..-.. +      +....
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~-~------~~~~~   78 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM-D------ELEGH   78 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS-G------GGTTC
T ss_pred             HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccc-c------ccccc
Confidence            34544444457889999997 9999999999999999999999999988887755543211211111 1      11112


Q ss_pred             CccEEEeCCCcchH----HHHHHccccCCEEEEE
Q 042426          150 GIDIYFENVGGKML----DAVLLNMRICGHIAVC  179 (270)
Q Consensus       150 ~~d~v~d~~g~~~~----~~~~~~l~~~G~~v~~  179 (270)
                      .+|++++|+.....    ..-...+.++..++.+
T Consensus        79 ~~dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~  112 (170)
T d1nyta1          79 EFDLIINATSSGISGDIPAIPSSLIHPGIYCYDM  112 (170)
T ss_dssp             CCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEES
T ss_pred             ccceeecccccCcccCCCCCcHHHhccCcEEEEe
Confidence            58999999863211    1112345556555554

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.73  E-value=1.7e-05  Score=60.91  Aligned_cols=105  Identities=16%  Similarity=0.069  Sum_probs=66.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCC----ceeecC-CchhHHHHHHhHcC--C
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK---HKFGFD----DAFNYK-EEPDLDAALNRCFP--E  149 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~---~~~g~~----~vi~~~-~~~~~~~~i~~~~~--~  149 (270)
                      +|.++||+||++|+|.+++..+...|++|++++++.++.+.+.   +..+-.    ...|.. +..+..+.+.+...  |
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999987665544443   122221    223333 22123332332222  3


Q ss_pred             CccEEEeCCCcc---h---------------HHHHHHccc-----cCCEEEEEccccc
Q 042426          150 GIDIYFENVGGK---M---------------LDAVLLNMR-----ICGHIAVCGMISQ  184 (270)
Q Consensus       150 ~~d~v~d~~g~~---~---------------~~~~~~~l~-----~~G~~v~~g~~~~  184 (270)
                      ++|++++++|..   .               .+..+..|.     .+|+++.+++...
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~  141 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh
Confidence            699999999942   1               233444443     2488998877654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=2.2e-05  Score=58.09  Aligned_cols=96  Identities=14%  Similarity=0.118  Sum_probs=63.5

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      ..+|+|+||+|.+|..++..+...|.+|.+++|++++.+... ..+...+ .|..+.+++.+.+.     ++|+||.++|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~~gD~~d~~~l~~al~-----~~d~vi~~~g   76 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVA-----GQDAVIVLLG   76 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHT-----TCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-ccccccccccccchhhHHHHhc-----CCCEEEEEec
Confidence            368999999999999999988888999999999988765433 3333321 24444323333332     4899999997


Q ss_pred             cc-----------hHHHHHHccccC--CEEEEEccc
Q 042426          160 GK-----------MLDAVLLNMRIC--GHIAVCGMI  182 (270)
Q Consensus       160 ~~-----------~~~~~~~~l~~~--G~~v~~g~~  182 (270)
                      ..           .....++.++..  .+++.++..
T Consensus        77 ~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~  112 (205)
T d1hdoa_          77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (205)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             cCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeee
Confidence            42           123344444544  377877653

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.67  E-value=1e-05  Score=61.44  Aligned_cols=76  Identities=16%  Similarity=0.162  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcC--CCccEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFP--EGIDIYFEN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~--~~~d~v~d~  157 (270)
                      .|.++||+||++++|.+.++.+...|++|+++.+++++.+.+.     ....|..++++..+.+.+...  |++|+++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-----EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-----EEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence            4689999999999999999999999999999998865443221     123455554233333333222  369999999


Q ss_pred             CCc
Q 042426          158 VGG  160 (270)
Q Consensus       158 ~g~  160 (270)
                      +|.
T Consensus        81 AG~   83 (237)
T d1uzma1          81 AGL   83 (237)
T ss_dssp             CSC
T ss_pred             ecc
Confidence            883

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.66  E-value=0.00018  Score=54.99  Aligned_cols=83  Identities=18%  Similarity=0.233  Sum_probs=55.9

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHH-------HHHHHHHhCCC---ceeecCCchhHHHHHHh
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEK-------VDLLKHKFGFD---DAFNYKEEPDLDAALNR  145 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~-------~~~~~~~~g~~---~vi~~~~~~~~~~~i~~  145 (270)
                      .++|+.++||+||++++|++.++.+...|+ +|+.+.|+..+       .+.++ ..|..   ...|..+.++..+.+.+
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHH-hccccccccccccchHHHHHHhhcc
Confidence            578889999999999999999998888898 67777776322       22233 45543   22355555344444443


Q ss_pred             HcCC-CccEEEeCCCc
Q 042426          146 CFPE-GIDIYFENVGG  160 (270)
Q Consensus       146 ~~~~-~~d~v~d~~g~  160 (270)
                      .... +.|.++.+.|.
T Consensus        84 i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             cccccccccccccccc
Confidence            3333 68999999883

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.65  E-value=2e-05  Score=60.32  Aligned_cols=100  Identities=19%  Similarity=0.149  Sum_probs=66.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG----FDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g----~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +.||+||++++|++.++.+...|++|++..++.++.+.++ ..+    ...+.+..+...+.+.+.+.. |+.|++++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~~~~~~-G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE-AFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH-HHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hhhCcEEEeccCCHHHHHHHHHHHHHHc-CCCCEEEECC
Confidence            6899999999999999999999999999998888777765 322    122323222223333333333 3699999887


Q ss_pred             Ccc----h-----------------------HHHHHHcccc--CCEEEEEccccc
Q 042426          159 GGK----M-----------------------LDAVLLNMRI--CGHIAVCGMISQ  184 (270)
Q Consensus       159 g~~----~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  184 (270)
                      |..    .                       .+.++..|..  +|+++.+++...
T Consensus        80 g~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~  134 (252)
T d1zmta1          80 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP  134 (252)
T ss_dssp             CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT
T ss_pred             cCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc
Confidence            621    0                       1334445533  599999887654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=0.00012  Score=55.67  Aligned_cols=49  Identities=14%  Similarity=0.131  Sum_probs=44.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD  128 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~  128 (270)
                      +|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999999998888777677754

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=0.00043  Score=53.68  Aligned_cols=102  Identities=17%  Similarity=0.210  Sum_probs=64.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEE---EEEeCCHHHHHH---HHHHhCC---C---ceeecCCchhHHHHHHhHcCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYV---VGSARSKEKVDL---LKHKFGF---D---DAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v---~~~~~~~~~~~~---~~~~~g~---~---~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      .+||+||++|+|.+.++.+...|++|   +.+.++.++.+.   ..+++..   .   ...|..+..+....+.+...+.
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~   83 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR   83 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence            57899999999999999988889864   444554433322   2223322   1   2246666534555555544458


Q ss_pred             ccEEEeCCCcc-----------h---------------HHHHHHccc--cCCEEEEEccccc
Q 042426          151 IDIYFENVGGK-----------M---------------LDAVLLNMR--ICGHIAVCGMISQ  184 (270)
Q Consensus       151 ~d~v~d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  184 (270)
                      .|+++++.|..           .               .+..+..|.  .+|+++.+++...
T Consensus        84 idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g  145 (285)
T d1jtva_          84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG  145 (285)
T ss_dssp             CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG
T ss_pred             hhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhh
Confidence            99999998731           1               234445553  3589999887654

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=0.00017  Score=53.90  Aligned_cols=112  Identities=19%  Similarity=0.205  Sum_probs=71.3

Q ss_pred             cCchhhhHHHHhhhh-cCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---CC-----Cc
Q 042426           61 LGMPGLTAYGGLHEL-CSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKF---GF-----DD  129 (270)
Q Consensus        61 l~~~~~ta~~~l~~~-~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~---g~-----~~  129 (270)
                      +..+...|. ++..+ ..+++|++||-.|  +|.|..++.+++..|  .+|+.+..+++-.+.+++.+   +.     ..
T Consensus        57 is~P~~~a~-~le~L~~~l~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~  133 (224)
T d1i1na_          57 ISAPHMHAY-ALELLFDQLHEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGR  133 (224)
T ss_dssp             ECCHHHHHH-HHHHTTTTSCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSS
T ss_pred             hhhhHHHHH-HHHHHhhccCCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccc
Confidence            333444444 44222 3789999999998  788999999998876  49999999988776665332   22     11


Q ss_pred             eeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEE
Q 042426          130 AFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       130 vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~  179 (270)
                      +. .... +......+  .+.||.|+-+..-. ..+..++.|+|||++|..
T Consensus       134 ~~-~~~g-D~~~~~~~--~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         134 VQ-LVVG-DGRMGYAE--EAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             EE-EEES-CGGGCCGG--GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             eE-EEEe-ecccccch--hhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            11 1101 11110111  12599998776653 557788999999999873

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.52  E-value=8.9e-05  Score=56.45  Aligned_cols=78  Identities=13%  Similarity=0.213  Sum_probs=52.1

Q ss_pred             cEEEEecCCchHHHHHHHHHH---HcCCEEEEEeCCHHHHHHHHH--HhCCC---ceeecCCchhHHHHHH---hHcC-C
Q 042426           82 EYVYVSAASGAVGQLVGQFVK---LVGCYVVGSARSKEKVDLLKH--KFGFD---DAFNYKEEPDLDAALN---RCFP-E  149 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~---~~g~~v~~~~~~~~~~~~~~~--~~g~~---~vi~~~~~~~~~~~i~---~~~~-~  149 (270)
                      .+|||+||++|+|.+.++.+.   ..|++|++++|++++.+.+++  +.+..   ...|..+.++..+.+.   .... +
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            379999999999999887553   458899999999887665542  12222   2245555434433333   3222 3


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ++|+++++.|
T Consensus        83 ~iDiLvnNAg   92 (248)
T d1snya_          83 GLNVLFNNAG   92 (248)
T ss_dssp             CCSEEEECCC
T ss_pred             CcceEEeecc
Confidence            7999999987

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.50  E-value=0.00035  Score=50.51  Aligned_cols=100  Identities=21%  Similarity=0.234  Sum_probs=67.7

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ...++++|++||=.|  +|.|..++.+|+. +.+|+++..+++..+.+++   +.|...-+..... +..+....  .+.
T Consensus        27 ~~l~~~~g~~VLDiG--cGsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g-da~~~~~~--~~~  100 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVG--CGTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCK--IPD  100 (186)
T ss_dssp             HHHCCCTTCEEEEES--CTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTT--SCC
T ss_pred             HhcCCCCCCEEEEEE--CCeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC-chhhcccc--cCC
Confidence            346789999999998  5666777777764 5699999999988777763   3555312222222 44333322  126


Q ss_pred             ccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426          151 IDIYFENVGG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       151 ~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                      +|.|+-..+.    ..++.+.+.|+|+|+++..
T Consensus       101 ~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_         101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cCEEEEeCccccchHHHHHHHHHhCcCCEEEEE
Confidence            9988865443    2677888999999998864

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.49  E-value=0.00028  Score=51.20  Aligned_cols=98  Identities=14%  Similarity=0.020  Sum_probs=66.9

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-----------------eecCCch
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-----------------FNYKEEP  137 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-----------------i~~~~~~  137 (270)
                      ...+.+|.+||..|  +|.|..++.+|+. |++|++++.|++-.+.++++.+....                 +...-. 
T Consensus        15 ~l~~~~~~rvLd~G--CG~G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-   90 (201)
T d1pjza_          15 SLNVVPGARVLVPL--CGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF-   90 (201)
T ss_dssp             HHCCCTTCEEEETT--TCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS-
T ss_pred             HcCCCCCCEEEEec--CcCCHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccc-
Confidence            34688999999998  7888999999874 99999999999999999855543211                 000000 


Q ss_pred             hHHHHHHhHcCCCccEEEeCCCc---------chHHHHHHccccCCEEEEEc
Q 042426          138 DLDAALNRCFPEGIDIYFENVGG---------KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       138 ~~~~~i~~~~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +......    ..+|.|++...-         ..+....+.|+|+|+++...
T Consensus        91 ~l~~~~~----~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          91 ALTARDI----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SSTHHHH----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             ccccccc----cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            1111111    148999885542         24677888999999977543

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.40  E-value=0.00014  Score=54.21  Aligned_cols=112  Identities=16%  Similarity=0.192  Sum_probs=67.9

Q ss_pred             cCchhhhHHHHhhhh-cCCCCCcEEEEecCCchHHHHHHHHHHHc---C----CEEEEEeCCHHHHHHHHHHh-------
Q 042426           61 LGMPGLTAYGGLHEL-CSPKKGEYVYVSAASGAVGQLVGQFVKLV---G----CYVVGSARSKEKVDLLKHKF-------  125 (270)
Q Consensus        61 l~~~~~ta~~~l~~~-~~~~~g~~vlI~ga~g~vG~~ai~la~~~---g----~~v~~~~~~~~~~~~~~~~~-------  125 (270)
                      +..+...|. ++..+ ..+++|++||.+|  +|.|..++.+++..   |    .+|+.+...++-.+.+++.+       
T Consensus        61 is~P~~~a~-~l~~L~~~l~~g~~VLeIG--tGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~  137 (223)
T d1r18a_          61 ISAPHMHAF-ALEYLRDHLKPGARILDVG--SGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM  137 (223)
T ss_dssp             ECCHHHHHH-HHHHTTTTCCTTCEEEEES--CTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred             eehhhhHHH-HHHHHhhccCCCCeEEEec--CCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhh
Confidence            333444554 34222 3789999999999  67777777776654   3    38999998887666554221       


Q ss_pred             -CCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-hHHHHHHccccCCEEEEE
Q 042426          126 -GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       126 -g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~  179 (270)
                       +..++.....  +..+...+  .+.||.|+-+.+-+ .-+..++.|++||+++..
T Consensus       138 ~~~~nv~~~~~--d~~~~~~~--~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         138 LDSGQLLIVEG--DGRKGYPP--NAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             HHHTSEEEEES--CGGGCCGG--GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cCccEEEEEec--cccccccc--ccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence             2222221111  11111111  12699888766653 446778899999999873

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.39  E-value=0.00034  Score=53.85  Aligned_cols=81  Identities=11%  Similarity=0.108  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCc--eeecCCchhHHHHHHhHc--CCC
Q 042426           80 KGEYVYVSAASG--AVGQLVGQFVKLVGCYVVGSARSKE---KVDLLKHKFGFDD--AFNYKEEPDLDAALNRCF--PEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g--~vG~~ai~la~~~g~~v~~~~~~~~---~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~--~~~  150 (270)
                      +|.++||+||+|  |+|.+.++.+...|++|+++.++++   +.+.+.++.+...  ..|..+..+..+.+.+..  .+.
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   83 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   83 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence            478999999876  7999999999999999999998764   3333332333222  233343323333333222  246


Q ss_pred             ccEEEeCCCc
Q 042426          151 IDIYFENVGG  160 (270)
Q Consensus       151 ~d~v~d~~g~  160 (270)
                      +|+++.+.|.
T Consensus        84 id~lV~nag~   93 (274)
T d2pd4a1          84 LDFIVHSVAF   93 (274)
T ss_dssp             EEEEEECCCC
T ss_pred             CCeEEeeccc
Confidence            9999998873

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.37  E-value=0.00067  Score=51.71  Aligned_cols=102  Identities=17%  Similarity=0.134  Sum_probs=71.6

Q ss_pred             hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhC------CCceeecCCchhHHHHH
Q 042426           72 LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFG------FDDAFNYKEEPDLDAAL  143 (270)
Q Consensus        72 l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g------~~~vi~~~~~~~~~~~i  143 (270)
                      +....+++||++||=.|  +|.|.+++.+|+..|-  +|+.+..+++..+.+++.+.      .+++-....  +..+. 
T Consensus        88 Ii~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~--d~~~~-  162 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS--DLADS-  162 (264)
T ss_dssp             HHHHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS--CGGGC-
T ss_pred             HHHHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec--ccccc-
Confidence            33568899999999988  7889999999998864  99999999998888874221      122211111  21110 


Q ss_pred             HhHcCCCccEEEeCCCc--chHHHHHHccccCCEEEEE
Q 042426          144 NRCFPEGIDIYFENVGG--KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       144 ~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~  179 (270)
                       ....+.||.||--...  ..+..+.+.|+|+|+++.+
T Consensus       163 -~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~  199 (264)
T d1i9ga_         163 -ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVY  199 (264)
T ss_dssp             -CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEE
T ss_pred             -cccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEE
Confidence             0112369987765665  3888999999999999876

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.37  E-value=0.0012  Score=47.25  Aligned_cols=90  Identities=14%  Similarity=0.119  Sum_probs=61.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-------eecCC--chhHHHHHHhHcCCCcc
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-------FNYKE--EPDLDAALNRCFPEGID  152 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-------i~~~~--~~~~~~~i~~~~~~~~d  152 (270)
                      .+|.|+|+ |.+|++.+..+...|.+|++.++++++.+.++ +.+....       .....  ..+..+.+.+     +|
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-----aD   74 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ-DRGAIIAEGPGLAGTAHPDLLTSDIGLAVKD-----AD   74 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HHTSEEEESSSCCEEECCSEEESCHHHHHTT-----CS
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCCchhhhhhhhhhhhhhhhhhhHhHhcC-----CC
Confidence            57999998 99999999999999999999999999998887 5443111       00000  0134444433     89


Q ss_pred             EEEeCCCcchHHHH----HHccccCCEEEE
Q 042426          153 IYFENVGGKMLDAV----LLNMRICGHIAV  178 (270)
Q Consensus       153 ~v~d~~g~~~~~~~----~~~l~~~G~~v~  178 (270)
                      ++|-++........    ...+.++..++.
T Consensus        75 ~iii~v~~~~~~~~~~~i~~~l~~~~~iv~  104 (184)
T d1bg6a2          75 VILIVVPAIHHASIAANIASYISEGQLIIL  104 (184)
T ss_dssp             EEEECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred             EEEEEEchhHHHHHHHHhhhccCCCCEEEE
Confidence            99999987644444    445555555543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.36  E-value=0.0012  Score=47.06  Aligned_cols=96  Identities=16%  Similarity=0.104  Sum_probs=62.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +.+|+|.|| |.+|..+++.+...|.+|+++.++.++.+.+.+.++...+. .... .......... ...|.++.+...
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~-~~~~-~~~~~~~~~i-~~~~~~i~~~~~   77 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPI-SLDV-NDDAALDAEV-AKHDLVISLIPY   77 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEE-ECCT-TCHHHHHHHH-TTSSEEEECSCG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccc-cccc-cchhhhHhhh-hccceeEeeccc
Confidence            578999997 99999999999988999999999999999888555543222 2211 1111111111 126788877765


Q ss_pred             c-hHHHHHHccccCCEEEEEc
Q 042426          161 K-MLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       161 ~-~~~~~~~~l~~~G~~v~~g  180 (270)
                      . .......+++.+..++...
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~   98 (182)
T d1e5qa1          78 TFHATVIKSAIRQKKHVVTTS   98 (182)
T ss_dssp             GGHHHHHHHHHHHTCEEECSS
T ss_pred             hhhhHHHHHHHhhccceeecc
Confidence            4 3334444555556666543

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=97.35  E-value=0.00025  Score=54.94  Aligned_cols=106  Identities=11%  Similarity=0.096  Sum_probs=71.1

Q ss_pred             hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcC
Q 042426           72 LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        72 l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~  148 (270)
                      +.....+++|++||=+|  +|.|..+..+++..|++|++++.++...+.+++   ..|...-+..... ++.+ + ...+
T Consensus        59 l~~~~~l~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~-d~~~-l-~~~~  133 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLG--AGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYG-SFLE-I-PCED  133 (282)
T ss_dssp             HHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEEC-CTTS-C-SSCT
T ss_pred             HHHhcCCCCCCEEEEeC--CCCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccc-cccc-c-cccc
Confidence            44557889999999998  677888888998889999999999987776663   2344311211111 1111 0 0112


Q ss_pred             CCccEEEeCCC-----c--chHHHHHHccccCCEEEEEccc
Q 042426          149 EGIDIYFENVG-----G--KMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       149 ~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      +.||+|+..-.     .  ..+..+.++|+|+|+++.....
T Consensus       134 ~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~~  174 (282)
T d2o57a1         134 NSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM  174 (282)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             cccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEee
Confidence            36999976432     1  2678999999999999876543

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.34  E-value=0.0012  Score=44.70  Aligned_cols=75  Identities=17%  Similarity=0.184  Sum_probs=55.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      +|+|.|+ |.+|+.+++.+...|.+|+++..++++.+.+.++++.. ++. .+. .-.+.+.+..-..+|.++-++..+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~-Gd~-~~~~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VIN-GDC-TKIKTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEE-SCT-TSHHHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hcc-Ccc-cchhhhhhcChhhhhhhcccCCcH
Confidence            6899998 99999999999999999999999999999887566654 332 121 122334443334689999988875

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.00024  Score=56.08  Aligned_cols=102  Identities=19%  Similarity=0.217  Sum_probs=66.5

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhC--------------CCceeecCCch
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFG--------------FDDAFNYKEEP  137 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g--------------~~~vi~~~~~~  137 (270)
                      ...+++||++||=.|  +|.|.+++.+|+..|.  +|+.+..+++..+.+++.+.              .+++ +.... 
T Consensus        92 ~~l~i~pG~rVLE~G--tGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv-~~~~~-  167 (324)
T d2b25a1          92 SMMDINPGDTVLEAG--SGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV-DFIHK-  167 (324)
T ss_dssp             HHHTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCE-EEEES-
T ss_pred             HHhCCCCCCEEEEec--ccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccce-eEEec-
Confidence            557899999999988  5669999999998875  89999999988877764321              0111 11111 


Q ss_pred             hHHHHHHhHcCCCccEEEeCCCc--chHHHHHHccccCCEEEEE
Q 042426          138 DLDAALNRCFPEGIDIYFENVGG--KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       138 ~~~~~i~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~  179 (270)
                      ++.........+.||.||=-...  ..+..+.+.|+|||+++.+
T Consensus       168 di~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~  211 (324)
T d2b25a1         168 DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVY  211 (324)
T ss_dssp             CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEE
T ss_pred             chhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEE
Confidence            11111111111258877643444  3789999999999999876

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.00018  Score=54.00  Aligned_cols=100  Identities=7%  Similarity=-0.086  Sum_probs=67.3

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEE-E
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIY-F  155 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v-~  155 (270)
                      ..+|.+||-+|  +|.|..+..+++..+.+|+++..++.-.+.+++..... ..+..... +..........+.||.+ |
T Consensus        51 ~~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~fD~i~f  127 (229)
T d1zx0a1          51 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGILY  127 (229)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEEE
T ss_pred             ccCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccc-cccccccccccccccceee
Confidence            36788999998  78888899998877779999999999999888443221 11111111 33333333334478887 4


Q ss_pred             eCCCcc-----------hHHHHHHccccCCEEEEEc
Q 042426          156 ENVGGK-----------MLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       156 d~~g~~-----------~~~~~~~~l~~~G~~v~~g  180 (270)
                      |.....           .+..+.+.|+|||+++...
T Consensus       128 D~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~  163 (229)
T d1zx0a1         128 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  163 (229)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             cccccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence            655421           4566888999999998653

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.29  E-value=0.00071  Score=50.69  Aligned_cols=103  Identities=14%  Similarity=0.151  Sum_probs=69.9

Q ss_pred             HhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHc
Q 042426           71 GLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        71 ~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      .+...+.+++|++||=+|  +|.|..+..+++. +.+|++++.|+.-++.+++.   .+.+.+ ..... +..+ + ...
T Consensus         7 ~l~~~~~~~~~~rILDiG--cGtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~-~~~~~-d~~~-~-~~~   79 (234)
T d1xxla_           7 LMIKTAECRAEHRVLDIG--AGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENV-RFQQG-TAES-L-PFP   79 (234)
T ss_dssp             HHHHHHTCCTTCEEEEES--CTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSE-EEEEC-BTTB-C-CSC
T ss_pred             HHHHHhCCCCCCEEEEeC--CcCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccc-ccccc-cccc-c-ccc
Confidence            455778999999999998  7778888888874 68999999999877766533   344322 11111 1110 0 011


Q ss_pred             CCCccEEEeCCCc-------chHHHHHHccccCCEEEEEc
Q 042426          148 PEGIDIYFENVGG-------KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       148 ~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g  180 (270)
                      ++.||+|+.+-.-       ..+..+.+.|+|+|+++...
T Consensus        80 ~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          80 DDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            2369999875442       26888999999999988753

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.29  E-value=0.0018  Score=44.94  Aligned_cols=86  Identities=12%  Similarity=0.167  Sum_probs=66.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcch
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKM  162 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~  162 (270)
                      +|.++|. |.+|.+.+.-....|.++++..++.++.+.+.+++|....-      +..+.+.+     .|+||=|+-...
T Consensus         2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~------~~~~~~~~-----~dvIilavkp~~   69 (152)
T d2ahra2           2 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM------SHQDLIDQ-----VDLVILGIKPQL   69 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS------SHHHHHHT-----CSEEEECSCGGG
T ss_pred             EEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec------hhhhhhhc-----cceeeeecchHh
Confidence            5788986 99999988877777889999999999888887688865321      34444443     899999997777


Q ss_pred             HHHHHHccccCCEEEEEc
Q 042426          163 LDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       163 ~~~~~~~l~~~G~~v~~g  180 (270)
                      +...++.++++..++.+.
T Consensus        70 ~~~vl~~l~~~~~iis~~   87 (152)
T d2ahra2          70 FETVLKPLHFKQPIISMA   87 (152)
T ss_dssp             HHHHHTTSCCCSCEEECC
T ss_pred             HHHHhhhcccceeEeccc
Confidence            888888888887777653

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=97.24  E-value=0.00058  Score=51.34  Aligned_cols=92  Identities=18%  Similarity=0.121  Sum_probs=66.5

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      +.++.+||=.|  +|.|..+..+++ .|++|++++.+++..+.++ +-+....+..... ++.     ...+.||+|+..
T Consensus        40 ~~~~~~vLDiG--cG~G~~~~~l~~-~~~~v~giD~s~~~l~~a~-~~~~~~~~~~~~~-~l~-----~~~~~fD~ii~~  109 (246)
T d2avna1          40 LKNPCRVLDLG--GGTGKWSLFLQE-RGFEVVLVDPSKEMLEVAR-EKGVKNVVEAKAE-DLP-----FPSGAFEAVLAL  109 (246)
T ss_dssp             CCSCCEEEEET--CTTCHHHHHHHT-TTCEEEEEESCHHHHHHHH-HHTCSCEEECCTT-SCC-----SCTTCEEEEEEC
T ss_pred             cCCCCEEEEEC--CCCchhcccccc-cceEEEEeecccccccccc-ccccccccccccc-ccc-----cccccccceeee
Confidence            45778999888  678999988876 5899999999999999998 5555544443322 211     112369998865


Q ss_pred             CCc--------chHHHHHHccccCCEEEEE
Q 042426          158 VGG--------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       158 ~g~--------~~~~~~~~~l~~~G~~v~~  179 (270)
                      ...        ..+....++|+|||.++..
T Consensus       110 ~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         110 GDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             SSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            431        2577888999999988754

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.0019  Score=46.32  Aligned_cols=96  Identities=17%  Similarity=0.130  Sum_probs=60.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH---HHhCC-----CceeecCCchhHHHHHHhHcCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLK---HKFGF-----DDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~---~~~g~-----~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ++.+|+|+|+ |+.|.+++..+...|+ +++++.|++++.+.+.   ++++.     ....+..+..++.+.+.     .
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~   90 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA-----S   90 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----T
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc-----c
Confidence            5689999997 9999999998888898 8889998766544332   13321     12334443323333333     2


Q ss_pred             ccEEEeCCCcch-------HHHHHHccccCCEEEEEcc
Q 042426          151 IDIYFENVGGKM-------LDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       151 ~d~v~d~~g~~~-------~~~~~~~l~~~G~~v~~g~  181 (270)
                      +|++++|+.-..       +..-...++++..++.+-.
T Consensus        91 ~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y  128 (182)
T d1vi2a1          91 ADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVY  128 (182)
T ss_dssp             CSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCC
T ss_pred             cceeccccCCccccccchhhhhHHHhhhcchhhHHhhc
Confidence            899999986321       1112345667777777643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.23  E-value=0.00054  Score=52.29  Aligned_cols=80  Identities=21%  Similarity=0.244  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHH-HH--cCCEEEEEeCCHHHHHHHHHHhC---CC-----ceeecCCchhHHH---HHHh
Q 042426           80 KGEYVYVSAASGAVGQLVGQFV-KL--VGCYVVGSARSKEKVDLLKHKFG---FD-----DAFNYKEEPDLDA---ALNR  145 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la-~~--~g~~v~~~~~~~~~~~~~~~~~g---~~-----~vi~~~~~~~~~~---~i~~  145 (270)
                      .|..++|+||++|+|.++++.+ +.  .|++|+++.+++++++.+.+++.   ..     ...|..++++..+   .+.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3678899999999999887654 42  68999999999998887764442   11     1235555423332   3333


Q ss_pred             Hc--CC-CccEEEeCCC
Q 042426          146 CF--PE-GIDIYFENVG  159 (270)
Q Consensus       146 ~~--~~-~~d~v~d~~g  159 (270)
                      ..  .+ ..|+++++.|
T Consensus        85 ~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             hhhhccCceEEEEeccc
Confidence            22  22 6788888765

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.0039  Score=43.37  Aligned_cols=93  Identities=17%  Similarity=0.168  Sum_probs=70.7

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEE
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      .-+-.|.++.|.|- |-+|.-.++.++.+|++|+++...+.+.-.+. .-|.. +.      .+.+.+..     .|+++
T Consensus        19 ~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-~dG~~-v~------~~~~a~~~-----adivv   84 (163)
T d1li4a1          19 DVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINALQAA-MEGYE-VT------TMDEACQE-----GNIFV   84 (163)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHTTT-----CSEEE
T ss_pred             CceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchhHHhh-cCceE-ee------ehhhhhhh-----ccEEE
Confidence            33457899999995 99999999999999999999998886644444 44542 21      23333322     79999


Q ss_pred             eCCCcc--hHHHHHHccccCCEEEEEccc
Q 042426          156 ENVGGK--MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       156 d~~g~~--~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      -++|+.  .-...++.|+++..+..+|..
T Consensus        85 taTGn~~vI~~eh~~~MKdgaIL~N~Ghf  113 (163)
T d1li4a1          85 TTTGCIDIILGRHFEQMKDDAIVCNIGHF  113 (163)
T ss_dssp             ECSSCSCSBCHHHHTTCCTTEEEEECSSS
T ss_pred             ecCCCccchhHHHHHhccCCeEEEEeccc
Confidence            999974  567889999999999888763

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.19  E-value=0.00053  Score=52.09  Aligned_cols=96  Identities=18%  Similarity=0.142  Sum_probs=64.6

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      ..++|++||=.|  +|.|..++.+++ +|++|++++.+++..+.+++   ..|....+-.  . +....+   ..+.||+
T Consensus       117 ~~~~g~~VLDiG--cGsG~l~i~aa~-~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~--~-d~~~~~---~~~~fD~  187 (254)
T d2nxca1         117 HLRPGDKVLDLG--TGSGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLE--G-SLEAAL---PFGPFDL  187 (254)
T ss_dssp             HCCTTCEEEEET--CTTSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEE--S-CHHHHG---GGCCEEE
T ss_pred             hcCccCEEEEcc--cchhHHHHHHHh-cCCEEEEEECChHHHHHHHHHHHHcCCceeEEe--c-cccccc---cccccch
Confidence            367899999998  455777766554 68999999999988777763   2344322211  1 333222   1236999


Q ss_pred             EEeCCCcc----hHHHHHHccccCCEEEEEcc
Q 042426          154 YFENVGGK----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       154 v~d~~g~~----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      |+......    .+....+.|+|+|+++..|.
T Consensus       188 V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         188 LVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence            98765432    45677889999999998665

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.19  E-value=0.0014  Score=46.57  Aligned_cols=100  Identities=13%  Similarity=0.027  Sum_probs=62.3

Q ss_pred             HhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCC
Q 042426           71 GLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        71 ~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      ++.+.....++.+|+|.|+ ||.+.+++..+...+.+|+++.|+.++.+.+.+.++.. .+.....  +      +....
T Consensus         8 ~l~~~~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~--~------~~~~~   78 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM--D------SIPLQ   78 (171)
T ss_dssp             HHHHTTCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG--G------GCCCS
T ss_pred             HHHHcCCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhh--c------ccccc
Confidence            3433333446789999997 99999998888777779999999999988887666531 1111111  0      11112


Q ss_pred             CccEEEeCCCcchHH----HHHHccccCCEEEEE
Q 042426          150 GIDIYFENVGGKMLD----AVLLNMRICGHIAVC  179 (270)
Q Consensus       150 ~~d~v~d~~g~~~~~----~~~~~l~~~G~~v~~  179 (270)
                      .+|++++|+....-.    .....+.++..++.+
T Consensus        79 ~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~  112 (171)
T d1p77a1          79 TYDLVINATSAGLSGGTASVDAEILKLGSAFYDM  112 (171)
T ss_dssp             CCSEEEECCCC-------CCCHHHHHHCSCEEES
T ss_pred             ccceeeecccccccccccchhhhhhcccceeeee
Confidence            599999998743211    112334556666554

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.16  E-value=0.0022  Score=45.10  Aligned_cols=86  Identities=16%  Similarity=0.226  Sum_probs=59.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CceeecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGF-DDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      +|.|+|. |.+|...+..++..|.+|++.++++++.+.++ +.|. +...+.     . +.+.     ..|+||-|+...
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~-~~~~~~~~~~~-----~-~~~~-----~~DiIilavp~~   68 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-ERQLVDEAGQD-----L-SLLQ-----TAKIIFLCTPIQ   68 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTSCSEEESC-----G-GGGT-----TCSEEEECSCHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHH-Hhhccceeeee-----c-cccc-----ccccccccCcHh
Confidence            5889997 99999999888999999999999999999888 7775 322211     1 1121     388999888654


Q ss_pred             h----HHHHHHccccCCEEEEEcc
Q 042426          162 M----LDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       162 ~----~~~~~~~l~~~G~~v~~g~  181 (270)
                      .    ++.....+.++..++.++.
T Consensus        69 ~~~~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          69 LILPTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             hhhhhhhhhhhhcccccceeeccc
Confidence            3    3444444455555555543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=97.14  E-value=0.0006  Score=52.16  Aligned_cols=82  Identities=11%  Similarity=0.201  Sum_probs=56.2

Q ss_pred             CCCCcEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCC---ceeecCCch---hHHHHHHhHcC
Q 042426           78 PKKGEYVYVSAAS--GAVGQLVGQFVKLVGCYVVGSARSKEKV-DLLKHKFGFD---DAFNYKEEP---DLDAALNRCFP  148 (270)
Q Consensus        78 ~~~g~~vlI~ga~--g~vG~~ai~la~~~g~~v~~~~~~~~~~-~~~~~~~g~~---~vi~~~~~~---~~~~~i~~~~~  148 (270)
                      +-.|.++||+||+  .|+|.+.++.+...|++|+.+.++.++. +.+.++++..   ...|..+++   +..+.+.+...
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            3457899999964  4799999999999999999999877665 4455466643   223444432   23344444333


Q ss_pred             --CCccEEEeCCC
Q 042426          149 --EGIDIYFENVG  159 (270)
Q Consensus       149 --~~~d~v~d~~g  159 (270)
                        +..|++++++|
T Consensus        83 ~~~~ld~~i~~ag   95 (268)
T d2h7ma1          83 AGNKLDGVVHSIG   95 (268)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceeeeccc
Confidence              26899999987

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.11  E-value=0.00074  Score=50.32  Aligned_cols=71  Identities=24%  Similarity=0.207  Sum_probs=47.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      .+|||+||+|.+|..+++.+...|.  .|+...|++++.+.+.  -+... ..|..+..++.+.+.     ++|.|+.++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~-----~~d~vi~~a   76 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAFQ-----GIDALVILT   76 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHHT-----TCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc--CCcEEEEeeeccccccccccc-----cceeeEEEE
Confidence            4899999999999999999888784  6777888887665443  12221 223333312333322     489999887


Q ss_pred             C
Q 042426          159 G  159 (270)
Q Consensus       159 g  159 (270)
                      +
T Consensus        77 ~   77 (252)
T d2q46a1          77 S   77 (252)
T ss_dssp             C
T ss_pred             e
Confidence            6

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.10  E-value=0.001  Score=50.60  Aligned_cols=81  Identities=12%  Similarity=0.219  Sum_probs=52.9

Q ss_pred             CCCcEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCcee--ecCCchhHHHHHHhHcC--C
Q 042426           79 KKGEYVYVSAASG--AVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDAF--NYKEEPDLDAALNRCFP--E  149 (270)
Q Consensus        79 ~~g~~vlI~ga~g--~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~vi--~~~~~~~~~~~i~~~~~--~  149 (270)
                      -+|.++||+||++  |+|.+.+..+...|++|+.+.++++..+.+.+   ..+....+  +..+..+..+.+.+...  +
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            3578999999988  79999999999999999999988665444431   33333222  22222133333333322  3


Q ss_pred             CccEEEeCCC
Q 042426          150 GIDIYFENVG  159 (270)
Q Consensus       150 ~~d~v~d~~g  159 (270)
                      ..|+.+++++
T Consensus        83 ~~d~~v~~a~   92 (258)
T d1qsga_          83 KFDGFVHSIG   92 (258)
T ss_dssp             SEEEEEECCC
T ss_pred             ccceEEEeec
Confidence            6899998875

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=97.05  E-value=0.0054  Score=44.38  Aligned_cols=86  Identities=20%  Similarity=0.191  Sum_probs=62.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|..++++++.+|++|++.++.......   ..+..    .  . ++.+.+.+     .|+++-++.
T Consensus        42 ~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~---~~~~~----~--~-~l~~~l~~-----sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELE---KKGYY----V--D-SLDDLYKQ-----ADVISLHVP  105 (197)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HTTCB----C--S-CHHHHHHH-----CSEEEECSC
T ss_pred             cCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccc---cceee----e--c-cccccccc-----cccccccCC
Confidence            3789999997 999999999999999999998865433221   11211    1  1 45555555     799888775


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEcc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      . +     .-...++.|+++..++.++.
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccccHHHHhhhCCccEEEecCc
Confidence            2 1     33677889999999998866

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.05  E-value=0.0021  Score=48.84  Aligned_cols=36  Identities=17%  Similarity=0.193  Sum_probs=32.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK  117 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~  117 (270)
                      .+.||+||++|+|.+.++.+...|++|+.+.++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~   37 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG   37 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            367999999999999999999999999999987554

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=97.04  E-value=0.0025  Score=47.30  Aligned_cols=102  Identities=14%  Similarity=0.097  Sum_probs=71.7

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhH---
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRC---  146 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~---  146 (270)
                      +.+.....+||-+|  +++|..++.+|+.+.  .+++.+..+++..+.+++   +.|..+-+..... +..+.+.+.   
T Consensus        54 L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g-~a~~~L~~l~~~  130 (227)
T d1susa1          54 LLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKD  130 (227)
T ss_dssp             HHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHC
T ss_pred             HHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeeh-HHHHHHHHHHhc
Confidence            34455568899998  899999999998874  699999999887777763   3466544444333 444444443   


Q ss_pred             --cCCCccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426          147 --FPEGIDIYFENVGG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       147 --~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                        ..+.||+||=-...    ..++.++++|++||.++.=
T Consensus       131 ~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         131 EKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             GGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             cccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEc
Confidence              23479998754332    2788999999999998864

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.03  E-value=0.0042  Score=42.95  Aligned_cols=82  Identities=23%  Similarity=0.313  Sum_probs=56.7

Q ss_pred             EEEEecCCchHHHHHHH-HHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQ-FVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~-la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      +|.++|+ |.+|.+.++ +.+.-+.+|++..+++++.+.+.+++|.. +.+..+  .    +     ...|+||=|+--.
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~--~----v-----~~~Div~lavkP~   68 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE-TSATLP--E----L-----HSDDVLILAVKPQ   68 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE-EESSCC--C----C-----CTTSEEEECSCHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc-cccccc--c----c-----cccceEEEecCHH
Confidence            5889997 999998887 45554479999999999999888677763 222111  1    1     1268888777655


Q ss_pred             hHHHHHHccccCCEEE
Q 042426          162 MLDAVLLNMRICGHIA  177 (270)
Q Consensus       162 ~~~~~~~~l~~~G~~v  177 (270)
                      .+...++-+++.++++
T Consensus        69 ~~~~v~~~l~~~~~~v   84 (152)
T d1yqga2          69 DMEAACKNIRTNGALV   84 (152)
T ss_dssp             HHHHHHTTCCCTTCEE
T ss_pred             HHHHhHHHHhhcccEE
Confidence            6666666666655544

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.0016  Score=48.51  Aligned_cols=103  Identities=14%  Similarity=0.077  Sum_probs=68.6

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-------------------eecC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-------------------FNYK  134 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-------------------i~~~  134 (270)
                      ....+.++.+||..|  +|.|..+..+|+ .|++|++++.|+.-.+.++++.+....                   ++..
T Consensus        39 ~~l~~~~~~rvLd~G--CG~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPL--CGKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETT--CTTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeC--CCCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            334577889999998  777898888886 599999999999999888755543211                   0000


Q ss_pred             CchhHHHHHHhHcCCCccEEEeCCCc---------chHHHHHHccccCCEEEEEcc
Q 042426          135 EEPDLDAALNRCFPEGIDIYFENVGG---------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       135 ~~~~~~~~i~~~~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .. ++.. +.....+.+|+|+++..-         ..+....++|+|+|+++....
T Consensus       116 ~~-d~~~-l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         116 CC-SIFD-LPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             ES-CGGG-GGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             Ec-chhh-ccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence            00 1110 111112368999987641         156788999999999876544

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=96.93  E-value=0.0013  Score=50.62  Aligned_cols=40  Identities=15%  Similarity=0.171  Sum_probs=32.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARS-KEKVDLLK  122 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~-~~~~~~~~  122 (270)
                      .++|+||++|+|.+.++.+...|++|++.+++ +++.+.+.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~   44 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS   44 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH
Confidence            57999999999999999999999999987754 44554444

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.93  E-value=0.015  Score=41.50  Aligned_cols=87  Identities=24%  Similarity=0.256  Sum_probs=63.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.++.|.|. |.+|...+++++.+|.+|++..+........  ..+..    +.   ++.+.+.+     .|+|.-++.
T Consensus        43 ~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~--~~~~~----~~---~l~ell~~-----sDiv~~~~P  107 (184)
T d1ygya1          43 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAA--QLGIE----LL---SLDDLLAR-----ADFISVHLP  107 (184)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHH--HHTCE----EC---CHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHh--hcCce----ec---cHHHHHhh-----CCEEEEcCC
Confidence            4679999997 9999999999999999999998765443332  33332    11   45555555     789888765


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEcc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      . +     .-...++.|+++..++.++.
T Consensus       108 lt~~T~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         108 KTPETAGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCchhhhhhhHHHHhhhCCCceEEEecc
Confidence            2 2     23578889999999999876

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.92  E-value=0.0018  Score=48.08  Aligned_cols=101  Identities=14%  Similarity=0.186  Sum_probs=67.6

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeecCCchhHHHHHHhHcCCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      +.++++++++||=+|  +|.|..+..+++. |.+|++++.+++-.+.+++.   .+..++ .+... +..+ + ....+.
T Consensus         9 ~~~~l~~~~rVLDiG--cG~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i-~~~~~-d~~~-l-~~~~~~   81 (231)
T d1vl5a_           9 QIAALKGNEEVLDVA--TGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQV-EYVQG-DAEQ-M-PFTDER   81 (231)
T ss_dssp             HHHTCCSCCEEEEET--CTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEEC-CC-C-C-CSCTTC
T ss_pred             HhcCCCCcCEEEEec--ccCcHHHHHHHHh-CCEEEEEECCHHHHhhhhhcccccccccc-ccccc-cccc-c-cccccc
Confidence            668899999999999  5678777777754 78999999999877776532   344322 11111 1110 1 011236


Q ss_pred             ccEEEeCCC-----c--chHHHHHHccccCCEEEEEcc
Q 042426          151 IDIYFENVG-----G--KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       151 ~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ||+|+..-.     .  ..+..+.++|+|||+++....
T Consensus        82 fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~  119 (231)
T d1vl5a_          82 FHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  119 (231)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccccccccCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            999986543     1  268899999999999987643

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.91  E-value=0.0025  Score=51.58  Aligned_cols=104  Identities=19%  Similarity=0.280  Sum_probs=68.9

Q ss_pred             HHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH----------hCCC---ceee--
Q 042426           69 YGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHK----------FGFD---DAFN--  132 (270)
Q Consensus        69 ~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~----------~g~~---~vi~--  132 (270)
                      ..++ +..++++|++++=+|  +|+|..+.++|+..|+ +|+++..++...+.+++.          ++..   ..+.  
T Consensus       206 ~~Il-~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~  282 (406)
T d1u2za_         206 SDVY-QQCQLKKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK  282 (406)
T ss_dssp             HHHH-HHTTCCTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred             HHHH-HHhCCCCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeee
Confidence            3344 567899999999998  8999999999999987 899999998877666522          1111   0111  


Q ss_pred             --cCCchhHHHHHHhHcCCCccEEEeCCC--c----chHHHHHHccccCCEEEEEc
Q 042426          133 --YKEEPDLDAALNRCFPEGIDIYFENVG--G----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       133 --~~~~~~~~~~i~~~~~~~~d~v~d~~g--~----~~~~~~~~~l~~~G~~v~~g  180 (270)
                        ..+...+...+.     .+|+++-...  .    ..+....+.|+|||+++...
T Consensus       283 ~~f~~~~~~d~~~~-----~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         283 KSFVDNNRVAELIP-----QCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SCSTTCHHHHHHGG-----GCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             echhhccccccccc-----cceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence              111101222222     2677764321  1    25778888999999999864

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.80  E-value=0.003  Score=48.86  Aligned_cols=38  Identities=11%  Similarity=0.227  Sum_probs=33.1

Q ss_pred             CCcEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHH
Q 042426           80 KGEYVYVSAASG--AVGQLVGQFVKLVGCYVVGSARSKEK  117 (270)
Q Consensus        80 ~g~~vlI~ga~g--~vG~~ai~la~~~g~~v~~~~~~~~~  117 (270)
                      +|.++||+||+|  |+|.+.++.+...|++|++..+++..
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            478999999876  89999999999999999999876543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.80  E-value=0.016  Score=40.09  Aligned_cols=92  Identities=20%  Similarity=0.192  Sum_probs=71.2

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      -+-.|.+++|.|= |-+|.-.++.++.+|++|+++..++-+.-++. .-|.. +.      ...+.+..     .|+++-
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-mdGf~-v~------~~~~a~~~-----aDi~vT   84 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFN-VV------TLDEIVDK-----GDFFIT   84 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHTTT-----CSEEEE
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHH-hcCCc-cC------chhHcccc-----CcEEEE
Confidence            3467899999997 99999999999999999999998886544443 33432 22      34444433     799999


Q ss_pred             CCCcc--hHHHHHHccccCCEEEEEccc
Q 042426          157 NVGGK--MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       157 ~~g~~--~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      ++|..  .....++.|+++..+..+|-.
T Consensus        85 aTGn~~vI~~~h~~~MKdgaIl~N~GHf  112 (163)
T d1v8ba1          85 CTGNVDVIKLEHLLKMKNNAVVGNIGHF  112 (163)
T ss_dssp             CCSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             cCCCCccccHHHHHHhhCCeEEEecccc
Confidence            99985  467889999999999998763

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.77  E-value=0.002  Score=47.96  Aligned_cols=101  Identities=16%  Similarity=0.139  Sum_probs=67.4

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhCC-Cce--eecCCchhHHHHHHhHcC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLKHKFGF-DDA--FNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~~~~g~-~~v--i~~~~~~~~~~~i~~~~~  148 (270)
                      ....++||++||=.|  .|.|..+..+++..|  .+|+++..+++..+.+++.... ..+  +....  ........ ..
T Consensus        67 ~~l~i~pG~~VLDlG--aGsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~--~~~~~~~~-~~  141 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLG--IASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA--TKPEEYRA-LV  141 (227)
T ss_dssp             CCCCCCTTCEEEEET--TTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT--TCGGGGTT-TC
T ss_pred             cccccCCCCEEEEec--cCCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEEC--CCcccccc-cc
Confidence            345789999999998  567888889999886  4999999999988888744332 111  11111  11111111 11


Q ss_pred             CCccEEEeCCCc-----chHHHHHHccccCCEEEEE
Q 042426          149 EGIDIYFENVGG-----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       149 ~~~d~v~d~~g~-----~~~~~~~~~l~~~G~~v~~  179 (270)
                      ..+|+++.....     ..+..+.+.|+++|+++.+
T Consensus       142 ~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            258888765542     2578888999999998865

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.74  E-value=0.015  Score=41.79  Aligned_cols=89  Identities=9%  Similarity=0.081  Sum_probs=63.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.++.|+|. |.+|...+++++.+|.+|+..++.....+... ..+..    +..  ++.+.+.+     .|+|.-+..
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~----~~~--~l~~ll~~-----sD~v~l~~p  112 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-SYQAT----FHD--SLDSLLSV-----SQFFSLNAP  112 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-HHTCE----ECS--SHHHHHHH-----CSEEEECCC
T ss_pred             cccceEEeec-ccchHHHHHHHHhhccccccccccccccchhh-ccccc----ccC--CHHHHHhh-----CCeEEecCC
Confidence            3789999997 99999999999999999999886544333222 22221    111  45555555     788887665


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEcc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      . +     .-...++.|+++..+|.++.
T Consensus       113 lt~~T~~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CCchHhheecHHHhhCcCCccEEEecCC
Confidence            2 1     33578889999999999876

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.0037  Score=46.10  Aligned_cols=103  Identities=12%  Similarity=0.052  Sum_probs=71.5

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhH--
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRC--  146 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~--  146 (270)
                      .+.+.....+||=+|  ++.|.+++.+|+.+  +.+|+.+..+++..+.+++   +.|....+..... +..+.+.+.  
T Consensus        53 ~L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~G-da~e~l~~~~~  129 (219)
T d2avda1          53 NLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLA  129 (219)
T ss_dssp             HHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred             HHHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEe-ehhhcchhhhh
Confidence            445556668999998  88899999999876  4699999999887766663   3465443444333 333333332  


Q ss_pred             --cCCCccEEEeCCCc----chHHHHHHccccCCEEEEE
Q 042426          147 --FPEGIDIYFENVGG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       147 --~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                        ..+.||+||--...    ..++.++++|++||.++.=
T Consensus       130 ~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~D  168 (219)
T d2avda1         130 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVL  168 (219)
T ss_dssp             TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEe
Confidence              23379998765443    2678999999999998874

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.70  E-value=0.0025  Score=46.80  Aligned_cols=101  Identities=11%  Similarity=0.140  Sum_probs=63.4

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC-Cce--eecCCchhHHHHHHhHcCCC
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF-DDA--FNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~-~~v--i~~~~~~~~~~~i~~~~~~~  150 (270)
                      ...++||++||=.|  +|.|..+..+++..+. +|++++.+++..+.+++.... .++  +..... +. .... .....
T Consensus        51 ~l~lkpg~~VLDlG--cG~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~-~~-~~~~-~~~~~  125 (209)
T d1nt2a_          51 RLKLRGDERVLYLG--AASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDAS-KP-WKYS-GIVEK  125 (209)
T ss_dssp             CCCCCSSCEEEEET--CTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTT-CG-GGTT-TTCCC
T ss_pred             cCCCCCCCEEEEeC--CcCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeecc-Cc-cccc-cccce
Confidence            35689999999999  4556677777877753 999999999888777633211 111  111111 10 0000 11114


Q ss_pred             ccEEEeCCCc-----chHHHHHHccccCCEEEEEc
Q 042426          151 IDIYFENVGG-----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       151 ~d~v~d~~g~-----~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +|+++.....     ..+..+.+.|+|+|+++.+-
T Consensus       126 vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         126 VDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            7777765432     25778889999999998764

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.014  Score=45.70  Aligned_cols=101  Identities=17%  Similarity=0.232  Sum_probs=69.2

Q ss_pred             hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH----------hCCC--ce--e--ecC
Q 042426           72 LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHK----------FGFD--DA--F--NYK  134 (270)
Q Consensus        72 l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~----------~g~~--~v--i--~~~  134 (270)
                      +.+..+++++++++=.|  +|.|..+.++|+..++ +++++..++...+.+++.          +|..  .+  +  |..
T Consensus       143 ~~~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred             HHHHcCCCCCCEEEEcC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence            33667899999999998  8999999999999887 799999998766665421          2221  11  1  222


Q ss_pred             CchhHHHHHHhHcCCCccEEEeCCC--c----chHHHHHHccccCCEEEEEc
Q 042426          135 EEPDLDAALNRCFPEGIDIYFENVG--G----KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       135 ~~~~~~~~i~~~~~~~~d~v~d~~g--~----~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +. .+.+.+.+     +|+|+-..-  .    ..+....+.|+|||++|...
T Consensus       221 ~~-~~~~~~~~-----advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         221 SE-EWRERIAN-----TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             SH-HHHHHHHH-----CSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cc-ccccccCc-----ceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            22 34444433     678774222  1    25677888999999999764

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.67  E-value=0.015  Score=41.79  Aligned_cols=88  Identities=20%  Similarity=0.158  Sum_probs=62.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.++.|+|. |.+|...+++++.+|++|+..++...... .. ..+...    ..  ++.+.+.+     .|+|.-+..
T Consensus        48 ~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~-~~-~~~~~~----~~--~l~~ll~~-----sD~i~~~~p  113 (193)
T d1mx3a1          48 RGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGV-ER-ALGLQR----VS--TLQDLLFH-----SDCVTLHCG  113 (193)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTH-HH-HHTCEE----CS--SHHHHHHH-----CSEEEECCC
T ss_pred             eCceEEEecc-ccccccceeeeeccccceeeccCcccccc-hh-hhcccc----cc--chhhcccc-----CCEEEEeec
Confidence            5789999997 99999999999999999999986543222 22 334321    11  45555554     788877665


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEcc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      . +     .-...++.|+++..++.++.
T Consensus       114 lt~~T~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         114 LNEHNHHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             CCTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred             ccccchhhhhHHHHhccCCCCeEEecCC
Confidence            2 1     23567889999999998876

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.61  E-value=0.0093  Score=38.85  Aligned_cols=89  Identities=8%  Similarity=0.002  Sum_probs=59.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceee--cCCchhHHHHHHhHcCCCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE-KVDLLKHKFGFDDAFN--YKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~-~~~~~~~~~g~~~vi~--~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      |.+|||.|+ |.+|..-++.+...|++|++++.... ....+.++-+.. ...  ++.. ++         .++++|+-+
T Consensus        12 ~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~-~~~~~~~~~-dl---------~~~~lv~~a   79 (113)
T d1pjqa1          12 DRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLT-LVEGPFDET-LL---------DSCWLAIAA   79 (113)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCE-EEESSCCGG-GG---------TTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCce-eeccCCCHH-Hh---------CCCcEEeec
Confidence            679999998 99999999999999999888875332 222222122221 111  1111 11         148999999


Q ss_pred             CCcchH-HHHHHccccCCEEEEEcc
Q 042426          158 VGGKML-DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       158 ~g~~~~-~~~~~~l~~~G~~v~~g~  181 (270)
                      .+...+ .......++.|.+|.+..
T Consensus        80 t~d~~~n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          80 TDDDTVNQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEeCC
Confidence            988655 466678888899998643

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.60  E-value=0.0025  Score=45.83  Aligned_cols=43  Identities=19%  Similarity=0.290  Sum_probs=37.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF  125 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~  125 (270)
                      +|.|+||+|++|.++++.+...|.+|++..|++++.+.+.++.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            5889988899999999999999999999999999887776444

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.57  E-value=0.006  Score=41.16  Aligned_cols=53  Identities=17%  Similarity=0.152  Sum_probs=33.2

Q ss_pred             EEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHhCCCceeecCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKL-VGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEE  136 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~-~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~  136 (270)
                      +|.|.|++|-+|+.+++.... .+.++.......+...... .-++|-++|++.+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~-~~~~DvvIDFS~p   54 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLT-DGNTEVVIDFTHP   54 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHH-TTTCSEEEECCCT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhc-cccCCEEEEcccH
Confidence            589999999999999988754 5678777664333333332 2234444444444

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.53  E-value=0.022  Score=40.73  Aligned_cols=89  Identities=15%  Similarity=0.015  Sum_probs=63.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .+.++.|.|. |.+|...+++++.+|.+|+...+........+ ..+...   ..   ++.+.+.+     .|+|.-+..
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~~---~~---~l~~~l~~-----sD~v~~~~p  109 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTW---HA---TREDMYPV-----CDVVTLNCP  109 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEE---CS---SHHHHGGG-----CSEEEECSC
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccc-cccccc---cC---CHHHHHHh-----ccchhhccc
Confidence            4779999997 99999999999999999999997544444433 444321   11   34444433     788877665


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEcc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      - +     .-...++.|+++..+|.++.
T Consensus       110 lt~~T~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         110 LHPETEHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             ccccchhhhHHHHHHhCCCCCEEEecCc
Confidence            2 1     34678888988888888866

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.50  E-value=0.0053  Score=45.66  Aligned_cols=101  Identities=9%  Similarity=0.104  Sum_probs=63.9

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC-Cce--eecCCchhHHHHHHhHcCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGF-DDA--FNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~-~~v--i~~~~~~~~~~~i~~~~~~  149 (270)
                      ....++||++||=.|  .|.|..+..+++... .+|++++.+++-.+.+++.... ..+  +..... ... ..... ..
T Consensus        68 ~~l~ikpG~~VLDlG--cGsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~-~~~-~~~~~-~~  142 (230)
T d1g8sa_          68 KVMPIKRDSKILYLG--ASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-KPQ-EYANI-VE  142 (230)
T ss_dssp             CCCCCCTTCEEEEES--CCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-CGG-GGTTT-CC
T ss_pred             HhCCCCCCCEEEEeC--EEcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeec-cCc-ccccc-cc
Confidence            345789999999999  456677777787643 4999999999988888733222 111  111111 111 11111 11


Q ss_pred             CccEEEeCCCc-----chHHHHHHccccCCEEEEE
Q 042426          150 GIDIYFENVGG-----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       150 ~~d~v~d~~g~-----~~~~~~~~~l~~~G~~v~~  179 (270)
                      .+|+++.....     ..+..+.+.|+|+|.++..
T Consensus       143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~  177 (230)
T d1g8sa_         143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeEEeeccccchHHHHHHHHHHHHhcccCceEEEE
Confidence            46667665542     1577888899999998865

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.48  E-value=0.002  Score=40.61  Aligned_cols=35  Identities=17%  Similarity=0.122  Sum_probs=31.2

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      +|.+|+|+|. |..|+++++++...|++|++.+.+.
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~   38 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRM   38 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSS
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCc
Confidence            3578999998 9999999999999999999999644

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.45  E-value=0.015  Score=45.66  Aligned_cols=39  Identities=3%  Similarity=-0.022  Sum_probs=32.0

Q ss_pred             CcEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 042426           81 GEYVYVSAA--SGAVGQLVGQFVKLVGCYVVGSARSKEKVD  119 (270)
Q Consensus        81 g~~vlI~ga--~g~vG~~ai~la~~~g~~v~~~~~~~~~~~  119 (270)
                      ++..||+|+  +.|+|.+.++.+...|++|+++.++.....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~   42 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNI   42 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhh
Confidence            467899994  469999999999999999999987665433

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=96.44  E-value=0.004  Score=49.19  Aligned_cols=47  Identities=32%  Similarity=0.335  Sum_probs=40.5

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK  122 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~  122 (270)
                      .-+++|.+|||+||+|=+|..+++.+...|++|++++|+..+.+.++
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ   52 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence            34678999999999999999999888888999999999887766655

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.40  E-value=0.017  Score=41.80  Aligned_cols=85  Identities=21%  Similarity=0.242  Sum_probs=60.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|..++++++.+|++|++.++...+        +....+.+.   ++.+.+.+     .|++.-++.
T Consensus        44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~--------~~~~~~~~~---~l~~l~~~-----~D~v~~~~p  106 (199)
T d1dxya1          44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMK--------GDHPDFDYV---SLEDLFKQ-----SDVIDLHVP  106 (199)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS--------SCCTTCEEC---CHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeeec-ccccccccccccccceeeeccCCccch--------hhhcchhHH---HHHHHHHh-----cccceeeec
Confidence            3679999997 999999999999999999999865321        111112222   44444444     788877664


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEcc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      . +     .-...++.|+++..++.++.
T Consensus       107 lt~~T~~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         107 GIEQNTHIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             CCGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccccHHHhhccCCceEEEeccc
Confidence            2 2     23577888999999998876

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=96.39  E-value=0.047  Score=37.26  Aligned_cols=97  Identities=18%  Similarity=0.143  Sum_probs=61.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCC--HHHHHHHHHHhCCCceeecCCchhHH---HH------------
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARS--KEKVDLLKHKFGFDDAFNYKEEPDLD---AA------------  142 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~--~~~~~~~~~~~g~~~vi~~~~~~~~~---~~------------  142 (270)
                      .+|.|+|+||++|..+.++.+..  .++|++.+..  -+.+....++|....++-..+. ...   ..            
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~-~~~~l~~~~~~~~~~v~~g~   81 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPS-LYNDLKEALAGSSVEAAAGA   81 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGG-GHHHHHHHTTTCSSEEEESH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHH-HHHHHHHHhhhcccccccCc
Confidence            68999999999999999999876  4677777643  2333322237777655433221 111   11            


Q ss_pred             --HHhHcCCCccEEEeCCCc-chHHHHHHccccCCEEEEE
Q 042426          143 --LNRCFPEGIDIYFENVGG-KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       143 --i~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  179 (270)
                        +.+.....+|+++.+..+ .-+.-.+..++.+-++...
T Consensus        82 ~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA  121 (150)
T d1r0ka2          82 DALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA  121 (150)
T ss_dssp             HHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             cchheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence              111112247888888644 6777888888887776554

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.39  E-value=0.0057  Score=45.88  Aligned_cols=95  Identities=15%  Similarity=0.123  Sum_probs=63.1

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHc-CC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCF-PE  149 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~-~~  149 (270)
                      ......+..+||=.|  +|.|..+..+++ .|++|++++.+++-.+.+++..   +..  +..... +    +.+.. ++
T Consensus        35 ~~~~~~~~~~iLDiG--cGtG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~--i~~~~~-d----~~~l~~~~  104 (251)
T d1wzna1          35 KEDAKREVRRVLDLA--CGTGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLK--IEFLQG-D----VLEIAFKN  104 (251)
T ss_dssp             HHTCSSCCCEEEEET--CTTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCC--CEEEES-C----GGGCCCCS
T ss_pred             HHhcCCCCCEEEEeC--CCCCccchhhcc-cceEEEEEeecccccccccccccccccc--chheeh-h----hhhccccc
Confidence            344566778899998  556888887776 5899999999998888877443   222  111111 1    11222 23


Q ss_pred             CccEEEeCCCc----------chHHHHHHccccCCEEEE
Q 042426          150 GIDIYFENVGG----------KMLDAVLLNMRICGHIAV  178 (270)
Q Consensus       150 ~~d~v~d~~g~----------~~~~~~~~~l~~~G~~v~  178 (270)
                      .||+|+...+.          ..++.+.++|+|+|.++.
T Consensus       105 ~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         105 EFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             CEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            69998875432          257788899999998875

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.38  E-value=0.0017  Score=47.92  Aligned_cols=94  Identities=16%  Similarity=0.057  Sum_probs=62.3

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ceeecCCchhHHHHHHhHcCCCcc
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFD-DAFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      .++++++||-+|  +|.|..+..+++ .|.+|++++.|++-.+.+++..   +.. ..+..... ++.     ...+.||
T Consensus        34 ~l~~~~~ILDiG--cG~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~-~l~-----~~~~~fD  104 (226)
T d1ve3a1          34 YMKKRGKVLDLA--CGVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KLS-----FEDKTFD  104 (226)
T ss_dssp             SCCSCCEEEEET--CTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SCC-----SCTTCEE
T ss_pred             hcCCCCEEEEEC--CCcchhhhhHhh-hhcccccccccccchhhhhhhhccccccccccccccc-ccc-----ccCcCce
Confidence            367889999998  677888888886 4889999999999887777432   322 11111111 110     1113689


Q ss_pred             EEEeCCCc---------chHHHHHHccccCCEEEEE
Q 042426          153 IYFENVGG---------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       153 ~v~d~~g~---------~~~~~~~~~l~~~G~~v~~  179 (270)
                      +|+....-         ..++.+.+.|+|||+++..
T Consensus       105 ~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             EEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            98764331         1577889999999998754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.37  E-value=0.016  Score=40.53  Aligned_cols=88  Identities=11%  Similarity=0.107  Sum_probs=59.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCC-CceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFGF-DDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +|+|+|. |.+|.+.+..++..|.  +|++.+++++..+.++ +.+. +........         ......|+++-|+.
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~-~~~~~~~~~~~~~~---------~~~~~~dlIila~p   71 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIAK---------VEDFSPDFVMLSSP   71 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCGGG---------GGGTCCSEEEECSC
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH-Hhhcchhhhhhhhh---------hhccccccccccCC
Confidence            6999996 9999999998888885  8999999999999998 7765 322211110         00113788888877


Q ss_pred             cc----hHHHHHHccccCCEEEEEcc
Q 042426          160 GK----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~~----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ..    .+....+.+.++..+..++.
T Consensus        72 ~~~~~~vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          72 VRTFREIAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             chhhhhhhhhhhcccccccccccccc
Confidence            53    34444555666666666654

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.35  E-value=0.0022  Score=49.70  Aligned_cols=97  Identities=13%  Similarity=0.026  Sum_probs=62.1

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeecCCchhHHHHHHhHcCC-C
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDD---AFNYKEEPDLDAALNRCFPE-G  150 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---vi~~~~~~~~~~~i~~~~~~-~  150 (270)
                      .+++.+||=+|  +|.|..++.+++. |++|++++.|++-++.+++..   +...   ..+..+. ++...-.+...+ .
T Consensus        54 ~~~~~~vLD~G--cG~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  129 (292)
T d1xvaa_          54 QHGCHRVLDVA--CGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA-NWLTLDKDVPAGDG  129 (292)
T ss_dssp             HTTCCEEEESS--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC-CGGGHHHHSCCTTC
T ss_pred             hcCCCEEEEec--CCCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeec-cccccccccCCCCC
Confidence            34567899888  7888888888875 899999999998887776332   2210   0111111 121111222223 7


Q ss_pred             ccEEEeCCCc---------------chHHHHHHccccCCEEEE
Q 042426          151 IDIYFENVGG---------------KMLDAVLLNMRICGHIAV  178 (270)
Q Consensus       151 ~d~v~d~~g~---------------~~~~~~~~~l~~~G~~v~  178 (270)
                      ||.|+.....               ..++.+.+.|+|||.++.
T Consensus       130 fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         130 FDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             EEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             ceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            9988864321               157889999999999886

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.28  E-value=0.0035  Score=41.97  Aligned_cols=30  Identities=20%  Similarity=0.141  Sum_probs=26.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSA  112 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~  112 (270)
                      +|.|+|++|-+|++..+++...+.+++...
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~i   31 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKV   31 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence            589999999999999999998888776654

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.27  E-value=0.0095  Score=46.70  Aligned_cols=101  Identities=17%  Similarity=0.146  Sum_probs=64.7

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhH--cCCC
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRC--FPEG  150 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~--~~~~  150 (270)
                      .+++|++||=.+  +++|..++..++. |+ +|+.++.+++..+.+++   ..|....+..... +..+.+...  .++.
T Consensus       142 ~~~~g~~VLDl~--~g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~-d~~~~~~~~~~~~~~  217 (324)
T d2as0a2         142 WVQPGDRVLDVF--TYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG-SAFEEMEKLQKKGEK  217 (324)
T ss_dssp             GCCTTCEEEETT--CTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHTTCC
T ss_pred             hcCCCCeeeccc--Ccccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeec-hhhhhhHHHHhccCC
Confidence            367899998877  4566666666654 66 89999999998887763   3454322222222 444444332  2237


Q ss_pred             ccEEEeCCC---c-------------chHHHHHHccccCCEEEEEcc
Q 042426          151 IDIYFENVG---G-------------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       151 ~d~v~d~~g---~-------------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ||+|+--..   .             ..+..++++|+|||.++.+.+
T Consensus       218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~  264 (324)
T d2as0a2         218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC  264 (324)
T ss_dssp             EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred             CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            999875222   1             145677889999999998765

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.00076  Score=50.48  Aligned_cols=74  Identities=20%  Similarity=0.263  Sum_probs=46.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      +.+|||+||||-+|..+++.+...|.  +|++++|++.+...-. .-... ...|..+.    +.+.+... ++|+++.|
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-~~~i~~~~~D~~~~----~~~~~~~~-~~d~vi~~   87 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKL----DDYASAFQ-GHDVGFCC   87 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGG----GGGGGGGS-SCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-cceeeeeeeccccc----cccccccc-cccccccc
Confidence            36899999999999999998877775  8999998654322111 11111 12233222    12222222 59999999


Q ss_pred             CCc
Q 042426          158 VGG  160 (270)
Q Consensus       158 ~g~  160 (270)
                      +|.
T Consensus        88 ~~~   90 (232)
T d2bkaa1          88 LGT   90 (232)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            884

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.23  E-value=0.021  Score=38.22  Aligned_cols=73  Identities=16%  Similarity=0.149  Sum_probs=52.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      +++|.|+ |.+|..+++.+...|.+|+++..++++.+.++ ..+...+ -|..++ +..+.   ..-..+|.++-+++..
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~-~~~~~~~~gd~~~~-~~l~~---a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEE-NELLS---LGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT-TTCSEEEECCTTCT-THHHH---HTGGGCSEEEECCCSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH-HhCCcceeeecccc-hhhhc---cCCccccEEEEEcCch
Confidence            4678887 99999999999999999999999999999887 6665432 233333 33322   2112488888877753

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.22  E-value=0.023  Score=39.46  Aligned_cols=86  Identities=13%  Similarity=0.110  Sum_probs=61.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-  161 (270)
                      +|.|+|. |.+|...++-+...|.+|++..+++++.+.++ +.+.. +.+     +..+.+++     .|++|-|+..+ 
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~-~~~-----~~~e~~~~-----~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAE-TAS-----TAKAIAEQ-----CDVIITMLPNSP   68 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECS-----SHHHHHHH-----CSEEEECCSSHH
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH-Hhhhh-hcc-----cHHHHHhC-----CCeEEEEcCCHH
Confidence            5888996 99999999888888999999999999999988 66653 211     34444444     89999998753 


Q ss_pred             hHHH-------HHHccccCCEEEEEcc
Q 042426          162 MLDA-------VLLNMRICGHIAVCGM  181 (270)
Q Consensus       162 ~~~~-------~~~~l~~~G~~v~~g~  181 (270)
                      ..+.       ....++++..++.++.
T Consensus        69 ~v~~v~~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          69 HVKEVALGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHhCCcchhhccCCCCEEEECCC
Confidence            3333       3445566667766644

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=96.21  E-value=0.0083  Score=47.38  Aligned_cols=78  Identities=17%  Similarity=0.280  Sum_probs=50.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CC-ceeecCCchhHHHHHHhHcCCCccEE
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG----FD-DAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g----~~-~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      .+.+|||+||+|=+|..+++.+...|.+|++++++..+...+.+...    .. ...|.++...+.+.+...   .+|++
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~---~~~~v   83 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIV   83 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc---hhhhh
Confidence            46899999999999999999999999999999986653322221221    11 112334431222333221   47899


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      +.+++.
T Consensus        84 ~~~aa~   89 (356)
T d1rkxa_          84 FHMAAQ   89 (356)
T ss_dssp             EECCSC
T ss_pred             hhhhcc
Confidence            998873

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=96.20  E-value=0.082  Score=36.03  Aligned_cols=96  Identities=15%  Similarity=0.068  Sum_probs=60.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHc--CCEEEEEeCC--HHHHHHHHHHhCCCceeecCCchhH---HHH-------------
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV--GCYVVGSARS--KEKVDLLKHKFGFDDAFNYKEEPDL---DAA-------------  142 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~--~~~~~~~~~~~g~~~vi~~~~~~~~---~~~-------------  142 (270)
                      +|.|.|+||++|..++.+.+..  .++|++.+..  -+.+.....+|....++-..+. .+   ...             
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~-~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEA-SAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHH-HHHHHHHHHHHTTCCCEEEES
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHH-HHHHHHHHhhhhccccccccC
Confidence            6899999999999999999877  3577777633  2333333337777655433322 11   111             


Q ss_pred             ---HHhHcCC-CccEEEeCCCc-chHHHHHHccccCCEEEEE
Q 042426          143 ---LNRCFPE-GIDIYFENVGG-KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       143 ---i~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  179 (270)
                         +.+.... .+|+|+.+..+ .-+.-.+..++.+-++...
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLA  123 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLA  123 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEEC
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEE
Confidence               1222222 58999988865 5777777777777665553

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.034  Score=39.80  Aligned_cols=40  Identities=23%  Similarity=0.225  Sum_probs=35.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK  122 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~  122 (270)
                      .+|.|+|+ |-+|...++++...|++|++.+++++.++.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHH
Confidence            47999998 99999999999999999999999998766554

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.13  E-value=0.0085  Score=45.51  Aligned_cols=32  Identities=16%  Similarity=0.260  Sum_probs=29.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      +|||+||+|-+|..++..+...|.+|++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence            69999999999999999999999999999865

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=96.05  E-value=0.11  Score=36.48  Aligned_cols=140  Identities=14%  Similarity=0.102  Sum_probs=78.2

Q ss_pred             EEEEecCCchHHHH-HHHHHHHcC--CEEEEEe-CCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           83 YVYVSAASGAVGQL-VGQFVKLVG--CYVVGSA-RSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        83 ~vlI~ga~g~vG~~-ai~la~~~g--~~v~~~~-~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      ++.|.|. |.+|.. .+...+..+  .++++++ +++++.+.+.++++...+++     ++.+.+.+   ..+|+|+-|+
T Consensus         5 rigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~-----~~~ell~~---~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD-----SYEELLES---GLVDAVDLTL   75 (181)
T ss_dssp             EEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES-----CHHHHHHS---SCCSEEEECC
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee-----eeeccccc---cccceeeccc
Confidence            6889996 999974 466666543  4777655 55666676665788654432     45554442   2589999888


Q ss_pred             Ccc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhh-ccee-eeccccCcccchHHHHHHHHHHHHCCcee
Q 042426          159 GGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGK-RICM-EGFLAGDFYHQYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       159 g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  235 (270)
                      ... ..+.+..++..+-. |.+..+...+   ............+ +..+ .++...  ...+...+.++.+++++|++.
T Consensus        76 p~~~h~~~~~~al~~gk~-V~~EKPl~~~---~~e~~~l~~~~~~~~~~~~v~~~~R--~~~~~~~~~~~~~~i~~G~ig  149 (181)
T d1zh8a1          76 PVELNLPFIEKALRKGVH-VICEKPISTD---VETGKKVVELSEKSEKTVYIAENFR--ENSYQKEFEDFYQVVAEGKPN  149 (181)
T ss_dssp             CGGGHHHHHHHHHHTTCE-EEEESSSSSS---HHHHHHHHHHHHHCSSCEEEECGGG--CCHHHHHHHHHHHHHHSCCCC
T ss_pred             cccccccccccccccchh-hhcCCCCcCC---HHHHHHHHHHHHHhCCeEEEEeecc--ccccCHHHHHHHHHHHCCCCc
Confidence            764 66677777776544 4544422110   0000111111111 2222 222221  122456788889999999875


Q ss_pred             ee
Q 042426          236 YV  237 (270)
Q Consensus       236 ~~  237 (270)
                      ..
T Consensus       150 ~i  151 (181)
T d1zh8a1         150 DL  151 (181)
T ss_dssp             SS
T ss_pred             cC
Confidence            43

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=96.01  E-value=0.003  Score=46.82  Aligned_cols=96  Identities=10%  Similarity=0.073  Sum_probs=64.1

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCCc
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKL---VGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~---~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      ++++.+||-+|  +|.|..+..+++.   .+++|++++.|++-++.+++..   +....+..... +.    .+...+.+
T Consensus        37 ~~~~~~vLDlG--CGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~-d~----~~~~~~~~  109 (225)
T d1im8a_          37 VTADSNVYDLG--CSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN-DI----RHVEIKNA  109 (225)
T ss_dssp             CCTTCEEEEES--CTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS-CT----TTCCCCSE
T ss_pred             cCCCCEEEEec--cchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccc-hh----hccccccc
Confidence            67889999998  7788888888875   4789999999999888887443   22211211111 11    11112246


Q ss_pred             cEEEeCCCc---------chHHHHHHccccCCEEEEEc
Q 042426          152 DIYFENVGG---------KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       152 d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g  180 (270)
                      |+++-+..-         ..++.+.+.|+|+|.++...
T Consensus       110 d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         110 SMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             EEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            666554331         25889999999999998764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.99  E-value=0.0035  Score=46.82  Aligned_cols=36  Identities=19%  Similarity=0.205  Sum_probs=32.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK  117 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~  117 (270)
                      .++||+||++++|.+.++.+...|++|+++.++++.
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            478999999999999999999999999999987543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.98  E-value=0.013  Score=47.02  Aligned_cols=32  Identities=19%  Similarity=0.107  Sum_probs=29.2

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA  112 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~  112 (270)
                      |.+|||+||+|=+|..+++.+...|.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            67899999999999999999999999999986

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.97  E-value=0.0042  Score=44.89  Aligned_cols=101  Identities=14%  Similarity=0.089  Sum_probs=64.6

Q ss_pred             hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc-eeecCCchhHHHHHHhHc
Q 042426           72 LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDD-AFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        72 l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-vi~~~~~~~~~~~i~~~~  147 (270)
                      +.+.....++++||=.|  +|.|..++.+++ .+.+|++++.++...+.+++.   .+... -+..... ++.+.+   .
T Consensus        44 Li~~l~~~~~~~VLDiG--cG~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~-d~~~~~---~  116 (194)
T d1dusa_          44 LVENVVVDKDDDILDLG--CGYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHS-DLYENV---K  116 (194)
T ss_dssp             HHHHCCCCTTCEEEEET--CTTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC-STTTTC---T
T ss_pred             HHHhCCcCCCCeEEEEe--ecCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEc-chhhhh---c
Confidence            33556678899999998  677777777765 467999999999888877642   23321 1111111 221111   1


Q ss_pred             CCCccEEEeCC----Cc----chHHHHHHccccCCEEEEE
Q 042426          148 PEGIDIYFENV----GG----KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       148 ~~~~d~v~d~~----g~----~~~~~~~~~l~~~G~~v~~  179 (270)
                      ++.||+|+-..    +.    ..++.+.+.|+|+|+++..
T Consensus       117 ~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            23699998632    22    2467788999999988654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.96  E-value=0.003  Score=44.28  Aligned_cols=92  Identities=17%  Similarity=0.104  Sum_probs=56.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeecCCchhHHHHHHhHcCCCccEEEeCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-AFNYKEEPDLDAALNRCFPEGIDIYFENVGGK  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~  161 (270)
                      +|+|+|+ |.+|.+....+...|.+|.++++++++.+... ..+.+. ........+..+.+.     .+|++|-++-..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~D~iii~vka~   74 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVN-LVETDGSIFNESLTANDPDFLA-----TSDLLLVTLKAW   74 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEE-EECTTSCEEEEEEEESCHHHHH-----TCSEEEECSCGG
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhc-cccCCccccccccccchhhhhc-----ccceEEEeeccc
Confidence            6899998 99999888888888999999998876444332 223221 110000001122222     389999999875


Q ss_pred             hHHHHH----HccccCCEEEEEcc
Q 042426          162 MLDAVL----LNMRICGHIAVCGM  181 (270)
Q Consensus       162 ~~~~~~----~~l~~~G~~v~~g~  181 (270)
                      .+..++    .++.++..++.+.+
T Consensus        75 ~~~~~~~~l~~~~~~~~~Iv~~qN   98 (167)
T d1ks9a2          75 QVSDAVKSLASTLPVTTPILLIHN   98 (167)
T ss_dssp             GHHHHHHHHHTTSCTTSCEEEECS
T ss_pred             chHHHHHhhccccCcccEEeeccC
Confidence            444444    45555666776643

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.94  E-value=0.015  Score=41.75  Aligned_cols=80  Identities=16%  Similarity=0.155  Sum_probs=57.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC------ce----eecCCchhHHHHHHhHcCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD------DA----FNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~------~v----i~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      +|.|+|+ |.+|.+.+.++...|.+|.+..++++..+.+. +-+..      ..    +....  ++.+.+.+     .|
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~-~~~~n~~yl~~~~l~~~i~~t~--~l~~a~~~-----ad   79 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN-EKRENVLFLKGVQLASNITFTS--DVEKAYNG-----AE   79 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH-HHTBCTTTSTTCBCCTTEEEES--CHHHHHTT-----CS
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh-hcccccccccccccccccccch--hhhhccCC-----CC
Confidence            6999997 99999999999888889999999999888876 33211      01    11111  45555543     89


Q ss_pred             EEEeCCCcchHHHHHHccc
Q 042426          153 IYFENVGGKMLDAVLLNMR  171 (270)
Q Consensus       153 ~v~d~~g~~~~~~~~~~l~  171 (270)
                      +++-++....+...++.++
T Consensus        80 ~iiiavPs~~~~~~~~~~~   98 (189)
T d1n1ea2          80 IILFVIPTQFLRGFFEKSG   98 (189)
T ss_dssp             CEEECSCHHHHHHHHHHHC
T ss_pred             EEEEcCcHHHHHHHHHHHH
Confidence            9999998877666665543

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.89  E-value=0.034  Score=39.90  Aligned_cols=94  Identities=13%  Similarity=0.080  Sum_probs=60.8

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCce-eecCCchhHHHHHHhHcCCCccE
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDA-FNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      +++| +||-+|  +|.|..+..+++ .|++|++++.++..++.+++   +.+.+.+ +...+..++      ...+.||+
T Consensus        29 ~~~g-rvLDiG--cG~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~------~~~~~fD~   98 (198)
T d2i6ga1          29 VAPG-RTLDLG--CGNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL------TFDGEYDF   98 (198)
T ss_dssp             SCSC-EEEEET--CTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC------CCCCCEEE
T ss_pred             CCCC-cEEEEC--CCCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc------cccccccE
Confidence            4554 899998  568888888876 48999999999988777652   3344422 111111000      01236999


Q ss_pred             EEeCCCc---------chHHHHHHccccCCEEEEEcc
Q 042426          154 YFENVGG---------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       154 v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      |+...--         ..++.+.++|+|+|+++....
T Consensus        99 I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1          99 ILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             EEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             EEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            9863321         256778889999999887644

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.86  E-value=0.062  Score=37.01  Aligned_cols=92  Identities=12%  Similarity=0.131  Sum_probs=53.4

Q ss_pred             cEEEEecCCchHHH-HHHHHHHHcCC-EEEEEeC-CHH--HHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           82 EYVYVSAASGAVGQ-LVGQFVKLVGC-YVVGSAR-SKE--KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        82 ~~vlI~ga~g~vG~-~ai~la~~~g~-~v~~~~~-~~~--~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      =++.|.| +|++|. ..+++.+.... +++++++ +.+  ..++.+ ++|....  +.   .+...+......++|+||+
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~-~~~i~~~--~~---~~d~l~~~~~~~~iDiVf~   77 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ-RMGVTTT--YA---GVEGLIKLPEFADIDFVFD   77 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH-HTTCCEE--SS---HHHHHHHSGGGGGEEEEEE
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhh-hcCCccc--cc---ceeeeeecccccccCEEEE
Confidence            4799999 699987 56778776654 8888764 332  345565 7776522  11   2222222111125999999


Q ss_pred             CCCcc-hHHHH--HHccccCCEEEEEc
Q 042426          157 NVGGK-MLDAV--LLNMRICGHIAVCG  180 (270)
Q Consensus       157 ~~g~~-~~~~~--~~~l~~~G~~v~~g  180 (270)
                      ++... .....  .+.++.|-.++...
T Consensus        78 ATpag~h~~~~~~~~aa~~G~~VID~s  104 (157)
T d1nvmb1          78 ATSASAHVQNEALLRQAKPGIRLIDLT  104 (157)
T ss_dssp             CSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cCCchhHHHhHHHHHHHHcCCEEEEcc
Confidence            98753 44433  34455555665544

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.85  E-value=0.026  Score=41.59  Aligned_cols=69  Identities=20%  Similarity=0.199  Sum_probs=53.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|+|.|. |.+|..+++++...|+++++++.+..+.+.+....|... ++..   ++       ..-.+|+.+=|+.
T Consensus        38 ~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~-~~~~---~~-------~~~~cDIl~PcA~  105 (230)
T d1leha1          38 EGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA-VAPN---AI-------YGVTCDIFAPCAL  105 (230)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE-CCGG---GT-------TTCCCSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcc-cCCc---cc-------ccccccEeccccc
Confidence            5789999997 999999999999999999999999888888876777642 2211   11       1125888888876


Q ss_pred             c
Q 042426          160 G  160 (270)
Q Consensus       160 ~  160 (270)
                      +
T Consensus       106 ~  106 (230)
T d1leha1         106 G  106 (230)
T ss_dssp             S
T ss_pred             c
Confidence            5

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=95.85  E-value=0.034  Score=43.44  Aligned_cols=73  Identities=16%  Similarity=0.171  Sum_probs=47.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHh---CCCc-eeecCCchhHHHHHHhHcCCCccEE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSAR----SKEKVDLLKHKF---GFDD-AFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~----~~~~~~~~~~~~---g~~~-vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      +|||+||+|=+|..++..+...|.+|+++++    ......... ..   +... ..|-.+.+.+.+.+++   .++|+|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~l~~~~~~---~~~d~V   77 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALMTEILHD---HAIDTV   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHH-HHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHH-hhcCCCCEEEEeecCCHHHHHHHHhc---cCCCEE
Confidence            5999999999999999999889999999864    222333332 22   2221 1344444234344432   258999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      |.+++
T Consensus        78 iHlAa   82 (338)
T d1udca_          78 IHFAG   82 (338)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            99875

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=95.83  E-value=0.021  Score=44.45  Aligned_cols=73  Identities=15%  Similarity=0.284  Sum_probs=47.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeC-----CHHHHHHHHHHhC-CCc-eeecCCchhHHHHHHhHcCCCccEEE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSAR-----SKEKVDLLKHKFG-FDD-AFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~-----~~~~~~~~~~~~g-~~~-vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      +|||+||+|=+|..+++.+...|.+|+++++     ..++.+.+. ..+ ... ..|..+..++.+.+...   ++|+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~---~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY---MPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhc---CCceEE
Confidence            6999999999999999988888999999852     122333333 222 221 13444432344444332   479999


Q ss_pred             eCCC
Q 042426          156 ENVG  159 (270)
Q Consensus       156 d~~g  159 (270)
                      .+++
T Consensus        78 h~aa   81 (338)
T d1orra_          78 HLAG   81 (338)
T ss_dssp             ECCC
T ss_pred             eecc
Confidence            9886

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.81  E-value=0.022  Score=40.44  Aligned_cols=83  Identities=24%  Similarity=0.218  Sum_probs=61.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|.|+|. |.+|...+++++.+|++|++..+++.+        +.....    . ++.+.+.+     .|+|+-++.
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~----~-~l~ell~~-----sDiv~~~~p  101 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFT----N-SLEEALRE-----ARAAVCALP  101 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCB----S-CSHHHHTT-----CSEEEECCC
T ss_pred             cCceEEEecc-ccccccceeeeeccccccccccccccc--------cceeee----e-chhhhhhc-----cchhhcccc
Confidence            4789999997 999999999999999999999876321        111111    1 34444444     789888775


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEcc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      - +     .-...++.|+++..++.++.
T Consensus       102 l~~~t~~li~~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1         102 LNKHTRGLVKYQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             cccccccccccceeeeccccceEEeccc
Confidence            2 1     23678889999999999876

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=95.72  E-value=0.0052  Score=46.35  Aligned_cols=33  Identities=15%  Similarity=0.319  Sum_probs=30.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .|||+||++++|.+.++.+...|++|+++++++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~   35 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRD   35 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            589999999999999999999999999999764

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=95.68  E-value=0.019  Score=43.55  Aligned_cols=96  Identities=10%  Similarity=0.018  Sum_probs=65.9

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      ..++.+||=+|  +|.|..+..+++.. +.++++++.++.-.+.+++...-...+..+.. ++     ...++.||+|+.
T Consensus        82 ~~~~~~iLDiG--cG~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~  153 (268)
T d1p91a_          82 DDKATAVLDIG--CGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RL-----PFSDTSMDAIIR  153 (268)
T ss_dssp             CTTCCEEEEET--CTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred             CCCCCEEEEeC--CCCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehh-hc-----cCCCCCEEEEee
Confidence            35677899888  67788888888765 67999999999988888833321111111111 11     011236999997


Q ss_pred             CCCcchHHHHHHccccCCEEEEEcc
Q 042426          157 NVGGKMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       157 ~~g~~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ...-..+.+..+.|+|+|.++....
T Consensus       154 ~~~~~~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         154 IYAPCKAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHhCCCcEEEEEee
Confidence            6655678899999999999987643

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=95.68  E-value=0.021  Score=43.80  Aligned_cols=34  Identities=15%  Similarity=0.142  Sum_probs=30.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .+|||+||+|-+|..++..+...|.+|++++|+.
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~   37 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE   37 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence            5699999999999999998888999999999753

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.65  E-value=0.015  Score=43.94  Aligned_cols=98  Identities=14%  Similarity=0.023  Sum_probs=63.3

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCC-Ccc
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPE-GID  152 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~-~~d  152 (270)
                      .+++|++||-.+  +|+|..++.+|+.-+++|+++..+++..+.+++   ..+....+..-.. |.    .+..+. .+|
T Consensus       104 ~~~~g~~VlD~~--aG~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~-D~----~~~~~~~~~D  176 (260)
T d2frna1         104 VAKPDELVVDMF--AGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM-DN----RDFPGENIAD  176 (260)
T ss_dssp             HCCTTCEEEETT--CTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS-CT----TTCCCCSCEE
T ss_pred             hcCCccEEEECc--ceEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEc-ch----HHhccCCCCC
Confidence            468999999988  567777778887655699999999998887763   2344321211111 21    112222 688


Q ss_pred             EEE-eCCC--cchHHHHHHccccCCEEEEEcc
Q 042426          153 IYF-ENVG--GKMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       153 ~v~-d~~g--~~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .|+ +...  ...+..+++.++++|.+.....
T Consensus       177 ~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~~  208 (260)
T d2frna1         177 RILMGYVVRTHEFIPKALSIAKDGAIIHYHNT  208 (260)
T ss_dssp             EEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEECCCCchHHHHHHHHhhcCCCCEEEEEec
Confidence            554 4332  2478889999999998765433

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.59  E-value=0.038  Score=37.76  Aligned_cols=78  Identities=12%  Similarity=0.006  Sum_probs=53.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCC--CccEEEeCCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPE--GIDIYFENVG  159 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~--~~d~v~d~~g  159 (270)
                      .+|.|+|+.|.+|...+..++..|.+|.+.+++........ ..+++.++.........+.+.+..+.  .=.+++|+.+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-LANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-hhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence            47999997799999999999999999999998776555444 44565554443332344444444332  2257888877


Q ss_pred             c
Q 042426          160 G  160 (270)
Q Consensus       160 ~  160 (270)
                      .
T Consensus        89 v   89 (152)
T d2pv7a2          89 V   89 (152)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=95.56  E-value=0.034  Score=41.74  Aligned_cols=98  Identities=8%  Similarity=0.017  Sum_probs=67.4

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHc--CCCccEE
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCF--PEGIDIY  154 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~--~~~~d~v  154 (270)
                      ...++.+||=.|  +|+|..+..++.....+|+++..+++-++.+++.+.....+++... ++    .+..  ++.||+|
T Consensus        90 ~~~~~~~vLD~G--cG~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~-d~----~~~~~~~~~fD~I  162 (254)
T d1xtpa_          90 PGHGTSRALDCG--AGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILA-SM----ETATLPPNTYDLI  162 (254)
T ss_dssp             TTCCCSEEEEET--CTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEES-CG----GGCCCCSSCEEEE
T ss_pred             CCCCCCeEEEec--ccCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEc-cc----cccccCCCccceE
Confidence            345677899888  7889888888877677999999999999999856544333333221 21    1221  2369998


Q ss_pred             EeCCCc---------chHHHHHHccccCCEEEEEcc
Q 042426          155 FENVGG---------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       155 ~d~~g~---------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +..-.-         ..+..+.+.|+++|.++....
T Consensus       163 ~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~  198 (254)
T d1xtpa_         163 VIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN  198 (254)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EeeccccccchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence            764431         246788899999999887543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.54  E-value=0.061  Score=38.18  Aligned_cols=40  Identities=13%  Similarity=0.046  Sum_probs=34.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK  122 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~  122 (270)
                      .+|.|+|+ |-+|...+.++...|++|++.+++++..+...
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGL   44 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhh
Confidence            35999998 99999999888888999999999988766654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.52  E-value=0.022  Score=41.15  Aligned_cols=78  Identities=19%  Similarity=0.290  Sum_probs=56.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .|.+|+|.|. |.+|..+++++...|++|++.+.+.++..... .+|... ++..   ++       ..-.+|+.+-|..
T Consensus        26 ~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-~~g~~~-~~~~---~~-------~~~~~DI~iPcA~   92 (201)
T d1c1da1          26 DGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHTA-VALE---DV-------LSTPCDVFAPCAM   92 (201)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-CCGG---GG-------GGCCCSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-hhcccc-cCcc---cc-------ccccceeeecccc
Confidence            5789999996 99999999999999999999998888888887 777642 2221   11       1114888887775


Q ss_pred             cc-hHHHHHHcc
Q 042426          160 GK-MLDAVLLNM  170 (270)
Q Consensus       160 ~~-~~~~~~~~l  170 (270)
                      +. .-....+.+
T Consensus        93 ~~~I~~~~a~~i  104 (201)
T d1c1da1          93 GGVITTEVARTL  104 (201)
T ss_dssp             SCCBCHHHHHHC
T ss_pred             cccccHHHHhhh
Confidence            43 334444444

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.52  E-value=0.15  Score=34.45  Aligned_cols=93  Identities=16%  Similarity=0.076  Sum_probs=57.8

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCcee----ecCCchhHHHHHHhHcCCCccEEE
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFGFDDAF----NYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g~~~vi----~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      .+|.|.||+|.+|..++.++...+.  +++..+..+.+.+.+. -.-.....    ..... ++.+.++     +.|+|+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~D-l~~~~~~~~~~~~~~~~-~~~~~~~-----~aDivV   73 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAAD-LSHIETRATVKGYLGPE-QLPDCLK-----GCDVVV   73 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHH-HTTSSSSCEEEEEESGG-GHHHHHT-----TCSEEE
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHH-HhhhhhhcCCCeEEcCC-ChHHHhC-----CCCEEE
Confidence            3689999889999999999998886  7888886655443332 22221111    11222 4555553     389999


Q ss_pred             eCCCcc---------h-------HHH---HHHccccCCEEEEEcc
Q 042426          156 ENVGGK---------M-------LDA---VLLNMRICGHIAVCGM  181 (270)
Q Consensus       156 d~~g~~---------~-------~~~---~~~~l~~~G~~v~~g~  181 (270)
                      -+.|.+         .       ++.   .+.-..|++.++.+++
T Consensus        74 itag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          74 IPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             ECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            998832         1       122   2223367899888866

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.50  E-value=0.081  Score=37.06  Aligned_cols=93  Identities=14%  Similarity=0.050  Sum_probs=58.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD--AFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .+|-++|. |.+|...+.-+...|.+|++..+++++.+.+. +.++..  .....   ... .+.+... ..|.++-++.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~-~~~~~~~~~~~a~---~~~-~~~~~~~-~~~~ii~~~~   75 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFL-ANEAKGTKVLGAH---SLE-EMVSKLK-KPRRIILLVK   75 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHH-HTTTTTSSCEECS---SHH-HHHHHBC-SSCEEEECSC
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-Hhccccccccchh---hhh-hhhhhhc-ccceEEEecC
Confidence            46889997 99999888888888999999999999998887 444321  11111   121 1222111 2566666654


Q ss_pred             cc-----hHHHHHHccccCCEEEEEcc
Q 042426          160 GK-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ..     ..+.....++++-.++.++.
T Consensus        76 ~~~~v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          76 AGQAVDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             TTHHHHHHHHHHHHHCCTTCEEEECSC
T ss_pred             chHHHHHHHHHHHhccccCcEEEecCc
Confidence            32     33445556666666666544

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.47  E-value=0.028  Score=39.66  Aligned_cols=45  Identities=18%  Similarity=0.225  Sum_probs=36.3

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF  125 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~  125 (270)
                      -++.+|+|+|+ ||++.+++.-+...| +|+++.|+.++.+.+.+.+
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            45789999997 999998887776555 9999999999887776444

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.45  E-value=0.011  Score=43.38  Aligned_cols=101  Identities=10%  Similarity=0.096  Sum_probs=64.7

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHh---H
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNR---C  146 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~---~  146 (270)
                      ..+..+..+||-+|  ++.|..++.+|+.+  +.+|+.+..+++..+.+++   ..|....+..... +..+.+.+   .
T Consensus        51 lv~~~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~G-d~~e~l~~l~~~  127 (214)
T d2cl5a1          51 VIREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKKK  127 (214)
T ss_dssp             HHHHHCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGHHHH
T ss_pred             HHHhhCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeec-cccccccchhhc
Confidence            33444557899998  77888889999876  5699999999887776652   4566433333333 44443333   2


Q ss_pred             cC-CCccEEEeCCCcc------hHHHHHHccccCCEEEE
Q 042426          147 FP-EGIDIYFENVGGK------MLDAVLLNMRICGHIAV  178 (270)
Q Consensus       147 ~~-~~~d~v~d~~g~~------~~~~~~~~l~~~G~~v~  178 (270)
                      .. +.+|++|--....      .+..++++|+|||.++.
T Consensus       128 ~~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         128 YDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             SCCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             ccccccceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence            22 2689886433322      24556678999997664

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.42  E-value=0.17  Score=34.37  Aligned_cols=95  Identities=8%  Similarity=-0.033  Sum_probs=60.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHH--hCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKV-DLLKHK--FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~-~~~~~~--~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      -++++|.|+ |.+|..+++.+...|.+++++..++++. +.+.+.  .|.. ++ +.+. .-.+.+++..-..+|.++-+
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~-vi-~Gd~-~d~~~L~~a~i~~a~~vi~~   78 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VI-PGDS-NDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EE-ESCT-TSHHHHHHHTTTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcE-EE-EccC-cchHHHHHhccccCCEEEEc
Confidence            357999998 9999999999999999999998776543 333312  2332 22 2222 22334455444468999988


Q ss_pred             CCcc----hHHHHHHccccCCEEEEE
Q 042426          158 VGGK----MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       158 ~g~~----~~~~~~~~l~~~G~~v~~  179 (270)
                      ++.+    ......+.+.+..+++..
T Consensus        79 ~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          79 SDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             cccHHHHHHHHHHHHHhCCCCceEEE
Confidence            8764    233344455666666554

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.36  E-value=0.07  Score=37.02  Aligned_cols=135  Identities=12%  Similarity=0.128  Sum_probs=78.2

Q ss_pred             EEEEecCCchHHHH-HHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQL-VGQFVKLV-GCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~-ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +|.|+|+ |.+|.. .+...+.. +.++++.++++++.+.+.++++....++     ++.+.+.    ..+|.|+-|+..
T Consensus         3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~ll~----~~iD~V~I~tp~   72 (167)
T d1xeaa1           3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT-----DYRDVLQ----YGVDAVMIHAAT   72 (167)
T ss_dssp             EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS-----STTGGGG----GCCSEEEECSCG
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc-----cHHHhcc----cccceecccccc
Confidence            6889997 999864 45555544 5588777788888888876888754432     2222221    148999988876


Q ss_pred             c-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHh-hccee-eeccccCcccchHHHHHHHHHHHHCCceeee
Q 042426          161 K-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVG-KRICM-EGFLAGDFYHQYPKFLELVMLAIKEGKLVYV  237 (270)
Q Consensus       161 ~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  237 (270)
                      . ..+.+..++..+-. |.+..+...+   ............ ++..+ .++      .++...+.++.+.+..|++...
T Consensus        73 ~~H~~~~~~al~~gk~-V~~EKP~~~~---~~e~~~l~~~a~~~~~~~~vg~------~r~~~~~~~~~~~~~~G~ig~~  142 (167)
T d1xeaa1          73 DVHSTLAAFFLHLGIP-TFVDKPLAAS---AQECENLYELAEKHHQPLYVGF------NGFDAMVQDWLQVAAAGKLPTH  142 (167)
T ss_dssp             GGHHHHHHHHHHTTCC-EEEESCSCSS---HHHHHHHHHHHHHTTCCEEEEC------GTHHHHHHHHHHHHHHTCCCHH
T ss_pred             cccccccccccccccc-cccCCCCcCC---HHHHHHHHHHHHHcCCEEEEEe------CcCCHHHHHHHHHhhcCCCCcE
Confidence            4 67777788877644 4444322110   000011111111 22222 222      1234567888888888988644

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.28  E-value=0.29  Score=34.56  Aligned_cols=85  Identities=18%  Similarity=0.193  Sum_probs=60.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .+.++.|+|. |.+|..++++++.+|++|+...+...        ..........   ++.+.+.+     .|++.-+..
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~--------~~~~~~~~~~---~l~ell~~-----sDii~i~~p  105 (188)
T d1sc6a1          43 RGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENK--------LPLGNATQVQ---HLSDLLNM-----SDVVSLHVP  105 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC--------CCCTTCEECS---CHHHHHHH-----CSEEEECCC
T ss_pred             cceEEEEeec-ccchhhhhhhcccccceEeecccccc--------chhhhhhhhh---hHHHHHhh-----ccceeeccc
Confidence            4679999997 99999999999999999999986422        1111112121   45555554     788888765


Q ss_pred             c-c-----hHHHHHHccccCCEEEEEcc
Q 042426          160 G-K-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~-~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      - +     .-...++.|+++..+|.++.
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~aR  133 (188)
T d1sc6a1         106 ENPSTKNMMGAKEISLMKPGSLLINASR  133 (188)
T ss_dssp             SSTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             CCcchhhhccHHHHhhCCCCCEEEEcCc
Confidence            2 2     34678889999999998866

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=95.22  E-value=0.04  Score=43.50  Aligned_cols=34  Identities=21%  Similarity=0.361  Sum_probs=29.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      ..+||+||+|=+|..++..+...|.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            4688999999999999999988899999999743

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.21  E-value=0.018  Score=37.33  Aligned_cols=35  Identities=20%  Similarity=0.294  Sum_probs=31.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE  116 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~  116 (270)
                      +.+|.|+|+ |-.|.+.++-|+.+|+++++.+.+++
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            357999997 99999999999999999999997654

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.17  E-value=0.019  Score=39.16  Aligned_cols=88  Identities=20%  Similarity=0.112  Sum_probs=49.0

Q ss_pred             EEEEecCCchHHHHHHHH-HHHcC---CEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           83 YVYVSAASGAVGQLVGQF-VKLVG---CYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~l-a~~~g---~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      +|.|.||||-+|+-.+++ +....   .+++...++........ ..+.. .+.+..+   .. .+.     ++|++|-|
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~-~~~~~~~~~~~~~---~~-~~~-----~~DivF~a   72 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS-FGGTTGTLQDAFD---LE-ALK-----ALDIIVTC   72 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG-GGTCCCBCEETTC---HH-HHH-----TCSEEEEC
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc-ccCCceeeecccc---hh-hhh-----cCcEEEEe
Confidence            689999999999999974 44332   37776665532221111 11111 1122111   11 111     49999999


Q ss_pred             CCcchHHHHHHccccCC---EEEEEc
Q 042426          158 VGGKMLDAVLLNMRICG---HIAVCG  180 (270)
Q Consensus       158 ~g~~~~~~~~~~l~~~G---~~v~~g  180 (270)
                      ++..........+...|   .++..+
T Consensus        73 ~~~~~s~~~~~~~~~~g~~~~VID~S   98 (146)
T d1t4ba1          73 QGGDYTNEIYPKLRESGWQGYWIDAA   98 (146)
T ss_dssp             SCHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred             cCchHHHHhhHHHHhcCCCeecccCC
Confidence            99876655555554444   355543

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.16  E-value=0.22  Score=34.62  Aligned_cols=96  Identities=17%  Similarity=0.094  Sum_probs=60.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEeC--CHHHHHHHHHHhCCCceeecCCchhHHHHHHhHc----------CC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVG-CYVVGSAR--SKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCF----------PE  149 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~--~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~----------~~  149 (270)
                      +|.|.|- |-+|...+..+.... .+++.+..  .......+. +++.+... ...  +......+..          ..
T Consensus         4 rIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~-~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~   78 (172)
T d2czca2           4 KVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAK-ELGIPVYA-ASE--EFIPRFEKEGFEVAGTLNDLLE   78 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHH-HTTCCEEE-SSG--GGHHHHHHHTCCCSCBHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhh-hcCceeec-ccc--cceeeecccCccccchhhhhhc
Confidence            6899997 999998888776544 57777763  233444555 56654211 111  1111111110          01


Q ss_pred             CccEEEeCCCcc-hHHHHHHccccCCEEEEEcccc
Q 042426          150 GIDIYFENVGGK-MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       150 ~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      ++|+|+||+|.- ..+.+-..+..+-+.|.++.+.
T Consensus        79 ~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          79 KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             cCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            599999999974 5667777888898888887644

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.10  E-value=0.32  Score=34.04  Aligned_cols=91  Identities=14%  Similarity=0.171  Sum_probs=60.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEe-CCHHHHHHHHHHhCCCcee-ecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV-GCYVVGSA-RSKEKVDLLKHKFGFDDAF-NYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~-~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      ++.|+|. |.+|...++..+.. ++++++++ +++++.+.+.++++..... .+.   ++.+.+.+   ..+|+|+-|+.
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~ll~~---~~iD~v~I~tp   75 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG---SYESLLED---PEIDALYVPLP   75 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES---SHHHHHHC---TTCCEEEECCC
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC---cHHHhhhc---cccceeeeccc
Confidence            5889996 99999888877766 56888665 5666666665577763211 122   45554432   25899999887


Q ss_pred             cc-hHHHHHHccccCCEEEEEcc
Q 042426          160 GK-MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~~-~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .. .++.+..++..+-. +.+..
T Consensus        76 ~~~h~~~~~~~l~~g~~-v~~EK   97 (184)
T d1ydwa1          76 TSLHVEWAIKAAEKGKH-ILLEK   97 (184)
T ss_dssp             GGGHHHHHHHHHTTTCE-EEECS
T ss_pred             chhhcchhhhhhhccce-eeccc
Confidence            64 77777778776644 44543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.10  E-value=0.027  Score=43.88  Aligned_cols=33  Identities=21%  Similarity=0.332  Sum_probs=30.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      .++||+||+|=+|..++..+...|.+|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            368999999999999999998899999999974

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.04  E-value=0.021  Score=41.92  Aligned_cols=100  Identities=13%  Similarity=0.082  Sum_probs=66.0

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEE
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      ...++.+||-+|  +|.|..+..+++..+.+|++++.+++-++.+++.+...  ..+.+... ++.+ +. ..++.||+|
T Consensus        57 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~-d~~~-~~-~~~~~fD~I  131 (222)
T d2ex4a1          57 NKTGTSCALDCG--AGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC-GLQD-FT-PEPDSYDVI  131 (222)
T ss_dssp             -CCCCSEEEEET--CTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC-CGGG-CC-CCSSCEEEE
T ss_pred             CCCCCCEEEEec--cCCCHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccc-cccc-cc-ccccccccc
Confidence            456678999998  78888888888777779999999999988888444321  11222221 2211 10 112368999


Q ss_pred             EeCCC-----c----chHHHHHHccccCCEEEEEcc
Q 042426          155 FENVG-----G----KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       155 ~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +....     .    ..+..+.+.|+|+|.++....
T Consensus       132 ~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         132 WIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence            87432     1    256788889999999987654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.02  E-value=0.19  Score=34.55  Aligned_cols=86  Identities=14%  Similarity=0.152  Sum_probs=56.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-  161 (270)
                      +|.++|. |.+|...+..+...|.+|++..+++++.+.+. ..+....   .   +..+.+.+     .|+++-|+... 
T Consensus         3 kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~-~~~~~~~---~---~~~e~~~~-----~diii~~v~~~~   69 (162)
T d3cuma2           3 QIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-AAGASAA---R---SARDAVQG-----ADVVISMLPASQ   69 (162)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCEEC---S---SHHHHHTS-----CSEEEECCSCHH
T ss_pred             EEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhh-hhhcccc---c---hhhhhccc-----cCeeeecccchh
Confidence            6889986 99999888888888999999999999988887 6665311   1   23333332     67777777653 


Q ss_pred             hHHH-------HHHccccCCEEEEEcc
Q 042426          162 MLDA-------VLLNMRICGHIAVCGM  181 (270)
Q Consensus       162 ~~~~-------~~~~l~~~G~~v~~g~  181 (270)
                      ....       ....+.++-.++.++.
T Consensus        70 ~~~~v~~~~~~~~~~l~~g~iiid~st   96 (162)
T d3cuma2          70 HVEGLYLDDDGLLAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHHHHHSTTCHHHHSCTTCEEEECSC
T ss_pred             hHHHHHhccccccccCCCCCEEEECCC
Confidence            2222       2333455555555544

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.01  E-value=0.084  Score=36.53  Aligned_cols=98  Identities=16%  Similarity=0.082  Sum_probs=66.2

Q ss_pred             ccccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCch
Q 042426           58 TGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEP  137 (270)
Q Consensus        58 ~a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~  137 (270)
                      .+-+|+.....+..|.+..---.|.+|+|.|.+.-+|.-+..++...|++|+..-+..                    . 
T Consensus        14 ~~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t--------------------~-   72 (166)
T d1b0aa1          14 PRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------------K-   72 (166)
T ss_dssp             CSSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------------S-
T ss_pred             CCCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhcccccccccc--------------------c-
Confidence            3455655555555564444334689999999999999999999999999987665322                    1 


Q ss_pred             hHHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEccc
Q 042426          138 DLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       138 ~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      +..+.+++     .|+++-++|.+.+- --+.++++..++.+|..
T Consensus        73 ~l~~~~~~-----ADivI~a~G~p~~i-~~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          73 NLRHHVEN-----ADLLIVAVGKPGFI-PGDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             CHHHHHHH-----CSEEEECSCCTTCB-CTTTSCTTCEEEECCCE
T ss_pred             hhHHHHhh-----hhHhhhhccCcccc-cccccCCCcEEEecCce
Confidence            23333333     78888888865221 13467888888888764

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.98  E-value=0.048  Score=42.37  Aligned_cols=99  Identities=15%  Similarity=0.057  Sum_probs=60.4

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCce-eecCCchhHHHHHHhHcCCCccEE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDA-FNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      .+|++||=.++  ++|..++.+++ .+.+|+.++.++...+.+++   ..|.+.+ +-..+..++.+.+.+. ++.||+|
T Consensus       144 ~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~-~~~fD~V  219 (318)
T d1wxxa2         144 FRGERALDVFS--YAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKE-GERFDLV  219 (318)
T ss_dssp             CCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHT-TCCEEEE
T ss_pred             hCCCeeeccCC--CCcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhh-hcCCCEE
Confidence            46888887763  44555566664 35699999999998887763   3455422 1111111333333321 2379988


Q ss_pred             EeCC---C--c-----------chHHHHHHccccCCEEEEEcc
Q 042426          155 FENV---G--G-----------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       155 ~d~~---g--~-----------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +--.   +  .           ..+..++++|+|||.++.+.+
T Consensus       220 i~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc  262 (318)
T d1wxxa2         220 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC  262 (318)
T ss_dssp             EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            7421   1  1           135678889999999998766

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.90  E-value=0.14  Score=36.01  Aligned_cols=88  Identities=15%  Similarity=0.059  Sum_probs=55.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCC---------ceeecCCchhHHHHHHhHcCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE--KVDLLKHKFGFD---------DAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~--~~~~~~~~~g~~---------~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      +|.|+|+ |.+|.+.+..+...|.+|+...|..+  ..+.+. +-...         ..+.. .. +..+.+.+     .
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~-~~~~~~~~~~~~~~~~i~~-~~-~~~~~~~~-----a   72 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS-AGREHPRLGVKLNGVEIFW-PE-QLEKCLEN-----A   72 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH-TTCCBTTTTBCCCSEEEEC-GG-GHHHHHTT-----C
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHh-hhhhhhhhcchhccccccc-cc-cHHHHHhc-----c
Confidence            5889997 99999999988888999999886433  334443 21111         00111 11 45555543     8


Q ss_pred             cEEEeCCCcchHHHHHHcccc---CCEEEEE
Q 042426          152 DIYFENVGGKMLDAVLLNMRI---CGHIAVC  179 (270)
Q Consensus       152 d~v~d~~g~~~~~~~~~~l~~---~G~~v~~  179 (270)
                      |+++-++....+...++.+.+   +..++.+
T Consensus        73 d~Ii~avps~~~~~~~~~l~~~l~~~~ii~~  103 (180)
T d1txga2          73 EVVLLGVSTDGVLPVMSRILPYLKDQYIVLI  103 (180)
T ss_dssp             SEEEECSCGGGHHHHHHHHTTTCCSCEEEEC
T ss_pred             chhhcccchhhhHHHHHhhccccccceeccc
Confidence            999999998766666654443   2444443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.89  E-value=0.036  Score=40.11  Aligned_cols=68  Identities=18%  Similarity=0.140  Sum_probs=43.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      .+|||+||||-+|..++..+...|.  +|++..+++.         ....-++.... ++.+. .+...+.+|.|+.|+|
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~---------~~~~~~~~~~~-d~~~~-~~~~~~~~d~vi~~~g   71 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL---------AEHPRLDNPVG-PLAEL-LPQLDGSIDTAFCCLG   71 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCC---------CCCTTEECCBS-CHHHH-GGGCCSCCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCch---------hhccccccccc-chhhh-hhccccchheeeeeee
Confidence            5899999999999999998887786  6777765421         11111222222 34333 3333346899999987


Q ss_pred             c
Q 042426          160 G  160 (270)
Q Consensus       160 ~  160 (270)
                      .
T Consensus        72 ~   72 (212)
T d2a35a1          72 T   72 (212)
T ss_dssp             C
T ss_pred             e
Confidence            4

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=94.85  E-value=0.012  Score=44.14  Aligned_cols=97  Identities=9%  Similarity=0.031  Sum_probs=61.7

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhH-cCCCccE
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRC-FPEGIDI  153 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~-~~~~~d~  153 (270)
                      ++++++||=.|  +|.|..+..+++....+|++++.|++.++.++++.   +...-+..... +...  ... ..+.||+
T Consensus        22 ~~~~~~VLDlG--CG~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~-D~~~--~~~~~~~~fD~   96 (252)
T d1ri5a_          22 TKRGDSVLDLG--CGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQ-DSYG--RHMDLGKEFDV   96 (252)
T ss_dssp             CCTTCEEEEET--CTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEES-CTTT--SCCCCSSCEEE
T ss_pred             CCCcCEEEEec--ccCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEc-chhh--hcccccccceE
Confidence            57889999998  56677777887765558999999999988887443   22211111111 1100  001 1226999


Q ss_pred             EEeCCCc-----------chHHHHHHccccCCEEEEE
Q 042426          154 YFENVGG-----------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       154 v~d~~g~-----------~~~~~~~~~l~~~G~~v~~  179 (270)
                      |+....-           ..+..+.+.|+|+|.++..
T Consensus        97 V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          97 ISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             EEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            9764432           1456677899999998764

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=94.83  E-value=0.042  Score=41.84  Aligned_cols=99  Identities=15%  Similarity=0.118  Sum_probs=65.9

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCcc
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLV--GCYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~--g~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      .++.++.+||=.|  +|.|..+..+++..  +.+|++++.++.-.+.+++..... .-+.+... ++.+ +  ..++.||
T Consensus        23 ~~~~~~~~ILDiG--cG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~-d~~~-~--~~~~~fD   96 (281)
T d2gh1a1          23 WKITKPVHIVDYG--CGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEG-DATE-I--ELNDKYD   96 (281)
T ss_dssp             SCCCSCCEEEEET--CTTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEES-CTTT-C--CCSSCEE
T ss_pred             hccCCcCEEEEec--CcCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccc-cccc-c--cccCCce
Confidence            4567778999888  56788888998865  469999999999888887443221 01112111 1111 0  0123699


Q ss_pred             EEEeCCC-----c--chHHHHHHccccCCEEEEEc
Q 042426          153 IYFENVG-----G--KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       153 ~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +|+....     .  ..++.+.+.|+|+|.++...
T Consensus        97 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          97 IAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             EEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            9986543     1  26788999999999998764

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.80  E-value=0.0097  Score=46.26  Aligned_cols=32  Identities=16%  Similarity=0.232  Sum_probs=29.1

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR  113 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~  113 (270)
                      .+|||+||+|-+|..++..+...|.+|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            47999999999999999988888999999875

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.80  E-value=0.044  Score=35.79  Aligned_cols=40  Identities=20%  Similarity=0.154  Sum_probs=34.7

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .....++.+++|.|+ |.+|+-.+..++.+|.+|.++.+++
T Consensus        16 ~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          16 ELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            345667899999998 9999999999999999999999764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.74  E-value=0.052  Score=41.84  Aligned_cols=73  Identities=12%  Similarity=0.190  Sum_probs=46.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCC-----ceeecCCchhHHHHHHhHcCCCccEEE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE--KVDLLKHKFGFD-----DAFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~--~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      +|||+||+|-+|..++..+...|++|+++++...  +.+.++ .++.+     ...|-.+...+.+.+.+.   ..++++
T Consensus         2 ~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~~~~~   77 (321)
T d1rpna_           2 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA---QPQEVY   77 (321)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHH-HhcccCCcEEEEccccChHHhhhhhccc---cccccc
Confidence            7999999999999999988888999999997542  234444 44442     123444442333333332   356777


Q ss_pred             eCCC
Q 042426          156 ENVG  159 (270)
Q Consensus       156 d~~g  159 (270)
                      .+..
T Consensus        78 ~~a~   81 (321)
T d1rpna_          78 NLAA   81 (321)
T ss_dssp             ECCS
T ss_pred             cccc
Confidence            6654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.68  E-value=0.12  Score=40.27  Aligned_cols=76  Identities=17%  Similarity=0.168  Sum_probs=46.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHH--HhCCC-ceeecCCchhHHHHHHhHcCCCccEE
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS----KEKVDLLKH--KFGFD-DAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~----~~~~~~~~~--~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      ..|||+||+|=+|..++..+...|.+|+++++.    .++......  .-+.. ...|..+..++...+.. .  ++|+|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~-~--~~d~V   78 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE-Y--KIDSV   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH-S--CCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhc-c--CCCEE
Confidence            369999999999999999888889999998631    222222220  11222 12344444223333332 1  59999


Q ss_pred             EeCCCc
Q 042426          155 FENVGG  160 (270)
Q Consensus       155 ~d~~g~  160 (270)
                      +.+++.
T Consensus        79 ihlAa~   84 (347)
T d1z45a2          79 IHFAGL   84 (347)
T ss_dssp             EECCSC
T ss_pred             EEcccc
Confidence            998863

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=94.67  E-value=0.051  Score=39.78  Aligned_cols=98  Identities=8%  Similarity=0.065  Sum_probs=61.3

Q ss_pred             hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhH-cCCC
Q 042426           72 LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRC-FPEG  150 (270)
Q Consensus        72 l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~-~~~~  150 (270)
                      +....+..++.+||=+|  +|.|..+..+++ .|.+|+++..+++..+.+++...-.  +.+... ++.    +. .++.
T Consensus        12 ~~~~~~~~~~~~VLDiG--cG~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~--~~~~~~-~~~----~~~~~~~   81 (225)
T d2p7ia1          12 VRAFTPFFRPGNLLELG--SFKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDG--ITYIHS-RFE----DAQLPRR   81 (225)
T ss_dssp             HHHHGGGCCSSCEEEES--CTTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSC--EEEEES-CGG----GCCCSSC
T ss_pred             HHHhhhhCCCCcEEEEe--CCCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhcccccc--cccccc-ccc----ccccccc
Confidence            33334445567899998  677887776654 5889999999999999998554322  111111 111    11 1237


Q ss_pred             ccEEEeCCC-----c--chHHHHH-HccccCCEEEEE
Q 042426          151 IDIYFENVG-----G--KMLDAVL-LNMRICGHIAVC  179 (270)
Q Consensus       151 ~d~v~d~~g-----~--~~~~~~~-~~l~~~G~~v~~  179 (270)
                      ||+|+..--     .  ..+.... ++|+|+|.++..
T Consensus        82 fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          82 YDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             cccccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            999975322     1  1355565 679999988764

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.67  E-value=0.081  Score=40.41  Aligned_cols=96  Identities=17%  Similarity=0.123  Sum_probs=62.9

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC-------Cce-eecCCchhHHHHHHhHcCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF-------DDA-FNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~-------~~v-i~~~~~~~~~~~i~~~~~~  149 (270)
                      ...++|||+|  ||-|..+-.++++.+. +|.++.-+++-.+.+++-+..       .++ +-..   |-.+.+.+...+
T Consensus        79 ~~pk~VLiiG--gG~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~---Da~~~l~~~~~~  153 (290)
T d1xj5a_          79 PNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG---DGVAFLKNAAEG  153 (290)
T ss_dssp             SCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES---CHHHHHHTSCTT
T ss_pred             CCCcceEEec--CCchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEc---cHHHHHhhcccc
Confidence            3447899999  4556666677887776 899999999888888732311       111 1111   444555554444


Q ss_pred             CccEEE-eCCCc----------chHHHHHHccccCCEEEEE
Q 042426          150 GIDIYF-ENVGG----------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       150 ~~d~v~-d~~g~----------~~~~~~~~~l~~~G~~v~~  179 (270)
                      .||+|+ |+...          +.++.+.++|+++|.++.-
T Consensus       154 ~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q  194 (290)
T d1xj5a_         154 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  194 (290)
T ss_dssp             CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             CccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEe
Confidence            799765 44321          2578899999999999864

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.66  E-value=0.07  Score=40.40  Aligned_cols=104  Identities=13%  Similarity=0.058  Sum_probs=62.8

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHc-----C--CEEEEEeCCHHHHHHHHHHhCC----C-ceeecCCchhHH--
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV-----G--CYVVGSARSKEKVDLLKHKFGF----D-DAFNYKEEPDLD--  140 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-----g--~~v~~~~~~~~~~~~~~~~~g~----~-~vi~~~~~~~~~--  140 (270)
                      .+..++.-+||=+|  +|.|.....+++.+     +  .+++++..++.-++.+++.+.-    . ..++.... .+.  
T Consensus        35 l~~~~~~~~VLDiG--cG~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~-~~~~~  111 (280)
T d1jqea_          35 IGDTKSEIKILSIG--GGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKE-TSSEY  111 (280)
T ss_dssp             TTTTCSEEEEEEET--CTTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECS-CHHHH
T ss_pred             hccCCCCCeEEEEc--CCCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhh-hhhhh
Confidence            33445555799888  55666655555432     2  3678899898888888754432    1 12333332 232  


Q ss_pred             -HHHHhHcC-CCccEEEeCCC-----c--chHHHHHHccccCCEEEEEcc
Q 042426          141 -AALNRCFP-EGIDIYFENVG-----G--KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       141 -~~i~~~~~-~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~  181 (270)
                       ........ +.||+|+-.-.     .  ..+..+.++|+|+|.++....
T Consensus       112 ~~~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         112 QSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             HHHHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             cchhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence             22222222 37999987443     1  278889999999998876643

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=94.64  E-value=0.029  Score=43.88  Aligned_cols=74  Identities=11%  Similarity=0.038  Sum_probs=46.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCce-eecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFDDA-FNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +|||+||+|-+|..+++.+...| .+|+++++...+...+.+.-....+ .|.++..++.+.+.+    ++|+|+.+++-
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~----~~d~Vih~a~~   77 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK----KCDVVLPLVAI   77 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH----HCSEEEECBCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHh----CCCcccccccc
Confidence            69999999999999998877777 5999998765544433311111111 122222134443332    38999998873

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.64  E-value=0.074  Score=41.01  Aligned_cols=97  Identities=13%  Similarity=0.104  Sum_probs=62.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC-Cceeec-----CCchhHHHHHHhHcCCCcc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF-DDAFNY-----KEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~-~~vi~~-----~~~~~~~~~i~~~~~~~~d  152 (270)
                      ...+|||+|  ||-|..+-.++++... +|.++..+++-.+.+++-+.. ...++.     ... |..+.+++ +.+.||
T Consensus       106 ~pk~VLIiG--gG~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~-Da~~~l~~-~~~~yD  181 (312)
T d2b2ca1         106 DPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEFD  181 (312)
T ss_dssp             SCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCEE
T ss_pred             CCCeEEEeC--CCchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEc-hHHHHHHh-CCCCCC
Confidence            446899999  4556666677787775 899999999888888833332 111111     111 44555554 444799


Q ss_pred             EEEeCCC-----------cchHHHHHHccccCCEEEEEc
Q 042426          153 IYFENVG-----------GKMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       153 ~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +|+--..           .+.++.+.++|+++|.++.-+
T Consensus       182 vII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         182 VIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             EEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             EEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            9874221           125788899999999998643

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.64  E-value=0.016  Score=43.24  Aligned_cols=90  Identities=16%  Similarity=0.095  Sum_probs=59.0

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhH-cCCCccEE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRC-FPEGIDIY  154 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~-~~~~~d~v  154 (270)
                      .++.+||=.|  +|.|..+..+++ .|.+|++++.|++-++.++++.   +..  +..... ++    .+. .++.||+|
T Consensus        36 ~~~~~vLDiG--CG~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~--v~~~~~-d~----~~~~~~~~fD~i  105 (246)
T d1y8ca_          36 LVFDDYLDLA--CGTGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLK--PRLACQ-DI----SNLNINRKFDLI  105 (246)
T ss_dssp             CCTTEEEEET--CTTSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCC--CEEECC-CG----GGCCCSCCEEEE
T ss_pred             CCCCeEEEEe--CcCCHHHHHHHH-hCCccEeeccchhhhhhccccccccCcc--ceeecc-ch----hhhccccccccc
Confidence            3457899988  567777777766 4889999999999888776433   332  111111 11    111 13379999


Q ss_pred             EeCCCc-----------chHHHHHHccccCCEEEE
Q 042426          155 FENVGG-----------KMLDAVLLNMRICGHIAV  178 (270)
Q Consensus       155 ~d~~g~-----------~~~~~~~~~l~~~G~~v~  178 (270)
                      +...+.           ..++.+.++|+|+|.++.
T Consensus       106 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         106 TCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             ceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            864331           156788889999999874

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=94.63  E-value=0.023  Score=40.43  Aligned_cols=94  Identities=9%  Similarity=-0.039  Sum_probs=55.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEeCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFENVGG  160 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~  160 (270)
                      +|.|.||||-+|+-.++++..+- .++..++++...-+.+. +.... ...+........    +....+.|++|-|...
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~Dvvf~alp~   81 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFG-SVFPHLITQDLPNLVAVK----DADFSNVDAVFCCLPH   81 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHH-HHCGGGTTSCCCCCBCGG----GCCGGGCSEEEECCSS
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccc-cccccccccccccchhhh----hhhhcccceeeecccc
Confidence            68999999999999999998775 47766654332222222 11110 000000000000    0001148999999998


Q ss_pred             chHHHHHHccccCCEEEEEcc
Q 042426          161 KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       161 ~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .........+...+..+....
T Consensus        82 ~~s~~~~~~l~~~~~~v~~~~  102 (183)
T d2cvoa1          82 GTTQEIIKGLPQELKIVDLSA  102 (183)
T ss_dssp             SHHHHHHHTSCSSCEEEECSS
T ss_pred             chHHHHHHHHHhcCcccccch
Confidence            877777778888888776543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.56  E-value=0.023  Score=44.90  Aligned_cols=73  Identities=19%  Similarity=0.308  Sum_probs=46.1

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      ..-+|||+||+|=+|..++..+...|.+|+++++....... . .....  ...|..+   ........  .++|.|+.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~-~~~~~~~~~~D~~~---~~~~~~~~--~~~d~Vih~   86 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-E-DMFCDEFHLVDLRV---MENCLKVT--EGVDHVFNL   86 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-G-GGTCSEEEECCTTS---HHHHHHHH--TTCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-h-hcccCcEEEeechh---HHHHHHHh--hcCCeEeec
Confidence            35689999999999999999999999999999754332111 1 11111  2233333   22222222  248999998


Q ss_pred             CC
Q 042426          158 VG  159 (270)
Q Consensus       158 ~g  159 (270)
                      ++
T Consensus        87 a~   88 (363)
T d2c5aa1          87 AA   88 (363)
T ss_dssp             CC
T ss_pred             cc
Confidence            75

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=94.55  E-value=0.27  Score=34.08  Aligned_cols=98  Identities=14%  Similarity=0.046  Sum_probs=54.5

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      ++.+|.+||=.++  |.|...+.. ...|++++.+..+++..+.+++   ..+...-+...+.+.+.... ....+.||+
T Consensus        38 ~~~~g~~vLDl~~--G~G~~~i~a-~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~~-~~~~~~fD~  113 (171)
T d1ws6a1          38 RYPRRGRFLDPFA--GSGAVGLEA-ASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEA-KAQGERFTV  113 (171)
T ss_dssp             HCTTCCEEEEETC--SSCHHHHHH-HHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHH-HHTTCCEEE
T ss_pred             cccCCCeEEEecc--ccchhhhhh-hhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhcccccc-cccCCccce
Confidence            4677888887763  333344443 3458999999999888776652   45654222222221222222 222337999


Q ss_pred             EEeCC----Cc-chHHHHH--HccccCCEEEE
Q 042426          154 YFENV----GG-KMLDAVL--LNMRICGHIAV  178 (270)
Q Consensus       154 v~d~~----g~-~~~~~~~--~~l~~~G~~v~  178 (270)
                      ||---    +- ..+...+  .+++++|.++.
T Consensus       114 If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi  145 (171)
T d1ws6a1         114 AFMAPPYAMDLAALFGELLASGLVEAGGLYVL  145 (171)
T ss_dssp             EEECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred             eEEccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence            97421    11 2333333  36888887764

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.43  E-value=0.042  Score=35.74  Aligned_cols=34  Identities=18%  Similarity=0.119  Sum_probs=30.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      ..+++|.|| |.+|+-+++.+..+|.+|+++.+.+
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            378999998 9999999999999999999999764

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.35  E-value=0.02  Score=34.30  Aligned_cols=34  Identities=24%  Similarity=0.248  Sum_probs=30.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE  116 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~  116 (270)
                      .+|.|+|+ |-.|.|.++-++.+|+++++.+.+++
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            37899997 99999999999999999999996543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.34  E-value=0.048  Score=35.53  Aligned_cols=37  Identities=16%  Similarity=0.123  Sum_probs=32.4

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      ++...+++|.|| |.+|+-++..++.+|.+|+++.+++
T Consensus        19 l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          19 IKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             cCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            445679999998 9999999999999999999999763

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.22  E-value=0.021  Score=40.70  Aligned_cols=35  Identities=11%  Similarity=0.139  Sum_probs=30.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKE  116 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~  116 (270)
                      +.+|+|+|| |..|+.++..+..+|. +|+++.+++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            468999998 9999999999999998 5889887653

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=94.20  E-value=0.79  Score=34.55  Aligned_cols=106  Identities=14%  Similarity=0.116  Sum_probs=66.2

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCceeecCCc--------------
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR---SKEKVDLLKHKFGFDDAFNYKEE--------------  136 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~---~~~~~~~~~~~~g~~~vi~~~~~--------------  136 (270)
                      +.+.+.++.+|... .+|+.|++++..|+.+|.+++++..   ++.+.+.++ .+|+.-++...+.              
T Consensus        53 ~~g~~~~~~~vv~a-SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v~~v~~~~~~~~a~~~~~~~~~  130 (292)
T d2bhsa1          53 KRGEIKPGDVLIEA-TSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMR-AYGAELILVTKEQGMEGARDLALEMAN  130 (292)
T ss_dssp             HTTSCCTTSEEEEE-CCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHH-HTTCEEEEECTTTHHHHHHHHHHHHHH
T ss_pred             HhCCcCCCceeeee-cccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHH-HhCCCcceeecccchHHHHHHHhhccc
Confidence            34556666655554 4699999999999999997666654   556777777 8888522211111              


Q ss_pred             -------------h-------hHHHHHHhHcCCCccEEEeCCCcc----hHHHHHHccccCCEEEEEcc
Q 042426          137 -------------P-------DLDAALNRCFPEGIDIYFENVGGK----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       137 -------------~-------~~~~~i~~~~~~~~d~v~d~~g~~----~~~~~~~~l~~~G~~v~~g~  181 (270)
                                   .       .....+.+..++.+|.++-++|+.    -+...++...+..+++.+..
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         131 RGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             HTSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             cccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                         0       011122233344689999988863    34456666777888776543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.19  E-value=0.029  Score=41.91  Aligned_cols=34  Identities=18%  Similarity=0.136  Sum_probs=30.4

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      ..++|+|+|| |..|++++..+...|.+|+++.++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3578999998 999999999999999999999864

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.05  E-value=0.079  Score=34.75  Aligned_cols=41  Identities=15%  Similarity=0.023  Sum_probs=33.7

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      ....-..+.+|+|.|| |.+|+-+++.+..+|.+|+++.+.+
T Consensus        23 ~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          23 QKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             HHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             HHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            3333445679999998 9999999999999999999998653

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.01  E-value=0.12  Score=39.04  Aligned_cols=96  Identities=14%  Similarity=0.062  Sum_probs=59.1

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-e-----------eecCCchhHHHHHHhH
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDD-A-----------FNYKEEPDLDAALNRC  146 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v-----------i~~~~~~~~~~~i~~~  146 (270)
                      .+..+|||+|+  |.|..+-.++++-..+|.++..+++-.+.+++-++... .           +..... |..+.+++ 
T Consensus        71 ~~p~~vLiiG~--G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~-Da~~~l~~-  146 (276)
T d1mjfa_          71 PKPKRVLVIGG--GDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG-DGFEFIKN-  146 (276)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES-CHHHHHHH-
T ss_pred             CCCceEEEecC--CchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEC-hHHHHHhc-
Confidence            44578999995  44444455566544589999999888888874443211 0           011111 34444543 


Q ss_pred             cCCCccEEEe-CCCc----------chHHHHHHccccCCEEEEE
Q 042426          147 FPEGIDIYFE-NVGG----------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       147 ~~~~~d~v~d-~~g~----------~~~~~~~~~l~~~G~~v~~  179 (270)
                       .+.||+|+- +...          +.++.+.++|+++|.++.-
T Consensus       147 -~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q  189 (276)
T d1mjfa_         147 -NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  189 (276)
T ss_dssp             -CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             -cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEe
Confidence             246998864 3321          2478899999999998753

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.91  E-value=0.044  Score=38.69  Aligned_cols=37  Identities=16%  Similarity=0.051  Sum_probs=32.9

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      ...+.+|+|.|| |+.|+.++..+...|.+|++..+.+
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            345679999998 9999999999999999999999764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.90  E-value=0.062  Score=35.04  Aligned_cols=46  Identities=20%  Similarity=0.216  Sum_probs=36.5

Q ss_pred             hhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           66 LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        66 ~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .+++.++ +...  ..++++|+|+ |.+|+-.++.++.+|.+|.++.+++
T Consensus        10 ~~s~~~l-~l~~--~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          10 VDSTGAL-DFQN--VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             EEHHHHT-SCSS--CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EchhHhh-Cccc--CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            4566666 3332  3478999998 9999999999999999999999663

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.89  E-value=1.1  Score=34.95  Aligned_cols=106  Identities=17%  Similarity=0.120  Sum_probs=66.2

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCceeec-C-------Cc------
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR---SKEKVDLLKHKFGFDDAFNY-K-------EE------  136 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~---~~~~~~~~~~~~g~~~vi~~-~-------~~------  136 (270)
                      +.+.++++..|+. ..+|+.|.+++..|+.+|++++++..   ++.+.+.++ .+|++-+... .       ..      
T Consensus        90 ~~g~~~~~~~vv~-aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~-~~GA~vv~v~~~~~~~~~~~~~~~~~~  167 (355)
T d1jbqa_          90 RDGTLKPGDTIIE-PTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLR-ALGAEIVRTPTNARFDSPESHVGVAWR  167 (355)
T ss_dssp             HHTCSCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHH-HTTCEEEECCC-------CCHHHHHHH
T ss_pred             HcCCcccCceEEE-ecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHH-hcCCeEEEecccccchhhhhhhhHHHH
Confidence            3455666665555 45699999999999999997777664   456788887 8988632210 0       00      


Q ss_pred             ------------------------hhHHHHHHhHcCCCccEEEeCCCcc----hHHHHHHccccCCEEEEEcc
Q 042426          137 ------------------------PDLDAALNRCFPEGIDIYFENVGGK----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       137 ------------------------~~~~~~i~~~~~~~~d~v~d~~g~~----~~~~~~~~l~~~G~~v~~g~  181 (270)
                                              ......+.+..++.+|.++-++|+.    -+-..++...++-+++.+..
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep  240 (355)
T d1jbqa_         168 LKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP  240 (355)
T ss_dssp             HHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HHHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence                                    0011122222234689999999863    23445555667778876644

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=93.82  E-value=0.029  Score=44.11  Aligned_cols=37  Identities=22%  Similarity=0.197  Sum_probs=32.8

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEK  117 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~  117 (270)
                      ..+|+|+||+|.+|..++..+...|.+|++++|+..+
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence            3589999999999999999998899999999986553

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=93.82  E-value=0.16  Score=37.74  Aligned_cols=99  Identities=14%  Similarity=0.112  Sum_probs=62.1

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCC
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ...+.+..+||=+|  +|.|..++.+++.. +.++++++. ++..+.+++   +.+....+..... ++.    +..+++
T Consensus        75 ~~d~~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~-D~~----~~~~~~  146 (253)
T d1tw3a2          75 AYDWTNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG-DFF----EPLPRK  146 (253)
T ss_dssp             HSCCTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC-CTT----SCCSSC
T ss_pred             hcCCccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccc-cch----hhcccc
Confidence            34566778999998  78899999999877 568888885 344444432   3343222222221 221    112236


Q ss_pred             ccEEEeCCC-----c----chHHHHHHccccCCEEEEEcc
Q 042426          151 IDIYFENVG-----G----KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       151 ~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +|+|+-..-     .    ..++++.+.|+|+|+++....
T Consensus       147 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         147 ADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             hhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            898875332     1    247888999999999988654

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.75  E-value=0.12  Score=35.37  Aligned_cols=146  Identities=14%  Similarity=0.067  Sum_probs=73.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhCCC-ceeecCCchhHHHHHHhHcCCCccEEEe
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGC---YVVGSARSKEKVDLLKHKFGFD-DAFNYKEEPDLDAALNRCFPEGIDIYFE  156 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~---~v~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~~~~d~v~d  156 (270)
                      |-+|.|.||||-+|+-+++++..+..   ++...+++...-+.+. ..... ...+..+. ++         ...|++|-
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~-~~~~~~~~~~~~~~-~~---------~~~d~~f~   69 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FKDQDITIEETTET-AF---------EGVDIALF   69 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEE-ETTEEEEEEECCTT-TT---------TTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccccc-ccCCcccccccchh-hh---------hhhhhhhh
Confidence            45799999999999999999987753   5555553311111110 00000 01111111 11         15899999


Q ss_pred             CCCcc-hHHHHHHccccCCEEEEEcccccccccCCCCccchHHHHhhcceeeeccccCcccchHHHHHHHHHHHHCCcee
Q 042426          157 NVGGK-MLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLV  235 (270)
Q Consensus       157 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  235 (270)
                      +.+.. ..+...+....+.+++..+..-.   ..+..+....++-.....-...-+. -+.=....+..+.-++++|.++
T Consensus        70 ~~~~~~s~~~~~~~~~~~~~VIDlSsdfR---~~~~~~~~~pe~n~~~~~~~~~iIA-nPgC~tt~i~~l~PL~~~~lik  145 (154)
T d2gz1a1          70 SAGSSTSAKYAPYAVKAGVVVVDNTSYFR---QNPDVPLVVPEVNAHALDAHNGIIA-CPNAAWNSVQIAETLHERGLVR  145 (154)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEECSSTTT---TCTTSCBCCHHHHGGGGGGCCSEEE-CCCTHHHHHHHHHHHHHTTCCS
T ss_pred             ccCccchhhHHhhhccccceehhcChhhh---ccCCcccccchhhHHHhcCcCceEE-CCCCHHHHHHHHHHHHHhcCCC
Confidence            99875 44555556667778887755321   1122222222222211110000000 0111123344467888999988


Q ss_pred             eeeeee
Q 042426          236 YVEDIA  241 (270)
Q Consensus       236 ~~~~~~  241 (270)
                      +.....
T Consensus       146 ~~~~~~  151 (154)
T d2gz1a1         146 PTAELK  151 (154)
T ss_dssp             CCSSCC
T ss_pred             ccceee
Confidence            875443

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=93.71  E-value=0.28  Score=35.57  Aligned_cols=91  Identities=11%  Similarity=0.170  Sum_probs=56.7

Q ss_pred             EEEEecCCchHHH-HHHHHHHHc-CCEEEEEe-CCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           83 YVYVSAASGAVGQ-LVGQFVKLV-GCYVVGSA-RSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        83 ~vlI~ga~g~vG~-~ai~la~~~-g~~v~~~~-~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      +|.|+|. |.+|. ..+...+.. ++++++++ +++++.+...++++..  .+..+.   ++.+.+.   ...+|+|+-|
T Consensus        35 riaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~---d~~ell~---~~~iD~V~I~  107 (221)
T d1h6da1          35 GYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYS---NFDKIAK---DPKIDAVYII  107 (221)
T ss_dssp             EEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSS---SGGGGGG---CTTCCEEEEC
T ss_pred             EEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccC---chhhhcc---cccceeeeec
Confidence            7999996 88886 344444433 67888665 5677777776688864  222233   3322222   1269999988


Q ss_pred             CCcc-hHHHHHHccccCCEEEEEcc
Q 042426          158 VGGK-MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       158 ~g~~-~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +... ....+.+++..+ .=+.+..
T Consensus       108 tp~~~H~~~~~~al~~g-k~v~~EK  131 (221)
T d1h6da1         108 LPNSLHAEFAIRAFKAG-KHVMCEK  131 (221)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEECS
T ss_pred             cchhhhhhHHHHhhhcc-hhhhcCC
Confidence            8764 667777777665 4455544

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=93.69  E-value=0.12  Score=39.10  Aligned_cols=97  Identities=12%  Similarity=0.118  Sum_probs=61.9

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh----CC--CceeecCCchhHHHHHHhHcCCCc
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKF----GF--DDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~----g~--~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      .+..+|||+|  ||-|..+-.++++.+. +|.++.-+++-.+.+++-+    ++  +.-++.... |..+.+++ +...+
T Consensus        74 ~~p~~vLiiG--gG~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~-D~~~~l~~-~~~~y  149 (274)
T d1iy9a_          74 PNPEHVLVVG--GGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD-DGFMHIAK-SENQY  149 (274)
T ss_dssp             SSCCEEEEES--CTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES-CSHHHHHT-CCSCE
T ss_pred             CCcceEEecC--CCCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec-hHHHHHhh-cCCCC
Confidence            3457899999  5556667777787765 8999999998888887333    22  100111111 33334443 33479


Q ss_pred             cEEEe-CCC----------cchHHHHHHccccCCEEEEE
Q 042426          152 DIYFE-NVG----------GKMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       152 d~v~d-~~g----------~~~~~~~~~~l~~~G~~v~~  179 (270)
                      |+|+- ...          .+.++.+.++|+++|.++.-
T Consensus       150 DvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q  188 (274)
T d1iy9a_         150 DVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ  188 (274)
T ss_dssp             EEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred             CEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEe
Confidence            99863 322          12578899999999998864

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.67  E-value=0.075  Score=34.77  Aligned_cols=37  Identities=11%  Similarity=0.150  Sum_probs=33.1

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      ++++.+++|.|| |.+|.-++..++.+|.+|+++.+++
T Consensus        27 ~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          27 LRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             hhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            567789999998 9999999999999999999999764

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.64  E-value=0.12  Score=39.39  Aligned_cols=96  Identities=11%  Similarity=0.119  Sum_probs=61.1

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC-------CceeecCCchhHHHHHHhHcCCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF-------DDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~-------~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ...++|||+|  ||-|..+-.++++.+. +|.++.-+++-.+.+++-+..       .++ +.... |..+.+++ +.+.
T Consensus        77 ~~pk~vLiiG--gG~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv-~i~~~-Da~~~l~~-~~~~  151 (285)
T d2o07a1          77 PNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKL-TLHVG-DGFEFMKQ-NQDA  151 (285)
T ss_dssp             SSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE-EEEES-CHHHHHHT-CSSC
T ss_pred             cCcCeEEEeC--CCchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCc-eEEEc-cHHHHHhc-CCCC
Confidence            3457899999  4556666677777665 899999899888888733310       111 11111 44445544 3347


Q ss_pred             ccEEE-eCCC----------cchHHHHHHccccCCEEEEE
Q 042426          151 IDIYF-ENVG----------GKMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       151 ~d~v~-d~~g----------~~~~~~~~~~l~~~G~~v~~  179 (270)
                      ||+|+ |...          .+.++.+.+.|+++|.++.-
T Consensus       152 yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q  191 (285)
T d2o07a1         152 FDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQ  191 (285)
T ss_dssp             EEEEEEECC-----------CHHHHHHHHHEEEEEEEEEE
T ss_pred             CCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEe
Confidence            99886 3322          12578889999999998864

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.63  E-value=0.061  Score=34.88  Aligned_cols=34  Identities=24%  Similarity=0.170  Sum_probs=30.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      ..+++|.|+ |.+|+-+++.++.+|.+|.++.+++
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            368999998 9999999999999999999999764

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.61  E-value=0.2  Score=35.08  Aligned_cols=92  Identities=13%  Similarity=0.124  Sum_probs=53.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCC--HHHHHHHHHHhCCCceeecCCc-----------hhHHHHHHhHcC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV-GCYVVGSARS--KEKVDLLKHKFGFDDAFNYKEE-----------PDLDAALNRCFP  148 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~--~~~~~~~~~~~g~~~vi~~~~~-----------~~~~~~i~~~~~  148 (270)
                      +|.|.|- |-+|..+++.+... +.+++++...  ......+. ..+..........           ..+.+...    
T Consensus         3 KVaINGf-GRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~----   76 (178)
T d1b7go1           3 NVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAH-RRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK----   76 (178)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHH-HTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH----
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhc-ccCcceeccCccceeccccceecCCchhhhhh----
Confidence            6899995 99999999988765 4688887642  22333333 3333211111100           01111111    


Q ss_pred             CCccEEEeCCCcc-hHHHHHHccccCCEEEEEcc
Q 042426          149 EGIDIYFENVGGK-MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       149 ~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~  181 (270)
                       ++|+|+||+|.- ..+.+-.+++.+-+++..+.
T Consensus        77 -~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~  109 (178)
T d1b7go1          77 -TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGG  109 (178)
T ss_dssp             -HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             -cCCEEEECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence             389999999974 44556666766657666544

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=93.55  E-value=0.13  Score=39.62  Aligned_cols=95  Identities=19%  Similarity=0.185  Sum_probs=60.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC-----C--CceeecCCchhHHHHHHhHcCCCc
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFG-----F--DDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g-----~--~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      ...+|||+|+  |.|..+-.++++... +|.++..+++-.+.+++-+.     .  +.-+..... |..+.+++ +++.|
T Consensus        77 ~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~-Da~~~l~~-~~~~y  152 (312)
T d1uira_          77 EPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVID-DARAYLER-TEERY  152 (312)
T ss_dssp             CCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES-CHHHHHHH-CCCCE
T ss_pred             CcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEc-hHHHHhhh-cCCcc
Confidence            4578999994  556666777777654 99999999988888774331     1  100111111 44555544 34479


Q ss_pred             cEEE-eC---CCc----------chHHHHHHccccCCEEEE
Q 042426          152 DIYF-EN---VGG----------KMLDAVLLNMRICGHIAV  178 (270)
Q Consensus       152 d~v~-d~---~g~----------~~~~~~~~~l~~~G~~v~  178 (270)
                      |+|+ |.   .+.          +.++.+.+.|+++|.++.
T Consensus       153 DvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~  193 (312)
T d1uira_         153 DVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGM  193 (312)
T ss_dssp             EEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEE
T ss_pred             cEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEE
Confidence            9986 33   121          246788999999998875

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.53  E-value=0.073  Score=34.87  Aligned_cols=34  Identities=15%  Similarity=0.181  Sum_probs=30.7

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      ..+++|+|| |.+|+-+++.+..+|.+|.++.+++
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            368999998 9999999999999999999999653

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.33  E-value=0.79  Score=31.65  Aligned_cols=97  Identities=14%  Similarity=0.141  Sum_probs=56.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEeCC--HHHHHHHHHHhCCCceeecCCc-hhHHH-------HHHhHcCCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVG-CYVVGSARS--KEKVDLLKHKFGFDDAFNYKEE-PDLDA-------ALNRCFPEGI  151 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~--~~~~~~~~~~~g~~~vi~~~~~-~~~~~-------~i~~~~~~~~  151 (270)
                      +|.|.|- |-+|..+.+.+...+ .+++.+...  ......+. +++.+......+. ..+.+       ...+.. .++
T Consensus         3 ~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~v   79 (171)
T d1cf2o1           3 AVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMAL-KKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEA   79 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHH-HTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTC
T ss_pred             EEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHH-hcCCceEecccccceeecccCcccCCChhHhh-cCC
Confidence            6899996 999999998876555 577776632  23334444 5554422211111 00100       000000 159


Q ss_pred             cEEEeCCCcc-hHHHHHHccccCCEEEEEccc
Q 042426          152 DIYFENVGGK-MLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       152 d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      |+|+||+|.- ..+.+-..+..+-+.+..+..
T Consensus        80 DvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          80 DIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             CEEEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            9999999973 555666778777787776553

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.32  E-value=0.34  Score=33.52  Aligned_cols=96  Identities=16%  Similarity=0.148  Sum_probs=64.1

Q ss_pred             cccCchhhhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchh
Q 042426           59 GILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPD  138 (270)
Q Consensus        59 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  138 (270)
                      +-+|+.....+..|.+..---.|.+|.|.|.+.-+|.-++.++...|+.|+.......+..                   
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~-------------------   77 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD-------------------   77 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH-------------------
Confidence            5566666666666654433346899999999999999999999999999998774322222                   


Q ss_pred             HHHHHHhHcCCCccEEEeCCCcchHHHHHHccccCCEEEEEcc
Q 042426          139 LDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       139 ~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~  181 (270)
                        +.+++     .|+++-++|.+.+ .--+.++++-.++.+|.
T Consensus        78 --~~~~~-----aDivi~a~G~~~~-i~~~~vk~g~iviDvgi  112 (170)
T d1a4ia1          78 --EEVNK-----GDILVVATGQPEM-VKGEWIKPGAIVIDCGI  112 (170)
T ss_dssp             --HHHTT-----CSEEEECCCCTTC-BCGGGSCTTCEEEECCC
T ss_pred             --HHHhh-----ccchhhccccccc-cccccccCCCeEeccCc
Confidence              12221     6777777776533 11346777777777765

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.32  E-value=0.12  Score=39.91  Aligned_cols=99  Identities=17%  Similarity=0.167  Sum_probs=54.3

Q ss_pred             HhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH--HHhCCCceeecCCchhHHHHHHhH-
Q 042426           71 GLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLK--HKFGFDDAFNYKEEPDLDAALNRC-  146 (270)
Q Consensus        71 ~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~--~~~g~~~vi~~~~~~~~~~~i~~~-  146 (270)
                      ++.+...+.+|.+||-+|+  |.|..++.+|+. |+ +|+++..++.-....+  .+.+....+..-.. +    +.+. 
T Consensus        26 ai~~~~~~~~~~~VLDiGc--G~G~lsl~aa~~-Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~-~----~~~l~   97 (311)
T d2fyta1          26 FIYQNPHIFKDKVVLDVGC--GTGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKG-K----IEEVH   97 (311)
T ss_dssp             HHHHCGGGTTTCEEEEETC--TTSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEES-C----TTTSC
T ss_pred             HHHhccccCCcCEEEEECC--CCCHHHHHHHHc-CCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEe-e----HHHhc
Confidence            4444445667899999984  467766666664 76 8999998875332221  13343211111111 1    1111 


Q ss_pred             cC-CCccEEEeC-CCc----c-----hHHHHHHccccCCEEE
Q 042426          147 FP-EGIDIYFEN-VGG----K-----MLDAVLLNMRICGHIA  177 (270)
Q Consensus       147 ~~-~~~d~v~d~-~g~----~-----~~~~~~~~l~~~G~~v  177 (270)
                      .+ +.+|+|+.- .+.    +     .+...-+.|+|+|+++
T Consensus        98 ~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1          98 LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             CccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            12 379999752 221    1     2223345799999886

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=93.25  E-value=0.035  Score=42.12  Aligned_cols=34  Identities=18%  Similarity=0.181  Sum_probs=30.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .+|||+||+|-+|..++..+...|.+|++++|+.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~   37 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRES   37 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCC
Confidence            5799999999999999999988899999999754

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=93.24  E-value=0.7  Score=32.59  Aligned_cols=106  Identities=16%  Similarity=0.186  Sum_probs=64.1

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCCc
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      ...++++.+ |-. +.|.|-.+-.+++.. +.+|++++++++..+.+++.+   +....+-..+..++...+.....+.+
T Consensus        19 l~~~~~~~~-lD~-t~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~v   96 (192)
T d1m6ya2          19 LKPEDEKII-LDC-TVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKV   96 (192)
T ss_dssp             HCCCTTCEE-EET-TCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCE
T ss_pred             hCCCCCCEE-EEe-cCCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCc
Confidence            356777755 333 355555555555554 679999999999998887443   32211212222245555555444478


Q ss_pred             cEEEeCCCc----------------chHHHHHHccccCCEEEEEcccc
Q 042426          152 DIYFENVGG----------------KMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       152 d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      |.|+=-.|-                ..+..+.+.|+++|+++.+..+.
T Consensus        97 dgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~s  144 (192)
T d1m6ya2          97 DGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFHS  144 (192)
T ss_dssp             EEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESSH
T ss_pred             ceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeecccc
Confidence            776432331                14667788999999998876543

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=93.23  E-value=0.13  Score=39.88  Aligned_cols=102  Identities=14%  Similarity=0.043  Sum_probs=60.0

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh---CCC-ceeecCCchhHHHHHHhH--cC
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKF---GFD-DAFNYKEEPDLDAALNRC--FP  148 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~---g~~-~vi~~~~~~~~~~~i~~~--~~  148 (270)
                      ..+.+|.+||=..  +++|-.++..+ ..|+ +|+.++.++...+.+++.+   |.+ .-+..-.. +..+.++..  .+
T Consensus       140 ~~~~~g~~VLdlf--~~~G~~sl~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~-d~~~~l~~~~~~~  215 (317)
T d2b78a2         140 NGSAAGKTVLNLF--SYTAAFSVAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVM-DVFDYFKYARRHH  215 (317)
T ss_dssp             HTTTBTCEEEEET--CTTTHHHHHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEES-CHHHHHHHHHHTT
T ss_pred             HHhhCCCceeecC--CCCcHHHHHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEc-cHHHHHHHHHhhc
Confidence            4567889998765  33344444433 3577 8999999988887776433   322 01111111 333334332  12


Q ss_pred             CCccEEEeC-C--Cc-------------chHHHHHHccccCCEEEEEcc
Q 042426          149 EGIDIYFEN-V--GG-------------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       149 ~~~d~v~d~-~--g~-------------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      +.||+|+-- -  +.             ..+..++++|+|+|.++.+.+
T Consensus       216 ~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         216 LTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             CCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             CCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            379988642 1  10             146678899999999998765

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.21  E-value=0.064  Score=35.15  Aligned_cols=33  Identities=24%  Similarity=0.134  Sum_probs=29.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      .++++|+|| |.+|+-.++.++.+|.+|.++.++
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            357999998 999999999999999999999854

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.21  E-value=0.66  Score=31.18  Aligned_cols=37  Identities=27%  Similarity=0.153  Sum_probs=30.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEK  117 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~  117 (270)
                      .+.+|.|+|+ |.+|...+..+...+.  +++..+..+++
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            4568999997 9999999888887775  79998877765

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.19  E-value=0.064  Score=35.21  Aligned_cols=34  Identities=21%  Similarity=0.190  Sum_probs=31.1

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .++++|+|+ |-+|+-+++.++.+|.+|.++.+++
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            478999998 9999999999999999999999764

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.08  E-value=0.19  Score=37.22  Aligned_cols=32  Identities=16%  Similarity=0.213  Sum_probs=27.7

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARS  114 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~  114 (270)
                      .+|+|.|+ |++|..+++.+...|. ++++++.+
T Consensus        31 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          31 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            58999997 9999999999999999 77777643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.04  E-value=0.34  Score=37.48  Aligned_cols=31  Identities=23%  Similarity=0.161  Sum_probs=28.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSA  112 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~  112 (270)
                      ++|||+||+|=+|..++..+...|.+|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            5899999999999999999988899999985

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.02  E-value=0.33  Score=33.85  Aligned_cols=89  Identities=11%  Similarity=0.011  Sum_probs=51.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHH---HHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVG-CYVVGSARSKEKVDLLK---HKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g-~~v~~~~~~~~~~~~~~---~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +|.|.||||-+|+-+++++..+- .++..+.++...-+.+.   ..+-....+...   +..+...     +.|++|-|.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~---~~~~~~~-----~~dvvf~a~   74 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEF---DPEKVSK-----NCDVLFTAL   74 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCC---CHHHHHH-----HCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhcccccccc---CHhHhcc-----ccceEEEcc
Confidence            68999999999999999998664 47766664432222222   011111122222   2222222     289999999


Q ss_pred             CcchHHHHHHccccCCEEEEEc
Q 042426          159 GGKMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       159 g~~~~~~~~~~l~~~G~~v~~g  180 (270)
                      +........... .+.+++..+
T Consensus        75 p~~~s~~~~~~~-~~~~VIDlS   95 (176)
T d1vkna1          75 PAGASYDLVREL-KGVKIIDLG   95 (176)
T ss_dssp             STTHHHHHHTTC-CSCEEEESS
T ss_pred             ccHHHHHHHHhh-ccceEEecC
Confidence            886554444432 455666654

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=92.94  E-value=0.25  Score=36.77  Aligned_cols=98  Identities=12%  Similarity=0.076  Sum_probs=62.0

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHHHHHhHcCCCc
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDAALNRCFPEGI  151 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~~~~  151 (270)
                      -.++...+||=+|  ||.|..+..+++.. +.++++++. ++..+.+++   +.|....+..... ++.+    -.+.++
T Consensus        77 ~d~~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~-d~~~----~~p~~~  148 (256)
T d1qzza2          77 YDWSAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG-DFFK----PLPVTA  148 (256)
T ss_dssp             SCCTTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-CTTS----CCSCCE
T ss_pred             CCCccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeee-eccc----cccccc
Confidence            3466777899998  78889999999987 679999985 555544442   3343222222111 2111    112368


Q ss_pred             cEEEeCCC-----c----chHHHHHHccccCCEEEEEcc
Q 042426          152 DIYFENVG-----G----KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       152 d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      |+++-..-     .    ..++++.+.|+|+|+++.+..
T Consensus       149 D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         149 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            88764322     1    247888999999999998765

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.90  E-value=0.072  Score=36.29  Aligned_cols=84  Identities=14%  Similarity=0.128  Sum_probs=51.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcchH
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKML  163 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~  163 (270)
                      |-++|. |.+|.+.++.++..+..+.+..|+.++.+.+.++.+.. ..+..+.      +     ...|+||=|+....+
T Consensus         2 IgfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~-~~~~~~~------~-----~~~DiVil~v~d~~i   68 (153)
T d2i76a2           2 LNFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGK-AATLEKH------P-----ELNGVVFVIVPDRYI   68 (153)
T ss_dssp             CEEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCC-CCSSCCC------C-----C---CEEECSCTTTH
T ss_pred             EEEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccccc-ccchhhh------h-----ccCcEEEEeccchhh
Confidence            346786 99999888776553333457789999999998555532 2222211      1     137999999988888


Q ss_pred             HHHHHccccCC-EEEEEc
Q 042426          164 DAVLLNMRICG-HIAVCG  180 (270)
Q Consensus       164 ~~~~~~l~~~G-~~v~~g  180 (270)
                      ......++..+ .++.+.
T Consensus        69 ~~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          69 KTVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             HHHHTTTCCSSCCEEECC
T ss_pred             hHHHhhhcccceeeeecc
Confidence            88888886544 445554

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.86  E-value=0.093  Score=33.85  Aligned_cols=34  Identities=18%  Similarity=0.209  Sum_probs=30.3

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .++++|.|| |.+|+-+++.++.+|.+|.++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            378999998 9999999999999999999998653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.85  E-value=0.058  Score=40.95  Aligned_cols=33  Identities=24%  Similarity=0.175  Sum_probs=29.6

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      |.+|+|+|| |..|++++..++..|.+|.++..+
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            468999998 999999999999999999999864

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.84  E-value=0.74  Score=35.36  Aligned_cols=41  Identities=15%  Similarity=0.237  Sum_probs=33.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR----SKEKVDLLK  122 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~----~~~~~~~~~  122 (270)
                      .+|||+||+|-+|..++..+...|.+|+++++    +..+.+.++
T Consensus        17 k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~   61 (341)
T d1sb8a_          17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVR   61 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHH
Confidence            57999999999999999999999999999874    334444444

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.83  E-value=0.11  Score=34.46  Aligned_cols=38  Identities=13%  Similarity=-0.002  Sum_probs=33.4

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .++++.+++|.|| |.+|+-++..++..|.+|.++.+++
T Consensus        31 ~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          31 QLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            4566789999998 9999999999999999999999764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.63  E-value=0.1  Score=34.30  Aligned_cols=33  Identities=12%  Similarity=0.153  Sum_probs=30.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      .++++|+|+ |-+|+-+++..+.+|.+|+++.++
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~   58 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMM   58 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEee
Confidence            578999998 999999999999999999999865

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=92.62  E-value=0.074  Score=40.22  Aligned_cols=62  Identities=10%  Similarity=0.172  Sum_probs=38.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +|||+||+|=+|..++..+...|. ++++.+...       .    ...|..+...+.+.+.+.   ++|+||.+++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~-------~----~~~Dl~~~~~~~~~i~~~---~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSK-------E----FCGDFSNPKGVAETVRKL---RPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCS-------S----SCCCTTCHHHHHHHHHHH---CCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCc-------c----ccCcCCCHHHHHHHHHHc---CCCEEEEecc
Confidence            699999999999999887776664 444443321       1    122344432333334332   4899999986

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.57  E-value=0.099  Score=34.32  Aligned_cols=33  Identities=12%  Similarity=0.109  Sum_probs=30.4

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .+++|.|+ |.+|+-++..++.+|.+|+++.+++
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            68999998 9999999999999999999999764

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.57  E-value=0.42  Score=32.22  Aligned_cols=39  Identities=21%  Similarity=0.182  Sum_probs=30.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK  122 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~  122 (270)
                      +|.|+|. |.+|+..+.-+...|.+|++..+++.+....+
T Consensus         2 kIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred             EEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence            5788986 99999999999889999988886655444333

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.47  E-value=0.086  Score=38.72  Aligned_cols=37  Identities=19%  Similarity=0.241  Sum_probs=32.5

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE  116 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~  116 (270)
                      +.+.+|+|+|| |..|+.++..++..|.+|.++..+++
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            45689999998 99999999999999999999986653

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.45  E-value=0.026  Score=38.39  Aligned_cols=89  Identities=11%  Similarity=-0.031  Sum_probs=49.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVG---CYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g---~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +|.|.||||-+|+-.++++..++   .++..++++...-+.+. ..+.+..+  .   +.    ......+.|++|-|.+
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~-~~~~~~~~--~---~~----~~~~~~~~d~vf~a~p   73 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FAESSLRV--G---DV----DSFDFSSVGLAFFAAA   73 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ETTEEEEC--E---EG----GGCCGGGCSEEEECSC
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee-eccccchh--c---cc----hhhhhccceEEEecCC
Confidence            68999999999999999996443   47776664432111111 11111111  0   00    0000115899999998


Q ss_pred             cchHHHHHH-ccccCCEEEEEcc
Q 042426          160 GKMLDAVLL-NMRICGHIAVCGM  181 (270)
Q Consensus       160 ~~~~~~~~~-~l~~~G~~v~~g~  181 (270)
                      ......... ....+.+++..+.
T Consensus        74 ~~~s~~~~~~~~~~g~~VID~Ss   96 (144)
T d2hjsa1          74 AEVSRAHAERARAAGCSVIDLSG   96 (144)
T ss_dssp             HHHHHHHHHHHHHTTCEEEETTC
T ss_pred             cchhhhhccccccCCceEEeech
Confidence            865544444 4455566666543

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=92.36  E-value=1  Score=32.02  Aligned_cols=106  Identities=12%  Similarity=0.049  Sum_probs=66.5

Q ss_pred             hhHHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeecCCchhHHH
Q 042426           66 LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH---KFGFDDAFNYKEEPDLDA  141 (270)
Q Consensus        66 ~ta~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~  141 (270)
                      -.-|..++.  +  ++..||=+|  +|.|..++.+|+.. +.+++++..+......+.+   +.+.+++--...  +...
T Consensus        19 ~~~w~~~F~--~--~~PlvLeIG--cG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~--Da~~   90 (204)
T d2fcaa1          19 KGKWNTVFG--N--DNPIHIEVG--TGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI--DADT   90 (204)
T ss_dssp             TTCHHHHHT--S--CCCEEEEEC--CTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC--CGGG
T ss_pred             HhHHHHHcC--C--CCceEEEEE--ecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc--chhh
Confidence            334666553  2  234667776  88899999999976 5699999999887766542   456664422222  2222


Q ss_pred             HHHhHcCCCccEEEeCCCc---------------chHHHHHHccccCCEEEEE
Q 042426          142 ALNRCFPEGIDIYFENVGG---------------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       142 ~i~~~~~~~~d~v~d~~g~---------------~~~~~~~~~l~~~G~~v~~  179 (270)
                      ......++.+|.|+-....               ..+....+.|+|||.+...
T Consensus        91 l~~~~~~~~~d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1          91 LTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             HHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             hhcccCchhhhccccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            2222223367776644322               2567888999999998775

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.25  E-value=0.04  Score=41.11  Aligned_cols=46  Identities=7%  Similarity=-0.190  Sum_probs=33.1

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK  124 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~  124 (270)
                      ...+|.+||=+|.  |.|...+.+++..+.+|++++-|+...+.+++.
T Consensus        48 ~~~~g~~vLDlGc--G~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~~   93 (257)
T d2a14a1          48 GGLQGDTLIDIGS--GPTIYQVLAACDSFQDITLSDFTDRNREELEKW   93 (257)
T ss_dssp             TSCCEEEEEESSC--TTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECC--CCCHhHHHHhccccCcEEEecCCHHHHHHHHHH
Confidence            4456788988884  456555555555444899999999999888744

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.19  E-value=0.2  Score=37.00  Aligned_cols=35  Identities=20%  Similarity=0.395  Sum_probs=31.1

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      -.|.+|+|.|. |.+|..+++++...|++|++++.+
T Consensus        29 l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeecc
Confidence            36789999997 999999999999999999988743

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.07  E-value=1.5  Score=31.83  Aligned_cols=34  Identities=29%  Similarity=0.392  Sum_probs=28.7

Q ss_pred             CCCcEEEEecCCchHHHHHHHHH-HHcCCEEEEEeC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFV-KLVGCYVVGSAR  113 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la-~~~g~~v~~~~~  113 (270)
                      -.|.+|+|.|. |.+|..+++.+ +..|++|+.++.
T Consensus        29 l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          29 PKKATVAVQGF-GNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             TTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeec
Confidence            35789999996 99999999887 568999988873

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.04  E-value=0.083  Score=35.94  Aligned_cols=33  Identities=18%  Similarity=0.202  Sum_probs=29.5

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR  113 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~  113 (270)
                      .|.+|||.|| |.+|+.-+..+...|++|++++.
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            4689999998 99999999999999999999864

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.87  E-value=0.11  Score=39.81  Aligned_cols=37  Identities=19%  Similarity=0.138  Sum_probs=31.5

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .....+|+|+|| |..|+.++..+...|.+|.++..++
T Consensus        27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            344568999998 9999999999988899999998653

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.83  E-value=0.69  Score=31.97  Aligned_cols=93  Identities=14%  Similarity=0.034  Sum_probs=57.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce----eecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDA----FNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~v----i~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +|-|+|. |.+|...+..+...|.+|++..+++++.+.+. +.+....    .....  +....+.. .. ..+.++.+.
T Consensus         3 kIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~-~~~~~~~~~~~~~~~~--~~~~~~~~-~~-~~~~~~~~~   76 (178)
T d1pgja2           3 DVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFM-KANASAPFAGNLKAFE--TMEAFAAS-LK-KPRKALILV   76 (178)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH-HHTTTSTTGGGEEECS--CHHHHHHH-BC-SSCEEEECC
T ss_pred             EEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HcCCccccccchhhhh--hhhHHHHh-cc-cceEEEEee
Confidence            4778886 99999998888888999999999999999887 4443211    11111  22222222 21 244555555


Q ss_pred             Ccc-----hHHHHHHccccCCEEEEEcc
Q 042426          159 GGK-----MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       159 g~~-----~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ...     .+......+.++..++..+.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~iii~~st  104 (178)
T d1pgja2          77 QAGAATDSTIEQLKKVFEKGDILVDTGN  104 (178)
T ss_dssp             CCSHHHHHHHHHHHHHCCTTCEEEECCC
T ss_pred             cCcchhhhhhhhhhhhccccceecccCc
Confidence            431     33455556666666666543

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.80  E-value=0.26  Score=30.59  Aligned_cols=49  Identities=14%  Similarity=0.144  Sum_probs=38.3

Q ss_pred             CCCCcEEEEecCCchHHHHH-HHHHHHcCCEEEEEeCCH-HHHHHHHHHhCCC
Q 042426           78 PKKGEYVYVSAASGAVGQLV-GQFVKLVGCYVVGSARSK-EKVDLLKHKFGFD  128 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~a-i~la~~~g~~v~~~~~~~-~~~~~~~~~~g~~  128 (270)
                      ++...++.++|- |++|+.+ +++++..|++|...+... ...+.+. +.|..
T Consensus         5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~-~~Gi~   55 (96)
T d1p3da1           5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA-QAGAK   55 (96)
T ss_dssp             CTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH-HTTCE
T ss_pred             chhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH-HCCCe
Confidence            455678999997 9999877 899999999999999753 3455666 67875

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=91.77  E-value=0.018  Score=40.03  Aligned_cols=92  Identities=18%  Similarity=0.146  Sum_probs=54.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhC----CC--ceeecCCchhHHHHHHhHcCCCccEEE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKHKFG----FD--DAFNYKEEPDLDAALNRCFPEGIDIYF  155 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~~~g----~~--~vi~~~~~~~~~~~i~~~~~~~~d~v~  155 (270)
                      +|.|+|++|-+|+++++++... +++++....++.....-+ ..|    ..  .+....   +..+.     ...+|+++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~-d~~~~~~~~~~~~~~~~---~~~~~-----~~~~DViI   76 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGS-DAGELAGAGKTGVTVQS---SLDAV-----KDDFDVFI   76 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSC-CTTCSSSSSCCSCCEES---CSTTT-----TTSCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccc-hhhhhhccccCCceeec---cHHHH-----hcccceEE
Confidence            6999999999999999988765 667776663322111100 111    10  000000   11111     12489999


Q ss_pred             eCCCcchHHHHHHccccCCEEEEEcccc
Q 042426          156 ENVGGKMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       156 d~~g~~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      |++..+.....++.....|.=+.+|.++
T Consensus        77 DFs~p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          77 DFTRPEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             EeccHHHHHHHHHHHHhccceeEEecCC
Confidence            9988777777777777777666666544

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.66  E-value=0.12  Score=39.85  Aligned_cols=92  Identities=22%  Similarity=0.173  Sum_probs=51.7

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH---HHhCCCceeecCCchhHHHHHHhH-cC-CC
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLK---HKFGFDDAFNYKEEPDLDAALNRC-FP-EG  150 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~---~~~g~~~vi~~~~~~~~~~~i~~~-~~-~~  150 (270)
                      .+.+|++||-+|+  |.|..++.+++ .|+ +|+++..++. ...++   +..+....+..-.. +    +.+. .+ +.
T Consensus        30 ~~~~~~~VLDiGc--G~G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~-~----~~~~~~~~~~  100 (316)
T d1oria_          30 HLFKDKVVLDVGS--GTGILCMFAAK-AGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKG-K----VEEVELPVEK  100 (316)
T ss_dssp             HHHTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEES-C----TTTCCCSSSC
T ss_pred             ccCCcCEEEEEec--CCcHHHHHHHH-hCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEec-c----HHHcccccce
Confidence            3557899999984  45777766666 576 8999997754 22222   13344322211111 1    1111 12 26


Q ss_pred             ccEEEeCC-Cc-----c----hHHHHHHccccCCEEE
Q 042426          151 IDIYFENV-GG-----K----MLDAVLLNMRICGHIA  177 (270)
Q Consensus       151 ~d~v~d~~-g~-----~----~~~~~~~~l~~~G~~v  177 (270)
                      +|+|+... +.     .    .+...-++|+|+|+++
T Consensus       101 ~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         101 VDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             EEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            89986532 21     1    3344567999999886

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.63  E-value=0.078  Score=40.16  Aligned_cols=32  Identities=31%  Similarity=0.360  Sum_probs=29.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .|+|.|| |..|++++..++..|.+|.++.+++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4899998 9999999999999999999998764

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=91.47  E-value=0.38  Score=32.34  Aligned_cols=37  Identities=22%  Similarity=0.158  Sum_probs=30.0

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKV  118 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~  118 (270)
                      ..+|.|.|+ |.+|...+..+...|.  +++..+..+++.
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            358999996 9999998888887774  899999877643

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=91.41  E-value=0.47  Score=30.92  Aligned_cols=90  Identities=10%  Similarity=-0.023  Sum_probs=59.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCCcc-
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGK-  161 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~-  161 (270)
                      +++|.|. |.+|+.+++.++  +.+|+++..++++.+.++ ..|... +. .+. .-.+.+++..-..++.++-+...+ 
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~-~~~~~~-i~-Gd~-~~~~~L~~a~i~~A~~vi~~~~~d~   74 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL-RSGANF-VH-GDP-TRVSDLEKANVRGARAVIVNLESDS   74 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH-HTTCEE-EE-SCT-TSHHHHHHTTCTTCSEEEECCSSHH
T ss_pred             EEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH-hcCccc-cc-ccc-CCHHHHHHhhhhcCcEEEEeccchh
Confidence            5788897 999998877664  456788888888888887 777643 32 222 223455554444688888887754 


Q ss_pred             ---hHHHHHHccccCCEEEEE
Q 042426          162 ---MLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       162 ---~~~~~~~~l~~~G~~v~~  179 (270)
                         ......+.+.|..+++..
T Consensus        75 ~n~~~~~~~r~~~~~~~iia~   95 (129)
T d2fy8a1          75 ETIHCILGIRKIDESVRIIAE   95 (129)
T ss_dssp             HHHHHHHHHHHHCSSSCEEEE
T ss_pred             hhHHHHHHHHHHCCCceEEEE
Confidence               344555667777766654

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=91.38  E-value=0.12  Score=34.99  Aligned_cols=90  Identities=21%  Similarity=0.141  Sum_probs=49.3

Q ss_pred             EEEEecCCchHHHHHHHHHHH-c---CCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKL-V---GCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENV  158 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~-~---g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~  158 (270)
                      +|.|.||||-+|+-.++++.. .   ..++...+++...-+. . .++-......... +. +.+     ..+|++|-|+
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~-~~~~~~~~~~~~~-~~-~~~-----~~~DvvF~al   72 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-P-NFGKDAGMLHDAF-DI-ESL-----KQLDAVITCQ   72 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-C-CSSSCCCBCEETT-CH-HHH-----TTCSEEEECS
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-c-ccCCcceeeeccc-ch-hhh-----ccccEEEEec
Confidence            589999999999999986542 2   2577666544221111 1 1221111111111 11 112     2489999999


Q ss_pred             CcchHHHHHHccccCC---EEEEEcc
Q 042426          159 GGKMLDAVLLNMRICG---HIAVCGM  181 (270)
Q Consensus       159 g~~~~~~~~~~l~~~G---~~v~~g~  181 (270)
                      ++.........+...|   .++..+.
T Consensus        73 p~~~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          73 GGSYTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             CHHHHHHHHHHHHHTTCCSEEEESSS
T ss_pred             CchHHHHHhHHHHHcCCceEEEeCCc
Confidence            9876666555555444   3555543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.33  E-value=0.19  Score=36.92  Aligned_cols=34  Identities=24%  Similarity=0.192  Sum_probs=30.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      +-.+|+|+|| |..|++++..+...|.+|.++.+.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3458999998 999999999999999999999864

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.26  E-value=0.12  Score=38.81  Aligned_cols=48  Identities=4%  Similarity=-0.260  Sum_probs=34.2

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG  126 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g  126 (270)
                      +...|.++|=.|.  |.|...+..+.....+|++++-++..++.+++.+.
T Consensus        51 g~~~g~~vLDiGc--G~g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~~~~   98 (263)
T d2g72a1          51 GEVSGRTLIDIGS--GPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQ   98 (263)
T ss_dssp             SCSCCSEEEEETC--TTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHT
T ss_pred             CCCCCcEEEEecc--CCCHHHHHHhcccCCeEEEEeCCHHHHHHHHHHHh
Confidence            3456789999985  34544444444445699999999999999985554

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.24  E-value=0.95  Score=34.05  Aligned_cols=100  Identities=14%  Similarity=0.260  Sum_probs=59.9

Q ss_pred             cCCCCCcEEEEecC-CchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH---HHhCCCceeecCCchhHHHHHHhHcCCC
Q 042426           76 CSPKKGEYVYVSAA-SGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLK---HKFGFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        76 ~~~~~g~~vlI~ga-~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~---~~~g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      ...++|++||=..| .|+-..   +++... +.+|++...+..+.+.++   +++|...+.-.........   ....+.
T Consensus        98 L~~~~g~~vLD~CAaPGgKt~---~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~---~~~~~~  171 (284)
T d1sqga2          98 LAPQNGEHILDLCAAPGGKTT---HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ---WCGEQQ  171 (284)
T ss_dssp             HCCCTTCEEEEESCTTCHHHH---HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHH---HHTTCC
T ss_pred             cCccccceeEeccCccccchh---hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccch---hccccc
Confidence            45788999988875 233333   334333 358999999888876665   2577753332222102111   112236


Q ss_pred             ccEEE-e--CCCcch--------------------------HHHHHHccccCCEEEEEcc
Q 042426          151 IDIYF-E--NVGGKM--------------------------LDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       151 ~d~v~-d--~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~  181 (270)
                      ||.|+ |  |+|...                          +..++++++++|++|....
T Consensus       172 fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsTC  231 (284)
T d1sqga2         172 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC  231 (284)
T ss_dssp             EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred             ccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEeee
Confidence            88775 4  666321                          4667889999999987654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.14  E-value=0.17  Score=32.98  Aligned_cols=36  Identities=14%  Similarity=0.099  Sum_probs=31.3

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      +.+.+++|.|| |.+|+-+++.+..+|.+|.++.+++
T Consensus        30 ~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hcCCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            34578999998 9999999999999999999998663

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.01  E-value=0.3  Score=32.65  Aligned_cols=35  Identities=17%  Similarity=0.156  Sum_probs=27.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKV  118 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~  118 (270)
                      +|.|.|+ |.+|..++..+...+.  ++...+..+++.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~   38 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRA   38 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccc
Confidence            5789997 9999988887776664  888888776544

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.01  E-value=0.32  Score=36.98  Aligned_cols=94  Identities=10%  Similarity=0.099  Sum_probs=59.4

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC------C-ceeecCCchhHHHHHHhHcCCCcc
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGF------D-DAFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~------~-~vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      ..+|||+|+  |-|..+-.++++.+. +|.++..+++-.+.+++-++.      + ++ ..... |..+.+++ ..+.||
T Consensus        90 pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv-~v~~~-Da~~~l~~-~~~~yD  164 (295)
T d1inla_          90 PKKVLIIGG--GDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRA-EIVIA-NGAEYVRK-FKNEFD  164 (295)
T ss_dssp             CCEEEEEEC--TTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE-EEEES-CHHHHGGG-CSSCEE
T ss_pred             CceEEEecC--CchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCc-EEEhh-hHHHHHhc-CCCCCC
Confidence            478999995  445556677777665 899999998888888732321      1 11 11111 44445544 334799


Q ss_pred             EEE-eCCC-----------cchHHHHHHccccCCEEEEE
Q 042426          153 IYF-ENVG-----------GKMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       153 ~v~-d~~g-----------~~~~~~~~~~l~~~G~~v~~  179 (270)
                      +|+ |+..           .+.++.+.+.|+++|.++.-
T Consensus       165 vIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q  203 (295)
T d1inla_         165 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE  203 (295)
T ss_dssp             EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEe
Confidence            886 3321           12578899999999998864

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=90.92  E-value=0.51  Score=28.68  Aligned_cols=45  Identities=22%  Similarity=0.250  Sum_probs=35.3

Q ss_pred             EEEEecCCchHHHHH-HHHHHHcCCEEEEEeCCH-HHHHHHHHHhCCCc
Q 042426           83 YVYVSAASGAVGQLV-GQFVKLVGCYVVGSARSK-EKVDLLKHKFGFDD  129 (270)
Q Consensus        83 ~vlI~ga~g~vG~~a-i~la~~~g~~v~~~~~~~-~~~~~~~~~~g~~~  129 (270)
                      +|-++|- ||+|+.+ +++++..|++|.+.+..+ +..+.++ +.|+..
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~-~~Gi~i   49 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR-KLGIPI   49 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HTTCCE
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH-HCCCeE
Confidence            5777886 9999855 688899999999999765 3556676 889763

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.92  E-value=0.13  Score=38.34  Aligned_cols=32  Identities=19%  Similarity=0.134  Sum_probs=27.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSK  115 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~  115 (270)
                      +|+|.|| |..|++++.+++..|. +|.++.+++
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            5899998 9999999999999997 888877653

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.91  E-value=1.5  Score=33.38  Aligned_cols=101  Identities=16%  Similarity=0.202  Sum_probs=62.0

Q ss_pred             hcCCCCCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH---HHhCCCceeecCCchhHHHHHHhHcCC
Q 042426           75 LCSPKKGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSKEKVDLLK---HKFGFDDAFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        75 ~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~~~~~~~~---~~~g~~~vi~~~~~~~~~~~i~~~~~~  149 (270)
                      ....++|++||=..|+.  |-=+.+++..++  ..+++.+.++.+.+.++   +++|...++..... ...  + ....+
T Consensus       111 ~l~~~~g~~vlD~CAap--GgKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d-~~~--~-~~~~~  184 (313)
T d1ixka_         111 ALDPKPGEIVADMAAAP--GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSS-SLH--I-GELNV  184 (313)
T ss_dssp             HHCCCTTCEEEECCSSC--SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSC-GGG--G-GGGCC
T ss_pred             cccCCccceeeecccch--hhhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhcccccccc-ccc--c-ccccc
Confidence            34678999988776522  222444555443  48999999988876665   26777655444332 111  1 11223


Q ss_pred             CccEEEe---CCCcc--------------------------hHHHHHHccccCCEEEEEcc
Q 042426          150 GIDIYFE---NVGGK--------------------------MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       150 ~~d~v~d---~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .||.|+=   |+|..                          .+..++++++++|++|....
T Consensus       185 ~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYsTC  245 (313)
T d1ixka_         185 EFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC  245 (313)
T ss_dssp             CEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred             cccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEeec
Confidence            6877754   55532                          15778889999999886654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.87  E-value=0.67  Score=31.04  Aligned_cols=90  Identities=17%  Similarity=0.183  Sum_probs=51.7

Q ss_pred             EEEEecCCchHHHHHHHHHH-HcC--CEEEEEeCCHHHHHHHHHHh-CCC-----ceeecCCchhHHHHHHhHcCCCccE
Q 042426           83 YVYVSAASGAVGQLVGQFVK-LVG--CYVVGSARSKEKVDLLKHKF-GFD-----DAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~-~~g--~~v~~~~~~~~~~~~~~~~~-g~~-----~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      +|.|+|++|.+|..++.++. ..+  .++...+..+.....+. .+ .+.     ..+. ... ++. .+.     +.|+
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~-Dl~h~~~~~~~~~~~-~~~-~~~-~~~-----~aDv   72 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAV-DLSHIPTAVKIKGFS-GED-ATP-ALE-----GADV   72 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHH-HHHTSCSSCEEEEEC-SSC-CHH-HHT-----TCSE
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHH-HHHCCccccCCcEEE-cCC-Ccc-ccC-----CCCE
Confidence            58899988999998877654 444  37888876543333333 22 221     1111 121 332 333     3899


Q ss_pred             EEeCCCcc---------h-------H---HHHHHccccCCEEEEEcc
Q 042426          154 YFENVGGK---------M-------L---DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       154 v~d~~g~~---------~-------~---~~~~~~l~~~G~~v~~g~  181 (270)
                      |+-+.|.+         .       +   ...+.-.+|++.++.+++
T Consensus        73 vvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          73 VLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             EEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence            99999842         1       1   223333457888888766

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.61  E-value=0.31  Score=36.25  Aligned_cols=34  Identities=18%  Similarity=0.121  Sum_probs=30.4

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR  113 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~  113 (270)
                      -.|.+|+|.|. |.+|..+++++...|++|++++.
T Consensus        34 l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          34 LVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             STTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence            35789999996 99999999999999999998874

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.57  E-value=0.2  Score=38.80  Aligned_cols=92  Identities=25%  Similarity=0.163  Sum_probs=51.2

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH---HHhCCCc-e--eecCCchhHHHHHHhHcC
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLK---HKFGFDD-A--FNYKEEPDLDAALNRCFP  148 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~---~~~g~~~-v--i~~~~~~~~~~~i~~~~~  148 (270)
                      ....+|.+||-+|  +|.|..++.+++ .|+ +|+++..++ ..+.++   ++.+... +  +...-. ++     ....
T Consensus        34 ~~~~~~~~VLDlG--cGtG~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~-~l-----~~~~  103 (328)
T d1g6q1_          34 KDLFKDKIVLDVG--CGTGILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLE-DV-----HLPF  103 (328)
T ss_dssp             HHHHTTCEEEEET--CTTSHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTT-TS-----CCSS
T ss_pred             cccCCcCEEEEeC--CCCCHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehh-hc-----cCcc
Confidence            3445789999998  456666665555 576 899999775 333332   1344432 2  211111 11     0112


Q ss_pred             CCccEEEeCC-C----c-c----hHHHHHHccccCCEEE
Q 042426          149 EGIDIYFENV-G----G-K----MLDAVLLNMRICGHIA  177 (270)
Q Consensus       149 ~~~d~v~d~~-g----~-~----~~~~~~~~l~~~G~~v  177 (270)
                      ..+|+|+... +    . .    .+...-++|+|+|+++
T Consensus       104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            3699987632 2    1 1    2344457899999886

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=90.33  E-value=1.2  Score=29.97  Aligned_cols=38  Identities=21%  Similarity=0.190  Sum_probs=30.1

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEK  117 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~  117 (270)
                      ++..+|.|+|+ |.+|..++.++...+. +++..+..+++
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            44568999997 9999988888877776 88888866543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=90.29  E-value=0.31  Score=37.10  Aligned_cols=32  Identities=16%  Similarity=0.245  Sum_probs=28.0

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR  113 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~  113 (270)
                      .+|||+||+|=+|..+++.+...|..++++..
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~   34 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT   34 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecC
Confidence            47999999999999999999888998877653

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=90.26  E-value=0.3  Score=38.27  Aligned_cols=73  Identities=8%  Similarity=0.125  Sum_probs=42.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEE-EEEeCCH--HHHHHHHHHh-CCCc----eeecCCchhHHHHHHhHcCCCccEE
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYV-VGSARSK--EKVDLLKHKF-GFDD----AFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v-~~~~~~~--~~~~~~~~~~-g~~~----vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      +|||+||+|=+|..++..+...|.++ +++.+..  .+.+.+. .+ +...    ..|-.+...+.+.+.+.   .+|+|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---~~d~V   77 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS-DISESNRYNFEHADICDSAEITRIFEQY---QPDAV   77 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT-TTTTCTTEEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHH-hhhhcCCcEEEEccCCCHHHHHHHHHhC---CCCEE
Confidence            69999999999999999888888864 4444211  1122222 11 1111    12444432333333332   48999


Q ss_pred             EeCCC
Q 042426          155 FENVG  159 (270)
Q Consensus       155 ~d~~g  159 (270)
                      +.+++
T Consensus        78 ihlAa   82 (361)
T d1kewa_          78 MHLAA   82 (361)
T ss_dssp             EECCS
T ss_pred             EECcc
Confidence            99986

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.22  E-value=0.21  Score=34.43  Aligned_cols=35  Identities=23%  Similarity=0.291  Sum_probs=28.9

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCH
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVG--CYVVGSARSK  115 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g--~~v~~~~~~~  115 (270)
                      .|.+|+|.|| |.+|+.+++.++.++  .+|+++.+.+
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4789999998 999999988888777  4888887554

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=90.20  E-value=0.074  Score=37.61  Aligned_cols=34  Identities=12%  Similarity=0.076  Sum_probs=29.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      ++..|+|+|+ |+.|+.++..+...|.+|+++.+.
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence            3467999998 999999999999999999999754

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=90.11  E-value=0.15  Score=35.42  Aligned_cols=99  Identities=13%  Similarity=0.126  Sum_probs=59.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCC-----CceeecCCc------hh----HHHHHH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSAR---SKEKVDLLKHKFGF-----DDAFNYKEE------PD----LDAALN  144 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~---~~~~~~~~~~~~g~-----~~vi~~~~~------~~----~~~~i~  144 (270)
                      +|.|.|- |-+|..+...+...+.+++++-.   +.+....+- ++-.     +.-+...+.      ..    -.....
T Consensus         2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLl-kyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~   79 (169)
T d1dssg1           2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMF-KYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPE   79 (169)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHH-HCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             eEEEECC-cHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHH-hcccccCCcCCeEEEeCCEEEECCEEEEEEecCChH
Confidence            5889997 99999999988777888887764   234555554 3211     000000000      00    000111


Q ss_pred             hHcCC--CccEEEeCCCc-chHHHHHHccccCCEEEEEcccc
Q 042426          145 RCFPE--GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       145 ~~~~~--~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +...+  ++|+|+||+|. ...+.+...+..+.+-|.+..+.
T Consensus        80 ~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          80 NIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             GCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             HCCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence            11112  69999999997 46677888888887667666543

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.10  E-value=1.9  Score=29.47  Aligned_cols=98  Identities=13%  Similarity=0.094  Sum_probs=57.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHhCC-----CceeecCCch----------hHHHHHHh
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARS--KEKVDLLKHKFGF-----DDAFNYKEEP----------DLDAALNR  145 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~--~~~~~~~~~~~g~-----~~vi~~~~~~----------~~~~~i~~  145 (270)
                      +|.|.|- |-+|..+.+.+...+.+|+++-..  .+....+- ++-.     ...+...+..          .......+
T Consensus         2 kigINGf-GRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl-~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~   79 (168)
T d2g82a1           2 KVGINGF-GRIGRQVFRILHSRGVEVALINDLTDNKTLAHLL-KYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE   79 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECC-cHHHHHHHHHHhcCCCEEEEECCCcchhhhhhee-ecccccCccccccccccceeEecceeEEEEecCChHH
Confidence            5889997 999999999887778888887743  23333333 2211     0001111000          00001122


Q ss_pred             HcCC--CccEEEeCCCc-chHHHHHHccccCCEEEEEccc
Q 042426          146 CFPE--GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       146 ~~~~--~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      ...+  ++|+|+||+|. ...+.+..++..+.+=|.++.+
T Consensus        80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP  119 (168)
T d2g82a1          80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAP  119 (168)
T ss_dssp             CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             CcccccCCceeEeccccccchHHhhhhhccccceeeeccc
Confidence            2222  79999999997 4666777788877655555543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.09  E-value=0.17  Score=39.18  Aligned_cols=33  Identities=24%  Similarity=0.391  Sum_probs=29.4

Q ss_pred             EE-EEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           83 YV-YVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        83 ~v-lI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      +| ||+||+|=+|..++..+...|++|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            47 9999999999999999888999999999743

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=89.87  E-value=0.94  Score=35.04  Aligned_cols=95  Identities=12%  Similarity=0.056  Sum_probs=63.4

Q ss_pred             CCCcEEEEecCCchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFV-KLVGC-YVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la-~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      +...++.|+|+ |..+.+.++.. ..++. +|.+..+++++.+.+.+++...  .-+...+  +..+.++.     .|+|
T Consensus       126 ~da~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~--s~~eav~~-----ADIi  197 (340)
T d1x7da_         126 PNARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRAS--SVAEAVKG-----VDII  197 (340)
T ss_dssp             TTCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECS--SHHHHHTT-----CSEE
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecC--CHHHHHhc-----CCce
Confidence            34578999996 98888777755 56677 8999999988766555455431  1121222  55555544     8999


Q ss_pred             EeCCCc----chHHHHHHccccCCEEEEEcccc
Q 042426          155 FENVGG----KMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       155 ~d~~g~----~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +-|+.+    +.+.  .+.++|+-++..+|...
T Consensus       198 ~t~Tas~s~~Pv~~--~~~l~pG~hI~aiGs~~  228 (340)
T d1x7da_         198 TTVTADKAYATIIT--PDMLEPGMHLNAVGGDC  228 (340)
T ss_dssp             EECCCCSSEEEEEC--GGGCCTTCEEEECSCCB
T ss_pred             eeccccCCCCcccc--hhhcCCCCEEeecccch
Confidence            987753    2333  25789998988988744

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.84  E-value=0.73  Score=36.27  Aligned_cols=90  Identities=17%  Similarity=0.154  Sum_probs=59.8

Q ss_pred             cCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh---CCCc--------------eeecCCchhHHHHHHhHcCC
Q 042426           88 AASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKF---GFDD--------------AFNYKEEPDLDAALNRCFPE  149 (270)
Q Consensus        88 ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~---g~~~--------------vi~~~~~~~~~~~i~~~~~~  149 (270)
                      .+-++.|...+.+++..|+ +|++.+.+++..+.+++-+   +...              .+..... |....+.+ ...
T Consensus        51 D~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~-Da~~~~~~-~~~  128 (375)
T d2dula1          51 DALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHD-DANRLMAE-RHR  128 (375)
T ss_dssp             ESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEES-CHHHHHHH-STT
T ss_pred             EcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehh-hhhhhhHh-hcC
Confidence            3347889999999998888 8999999999888887332   2111              0111111 33333322 223


Q ss_pred             CccEE-EeCCCc--chHHHHHHccccCCEEEEE
Q 042426          150 GIDIY-FENVGG--KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       150 ~~d~v-~d~~g~--~~~~~~~~~l~~~G~~v~~  179 (270)
                      .||+| +|..|+  +.++.+++.++.+|.+...
T Consensus       129 ~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vT  161 (375)
T d2dula1         129 YFHFIDLDPFGSPMEFLDTALRSAKRRGILGVT  161 (375)
T ss_dssp             CEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCCcccCCCCCCcHHHHHHHHHHhccCCEEEEE
Confidence            68965 899987  4889999999988876543

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=89.75  E-value=0.18  Score=35.11  Aligned_cols=30  Identities=13%  Similarity=0.119  Sum_probs=27.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSAR  113 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~  113 (270)
                      .|+|+|| |+.|+.++..+...|.+|.++.+
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~~v~iie~   32 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGIRTGLMGE   32 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEECS
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCeEEEEEE
Confidence            4889998 99999999999999999999874

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.50  E-value=3.4  Score=31.39  Aligned_cols=107  Identities=16%  Similarity=0.129  Sum_probs=66.5

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCceeecC----------------
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR---SKEKVDLLKHKFGFDDAFNYK----------------  134 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~---~~~~~~~~~~~~g~~~vi~~~----------------  134 (270)
                      +.+.++++...+|...+|+.|++++..++.+|.+++++..   ++.+.+.++ .+|+..++...                
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~-~~Ga~vi~~~~~~~~~~~~~~~~~~~~  135 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILL-AFGVELVLTDPAKGMKGAIAKAEEILA  135 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHH-HTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhh-ccCcceEEeeccccccccchhHHHHHH
Confidence            3455666666677777899999999999999997666553   455777777 88875222110                


Q ss_pred             ------------Cch-------hHHHHHHhHcCCCccEEEeCCCcc-hH---HHHHHccccCCEEEEEcc
Q 042426          135 ------------EEP-------DLDAALNRCFPEGIDIYFENVGGK-ML---DAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       135 ------------~~~-------~~~~~i~~~~~~~~d~v~d~~g~~-~~---~~~~~~l~~~G~~v~~g~  181 (270)
                                  +..       .....+.+...+.+|.++-++|+. .+   ...++...+.-+++.+..
T Consensus       136 ~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve~  205 (320)
T d1z7wa1         136 KTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEP  205 (320)
T ss_dssp             HCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             hCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeecccc
Confidence                        000       011222333344689999999864 32   344555666777776543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=89.45  E-value=0.18  Score=37.32  Aligned_cols=32  Identities=22%  Similarity=0.212  Sum_probs=28.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKE  116 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~  116 (270)
                      |+|+|| |+.|++++..+...|.+|.++.+++.
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            889998 99999999999989999999997754

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=89.43  E-value=0.67  Score=30.90  Aligned_cols=34  Identities=29%  Similarity=0.139  Sum_probs=26.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEK  117 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~  117 (270)
                      +|.|+|+ |.+|...+..+...+.  +++..+..+++
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~   38 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEK   38 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence            5889997 9999999888887775  89998877654

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=89.35  E-value=0.47  Score=31.75  Aligned_cols=32  Identities=31%  Similarity=0.234  Sum_probs=26.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC--EEEEEeC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGC--YVVGSAR  113 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~  113 (270)
                      .+|.|.|++|.+|..++..+...+.  +++..+.
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di   34 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI   34 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEec
Confidence            3689999889999999998888876  6777663

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.35  E-value=0.27  Score=37.25  Aligned_cols=33  Identities=18%  Similarity=0.224  Sum_probs=30.0

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR  113 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~  113 (270)
                      .|.+|+|.|. |.+|..+++++...|++|++++.
T Consensus        35 ~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            4679999997 99999999999999999998874

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.32  E-value=0.3  Score=33.17  Aligned_cols=34  Identities=21%  Similarity=0.006  Sum_probs=28.3

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARS  114 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~  114 (270)
                      -+.+|+|+|| |.+|.-++..+..+|+ .|+++.+.
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeC
Confidence            3678999998 9999999988888998 57777764

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=89.27  E-value=2.2  Score=29.07  Aligned_cols=72  Identities=14%  Similarity=0.147  Sum_probs=41.9

Q ss_pred             CcEEEEecCCchHHH--HHHHHHHHcC----CEEEEEeCCHHHHHHHH-------HHhCCCceeecCCchhHHHHHHhHc
Q 042426           81 GEYVYVSAASGAVGQ--LVGQFVKLVG----CYVVGSARSKEKVDLLK-------HKFGFDDAFNYKEEPDLDAALNRCF  147 (270)
Q Consensus        81 g~~vlI~ga~g~vG~--~ai~la~~~g----~~v~~~~~~~~~~~~~~-------~~~g~~~vi~~~~~~~~~~~i~~~~  147 (270)
                      .-+|.|.|| |++|.  +...+++...    .+++..+.++++.+...       ...+....+....  +..+.+.   
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~eal~---   76 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT--DPEEAFT---   76 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES--CHHHHHS---
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC--ChhhccC---
Confidence            347899998 66653  3334444332    38999998887765322       1234432222222  4444443   


Q ss_pred             CCCccEEEeCCCc
Q 042426          148 PEGIDIYFENVGG  160 (270)
Q Consensus       148 ~~~~d~v~d~~g~  160 (270)
                        +.|+|+.++|-
T Consensus        77 --~AD~Vvitag~   87 (167)
T d1u8xx1          77 --DVDFVMAHIRV   87 (167)
T ss_dssp             --SCSEEEECCCT
T ss_pred             --CCCEEEECCCc
Confidence              49999999984

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=88.98  E-value=1.4  Score=34.40  Aligned_cols=31  Identities=19%  Similarity=0.180  Sum_probs=26.1

Q ss_pred             cEEEEecCCchHHHHHHH-HHHHcCCEEEEEe
Q 042426           82 EYVYVSAASGAVGQLVGQ-FVKLVGCYVVGSA  112 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~-la~~~g~~v~~~~  112 (270)
                      -+|||+||+|=+|..++. |++..|.+|++++
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            479999999999987765 5577899999986

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.80  E-value=0.43  Score=32.25  Aligned_cols=47  Identities=15%  Similarity=0.044  Sum_probs=38.2

Q ss_pred             hhHHHHhhhhcCCCCCcEEEEe--cCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           66 LTAYGGLHELCSPKKGEYVYVS--AASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        66 ~ta~~~l~~~~~~~~g~~vlI~--ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .|....+.  .+..++..++|+  |+ |-+|+.+++.+..+|.+|.++.+.+
T Consensus        26 ~t~~d~l~--~~~~~~~~vvi~d~gg-g~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          26 LTPEQVMD--GKKKIGKRVVILNADT-YFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             ECHHHHHH--TCSCCCSEEEEEECCC-SSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ECHHHHhc--CccccCCceEEEecCC-ChHHHHHHHHHHHcCCeEEEEecCC
Confidence            46676663  456778888887  54 8999999999999999999999764

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=88.74  E-value=0.22  Score=36.58  Aligned_cols=31  Identities=19%  Similarity=0.169  Sum_probs=27.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      |+|+|| |..|++++..+...|.+|.++.+++
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            789998 9999999888888899999998754

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.69  E-value=0.21  Score=35.87  Aligned_cols=30  Identities=13%  Similarity=0.142  Sum_probs=27.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      |+|+|+ |+.|+.++..+..+|.+|.++...
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            788898 999999999999999999999754

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=88.65  E-value=2.2  Score=29.36  Aligned_cols=99  Identities=8%  Similarity=0.010  Sum_probs=56.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHc----CCEEEEEeC--CHHHHHHHHHHhCC-----CceeecCCch--------h--HHH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV----GCYVVGSAR--SKEKVDLLKHKFGF-----DDAFNYKEEP--------D--LDA  141 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~----g~~v~~~~~--~~~~~~~~~~~~g~-----~~vi~~~~~~--------~--~~~  141 (270)
                      +|.|.|- |-+|..+...+-..    ..+|+++-.  +.+....+- ++-.     ..-+...+..        .  -..
T Consensus         3 kigINGf-GRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~   80 (173)
T d1obfo1           3 RVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLT-RYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR   80 (173)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhh-cccccCCCcCceEEeccceEEECCEEEEEEecC
Confidence            5899997 99999888766432    346777763  334444443 2211     0001000000        0  000


Q ss_pred             HHHhHcCC--CccEEEeCCCc-chHHHHHHccccCCEEEEEcccc
Q 042426          142 ALNRCFPE--GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       142 ~i~~~~~~--~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      .+.+...+  ++|+|+||+|. ...+.+...|..+.+-|.+..+.
T Consensus        81 ~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  125 (173)
T d1obfo1          81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG  125 (173)
T ss_dssp             CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             CHHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence            12222222  79999999997 46677888888887777766543

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=88.63  E-value=0.19  Score=37.00  Aligned_cols=32  Identities=19%  Similarity=0.136  Sum_probs=27.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSK  115 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~  115 (270)
                      +|+|+|| |..|+.++..++..|. +|+++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            5899998 9999999999998997 699988653

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.60  E-value=0.18  Score=34.99  Aligned_cols=32  Identities=16%  Similarity=0.049  Sum_probs=26.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSA  112 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~  112 (270)
                      ++++|+|.|+ |.+|+.++..++.+|.++.++.
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            4689999998 9999999999999998654443

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=88.54  E-value=2.6  Score=32.11  Aligned_cols=110  Identities=20%  Similarity=0.152  Sum_probs=64.7

Q ss_pred             HHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCceeecCCch-------
Q 042426           68 AYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR---SKEKVDLLKHKFGFDDAFNYKEEP-------  137 (270)
Q Consensus        68 a~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~---~~~~~~~~~~~~g~~~vi~~~~~~-------  137 (270)
                      |++.+.....-.+...|+. ..+|+.|.+++..++.+|.+++++..   ++.+.+.++ .+|+.-+.......       
T Consensus        62 a~~~i~~~~~~~~~~~vv~-assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~-~~Ga~vi~~~~~~~~~~~~~~  139 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVIT-ASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVR-GFGGEVLLHGANFDEAKAKAI  139 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEE-EECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHH-HHSCEEECCCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeee-cccchhHHHHHHhhccccccceeeccccchhHHHHHHH-hcCCEEEEcCcccccchhhhh
Confidence            4455543333233344444 44699999999999999997776663   445777777 88875322111110       


Q ss_pred             ------------------------hHHHHHHhHcCCCccEEEeCCCcc----hHHHHHHccccCCEEEEEc
Q 042426          138 ------------------------DLDAALNRCFPEGIDIYFENVGGK----MLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       138 ------------------------~~~~~i~~~~~~~~d~v~d~~g~~----~~~~~~~~l~~~G~~v~~g  180 (270)
                                              .....+.+.. +.+|.+|-++|+.    -+...++.+.++.+++.+.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         140 ELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHC-TTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhhhcCCCccccccCChHHhhhhhhHHHHHHHhc-CCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                                    0111122222 2589999999863    2345555666777887764

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=88.45  E-value=1  Score=30.01  Aligned_cols=36  Identities=31%  Similarity=0.277  Sum_probs=29.6

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKV  118 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~~  118 (270)
                      .+|.|+|+ |.+|..++..+...+.  +++.++..+++.
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~   39 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERV   39 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence            46899997 9999999988887776  888888777553

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.35  E-value=0.44  Score=38.32  Aligned_cols=32  Identities=22%  Similarity=0.126  Sum_probs=27.5

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARS  114 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~  114 (270)
                      .+|||.|+ ||+|..+++.+...|+ ++.+++.+
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            46999998 9999999999988998 78777753

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.02  E-value=0.36  Score=36.91  Aligned_cols=35  Identities=20%  Similarity=0.167  Sum_probs=30.2

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      ++..+|+|+|| |-.|+.++..+...|.+|.+...+
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            34467999998 999999999999999999998754

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=87.89  E-value=2.7  Score=28.27  Aligned_cols=86  Identities=13%  Similarity=0.079  Sum_probs=53.9

Q ss_pred             EEEEecCCchHHHH-HHHHHHHc-CCEEEEEe-CCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeCCC
Q 042426           83 YVYVSAASGAVGQL-VGQFVKLV-GCYVVGSA-RSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG  159 (270)
Q Consensus        83 ~vlI~ga~g~vG~~-ai~la~~~-g~~v~~~~-~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~~g  159 (270)
                      +|.|+|. |.+|.- .+...+.. ++++++++ +++++.+.+.++++... ++     ++.+.+.     .+|+|+-|+.
T Consensus         3 ri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~~-----~~~~l~~-----~~D~V~I~tp   70 (164)
T d1tlta1           3 RIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-AD-----SLSSLAA-----SCDAVFVHSS   70 (164)
T ss_dssp             EEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-CS-----SHHHHHT-----TCSEEEECSC
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-cc-----cchhhhh-----hccccccccc
Confidence            5889996 899864 56655544 67887766 44555555555787642 21     2333222     3899998887


Q ss_pred             cc-hHHHHHHccccCCEEEEEcc
Q 042426          160 GK-MLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       160 ~~-~~~~~~~~l~~~G~~v~~g~  181 (270)
                      .. ..+.+..++..+-. |.+..
T Consensus        71 ~~~h~~~~~~al~~gk~-V~~EK   92 (164)
T d1tlta1          71 TASHFDVVSTLLNAGVH-VCVDK   92 (164)
T ss_dssp             TTHHHHHHHHHHHTTCE-EEEES
T ss_pred             chhccccccccccccce-eeccc
Confidence            64 66777777777644 44443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=87.66  E-value=0.69  Score=34.58  Aligned_cols=72  Identities=13%  Similarity=0.162  Sum_probs=41.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-EEEEEe--CCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcC-CCccEEEeCCC
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGC-YVVGSA--RSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFP-EGIDIYFENVG  159 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~-~v~~~~--~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~-~~~d~v~d~~g  159 (270)
                      |||+||+|=+|..++..+...|. +|+++.  .+..+..... +.......+..   +....+..... ..++.++-+.+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLNIADYMDKE---DFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-TSCCSEEEEHH---HHHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc-ccchhhhccch---HHHHHHhhhhcccchhhhhhhcc
Confidence            89999999999999888888897 688874  2222333333 33322222221   33333332222 26778877654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=87.56  E-value=0.38  Score=36.94  Aligned_cols=34  Identities=18%  Similarity=0.245  Sum_probs=29.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      ..+|+|+|| |..|+.++..+...|.+|.++..++
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            357999998 9999999999988899999999664

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.55  E-value=0.28  Score=34.25  Aligned_cols=91  Identities=13%  Similarity=0.155  Sum_probs=50.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeC-CH-----HHHHHHHHHh-CC-C-ceeecCCchhHHHHHHhHcCCCcc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV-GCYVVGSAR-SK-----EKVDLLKHKF-GF-D-DAFNYKEEPDLDAALNRCFPEGID  152 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~-~~-----~~~~~~~~~~-g~-~-~vi~~~~~~~~~~~i~~~~~~~~d  152 (270)
                      +|.|.||||-+|+-+++++..+ ..++..+.. +.     ++.......+ +. + ......+.        .....++|
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d   74 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDV--------RDFSADVD   74 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCG--------GGTCTTCC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhh--------hhhhcccc
Confidence            6899999999999999999987 556654432 11     1122111011 11 1 11111111        01112589


Q ss_pred             EEEeCCCcchHHHHHHc-cccCCEEEEEcc
Q 042426          153 IYFENVGGKMLDAVLLN-MRICGHIAVCGM  181 (270)
Q Consensus       153 ~v~d~~g~~~~~~~~~~-l~~~G~~v~~g~  181 (270)
                      ++|-|.+.......... +..+-+++..+.
T Consensus        75 vvf~alp~~~s~~~~~~~~~~~~~vIDlSa  104 (179)
T d2g17a1          75 VVFLATAHEVSHDLAPQFLQAGCVVFDLSG  104 (179)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred             eeeccccchhHHHHhhhhhhcCceeecccc
Confidence            99999998655544444 444556666543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.53  E-value=0.1  Score=36.30  Aligned_cols=95  Identities=13%  Similarity=0.002  Sum_probs=60.1

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC------ceee--cCCchhHHHHHHhHcCCC
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD------DAFN--YKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~------~vi~--~~~~~~~~~~i~~~~~~~  150 (270)
                      -.|.+++|.|-+.-+|.=++.++...|+.|+...... ..++   ..+.+      ..-+  .-..+...+...+     
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~-----   97 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN-IQKF---TRGESLKLNKHHVEDLGEYSEDLLKKCSLD-----   97 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE-EEEE---ESCCCSSCCCCEEEEEEECCHHHHHHHHHH-----
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccc-cccc---ccccceeeeeeccccccccchhHHhhcccc-----
Confidence            3578999999988999988888888899987655321 1111   11211      1111  1111023333333     


Q ss_pred             ccEEEeCCCcchHHHHHHccccCCEEEEEccc
Q 042426          151 IDIYFENVGGKMLDAVLLNMRICGHIAVCGMI  182 (270)
Q Consensus       151 ~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  182 (270)
                      .|+++-++|.+.+.---+.+++|..++.+|..
T Consensus        98 aDIvIsavG~p~~~i~~d~ik~GavvIDvGi~  129 (171)
T d1edza1          98 SDVVITGVPSENYKFPTEYIKEGAVCINFACT  129 (171)
T ss_dssp             CSEEEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             CCEEEEccCCCccccChhhcccCceEeecccc
Confidence            89999999986554445678888899998864

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=87.38  E-value=1.2  Score=35.16  Aligned_cols=52  Identities=17%  Similarity=0.105  Sum_probs=39.0

Q ss_pred             cCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCc
Q 042426           76 CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR---SKEKVDLLKHKFGFDD  129 (270)
Q Consensus        76 ~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~---~~~~~~~~~~~~g~~~  129 (270)
                      .+++++.+ +|-..+|+.|.+++..|+.+|.+++++..   ++.+.+.++ .+|++-
T Consensus       139 ~~~~~g~~-VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ir-a~GAeV  193 (382)
T d1wkva1         139 RRVEKGSL-VADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPR-LLGAQV  193 (382)
T ss_dssp             TTSCTTCE-EEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHH-HTTCEE
T ss_pred             hccCCCCE-EEEeCCcHHHHHHHHHHHHcCCCEEEEeecccccccccccc-ccCcce
Confidence            35677765 45455699999999999999997777664   456777777 888853

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=87.29  E-value=0.43  Score=33.86  Aligned_cols=88  Identities=14%  Similarity=0.067  Sum_probs=56.7

Q ss_pred             CCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEEEeC
Q 042426           78 PKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFEN  157 (270)
Q Consensus        78 ~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v~d~  157 (270)
                      +.++++||=+|+  |.|..+..+     .++++++.+++-.+.++ +.+.. ++..... ++.     ..++.||+|+..
T Consensus        34 ~~~~~~vLDiGc--G~G~~~~~~-----~~~~giD~s~~~~~~a~-~~~~~-~~~~d~~-~l~-----~~~~~fD~I~~~   98 (208)
T d1vlma_          34 LLPEGRGVEIGV--GTGRFAVPL-----KIKIGVEPSERMAEIAR-KRGVF-VLKGTAE-NLP-----LKDESFDFALMV   98 (208)
T ss_dssp             HCCSSCEEEETC--TTSTTHHHH-----TCCEEEESCHHHHHHHH-HTTCE-EEECBTT-BCC-----SCTTCEEEEEEE
T ss_pred             hCCCCeEEEECC--CCccccccc-----ceEEEEeCChhhccccc-ccccc-ccccccc-ccc-----cccccccccccc
Confidence            456678999984  556655554     35688999999999888 54443 2221111 110     112369999875


Q ss_pred             CCc-------chHHHHHHccccCCEEEEEc
Q 042426          158 VGG-------KMLDAVLLNMRICGHIAVCG  180 (270)
Q Consensus       158 ~g~-------~~~~~~~~~l~~~G~~v~~g  180 (270)
                      ..-       ..++...+.|+|+|.++...
T Consensus        99 ~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~  128 (208)
T d1vlma_          99 TTICFVDDPERALKEAYRILKKGGYLIVGI  128 (208)
T ss_dssp             SCGGGSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccchhhhhhcCCCCceEEEEe
Confidence            431       26788999999999988754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=87.29  E-value=0.22  Score=37.34  Aligned_cols=31  Identities=26%  Similarity=0.212  Sum_probs=27.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      +|+|+|| |..|+.++..+...|.+|.++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            4899998 999999999999999999999865

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.22  E-value=2.6  Score=31.98  Aligned_cols=101  Identities=18%  Similarity=0.067  Sum_probs=58.5

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc-eeecCCchhHHHHHHhHc-CC-C
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK---FGFDD-AFNYKEEPDLDAALNRCF-PE-G  150 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-vi~~~~~~~~~~~i~~~~-~~-~  150 (270)
                      ...++.+||=..+  ++|.+.+..++ .|++|+.++.++...+.+++-   .|.+. -+.+-.. |..+.+.+.. .+ .
T Consensus       129 ~~~~~~rVLdlf~--~tG~~sl~aa~-~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~-D~~~~l~~~~~~~~~  204 (309)
T d2igta1         129 TADRPLKVLNLFG--YTGVASLVAAA-AGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICE-DAMKFIQREERRGST  204 (309)
T ss_dssp             HSSSCCEEEEETC--TTCHHHHHHHH-TTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECS-CHHHHHHHHHHHTCC
T ss_pred             hccCCCeEEEecC--CCcHHHHHHHh-CCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeC-CHHHhHHHHhhcCCC
Confidence            4556778887653  34445555443 588999999999988888742   24321 2233223 4444444332 13 6


Q ss_pred             ccEEEe-CC--C-----c---------chHHHHHHccccCCEEEEEcc
Q 042426          151 IDIYFE-NV--G-----G---------KMLDAVLLNMRICGHIAVCGM  181 (270)
Q Consensus       151 ~d~v~d-~~--g-----~---------~~~~~~~~~l~~~G~~v~~g~  181 (270)
                      ||+|+- .-  +     .         ..+..+..+++++|.++.+..
T Consensus       205 fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t~  252 (309)
T d2igta1         205 YDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA  252 (309)
T ss_dssp             BSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred             CCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEec
Confidence            998863 11  1     0         133556778899987665433

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.95  E-value=0.34  Score=34.07  Aligned_cols=31  Identities=3%  Similarity=-0.005  Sum_probs=27.3

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR  113 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~  113 (270)
                      .+|+|.|| |+.|+.++..+...|.+++++.+
T Consensus         6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~   36 (192)
T d1vdca1           6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEG   36 (192)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCCEEECC
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEe
Confidence            47999998 99999999888889999988874

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=86.90  E-value=3.5  Score=28.50  Aligned_cols=102  Identities=21%  Similarity=0.251  Sum_probs=64.3

Q ss_pred             CCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ceeecCCchhHHHHHHhHcCCCccEE
Q 042426           77 SPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFD--DAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        77 ~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      .+++|.. +|-+..|+=|+ ...+++. +.+|+++++.++..+.++ +.-..  ..+..... ++.+.+.....+.+|.|
T Consensus        15 ~~~~g~~-~vD~T~G~GGh-s~~iL~~-~~~viaiD~D~~ai~~a~-~~~~~~~~~~~~~f~-~~~~~l~~~~~~~vdgI   89 (182)
T d1wg8a2          15 AVRPGGV-YVDATLGGAGH-ARGILER-GGRVIGLDQDPEAVARAK-GLHLPGLTVVQGNFR-HLKRHLAALGVERVDGI   89 (182)
T ss_dssp             TCCTTCE-EEETTCTTSHH-HHHHHHT-TCEEEEEESCHHHHHHHH-HTCCTTEEEEESCGG-GHHHHHHHTTCSCEEEE
T ss_pred             CCCCCCE-EEEeCCCCcHH-HHHHhcc-cCcEEEEhhhhhHHHHHh-hccccceeEeehHHH-HHHHHHHHcCCCccCEE
Confidence            4677775 45554455555 4444554 669999999999888887 44332  22333332 56666655544478776


Q ss_pred             EeCCCcc----------------hHHHHHHccccCCEEEEEcccc
Q 042426          155 FENVGGK----------------MLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       155 ~d~~g~~----------------~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +=-.|-.                .+..+.+.++++|+++.+..++
T Consensus        90 l~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fhs  134 (182)
T d1wg8a2          90 LADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFHS  134 (182)
T ss_dssp             EEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECSH
T ss_pred             EEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEeccc
Confidence            5433421                3677888999999998876643

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.82  E-value=0.41  Score=34.18  Aligned_cols=30  Identities=20%  Similarity=0.159  Sum_probs=26.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      ++|+|+ |+.|+.++..+...|.+|.++.+.
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence            678897 999999999999999999999754

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=86.81  E-value=0.34  Score=34.78  Aligned_cols=31  Identities=13%  Similarity=0.075  Sum_probs=27.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      .++|+|+ |+.|+.++..+..+|.+|.++.+.
T Consensus         7 DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            3788897 999999999999999999999754

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=86.72  E-value=0.37  Score=34.42  Aligned_cols=30  Identities=10%  Similarity=-0.061  Sum_probs=27.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      ++|+|+ |+.|+.++..+..+|.+|.++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            789998 999999999999999999999864

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.59  E-value=1.3  Score=28.72  Aligned_cols=60  Identities=13%  Similarity=0.174  Sum_probs=46.2

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYK  134 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~  134 (270)
                      ..+++..-+.+++.-..-..-+++.+.++.+|. ++++.+.+++..+.++ ++|++.++++.
T Consensus        59 ~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~-~~G~d~vi~p~  119 (132)
T d1lssa_          59 EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFE-RLGVDVVVSPE  119 (132)
T ss_dssp             HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHH-HTTCSEEECHH
T ss_pred             hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHH-HCCCCEEECHH
Confidence            456677777776654445566788888999988 7888888888888888 99999888654

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=86.11  E-value=1  Score=31.02  Aligned_cols=99  Identities=11%  Similarity=0.065  Sum_probs=57.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeC---CHHHHHHHHHHhCCC-----ceeecCCc------hh----HHHHH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV-GCYVVGSAR---SKEKVDLLKHKFGFD-----DAFNYKEE------PD----LDAAL  143 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~---~~~~~~~~~~~~g~~-----~vi~~~~~------~~----~~~~i  143 (270)
                      +|.|.|- |-+|..+...+... ..+++++-.   +.+....+- ++-..     .-+...+.      ..    -....
T Consensus         3 kIgINGF-GRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p   80 (169)
T d1u8fo1           3 KVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMF-QYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP   80 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHH-hhccccCCcCCeEEEECCEEEECCEEEEEEECCCh
Confidence            6899997 99999998877544 568887754   334555554 32110     00000000      00    00012


Q ss_pred             HhHcCC--CccEEEeCCCc-chHHHHHHccccCCEEEEEcccc
Q 042426          144 NRCFPE--GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       144 ~~~~~~--~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      .+...+  ++|+|+||+|. ...+.+...+..+.+-|.+..+.
T Consensus        81 ~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~  123 (169)
T d1u8fo1          81 SKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS  123 (169)
T ss_dssp             GGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred             hhCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence            222222  79999999997 46667777888887666665543

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=86.09  E-value=0.42  Score=34.56  Aligned_cols=31  Identities=23%  Similarity=0.019  Sum_probs=27.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      -|+|+|+ |+.|+.++..+...|.+|.++.+.
T Consensus         8 DviIIG~-GPaGlsaA~~aa~~G~~V~viE~~   38 (229)
T d1ojta1           8 DVVVLGG-GPGGYSAAFAAADEGLKVAIVERY   38 (229)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCeEEEEecc
Confidence            3788897 999999999999999999999754

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=86.04  E-value=0.37  Score=36.74  Aligned_cols=32  Identities=22%  Similarity=0.076  Sum_probs=28.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .|+|+|| |..|++++..++..|.++.+..+.+
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            5899998 9999999999999999999998654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.93  E-value=0.88  Score=32.22  Aligned_cols=39  Identities=26%  Similarity=0.391  Sum_probs=34.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK  122 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~  122 (270)
                      +|.|+|. |-+|+..+.++...|.+|++.+.++++.+.+.
T Consensus         2 kI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           2 RISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            5889987 99999988888888999999999988888776

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=85.87  E-value=0.76  Score=29.26  Aligned_cols=34  Identities=12%  Similarity=0.040  Sum_probs=26.9

Q ss_pred             CcEEEEecCCchHHHHHHHHHHHc---CCEEEEEeCCH
Q 042426           81 GEYVYVSAASGAVGQLVGQFVKLV---GCYVVGSARSK  115 (270)
Q Consensus        81 g~~vlI~ga~g~vG~~ai~la~~~---g~~v~~~~~~~  115 (270)
                      ..+++|.|| |.+|.-+++.+..+   |.+|.++.+++
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            478999998 99999887765544   77999998653

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.76  E-value=1.7  Score=33.24  Aligned_cols=91  Identities=10%  Similarity=0.060  Sum_probs=60.4

Q ss_pred             CCCcEEEEecCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHh---CCCceeecCCchhHHHHHHhHcCCCccE
Q 042426           79 KKGEYVYVSAASGAVGQLVGQFVK-LVGC-YVVGSARSKEKVDLLKHKF---GFDDAFNYKEEPDLDAALNRCFPEGIDI  153 (270)
Q Consensus        79 ~~g~~vlI~ga~g~vG~~ai~la~-~~g~-~v~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~~~~d~  153 (270)
                      +...++.|+|+ |..+.+.++.+. .+.. +|.+..+++++.+...+++   +.....      +..+.+.     +.|+
T Consensus       123 ~~~~~l~iiGa-G~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~------~~~~a~~-----~aDi  190 (320)
T d1omoa_         123 KNSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASV------QPAEEAS-----RCDV  190 (320)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEE------CCHHHHT-----SSSE
T ss_pred             CCccEEEEecC-cccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCcccc------chhhhhc-----cccE
Confidence            34468999986 999987777665 4566 8999999988776554333   222111      1222332     3899


Q ss_pred             EEeCCCc--chHHHHHHccccCCEEEEEcccc
Q 042426          154 YFENVGG--KMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       154 v~d~~g~--~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      |+-|+.+  +.+..  +.++++-++..+|...
T Consensus       191 V~taT~s~~P~~~~--~~l~~G~hv~~iGs~~  220 (320)
T d1omoa_         191 LVTTTPSRKPVVKA--EWVEEGTHINAIGADG  220 (320)
T ss_dssp             EEECCCCSSCCBCG--GGCCTTCEEEECSCCS
T ss_pred             EEEeccCcccccch--hhcCCCCeEeecCCcc
Confidence            9998876  34432  4689999999998744

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.62  E-value=2.5  Score=28.45  Aligned_cols=45  Identities=16%  Similarity=0.262  Sum_probs=36.6

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG  126 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~~~~g  126 (270)
                      +|.++.|++.+||.|.+++..+...|.++-  .-+++..+.+++.+.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~--~l~~~t~~~L~~~lp   46 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA--TLEEKTIEELRSFLP   46 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC--CCCHHHHHHHHHHSC
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC--CCCHHHHHHHHHhCC
Confidence            588999999999999999999999997764  446777788874444

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=85.47  E-value=3.9  Score=27.87  Aligned_cols=74  Identities=18%  Similarity=0.172  Sum_probs=43.9

Q ss_pred             CCcEEEEecCCchHHHHH---HHHHH--Hc-CCEEEEEeCCHHHHHHHH-------HHhCCCceeecCCchhHHHHHHhH
Q 042426           80 KGEYVYVSAASGAVGQLV---GQFVK--LV-GCYVVGSARSKEKVDLLK-------HKFGFDDAFNYKEEPDLDAALNRC  146 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~a---i~la~--~~-g~~v~~~~~~~~~~~~~~-------~~~g~~~vi~~~~~~~~~~~i~~~  146 (270)
                      |+-+|.|+|| |++|...   ..+++  .+ +.+++..+.++++.+...       +.++...-+....  +..+.+.  
T Consensus         1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~t--d~~eaL~--   75 (171)
T d1obba1           1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTM--NLDDVII--   75 (171)
T ss_dssp             CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEES--CHHHHHT--
T ss_pred             CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeC--Chhhccc--
Confidence            4558999998 9888542   22332  22 349999998887655322       1344432232222  4555553  


Q ss_pred             cCCCccEEEeCCCcc
Q 042426          147 FPEGIDIYFENVGGK  161 (270)
Q Consensus       147 ~~~~~d~v~d~~g~~  161 (270)
                         +.|+|+.+++..
T Consensus        76 ---dad~Vv~~~~~g   87 (171)
T d1obba1          76 ---DADFVINTAMVG   87 (171)
T ss_dssp             ---TCSEEEECCCTT
T ss_pred             ---CCCeEeeecccc
Confidence               489999998753

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.25  E-value=0.43  Score=34.37  Aligned_cols=31  Identities=13%  Similarity=0.161  Sum_probs=27.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      .|+|+|+ |+.|+.++..+..+|.+|.++...
T Consensus         7 DviVIG~-GpAGl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           7 DVVIIGG-GPAGYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            3788997 999999988888899999999854

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=85.21  E-value=0.65  Score=31.88  Aligned_cols=99  Identities=15%  Similarity=0.128  Sum_probs=55.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCC--HHHHHHHHHHh----CC-CceeecCCch------h----HHHHHH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV-GCYVVGSARS--KEKVDLLKHKF----GF-DDAFNYKEEP------D----LDAALN  144 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~--~~~~~~~~~~~----g~-~~vi~~~~~~------~----~~~~i~  144 (270)
                      +|.|.|- |-+|..+...+... ..+++++-..  .+.+..+- ++    |. +.-+...+..      .    ......
T Consensus         3 kigINGF-GRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl-~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~   80 (166)
T d1gado1           3 KVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYML-KYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPA   80 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEECC-cHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhh-eecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChH
Confidence            5889997 99999999887655 3588777743  23333333 22    11 0001000000      0    000111


Q ss_pred             hHcCC--CccEEEeCCCc-chHHHHHHccccCCEEEEEcccc
Q 042426          145 RCFPE--GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       145 ~~~~~--~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      +...+  ++|+|+||+|. ...+.+..++..+.+-|.+..+.
T Consensus        81 ~i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~  122 (166)
T d1gado1          81 NLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS  122 (166)
T ss_dssp             GGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             HCCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence            11112  69999999997 46667778888887666665544

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=85.17  E-value=0.44  Score=35.33  Aligned_cols=32  Identities=9%  Similarity=0.077  Sum_probs=28.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .|+|+|| |.+|++++..+...|.+|+++.+.+
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4899998 9999999988888899999999653

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=84.94  E-value=0.36  Score=37.18  Aligned_cols=31  Identities=16%  Similarity=0.157  Sum_probs=25.4

Q ss_pred             EEEEecCCchHHHHHHHHHH-----HcCCEEEEEeCC
Q 042426           83 YVYVSAASGAVGQLVGQFVK-----LVGCYVVGSARS  114 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~-----~~g~~v~~~~~~  114 (270)
                      -|+|.|| |.+|++++..+.     ..|.+|.++.+.
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~   44 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKR   44 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCC
Confidence            4899998 999998887763     568999998864

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.78  E-value=0.47  Score=34.20  Aligned_cols=31  Identities=16%  Similarity=0.231  Sum_probs=27.5

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      |+|+|+ |-.|+.++..+...|.+|.++.+++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788897 9999999998888899999999754

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.73  E-value=0.6  Score=33.28  Aligned_cols=30  Identities=13%  Similarity=0.080  Sum_probs=26.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      ++|+|+ |+.|+.++..+..+|.+|.++...
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            678897 999999999999999999999753

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.61  E-value=3.9  Score=26.93  Aligned_cols=34  Identities=15%  Similarity=-0.049  Sum_probs=27.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEK  117 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~~~  117 (270)
                      +|.|+|+ |.+|..++..+...+.  +++..+..+++
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~   37 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDL   37 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccch
Confidence            5789997 9999998888877775  78888877655

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.28  E-value=0.44  Score=36.18  Aligned_cols=32  Identities=13%  Similarity=0.145  Sum_probs=28.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK  115 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~  115 (270)
                      .|+|+|| |..|+.++..+...|.+|.++..++
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            4899998 9999999999988899999998654

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=83.97  E-value=0.52  Score=35.67  Aligned_cols=31  Identities=19%  Similarity=0.130  Sum_probs=27.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      -|+|+|+ |..|++++..+...|++|+++...
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            3899997 999999999999999999999854

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=83.81  E-value=3.1  Score=27.78  Aligned_cols=24  Identities=21%  Similarity=0.109  Sum_probs=20.2

Q ss_pred             cEEEEecCCchHHHHHHHHHHHcC
Q 042426           82 EYVYVSAASGAVGQLVGQFVKLVG  105 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~~g  105 (270)
                      -+|.|+||+|.+|+.++..+...+
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcc
Confidence            479999999999999888777543

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=83.80  E-value=4.3  Score=29.19  Aligned_cols=93  Identities=10%  Similarity=-0.017  Sum_probs=56.2

Q ss_pred             cEEEEecCCch----HHHHHHHHHHHc--CCEEEEEe-CCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCCccEE
Q 042426           82 EYVYVSAASGA----VGQLVGQFVKLV--GCYVVGSA-RSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIY  154 (270)
Q Consensus        82 ~~vlI~ga~g~----vG~~ai~la~~~--g~~v~~~~-~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~~d~v  154 (270)
                      =+|.|+|. |+    ++...+...+.+  ++++++++ ++.++.+...++++....-.+.   ++.+.+.+   ..+|+|
T Consensus        17 irvgiIG~-G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~---~~iD~V   89 (237)
T d2nvwa1          17 IRVGFVGL-TSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFD---SLESFAQY---KDIDMI   89 (237)
T ss_dssp             EEEEEECC-CSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEES---CHHHHHHC---TTCSEE
T ss_pred             eEEEEEec-CccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeec---chhhcccc---ccccee
Confidence            37899997 44    344444444433  56888665 5566666655588775443343   44444432   259999


Q ss_pred             EeCCCcc-hHHHHHHccccC-----CEEEEEcc
Q 042426          155 FENVGGK-MLDAVLLNMRIC-----GHIAVCGM  181 (270)
Q Consensus       155 ~d~~g~~-~~~~~~~~l~~~-----G~~v~~g~  181 (270)
                      +-|+... ..+.+..+|..+     +.=|.+..
T Consensus        90 ~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EK  122 (237)
T d2nvwa1          90 VVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEW  122 (237)
T ss_dssp             EECSCHHHHHHHHHHHHHHSSSCSSCCEEEEES
T ss_pred             eccCCCcchhhHHHHHHHhcccccCCceEEEec
Confidence            9999864 666667776654     44566654

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=83.57  E-value=4.2  Score=28.46  Aligned_cols=73  Identities=16%  Similarity=0.143  Sum_probs=44.6

Q ss_pred             hhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecCCchhHHHHHHhHcCCC
Q 042426           72 LHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEG  150 (270)
Q Consensus        72 l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~~~  150 (270)
                      +.....+ .|.+||=.|+  |.|..++.+ ..+|+ +|+++..+++..+.+++-.....++..    ++    .+ .++.
T Consensus        41 ~~~~~dl-~Gk~VLDlGc--GtG~l~i~a-~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~----D~----~~-l~~~  107 (197)
T d1ne2a_          41 IYNDGNI-GGRSVIDAGT--GNGILACGS-YLLGAESVTAFDIDPDAIETAKRNCGGVNFMVA----DV----SE-ISGK  107 (197)
T ss_dssp             HHHHTSS-BTSEEEEETC--TTCHHHHHH-HHTTBSEEEEEESCHHHHHHHHHHCTTSEEEEC----CG----GG-CCCC
T ss_pred             HHHcCCC-CCCEEEEeCC--CCcHHHHHH-HHcCCCcccccccCHHHHHHHHHccccccEEEE----eh----hh-cCCc
Confidence            4345565 4789999884  446555544 44565 899999999988888833322222221    22    11 2347


Q ss_pred             ccEEEeC
Q 042426          151 IDIYFEN  157 (270)
Q Consensus       151 ~d~v~d~  157 (270)
                      ||+|+..
T Consensus       108 fD~Vi~N  114 (197)
T d1ne2a_         108 YDTWIMN  114 (197)
T ss_dssp             EEEEEEC
T ss_pred             ceEEEeC
Confidence            9998854

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=83.41  E-value=0.57  Score=33.44  Aligned_cols=29  Identities=21%  Similarity=0.132  Sum_probs=26.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSAR  113 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~  113 (270)
                      ++|+|+ |+-|+.++..+...|.+|.++..
T Consensus         6 viIIGg-GpAGl~aA~~aar~G~~V~viE~   34 (229)
T d3lada1           6 VIVIGA-GPGGYVAAIKSAQLGLKTALIEK   34 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEec
Confidence            788897 99999999999999999999974

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.99  E-value=0.61  Score=35.64  Aligned_cols=30  Identities=23%  Similarity=0.232  Sum_probs=27.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      |+|+|| |..|+.++..++..|.+|+++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            789998 999999999999999999999854

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=82.77  E-value=0.62  Score=34.61  Aligned_cols=30  Identities=23%  Similarity=0.214  Sum_probs=26.9

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        84 vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      |+|+|| |-+|++++..+...|.+|+++.+.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            889998 999999999888899999999864

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.55  E-value=0.76  Score=33.03  Aligned_cols=34  Identities=15%  Similarity=0.055  Sum_probs=26.9

Q ss_pred             cEEEEecCCchHHHHHHHHHHH--cCCEEEEEeCCHH
Q 042426           82 EYVYVSAASGAVGQLVGQFVKL--VGCYVVGSARSKE  116 (270)
Q Consensus        82 ~~vlI~ga~g~vG~~ai~la~~--~g~~v~~~~~~~~  116 (270)
                      .+|+|+|| |+.|+.+++.++.  .|.+|+++.+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            37999998 9999999886644  4779999986643

>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.47  E-value=1.4  Score=30.61  Aligned_cols=37  Identities=16%  Similarity=0.161  Sum_probs=30.8

Q ss_pred             cCCCCCcEEEEec---CCchHHHHHHHHHHHcCCEEEEEe
Q 042426           76 CSPKKGEYVYVSA---ASGAVGQLVGQFVKLVGCYVVGSA  112 (270)
Q Consensus        76 ~~~~~g~~vlI~g---a~g~vG~~ai~la~~~g~~v~~~~  112 (270)
                      ..+.+|++|+|..   +||+.-.+++++++..|++|+.+.
T Consensus       113 ~~i~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvg~~  152 (178)
T d1zn7a1         113 DALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECV  152 (178)
T ss_dssp             TSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CcccCCCeEEEehhhhhhchHHHHHHHHHHHCCCEEEEEE
Confidence            3477899999985   689999999999999999865543

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=82.44  E-value=3.7  Score=27.89  Aligned_cols=92  Identities=14%  Similarity=0.076  Sum_probs=56.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeC---CHHHHHHHHHHhCCC----------------------ceeecCCc
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV-GCYVVGSAR---SKEKVDLLKHKFGFD----------------------DAFNYKEE  136 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~---~~~~~~~~~~~~g~~----------------------~vi~~~~~  136 (270)
                      +|.|.|- |-+|.++...+... ..+|+++-.   +.+....+- ++-..                      .++..+++
T Consensus         2 kigINGf-GRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p   79 (166)
T d2b4ro1           2 KLGINGF-GRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLL-KYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDP   79 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSG
T ss_pred             eEEEECC-CHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhh-hcccccccceeeeccCCceEEecCcEEEEEeCCCh
Confidence            6889998 99999998877644 468887763   344555554 32110                      00111111


Q ss_pred             hhHHHHHHhHcCC--CccEEEeCCCc-chHHHHHHccccCCEEEEEcccc
Q 042426          137 PDLDAALNRCFPE--GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       137 ~~~~~~i~~~~~~--~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                             .+...+  ++|+|+||+|. ...+.+...+..+..-|.+..+.
T Consensus        80 -------~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  122 (166)
T d2b4ro1          80 -------SQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP  122 (166)
T ss_dssp             -------GGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             -------HHccccccCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence                   111111  69999999997 45667778888886666665543

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=82.27  E-value=5.2  Score=30.06  Aligned_cols=53  Identities=21%  Similarity=0.221  Sum_probs=37.6

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR---SKEKVDLLKHKFGFD  128 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~---~~~~~~~~~~~~g~~  128 (270)
                      +.+.+.++..|+.. .+|+-|++++..|+.+|++++++..   ++.+.+.++ .+|+.
T Consensus        54 ~~g~~~~~~~vv~~-SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~  109 (310)
T d1y7la1          54 KDGTLTKGKEIVDA-TSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLC-GLGVN  109 (310)
T ss_dssp             HTTSSCTTCEEEES-CCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCE
T ss_pred             HcCCCCCCceeeee-cCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHH-HhCCc
Confidence            34556777665554 4699999999999999996555553   344666666 77775

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=82.21  E-value=4.4  Score=28.49  Aligned_cols=101  Identities=17%  Similarity=0.189  Sum_probs=64.1

Q ss_pred             HHHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCce--eecCCchhHHH
Q 042426           68 AYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLV-GCYVVGSARSKEKVDLLKH---KFGFDDA--FNYKEEPDLDA  141 (270)
Q Consensus        68 a~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~v--i~~~~~~~~~~  141 (270)
                      -|..++.  +  ....+|=+|  +|.|..++.+|+.. ...++++..++.....+.+   +.+..++  +..... ++  
T Consensus        23 ~w~~~f~--~--~~plvLdIG--cG~G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~-~l--   93 (204)
T d1yzha1          23 KWRDLFG--N--DNPIHVEVG--SGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGS-DL--   93 (204)
T ss_dssp             THHHHHT--S--CCCEEEEES--CTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSS-CG--
T ss_pred             cHHHHcC--C--CCCeEEEEe--ccCCHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHH-HH--
Confidence            3555543  2  234667776  88999999999987 5699999999876655532   4566533  222111 22  


Q ss_pred             HHHhHcC-CCccEEEeCCCc---------------chHHHHHHccccCCEEEEE
Q 042426          142 ALNRCFP-EGIDIYFENVGG---------------KMLDAVLLNMRICGHIAVC  179 (270)
Q Consensus       142 ~i~~~~~-~~~d~v~d~~g~---------------~~~~~~~~~l~~~G~~v~~  179 (270)
                        .+..+ +.+|.|+-....               ..++...+.|+|||.+...
T Consensus        94 --~~~~~~~~~~~i~i~fPdPw~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~  145 (204)
T d1yzha1          94 --TDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  145 (204)
T ss_dssp             --GGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             --hhhccCCceehhcccccccccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEE
Confidence              22222 357777554332               3577888999999998764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=82.03  E-value=0.53  Score=36.35  Aligned_cols=30  Identities=17%  Similarity=0.100  Sum_probs=24.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCE--EEEEe
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCY--VVGSA  112 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~--v~~~~  112 (270)
                      +|||+||+|=+|..++..+...|.+  |++..
T Consensus         4 kILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d   35 (346)
T d1oc2a_           4 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLD   35 (346)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEe
Confidence            6999999999999998888777764  55544

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=82.01  E-value=1.8  Score=28.81  Aligned_cols=33  Identities=24%  Similarity=0.193  Sum_probs=27.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSK  115 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~--~v~~~~~~~  115 (270)
                      +|.|.||+|.+|..++.++...+.  ++..++..+
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            588999889999999999988885  888887553

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.84  E-value=0.62  Score=33.62  Aligned_cols=30  Identities=10%  Similarity=-0.042  Sum_probs=26.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSAR  113 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~  113 (270)
                      -|+|+|+ |+.|+.++..+..+|.+|.++..
T Consensus         5 DviVIG~-GpaGl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           5 DLIIIGG-GSGGLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGCCCEEEECC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCeEEEEec
Confidence            3788997 99999999999999999999973

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=81.56  E-value=1.1  Score=28.44  Aligned_cols=34  Identities=12%  Similarity=-0.000  Sum_probs=26.8

Q ss_pred             CCcEEEEecCCchHHHHHHHHHHHcC---CEEEEEeCC
Q 042426           80 KGEYVYVSAASGAVGQLVGQFVKLVG---CYVVGSARS  114 (270)
Q Consensus        80 ~g~~vlI~ga~g~vG~~ai~la~~~g---~~v~~~~~~  114 (270)
                      .+++++|.|| |.+|+-++..++.++   .+|+++.++
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~   55 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRG   55 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEecc
Confidence            3578999998 999998887776665   478888864

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=81.44  E-value=8.4  Score=28.55  Aligned_cols=53  Identities=21%  Similarity=0.199  Sum_probs=37.0

Q ss_pred             hhcCCCCCcEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCC
Q 042426           74 ELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR---SKEKVDLLKHKFGFD  128 (270)
Q Consensus        74 ~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~---~~~~~~~~~~~~g~~  128 (270)
                      +.+.++++..+.. ..+|+-|.+++..++.+|.+++++..   ++.+.+.++ .+|+.
T Consensus        54 ~~g~~~~~~~vv~-assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~-~~ga~  109 (302)
T d1fcja_          54 KRGVLKPGVELVE-PTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLK-ALGAN  109 (302)
T ss_dssp             HHTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCE
T ss_pred             HcCCCCCCceEEE-eccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHH-Hhccc
Confidence            3456677776555 45699999999999999986555553   445666666 77764

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.36  E-value=0.67  Score=35.35  Aligned_cols=31  Identities=26%  Similarity=0.260  Sum_probs=27.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARS  114 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~  114 (270)
                      .|+|+|+ |..|++++.-+...|++|+++...
T Consensus        21 DVvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          21 QVLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            4899997 999999999888889999999854

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.97  E-value=2.8  Score=30.04  Aligned_cols=45  Identities=24%  Similarity=0.234  Sum_probs=33.5

Q ss_pred             HHHhhhhcCCCCCcEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 042426           69 YGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARS  114 (270)
Q Consensus        69 ~~~l~~~~~~~~g~~vlI~ga~g~vG~~ai~la~~~g~-~v~~~~~~  114 (270)
                      ..++.....--..++|+++|| |+.|...+++....+. +++.+++.
T Consensus        14 l~a~~~~g~~l~d~riv~~GA-GsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          14 LNALKLTEKKIEEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             HHHHHHHTCCTTTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             HHHHHHhCCChhhcEEEEECh-HHHHHHHHHHHHHhcccceEeecce
Confidence            344544444445689999998 9999988888888787 88888753

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.74  E-value=0.94  Score=31.14  Aligned_cols=99  Identities=16%  Similarity=0.218  Sum_probs=55.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc---CCEEEEEeC--CHHHHHHHHHHh----CC-CceeecCCch------h----HHHH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLV---GCYVVGSAR--SKEKVDLLKHKF----GF-DDAFNYKEEP------D----LDAA  142 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~---g~~v~~~~~--~~~~~~~~~~~~----g~-~~vi~~~~~~------~----~~~~  142 (270)
                      +|.|.|- |-+|..+...+...   +.+|+.+-.  +.+....+- ++    |. ..-+...+..      .    ....
T Consensus         2 kIgINGf-GRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLl-kyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           2 RVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLL-KYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHH-HCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             EEEEECC-ChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHH-hccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            6899997 99999998876532   368887753  334444443 22    11 0001110000      0    0001


Q ss_pred             HHhHcCC--CccEEEeCCCc-chHHHHHHccccCCEEEEEcccc
Q 042426          143 LNRCFPE--GIDIYFENVGG-KMLDAVLLNMRICGHIAVCGMIS  183 (270)
Q Consensus       143 i~~~~~~--~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  183 (270)
                      ..+...+  ++|+|+||+|. ...+.+...+..+.+-|.+..+.
T Consensus        80 p~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~  123 (169)
T d1hdgo1          80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA  123 (169)
T ss_dssp             GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             hhhCCccccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence            1111111  69999999997 46677777888876556665543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=80.65  E-value=1.9  Score=30.08  Aligned_cols=38  Identities=24%  Similarity=0.230  Sum_probs=32.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 042426           83 YVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK  122 (270)
Q Consensus        83 ~vlI~ga~g~vG~~ai~la~~~g~~v~~~~~~~~~~~~~~  122 (270)
                      +|.|.|. |=+|+..+.++ ..|.+|++.+.++++.+.++
T Consensus         2 kI~ViGl-G~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           2 KIAVAGS-GYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             EEEEECC-SHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             EEEEECC-ChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            5888986 99999877666 46999999999999888876