Citrus Sinensis ID: 042567

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-
MGHLWVIPAGPPLGSALVEKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLGKVWGSLLSLIWFKTSTRNDLLFGCFLNIKGIIELLVFLRWIIYKPIDVQTFSTLVLFNLVLTAIVTPLISIFYKPRKRLDRISKIDNCIRTLQSTLPNSELRILCCIHHEDNVNGIINLLRASNPTEMNPICAYAVHLIDLVGRALPVIVPYNTQKRRLVANSTDRIMRAMTRYSKGSGAAVKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHENGEFQSRTACVQNFNKNVLSYAPCTVGIFVDRGLTYYHPSNICYNVAVFFLGGPDDREAMALVSRISSHPGMSITIFRIDLLENSVESENDRCLDDAVTKEFMVGNVGNTRVECHEMVANDSKQLMDAIKKEKDFELVIVDFAEGHMMSLLVIQSVESIKQGAKLLPP
cccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHccccccccEEEEEEEEEEccccccccccccHHHHccccccHHHHHHHHHHHHHcccccEEEEEEEEEcccccHHHHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHccccEEEEEccccccccccccEEEEEEEEcccccHHHHHHHHHHHHccccEEEEEEEEEccccccccccccccHHHHHHHHHccccccccEEEEEEEEccHHHHHHHHHHcccccEEEEEcccccccHHHHHccccccccccccccc
cccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEcccccccEEEEEEEccccccHHHHHHHHHccccccccEEEEEEEEEEcccccccEEEEccccccccccccHHHHHHHHHHHHHHccccEEEEEEEEEcccHHHHHHHHHHHHHccEEEEEEEcccccccccccHHHHHHHHHHHHccccEEEEEEEccccccccccccEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEccccccccHHHHHHcHHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHcccccEEEEEccccccccHHHHcHHHcHHHHHHHccc
mghlwvipagpplgsalveKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLGKVWGSLLSLIWFktstrndllfgCFLNIKGIIELLVFLRWIIykpidvqtfSTLVLFNLVLTAIVTPlisifykprkrldriSKIDNCIRTLqstlpnselRILCCIHHEDNVNGIINLLrasnptemnpiCAYAVHLIDLVgralpvivpyntqkrrlVANSTDRIMRAMTRyskgsgaavkvqpfkmispyntMHQSICKLvednliplvllpfhengefqsRTACVQNFNknvlsyapctvgifvdrgltyyhpsnicyNVAVFFLGGPDDREAMALVSRisshpgmsitIFRIDLLensvesendrclddaVTKEFMVGNVGNTRVECHEMVANDSKQLMDAIKKEKDFELVIVDFAEGHMMSLLVIQSVESIKQGAKLLPP
mghlwvipagpplgsALVEKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLGKVWGSLLSLIWFKTSTRNDLLFGCFLNIKGIIELLVFLRWIIYKPIDVQTFSTLVLFNLVLTAIVTplisifykprkrldriSKIDNCIRTlqstlpnseLRILCCIHHEDNVNGIINLLRASNPTEMNPICAYAVHLIDLVGRALPVivpyntqkrrlvansTDRIMRAMtryskgsgaavkvqpfKMISPYNTMHQSICKLVEDNLIPLVLLPFHENGEFQSRTACVQNFNKNVLSYAPCTVGIFVDRGLTYYHPSNICYNVAVFFLGGPDDREAMALVSRisshpgmsITIFRIDLLENSVESENDRCLDDAVTKEFMVGNVGNTRVECHEMVANDSKQLMDAIKKEKDFELVIVDFAEGHMMSLLVIQSVESIKQGAKLLPP
MGHLWVIPAGPPLGSALVEKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLGKVWGSLLSLIWFKTSTRNDLLFGCFLNIKGIIELLVFLRWIIYKPIDVQTFSTLVLFNLVLTAIVTPLISIFYKPRKRLDRISKIDNCIRTLQSTLPNSELRILCCIHHEDNVNGIINLLRASNPTEMNPICAYAVHLIDLVGRALPVIVPYNTQKRRLVANSTDRIMRAMTRYSKGSGAAVKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHENGEFQSRTACVQNFNKNVLSYAPCTVGIFVDRGLTYYHPSNICYNVAVFFLGGPDDREAMALVSRISSHPGMSITIFRIDLLENSVESENDRCLDDAVTKEFMVGNVGNTRVECHEMVANDSKQLMDAIKKEKDFELVIVDFAEGHMMSLLVIQSVESIKQGAKLLPP
***LWVIPAGPPLGSALVEKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLGKVWGSLLSLIWFKTSTRNDLLFGCFLNIKGIIELLVFLRWIIYKPIDVQTFSTLVLFNLVLTAIVTPLISIFYKPRKRLDRISKIDNCIRTLQSTLPNSELRILCCIHHEDNVNGIINLLRASNPTEMNPICAYAVHLIDLVGRALPVIVPYNTQKRRLVANSTDRIMRAMTRYSKGSGAAVKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHENGEFQSRTACVQNFNKNVLSYAPCTVGIFVDRGLTYYHPSNICYNVAVFFLGGPDDREAMALVSRISSHPGMSITIFRIDLLENSVESENDRCLDDAVTKEFMVGNVGNTRVECHEMVANDSKQLMDAIKKEKDFELVIVDFAEGHMMSLLVIQSVE***********
MGHLWVIPAGPPLGSALVEKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLGKVWGSLLSLIWFKTSTRNDLLFGCFLNIKGIIELLVFLRWIIYKPIDVQTFSTLVLFNLVLTAIVTPLISIFYKPRKR*************************LCCIHHEDNVNGIINLLRA*********CAYAVHLIDLVGR************************RAMTRYSKGSGAAVKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHENGEFQSRTACVQNFNKNVLSYAPCTVGIFVDRGLTY**PSNICYNVAVFFLGGPDDREAMALVSRISSHPGMSITIFRIDLLENSV***NDRCLDDAVTKEFMVGNVGNTRVECHEMVANDSKQLMDAIKKEKDFELVIVDFAE***********VESIKQGAKLLP*
MGHLWVIPAGPPLGSALVEKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLGKVWGSLLSLIWFKTSTRNDLLFGCFLNIKGIIELLVFLRWIIYKPIDVQTFSTLVLFNLVLTAIVTPLISIFYKPRKRLDRISKIDNCIRTLQSTLPNSELRILCCIHHEDNVNGIINLLRASNPTEMNPICAYAVHLIDLVGRALPVIVPYNTQKRRLVANSTDRIMRAMTRYSKGSGAAVKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHENGEFQSRTACVQNFNKNVLSYAPCTVGIFVDRGLTYYHPSNICYNVAVFFLGGPDDREAMALVSRISSHPGMSITIFRIDLLENSVESENDRCLDDAVTKEFMVGNVGNTRVECHEMVANDSKQLMDAIKKEKDFELVIVDFAEGHMMSLLVIQSVESIKQGAKLLPP
MGHLWVIPAGPPLGSALVEKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLGKVWGSLLSLIWFKTSTRNDLLFGCFLNIKGIIELLVFLRWIIYKPIDVQTFSTLVLFNLVLTAIVTPLISIFYKPRKRLDRISKIDNCIRTLQSTLPNSELRILCCIHHEDNVNGIINLLRASNPTEMNPICAYAVHLIDLVGRALPVIVPYNTQKRRLVANSTDRIMRAMTRYSKGSGAAVKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHENGEFQSRTACVQNFNKNVLSYAPCTVGIFVDRGLTYYHPSNICYNVAVFFLGGPDDREAMALVSRISSHPGMSITIFRIDLLENSVESENDRCLDDAVTKEFMVGNVGNTRVECHEMVANDSKQLMDAIKKEKDFELVIVDFAEGHMMSLLVIQSVESIKQGAKLLPP
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGHLWVIPAGPPLGSALVEKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLGKVWGSLLSLIWFKTSTRNDLLFGCFLNIKGIIELLVFLRWIIYKPIDVQTFSTLVLFNLVLTAIVTPLISIFYKPRKRLDRISKIDNCIRTLQSTLPNSELRILCCIHHEDNVNGIINLLRASNPTEMNPICAYAVHLIDLVGRALPVIVPYNTQKRRLVANSTDRIMRAMTRYSKGSGAAVKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHENGEFQSRTACVQNFNKNVLSYAPCTVGIFVDRGLTYYHPSNICYNVAVFFLGGPDDREAMALVSRISSHPGMSITIFRIDLLENSVESENDRCLDDAVTKEFMVGNVGNTRVECHEMVANDSKQLMDAIKKEKDFELVIVDFAEGHMMSLLVIQSVESIKQGAKLLPP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query451 2.2.26 [Sep-21-2011]
Q9SIT5821 Cation/H(+) antiporter 15 yes no 0.822 0.451 0.387 2e-73
Q9FFR9810 Cation/H(+) antiporter 18 no no 0.780 0.434 0.339 2e-54
Q9FGH6857 Cation/H(+) antiporter 25 no no 0.937 0.493 0.284 3e-54
Q1HDT2859 Cation/H(+) antiporter 24 no no 0.937 0.492 0.290 1e-53
Q9FFB8822 Cation/H(+) antiporter 3 no no 0.915 0.502 0.296 2e-52
Q8VYD4867 Cation/H(+) antiporter 23 no no 0.898 0.467 0.285 5e-51
Q9SKA9832 Cation/H(+) antiporter 21 no no 0.878 0.475 0.314 2e-50
Q9LUN4800 Cation/H(+) antiporter 19 no no 0.773 0.436 0.322 5e-48
Q9FYC1817 Cation/H(+) antiporter 4 no no 0.926 0.511 0.282 3e-47
Q9M353842 Cation/H(+) antiporter 20 no no 0.904 0.484 0.28 5e-46
>sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1 Back     alignment and function desciption
 Score =  276 bits (707), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 151/390 (38%), Positives = 231/390 (59%), Gaps = 19/390 (4%)

Query: 6   VIPAGPPLGSALVEKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLG 65
           VIP GP LG  L+EK E  +    LP  F   GL T+I +I+    +++L +++  A  G
Sbjct: 301 VIPNGP-LGLTLIEKLEDFVSGLLLPLFFAISGLKTNIAAIQGPATWLTLFLVIFLACAG 359

Query: 66  KVWGSLLSLIWFKTSTRNDLLFGCFLNIKGIIELLVFLRWIIYKPIDVQTFSTLVLFNLV 125
           KV G+++   +     R  +  G  LN KG++E++V       K +D +TF+T+VL  LV
Sbjct: 360 KVIGTVIVAFFHGMPVREGITLGLLLNTKGLVEMIVLNVGKDQKVLDDETFATMVLVALV 419

Query: 126 LTAIVTPLISIFYKPRKRLDRISKIDNCIRTLQSTLPNSELRILCCIHHEDNVNGIINLL 185
           +T ++TP+++I YKP K+      +    RT+Q T P+SELR+L C+H   NV  IINLL
Sbjct: 420 MTGVITPIVTILYKPVKK-----SVSYKRRTIQQTKPDSELRVLVCVHTPRNVPTIINLL 474

Query: 186 RASNPTEMNPICAYAVHLIDLVGRALPVIVPYNTQKR-RLVANST----DRIMRAMTRYS 240
            AS+PT+ +PIC Y +HL++L GRA  +++ +NT+K  R   N T    D I+ A   Y 
Sbjct: 475 EASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYE 534

Query: 241 KGSGAAVKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHE----NGEFQSRTACVQN 296
           +   A V VQP   ISPY+TMH+ +C L ED  +  +++PFH+    +G  +S     + 
Sbjct: 535 Q-HAAFVAVQPLTAISPYSTMHEDVCSLAEDKRVSFIIIPFHKQQTVDGGMESTNPAYRL 593

Query: 297 FNKNVLSYAPCTVGIFVDRGL---TYYHPSNICYNVAVFFLGGPDDREAMALVSRISSHP 353
            N+N+L  +PC+VGI VDRGL   T  + + +   VAV F GGPDDREA+A   R++ HP
Sbjct: 594 VNQNLLENSPCSVGILVDRGLNGATRLNSNTVSLQVAVLFFGGPDDREALAYAWRMAQHP 653

Query: 354 GMSITIFRIDLLENSVESENDRCLDDAVTK 383
           G+++T+ R    E+  ++ + R  +D+  K
Sbjct: 654 GITLTVLRFIHDEDEADTASTRATNDSDLK 683
May operate as a cation/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9FFR9|CHX18_ARATH Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 PE=2 SV=1 Back     alignment and function description
>sp|Q9FGH6|CHX25_ARATH Cation/H(+) antiporter 25 OS=Arabidopsis thaliana GN=CHX25 PE=2 SV=1 Back     alignment and function description
>sp|Q1HDT2|CHX24_ARATH Cation/H(+) antiporter 24 OS=Arabidopsis thaliana GN=CHX24 PE=2 SV=2 Back     alignment and function description
>sp|Q9FFB8|CHX3_ARATH Cation/H(+) antiporter 3 OS=Arabidopsis thaliana GN=CHX3 PE=2 SV=1 Back     alignment and function description
>sp|Q8VYD4|CHX23_ARATH Cation/H(+) antiporter 23, chloroplastic OS=Arabidopsis thaliana GN=CHX23 PE=1 SV=1 Back     alignment and function description
>sp|Q9SKA9|CHX21_ARATH Cation/H(+) antiporter 21 OS=Arabidopsis thaliana GN=CHX21 PE=2 SV=2 Back     alignment and function description
>sp|Q9LUN4|CHX19_ARATH Cation/H(+) antiporter 19 OS=Arabidopsis thaliana GN=CHX19 PE=2 SV=1 Back     alignment and function description
>sp|Q9FYC1|CHX4_ARATH Cation/H(+) antiporter 4 OS=Arabidopsis thaliana GN=CHX4 PE=2 SV=1 Back     alignment and function description
>sp|Q9M353|CHX20_ARATH Cation/H(+) antiporter 20 OS=Arabidopsis thaliana GN=CHX20 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query451
255576723 789 K(+)/H(+) antiporter, putative [Ricinus 0.926 0.529 0.423 2e-90
255559551 1512 monovalent cation:proton antiporter, put 0.917 0.273 0.417 6e-89
357432837 871 monovalent cation H+ exchanger 23 [Glyci 0.926 0.479 0.377 3e-81
356569280 1584 PREDICTED: uncharacterized protein LOC10 0.926 0.263 0.377 5e-81
255559563 746 monovalent cation:proton antiporter, put 0.922 0.557 0.380 3e-76
357461421 827 Cation proton exchanger [Medicago trunca 0.931 0.507 0.350 8e-76
449459268 837 PREDICTED: cation/H(+) antiporter 15-lik 0.933 0.502 0.379 5e-75
357461423 821 K(+)/H(+) antiporter [Medicago truncatul 0.975 0.535 0.336 2e-73
15225447 821 cation/H(+) antiporter 15 [Arabidopsis t 0.822 0.451 0.387 1e-71
296088536 820 unnamed protein product [Vitis vinifera] 0.931 0.512 0.348 3e-71
>gi|255576723|ref|XP_002529249.1| K(+)/H(+) antiporter, putative [Ricinus communis] gi|223531285|gb|EEF33127.1| K(+)/H(+) antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 183/432 (42%), Positives = 272/432 (62%), Gaps = 14/432 (3%)

Query: 6   VIPAGPPLGSALVEKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLG 65
           +IP GPPLG+ LVEKSE+++   FLP  F+++G LTD+ S+++ KA   + +++    L 
Sbjct: 310 IIPDGPPLGAILVEKSELMVMEIFLPLFFVQVGYLTDVSSLQNIKAVTVVLLLVTVCCLT 369

Query: 66  KVWGSLLSLIWFKTSTRNDLLFGCFLNIKGIIELLVFLRWIIYKPIDVQTFSTLVLFNLV 125
           K+ G+LL+ ++     +  L  G  LN KG+++L  F R+     ++ + ++ LVLFNL+
Sbjct: 370 KIIGTLLASLYLNIKFQTALFLGLILNFKGVVDLTTFHRFQSRNILEKRCYTALVLFNLL 429

Query: 126 LTAIVTPLISIFYKPRKRL-DRISKIDNCIRTLQSTLPNSELRILCCIHHEDNVNGIINL 184
           + AI  PLI  FYKPR RL  R SK     R LQST    ELR L CI+HE+NV G+I L
Sbjct: 430 VVAIFYPLIEFFYKPRIRLAGRYSKTKYS-RALQSTPQAEELRALTCIYHENNVPGMIAL 488

Query: 185 LRASNPTEMNPICAYAVHLIDLVGRALPVIVPYNTQKR---RLVANSTDRIMRAMTRYSK 241
           L ASN   ++P+CAY VH++DLVGR  P ++PY  + R       +S+ RIM A   YSK
Sbjct: 489 LDASNHRAISPLCAYVVHVVDLVGRTAPSLLPYKGKTRMSNHDPCSSSSRIMSAFINYSK 548

Query: 242 GSGAAVKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHENG--EFQSRTACV-QNFN 298
            +   V +QPF M++P+ TMH  IC L E+NLIP +++PFHEN   +  S+   V Q+FN
Sbjct: 549 TASGRVSLQPFTMVAPFRTMHNIICNLAEENLIPFIIVPFHENQILDLNSKQKGVLQDFN 608

Query: 299 KNVLSYAPCTVGIFVDRGLTYYHPS-NICYNVAVFFLGGPDDREAMALVSRISSHPGMSI 357
             + ++APCTVGI  DRGL    P  N C  + V F+GG DDREA+AL  R+S +P M+I
Sbjct: 609 SQLQAHAPCTVGILYDRGL---QPRLNKC-RIVVVFIGGADDREALALAIRMSGNPDMNI 664

Query: 358 TIFRIDLLENSVESENDRCLDDAVTKEFMVGNVGNTRVECHEMVANDSKQLMDAIKK-EK 416
           T+ RI+  ++   S  +  LD+ + KEF+  N+ N R+ C ++  NDS Q+++A++   +
Sbjct: 665 TMLRINSAKDKDRSITEAQLDELLVKEFIDNNLNNPRILCQQVSVNDSLQMLNAVQSLRR 724

Query: 417 DFELVIVDFAEG 428
           +++LV+V    G
Sbjct: 725 NYDLVMVGKNSG 736

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255559551|ref|XP_002520795.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223539926|gb|EEF41504.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357432837|gb|AET79251.1| monovalent cation H+ exchanger 23 [Glycine max] Back     alignment and taxonomy information
>gi|356569280|ref|XP_003552831.1| PREDICTED: uncharacterized protein LOC100781310 [Glycine max] Back     alignment and taxonomy information
>gi|255559563|ref|XP_002520801.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223539932|gb|EEF41510.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357461421|ref|XP_003600992.1| Cation proton exchanger [Medicago truncatula] gi|355490040|gb|AES71243.1| Cation proton exchanger [Medicago truncatula] Back     alignment and taxonomy information
>gi|449459268|ref|XP_004147368.1| PREDICTED: cation/H(+) antiporter 15-like [Cucumis sativus] gi|449513321|ref|XP_004164295.1| PREDICTED: cation/H(+) antiporter 15-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357461423|ref|XP_003600993.1| K(+)/H(+) antiporter [Medicago truncatula] gi|355490041|gb|AES71244.1| K(+)/H(+) antiporter [Medicago truncatula] Back     alignment and taxonomy information
>gi|15225447|ref|NP_178985.1| cation/H(+) antiporter 15 [Arabidopsis thaliana] gi|75313480|sp|Q9SIT5.1|CHX15_ARATH RecName: Full=Cation/H(+) antiporter 15; AltName: Full=Protein CATION/H+ EXCHANGER 15; Short=AtCHX15 gi|4558666|gb|AAD22684.1| putative Na/H antiporter [Arabidopsis thaliana] gi|61658321|gb|AAX49544.1| cation/H+ exchanger [Arabidopsis thaliana] gi|330251152|gb|AEC06246.1| cation/H(+) antiporter 15 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|296088536|emb|CBI37527.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query451
TAIR|locus:2054152821 CHX15 "cation/hydrogen exchang 0.822 0.451 0.387 1e-68
TAIR|locus:2172631822 CHX3 "cation/H+ exchanger 3" [ 0.674 0.369 0.314 1.1e-54
TAIR|locus:2166168859 CHX24 "cation/H+ exchanger 24" 0.689 0.362 0.284 7.7e-54
TAIR|locus:2171238857 CHX25 "cation/H+ exchanger 25" 0.689 0.362 0.278 3.7e-51
TAIR|locus:2160457810 CHX18 "cation/H+ exchanger 18" 0.780 0.434 0.339 5e-50
TAIR|locus:2007392829 CHX14 "cation/hydrogen exchang 0.917 0.499 0.305 3.5e-47
TAIR|locus:2084370842 CHX20 "cation/H+ exchanger 20" 0.605 0.324 0.301 4e-47
TAIR|locus:2090462800 CHX19 "cation/H+ exchanger 19" 0.911 0.513 0.301 6e-47
TAIR|locus:2060827831 ATCHX13 [Arabidopsis thaliana 0.917 0.498 0.299 7.3e-46
TAIR|locus:2082142817 CHX4 "cation/H+ exchanger 4" [ 0.915 0.505 0.289 1.4e-45
TAIR|locus:2054152 CHX15 "cation/hydrogen exchanger 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
 Identities = 151/390 (38%), Positives = 232/390 (59%)

Query:     6 VIPAGPPLGSALVEKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLG 65
             VIP GP LG  L+EK E  +    LP  F   GL T+I +I+    +++L +++  A  G
Sbjct:   301 VIPNGP-LGLTLIEKLEDFVSGLLLPLFFAISGLKTNIAAIQGPATWLTLFLVIFLACAG 359

Query:    66 KVWGSLLSLIWFKTSTRNDLLFGCFLNIKGIIELLVFLRWIIYKPIDVQTFSTLVLFNLV 125
             KV G+++   +     R  +  G  LN KG++E++V       K +D +TF+T+VL  LV
Sbjct:   360 KVIGTVIVAFFHGMPVREGITLGLLLNTKGLVEMIVLNVGKDQKVLDDETFATMVLVALV 419

Query:   126 LTAIVTPLISIFYKPRKRLDRISKIDNCIRTLQSTLPNSELRILCCIHHEDNVNGIINLL 185
             +T ++TP+++I YKP K+     +     RT+Q T P+SELR+L C+H   NV  IINLL
Sbjct:   420 MTGVITPIVTILYKPVKKSVSYKR-----RTIQQTKPDSELRVLVCVHTPRNVPTIINLL 474

Query:   186 RASNPTEMNPICAYAVHLIDLVGRALPVIVPYNTQKR-RLVANST----DRIMRAMTRYS 240
              AS+PT+ +PIC Y +HL++L GRA  +++ +NT+K  R   N T    D I+ A   Y 
Sbjct:   475 EASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYE 534

Query:   241 KGSGAAVKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHE----NGEFQSRTACVQN 296
             + + A V VQP   ISPY+TMH+ +C L ED  +  +++PFH+    +G  +S     + 
Sbjct:   535 QHA-AFVAVQPLTAISPYSTMHEDVCSLAEDKRVSFIIIPFHKQQTVDGGMESTNPAYRL 593

Query:   297 FNKNVLSYAPCTVGIFVDRGL---TYYHPSNICYNVAVFFLGGPDDREAMALVSRISSHP 353
              N+N+L  +PC+VGI VDRGL   T  + + +   VAV F GGPDDREA+A   R++ HP
Sbjct:   594 VNQNLLENSPCSVGILVDRGLNGATRLNSNTVSLQVAVLFFGGPDDREALAYAWRMAQHP 653

Query:   354 GMSITIFRIDLLENSVESENDRCLDDAVTK 383
             G+++T+ R    E+  ++ + R  +D+  K
Sbjct:   654 GITLTVLRFIHDEDEADTASTRATNDSDLK 683
GO:0006812 "cation transport" evidence=IEA;IC
GO:0009507 "chloroplast" evidence=ISM
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0035725 "sodium ion transmembrane transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005451 "monovalent cation:hydrogen antiporter activity" evidence=NAS
GO:0006885 "regulation of pH" evidence=IMP
GO:0009827 "plant-type cell wall modification" evidence=RCA
GO:0009860 "pollen tube growth" evidence=RCA
TAIR|locus:2172631 CHX3 "cation/H+ exchanger 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166168 CHX24 "cation/H+ exchanger 24" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171238 CHX25 "cation/H+ exchanger 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160457 CHX18 "cation/H+ exchanger 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007392 CHX14 "cation/hydrogen exchanger 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084370 CHX20 "cation/H+ exchanger 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090462 CHX19 "cation/H+ exchanger 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060827 ATCHX13 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082142 CHX4 "cation/H+ exchanger 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query451
PLN03159832 PLN03159, PLN03159, cation/H(+) antiporter 15; Pro 3e-85
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 1e-07
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 0.001
>gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
 Score =  277 bits (711), Expect = 3e-85
 Identities = 158/462 (34%), Positives = 258/462 (55%), Gaps = 41/462 (8%)

Query: 6   VIPAGPPLGSALVEKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLG 65
           VIP GP LG  L+EK E  +    LP  F   GL T++  I+    +  L ++++ A  G
Sbjct: 305 VIPNGP-LGVTLIEKLEDFVSGLLLPLFFAISGLKTNVTKIQGPATWGLLVLVIIMASAG 363

Query: 66  KVWGSLLSLIWFKTSTRNDLLFGCFLNIKGIIELLVFLRWIIYKPIDVQTFSTLVLFNLV 125
           K+ G+++   ++    R  +  G  +N KG++E++V       + +D ++F+ +VL  + 
Sbjct: 364 KIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQEVLDDESFAVMVLVAVA 423

Query: 126 LTAIVTPLISIFYKPRKRLDRISKIDNCIRTLQSTLPNSELRILCCIHHEDNVNGIINLL 185
           +TA++TP++++ Y+P +RL    +     RT+Q +  ++ELR+L C+H   NV  IINLL
Sbjct: 424 MTALITPVVTVVYRPARRLVGYKR-----RTIQRSKHDAELRMLVCVHTPRNVPTIINLL 478

Query: 186 RASNPTEMNPICAYAVHLIDLVGRALPVIVPYNTQK-RRLVANST----DRIMRAMTRYS 240
            AS+PT+ +PIC Y +HL++L GRA  +++ +NT+K  R   N T    D I+ A   Y 
Sbjct: 479 EASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYE 538

Query: 241 KGSGAAVKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHE----NGEFQSRTACVQN 296
           + +G  V VQP   ISPY+TMH+ +C L ED  + L+++PFH+    +G  ++     + 
Sbjct: 539 QHAG-CVSVQPLTAISPYSTMHEDVCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRG 597

Query: 297 FNKNVLSYAPCTVGIFVDRGL---TYYHPSNICYNVAVFFLGGPDDREAMALVSRISSHP 353
            N+NVL+ APC+VGI VDRGL   T    + + ++VAV F GGPDDREA+A   R+S HP
Sbjct: 598 VNQNVLANAPCSVGILVDRGLSGATRLASNQVSHHVAVLFFGGPDDREALAYAWRMSEHP 657

Query: 354 GMSITIFRI--------------------DLLENSVESENDRCLDDAVTKEFMVGNVGNT 393
           G+++T+ R                      +     + + +R LD+    EF   N GN 
Sbjct: 658 GITLTVMRFIPGEDAAPTASQPASSPSDPRIPTVETDGKKERQLDEEYINEFRARNAGNE 717

Query: 394 RVECHEMVANDSKQLMDAIKK-EKDFELVIVDFAEGHMMSLL 434
            +   E V ++ ++ + AI+  +   +L IV   +G M+S L
Sbjct: 718 SIVYTEKVVSNGEETVAAIRSMDSAHDLFIVGRGQG-MISPL 758

Length = 832
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 451
PLN03159832 cation/H(+) antiporter 15; Provisional 100.0
KOG1650769 consensus Predicted K+/H+-antiporter [Inorganic io 100.0
PRK11175305 universal stress protein UspE; Provisional 99.9
PRK03659601 glutathione-regulated potassium-efflux system prot 99.77
PRK03562621 glutathione-regulated potassium-efflux system prot 99.76
PRK10669558 putative cation:proton antiport protein; Provision 99.76
COG0475397 KefB Kef-type K+ transport systems, membrane compo 99.65
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 99.61
PRK15456142 universal stress protein UspG; Provisional 99.46
PRK15005144 universal stress protein F; Provisional 99.45
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 99.45
PRK15118144 universal stress global response regulator UspA; P 99.41
PRK09982142 universal stress protein UspD; Provisional 99.39
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 99.38
cd01987124 USP_OKCHK USP domain is located between the N-term 99.34
PF00582140 Usp: Universal stress protein family; InterPro: IP 99.27
PRK10116142 universal stress protein UspC; Provisional 99.22
PRK11175305 universal stress protein UspE; Provisional 99.12
cd00293130 USP_Like Usp: Universal stress protein family. The 99.11
PRK05326562 potassium/proton antiporter; Reviewed 99.07
cd01987124 USP_OKCHK USP domain is located between the N-term 99.05
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 99.01
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 99.0
PRK15005144 universal stress protein F; Provisional 98.96
PRK09982142 universal stress protein UspD; Provisional 98.94
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.91
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 98.88
PRK15456142 universal stress protein UspG; Provisional 98.88
PRK15118144 universal stress global response regulator UspA; P 98.81
COG0589154 UspA Universal stress protein UspA and related nuc 98.66
PRK10116142 universal stress protein UspC; Provisional 98.66
cd00293130 USP_Like Usp: Universal stress protein family. The 98.62
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 98.26
PRK12652357 putative monovalent cation/H+ antiporter subunit E 98.23
COG0589154 UspA Universal stress protein UspA and related nuc 98.17
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 98.14
PRK12652 357 putative monovalent cation/H+ antiporter subunit E 97.52
PRK10490 895 sensor protein KdpD; Provisional 97.37
PRK10490 895 sensor protein KdpD; Provisional 97.32
COG2205 890 KdpD Osmosensitive K+ channel histidine kinase [Si 97.04
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 96.27
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 95.92
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 95.78
COG2205 890 KdpD Osmosensitive K+ channel histidine kinase [Si 95.77
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 95.61
TIGR00844810 c_cpa1 na(+)/h(+) antiporter. This model is specif 95.47
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 95.08
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 94.99
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 94.71
TIGR03136399 malonate_biotin Na+-transporting malonate decarbox 93.51
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 93.5
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 92.62
PF03977360 OAD_beta: Na+-transporting oxaloacetate decarboxyl 92.56
TIGR00840559 b_cpa1 sodium/hydrogen exchanger 3. This model is 92.53
PRK03562 621 glutathione-regulated potassium-efflux system prot 92.15
PRK15475433 oxaloacetate decarboxylase subunit beta; Provision 92.08
PRK15476433 oxaloacetate decarboxylase subunit beta; Provision 91.97
PRK15477433 oxaloacetate decarboxylase subunit beta; Provision 91.96
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 91.79
TIGR00930 953 2a30 K-Cl cotransporter. 91.31
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 91.24
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 90.73
COG1883375 OadB Na+-transporting methylmalonyl-CoA/oxaloaceta 90.69
TIGR00793314 kdgT 2-keto-3-deoxygluconate transporter. This fam 90.29
PRK05326562 potassium/proton antiporter; Reviewed 89.65
PRK10669558 putative cation:proton antiport protein; Provision 89.58
COG1646240 Predicted phosphate-binding enzymes, TIM-barrel fo 89.15
TIGR02432189 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-t 88.85
PF03812314 KdgT: 2-keto-3-deoxygluconate permease; InterPro: 88.58
PRK03659 601 glutathione-regulated potassium-efflux system prot 88.52
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 87.04
PRK05274326 2-keto-3-deoxygluconate permease; Provisional 86.7
TIGR01109354 Na_pump_decarbB sodium ion-translocating decarboxy 86.42
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 85.6
cd01992185 PP-ATPase N-terminal domain of predicted ATPase of 85.33
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 85.26
COG3493438 CitS Na+/citrate symporter [Energy production and 84.28
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 84.24
PRK05253 301 sulfate adenylyltransferase subunit 2; Provisional 84.17
PRK03359 256 putative electron transfer flavoprotein FixA; Revi 84.07
COG2855334 Predicted membrane protein [Function unknown] 83.77
KOG1288 945 consensus Amino acid transporters [Amino acid tran 83.1
COG1346230 LrgB Putative effector of murein hydrolase [Cell e 81.91
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 81.47
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 81.45
COG0037 298 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle 81.35
COG0475397 KefB Kef-type K+ transport systems, membrane compo 80.52
PLN03159 832 cation/H(+) antiporter 15; Provisional 80.5
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 80.37
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 80.3
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.9e-85  Score=720.10  Aligned_cols=425  Identities=36%  Similarity=0.662  Sum_probs=385.0

Q ss_pred             eeEEecCCCCchhHHHHhhhhhhhhhhhhHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Q 042567            3 HLWVIPAGPPLGSALVEKSEVVIRNFFLPFLFIRIGLLTDIFSIKDWKAFVSLGMILVAAYLGKVWGSLLSLIWFKTSTR   82 (451)
Q Consensus         3 ~gl~~p~~~~~~~~l~~ki~~~~~~~fiPlFF~~~Gl~~d~~~l~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~   82 (451)
                      +|+++|+ +|+++++.+|++++++++|+|+||+++||++|+..+.++..|+++++++++++++|+++++++++++|+|++
T Consensus       302 aGl~lp~-~~~~~~l~ekle~~~~~lflPlFFv~vGl~idl~~l~~~~~~~~~~~liv~a~~gK~~g~~l~a~~~g~~~~  380 (832)
T PLN03159        302 FGLVIPN-GPLGVTLIEKLEDFVSGLLLPLFFAISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFR  380 (832)
T ss_pred             HhhccCC-cchHHHHHHHHHHHHHHHHHHHHHHHhhheeeHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence            6999998 599999999999999999999999999999999988765567777788889999999999999999999999


Q ss_pred             hHHHHHHHhhhhHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHhHHHHHHHhcCcccchhccccchhhhccccCCCC
Q 042567           83 NDLLFGCFLNIKGIIELLVFLRWIIYKPIDVQTFSTLVLFNLVLTAIVTPLISIFYKPRKRLDRISKIDNCIRTLQSTLP  162 (451)
Q Consensus        83 ~s~~~g~~m~~~G~~~li~~~~~~~~g~i~~~~~~~~v~~~~vtt~i~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (451)
                      |++.+|++||+||+++++++++|++.|+++++.|++++++++++|.+++|++.++|+|+|||..|++     |++|+.++
T Consensus       381 eal~lG~lm~~kG~~~Lii~~ig~~~gvi~~~~f~~lVl~avl~T~i~~Plv~~ly~p~rk~~~~~~-----r~i~~~~~  455 (832)
T PLN03159        381 EGITLGFLMNTKGLVEMIVLNVGRDQEVLDDESFAVMVLVAVAMTALITPVVTVVYRPARRLVGYKR-----RTIQRSKH  455 (832)
T ss_pred             HHHHHHHHHhcccHHHHHHHHHHHhcCccCchhhhHHHHHHHHHHHHHHHHHHHHhCHHhhhccccc-----cccccCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999998     99999999


Q ss_pred             CCcceEEEEecCCCCHHHHHHHHHHhCCCCCCCceEEEEEEeeccCCCCccccccccccccc-----ccccHHHHHHHHH
Q 042567          163 NSELRILCCIHHEDNVNGIINLLRASNPTEMNPICAYAVHLIDLVGRALPVIVPYNTQKRRL-----VANSTDRIMRAMT  237 (451)
Q Consensus       163 ~~~~rILv~v~~~~~~~~ll~la~~la~~~~~~~~v~~Lhlvel~~r~~~~~~~~~~~~~~~-----~~~~~~~i~~~f~  237 (451)
                      ++|+|||+|+|++++++++++|++.+++++++|.++|+||++|+++|+++.++.|+.++...     .....|++.++|+
T Consensus       456 ~~elriL~cv~~~~~v~~li~Lle~s~~t~~sp~~vy~lhLveL~~r~~~~l~~h~~~~~~~~~~~~~~~~~~~i~~af~  535 (832)
T PLN03159        456 DAELRMLVCVHTPRNVPTIINLLEASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFE  535 (832)
T ss_pred             CCceeEEEEeccCCcHHHHHHHHHhcCCCCCCCceEEEEEEEeecCCCccceeeeecccccccccccccccccHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999997643211     0245799999999


Q ss_pred             HHHhcCCCceeEeeEEEEcCCCCchHhHHHHHHhCCCCEEEEeccC----CCcccccchhhhHHHHHHhhcCCccEEEee
Q 042567          238 RYSKGSGAAVKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHE----NGEFQSRTACVQNFNKNVLSYAPCTVGIFV  313 (451)
Q Consensus       238 ~~~~~~~~~V~v~~~~~vs~~~~~~~~I~~~A~e~~~dLIvlg~h~----~G~~e~~~~~~gs~~~~Vl~~apc~V~Ilv  313 (451)
                      .|++.+ ++|+++++|++||+++||+|||+.|+|+++++||+|||+    ||.++..+..+|.+|++|+++|||+|||||
T Consensus       536 ~~~~~~-~~v~v~~~t~vs~~~~mh~dIc~~A~d~~~slIilpfhk~~~~dg~~~~~~~~~r~~n~~VL~~ApCsVgIlV  614 (832)
T PLN03159        536 NYEQHA-GCVSVQPLTAISPYSTMHEDVCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILV  614 (832)
T ss_pred             HHHhhc-CceEEEEEEEEeCcccHHHHHHHHHHhcCCCEEEECCCCccCCCCCccccCchHHHHHHHHHccCCCCEEEEE
Confidence            999754 589999999999999999999999999999999999998    788887788999999999999999999999


Q ss_pred             cCCCCCCC---CCCcceeEEEEecCCcchHHHHHHHHHHhcCCCeEEEEEEEecCCCCcc--------------------
Q 042567          314 DRGLTYYH---PSNICYNVAVFFLGGPDDREAMALVSRISSHPGMSITIFRIDLLENSVE--------------------  370 (451)
Q Consensus       314 dr~~~~~~---~~~~~~~I~v~f~Gg~ddreAl~~a~rma~~~~~~ltvv~v~~~~~~~~--------------------  370 (451)
                      |||.....   ..+..+||+++|+||+||||||+||+|||+|+++++||+||...++...                    
T Consensus       615 DRg~~~~~~~~~~~~~~~v~~~F~GG~DDREALa~a~rma~~p~v~lTVirf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  694 (832)
T PLN03159        615 DRGLSGATRLASNQVSHHVAVLFFGGPDDREALAYAWRMSEHPGITLTVMRFIPGEDAAPTASQPASSPSDPRIPTVETD  694 (832)
T ss_pred             eCCCCccccccccccceeEEEEecCCcchHHHHHHHHHHhcCCCeEEEEEEEEccccccccccccccccccccccccccc
Confidence            99965321   1223479999999999999999999999999999999999986532211                    


Q ss_pred             CchhhhcHHHHHHHHHhccCCCCCeEEEEEEeCChHHHHHHHHhcC-CCcEEEEcccCCCCcchh
Q 042567          371 SENDRCLDDAVTKEFMVGNVGNTRVECHEMVANDSKQLMDAIKKEK-DFELVIVDFAEGHMMSLL  434 (451)
Q Consensus       371 ~~~~~~~~~~~l~e~~~~~~~~~~v~y~e~~v~~g~~~~~~i~~~~-~~DLiivG~~~~~~~~~~  434 (451)
                      ++.|++.|+++++||+.++..++++.|.|++|+||.|+++.+++++ +|||++|||+|+..+.+.
T Consensus       695 ~~~e~~~D~~~~~ef~~~~~~~~~v~y~E~~V~~~~e~~~~l~~~~~~ydL~iVGr~~~~~~~~~  759 (832)
T PLN03159        695 GKKERQLDEEYINEFRARNAGNESIVYTEKVVSNGEETVAAIRSMDSAHDLFIVGRGQGMISPLT  759 (832)
T ss_pred             chhHHHHHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHHHHHhhccCcEEEEecCCCCCcchh
Confidence            2347789999999999998777899999999999999999999998 799999999876533343

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>TIGR03136 malonate_biotin Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PF03977 OAD_beta: Na+-transporting oxaloacetate decarboxylase beta subunit; InterPro: IPR005661 Members of this family are integral membrane proteins Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK15475 oxaloacetate decarboxylase subunit beta; Provisional Back     alignment and domain information
>PRK15476 oxaloacetate decarboxylase subunit beta; Provisional Back     alignment and domain information
>PRK15477 oxaloacetate decarboxylase subunit beta; Provisional Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00930 2a30 K-Cl cotransporter Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>COG1883 OadB Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit [Energy production and conversion] Back     alignment and domain information
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>COG1646 Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only] Back     alignment and domain information
>TIGR02432 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-terminal domain Back     alignment and domain information
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>PRK05274 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>TIGR01109 Na_pump_decarbB sodium ion-translocating decarboxylase, beta subunit Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>cd01992 PP-ATPase N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning] Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>COG3493 CitS Na+/citrate symporter [Energy production and conversion] Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>PRK05253 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG1288 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>COG0037 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query451
3mt0_A290 Uncharacterized protein PA1789; structural genomic 99.9
3olq_A319 Universal stress protein E; structural genomics, P 99.89
3loq_A294 Universal stress protein; structural genomics, PSI 99.88
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 99.87
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 99.86
3fdx_A143 Putative filament protein / universal stress PROT; 99.46
3s3t_A146 Nucleotide-binding protein, universal stress PROT 99.43
3tnj_A150 Universal stress protein (USP); structural genomic 99.42
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 99.41
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 99.4
2z08_A137 Universal stress protein family; uncharacterized c 99.39
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 99.38
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 99.37
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.37
3dlo_A155 Universal stress protein; unknown function, struct 99.36
3fg9_A156 Protein of universal stress protein USPA family; A 99.36
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 99.33
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 99.32
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 99.32
1q77_A138 Hypothetical protein AQ_178; structural genomics, 99.13
3mt0_A290 Uncharacterized protein PA1789; structural genomic 99.1
3s3t_A146 Nucleotide-binding protein, universal stress PROT 99.05
3olq_A319 Universal stress protein E; structural genomics, P 99.02
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 99.02
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 99.01
3dlo_A155 Universal stress protein; unknown function, struct 98.99
3fdx_A143 Putative filament protein / universal stress PROT; 98.98
2z08_A137 Universal stress protein family; uncharacterized c 98.97
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 98.97
3tnj_A150 Universal stress protein (USP); structural genomic 98.94
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 98.94
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 98.93
3loq_A294 Universal stress protein; structural genomics, PSI 98.91
3fg9_A156 Protein of universal stress protein USPA family; A 98.85
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 98.84
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 98.73
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 98.64
1q77_A138 Hypothetical protein AQ_178; structural genomics, 98.46
3ab8_A 268 Putative uncharacterized protein TTHA0350; tandem- 98.41
3g40_A294 Na-K-CL cotransporter; alpha/beta fold 10-stranded 96.89
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=99.90  E-value=1.3e-22  Score=197.58  Aligned_cols=244  Identities=9%  Similarity=0.063  Sum_probs=170.6

Q ss_pred             eEEEEecCCCCHHHHHHHHHHhCCCCCCCceEEEEEEeeccCCCCcccccccccccccccccHHHHHHHHHHHHhcCCCc
Q 042567          167 RILCCIHHEDNVNGIINLLRASNPTEMNPICAYAVHLIDLVGRALPVIVPYNTQKRRLVANSTDRIMRAMTRYSKGSGAA  246 (451)
Q Consensus       167 rILv~v~~~~~~~~ll~la~~la~~~~~~~~v~~Lhlvel~~r~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~~~~  246 (451)
                      |||+|+|+++....+++.|..++..  .+..++++|+++ +         .   +.   ....+++.+.++   .   .+
T Consensus         9 ~ILv~~D~s~~s~~al~~A~~la~~--~~a~l~ll~v~~-~---------~---~~---~~~l~~~~~~~~---~---~~   64 (290)
T 3mt0_A            9 SILVVIEPDQLEGLALKRAQLIAGV--TQSHLHLLVCEK-R---------R---DH---SAALNDLAQELR---E---EG   64 (290)
T ss_dssp             EEEEECCSSCSCCHHHHHHHHHHHH--HCCEEEEEEECS-S---------S---CC---HHHHHHHHHHHH---H---TT
T ss_pred             eEEEEeCCCccchHHHHHHHHHHHh--cCCeEEEEEeeC-c---------H---HH---HHHHHHHHHHHh---h---CC
Confidence            8999999999999999999999954  567899999986 1         0   11   122333333332   2   36


Q ss_pred             eeEeeEEEEcCCCCchHhHHHHHHhCCCCEEEEeccCCCcccccchhhhHHHHHHhhcCCccEEEeecCCCCCCCCCCcc
Q 042567          247 VKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHENGEFQSRTACVQNFNKNVLSYAPCTVGIFVDRGLTYYHPSNIC  326 (451)
Q Consensus       247 V~v~~~~~vs~~~~~~~~I~~~A~e~~~dLIvlg~h~~G~~e~~~~~~gs~~~~Vl~~apc~V~Ilvdr~~~~~~~~~~~  326 (451)
                      +.++..+...  +++.+.|++.|++.++||||||+++.+..  ...++|++.++++++++|||+++......      ..
T Consensus        65 ~~~~~~~~~~--g~~~~~i~~~a~~~~~dliV~G~~~~~~~--~~~~~gs~~~~vl~~~~~PVlvv~~~~~~------~~  134 (290)
T 3mt0_A           65 YSVSTNQAWK--DSLHQTIIAEQQAEGCGLIIKQHFPDNPL--KKAILTPDDWKLLRFAPCPVLMTKTARPW------TG  134 (290)
T ss_dssp             CCEEEEEECS--SSHHHHHHHHHHHHTCSEEEEECCCSCTT--STTSCCHHHHHHHHHCSSCEEEECCCSCS------TT
T ss_pred             CeEEEEEEeC--CCHHHHHHHHHHhcCCCEEEEecccCCch--hhcccCHHHHHHHhcCCCCEEEecCCCCC------CC
Confidence            7777666543  78999999999999999999999983332  34478999999999999999886422211      12


Q ss_pred             eeEEEEecCCcc-------hHHHHHHHHHHhcCCCeEEEEEEEecCCCCcc-------CchhhhcHHHHHHHHHhccCCC
Q 042567          327 YNVAVFFLGGPD-------DREAMALVSRISSHPGMSITIFRIDLLENSVE-------SENDRCLDDAVTKEFMVGNVGN  392 (451)
Q Consensus       327 ~~I~v~f~Gg~d-------dreAl~~a~rma~~~~~~ltvv~v~~~~~~~~-------~~~~~~~~~~~l~e~~~~~~~~  392 (451)
                      ++|++++-|+++       ++.|+++|.++|+..+++++++++..+.....       .+..++..++.++++..+.. .
T Consensus       135 ~~Ilva~D~s~~~~~~~~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-~  213 (290)
T 3mt0_A          135 GKILAAVDVGNNDGEHRSLHAGIISHAYDIAGLAKATLHVISAHPSPMLSSADPTFQLSETIEARYREACRTFQAEYG-F  213 (290)
T ss_dssp             CEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEC---------CHHHHHHHHHHHHHHHHHHHHHHT-C
T ss_pred             CeEEEEECCCCcchhhhHHHHHHHHHHHHHHHHcCCeEEEEEEecCccccccCchhHHHHHHHHHHHHHHHHHHHHcC-C
Confidence            799999998888       79999999999999999999999987532110       01111222344444443331 1


Q ss_pred             CCeEEEEEEeCCh-HHHHHHHHhcCCCcEEEEcccCCC-CcchhhhhhHHHHhhcCc
Q 042567          393 TRVECHEMVANDS-KQLMDAIKKEKDFELVIVDFAEGH-MMSLLVIQSVESIKQGAK  447 (451)
Q Consensus       393 ~~v~y~e~~v~~g-~~~~~~i~~~~~~DLiivG~~~~~-~~~~~~gs~~e~i~~~~~  447 (451)
                      ..+.+ .....+. ..+.+++++. ++|||+||++++. +.++|+||.++.|++|++
T Consensus       214 ~~~~~-~v~~g~~~~~I~~~a~~~-~~dLiVmG~~g~~~~~~~~~Gsv~~~vl~~~~  268 (290)
T 3mt0_A          214 SDEQL-HIEEGPADVLIPRTAQKL-DAVVTVIGTVARTGLSGALIGNTAEVVLDTLE  268 (290)
T ss_dssp             CTTTE-EEEESCHHHHHHHHHHHH-TCSEEEEECCSSCCGGGCCSCHHHHHHHTTCS
T ss_pred             CcceE-EEeccCHHHHHHHHHHhc-CCCEEEECCCCCcCCcceecchHHHHHHhcCC
Confidence            11111 1222232 3334444444 8999999999876 999999999999999987
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query451
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 99.53
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 99.52
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 99.44
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 99.34
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 99.31
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 99.25
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 99.09
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 99.01
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.91
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 98.77
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 98.73
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 98.4
d3clsc1 262 Small, beta subunit of electron transfer flavoprot 82.54
d1efpb_246 Small, beta subunit of electron transfer flavoprot 81.69
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: "Hypothetical" protein MJ0577
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.53  E-value=3.1e-14  Score=123.63  Aligned_cols=142  Identities=15%  Similarity=0.190  Sum_probs=97.1

Q ss_pred             eEEEEecCCCCHHHHHHHHHHhCCCCCCCceEEEEEEeeccCCCCccccccc-----ccc-ccc----c-cccHHHHHHH
Q 042567          167 RILCCIHHEDNVNGIINLLRASNPTEMNPICAYAVHLIDLVGRALPVIVPYN-----TQK-RRL----V-ANSTDRIMRA  235 (451)
Q Consensus       167 rILv~v~~~~~~~~ll~la~~la~~~~~~~~v~~Lhlvel~~r~~~~~~~~~-----~~~-~~~----~-~~~~~~i~~~  235 (451)
                      |||+|+|.++....+++.+..++..  .+.+++++|+++.............     ... ...    . ....+...+.
T Consensus         5 ~ILvavD~s~~s~~al~~a~~la~~--~~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
T d1mjha_           5 KILYPTDFSETAEIALKHVKAFKTL--KAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNK   82 (160)
T ss_dssp             EEEEECCSCHHHHHHHHHHHHTCCS--SCCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCHHHHHHHHHHHHHHHh--cCCEEEEEEecccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999954  6689999999986543221110000     000 000    0 1112233333


Q ss_pred             HHHHHhc-CCCceeEeeEEEEcCCCCchHhHHHHHHhCCCCEEEEeccCCCcccccchhhhHHHHHHhhcCCccEEEeec
Q 042567          236 MTRYSKG-SGAAVKVQPFKMISPYNTMHQSICKLVEDNLIPLVLLPFHENGEFQSRTACVQNFNKNVLSYAPCTVGIFVD  314 (451)
Q Consensus       236 f~~~~~~-~~~~V~v~~~~~vs~~~~~~~~I~~~A~e~~~dLIvlg~h~~G~~e~~~~~~gs~~~~Vl~~apc~V~Ilvd  314 (451)
                      ++.+.+. ...++.+++.+..   +++.+.|++.|++.++||||||+|+.|.+  .+.++||+.++|++++||||.|+..
T Consensus        83 l~~~~~~~~~~gv~~~~~~~~---G~~~~~I~~~a~~~~~dliV~G~~~~~~~--~~~~~GS~a~~vl~~s~~pVlvV~~  157 (160)
T d1mjha_          83 MENIKKELEDVGFKVKDIIVV---GIPHEEIVKIAEDEGVDIIIMGSHGKTNL--KEILLGSVTENVIKKSNKPVLVVKR  157 (160)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEE---ECHHHHHHHHHHHTTCSEEEEESCCSSCC--TTCSSCHHHHHHHHHCCSCEEEECC
T ss_pred             HHHHHHHHHhcCCeEEEEEEe---ccHHHHHhhhhhccccceEEeccCCCCcc--cccccCcHHHHHHhcCCCCEEEEcC
Confidence            4333322 1246777777665   78999999999999999999999983332  3447899999999999999988755


Q ss_pred             C
Q 042567          315 R  315 (451)
Q Consensus       315 r  315 (451)
                      +
T Consensus       158 ~  158 (160)
T d1mjha_         158 K  158 (160)
T ss_dssp             C
T ss_pred             C
Confidence            4
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d3clsc1 c.26.2.3 (C:1-262) Small, beta subunit of electron transfer flavoprotein ETFP {Methylophilus methylotrophus [TaxId: 17]} Back     information, alignment and structure
>d1efpb_ c.26.2.3 (B:) Small, beta subunit of electron transfer flavoprotein ETFP {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure