Citrus Sinensis ID: 042605


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
KFHQKQHLNLLLATLRSNTTHCSSDKFSEGLRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVIWYSECLLRYSNVSFFSAMDTKPFFYTSSTQNSTSRRLFEQQVWSLMNEALNRALSTTKCLGQQTKITQTARRMSAVSSYNIRYELYPFYNDTLIASPTSAPAQAPSPVVLPLPSPGSVTSAQGKGTKATWIAIGTTIPTIL
cccHHHHHHHHHHHHHHcccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHccccccEEEEEcccEEEEEcccccccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEcccc
ccccHHHHHHHHHHcHccccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEccccHHccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEcccccHHHccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEc
KFHQKQHLNLLLATLRsntthcssdkfsEGLRLFLccgdvstesckDCVNFATShitqlcpvrkeTVIWYSECLlrysnvsffsamdtkpffytsstqnstsrRLFEQQVWSLMNEALNRALSTTKCLGQQTKITQTARRMSAVSSYNiryelypfyndtliasptsapaqapspvvlplpspgsvtsaqgkgtkATWIAIGTTIPTIL
KFHQKQHLNLLLATLRSNTTHCSSDKFSEGLRLFLCCGDVSTESCKDCVNFATshitqlcpvrKETVIWYSECLLRYSNVSFFSAMDTKPFfytsstqnstsRRLFEQQVWSLMNEALNRALsttkclgqqtkitqtarrmsaVSSYNIRYELYPFYNDTLIASPTSAPAQAPSPVVLPLPSPGSVTsaqgkgtkatwiaigttiptil
KFHQKQHLNLLLATLRSNTTHCSSDKFSEGLRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVIWYSECLLRYSNVSFFSAMDTKPFFYTSSTQNSTSRRLFEQQVWSLMNEALNRALSTTKCLGQQTKITQTARRMSAVSSYNIRYELYPFYNDTLIasptsapaqapspvvlplpspgsvtsAQGKGTKATWIAIGTTIPTIL
*******LNLLLATLRSNTTHCSSDKFSEGLRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVIWYSECLLRYSNVSFFSAMDTKPFFYTSS******RRLFEQQVWSLMNEALNRALSTTKCLGQQTKITQTARRMSAVSSYNIRYELYPFYNDTLIA********************************ATWIAIGTTI****
*FHQKQHLNLLLATLRSNTTHCSSDKFSEGLRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVIWYSECLLRYSNVSFFSAMDTKPFFYTSSTQNSTSRRLFEQQVWSLMNEALNRALSTTKCLGQQTKITQTARRMSAVSSYNIRYELYPFYNDTL**************************************AIGTTIPTIL
KFHQKQHLNLLLATLRSNTTHCSSDKFSEGLRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVIWYSECLLRYSNVSFFSAMDTKPFFYTSSTQNSTSRRLFEQQVWSLMNEALNRALSTTKCLGQQTKITQTARRMSAVSSYNIRYELYPFYNDTLIASPTSAPAQAPSPVVLPLPS***********TKATWIAIGTTIPTIL
KFHQKQHLNLLLATLRSNTTHCSSDKFSEGLRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVIWYSECLLRYSNVSFFSAMDTKPFFYTSSTQNSTSRRLFEQQVWSLMNEALNRALSTTKCLGQQTKITQTARRMSAVSSYNIRYELYPFYNDT**********************************KATWIAIGTTIPTIL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KFHQKQHLNLLLATLRSNTTHCSSDKFSEGLRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVIWYSECLLRYSNVSFFSAMDTKPFFYTSSTQNSTSRRLFEQQVWSLMNEALNRALSTTKCLGQQTKITQTARRMSAVSSYNIRYELYPFYNDTLIASPTSAPAQAPSPVVLPLPSPGSVTSAQGKGTKATWIAIGTTIPTIL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query209 2.2.26 [Sep-21-2011]
Q9M0X5 675 Cysteine-rich receptor-li yes no 0.928 0.287 0.302 4e-19
O65468 676 Cysteine-rich receptor-li no no 0.760 0.235 0.328 8e-14
Q9SYB1341 Cysteine-rich repeat secr no no 0.612 0.375 0.296 2e-13
Q5Q0E2324 Cysteine-rich repeat secr no no 0.607 0.391 0.338 6e-13
Q8GYA4 669 Cysteine-rich receptor-li no no 0.464 0.144 0.404 1e-12
Q9CAC7305 Cysteine-rich repeat secr no no 0.425 0.291 0.404 1e-12
Q9LRK8256 Cysteine-rich repeat secr no no 0.578 0.472 0.3 2e-12
Q9SH41284 Putative cysteine-rich re no no 0.588 0.433 0.325 3e-12
Q9T0J1 665 Cysteine-rich receptor-li no no 0.411 0.129 0.379 5e-12
O65482 830 Putative cysteine-rich re no no 0.449 0.113 0.385 6e-12
>sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1 Back     alignment and function desciption
 Score = 94.7 bits (234), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 97/238 (40%), Gaps = 44/238 (18%)

Query: 9   NLLLATLRSNTTHCSSDKFSEGLRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVI 68
           N   A+L  N      +  +    +FLC GDVS E C+DCV FA +   Q CP  K  VI
Sbjct: 61  NAAYASLFDNAAAGEENDSNRVYGVFLCRGDVSAEICRDCVAFAANETLQRCPREKVAVI 120

Query: 69  WYSECLLRYSNVSFFSAMDTKPFFYTSSTQNSTSR---RLFEQQVWSLMNEALNRALSTT 125
           WY EC++RYSN S    M  +P  + ++ QN T     R  E     L++ A+  ALS+ 
Sbjct: 121 WYDECMVRYSNQSIVGQMRIRPGVFLTNKQNITENQVSRFNESLPALLIDVAVKAALSSR 180

Query: 126 KCLGQQTKITQTARRMSAVS------------------------------------SYNI 149
           K   ++   T      S V                                     S + 
Sbjct: 181 KFATEKANFTVFQTIYSLVQCTPDLTNQDCESCLRQVINYLPRCCDRSVGGRVIAPSCSF 240

Query: 150 RYELYPFYNDTLIASPTSAPAQAPSPVVLPLPSPGSVTSAQGKGTKATWIAIGTTIPT 207
           RYELYPFYN+T+ A          S V  P   P ++ S +GKG   T I     +P 
Sbjct: 241 RYELYPFYNETIAA--APMAPPPSSTVTAP---PLNIPSEKGKGKNLTVIVTAIAVPV 293





Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -
>sp|O65468|CRK8_ARATH Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2 Back     alignment and function description
>sp|Q9SYB1|CRR1_ARATH Cysteine-rich repeat secretory protein 1 OS=Arabidopsis thaliana GN=CRRSP1 PE=2 SV=3 Back     alignment and function description
>sp|Q5Q0E2|CRR9_ARATH Cysteine-rich repeat secretory protein 9 OS=Arabidopsis thaliana GN=CRRSP9 PE=2 SV=1 Back     alignment and function description
>sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3 Back     alignment and function description
>sp|Q9CAC7|CRR4_ARATH Cysteine-rich repeat secretory protein 4 OS=Arabidopsis thaliana GN=CRRSP4 PE=2 SV=2 Back     alignment and function description
>sp|Q9LRK8|CRR29_ARATH Cysteine-rich repeat secretory protein 29 OS=Arabidopsis thaliana GN=CRRSP29 PE=2 SV=1 Back     alignment and function description
>sp|Q9SH41|CRR7_ARATH Putative cysteine-rich repeat secretory protein 7 OS=Arabidopsis thaliana GN=CRRSP7 PE=3 SV=2 Back     alignment and function description
>sp|Q9T0J1|CRK26_ARATH Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1 Back     alignment and function description
>sp|O65482|CRK23_ARATH Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
359477817 670 PREDICTED: cysteine-rich receptor-like p 0.775 0.241 0.339 7e-20
147776074 815 hypothetical protein VITISV_005300 [Viti 0.775 0.198 0.330 8e-20
224100081 468 predicted protein [Populus trichocarpa] 0.569 0.254 0.390 6e-18
15234659 675 cysteine-rich receptor-like protein kina 0.928 0.287 0.302 2e-17
255555033 579 ATP binding protein, putative [Ricinus c 0.602 0.217 0.385 3e-17
357444317 673 Cysteine-rich receptor-like protein kina 0.880 0.273 0.288 2e-16
224076400 666 predicted protein [Populus trichocarpa] 0.942 0.295 0.321 2e-16
357444315 562 Cysteine-rich receptor-like protein kina 0.880 0.327 0.300 2e-16
357444313 801 Cysteine-rich receptor-like protein kina 0.880 0.229 0.288 2e-16
255555035 671 ATP binding protein, putative [Ricinus c 0.593 0.184 0.311 3e-16
>gi|359477817|ref|XP_003632027.1| PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 99/215 (46%), Gaps = 53/215 (24%)

Query: 33  LFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVIWYSECLLRYSNVSFFSAMDTKPFF 92
           LFLC  DVS   C+ C++ AT  I Q+C  +KE +IWY+EC LRYSN SFFS ++ KP  
Sbjct: 82  LFLCRPDVSKHICQSCIDAATLKIVQVCQHKKEAIIWYNECFLRYSNRSFFSNLEMKPTL 141

Query: 93  YTSSTQNSTSRRLFEQQVWSLMNEALNRALSTTK--CLGQQT--------KITQTAR--R 140
           Y  +TQN+++   F+Q++  +      +A S+     +GQ           I Q  R  R
Sbjct: 142 YMWNTQNASAPDKFDQKLGEMFQNLTAQATSSDDMYAIGQVEVSNFLNLYGIVQCTRDLR 201

Query: 141 MS--------------------------AVSSYNIRYELYPFYNDTLIASPTSAPAQAPS 174
           MS                          A S Y IRYE+YPF             A    
Sbjct: 202 MSYCRRCLDEVVGYIPNFMEGKQGGRVLAPSCY-IRYEVYPF-------------AAVED 247

Query: 175 PVVLPLPSPGSVTSAQGKGTKATWIAIGTTIPTIL 209
           PVV     P S++    KG K  WIA GT++  I+
Sbjct: 248 PVV-EAQVPSSISPRGRKGRKTKWIATGTSLSGIV 281




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147776074|emb|CAN65425.1| hypothetical protein VITISV_005300 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224100081|ref|XP_002334411.1| predicted protein [Populus trichocarpa] gi|222872074|gb|EEF09205.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15234659|ref|NP_192429.1| cysteine-rich receptor-like protein kinase 25 [Arabidopsis thaliana] gi|75335771|sp|Q9M0X5.1|CRK25_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 25; Short=Cysteine-rich RLK25; Flags: Precursor gi|7267280|emb|CAB81062.1| receptor protein kinase-like protein [Arabidopsis thaliana] gi|332657090|gb|AEE82490.1| cysteine-rich receptor-like protein kinase 25 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255555033|ref|XP_002518554.1| ATP binding protein, putative [Ricinus communis] gi|223542399|gb|EEF43941.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357444317|ref|XP_003592436.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481484|gb|AES62687.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|224076400|ref|XP_002304937.1| predicted protein [Populus trichocarpa] gi|222847901|gb|EEE85448.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357444315|ref|XP_003592435.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481483|gb|AES62686.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357444313|ref|XP_003592434.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481482|gb|AES62685.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|255555035|ref|XP_002518555.1| ATP binding protein, putative [Ricinus communis] gi|223542400|gb|EEF43942.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
TAIR|locus:2115728 675 CRK25 "cysteine-rich RLK (RECE 0.607 0.188 0.353 6.2e-20
TAIR|locus:2095642256 AT3G21990 "AT3G21990" [Arabido 0.607 0.496 0.305 2.7e-18
TAIR|locus:2095662252 AT3G22060 "AT3G22060" [Arabido 0.440 0.365 0.340 1.2e-16
TAIR|locus:2121666265 EP1 "AT4G23170" [Arabidopsis t 0.497 0.392 0.363 3e-16
TAIR|locus:2085470258 AT3G58310 "AT3G58310" [Arabido 0.425 0.344 0.337 3.9e-15
TAIR|locus:2031311284 AT1G63570 "AT1G63570" [Arabido 0.588 0.433 0.325 4.2e-15
TAIR|locus:2121676 669 CRK10 "cysteine-rich RLK (RECE 0.464 0.144 0.404 4.3e-15
TAIR|locus:2121651 676 CRK8 "cysteine-rich RLK (RECEP 0.492 0.152 0.351 5e-15
TAIR|locus:2031341324 AT1G63550 [Arabidopsis thalian 0.607 0.391 0.338 6.3e-15
TAIR|locus:2195778341 AT1G61750 "AT1G61750" [Arabido 0.612 0.375 0.296 2.9e-14
TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 205 (77.2 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
 Identities = 46/130 (35%), Positives = 69/130 (53%)

Query:     9 NLLLATLRSNTTHCSSDKFSEGLRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVI 68
             N   A+L  N      +  +    +FLC GDVS E C+DCV FA +   Q CP  K  VI
Sbjct:    61 NAAYASLFDNAAAGEENDSNRVYGVFLCRGDVSAEICRDCVAFAANETLQRCPREKVAVI 120

Query:    69 WYSECLLRYSNVSFFSAMDTKPFFYTSSTQNSTSRRL--FEQQVWSLMNE-ALNRALSTT 125
             WY EC++RYSN S    M  +P  + ++ QN T  ++  F + + +L+ + A+  ALS+ 
Sbjct:   121 WYDECMVRYSNQSIVGQMRIRPGVFLTNKQNITENQVSRFNESLPALLIDVAVKAALSSR 180

Query:   126 KCLGQQTKIT 135
             K   ++   T
Sbjct:   181 KFATEKANFT 190


GO:0004672 "protein kinase activity" evidence=IEA
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0000041 "transition metal ion transport" evidence=RCA
GO:0006826 "iron ion transport" evidence=RCA
GO:0010106 "cellular response to iron ion starvation" evidence=RCA
GO:0010167 "response to nitrate" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2095642 AT3G21990 "AT3G21990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121666 EP1 "AT4G23170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085470 AT3G58310 "AT3G58310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031311 AT1G63570 "AT1G63570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121651 CRK8 "cysteine-rich RLK (RECEPTOR-like protein kinase) 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031341 AT1G63550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195778 AT1G61750 "AT1G61750" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 1e-14
>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information
 Score = 66.3 bits (162), Expect = 1e-14
 Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 9/84 (10%)

Query: 8   LNLLLATLRSNTTHCSSDKFSEGLR---------LFLCCGDVSTESCKDCVNFATSHITQ 58
           LN LL++L SN    S   F+ G           L  C GD+S   C+ C+  A S + +
Sbjct: 23  LNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCRGDLSASDCRSCLATAVSELRR 82

Query: 59  LCPVRKETVIWYSECLLRYSNVSF 82
            CP +K   IWY  C LRY +  F
Sbjct: 83  CCPNKKGGRIWYDSCFLRYESYPF 106


This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 209
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.87
PF01657106 Stress-antifung: Salt stress response/antifungal; 98.59
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information
Probab=99.87  E-value=1.9e-22  Score=150.48  Aligned_cols=81  Identities=36%  Similarity=0.666  Sum_probs=70.0

Q ss_pred             ChHHHHHHHHHHHHHhccCCC--C-ccccccc------eEEEeecCCCChhhHHHHHHHHHHHHhhhCCCCceEEEEcce
Q 042605            2 FHQKQHLNLLLATLRSNTTHC--S-SDKFSEG------LRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVIWYSE   72 (209)
Q Consensus         2 s~y~~nl~~ll~~L~s~a~~~--~-f~~~s~G------Ygl~qCr~Dls~~~C~~Cl~~a~~~i~~~C~~~~~a~i~~~~   72 (209)
                      ++|++||+.||..|..+++..  . |++++.|      |||+||++|+++++|..||+.|+..+.+.|+.+++|+||++.
T Consensus        17 ~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~~~g~~v~~~~   96 (106)
T PF01657_consen   17 STFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPGSRGGRVWYDS   96 (106)
T ss_dssp             -THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTSBSSEEEEESS
T ss_pred             chHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCCCceEEEECCC
Confidence            569999999999999997654  3 9888654      999999999999999999999999999999999999999999


Q ss_pred             eeEEEccccc
Q 042605           73 CLLRYSNVSF   82 (209)
Q Consensus        73 C~lRYs~~~F   82 (209)
                      |+|||++++|
T Consensus        97 C~lRY~~~~F  106 (106)
T PF01657_consen   97 CFLRYENYPF  106 (106)
T ss_dssp             EEEEEESS--
T ss_pred             EEEEEECCCC
Confidence            9999999988



The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 2e-15

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query209
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.92
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.9
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 98.83
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 98.79
>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure
Probab=99.92  E-value=3.8e-25  Score=164.86  Aligned_cols=82  Identities=22%  Similarity=0.411  Sum_probs=75.4

Q ss_pred             CChHHHHHHHHHHHHHhccCCCC--ccccccc-------eEEEeecCCCChhhHHHHHHHHHHHHhhhCCCCceEEEEcc
Q 042605            1 KFHQKQHLNLLLATLRSNTTHCS--SDKFSEG-------LRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVIWYS   71 (209)
Q Consensus         1 ~s~y~~nl~~ll~~L~s~a~~~~--f~~~s~G-------Ygl~qCr~Dls~~~C~~Cl~~a~~~i~~~C~~~~~a~i~~~   71 (209)
                      +++|++||+.||+.|+++++.++  |+++..|       |||+|||+|+++++|+.||+.|+.++.+.|++++||+||++
T Consensus        18 ~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~~~~C~~~~g~~i~~~   97 (108)
T 3a2e_A           18 GSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRIFSICNNAIGARVQLV   97 (108)
T ss_dssp             TCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTHHHHTTSBSSEEEEET
T ss_pred             CChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHCCCCceEEEECC
Confidence            47899999999999999987664  6665543       99999999999999999999999999999999999999999


Q ss_pred             eeeEEEccccc
Q 042605           72 ECLLRYSNVSF   82 (209)
Q Consensus        72 ~C~lRYs~~~F   82 (209)
                      .|+||||+++|
T Consensus        98 ~C~lRY~~~~F  108 (108)
T 3a2e_A           98 DCFIQYEQRSF  108 (108)
T ss_dssp             TEEEEEESSCC
T ss_pred             CEEEEEeCCcC
Confidence            99999999988



>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00