Citrus Sinensis ID: 042605
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 209 | ||||||
| 359477817 | 670 | PREDICTED: cysteine-rich receptor-like p | 0.775 | 0.241 | 0.339 | 7e-20 | |
| 147776074 | 815 | hypothetical protein VITISV_005300 [Viti | 0.775 | 0.198 | 0.330 | 8e-20 | |
| 224100081 | 468 | predicted protein [Populus trichocarpa] | 0.569 | 0.254 | 0.390 | 6e-18 | |
| 15234659 | 675 | cysteine-rich receptor-like protein kina | 0.928 | 0.287 | 0.302 | 2e-17 | |
| 255555033 | 579 | ATP binding protein, putative [Ricinus c | 0.602 | 0.217 | 0.385 | 3e-17 | |
| 357444317 | 673 | Cysteine-rich receptor-like protein kina | 0.880 | 0.273 | 0.288 | 2e-16 | |
| 224076400 | 666 | predicted protein [Populus trichocarpa] | 0.942 | 0.295 | 0.321 | 2e-16 | |
| 357444315 | 562 | Cysteine-rich receptor-like protein kina | 0.880 | 0.327 | 0.300 | 2e-16 | |
| 357444313 | 801 | Cysteine-rich receptor-like protein kina | 0.880 | 0.229 | 0.288 | 2e-16 | |
| 255555035 | 671 | ATP binding protein, putative [Ricinus c | 0.593 | 0.184 | 0.311 | 3e-16 |
| >gi|359477817|ref|XP_003632027.1| PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 73/215 (33%), Positives = 99/215 (46%), Gaps = 53/215 (24%)
Query: 33 LFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVIWYSECLLRYSNVSFFSAMDTKPFF 92
LFLC DVS C+ C++ AT I Q+C +KE +IWY+EC LRYSN SFFS ++ KP
Sbjct: 82 LFLCRPDVSKHICQSCIDAATLKIVQVCQHKKEAIIWYNECFLRYSNRSFFSNLEMKPTL 141
Query: 93 YTSSTQNSTSRRLFEQQVWSLMNEALNRALSTTK--CLGQQT--------KITQTAR--R 140
Y +TQN+++ F+Q++ + +A S+ +GQ I Q R R
Sbjct: 142 YMWNTQNASAPDKFDQKLGEMFQNLTAQATSSDDMYAIGQVEVSNFLNLYGIVQCTRDLR 201
Query: 141 MS--------------------------AVSSYNIRYELYPFYNDTLIASPTSAPAQAPS 174
MS A S Y IRYE+YPF A
Sbjct: 202 MSYCRRCLDEVVGYIPNFMEGKQGGRVLAPSCY-IRYEVYPF-------------AAVED 247
Query: 175 PVVLPLPSPGSVTSAQGKGTKATWIAIGTTIPTIL 209
PVV P S++ KG K WIA GT++ I+
Sbjct: 248 PVV-EAQVPSSISPRGRKGRKTKWIATGTSLSGIV 281
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147776074|emb|CAN65425.1| hypothetical protein VITISV_005300 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224100081|ref|XP_002334411.1| predicted protein [Populus trichocarpa] gi|222872074|gb|EEF09205.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|15234659|ref|NP_192429.1| cysteine-rich receptor-like protein kinase 25 [Arabidopsis thaliana] gi|75335771|sp|Q9M0X5.1|CRK25_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 25; Short=Cysteine-rich RLK25; Flags: Precursor gi|7267280|emb|CAB81062.1| receptor protein kinase-like protein [Arabidopsis thaliana] gi|332657090|gb|AEE82490.1| cysteine-rich receptor-like protein kinase 25 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|255555033|ref|XP_002518554.1| ATP binding protein, putative [Ricinus communis] gi|223542399|gb|EEF43941.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|357444317|ref|XP_003592436.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481484|gb|AES62687.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224076400|ref|XP_002304937.1| predicted protein [Populus trichocarpa] gi|222847901|gb|EEE85448.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|357444315|ref|XP_003592435.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481483|gb|AES62686.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|357444313|ref|XP_003592434.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481482|gb|AES62685.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|255555035|ref|XP_002518555.1| ATP binding protein, putative [Ricinus communis] gi|223542400|gb|EEF43942.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 209 | ||||||
| TAIR|locus:2115728 | 675 | CRK25 "cysteine-rich RLK (RECE | 0.607 | 0.188 | 0.353 | 6.2e-20 | |
| TAIR|locus:2095642 | 256 | AT3G21990 "AT3G21990" [Arabido | 0.607 | 0.496 | 0.305 | 2.7e-18 | |
| TAIR|locus:2095662 | 252 | AT3G22060 "AT3G22060" [Arabido | 0.440 | 0.365 | 0.340 | 1.2e-16 | |
| TAIR|locus:2121666 | 265 | EP1 "AT4G23170" [Arabidopsis t | 0.497 | 0.392 | 0.363 | 3e-16 | |
| TAIR|locus:2085470 | 258 | AT3G58310 "AT3G58310" [Arabido | 0.425 | 0.344 | 0.337 | 3.9e-15 | |
| TAIR|locus:2031311 | 284 | AT1G63570 "AT1G63570" [Arabido | 0.588 | 0.433 | 0.325 | 4.2e-15 | |
| TAIR|locus:2121676 | 669 | CRK10 "cysteine-rich RLK (RECE | 0.464 | 0.144 | 0.404 | 4.3e-15 | |
| TAIR|locus:2121651 | 676 | CRK8 "cysteine-rich RLK (RECEP | 0.492 | 0.152 | 0.351 | 5e-15 | |
| TAIR|locus:2031341 | 324 | AT1G63550 [Arabidopsis thalian | 0.607 | 0.391 | 0.338 | 6.3e-15 | |
| TAIR|locus:2195778 | 341 | AT1G61750 "AT1G61750" [Arabido | 0.612 | 0.375 | 0.296 | 2.9e-14 |
| TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 205 (77.2 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 46/130 (35%), Positives = 69/130 (53%)
Query: 9 NLLLATLRSNTTHCSSDKFSEGLRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVI 68
N A+L N + + +FLC GDVS E C+DCV FA + Q CP K VI
Sbjct: 61 NAAYASLFDNAAAGEENDSNRVYGVFLCRGDVSAEICRDCVAFAANETLQRCPREKVAVI 120
Query: 69 WYSECLLRYSNVSFFSAMDTKPFFYTSSTQNSTSRRL--FEQQVWSLMNE-ALNRALSTT 125
WY EC++RYSN S M +P + ++ QN T ++ F + + +L+ + A+ ALS+
Sbjct: 121 WYDECMVRYSNQSIVGQMRIRPGVFLTNKQNITENQVSRFNESLPALLIDVAVKAALSSR 180
Query: 126 KCLGQQTKIT 135
K ++ T
Sbjct: 181 KFATEKANFT 190
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| TAIR|locus:2095642 AT3G21990 "AT3G21990" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121666 EP1 "AT4G23170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2085470 AT3G58310 "AT3G58310" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031311 AT1G63570 "AT1G63570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121651 CRK8 "cysteine-rich RLK (RECEPTOR-like protein kinase) 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031341 AT1G63550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2195778 AT1G61750 "AT1G61750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 209 | |||
| pfam01657 | 106 | pfam01657, Stress-antifung, Salt stress response/a | 1e-14 |
| >gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal | Back alignment and domain information |
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Score = 66.3 bits (162), Expect = 1e-14
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 8 LNLLLATLRSNTTHCSSDKFSEGLR---------LFLCCGDVSTESCKDCVNFATSHITQ 58
LN LL++L SN S F+ G L C GD+S C+ C+ A S + +
Sbjct: 23 LNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCRGDLSASDCRSCLATAVSELRR 82
Query: 59 LCPVRKETVIWYSECLLRYSNVSF 82
CP +K IWY C LRY + F
Sbjct: 83 CCPNKKGGRIWYDSCFLRYESYPF 106
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This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 209 | |||
| PF01657 | 106 | Stress-antifung: Salt stress response/antifungal; | 99.87 | |
| PF01657 | 106 | Stress-antifung: Salt stress response/antifungal; | 98.59 |
| >PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function | Back alignment and domain information |
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Probab=99.87 E-value=1.9e-22 Score=150.48 Aligned_cols=81 Identities=36% Similarity=0.666 Sum_probs=70.0
Q ss_pred ChHHHHHHHHHHHHHhccCCC--C-ccccccc------eEEEeecCCCChhhHHHHHHHHHHHHhhhCCCCceEEEEcce
Q 042605 2 FHQKQHLNLLLATLRSNTTHC--S-SDKFSEG------LRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVIWYSE 72 (209)
Q Consensus 2 s~y~~nl~~ll~~L~s~a~~~--~-f~~~s~G------Ygl~qCr~Dls~~~C~~Cl~~a~~~i~~~C~~~~~a~i~~~~ 72 (209)
++|++||+.||..|..+++.. . |++++.| |||+||++|+++++|..||+.|+..+.+.|+.+++|+||++.
T Consensus 17 ~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~~~g~~v~~~~ 96 (106)
T PF01657_consen 17 STFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPGSRGGRVWYDS 96 (106)
T ss_dssp -THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTSBSSEEEEESS
T ss_pred chHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCCCceEEEECCC
Confidence 569999999999999997654 3 9888654 999999999999999999999999999999999999999999
Q ss_pred eeEEEccccc
Q 042605 73 CLLRYSNVSF 82 (209)
Q Consensus 73 C~lRYs~~~F 82 (209)
|+|||++++|
T Consensus 97 C~lRY~~~~F 106 (106)
T PF01657_consen 97 CFLRYENYPF 106 (106)
T ss_dssp EEEEEESS--
T ss_pred EEEEEECCCC
Confidence 9999999988
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The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D. |
| >PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 209 | |||
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 2e-15 |
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 209 | |||
| 3a2e_A | 108 | Ginkbilobin-2; domain 26 unknown function (DUF26), | 99.92 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 99.9 | |
| 3a2e_A | 108 | Ginkbilobin-2; domain 26 unknown function (DUF26), | 98.83 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 98.79 |
| >3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} | Back alignment and structure |
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Probab=99.92 E-value=3.8e-25 Score=164.86 Aligned_cols=82 Identities=22% Similarity=0.411 Sum_probs=75.4
Q ss_pred CChHHHHHHHHHHHHHhccCCCC--ccccccc-------eEEEeecCCCChhhHHHHHHHHHHHHhhhCCCCceEEEEcc
Q 042605 1 KFHQKQHLNLLLATLRSNTTHCS--SDKFSEG-------LRLFLCCGDVSTESCKDCVNFATSHITQLCPVRKETVIWYS 71 (209)
Q Consensus 1 ~s~y~~nl~~ll~~L~s~a~~~~--f~~~s~G-------Ygl~qCr~Dls~~~C~~Cl~~a~~~i~~~C~~~~~a~i~~~ 71 (209)
+++|++||+.||+.|+++++.++ |+++..| |||+|||+|+++++|+.||+.|+.++.+.|++++||+||++
T Consensus 18 ~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~~~~C~~~~g~~i~~~ 97 (108)
T 3a2e_A 18 GSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRIFSICNNAIGARVQLV 97 (108)
T ss_dssp TCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTHHHHTTSBSSEEEEET
T ss_pred CChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHCCCCceEEEECC
Confidence 47899999999999999987664 6665543 99999999999999999999999999999999999999999
Q ss_pred eeeEEEccccc
Q 042605 72 ECLLRYSNVSF 82 (209)
Q Consensus 72 ~C~lRYs~~~F 82 (209)
.|+||||+++|
T Consensus 98 ~C~lRY~~~~F 108 (108)
T 3a2e_A 98 DCFIQYEQRSF 108 (108)
T ss_dssp TEEEEEESSCC
T ss_pred CEEEEEeCCcC
Confidence 99999999988
|
| >3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} | Back alignment and structure |
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Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00