Citrus Sinensis ID: 042614

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
Protein Sequence
FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRKYPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEYRLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELRHMNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGDKSCLAAHDEDSLFNPLKRIKLMEKNQQDDCVPPSKKIKEGYVHKEEEIILSVSNESTGETNIYETDHSEGNNFSHDHHQWSHTMQYHQELNNLVFTGK
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccEEEEEEccEEcccccccccccccEEEEcccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHccccccccEEEEEEEcccccccccHHccccccEEEEEcccccccccccccccccccccEEcccccccccccccccEEEEEEEEEEEcccccccccccEEEEEEEcccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccccccccccccHHccccccccccccHHcccHHHHHccccccccccccccccccccccEEEEEcccccccHccccccccccccccccccccccccccccHHcEEEcccc
Coil and Loop (DISEMBL)
FHPSDEELIVHYLTNkvasiplpasiiaeidlykynpwdlprkalfgeeewyfftprdrkypngarpnraaasgfwkatgtdkpiltsfgtksigVKKALVFyegrppkgyktdwimheyrlpdtiawtpnrkgsmrlddWVLCRVRqnsinsrkawddrngysyeaapgfISKVNELRhmnntnpnvEMVKSYLyndcsmlpyifasrdftsccidtdsnisfqggdksclaahdedslfnpLKRIKLMEknqqddcvppskkikegyvhkeEEIILSVsnestgetniyetdhsegnnfshdhhqwsHTMQYHQELNNLVFTGK
Flexible Loop (DISEMBL)
FHPSDEELIVHYLtnkvasiplPASIIAEIDLYKYNPWDLPRKALFGEEEWYfftprdrkypngARPNRAAAsgfwkatgtdkpiltsfgtksigvkkALVFYEGRPPKGYKTDWIMHEYRLpdtiawtpnrkgsmrlddWVLCRVRqnsinsrkawddrngySYEAAPGFISKVNELRHMNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGDKSCLAAHDEDSLFNPLKRIKLMeknqqddcvppskkikegyvhKEEEIILSVSNESTGETNIYETDHSEGNNFSHDHHQWSHTMQYHQELNNLVFTGK
Low Complexity Region (SEG)
FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRKYPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEYRLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELRHMNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGDKSCLAAHDEDSLFNPLKRIKLMEKNQQDDCVPPSKKIKEGYVHKEEEIILSVSNESTGETNIYETDHSEGNNFSHDHHQWSHTMQYHQELNNLVFTGK
Disordered region (IsUnstruct)
*******LIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRKY********AAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEYRLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELRHMNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGDKSCLAAHD**SLFNPL*******************************II************************************Y************
Disordered Region (DISOPRED)
FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRKYPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEYRLP****************DWVLCRVRQ*************************************************************************************************************************************************************HQWSHTMQYHQELNNL*****
Disordered Region (DISEMBL)
FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRKYPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEYRLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELRHMNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGDKSCLAAHDEDSLFNPLKRIKLMEK********PSKKIKEGYVHKEEEIILSVSNESTGETNIYETDHSEGNNFSHDHHQWSHTMQYHQELNNLVFTGK
Disordered Region (DISPRO)
FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRKYPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEYRLPDTIA******GSMRLDDWVLCRVRQNSI*********************************************NDCSMLPYIFASRDFTSCCIDTDSNISFQGGDKSCLAAHDEDSLFNPLKRIKLMEKNQQDDCVPPSKKIKEGYVHKEEEIILSVSNE***E*NI*******GNNFSHDHHQWSHTMQYHQELNNLVFT**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRKYPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEYRLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELRHMNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGDKSCLAAHDEDSLFNPLKRIKLMEKNQQDDCVPPSKKIKEGYVHKEEEIILSVSNESTGETNIYETDHSEGNNFSHDHHQWSHTMQYHQELNNLVFTGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	326	2.2.26 [Sep-21-2011]
Q8H4S4	425	NAC transcription factor	yes	no	0.447	0.343	0.668	1e-60
A0SPJ6	396	NAC transcription factor	N/A	no	0.506	0.416	0.627	2e-60
A0SPJ9	402	NAC transcription factor	N/A	no	0.506	0.410	0.615	4e-60
A2YMR0	425	NAC transcription factor	N/A	no	0.447	0.343	0.668	6e-60
Q8GY42	323	NAC transcription factor	no	no	0.469	0.473	0.679	1e-59
D2SMN4	406	NAC transcription factor	N/A	no	0.487	0.391	0.603	8e-59
A0SPJ3	405	NAC transcription factor	N/A	no	0.484	0.390	0.617	1e-58
Q52QH4	318	NAC domain-containing pro	no	no	0.447	0.459	0.671	5e-58
A0SPJ8	406	NAC transcription factor	N/A	no	0.487	0.391	0.597	5e-58
O49255	268	NAC transcription factor	no	no	0.607	0.738	0.549	7e-58

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  233 bits (595), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/163 (66%), Positives = 128/163 (78%), Gaps = 17/163 (10%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHP+DEEL+VHYL  K AS+PLP +IIAE+DLYK++PWDLP KA FGE+EWYFF+PRDRK
Sbjct: 35  FHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLPEKANFGEQEWYFFSPRDRK 94

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKS-IGVKKALVFYEGRPPKGYKTDWIMHE 119
           YPNGARPNRAA SG+WKATGTDKPI++S  T+  +GVKKALVFY G+PPKG KT+WIMHE
Sbjct: 95  YPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPPKGVKTNWIMHE 154

Query: 120 YRLPDTIA--------------WTPNRKG--SMRLDDWVLCRV 146
           YRL DT +               T   KG  S+RLDDWVLCR+
Sbjct: 155 YRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLCRI 197

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  232 bits (592), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 111/177 (62%), Positives = 132/177 (74%), Gaps = 12/177 (6%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHP+DEEL+VHYL  K A +PLP +II E+DLYK++PW+LP KA FGE+EWYFF+PRDRK
Sbjct: 34  FHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKATFGEQEWYFFSPRDRK 93

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTS-FGTKSIGVKKALVFYEGRPPKGYKTDWIMHE 119
           YPNGARPNRAA SG+WKATGTDKPIL S  G + +GVKKALVFY G+PPKG KT+WIMHE
Sbjct: 94  YPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYRGKPPKGLKTNWIMHE 153

Query: 120 YRLPD-----TIAWTP-----NRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYE 166
           YRL D     T +  P     +R  S+RLDDWVLCR+ +  IN   A D +     E
Sbjct: 154 YRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRIYKK-INKAAAGDQQRSMECE 209

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score =  231 bits (590), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 109/177 (61%), Positives = 130/177 (73%), Gaps = 12/177 (6%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHP+DEEL+VHYL  K A +PLP +IIAE+DLYK++PW+LP KA FGE+EWYFF+PRDRK
Sbjct: 34  FHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQEWYFFSPRDRK 93

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTS-FGTKSIGVKKALVFYEGRPPKGYKTDWIMHE 119
           YPNGARPNRAA SG+WKATGTDKPIL S  G + +GVK ALVFY G+PPKG KT+WIMHE
Sbjct: 94  YPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKXALVFYRGKPPKGLKTNWIMHE 153

Query: 120 YRLPDTIAWTP----------NRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYE 166
           YRL D  +             +R  S+RLDDWVLCR+ +  IN   A D +     E
Sbjct: 154 YRLTDASSSAATSRPPPVTGGSRAASLRLDDWVLCRIYKK-INKAAAADQQRSMECE 209

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  231 bits (589), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 109/163 (66%), Positives = 128/163 (78%), Gaps = 17/163 (10%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHP+DEEL+VHYL  K AS+PLP +IIAE+DLYK++PW+LP KA FGE+EWYFF+PRDRK
Sbjct: 35  FHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANFGEQEWYFFSPRDRK 94

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTK-SIGVKKALVFYEGRPPKGYKTDWIMHE 119
           YPNGARPNRAA SG+WKATGTDKPI+ S  T+  +GVKKALVFY G+PPKG KT+WIMHE
Sbjct: 95  YPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPPKGVKTNWIMHE 154

Query: 120 YRLPDT------IAWT-----PNRKG-----SMRLDDWVLCRV 146
           YRL DT      +A T     P   G     S+RLDDWVLCR+
Sbjct: 155 YRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLCRI 197

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score =  230 bits (587), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 110/162 (67%), Positives = 127/162 (78%), Gaps = 9/162 (5%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHP+DEEL+VHYL  K  S+PLP SIIAEIDLYK++PW+LP KA FGE EWYFF+PRDRK
Sbjct: 22  FHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYFFSPRDRK 81

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG RPNRAA SG+WKATGTDKPI T   +  +GVKKALVFY G+PPKG KTDWIMHEY
Sbjct: 82  YPNGVRPNRAATSGYWKATGTDKPIFTC-NSHKVGVKKALVFYGGKPPKGIKTDWIMHEY 140

Query: 121 RLPD----TIAWTPN----RKGSMRLDDWVLCRVRQNSINSR 154
           RL D    T A  P+    RK S+RLDDWVLCR+ + + + R
Sbjct: 141 RLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKNSSQR 182

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score =  227 bits (579), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 105/174 (60%), Positives = 125/174 (71%), Gaps = 15/174 (8%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHP+DEEL+VHYL  K A  PLP +IIAE+DLYK++PW+LP KA FGE EWYFF+PRDRK
Sbjct: 41  FHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYFFSPRDRK 100

Query: 61  YPNGARPNRAAASGFWKATGTDKPIL---TSFGTKSIGVKKALVFYEGRPPKGYKTDWIM 117
           YPNGARPNRAA SG+WKATGTDKPIL   T  G + +GVKKALVFY G+PP+G KT+WIM
Sbjct: 101 YPNGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRGLKTNWIM 160

Query: 118 HEYRL------------PDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDD 159
           HEYRL            P  +        S+RLDDWVLCR+ + +  +  A  D
Sbjct: 161 HEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAAAAVGD 214

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|A0SPJ3|NAMA1_TRIDB NAC transcription factor NAM-A1 OS=Triticum durum GN=NAM-A1 PE=2 SV=1

 Score =  227 bits (578), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 110/178 (61%), Positives = 130/178 (73%), Gaps = 20/178 (11%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHP+DEEL+VHYL  K A +PLP +IIAE+DLYK++PW+LP KA FGE+EWYFF+PRDRK
Sbjct: 39  FHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQEWYFFSPRDRK 98

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGT------KSIGVKKALVFYEGRPPKGYKTD 114
           YPNGARPNRAA SG+WKATGTDKPIL S GT      + +GVKKALVFY G+PPKG KT+
Sbjct: 99  YPNGARPNRAATSGYWKATGTDKPILAS-GTGCGLVREKLGVKKALVFYRGKPPKGLKTN 157

Query: 115 WIMHEYRLPDTIAWTPNRK------------GSMRLDDWVLCRVRQNSINSRKAWDDR 160
           WIMHEYRL D    T   +             S+RLDDWVLCR+ +  IN   A D +
Sbjct: 158 WIMHEYRLTDVSGSTTTSRPPPPVTGGSRAAASLRLDDWVLCRIYKK-INKAAAGDQQ 214

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-B2) and one extra pseudogene (NAM-B1) (PubMed:17124321).

Triticum durum (taxid: 4567)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  224 bits (572), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 98/146 (67%), Positives = 116/146 (79%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHP+DEEL+VHYL  KVA  PLP  IIAE+DLYK +PWDLP KALFG +EWYFFTPRDRK
Sbjct: 27  FHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRK 86

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG+RPNRAA  G+WKATG DKP+      +++G+KKALVFY G+ P+G KTDWIMHEY
Sbjct: 87  YPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEY 146

Query: 121 RLPDTIAWTPNRKGSMRLDDWVLCRV 146
           RL D       +KGS +LD+WVLCR+
Sbjct: 147 RLADADRAPGGKKGSQKLDEWVLCRL 172

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score =  224 bits (572), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 104/174 (59%), Positives = 124/174 (71%), Gaps = 15/174 (8%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHP+DEEL+VHYL  K A  PLP +IIAE+DLYK++PW+LP KA FGE EWYFF+PRDRK
Sbjct: 41  FHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYFFSPRDRK 100

Query: 61  YPNGARPNRAAASGFWKATGTDKPIL---TSFGTKSIGVKKALVFYEGRPPKGYKTDWIM 117
           Y NGARPNRAA SG+WKATGTDKPIL   T  G + +GVKKALVFY G+PP+G KT+WIM
Sbjct: 101 YANGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRGLKTNWIM 160

Query: 118 HEYRL------------PDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDD 159
           HEYRL            P  +        S+RLDDWVLCR+ + +  +  A  D
Sbjct: 161 HEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAAAAVGD 214

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score =  224 bits (571), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 111/202 (54%), Positives = 140/202 (69%), Gaps = 4/202 (1%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHP+DEELIV+YL N+  S P P SII E+D+YK++PW LP K  FGE EWYFF+PR+RK
Sbjct: 15  FHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEWYFFSPRERK 74

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG RPNRAA SG+WKATGTDK I +  G+ ++GVKKALVFY+GRPPKG KTDWIMHEY
Sbjct: 75  YPNGVRPNRAAVSGYWKATGTDKAIHS--GSSNVGVKKALVFYKGRPPKGIKTDWIMHEY 132

Query: 121 RLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELRH 180
           RL D+   +  R GSMRLD+WVLCR+ +    + K  +++ G+  E      +KV     
Sbjct: 133 RLHDSRKASTKRNGSMRLDEWVLCRIYKKR-GASKLLNEQEGFMDEVLMEDETKVVVNEA 191

Query: 181 MNNTNPNVEMVKSY-LYNDCSM 201
              T   + M+ S  L   CS+
Sbjct: 192 ERRTEEEIMMMTSMKLPRTCSL 213

May function in the transition between active cell division and cell expansion.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
224069402	337	NAC domain protein, IPR003441 [Populus t	0.960	0.928	0.611	1e-102
225439932	342	PREDICTED: uncharacterized protein LOC10	0.935	0.891	0.595	2e-99
297741580	349	unnamed protein product [Vitis vinifera]	0.935	0.873	0.595	2e-99
255557034	308	transcription factor, putative [Ricinus	0.822	0.870	0.580	2e-86
357510635	328	NAC domain transcription factor [Medicag	0.920	0.914	0.543	2e-84
356570746	335	PREDICTED: uncharacterized protein LOC10	0.914	0.889	0.529	4e-84
224140181	313	NAC domain protein, IPR003441 [Populus t	0.904	0.942	0.546	5e-81
359478689	390	PREDICTED: uncharacterized protein LOC10	0.849	0.710	0.498	5e-74
297746236	376	unnamed protein product [Vitis vinifera]	0.849	0.736	0.498	5e-74
356547188	349	PREDICTED: NAC domain-containing protein	0.947	0.885	0.479	3e-73

>gi|224069402|ref|XP_002326347.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222833540|gb|EEE72017.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/327 (61%), Positives = 232/327 (70%), Gaps = 14/327 (4%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHPSDEELIVHYL N+V+S PLPASIIAEIDLYKYNPW+LP+KALFG +EWYFFTPRDRK
Sbjct: 17  FHPSDEELIVHYLKNRVSSSPLPASIIAEIDLYKYNPWELPKKALFGVDEWYFFTPRDRK 76

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNGARPNRAAASG+WKATGTDK I  SFGT  IGVKK LVFYEGRPPKG KTDW MHEY
Sbjct: 77  YPNGARPNRAAASGYWKATGTDKSIFNSFGTAKIGVKKTLVFYEGRPPKGLKTDWNMHEY 136

Query: 121 RLPDTIAW-TPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAP-GFISKVNEL 178
           RL D + W    RKGSMRLDDWVLCRVRQ +   R  W D+N  S  +AP G   KVNEL
Sbjct: 137 RLLDAMIWNNSKRKGSMRLDDWVLCRVRQKNSIPRNTWQDQNIPSCASAPTGLFPKVNEL 196

Query: 179 RHMNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGDKSCLAAHDED 238
           + M N NPN EMV +Y Y+DC MLP IF+ ++F S   +  S+I+F   DKSC + H+  
Sbjct: 197 QQM-NINPNTEMVTNYFYDDCPMLPCIFSPQNFPS--TERASSINFLSSDKSCTSFHN-- 251

Query: 239 SLFNPLKRIKLMEKNQQDDCVPPSKKIKEGYVHKEEEIILSVSNESTGETNIYETDHSEG 298
            L N LKR       Q+ +C PP K ++       EE ++S+ N+ T E N   TD SE 
Sbjct: 252 -LLNLLKRKPAETNQQRGNCFPPGKMLRTK--ADIEEDVVSIRNDGTDE-NFSGTDQSES 307

Query: 299 NNFSHDHHQWSHTMQYHQELNNLVFTG 325
            NFS +  QW+  MQY QE N+L FTG
Sbjct: 308 GNFSTE--QWNSPMQY-QECNHLTFTG 331

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439932|ref|XP_002275457.1| PREDICTED: uncharacterized protein LOC100248298 [Vitis vinifera]

 Score =  369 bits (946), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 203/341 (59%), Positives = 240/341 (70%), Gaps = 36/341 (10%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHPSDEELI+HYL NK  S P+PASIIAE+DLYKYNPW+LP KALFG++EWYFFTPRDRK
Sbjct: 19  FHPSDEELIIHYLRNKATSSPIPASIIAEVDLYKYNPWELPTKALFGQDEWYFFTPRDRK 78

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG RPNRAAASG+WKATGTDKPILTS GT+SIGVKKALVFY+GRPPKG KTDWIMHEY
Sbjct: 79  YPNGVRPNRAAASGYWKATGTDKPILTSCGTRSIGVKKALVFYKGRPPKGVKTDWIMHEY 138

Query: 121 RLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELRH 180
           RL D++  T   KGSMRLDDWVLCRVRQ S   R  W+DRNG S E A  +   V++  +
Sbjct: 139 RLLDSMFRTLKHKGSMRLDDWVLCRVRQKSSIPRNIWEDRNGPSSEPA-SYSPAVDKACN 197

Query: 181 MNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGDK-----SCLAAH 235
           M  TN NVEM+KSYLYNDC +LPYIFAS+DF++        ISF+G +K     S  + +
Sbjct: 198 M-TTNSNVEMIKSYLYNDCPLLPYIFASQDFSA--------ISFEGRNKGKFYSSVCSEN 248

Query: 236 DEDS------------LFNPLKRIKLMEKNQQDDCVPPSKKIKEGYVHKEEEIILSVSNE 283
           + D             LFNP KR K +E NQ +  +PPSKK+       +++ +LSV   
Sbjct: 249 NSDQKNLLVSVSSSNSLFNPQKR-KPIEGNQYEGFLPPSKKLNNR--DDKDKFLLSV--- 302

Query: 284 STGETNIYETDHSEGNNFSHDHHQWSHTMQYHQELNNLVFT 324
            + E N   T+ SE NNF+ D  QW    QY QELN L FT
Sbjct: 303 DSTEMNCSRTEESEDNNFTAD--QWDSITQY-QELNYLAFT 340

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741580|emb|CBI32712.3| unnamed protein product [Vitis vinifera]

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 203/341 (59%), Positives = 240/341 (70%), Gaps = 36/341 (10%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHPSDEELI+HYL NK  S P+PASIIAE+DLYKYNPW+LP KALFG++EWYFFTPRDRK
Sbjct: 19  FHPSDEELIIHYLRNKATSSPIPASIIAEVDLYKYNPWELPTKALFGQDEWYFFTPRDRK 78

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG RPNRAAASG+WKATGTDKPILTS GT+SIGVKKALVFY+GRPPKG KTDWIMHEY
Sbjct: 79  YPNGVRPNRAAASGYWKATGTDKPILTSCGTRSIGVKKALVFYKGRPPKGVKTDWIMHEY 138

Query: 121 RLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELRH 180
           RL D++  T   KGSMRLDDWVLCRVRQ S   R  W+DRNG S E A  +   V++  +
Sbjct: 139 RLLDSMFRTLKHKGSMRLDDWVLCRVRQKSSIPRNIWEDRNGPSSEPA-SYSPAVDKACN 197

Query: 181 MNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGDK-----SCLAAH 235
           M  TN NVEM+KSYLYNDC +LPYIFAS+DF++        ISF+G +K     S  + +
Sbjct: 198 M-TTNSNVEMIKSYLYNDCPLLPYIFASQDFSA--------ISFEGRNKGKFYSSVCSEN 248

Query: 236 DEDS------------LFNPLKRIKLMEKNQQDDCVPPSKKIKEGYVHKEEEIILSVSNE 283
           + D             LFNP KR K +E NQ +  +PPSKK+       +++ +LSV   
Sbjct: 249 NSDQKNLLVSVSSSNSLFNPQKR-KPIEGNQYEGFLPPSKKLNNR--DDKDKFLLSV--- 302

Query: 284 STGETNIYETDHSEGNNFSHDHHQWSHTMQYHQELNNLVFT 324
            + E N   T+ SE NNF+ D  QW    QY QELN L FT
Sbjct: 303 DSTEMNCSRTEESEDNNFTAD--QWDSITQY-QELNYLAFT 340

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557034|ref|XP_002519550.1| transcription factor, putative [Ricinus communis] gi|223541413|gb|EEF42964.1| transcription factor, putative [Ricinus communis]

 Score =  325 bits (833), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 173/298 (58%), Positives = 208/298 (69%), Gaps = 30/298 (10%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHPSDEELIV+YL NKV S PLPAS++A++DLYKYNPW+LP+KA FGE+EWYFFTPRDRK
Sbjct: 17  FHPSDEELIVYYLKNKVTSNPLPASVVADLDLYKYNPWELPKKASFGEDEWYFFTPRDRK 76

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNGARPNRA ASG+WKATGTDKPILTS GT SIGVKKALVFY GRPPKG KTDWIMHEY
Sbjct: 77  YPNGARPNRATASGYWKATGTDKPILTSCGTTSIGVKKALVFYGGRPPKGIKTDWIMHEY 136

Query: 121 RLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSY--EAAPGFISKVNEL 178
           RL D+++  P  K SMRLDDWVLCRVRQ +   R  W+D N  SY    A G+  KVN+ 
Sbjct: 137 RLLDSLSLNPKNKASMRLDDWVLCRVRQKNSFPRSTWEDPNDPSYYEPLAAGYFPKVND- 195

Query: 179 RHMNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTD------------SNISFQG 226
                  PN EMVK+YLYNDC MLPYIFAS+DF+  CID              +++ ++G
Sbjct: 196 -------PNTEMVKNYLYNDCPMLPYIFASQDFS--CIDEASSSSFQSSDKSFASLLYEG 246

Query: 227 GDKSCLAAHDEDSLFNPLKRIKLMEKNQQDDC---VPPSKK-IKEGYVHKEEEIILSV 280
                       + FN L     +++NQ+  C   +PPSKK IK     +E+  I+++
Sbjct: 247 DSVDKDIPQFSVTSFNNLLINNPLKRNQK--CYINIPPSKKIIKRNPDEREDTAIITI 302

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357510635|ref|XP_003625606.1| NAC domain transcription factor [Medicago truncatula] gi|355500621|gb|AES81824.1| NAC domain transcription factor [Medicago truncatula]

 Score =  318 bits (816), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 182/335 (54%), Positives = 210/335 (62%), Gaps = 35/335 (10%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHPSDEELIVHYL NKV S PLPAS IAEI+LYKYNPW+LP KALFGEEEWYFFTPRDRK
Sbjct: 17  FHPSDEELIVHYLRNKVTSSPLPASFIAEINLYKYNPWELPSKALFGEEEWYFFTPRDRK 76

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YP G RPNRAA  G+WKATGTDKPILTS G KSIGVKKALVFY+GRPPKG KT+WIMHEY
Sbjct: 77  YPKGLRPNRAAGVGYWKATGTDKPILTSCGLKSIGVKKALVFYKGRPPKGSKTEWIMHEY 136

Query: 121 RLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELRH 180
           RL D++    N  GSMRLD+WVLCRVRQ   + R +W+D N  SYE+   F         
Sbjct: 137 RLHDSMISNSNHSGSMRLDEWVLCRVRQKMGSPRSSWEDSNELSYESTSQF--------Q 188

Query: 181 MNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCID-TDSNISFQGG----DKSCLAAH 235
               N N E VK+Y+ N+  MLPYI AS+      I  T  N++ Q      D + + A 
Sbjct: 189 QMTVNSNPEPVKNYVQNEYPMLPYILASKSALPNSIGMTSDNVNIQASSYDDDLNVIGAQ 248

Query: 236 ----DEDSLFN-PLKRIKLMEKNQQDDCVPPSKKIKEGYVHKEEEIILSVSNESTGETNI 290
                 + LFN PLKR K +E N   D      K              S+S E  G    
Sbjct: 249 FLSATTEGLFNKPLKR-KAVEDNVAMDFYDVLNK--------------SLSREVDGRKQS 293

Query: 291 YETDHSEGNNFSHDHHQWSHTMQYHQELNNLVFTG 325
            E D S+G NF +   QW+  +Q  QELN+L FTG
Sbjct: 294 LEKDLSKGYNF-YSFDQWTSIIQ-PQELNSLTFTG 326

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356570746|ref|XP_003553546.1| PREDICTED: uncharacterized protein LOC100788799 [Glycine max]

 Score =  317 bits (813), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 181/342 (52%), Positives = 219/342 (64%), Gaps = 44/342 (12%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHPSDEELIVHYL NKV S PLPAS IAEIDLYKYNPW+LP KALFGE+EWYFFTPRDRK
Sbjct: 17  FHPSDEELIVHYLRNKVTSSPLPASFIAEIDLYKYNPWELPSKALFGEDEWYFFTPRDRK 76

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG RPNRAAASG+WKATGTDKPI TS G KSI VKKALVFY+GRPPKG KTDWIMHEY
Sbjct: 77  YPNGVRPNRAAASGYWKATGTDKPIFTSCGMKSIAVKKALVFYKGRPPKGSKTDWIMHEY 136

Query: 121 RLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELRH 180
           RL D+      + G+MRLD+WVLCRVRQ +I+ R  W+D N   YE    +  +++E   
Sbjct: 137 RLHDSTISNSKQGGTMRLDEWVLCRVRQKTISPRSLWEDSNEPIYEPT-SYFQQMSE--- 192

Query: 181 MNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGD--KSCLAAHD-- 236
              +NP  E VK+ L+++  MLPYI AS+      ID  S+ SF   D  K+  + HD  
Sbjct: 193 --KSNP--EPVKNSLHSEYPMLPYILASKSALPNSIDMASSSSFGCNDDVKAYASLHDGN 248

Query: 237 --------------EDSLFNPLKRIKLMEKNQQDDCVPPSKKIKEGYVHKEEEIILSVSN 282
                          + LFNPLKR + +E+N+ D   P +KK+ E               
Sbjct: 249 LNNIIIGAQFIAPVAEDLFNPLKR-RNIEENELDLYAPLNKKLNE--------------- 292

Query: 283 ESTGETNIYETDHSEGNNFSHDHHQWSHTMQYHQELNNLVFT 324
           E      I E D ++G NF ++  QW+  +Q  QE N+L FT
Sbjct: 293 EVDVGKQILEKDVNKGYNF-NNFDQWTSIIQ-PQEFNSLAFT 332

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140181|ref|XP_002323463.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222868093|gb|EEF05224.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 177/324 (54%), Positives = 210/324 (64%), Gaps = 29/324 (8%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHPSDEELIVH L NK+ S PLPASIIAEIDLYKYNPW+LPR                 K
Sbjct: 17  FHPSDEELIVHNLKNKITSNPLPASIIAEIDLYKYNPWELPRIG---------------K 61

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNGARPNRAAASG+WKATGTDK I+ S GT  IGVKKALVFY+GRPPKG KT WIMHEY
Sbjct: 62  YPNGARPNRAAASGYWKATGTDKSIINSCGTTKIGVKKALVFYKGRPPKGVKTGWIMHEY 121

Query: 121 RLPDTIAW-TPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELR 179
           RL D  AW    RKGSMRLDDWVLC+VRQ +   R  W+D+N  S  A  GF   VN+L 
Sbjct: 122 RLLD--AWNNSKRKGSMRLDDWVLCQVRQKNSIPRSTWEDQNVPS-SAPTGFFPGVNDLL 178

Query: 180 HMNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGDKSCLAAHDEDS 239
              N NPN+EM+++Y YNDC MLPYIF+S+DF S   +  S+I+F   DKS  +  +   
Sbjct: 179 D-TNINPNIEMIRNYFYNDCPMLPYIFSSQDFPS--TERVSSINFPSTDKSSTSLGN--- 232

Query: 240 LFNPLKRIKLMEKNQQDDCVPPSKKIKEGYVHKEEEIILSVSNESTGETNIYETDHSEGN 299
           L N LKR  +    Q+++C P SKK++      EEE +LS+ N+ T E        SE  
Sbjct: 233 LLNSLKRKHVERDQQRENCFPRSKKLRTK-ADMEEEGVLSIRNDGTDENLCGMPGQSESG 291

Query: 300 NFSHDHHQWSHTMQYHQELNNLVF 323
            FS    QW+  +QY QE N+L  
Sbjct: 292 CFS--PVQWNPLVQY-QEFNHLTL 312

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478689|ref|XP_002282243.2| PREDICTED: uncharacterized protein LOC100253566 [Vitis vinifera]

 Score =  284 bits (726), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 157/315 (49%), Positives = 200/315 (63%), Gaps = 38/315 (12%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHPSDEELIVHYL  KV S PLPAS+IAEIDLYKYNPW+LP+KALFGEEEWYFF+PRDRK
Sbjct: 17  FHPSDEELIVHYLQKKVTSHPLPASVIAEIDLYKYNPWELPKKALFGEEEWYFFSPRDRK 76

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG RPNRAAASGFWKATGTDKPILTS G+KSIGVKKALVFY GRPP+G KT+WIM+EY
Sbjct: 77  YPNGVRPNRAAASGFWKATGTDKPILTSCGSKSIGVKKALVFYIGRPPRGVKTEWIMNEY 136

Query: 121 RLPDTIAWTPNR-KGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELR 179
           RL +T+    +R KGSMRLDDWVLCRVR      +   + ++  S E    ++ K+ E +
Sbjct: 137 RLLNTMNRPGSRSKGSMRLDDWVLCRVRHKGNMPKNTCEGQDSPSTELI-SYLPKIEEQQ 195

Query: 180 HMNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGDKSCL--AAHDE 237
            M+    + +M   YLYN C ++  I A         +T SN++F+G + S    + H++
Sbjct: 196 PMHTK--HNDMDTGYLYNHCELIASILAGHPLPHN--ETISNVTFKGSNNSNSHGSVHED 251

Query: 238 --------------DSLFNPLK--------------RIKLMEKNQQDDCVPPSKKIKEGY 269
                         DS FNPL                 K++  N +D+ + P K     +
Sbjct: 252 GSDKVNLPITVSSFDSFFNPLNGNSTEKHRYENPPPSQKMLTSNNEDESLSPHKTSTNNH 311

Query: 270 V--HKEEEIILSVSN 282
           +  H + +  +S+ N
Sbjct: 312 MNFHSQSQSQVSIIN 326

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746236|emb|CBI16292.3| unnamed protein product [Vitis vinifera]

 Score =  283 bits (725), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 157/315 (49%), Positives = 200/315 (63%), Gaps = 38/315 (12%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHPSDEELIVHYL  KV S PLPAS+IAEIDLYKYNPW+LP+KALFGEEEWYFF+PRDRK
Sbjct: 17  FHPSDEELIVHYLQKKVTSHPLPASVIAEIDLYKYNPWELPKKALFGEEEWYFFSPRDRK 76

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG RPNRAAASGFWKATGTDKPILTS G+KSIGVKKALVFY GRPP+G KT+WIM+EY
Sbjct: 77  YPNGVRPNRAAASGFWKATGTDKPILTSCGSKSIGVKKALVFYIGRPPRGVKTEWIMNEY 136

Query: 121 RLPDTIAWTPNR-KGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELR 179
           RL +T+    +R KGSMRLDDWVLCRVR      +   + ++  S E    ++ K+ E +
Sbjct: 137 RLLNTMNRPGSRSKGSMRLDDWVLCRVRHKGNMPKNTCEGQDSPSTELI-SYLPKIEEQQ 195

Query: 180 HMNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGDKSCL--AAHDE 237
            M+    + +M   YLYN C ++  I A         +T SN++F+G + S    + H++
Sbjct: 196 PMHTK--HNDMDTGYLYNHCELIASILAGHPLPHN--ETISNVTFKGSNNSNSHGSVHED 251

Query: 238 --------------DSLFNPLK--------------RIKLMEKNQQDDCVPPSKKIKEGY 269
                         DS FNPL                 K++  N +D+ + P K     +
Sbjct: 252 GSDKVNLPITVSSFDSFFNPLNGNSTEKHRYENPPPSQKMLTSNNEDESLSPHKTSTNNH 311

Query: 270 V--HKEEEIILSVSN 282
           +  H + +  +S+ N
Sbjct: 312 MNFHSQSQSQVSIIN 326

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547188|ref|XP_003541998.1| PREDICTED: NAC domain-containing protein 68-like [Glycine max]

 Score =  281 bits (720), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 166/346 (47%), Positives = 209/346 (60%), Gaps = 37/346 (10%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHPSDEELIVHYL NK++S PLPASIIAEI+LYKYNPW+LP K+LFGEEEWYFF+PRDRK
Sbjct: 18  FHPSDEELIVHYLQNKISSRPLPASIIAEINLYKYNPWELPNKSLFGEEEWYFFSPRDRK 77

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG RPNRAAASG+WKATGTDKPIL+S G+K IGVKKALVFY GRPPKG KTDWIM+EY
Sbjct: 78  YPNGLRPNRAAASGYWKATGTDKPILSSCGSKRIGVKKALVFYSGRPPKGAKTDWIMNEY 137

Query: 121 RLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNEL-- 178
           RL DTI  +   KGSMRLDDWVLCRVR       K +  +N    + +P  ++   +L  
Sbjct: 138 RLVDTITTSSRLKGSMRLDDWVLCRVRH------KGYSPKNSCENQESPNELNLSAKLPR 191

Query: 179 --RHMNNTNPNVEMVKSYLYNDCSMLPYIFASRDFTSCCIDTDSNISFQGGDKSCLAAHD 236
              +  N N   +M+  Y Y D  ++  I           ++  N+SF+G   + + +  
Sbjct: 192 SEEYPTNMNCRADMIPDYQYKDYQIIASILVGGPIPP--TESMPNLSFKGCKGNNVVSVY 249

Query: 237 ED---------------SLFNPLKRIKLMEKNQQDDCVPPSKKIKEGYVHKEEEIILSVS 281
           ED               S FNPL R K  E  Q  + +  ++K      + E  +  S S
Sbjct: 250 EDDFTKVNSQATIPSLESYFNPLTR-KSSEDEQYGNLISFNRKF-----NTENRMDGSTS 303

Query: 282 NESTG-ETNIYETDHSEGNNFSHDHHQWSHTMQYHQELNNLVFTGK 326
              T  E N Y  + S+ + F+ +    S      QELN L F+G+
Sbjct: 304 KVLTSRELNCYNQNQSQDDIFNVNPPDPSINF---QELNELDFSGR 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.524	0.529	0.639	1.4e-60
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.653	0.585	0.533	7.3e-59
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.472	0.481	0.660	1.5e-58
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.607	0.738	0.549	3.3e-56
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.481	0.620	0.609	6.3e-53
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.438	0.494	0.657	7.2e-52
TAIR|locus:2095908	359	NAC047 "NAC domain containing	0.555	0.504	0.540	1.9e-51
TAIR|locus:504956335	283	ATAF2 [Arabidopsis thaliana (t	0.438	0.505	0.632	2.2e-50
TAIR|locus:2160634	312	NAC102 "NAC domain containing	0.435	0.455	0.641	4.6e-50
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.831	0.854	0.422	1.2e-49

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 596 (214.9 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
 Identities = 117/183 (63%), Positives = 137/183 (74%)

Query:     1 FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
             FHP+DEEL+VHYL  K  S+PLP SIIAEIDLYK++PW+LP KA FGE EWYFF+PRDRK
Sbjct:    22 FHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYFFSPRDRK 81

Query:    61 YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
             YPNG RPNRAA SG+WKATGTDKPI T    K +GVKKALVFY G+PPKG KTDWIMHEY
Sbjct:    82 YPNGVRPNRAATSGYWKATGTDKPIFTCNSHK-VGVKKALVFYGGKPPKGIKTDWIMHEY 140

Query:   121 RLPD----TIAWTPN----RKGSMRLDDWVLCRV-RQNSINSRKAWDDRNGYSYEAAPGF 171
             RL D    T A  P+    RK S+RLDDWVLCR+ ++NS  S++   +R     +   G 
Sbjct:   141 RLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKNS--SQRPTMERVLLREDLMEGM 198

Query:   172 ISK 174
             +SK
Sbjct:   199 LSK 201

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
 Identities = 120/225 (53%), Positives = 152/225 (67%)

Query:     1 FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
             FHP+DEEL+VHYL  K AS PLP +IIAE+DLYK++PW+LP KA FGE+EWYFF+PRDRK
Sbjct:    23 FHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFFSPRDRK 82

Query:    61 YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
             YPNGARPNRAA SG+WKATGTDKP+L S G + +GVKKALVFY G+PPKG K+DWIMHEY
Sbjct:    83 YPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYSGKPPKGVKSDWIMHEY 142

Query:   121 RLPDTIAWT-P------NRKGSMRLDDWVLCRVRQNSINSRKAWDDRN----GYSYEAAP 169
             RL +      P      N+K S+RLDDWVLCR+ + +  SR   +D++     Y +   P
Sbjct:   143 RLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKNNASRHVDNDKDHDMIDYIFRKIP 202

Query:   170 GFISKVNELRHMNNTNPNVEMVKSYLYNDCSMLPY-IFASRDFTS 213
               +S       ++  + NV    ++     S   Y IF+    TS
Sbjct:   203 PSLSMAAASTGLHQHHHNVSRSMNFFPGKFSGGGYGIFSDGGNTS 247

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
 Identities = 107/162 (66%), Positives = 132/162 (81%)

Query:     1 FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
             FHP+DEEL++HYL  K  S+PLP +IIA++DLYK++PW+LP KA FGE+EWYFF+PRDRK
Sbjct:    23 FHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRK 82

Query:    61 YPNGARPNRAAASGFWKATGTDKPILTSFG--TKSIGVKKALVFYEGRPPKGYKTDWIMH 118
             YPNGARPNRAA SG+WKATGTDKP++++ G  +K +GVKKALVFY G+PPKG K+DWIMH
Sbjct:    83 YPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMH 142

Query:   119 EYRLPDT----IAWTPNRKGSMRLDDWVLCRV--RQNSINSR 154
             EYRL D     I    N+K S+RLDDWVLCR+  + NS  SR
Sbjct:   143 EYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNSTASR 184

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 111/202 (54%), Positives = 140/202 (69%)

Query:     1 FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
             FHP+DEELIV+YL N+  S P P SII E+D+YK++PW LP K  FGE EWYFF+PR+RK
Sbjct:    15 FHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEWYFFSPRERK 74

Query:    61 YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
             YPNG RPNRAA SG+WKATGTDK I +  G+ ++GVKKALVFY+GRPPKG KTDWIMHEY
Sbjct:    75 YPNGVRPNRAAVSGYWKATGTDKAIHS--GSSNVGVKKALVFYKGRPPKGIKTDWIMHEY 132

Query:   121 RLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELRH 180
             RL D+   +  R GSMRLD+WVLCR+ +    + K  +++ G+  E      +KV     
Sbjct:   133 RLHDSRKASTKRNGSMRLDEWVLCRIYKKR-GASKLLNEQEGFMDEVLMEDETKVVVNEA 191

Query:   181 MNNTNPNVEMVKSY-LYNDCSM 201
                T   + M+ S  L   CS+
Sbjct:   192 ERRTEEEIMMMTSMKLPRTCSL 213

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 100/164 (60%), Positives = 127/164 (77%)

Query:     1 FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
             FHP+DEEL++ YL  K AS P+PA II E+DLY+Y+PWDLP  AL+GE+EWYFF+PRDRK
Sbjct:    16 FHPTDEELVLMYLCRKCASQPIPAPIITELDLYRYDPWDLPDMALYGEKEWYFFSPRDRK 75

Query:    61 YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
             YPNG+RPNRAA +G+WKATG DKPI      K +G+KKALVFY G+PP G KT+WIMHEY
Sbjct:    76 YPNGSRPNRAAGTGYWKATGADKPIGRP---KPVGIKKALVFYSGKPPNGEKTNWIMHEY 132

Query:   121 RLPDTIAWTPNRKGSMRLDDWVLCRV--RQNSINSRKAWDDRNG 162
             RL D +  +  +K S+RLDDWVLCR+  ++  I  R++ D  +G
Sbjct:   133 RLAD-VDRSVRKKNSLRLDDWVLCRIYNKKGVIEKRRS-DIEDG 174

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 96/146 (65%), Positives = 115/146 (78%)

Query:     1 FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
             FHP+DEEL++HYL  K AS  +   IIAEIDLYKY+PW+LP  AL+GE+EWYFF+PRDRK
Sbjct:    13 FHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSPRDRK 72

Query:    61 YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
             YPNG+RPNR+A SG+WKATG DKPI      K +G+KKALVFY G+ PKG KT+WIMHEY
Sbjct:    73 YPNGSRPNRSAGSGYWKATGADKPIGLP---KPVGIKKALVFYAGKAPKGEKTNWIMHEY 129

Query:   121 RLPDTIAWTPNRKGSMRLDDWVLCRV 146
             RL D       +K S+RLDDWVLCR+
Sbjct:   130 RLADVDRSVRKKKNSLRLDDWVLCRI 155

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2095908 NAC047 "NAC domain containing protein 47" [Arabidopsis thaliana (taxid:3702)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 107/198 (54%), Positives = 139/198 (70%)

Query:     1 FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
             FHP+DEELI+HYL  KV+S P+P SIIA++D+YK +PWDLP KA FGE+EWYFF+PRDRK
Sbjct:    16 FHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAPFGEKEWYFFSPRDRK 75

Query:    61 YPNGARPNRAAASGFWKATGTDKPILTSFGT---KSIGVKKALVFYEGRPPKGYKTDWIM 117
             YPNGARPNRAAASG+WKATGTDK I    G    ++IG+KKALVFY G+PPKG KT+WIM
Sbjct:    76 YPNGARPNRAAASGYWKATGTDKLIAVPNGEGFHENIGIKKALVFYRGKPPKGVKTNWIM 135

Query:   118 HEYRLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRKAWDDRNG--YSYEAAPGFISKV 175
             HEYRL D+++  P R  S R           + +N+   + DRN   YS       + ++
Sbjct:   136 HEYRLADSLS--PKRINSSRSGG--------SEVNNN--FGDRNSKEYSMRLDDWVLCRI 183

Query:   176 NELRHMNNTNPNVEMVKS 193
              +  H + ++P+V +V S
Sbjct:   184 YKKSHASLSSPDVALVTS 201

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006865 "amino acid transport" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

TAIR|locus:504956335 ATAF2 [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 93/147 (63%), Positives = 118/147 (80%)

Query:     1 FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
             FHP+DEEL+  YL  K AS  + A +IAEIDLYK+NPW+LP  +L+GE+EWYFF+PRDRK
Sbjct:    13 FHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPWELPEMSLYGEKEWYFFSPRDRK 72

Query:    61 YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
             YPNG+RPNRAA +G+WKATG DKPI      K++G+KKALVFY G+ PKG KT+WIMHEY
Sbjct:    73 YPNGSRPNRAAGTGYWKATGADKPIGKP---KTLGIKKALVFYAGKAPKGIKTNWIMHEY 129

Query:   121 RLPDTI-AWTPNRKGSMRLDDWVLCRV 146
             RL +   + + N+K ++RLDDWVLCR+
Sbjct:   130 RLANVDRSASVNKKNNLRLDDWVLCRI 156

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP

GO:0008361 "regulation of cell size" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009620 "response to fungus" evidence=IMP

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0043424 "protein histidine kinase binding" evidence=IPI

TAIR|locus:2160634 NAC102 "NAC domain containing protein 102" [Arabidopsis thaliana (taxid:3702)]

 Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
 Identities = 95/148 (64%), Positives = 117/148 (79%)

Query:     1 FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
             FHP+DEEL+  YL  + AS P+   +IAEIDLYK+NPW+LP  AL+GE+EWYFF+ RDRK
Sbjct:    56 FHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRK 115

Query:    61 YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
             YPNG+RPNRAA +G+WKATG DKPI      K++G+KKALVFY G+ PKG KT+WIMHEY
Sbjct:   116 YPNGSRPNRAAGTGYWKATGADKPIGKP---KTLGIKKALVFYAGKAPKGIKTNWIMHEY 172

Query:   121 RLP--DTIAWTPNRKGSMRLDDWVLCRV 146
             RL   D  A T N+K ++RLDDWVLCR+
Sbjct:   173 RLANVDRSAST-NKKNNLRLDDWVLCRI 199

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0001666 "response to hypoxia" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
 Identities = 123/291 (42%), Positives = 174/291 (59%)

Query:     1 FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
             F+P+DEEL+V YL  K A       +IAEIDLYK++PW LP KALFGE+EWYFF+PRDRK
Sbjct:    20 FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRK 79

Query:    61 YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
             YPNG+RPNR A SG+WKATGTDK I+++ G + +G+KKALVFY G+ PKG KT+WIMHEY
Sbjct:    80 YPNGSRPNRVAGSGYWKATGTDK-IISTEGQR-VGIKKALVFYIGKAPKGTKTNWIMHEY 137

Query:   121 RLPDTIAWTPNRK-GSMRLDDWVLCRVRQNSINSRKAWDDRNGYSYEAAPGFISKVNELR 179
             RL +     P+R+ GS +LDDWVLCR+ +   +++K   D NG +   A  F +  N   
Sbjct:   138 RLIE-----PSRRNGSTKLDDWVLCRIYKKQSSAQKQVYD-NGIAN--AREFSN--NGTS 187

Query:   180 HMNNTNPNVEMVKSYLYNDCSMLPYIFASRD-FTSCCID-TDSNISFQG-GDKSCLAAHD 236
                +++ + E V    + +     + F++ +  +S   D T+    F G  D S     D
Sbjct:   188 STTSSSSHFEDVLDSFHQEIDNRNFQFSNPNRISSLRPDLTEQKTGFHGLADTSNF---D 244

Query:   237 EDSLFNPLKRIKLMEKNQQDDCVPPSKKIKEGYVHKEEEIILSVSNESTGE 287
               S    ++    + +      VP + +   GY+  EEE+  S    ++GE
Sbjct:   245 WASFAGNVEHNNSVPELGMSHVVP-NLEYNCGYLKTEEEVESSHGFNNSGE 294

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	326
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	1e-69

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  212 bits (543), Expect = 1e-69
 Identities = 81/125 (64%), Positives = 98/125 (78%), Gaps = 3/125 (2%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPA-SIIAEIDLYKYNPWDLP-RKALFGEEEWYFFTPRD 58
           FHP+DEEL+V+YL  KV   PLP   +I E+D+YK+ PWDLP  KA  G+ EWYFF+PRD
Sbjct: 7   FHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGGDREWYFFSPRD 66

Query: 59  RKYPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMH 118
           RKYPNG+R NRA  SG+WKATG DKP+L S G + +G+KK LVFY+GR PKG KTDW+MH
Sbjct: 67  RKYPNGSRTNRATGSGYWKATGKDKPVL-SKGGEVVGMKKTLVFYKGRAPKGEKTDWVMH 125

Query: 119 EYRLP 123
           EYRL 
Sbjct: 126 EYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	326
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=1.4e-39  Score=274.91  Aligned_cols=122  Identities=57%  Similarity=1.159  Sum_probs=93.9

Q ss_pred             CCCChHHHHHHHHHHhHcCCCCCC-cceeeccCCCCCCCCCCccccCCCceEEEEeccCCcCCCCCCCcccCCCCeEEee
Q 042614            1 FHPSDEELIVHYLTNKVASIPLPA-SIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRKYPNGARPNRAAASGFWKAT   79 (326)
Q Consensus         1 F~PTDEELV~~YL~~Ki~G~plp~-~~I~evDVY~~ePwdLP~~~~~g~~eWYFFspr~rKy~~G~R~nRatg~GyWKat   79 (326)
                      |+|||+|||.+||++|+.|.+++. .+|+++|||+++||+||+....++.+||||+++++++.+|.|++|++++|+||++
T Consensus         7 F~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~G~Wk~~   86 (129)
T PF02365_consen    7 FRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGGGYWKST   86 (129)
T ss_dssp             E---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEETTEEEEEE
T ss_pred             ecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhccCCCceEEEEEecccccCCcccccccccceEEeec
Confidence            899999999999999999999888 7999999999999999954444678999999999999999999999999999999


Q ss_pred             cCCcceEeCCCCeEEEEEEEeeeecCCCCCCCccCeEEEEEEcC
Q 042614           80 GTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEYRLP  123 (326)
Q Consensus        80 G~~k~I~~~~gg~vIG~KktLvFY~gr~pkg~kT~WvMhEYrL~  123 (326)
                      |++++|.+. ++.+||+|++|+||.++.+++.+|+|+||||+|.
T Consensus        87 g~~~~i~~~-~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   87 GKEKPIKDP-GGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             CEEEEEEE--TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             ccccccccc-cceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            999999986 7899999999999999888999999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	326
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		3e-51
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		4e-51
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		4e-51

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  198 bits (504), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 95/156 (60%), Positives = 119/156 (76%), Gaps = 8/156 (5%)
Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           F+P+DEEL+V YL  K A       +IAEIDLYK++PW LP KALFGE+EWYFF+PRDRK
Sbjct: 23  FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRK 82
Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG+RPNR A SG+WKATGTDK I T    + +G+KKALVFY G+ PKG KT+WIMHEY
Sbjct: 83  YPNGSRPNRVAGSGYWKATGTDKIISTE--GQRVGIKKALVFYIGKAPKGTKTNWIMHEY 140
Query: 121 RLPDTIAWTPNRK-GSMRLDDWVLCRVRQNSINSRK 155
           RL +     P+R+ GS +LDDWVLCR+ +   +++K
Sbjct: 141 RLIE-----PSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  198 bits (503), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 95/147 (64%), Positives = 115/147 (78%), Gaps = 3/147 (2%)
Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHP+D+EL+ HYL  K A   LP  IIAE+DLYK++PWDLP +ALFG  EWYFFTPRDRK
Sbjct: 21  FHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRK 80
Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG+RPNRAA +G+WKATG DKP+      +++G+KKALVFY G+ P+G KTDWIMHEY
Sbjct: 81  YPNGSRPNRAAGNGYWKATGADKPVAPR--GRTLGIKKALVFYAGKAPRGVKTDWIMHEY 138
Query: 121 RL-PDTIAWTPNRKGSMRLDDWVLCRV 146
           RL     A    +KGS+RLDDWVLCR+
Sbjct: 139 RLADAGRAAAGAKKGSLRLDDWVLCRL 165

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  198 bits (503), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 95/156 (60%), Positives = 119/156 (76%), Gaps = 8/156 (5%)
Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           F+P+DEEL+V YL  K A       +IAEIDLYK++PW LP KALFGE+EWYFF+PRDRK
Sbjct: 26  FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRK 85
Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG+RPNR A SG+WKATGTDK I T    + +G+KKALVFY G+ PKG KT+WIMHEY
Sbjct: 86  YPNGSRPNRVAGSGYWKATGTDKIISTE--GQRVGIKKALVFYIGKAPKGTKTNWIMHEY 143
Query: 121 RLPDTIAWTPNRK-GSMRLDDWVLCRVRQNSINSRK 155
           RL +     P+R+ GS +LDDWVLCR+ +   +++K
Sbjct: 144 RLIE-----PSRRNGSTKLDDWVLCRIYKKQSSAQK 174

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	326
1ut7_A	171	No apical meristem protein; transcription regulati	7e-93
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	1e-92
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  272 bits (698), Expect = 7e-93
 Identities = 94/155 (60%), Positives = 116/155 (74%), Gaps = 6/155 (3%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           F+P+DEEL+V YL  K A       +IAEIDLYK++PW LP KALFGE+EWYFF+PRDRK
Sbjct: 23  FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRK 82

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG+RPNR A SG+WKATGTDK I T    + +G+KKALVFY G+ PKG KT+WIMHEY
Sbjct: 83  YPNGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIGKAPKGTKTNWIMHEY 140

Query: 121 RLPDTIAWTPNRKGSMRLDDWVLCRVRQNSINSRK 155
           RL +       R GS +LDDWVLCR+ +   +++K
Sbjct: 141 RLIE----PSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  272 bits (697), Expect = 1e-92
 Identities = 97/156 (62%), Positives = 117/156 (75%), Gaps = 3/156 (1%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           FHP+D+EL+ HYL  K A   LP  IIAE+DLYK++PWDLP +ALFG  EWYFFTPRDRK
Sbjct: 21  FHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRK 80

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG+RPNRAA +G+WKATG DKP+      +++G+KKALVFY G+ P+G KTDWIMHEY
Sbjct: 81  YPNGSRPNRAAGNGYWKATGADKPVAP--RGRTLGIKKALVFYAGKAPRGVKTDWIMHEY 138

Query: 121 RLPD-TIAWTPNRKGSMRLDDWVLCRVRQNSINSRK 155
           RL D   A    +KGS+RLDDWVLCR+        K
Sbjct: 139 RLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 2e-06
 Identities = 53/349 (15%), Positives = 95/349 (27%), Gaps = 112/349 (32%)

Query: 1   FHPSD-EELIVHYLTNKVASI--------PLPASIIAE--------IDLYK-YNPWDLPR 42
             P + + L++ YL  +   +        P   SIIAE         D +K  N   L  
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 43  ------KAL-FGEEEWYF-----FTPRDRKYPNGARPNRAAASGFWKATGTDKP--ILTS 88
                   L   E    F     F P     P          S  W          ++  
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVF-PPSAHIP------TILLSLIWFDVIKSDVMVVVNK 410

Query: 89  FGTKSIGVKKALVFYEGRPPKGYKTDWIMHEYRLPD-TIAWTPNRKGSMRLDDWVLCRVR 147
                   K +LV  E +P +            +P   +      +    L   ++    
Sbjct: 411 L------HKYSLV--EKQPKEST--------ISIPSIYLELKVKLENEYALHRSIV---- 450

Query: 148 QNSINSRKAWDDRN-------GYSYEAAPGFISKVNELRHMNNTNPNVEMVKSYLYNDCS 200
            +  N  K +D  +        Y Y      I       H+ N                +
Sbjct: 451 -DHYNIPKTFDSDDLIPPYLDQYFYS----HIG-----HHLKNIEH---------PERMT 491

Query: 201 MLPYIFASRDFTSCCIDTDSNISFQGGDKSCLAAHDEDSLFNPLKRIKLMEKNQQDDCVP 260
           +   +F    F       +  I          A +   S+ N L+++K  +    D+   
Sbjct: 492 LFRMVFLDFRF------LEQKIR-----HDSTAWNASGSILNTLQQLKFYKPYICDNDPK 540

Query: 261 PSKKIK--EGYVHKEEEII----------LSVSNESTGETNIYETDHSE 297
             + +     ++ K EE +          +++  E      I+E  H +
Sbjct: 541 YERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEA---IFEEAHKQ 586

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	326
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=3.7e-53  Score=376.65  Aligned_cols=149  Identities=64%  Similarity=1.240  Sum_probs=128.2

Q ss_pred             CCCChHHHHHHHHHHhHcCCCCCCcceeeccCCCCCCCCCCccccCCCceEEEEeccCCcCCCCCCCcccCCCCeEEeec
Q 042614            1 FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRKYPNGARPNRAAASGFWKATG   80 (326)
Q Consensus         1 F~PTDEELV~~YL~~Ki~G~plp~~~I~evDVY~~ePwdLP~~~~~g~~eWYFFspr~rKy~~G~R~nRatg~GyWKatG   80 (326)
                      |||||||||.|||++|+.|.+++..+|+++|||++|||+||+.+..++.+|||||++++||++|.|++|+|++||||++|
T Consensus        21 F~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~nR~t~~G~WkatG  100 (174)
T 3ulx_A           21 FHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATG  100 (174)
T ss_dssp             CCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSCSSEEEEEEECCC-----CCSCEEETTEEEEECS
T ss_pred             eCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccCCceEEEEeccccccCCCCCceeecCCceEccCC
Confidence            99999999999999999999999999999999999999999998888999999999999999999999999999999999


Q ss_pred             CCcceEeCCCCeEEEEEEEeeeecCCCCCCCccCeEEEEEEcCCCCCCC-CCCCCCCCCCcEEEEEEEecCC
Q 042614           81 TDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEYRLPDTIAWT-PNRKGSMRLDDWVLCRVRQNSI  151 (326)
Q Consensus        81 ~~k~I~~~~gg~vIG~KktLvFY~gr~pkg~kT~WvMhEYrL~~~~~~~-~~~~g~~~~dd~VLCRI~~K~~  151 (326)
                      ++++|.+.  |.+||+||+|+||.|++|+|.+|+|+||||+|.+..... ....+++.+++|||||||+|+.
T Consensus       101 ~dk~I~~~--g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K~~  170 (174)
T 3ulx_A          101 ADKPVAPR--GRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKN  170 (174)
T ss_dssp             CCEEECCS--SSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEESCC
T ss_pred             CCcEEeeC--CcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEcCC
Confidence            99999874  799999999999999999999999999999999875432 1122345678999999999864

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=1.8e-52  Score=371.36  Aligned_cols=146  Identities=63%  Similarity=1.172  Sum_probs=124.4

Q ss_pred             CCCChHHHHHHHHHHhHcCCCCCCcceeeccCCCCCCCCCCccccCCCceEEEEeccCCcCCCCCCCcccCCCCeEEeec
Q 042614            1 FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRKYPNGARPNRAAASGFWKATG   80 (326)
Q Consensus         1 F~PTDEELV~~YL~~Ki~G~plp~~~I~evDVY~~ePwdLP~~~~~g~~eWYFFspr~rKy~~G~R~nRatg~GyWKatG   80 (326)
                      |||||||||.|||++|+.|.+++..+|+++|||++|||+||+.+..++.+|||||++++||++|.|++|+|++||||++|
T Consensus        23 F~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~k~~~g~R~~R~t~~G~Wk~tG  102 (171)
T 1ut7_A           23 FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATG  102 (171)
T ss_dssp             ECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEEETTEEEEEEE
T ss_pred             eCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcCCccEEEEeccccccCCCCcccccCCCCEEeccC
Confidence            89999999999999999999999999999999999999999998888999999999999999999999999999999999


Q ss_pred             CCcceEeCCCCeEEEEEEEeeeecCCCCCCCccCeEEEEEEcCCCCCCCCCCCCCCCCCcEEEEEEEecCCC
Q 042614           81 TDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEYRLPDTIAWTPNRKGSMRLDDWVLCRVRQNSIN  152 (326)
Q Consensus        81 ~~k~I~~~~gg~vIG~KktLvFY~gr~pkg~kT~WvMhEYrL~~~~~~~~~~~g~~~~dd~VLCRI~~K~~~  152 (326)
                      ++++|...  +.+||+||+|+||.|++|++.+|+|+||||+|......    .+.+..++|||||||+|...
T Consensus       103 ~~k~I~~~--~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~----~~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A          103 TDKIISTE--GQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             EEEEEEET--TEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC------------CCEEEEEEEECC--
T ss_pred             CCceEEec--CcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccc----cCcccCCCEEEEEEEEcCCC
Confidence            99999974  69999999999999999999999999999999987421    12345689999999999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	326
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	2e-63

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  196 bits (499), Expect = 2e-63
 Identities = 93/148 (62%), Positives = 112/148 (75%), Gaps = 6/148 (4%)

Query: 1   FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRK 60
           F+P+DEEL+V YL  K A       +IAEIDLYK++PW LP KALFGE+EWYFF+PRDRK
Sbjct: 23  FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRK 82

Query: 61  YPNGARPNRAAASGFWKATGTDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEY 120
           YPNG+RPNR A SG+WKATGTDK I  S   + +G+KKALVFY G+ PKG KT+WIMHEY
Sbjct: 83  YPNGSRPNRVAGSGYWKATGTDKII--STEGQRVGIKKALVFYIGKAPKGTKTNWIMHEY 140

Query: 121 RLPDTIAWTPNRKGSMRLDDWVLCRVRQ 148
           RL +       R GS +LDDWVLCR+ +
Sbjct: 141 RLIE----PSRRNGSTKLDDWVLCRIYK 164

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	326
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.1e-49  Score=344.24  Aligned_cols=144  Identities=64%  Similarity=1.188  Sum_probs=122.8

Q ss_pred             CCCChHHHHHHHHHHhHcCCCCCCcceeeccCCCCCCCCCCccccCCCceEEEEeccCCcCCCCCCCcccCCCCeEEeec
Q 042614            1 FHPSDEELIVHYLTNKVASIPLPASIIAEIDLYKYNPWDLPRKALFGEEEWYFFTPRDRKYPNGARPNRAAASGFWKATG   80 (326)
Q Consensus         1 F~PTDEELV~~YL~~Ki~G~plp~~~I~evDVY~~ePwdLP~~~~~g~~eWYFFspr~rKy~~G~R~nRatg~GyWKatG   80 (326)
                      |+|||||||.|||++|+.|.+++.++|+++|||+++||+||+....++++||||+++.+++++|.|.+|++++|+||++|
T Consensus        23 F~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~k~~~g~r~~R~~g~G~Wk~~g  102 (166)
T d1ut7a_          23 FYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATG  102 (166)
T ss_dssp             ECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEEETTEEEEEEE
T ss_pred             cCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccCcceEEEEeeeccccCCCCccccccCCCEecccC
Confidence            89999999999999999999999999999999999999999988888999999999999999999999999999999999


Q ss_pred             CCcceEeCCCCeEEEEEEEeeeecCCCCCCCccCeEEEEEEcCCCCCCCCCCCCCCCCCcEEEEEEEecC
Q 042614           81 TDKPILTSFGTKSIGVKKALVFYEGRPPKGYKTDWIMHEYRLPDTIAWTPNRKGSMRLDDWVLCRVRQNS  150 (326)
Q Consensus        81 ~~k~I~~~~gg~vIG~KktLvFY~gr~pkg~kT~WvMhEYrL~~~~~~~~~~~g~~~~dd~VLCRI~~K~  150 (326)
                      +++.|.+  +|.+||+||+|+||+++++++.+|+|+||||+|.+....    .++...++|||||||+|.
T Consensus       103 ~~~~i~~--~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~----~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         103 TDKIIST--EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             EEEEEEE--TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC------------CCEEEEEEEECC
T ss_pred             CCceEec--CCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccc----cCccccCCEEEEEEEecC
Confidence            9998876  579999999999999999999999999999999886432    233467899999999984