Citrus Sinensis ID: 042754

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MGDTRDSVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD
Secondary Structure (PSIPRED)
ccccccccccccEEEEEcccccHHHHHHHHccHHHHHHHHHccccEEEEccccccccccccccccccccEEEEEcHHHHHHHHHHccEEEEEcccHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHcccEEEEccccHHHHHHcccccccccccccccHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEEEEEccccHHHHHHHHccHHHHHHHHHccccEEEEEEccccEcccccccccccEEEEEEEccccHHHHHHHccEEEEcccHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHHHcccEEEEcHHHHHHHHHHcccHcccccccccHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mgdtrdsvsLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQmgrgtyvptkslgedglmavdYFTFSSSIADHLRSASLVIShagsgsifetlrhgkplIVVVNEDLMDNHQSELAEELAARKHLycahpqslHQVIAGMdlesllpyqpgdatpVAKLINRFLGFPDD
Flexible Loop (DISEMBL)
mgdtrdsvslkrIVFVTVGTTCFDALVKAVdtlevkqeltrrgythlliqmgrgtyvpTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD
Low Complexity Region (SEG)
MGDTRDSVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD
Disordered region (IsUnstruct)
*********LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLG****
Disordered Region (DISOPRED)
*************VFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGMDLE***********PVAKLINRFLGFPD*
Disordered Region (DISEMBL)
********SLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD
Disordered Region (DISPRO)
*********LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPD*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGDTRDSVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	178	2.2.26 [Sep-21-2011]
Q5I0K7	165	UDP-N-acetylglucosamine t	yes	no	0.915	0.987	0.433	1e-29
Q9NP73	1137	UDP-N-acetylglucosamine t	no	no	0.691	0.108	0.476	4e-26
Q9D8C3	1166	UDP-N-acetylglucosamine t	no	no	0.696	0.106	0.507	6e-26
O14190	162	UDP-N-acetylglucosamine t	yes	no	0.859	0.944	0.386	5e-22
Q6C3P1	196	UDP-N-acetylglucosamine t	yes	no	0.696	0.632	0.417	6e-19
Q4WQN1	197	UDP-N-acetylglucosamine t	yes	no	0.758	0.685	0.363	7e-18
P53178	202	UDP-N-acetylglucosamine t	yes	no	0.820	0.722	0.338	2e-16
Q750J3	203	UDP-N-acetylglucosamine t	yes	no	0.938	0.822	0.324	8e-16
Q6FVR6	198	UDP-N-acetylglucosamine t	yes	no	0.797	0.717	0.352	9e-15
Q6CXY0	197	UDP-N-acetylglucosamine t	yes	no	0.741	0.670	0.347	8e-14

>sp|Q5I0K7|ALG13_RAT UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Rattus norvegicus GN=Alg13 PE=1 SV=1

 Score =  129 bits (324), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 98/166 (59%), Gaps = 3/166 (1%)

Query: 10  LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMA 69
           +KR  FVTVGTT FD LV  V   +  Q L   GY HL++Q+GRGT VP     E     
Sbjct: 1   MKR-AFVTVGTTSFDDLVARVVANDTVQILKSLGYNHLVLQIGRGTVVPEPFSTEP--FT 57

Query: 70  VDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA 129
           +D + +  S+ + L+ A LVISHAG+GS  E+L  GKPL+VVVNE LM+NHQ ELA++L 
Sbjct: 58  LDVYRYKESLKEDLQQADLVISHAGAGSCLESLEKGKPLVVVVNEKLMNNHQFELAKQLH 117

Query: 130 ARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGF 175
              HL+      L  ++  MDL +L  Y PG     +  +++ +G 
Sbjct: 118 KEGHLFYCTCSMLPGLLQSMDLSTLKCYPPGQPEKFSAFLDKVVGL 163

May be involved in protein N-glycosylation, second step of the dolichol-linked oligosaccharide pathway.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4EC: 1

>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo sapiens GN=ALG13 PE=1 SV=2

 Score =  117 bits (293), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 60/126 (47%), Positives = 81/126 (64%), Gaps = 3/126 (2%)

Query: 12  RIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD 71
           + VFVTVGTT FD L+  V   +  Q++   GY  L++Q+GRGT VP     E     +D
Sbjct: 2   KCVFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPFSTES--FTLD 59

Query: 72  YFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR 131
            + +  S+ + ++ A LVISHAG+GS  ETL  GKPL+VV+NE LM+NHQ ELA++L   
Sbjct: 60  VYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQLELAKQLHKE 119

Query: 132 KHL-YC 136
            HL YC
Sbjct: 120 GHLFYC 125

Isoform 2 may be involved in protein N-glycosylation, second step of the dolichol-linked oligosaccharide pathway.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus musculus GN=Alg13 PE=2 SV=2

 Score =  116 bits (291), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 65/128 (50%), Positives = 82/128 (64%), Gaps = 4/128 (3%)

Query: 10  LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMA 69
           +KR  FVTVGTT FD LV  V   +  Q L   GY HL++Q+GRGT VP     E     
Sbjct: 1   MKR-AFVTVGTTSFDELVARVVANDCVQILESLGYNHLVLQVGRGTVVPKPFRTES--FT 57

Query: 70  VDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA 129
           +D + +  S+ + L+ A LVISHAG+GS  E+L  GKPL+VVVNE LM+NHQ ELA++L 
Sbjct: 58  LDVYRYKDSLKEDLQQADLVISHAGAGSCLESLEKGKPLVVVVNEKLMNNHQFELAKQLH 117

Query: 130 ARKHL-YC 136
              HL YC
Sbjct: 118 KEGHLFYC 125

Isoform 2 may be involved in protein N-glycosylation, second step of the dolichol-linked oligosaccharide pathway (By. similarity).

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|O14190|ALG13_SCHPO UDP-N-acetylglucosamine transferase subunit alg13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg13 PE=3 SV=1

 Score =  103 bits (258), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 92/158 (58%), Gaps = 5/158 (3%)

Query: 15  FVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRG--TYVPTKSLGEDGLMAVDY 72
           FVTVG+T FD L++AV   E +  L + G   L++Q G+G   +   KS+    ++  DY
Sbjct: 4   FVTVGSTQFDDLIRAVLKPEFQHCLVKHGINQLIVQYGKGKQAFGDPKSVAGLTILGFDY 63

Query: 73  FTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARK 132
              +  I  ++  AS+VISHAG+GSI +TLR GK L+VV NE LMDNHQ ELA +LA+  
Sbjct: 64  ---APEIESYIHDASIVISHAGAGSILQTLRSGKRLLVVPNESLMDNHQVELATKLASMN 120

Query: 133 HLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLIN 170
           +L      +L + +  +  + L P+   D +   K++ 
Sbjct: 121 YLVTCSTSNLVEGLEELYPKILTPFPKSDCSTFQKVMQ 158

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q6C3P1|ALG13_YARLI UDP-N-acetylglucosamine transferase subunit ALG13 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ALG13 PE=3 SV=1

 Score = 93.6 bits (231), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 83/127 (65%), Gaps = 3/127 (2%)

Query: 13  IVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGT-YVPTKSLGEDGLMAV 70
           +V VT G T  F+AL++ V + E    L++ G++ + +Q GRG  ++ TK   ++G+M++
Sbjct: 29  LVLVTTGGTVPFEALIELVLSHESITTLSQLGFSKMRVQYGRGNRHIFTKH-HKEGVMSI 87

Query: 71  DYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA 130
             F ++  +A  +  A LVISHAG+GS+ + LR GK  +VVVN  LMDNHQ E+AEEL  
Sbjct: 88  TGFEYTDDLAGEMSRAHLVISHAGTGSVLDALRIGKHPVVVVNSKLMDNHQIEIAEELFR 147

Query: 131 RKHLYCA 137
           ++HL  +
Sbjct: 148 KRHLLVS 154

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q4WQN1|ALG13_ASPFU UDP-N-acetylglucosamine transferase subunit alg13 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=alg13 PE=3 SV=2

 Score = 90.1 bits (222), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 78/154 (50%), Gaps = 19/154 (12%)

Query: 12  RIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYV------------- 57
           ++ FVTVG T  F+ LV+A         L   GY+HLL+Q G+   +             
Sbjct: 5   KVCFVTVGATASFEELVRAALDPSFVTALEENGYSHLLVQYGKNAVIYENFLKQYPPERR 64

Query: 58  PTKSLGEDGLMAVDY-----FTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVV 112
           P + +   G    ++     F  + +     RS  LVISHAGSG+I E LR G PLIVV 
Sbjct: 65  PWRRINISGFSFHEHGLGGDFALAQADISKGRSGGLVISHAGSGTILEVLRMGIPLIVVP 124

Query: 113 NEDLMDNHQSELAEELAARKHLYCAHPQSLHQVI 146
           N  L DNHQ ELA +L  + ++  +H Q+L Q +
Sbjct: 125 NPSLQDNHQEELARQLQKQGYVVASHYQNLCQAL 158

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|P53178|ALG13_YEAST UDP-N-acetylglucosamine transferase subunit ALG13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALG13 PE=1 SV=1

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 34/180 (18%)

Query: 11  KRIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRG--------------- 54
           ++ +FVT G T  F  LV  V + E  QEL + G+  L+IQ GR                
Sbjct: 6   EKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQ 65

Query: 55  ---TYVPTKSLG----------EDGLMAVDYFTFSSSIADHLRSAS-LVISHAGSGSIFE 100
                +P    G           +G + V  F FS+ +   +R  S LVISHAG+GSI +
Sbjct: 66  RESQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILD 125

Query: 101 TLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGM---DLESLLPY 157
           +LR  KPLIV VN+ LMDNHQ ++A++     +++   P     +IAG+     E L P+
Sbjct: 126 SLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCAPTETG-LIAGLRASQTEKLKPF 184

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q750J3|ALG13_ASHGO UDP-N-acetylglucosamine transferase subunit ALG13 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ALG13 PE=3 SV=1

 Score = 83.2 bits (204), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 89/194 (45%), Gaps = 27/194 (13%)

Query: 4   TRDSVSLKRIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRG-------- 54
           T+  +   + V VT G T  F  LV AV    V  EL + G++ +++Q GRG        
Sbjct: 5   TKSKMEGPKTVVVTCGATVPFPGLVNAVLDRRVLAELAQCGFSRVMVQYGRGFAAEFERQ 64

Query: 55  ---TYVPTKSLGEDGLMAVDY------------FTFSSSIADHL-RSASLVISHAGSGSI 98
                    +   +GL   D             F F + +   +  SA+LV+SHAG+GSI
Sbjct: 65  VGAAGAVRAACDAEGLEGCDAHAWRWQGLEIIGFAFHAQMESLIGTSAALVVSHAGTGSI 124

Query: 99  FETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC--AHPQSLHQVIAGMDLESLLP 156
            + LR  KPLIV VNE L+DNHQ ++A    A  HL+   A    L   +A    E+L P
Sbjct: 125 LDALRQQKPLIVCVNEALLDNHQEQIARRFEALGHLWAIRADVDELAGALARSTRETLAP 184

Query: 157 YQPGDATPVAKLIN 170
             P      A+L+ 
Sbjct: 185 LPPAYKQGFAELLQ 198

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q6FVR6|ALG13_CANGA UDP-N-acetylglucosamine transferase subunit ALG13 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ALG13 PE=3 SV=1

 Score = 79.7 bits (195), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 88/176 (50%), Gaps = 34/176 (19%)

Query: 15  FVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRG------------TYVPTKS 61
           FVT G T  F ALV+AV   E    L+R GY  L +Q GRG            T +P +S
Sbjct: 4   FVTCGATVPFPALVEAVLAPEFVGCLSREGYRVLCVQFGRGYDFEAQFTSVTCTRMPLES 63

Query: 62  ---------LGEDGLMAVDY---------FTFSSSIADHL-RSASLVISHAGSGSIFETL 102
                    + ++ +  + Y         F +S++I   + R   +VISHAG+GSI ++L
Sbjct: 64  AEVSELRQLVRDERVTVMGYKVQDVVVLGFAYSNNILQIIDRYGDVVISHAGTGSILDSL 123

Query: 103 RHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGMDL--ESLLP 156
           R  K LIVVVN  LMDNHQ ++AE+     H+   +P ++    A   L  E L+P
Sbjct: 124 RLNKKLIVVVNHTLMDNHQKQIAEKFQNLGHILATNPTAIELCDAMKRLKHEDLIP 179

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q6CXY0|ALG13_KLULA UDP-N-acetylglucosamine transferase subunit ALG13 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ALG13 PE=3 SV=1

 Score = 76.6 bits (187), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 77/161 (47%), Gaps = 29/161 (18%)

Query: 10  LKRIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRG-------------- 54
           +   V VT G T  F  LV+ V    V ++L   GY  ++IQ GRG              
Sbjct: 1   MNNTVLVTCGATVSFPRLVETVLDRSVTEKLKVLGYGRIVIQYGRGFSDTFLQLVEKHLG 60

Query: 55  TYVPTKSLGEDGLMAVDY-------------FTFSSSIADHL-RSASLVISHAGSGSIFE 100
            +   KS G   L  ++              F FS  I   +  +  LVISHAG+GSI +
Sbjct: 61  LFTEKKSCGIKVLDKIENLKVISVDGIEICGFEFSHDIEKLIANNIDLVISHAGTGSILD 120

Query: 101 TLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQS 141
           +LR GK LIVVVN+ LMDNHQ  +A++   +K L+  H  +
Sbjct: 121 SLRVGKKLIVVVNDTLMDNHQQLIADKFEQQKLLWSVHANT 161

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
359496479	178	PREDICTED: UDP-N-acetylglucosamine trans	1.0	1.0	0.808	1e-79
255542566	178	UDP-N-acetylglucosamine transferase subu	1.0	1.0	0.820	2e-79
359487723	178	PREDICTED: LOW QUALITY PROTEIN: UDP-N-ac	1.0	1.0	0.814	2e-78
224131498	179	predicted protein [Populus trichocarpa]	1.0	0.994	0.804	2e-78
147779009	169	hypothetical protein VITISV_015184 [Viti	0.938	0.988	0.844	5e-77
351721001	177	uncharacterized protein LOC100526989 [Gl	0.994	1.0	0.803	2e-76
351725986	175	uncharacterized protein LOC100527305 [Gl	0.943	0.96	0.821	4e-76
388499422	177	unknown [Lotus japonicus]	0.994	1.0	0.786	3e-75
224123226	179	predicted protein [Populus trichocarpa]	1.0	0.994	0.782	4e-75
449435693	177	PREDICTED: UDP-N-acetylglucosamine trans	0.994	1.0	0.792	6e-75

>gi|359496479|ref|XP_002265906.2| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Vitis vinifera] gi|296080958|emb|CBI18624.3| unnamed protein product [Vitis vinifera]

 Score =  300 bits (768), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 144/178 (80%), Positives = 156/178 (87%)

Query: 1   MGDTRDSVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK 60
           MGD+ D +  +R VFVTVGTTCFDALVKAVDT E K+EL+ RGYTHLLIQMGRG+Y P K
Sbjct: 1   MGDSDDGIKSERTVFVTVGTTCFDALVKAVDTQEFKKELSARGYTHLLIQMGRGSYFPKK 60

Query: 61  SLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNH 120
           S GEDG + VDYF FSSSIAD+LRSASLVISHAGSGSIFETLR  KPLIVVVNEDLMDNH
Sbjct: 61  STGEDGSLVVDYFIFSSSIADNLRSASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNH 120

Query: 121 QSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD 178
           QSELAEELA RKHL+CAHPQ+L Q +A M+LESLLPY PGDA PVAKLINRFLGFPDD
Sbjct: 121 QSELAEELAERKHLFCAHPQTLFQTVASMNLESLLPYHPGDAAPVAKLINRFLGFPDD 178

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542566|ref|XP_002512346.1| UDP-N-acetylglucosamine transferase subunit alg13, putative [Ricinus communis] gi|223548307|gb|EEF49798.1| UDP-N-acetylglucosamine transferase subunit alg13, putative [Ricinus communis]

 Score =  300 bits (767), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 146/178 (82%), Positives = 157/178 (88%)

Query: 1   MGDTRDSVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK 60
           M DT D    KR+VFVTVGTT FDALV+AVDT +VKQ+L R+GYTHLLIQMGRG+Y PTK
Sbjct: 1   MEDTLDQNKKKRMVFVTVGTTLFDALVRAVDTEQVKQQLFRKGYTHLLIQMGRGSYTPTK 60

Query: 61  SLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNH 120
           + GEDG +AVDYFTFSSSIADHLRSASLVISHAGSGSIFETLR  KPLIVVVNEDLMDNH
Sbjct: 61  TEGEDGSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRLQKPLIVVVNEDLMDNH 120

Query: 121 QSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD 178
           QSELAEELA RK+LYCA PQ+LH +IA MDLESLLPY  GDATPV KLINRFLGFPDD
Sbjct: 121 QSELAEELAERKYLYCARPQTLHHIIADMDLESLLPYSAGDATPVVKLINRFLGFPDD 178

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487723|ref|XP_003633637.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Vitis vinifera]

 Score =  296 bits (759), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 145/178 (81%), Positives = 156/178 (87%)

Query: 1   MGDTRDSVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK 60
           MGDT D +   R VFVTVGTTCFDALVKAVDT E K+EL  RGYTHLLIQMGRG+Y+PTK
Sbjct: 1   MGDTDDYIKPVRTVFVTVGTTCFDALVKAVDTHEFKRELFARGYTHLLIQMGRGSYIPTK 60

Query: 61  SLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNH 120
           S GEDG + VD+FTFSSSIAD+LRSASLVISHAGSGSIFETLR  KPLIVVVNEDLMDNH
Sbjct: 61  STGEDGSLVVDFFTFSSSIADNLRSASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNH 120

Query: 121 QSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD 178
           QSELAEELA RKHL+CA PQ+L+Q IA M+LESLLPY PGDA  VAKLINRFLGFPDD
Sbjct: 121 QSELAEELAERKHLFCARPQTLYQTIATMNLESLLPYTPGDAAAVAKLINRFLGFPDD 178

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131498|ref|XP_002328554.1| predicted protein [Populus trichocarpa] gi|222838269|gb|EEE76634.1| predicted protein [Populus trichocarpa]

 Score =  296 bits (758), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 144/179 (80%), Positives = 157/179 (87%), Gaps = 1/179 (0%)

Query: 1   MGDTRDSVSL-KRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPT 59
           MGD  +SV   K++VFVTVGTT FDALV+ VDT EVKQEL R GYTHL+IQMGRG+Y P 
Sbjct: 1   MGDIEESVKQEKKVVFVTVGTTLFDALVRTVDTKEVKQELLRNGYTHLIIQMGRGSYTPA 60

Query: 60  KSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDN 119
           KS G+DG +AVDYFTFS SIADHLRSASLVISHAGSGSIFETL+ GKPLIVVVNEDLMDN
Sbjct: 61  KSEGKDGSLAVDYFTFSPSIADHLRSASLVISHAGSGSIFETLQLGKPLIVVVNEDLMDN 120

Query: 120 HQSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD 178
           HQSELAEELA RKHLYCAHPQ+LHQ I+ M++ESLLPY PGDA  VAKLINRFLGFPDD
Sbjct: 121 HQSELAEELAERKHLYCAHPQTLHQTISDMNIESLLPYPPGDAAAVAKLINRFLGFPDD 179

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147779009|emb|CAN71397.1| hypothetical protein VITISV_015184 [Vitis vinifera]

 Score =  291 bits (746), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 141/167 (84%), Positives = 151/167 (90%)

Query: 12  RIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD 71
           R VFVTVGTTCFDALVKAVDT E K+EL  RGYTHLLIQMGRG+Y+PTKS GEDG + VD
Sbjct: 3   RTVFVTVGTTCFDALVKAVDTHEFKRELFARGYTHLLIQMGRGSYIPTKSTGEDGSLVVD 62

Query: 72  YFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR 131
           +FTFSSSIAD+LRSASLVISHAGSGSIFETLR  KPLIVVVNEDLMDNHQSELAEELA R
Sbjct: 63  FFTFSSSIADNLRSASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAER 122

Query: 132 KHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD 178
           KHL+CA PQ+L+Q IA M+LESLLPY PGDA PVAKLINRFLGFPDD
Sbjct: 123 KHLFCARPQTLYQTIATMNLESLLPYHPGDAAPVAKLINRFLGFPDD 169

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721001|ref|NP_001236939.1| uncharacterized protein LOC100526989 [Glycine max] gi|255631316|gb|ACU16025.1| unknown [Glycine max]

 Score =  290 bits (741), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 143/178 (80%), Positives = 153/178 (85%), Gaps = 1/178 (0%)

Query: 1   MGDTRDSVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK 60
           MGD   +   KR+VFVTVGTTCFDALV+AVD+  VKQ L  +GYTHLLIQMGRG+Y+PTK
Sbjct: 1   MGDDEGNDKKKRVVFVTVGTTCFDALVRAVDSNNVKQALFAKGYTHLLIQMGRGSYLPTK 60

Query: 61  SLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNH 120
           S G DG +AVDYFTFSSSIADHLRSASLVISHAGSGSIFETL+ GKPLIVVVNEDLMDNH
Sbjct: 61  SEG-DGSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLQLGKPLIVVVNEDLMDNH 119

Query: 121 QSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD 178
           QSELAEELA RKHLYCA PQ+LHQ IA MDL SL PY PGDATPVAK IN  LGFPDD
Sbjct: 120 QSELAEELADRKHLYCASPQTLHQTIANMDLSSLFPYSPGDATPVAKHINNLLGFPDD 177

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725986|ref|NP_001237879.1| uncharacterized protein LOC100527305 [Glycine max] gi|255632049|gb|ACU16377.1| unknown [Glycine max]

 Score =  289 bits (739), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 138/168 (82%), Positives = 152/168 (90%)

Query: 11  KRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAV 70
           +R+VFVTVGTTCFDALV+A+D+  VK+ L  +GYTHLLIQMGRG+Y+PTKS G+D  +AV
Sbjct: 8   ERVVFVTVGTTCFDALVRAIDSDNVKKALFAKGYTHLLIQMGRGSYLPTKSEGDDCSLAV 67

Query: 71  DYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA 130
           DYFTFSSSIADHLRSASLVISHAGSGSIFETLR GKPL+VVVN+DLMDNHQSELAEELA 
Sbjct: 68  DYFTFSSSIADHLRSASLVISHAGSGSIFETLRLGKPLVVVVNQDLMDNHQSELAEELAD 127

Query: 131 RKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD 178
           RKHLYCA PQ+LHQ IA MDL SLLPY PGDATPVAK INRFLGFPDD
Sbjct: 128 RKHLYCASPQTLHQTIADMDLSSLLPYSPGDATPVAKHINRFLGFPDD 175

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499422|gb|AFK37777.1| unknown [Lotus japonicus]

 Score =  286 bits (731), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 140/178 (78%), Positives = 153/178 (85%), Gaps = 1/178 (0%)

Query: 1   MGDTRDSVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK 60
           M D       +R+VFVTVGTTCFDALV+AVD+  VKQEL  +GYTHL+IQMGRG+YVP K
Sbjct: 1   MEDEEGDQKTRRVVFVTVGTTCFDALVRAVDSQNVKQELFAKGYTHLIIQMGRGSYVPNK 60

Query: 61  SLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNH 120
           S G DG +AVDYFTFSSSIADHLRSASLVISHAGSGSIFE+LR GKPL+VVVNEDLMDNH
Sbjct: 61  SEG-DGSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFESLRLGKPLLVVVNEDLMDNH 119

Query: 121 QSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD 178
           QSELAEELA RKHLYCA PQ++ Q IA MDL SLLPY PGDATPVAK INRFLGFP+D
Sbjct: 120 QSELAEELANRKHLYCASPQTILQTIADMDLNSLLPYSPGDATPVAKHINRFLGFPED 177

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123226|ref|XP_002319026.1| predicted protein [Populus trichocarpa] gi|222857402|gb|EEE94949.1| predicted protein [Populus trichocarpa]

 Score =  285 bits (729), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 140/179 (78%), Positives = 156/179 (87%), Gaps = 1/179 (0%)

Query: 1   MGDTRDSVSL-KRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPT 59
           MGD+ DSV   K++VFVTVGTT FDALV+ VDT EVKQEL R+GYT L+IQMGRG+Y PT
Sbjct: 1   MGDSGDSVKQEKKVVFVTVGTTLFDALVRTVDTKEVKQELLRKGYTDLVIQMGRGSYTPT 60

Query: 60  KSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDN 119
           K  G  G +AVDYFTFS SIADHLRSASLVISHAGSGS+FETL+ GKPLIVVVNEDLMDN
Sbjct: 61  KCDGGHGSLAVDYFTFSPSIADHLRSASLVISHAGSGSVFETLQLGKPLIVVVNEDLMDN 120

Query: 120 HQSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD 178
           HQSELAEELA RKHLYCAHPQ+LHQ I+ M++ESLLPY  GDATP+AKL+N FLGFPDD
Sbjct: 121 HQSELAEELAERKHLYCAHPQTLHQTISDMNVESLLPYPSGDATPLAKLMNTFLGFPDD 179

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435693|ref|XP_004135629.1| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Cucumis sativus] gi|449526666|ref|XP_004170334.1| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Cucumis sativus]

 Score =  285 bits (728), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 141/178 (79%), Positives = 154/178 (86%), Gaps = 1/178 (0%)

Query: 1   MGDTRDSVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK 60
           MGD+     L R+VFVTVGTT FDALV+AVDT +VKQ L  RGYTHLLIQMGRGTY PTK
Sbjct: 1   MGDSEVGGKLTRMVFVTVGTTSFDALVRAVDTEQVKQILYARGYTHLLIQMGRGTYNPTK 60

Query: 61  SLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNH 120
           S GEDGL+ VDYF+FSSSIADHL+SASLVISHAGSGSIFETLR GKPLIVVVNEDLMDNH
Sbjct: 61  SHGEDGLV-VDYFSFSSSIADHLKSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNH 119

Query: 121 QSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD 178
           Q ELAEELA RKHLYCA PQ+LHQ I  ++LES++PY PGDA PVA LINRFLGFP+D
Sbjct: 120 QIELAEELAERKHLYCARPQTLHQTIESLNLESIIPYTPGDAKPVAALINRFLGFPED 177

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
TAIR|locus:2129071	176	AT4G16710 [Arabidopsis thalian	0.971	0.982	0.722	6.2e-62
UNIPROTKB|F1NRT1	165	Gga.11386 "Uncharacterized pro	0.904	0.975	0.466	4.7e-32
ZFIN|ZDB-GENE-040718-161	164	zgc:92907 "zgc:92907" [Danio r	0.898	0.975	0.457	7.9e-30
RGD|1359416	165	Alg13 "asparagine-linked glyco	0.910	0.981	0.436	5.6e-29
UNIPROTKB|E2RPL3	165	LOC100856287 "Uncharacterized	0.904	0.975	0.423	5e-28
UNIPROTKB|K7GM15	165	K7GM15 "Uncharacterized protei	0.904	0.975	0.398	9.4e-27
UNIPROTKB|F1MU60	165	F1MU60 "Uncharacterized protei	0.887	0.957	0.415	1.5e-26
UNIPROTKB|D6RE84	222	ALG13 "UDP-N-acetylglucosamine	0.691	0.554	0.476	1.1e-25
MGI|MGI:1914824	1166	Alg13 "asparagine-linked glyco	0.696	0.106	0.507	1.9e-24
UNIPROTKB|Q9NP73	1137	ALG13 "UDP-N-acetylglucosamine	0.691	0.108	0.476	2.4e-24

TAIR|locus:2129071 AT4G16710 [Arabidopsis thaliana (taxid:3702)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 125/173 (72%), Positives = 141/173 (81%)

Query:     6 DSVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGED 65
             D  + KR+VFVTVGTT FDALVKAV +  VK EL +RG+THLLIQMGRG + PTK  G D
Sbjct:     4 DRENAKRVVFVTVGTTSFDALVKAVVSQNVKDELQKRGFTHLLIQMGRGIFFPTKCDGAD 63

Query:    66 GLMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELA 125
             G + VDYFTFSSSIAD++RSASLVISHAGSGSIFETL+ GKPLIVVVNEDLMDNHQ ELA
Sbjct:    64 GSLVVDYFTFSSSIADYIRSASLVISHAGSGSIFETLKLGKPLIVVVNEDLMDNHQCELA 123

Query:   126 EELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGFPDD 178
             E L  RKHLY   P SLHQ +  M+L SL+ Y PGD TPVA++I+RFLGFPDD
Sbjct:   124 EALEERKHLYYTRPHSLHQTLTKMELGSLVQYTPGDGTPVARIIDRFLGFPDD 176

GO:0005886 "plasma membrane" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

UNIPROTKB|F1NRT1 Gga.11386 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
 Identities = 77/165 (46%), Positives = 100/165 (60%)

Query:    12 RIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD 71
             + VFVTVGTT FD L+ AV +   +Q L  RG   L++Q+GRG   P    G       D
Sbjct:     3 KTVFVTVGTTSFDELIAAVSSPAAEQVLRSRGCRQLVLQIGRGALQPAPQYGP--AFVRD 60

Query:    72 YFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR 131
              F F  S+A+ LR A LVISHAG+GS  ETL  GKPL+VV+NE LMDNHQ ELA +L   
Sbjct:    61 VFRFKESLAEDLRRADLVISHAGAGSCLETLEEGKPLLVVINEKLMDNHQLELARQLHKD 120

Query:   132 KH-LYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLGF 175
              H LYC +  +L + +  MDL +L P+ PG     A  +++ +GF
Sbjct:   121 GHVLYC-NCSTLVETLQSMDLSTLKPFPPGQPEKFALFLDKVVGF 164

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

ZFIN|ZDB-GENE-040718-161 zgc:92907 "zgc:92907" [Danio rerio (taxid:7955)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 75/164 (45%), Positives = 102/164 (62%)

Query:    12 RIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD 71
             + VFVTVGTT FD L+  V + E  + L +RG+T + +Q+GRG+ VP       GL  + 
Sbjct:     2 KTVFVTVGTTSFDDLIDTVTSDESVKALIQRGFTGVNLQVGRGSVVPDPE-SCPGLK-LQ 59

Query:    72 YFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR 131
              F F  SIA+ +R + LVISHAG+GS  E L   KPL+VVVN+ LMDNHQ ELA +L   
Sbjct:    60 VFRFKDSIAEDMRHSDLVISHAGAGSCLEALGANKPLLVVVNDKLMDNHQLELARQLQTD 119

Query:   132 KHL-YCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLG 174
              HL YC    +L Q +  MDL +L P+ PG+    AK +++ +G
Sbjct:   120 SHLIYCTC-STLPQTLREMDLTTLRPFAPGEPQNFAKFLDKAIG 162

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

RGD|1359416 Alg13 "asparagine-linked glycosylation 13" [Rattus norvegicus (taxid:10116)]

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 72/165 (43%), Positives = 98/165 (59%)

Query:    10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMA 69
             +KR  FVTVGTT FD LV  V   +  Q L   GY HL++Q+GRGT VP     E     
Sbjct:     1 MKR-AFVTVGTTSFDDLVARVVANDTVQILKSLGYNHLVLQIGRGTVVPEPFSTEP--FT 57

Query:    70 VDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA 129
             +D + +  S+ + L+ A LVISHAG+GS  E+L  GKPL+VVVNE LM+NHQ ELA++L 
Sbjct:    58 LDVYRYKESLKEDLQQADLVISHAGAGSCLESLEKGKPLVVVVNEKLMNNHQFELAKQLH 117

Query:   130 ARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLG 174
                HL+      L  ++  MDL +L  Y PG     +  +++ +G
Sbjct:   118 KEGHLFYCTCSMLPGLLQSMDLSTLKCYPPGQPEKFSAFLDKVVG 162

GO:0004577 "N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

UNIPROTKB|E2RPL3 LOC100856287 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 69/163 (42%), Positives = 99/163 (60%)

Query:    12 RIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD 71
             + VFVTVGTT FD LV  V   +  Q L   GY+ L++Q+GRG  VP + L  +   A+D
Sbjct:     2 KCVFVTVGTTSFDDLVACVSAHDTLQILRSLGYSRLVLQIGRGKVVP-EPLSTESF-ALD 59

Query:    72 YFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR 131
              + +  S+ + L+ A LVISHAG+GS  ETL   KPL+VVVNE LM+NHQ ELA++L   
Sbjct:    60 VYRYKDSLEEDLQKADLVISHAGAGSCLETLEKRKPLVVVVNEKLMNNHQLELAKQLHKD 119

Query:   132 KHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLG 174
              HL+     +L  ++  MDL +L  + PG     +  +++ +G
Sbjct:   120 GHLFYCTCSTLPGLLQSMDLSTLKCFPPGQPEKFSAFLDKVVG 162

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

UNIPROTKB|K7GM15 K7GM15 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 65/163 (39%), Positives = 95/163 (58%)

Query:    12 RIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD 71
             + VFVTVGTT FD L+  V   +  Q +   GY  L++Q+GRG  VP     E     +D
Sbjct:     2 KCVFVTVGTTSFDDLIACVSAHDSLQIIKSLGYNRLVLQIGRGKVVPEPFSTES--FTLD 59

Query:    72 YFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR 131
              + +  S+ + L+ A LVISHAG+GS  ETL   KPL+VV+NE LM+NHQ ELA++L   
Sbjct:    60 VYRYKDSLKEDLQKADLVISHAGAGSCLETLEKRKPLVVVINEKLMNNHQLELAKQLHKD 119

Query:   132 KHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLG 174
              HL+     +L  ++  MDL +L  + PG     +  +++ +G
Sbjct:   120 GHLFYCTCSTLPGLLQSMDLSTLKCFPPGQPEKFSAFLDKVVG 162

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

UNIPROTKB|F1MU60 F1MU60 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 69/166 (41%), Positives = 98/166 (59%)

Query:    12 RIVFVTVGTTCFDALVKAV---DTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLM 68
             + VFVTVGTT FD L+  V   D+L++ Q L   GY  L++Q+GRG  VP     E    
Sbjct:     2 KCVFVTVGTTSFDDLIACVSAHDSLQIIQSL---GYNRLVLQIGRGKVVPEPFSTES--F 56

Query:    69 AVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEEL 128
              +D + +  S+ + L+ A LVISHAG+GS  ETL   KPLIVV+NE LM+NHQ ELA++L
Sbjct:    57 TLDVYRYKDSLKEDLQKADLVISHAGAGSCLETLEKRKPLIVVINERLMNNHQLELAKQL 116

Query:   129 AARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAKLINRFLG 174
                 HL+      L  ++  MDL +L  + PG     +  +++ +G
Sbjct:   117 HKDGHLFYCTCSMLPGLLQSMDLSTLNCFPPGQPEKFSAFLDKVVG 162

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

UNIPROTKB|D6RE84 ALG13 "UDP-N-acetylglucosamine transferase subunit ALG13 homolog" [Homo sapiens (taxid:9606)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 60/126 (47%), Positives = 81/126 (64%)

Query:    12 RIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD 71
             + VFVTVGTT FD L+  V   +  Q++   GY  L++Q+GRGT VP     E     +D
Sbjct:     2 KCVFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPFSTES--FTLD 59

Query:    72 YFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR 131
              + +  S+ + ++ A LVISHAG+GS  ETL  GKPL+VV+NE LM+NHQ ELA++L   
Sbjct:    60 VYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQLELAKQLHKE 119

Query:   132 KHL-YC 136
              HL YC
Sbjct:   120 GHLFYC 125

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

MGI|MGI:1914824 Alg13 "asparagine-linked glycosylation 13" [Mus musculus (taxid:10090)]

 Score = 292 (107.8 bits), Expect = 1.9e-24, P = 1.9e-24
 Identities = 65/128 (50%), Positives = 82/128 (64%)

Query:    10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMA 69
             +KR  FVTVGTT FD LV  V   +  Q L   GY HL++Q+GRGT VP     E     
Sbjct:     1 MKR-AFVTVGTTSFDELVARVVANDCVQILESLGYNHLVLQVGRGTVVPKPFRTES--FT 57

Query:    70 VDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA 129
             +D + +  S+ + L+ A LVISHAG+GS  E+L  GKPL+VVVNE LM+NHQ ELA++L 
Sbjct:    58 LDVYRYKDSLKEDLQQADLVISHAGAGSCLESLEKGKPLVVVVNEKLMNNHQFELAKQLH 117

Query:   130 ARKHL-YC 136
                HL YC
Sbjct:   118 KEGHLFYC 125

GO:0004577 "N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

UNIPROTKB|Q9NP73 ALG13 "UDP-N-acetylglucosamine transferase subunit ALG13 homolog" [Homo sapiens (taxid:9606)]

 Score = 291 (107.5 bits), Expect = 2.4e-24, P = 2.4e-24
 Identities = 60/126 (47%), Positives = 81/126 (64%)

Query:    12 RIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD 71
             + VFVTVGTT FD L+  V   +  Q++   GY  L++Q+GRGT VP     E     +D
Sbjct:     2 KCVFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPFSTES--FTLD 59

Query:    72 YFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR 131
              + +  S+ + ++ A LVISHAG+GS  ETL  GKPL+VV+NE LM+NHQ ELA++L   
Sbjct:    60 VYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQLELAKQLHKE 119

Query:   132 KHL-YC 136
              HL YC
Sbjct:   120 GHLFYC 125

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0004577 "N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=TAS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q750J3	ALG13_ASHGO	2, ., 4, ., 1, ., 1, 4, 1	0.3247	0.9382	0.8226	yes	no
Q5I0K7	ALG13_RAT	2, ., 4, ., 1, ., 1, 4, 1	0.4337	0.9157	0.9878	yes	no
O14190	ALG13_SCHPO	2, ., 4, ., 1, ., 1, 4, 1	0.3860	0.8595	0.9444	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.921
4th Layer	2.4.1.141	0.914

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_scaffold_70000216	hypothetical protein (179 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.01460030	transferase, transferring glycosyl groups (EC-2.4.1.142) (481 aa)						•	•		0.924
	gw1.XVI.1421.1	hypothetical protein (391 aa)					•	•	•		0.913
	estExt_fgenesh4_pg.C_LG_I2082	hypothetical protein (233 aa)					•	•	•		0.418

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	178
pfam04101	167	pfam04101, Glyco_tran_28_C, Glycosyltransferase fa	1e-36
COG5017	161	COG5017, COG5017, Uncharacterized conserved protei	2e-26
COG0707	357	COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acety	1e-08
cd03785	350	cd03785, GT1_MurG, MurG is an N-acetylglucosaminyl	2e-05
COG1819	406	COG1819, COG1819, Glycosyl transferases, related t	4e-05
cd03784	401	cd03784, GT1_Gtf_like, This family includes the Gt	7e-05
PRK00726	357	PRK00726, murG, undecaprenyldiphospho-muramoylpent	0.002

>gnl|CDD|217893 pfam04101, Glyco_tran_28_C, Glycosyltransferase family 28 C-terminal domain

 Score =  124 bits (313), Expect = 1e-36
 Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 8/162 (4%)

Query: 13  IVFVTVGTTCFDALVKAVDTLEVKQELT-RRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD 71
            +FVT G+    AL + V  LEV   L  +     +L Q G+  Y P         + V+
Sbjct: 1   TIFVTGGSQGAQALNRLV--LEVDPLLELKGIEYQVLHQTGKSDYEPVNCKYSKFGINVE 58

Query: 72  YFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNE----DLMDNHQSELAEE 127
            F F  ++A+++++A LVIS AG+G+I E L  GKP I+V       +  DN+  EL + 
Sbjct: 59  VFPFIDNMAEYIKAADLVISRAGAGTIAELLALGKPAILVPRPKAAGEHQDNNALELVKA 118

Query: 128 LAARKHLY-CAHPQSLHQVIAGMDLESLLPYQPGDATPVAKL 168
            AA   L     P+ L + +  + L+ L  Y+   A   ++L
Sbjct: 119 GAALVLLQKELTPEKLVEALLKLLLKPLRLYEMNKAAKGSRL 160

The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site. Length = 167

>gnl|CDD|227350 COG5017, COG5017, Uncharacterized conserved protein [Function unknown]

 Score = 98.0 bits (244), Expect = 2e-26
 Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 12/120 (10%)

Query: 14  VFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYF 73
           +FVTVG+T F    + V  +EV  ELT      L++Q G G   P   L       V  F
Sbjct: 2   IFVTVGST-FYPFNRLVLKIEV-LELTELIQEELIVQYGNGDIKPVAGL------RVYGF 53

Query: 74  TFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNE----DLMDNHQSELAEELA 129
                I   +  A +VISHAG GSI   LR  KPLIVV       +L+D+HQ ELA +LA
Sbjct: 54  DKEEKIQSLIHDARIVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLA 113

Length = 161

>gnl|CDD|223779 COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 38/122 (31%), Positives = 51/122 (41%), Gaps = 5/122 (4%)

Query: 11  KRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAV 70
           K+ + VT G+    AL   V   E   +L  R    ++ Q G+      KS     L  V
Sbjct: 183 KKTILVTGGSQGAKALNDLV--PEALAKLANR--IQVIHQTGKNDLEELKSAYN-ELGVV 237

Query: 71  DYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA 130
               F   +A  L +A LVIS AG+ +I E L  G P I+V      D HQ   A+ L  
Sbjct: 238 RVLPFIDDMAALLAAADLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEK 297

Query: 131 RK 132
             
Sbjct: 298 AG 299

Length = 357

>gnl|CDD|99961 cd03785, GT1_MurG, MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

 Score = 43.2 bits (103), Expect = 2e-05
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 1/94 (1%)

Query: 38  ELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISHAGSGS 97
           EL R+    ++ Q G+G     K   E+  +  + F F   +A    +A LVIS AG+ +
Sbjct: 206 ELLRKRL-QVIHQTGKGDLEEVKKAYEELGVNYEVFPFIDDMAAAYAAADLVISRAGAST 264

Query: 98  IFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR 131
           + E    G P I++      D+HQ+  A  L   
Sbjct: 265 VAELAALGLPAILIPLPYAADDHQTANARALVKA 298

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 350

>gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 83  LRSASLVISHAGSGSIFETLRHGKPLIVV-VNEDLMDN 119
           L  A  VI H G+G+  E L  G PL+V+    D   N
Sbjct: 298 LPRADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPLN 335

Length = 406

>gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

 Score = 41.6 bits (98), Expect = 7e-05
 Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 21/104 (20%)

Query: 14  VFVTVGTT---CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAV 70
           V+V  G+      +AL +    +E    L +R     ++ +G G          D +  V
Sbjct: 242 VYVGFGSMVVRDPEALARLD--VEAVATLGQRA----ILSLGWGGLGAEDL--PDNVRVV 293

Query: 71  DYFTFSSSIADH---LRSASLVISHAGSGSIFETLRHGKPLIVV 111
           D+         H   L   + V+ H G+G+    LR G P +VV
Sbjct: 294 DF-------VPHDWLLPRCAAVVHHGGAGTTAAALRAGVPQLVV 330

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401

>gnl|CDD|234825 PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

 Score = 37.4 bits (88), Expect = 0.002
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 17/112 (15%)

Query: 24  DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHL 83
           +A+ +A+  L    ++      H   Q G+G     ++    G+   +   F   +A   
Sbjct: 200 EAVPEALALLPEALQVI-----H---QTGKGDLEEVRAAYAAGI-NAEVVPFIDDMAAAY 250

Query: 84  RSASLVISHAGSGSIFETLRHGKPLIVV----VNEDLMDNHQSELAEELAAR 131
            +A LVI  AG+ ++ E    G P I+V          D+HQ+  A  L   
Sbjct: 251 AAADLVICRAGASTVAELAAAGLPAILVPLPHAA----DDHQTANARALVDA 298

Length = 357

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	178
KOG3349	170	consensus Predicted glycosyltransferase [General f	99.98
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	99.97
PF04101	167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	99.96
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	99.94
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	99.87
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	99.86
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	99.84
COG5017	161	Uncharacterized conserved protein [Function unknow	99.83
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	99.82
COG4671	400	Predicted glycosyl transferase [General function p	99.81
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	99.8
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	99.79
PLN02605	382	monogalactosyldiacylglycerol synthase	99.76
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	99.76
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	99.75
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.74
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.71
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	99.69
TIGR03492	396	conserved hypothetical protein. This protein famil	99.67
PLN02210	456	UDP-glucosyl transferase	99.66
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	99.66
PLN02448	459	UDP-glycosyltransferase family protein	99.65
PLN02207	468	UDP-glycosyltransferase	99.64
PLN02562	448	UDP-glycosyltransferase	99.63
PLN02554	481	UDP-glycosyltransferase family protein	99.61
PLN03007	482	UDP-glucosyltransferase family protein	99.61
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	99.61
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	99.61
PLN02670	472	transferase, transferring glycosyl groups	99.6
PLN03004	451	UDP-glycosyltransferase	99.59
PLN02173	449	UDP-glucosyl transferase family protein	99.58
PLN02167	475	UDP-glycosyltransferase family protein	99.58
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.57
PLN02555	480	limonoid glucosyltransferase	99.56
PLN02764	453	glycosyltransferase family protein	99.56
PLN00164	480	glucosyltransferase; Provisional	99.56
PLN02152	455	indole-3-acetate beta-glucosyltransferase	99.55
PLN02992	481	coniferyl-alcohol glucosyltransferase	99.55
PLN02208	442	glycosyltransferase family protein	99.55
PLN00414	446	glycosyltransferase family protein	99.54
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.47
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	99.43
PLN03015	470	UDP-glucosyl transferase	99.42
PLN02534	491	UDP-glycosyltransferase	99.41
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	99.4
KOG1192	496	consensus UDP-glucuronosyl and UDP-glucosyl transf	99.34
PRK14089	347	ipid-A-disaccharide synthase; Provisional	99.05
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	98.99
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	98.61
cd03814	364	GT1_like_2 This family is most closely related to	98.52
cd03808	359	GT1_cap1E_like This family is most closely related	98.49
cd03823	359	GT1_ExpE7_like This family is most closely related	98.42
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	98.35
cd03801	374	GT1_YqgM_like This family is most closely related	98.33
cd04951	360	GT1_WbdM_like This family is most closely related	98.27
cd03807	365	GT1_WbnK_like This family is most closely related	98.27
cd03798	377	GT1_wlbH_like This family is most closely related	98.25
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	98.25
cd03820	348	GT1_amsD_like This family is most closely related	98.24
cd03812	358	GT1_CapH_like This family is most closely related	98.23
cd03819	355	GT1_WavL_like This family is most closely related	98.22
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	98.19
cd03794	394	GT1_wbuB_like This family is most closely related	98.17
cd03821	375	GT1_Bme6_like This family is most closely related	98.15
cd03817	374	GT1_UGDG_like This family is most closely related	98.12
cd04962	371	GT1_like_5 This family is most closely related to	98.12
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	98.11
cd03811	353	GT1_WabH_like This family is most closely related	98.1
cd03800	398	GT1_Sucrose_synthase This family is most closely r	98.09
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	98.08
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	98.07
cd03822	366	GT1_ecORF704_like This family is most closely rela	98.07
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	98.06
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	98.04
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	97.98
cd03825	365	GT1_wcfI_like This family is most closely related	97.95
cd03795	357	GT1_like_4 This family is most closely related to	97.91
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	97.89
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	97.88
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	97.87
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	97.79
PLN02275	371	transferase, transferring glycosyl groups	97.75
cd03804	351	GT1_wbaZ_like This family is most closely related	97.75
cd04949	372	GT1_gtfA_like This family is most closely related	97.73
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	97.72
cd03809	365	GT1_mtfB_like This family is most closely related	97.64
cd03796	398	GT1_PIG-A_like This family is most closely related	97.61
cd03816	415	GT1_ALG1_like This family is most closely related	97.59
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	97.43
PRK10307	412	putative glycosyl transferase; Provisional	97.43
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	97.42
cd04946	407	GT1_AmsK_like This family is most closely related	97.37
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	97.35
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	97.34
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	97.34
cd03813	475	GT1_like_3 This family is most closely related to	97.34
cd03805	392	GT1_ALG2_like This family is most closely related	97.33
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	97.32
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	97.32
cd03818	396	GT1_ExpC_like This family is most closely related	97.32
cd03802	335	GT1_AviGT4_like This family is most closely relate	97.3
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	97.26
PRK15179	694	Vi polysaccharide biosynthesis protein TviE; Provi	97.23
PHA01633	335	putative glycosyl transferase group 1	97.21
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	97.12
cd04950	373	GT1_like_1 Glycosyltransferases catalyze the trans	97.11
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	97.05
PRK15490	578	Vi polysaccharide biosynthesis protein TviE; Provi	97.05
cd04955	363	GT1_like_6 This family is most closely related to	96.87
PLN02846	462	digalactosyldiacylglycerol synthase	96.77
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	96.61
PRK00654	466	glgA glycogen synthase; Provisional	96.58
PHA01630	331	putative group 1 glycosyl transferase	96.54
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	96.39
COG3660	329	Predicted nucleoside-diphosphate-sugar epimerase [	96.16
PRK14098	489	glycogen synthase; Provisional	96.1
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	95.93
PF04464	369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	95.88
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	95.86
PLN02501	794	digalactosyldiacylglycerol synthase	95.7
cd03806	419	GT1_ALG11_like This family is most closely related	95.62
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	95.53
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	95.44
PF06722	97	DUF1205: Protein of unknown function (DUF1205); In	95.41
PRK10125	405	putative glycosyl transferase; Provisional	95.16
PRK10017	426	colanic acid biosynthesis protein; Provisional	94.92
PLN02949	463	transferase, transferring glycosyl groups	94.78
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	94.72
PF05159	269	Capsule_synth: Capsule polysaccharide biosynthesis	94.61
PF13844	468	Glyco_transf_41: Glycosyl transferase family 41; P	94.1
COG4370	412	Uncharacterized protein conserved in bacteria [Fun	94.04
PRK14099	485	glycogen synthase; Provisional	93.93
TIGR02470	784	sucr_synth sucrose synthase. This model represents	93.91
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	93.74
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	93.63
COG1817	346	Uncharacterized protein conserved in archaea [Func	93.23
PLN00142	815	sucrose synthase	93.17
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	93.07
PLN02939	977	transferase, transferring glycosyl groups	92.95
TIGR00421	181	ubiX_pad polyprenyl P-hydroxybenzoate and phenylac	92.42
TIGR02193	319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	92.3
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	92.17
PLN02316	1036	synthase/transferase	92.08
PF01075	247	Glyco_transf_9: Glycosyltransferase family 9 (hept	91.94
COG3914	620	Spy Predicted O-linked N-acetylglucosamine transfe	91.61
TIGR03713	519	acc_sec_asp1 accessory Sec system protein Asp1. Th	91.59
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	91.12
TIGR02195	334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	90.85
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	90.43
TIGR00730	178	conserved hypothetical protein, DprA/Smf-related,	90.41
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	90.25
COG0859	334	RfaF ADP-heptose:LPS heptosyltransferase [Cell env	90.19
PRK10422	352	lipopolysaccharide core biosynthesis protein; Prov	89.96
COG0438	381	RfaG Glycosyltransferase [Cell envelope biogenesis	89.88
PRK05920	204	aromatic acid decarboxylase; Validated	89.15
TIGR02919	438	accessory Sec system glycosyltransferase GtfB. Mem	88.78
TIGR02201	344	heptsyl_trn_III lipopolysaccharide heptosyltransfe	87.59
PRK10916	348	ADP-heptose:LPS heptosyltransferase II; Provisiona	86.59
TIGR03609	298	S_layer_CsaB polysaccharide pyruvyl transferase Cs	85.88
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	85.73
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	85.58
PRK09620	229	hypothetical protein; Provisional	85.3
PF10093	374	DUF2331: Uncharacterized protein conserved in bact	85.29
TIGR00732	220	dprA DNA protecting protein DprA. Disruption of th	85.19
TIGR02400	456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	85.13
PRK03372	306	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	84.41
PRK02797	322	4-alpha-L-fucosyltransferase; Provisional	83.99
cd08549	332	G1PDH_related Glycerol-1-phosphate_dehydrogenase a	83.98
COG4394	370	Uncharacterized protein conserved in bacteria [Fun	83.88
PF05014	113	Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransfer	83.63
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	83.05
PRK07313	182	phosphopantothenoylcysteine decarboxylase; Validat	83.04
PF11071	141	DUF2872: Protein of unknown function (DUF2872); In	82.69
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	82.43
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	82.35
PF13685	250	Fe-ADH_2: Iron-containing alcohol dehydrogenase; P	82.1
PRK04885	265	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	81.37
cd08191	386	HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyz	80.72
cd07766	332	DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like)	80.63
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	80.35
PRK01911	292	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	80.08

>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]

Probab=99.98  E-value=7.2e-31  Score=187.79  Aligned_cols=165  Identities=49%  Similarity=0.753  Sum_probs=146.6

Q ss_pred             CcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc-cccccc--ccCCcceEEEEeChhhHHHHhhhcc
Q 042754           11 KRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY-VPTKSL--GEDGLMAVDYFTFSSSIADHLRSAS   87 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~-~~~~~~--~~~~~~nv~v~~~~~~~~~~~~~ad   87 (178)
                      .+.+|||+||..|+.|++.+...++...|.+.++.++++|.|++.. -+....  .+...-.|..++|.|.|.+.|+.||
T Consensus         3 ~~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~Ad   82 (170)
T KOG3349|consen    3 LMTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRSAD   82 (170)
T ss_pred             ceEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHHhhcc
Confidence            5689999999889999999998999999999998899999999842 111111  1123456888999999999999999


Q ss_pred             EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChhhHHHHHHccCcccCCCCCCCChhHHHH
Q 042754           88 LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDATPVAK  167 (178)
Q Consensus        88 lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~~~i~~  167 (178)
                      +||+|||+||++|.|..|+|.|+|++...|||||.+.|+.|++.|+.+..++.+|.+.+.++.-..+++|+.++.+.+++
T Consensus        83 lVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C~ps~L~~~L~~~~~~~Lkpf~~~~~~~~~~  162 (170)
T KOG3349|consen   83 LVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYCTPSTLPAGLAKLDLESLKPFPPSDPENFSK  162 (170)
T ss_pred             EEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEeeccchHHHHHhhcccccccCCCCCCchHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999889999999999999999


Q ss_pred             HHHHhcCC
Q 042754          168 LINRFLGF  175 (178)
Q Consensus       168 ~i~~~~~~  175 (178)
                      +|.+++++
T Consensus       163 ~l~~~~~~  170 (170)
T KOG3349|consen  163 FLDAVVGL  170 (170)
T ss_pred             HHHHHhcC
Confidence            99988775

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=1.2e-29  Score=209.54  Aligned_cols=159  Identities=28%  Similarity=0.266  Sum_probs=132.9

Q ss_pred             CCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhccEE
Q 042754           10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLV   89 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~adlv   89 (178)
                      ++++|||++||+|+..+++.+  +++...+.+ ++ +++++||++........+..... +++.+|++||.++|++||+|
T Consensus       182 ~~~~ilV~GGS~Ga~~ln~~v--~~~~~~l~~-~~-~v~~~~G~~~~~~~~~~~~~~~~-~~v~~f~~dm~~~~~~ADLv  256 (357)
T COG0707         182 DKKTILVTGGSQGAKALNDLV--PEALAKLAN-RI-QVIHQTGKNDLEELKSAYNELGV-VRVLPFIDDMAALLAAADLV  256 (357)
T ss_pred             CCcEEEEECCcchhHHHHHHH--HHHHHHhhh-Ce-EEEEEcCcchHHHHHHHHhhcCc-EEEeeHHhhHHHHHHhccEE
Confidence            799999999999999999999  555666654 55 99999999873333222211222 89999999999999999999


Q ss_pred             EecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCc---------ccCC
Q 042754           90 ISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDL---------ESLL  155 (178)
Q Consensus        90 IshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~---------~~~~  155 (178)
                      |||+|++|++|++++|+|+|+||++...++||+.||++|+++|++..+     |+++|.+.|.++.+         .+.+
T Consensus       257 IsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~  336 (357)
T COG0707         257 ISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAK  336 (357)
T ss_pred             EeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            999999999999999999999999988899999999999999999753     67889999888752         3567


Q ss_pred             CCCCCChh-HHHHHHHHhc
Q 042754          156 PYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       156 ~~~~~~~~-~i~~~i~~~~  173 (178)
                      .+..++++ ++++.+++..
T Consensus       337 ~~~~p~aa~~i~~~~~~~~  355 (357)
T COG0707         337 KLGKPDAAERIADLLLALA  355 (357)
T ss_pred             hcCCCCHHHHHHHHHHHHh
Confidence            77888988 9999888754

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.96  E-value=1.8e-30  Score=193.58  Aligned_cols=139  Identities=32%  Similarity=0.416  Sum_probs=105.9

Q ss_pred             EEEEEeCCccHHHHHHHhccHHHHHHHHhC--CCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhccEEE
Q 042754           13 IVFVTVGTTCFDALVKAVDTLEVKQELTRR--GYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVI   90 (178)
Q Consensus        13 ~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~--~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~adlvI   90 (178)
                      +||||+||+|++.+.+.+...  ...+...  .+ +++++||++.+.+........+.++.+++|+++|.++|+.||+||
T Consensus         1 tilv~gGs~g~~~l~~~v~~~--~~~~~~~~~~~-~viv~~G~~~~~~~~~~~~~~~~~v~~~~~~~~m~~~m~~aDlvI   77 (167)
T PF04101_consen    1 TILVTGGSQGARDLNRLVLKI--LELLAEKHKNI-QVIVQTGKNNYEELKIKVENFNPNVKVFGFVDNMAELMAAADLVI   77 (167)
T ss_dssp             -EEEEETTTSHHHHHCCCCCH--HHHHHHHHHHC-CCCCCCTTCECHHHCCCHCCTTCCCEEECSSSSHHHHHHHHSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHH--HHHHhhcCCCc-EEEEEECCCcHHHHHHHHhccCCcEEEEechhhHHHHHHHcCEEE
Confidence            589999999999898887443  3333332  34 899999998654433222222368999999999999999999999


Q ss_pred             ecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-----eChhhHHHHHHccCcccC
Q 042754           91 SHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-----AHPQSLHQVIAGMDLESL  154 (178)
Q Consensus        91 shaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-----~~~~~L~~~i~~l~~~~~  154 (178)
                      ||||++|++|++++|+|+|+||++.+.++||..||+.+++.|++..     .+++.|.++|.++.....
T Consensus        78 s~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~  146 (167)
T PF04101_consen   78 SHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSDPE  146 (167)
T ss_dssp             ECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCHH
T ss_pred             eCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCcH
Confidence            9999999999999999999999998777899999999999999863     357889999999864433

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=99.94  E-value=3.2e-26  Score=189.42  Aligned_cols=155  Identities=21%  Similarity=0.266  Sum_probs=123.3

Q ss_pred             CCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeCh-hhHHHHhhhcc
Q 042754            9 SLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS-SSIADHLRSAS   87 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~-~~~~~~~~~ad   87 (178)
                      +++|+|||++||+|...+++.+  .+++..+.. ++ ++++|||++..+.....    ..++.+++|+ ++|+++|++||
T Consensus       183 ~~~~~iLv~GGS~Ga~~in~~~--~~~l~~l~~-~~-~vv~~~G~~~~~~~~~~----~~~~~~~~f~~~~m~~~~~~ad  254 (352)
T PRK12446        183 RKKPVITIMGGSLGAKKINETV--REALPELLL-KY-QIVHLCGKGNLDDSLQN----KEGYRQFEYVHGELPDILAITD  254 (352)
T ss_pred             CCCcEEEEECCccchHHHHHHH--HHHHHhhcc-Cc-EEEEEeCCchHHHHHhh----cCCcEEecchhhhHHHHHHhCC
Confidence            4688999999999999999888  444555533 45 99999998754332211    1255678998 68999999999


Q ss_pred             EEEecCChHHHHHHHHcCCCEEEEeCCCC-CCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCc------ccCC
Q 042754           88 LVISHAGSGSIFETLRHGKPLIVVVNEDL-MDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDL------ESLL  155 (178)
Q Consensus        88 lvIshaG~~Ti~E~l~~g~P~iviP~~~~-~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~------~~~~  155 (178)
                      ++|||||++|++|++++|+|+|++|++++ .++||..||+++++.|++..+     +++.|.+++.++..      .+.+
T Consensus       255 lvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~~~~  334 (352)
T PRK12446        255 FVISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKTALK  334 (352)
T ss_pred             EEEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHHHHH
Confidence            99999999999999999999999999743 357999999999999999743     67889988888742      3455


Q ss_pred             CCCCCChh-HHHHHHHH
Q 042754          156 PYQPGDAT-PVAKLINR  171 (178)
Q Consensus       156 ~~~~~~~~-~i~~~i~~  171 (178)
                      .+..++++ +|++.|++
T Consensus       335 ~~~~~~aa~~i~~~i~~  351 (352)
T PRK12446        335 KYNGKEAIQTIIDHISE  351 (352)
T ss_pred             HcCCCCHHHHHHHHHHh
Confidence            66777888 88888764

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=99.87  E-value=2.3e-21  Score=163.15  Aligned_cols=152  Identities=20%  Similarity=0.250  Sum_probs=119.6

Q ss_pred             CCCCCcEEEEEeCCccH-HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhh
Q 042754            7 SVSLKRIVFVTVGTTCF-DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRS   85 (178)
Q Consensus         7 ~~~~~~~ilVt~Gs~~~-~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~   85 (178)
                      .+.++|.|++|.||.+. .++.+.+     ++++.+.+. ++++.+|. ......    ..+.|+.+.+|+|+ .++++.
T Consensus       233 ~~~d~~~vyvslGt~~~~~~l~~~~-----~~a~~~l~~-~vi~~~~~-~~~~~~----~~p~n~~v~~~~p~-~~~l~~  300 (406)
T COG1819         233 IPADRPIVYVSLGTVGNAVELLAIV-----LEALADLDV-RVIVSLGG-ARDTLV----NVPDNVIVADYVPQ-LELLPR  300 (406)
T ss_pred             hcCCCCeEEEEcCCcccHHHHHHHH-----HHHHhcCCc-EEEEeccc-cccccc----cCCCceEEecCCCH-HHHhhh
Confidence            46789999999999853 3566665     677888886 99999988 322111    25689999999985 799999


Q ss_pred             ccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-----eChhhHHHHHHccCcc--------
Q 042754           86 ASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-----AHPQSLHQVIAGMDLE--------  152 (178)
Q Consensus        86 adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-----~~~~~L~~~i~~l~~~--------  152 (178)
                      ||+||||||+||++|+|++|+|+|++|..    .||..||+++++.|+|..     .+++.|.++|++++.+        
T Consensus       301 ad~vI~hGG~gtt~eaL~~gvP~vv~P~~----~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~~~~~  376 (406)
T COG1819         301 ADAVIHHGGAGTTSEALYAGVPLVVIPDG----ADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLADDSYRRAAE  376 (406)
T ss_pred             cCEEEecCCcchHHHHHHcCCCEEEecCC----cchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcCHHHHHHHH
Confidence            99999999999999999999999999986    589999999999999964     4889999999998621        


Q ss_pred             c-CCCCCCCChh-HHHHHHHHhcC
Q 042754          153 S-LLPYQPGDAT-PVAKLINRFLG  174 (178)
Q Consensus       153 ~-~~~~~~~~~~-~i~~~i~~~~~  174 (178)
                      . .+.....++. .+++.|+++..
T Consensus       377 ~~~~~~~~~~g~~~~a~~le~~~~  400 (406)
T COG1819         377 RLAEEFKEEDGPAKAADLLEEFAR  400 (406)
T ss_pred             HHHHHhhhcccHHHHHHHHHHHHh
Confidence            1 1122333334 78888888653

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=99.86  E-value=1.3e-21  Score=163.66  Aligned_cols=126  Identities=21%  Similarity=0.224  Sum_probs=102.4

Q ss_pred             CCCcEEEEEeCCccH---HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhh
Q 042754            9 SLKRIVFVTVGTTCF---DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRS   85 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~---~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~   85 (178)
                      +++|+|+||+||.+.   +.+.+.+     ++.+...+. ++++++|.......     ..+.|+.+.+|+| +..+|+.
T Consensus       237 ~~~~~v~v~~Gs~~~~~~~~~~~~~-----~~a~~~~~~-~~i~~~g~~~~~~~-----~~~~~v~~~~~~p-~~~ll~~  304 (401)
T cd03784         237 AGRPPVYVGFGSMVVRDPEALARLD-----VEAVATLGQ-RAILSLGWGGLGAE-----DLPDNVRVVDFVP-HDWLLPR  304 (401)
T ss_pred             CCCCcEEEeCCCCcccCHHHHHHHH-----HHHHHHcCC-eEEEEccCcccccc-----CCCCceEEeCCCC-HHHHhhh
Confidence            357899999999853   3455554     455555675 99999998654221     1357999999997 6899999


Q ss_pred             ccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccC
Q 042754           86 ASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMD  150 (178)
Q Consensus        86 adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~  150 (178)
                      ||++|||||+||++|++++|+|+|++|..    .||..||+++++.|++..+     ++++|.+++++++
T Consensus       305 ~d~~I~hgG~~t~~eal~~GvP~v~~P~~----~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l  370 (401)
T cd03784         305 CAAVVHHGGAGTTAAALRAGVPQLVVPFF----GDQPFWAARVAELGAGPALDPRELTAERLAAALRRLL  370 (401)
T ss_pred             hheeeecCCchhHHHHHHcCCCEEeeCCC----CCcHHHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            99999999999999999999999999986    4699999999999998642     6788999998875

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=99.84  E-value=1.6e-19  Score=146.62  Aligned_cols=121  Identities=23%  Similarity=0.309  Sum_probs=97.5

Q ss_pred             CCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhC-CCCeEEEEEeCCCcccccccccCCcceEEEEeCh-hhHHHHhhhc
Q 042754            9 SLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRR-GYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS-SSIADHLRSA   86 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~-~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~-~~~~~~~~~a   86 (178)
                      .+++.|||++|+.+.+.+.+.+         +.. ++ ++++. |......       ...|+++.+|. ++|.++|+.|
T Consensus       190 ~~~~~iLv~~gg~~~~~~~~~l---------~~~~~~-~~~v~-g~~~~~~-------~~~ni~~~~~~~~~~~~~m~~a  251 (318)
T PF13528_consen  190 EDEPKILVYFGGGGPGDLIEAL---------KALPDY-QFIVF-GPNAADP-------RPGNIHVRPFSTPDFAELMAAA  251 (318)
T ss_pred             CCCCEEEEEeCCCcHHHHHHHH---------HhCCCC-eEEEE-cCCcccc-------cCCCEEEeecChHHHHHHHHhC
Confidence            4678999999998777444333         333 33 66666 8764222       14689999998 8899999999


Q ss_pred             cEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHcc
Q 042754           87 SLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGM  149 (178)
Q Consensus        87 dlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l  149 (178)
                      |+||||||++|++|++++|+|+|++|.+.  ..+|..||+++++.|++..+     +++.|.++|+++
T Consensus       252 d~vIs~~G~~t~~Ea~~~g~P~l~ip~~~--~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~  317 (318)
T PF13528_consen  252 DLVISKGGYTTISEALALGKPALVIPRPG--QDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL  317 (318)
T ss_pred             CEEEECCCHHHHHHHHHcCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence            99999999999999999999999999874  35899999999999999753     678888888875

>COG5017 Uncharacterized conserved protein [Function unknown]

Probab=99.83  E-value=1.9e-19  Score=127.23  Aligned_cols=139  Identities=37%  Similarity=0.493  Sum_probs=104.3

Q ss_pred             EEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhccEEEec
Q 042754           13 IVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLVISH   92 (178)
Q Consensus        13 ~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~adlvIsh   92 (178)
                      ++|||+||. |..+++.+...++ ..+.+.+..++++|.|+.++.+..      ..++.-|++.+.|..++..|++||||
T Consensus         1 mifVTvGst-f~~f~rlv~k~e~-~el~~~i~e~lIvQyGn~d~kpva------gl~v~~F~~~~kiQsli~darIVISH   72 (161)
T COG5017           1 MIFVTVGST-FYPFNRLVLKIEV-LELTELIQEELIVQYGNGDIKPVA------GLRVYGFDKEEKIQSLIHDARIVISH   72 (161)
T ss_pred             CeEEEecCc-cchHHHHHhhHHH-HHHHHHhhhheeeeecCCCccccc------ccEEEeechHHHHHHHhhcceEEEec
Confidence            489999987 5555555543332 234444445899999998764422      12444455567899999999999999


Q ss_pred             CChHHHHHHHHcCCCEEEEeCCC----CCCchHHHHHHHHHhCCCEEEeCh-hh-HHHHHHccCcccCCCCCC
Q 042754           93 AGSGSIFETLRHGKPLIVVVNED----LMDNHQSELAEELAARKHLYCAHP-QS-LHQVIAGMDLESLLPYQP  159 (178)
Q Consensus        93 aG~~Ti~E~l~~g~P~iviP~~~----~~~~~Q~~nA~~l~~~G~~~~~~~-~~-L~~~i~~l~~~~~~~~~~  159 (178)
                      ||.||+..++..++|.|++|+..    ++|+||.+.|..|++.|+.+.++| +. |.+.++..-.+..++++.
T Consensus        73 aG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~spte~~L~a~l~~s~~~v~~~~~~  145 (161)
T COG5017          73 AGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACSPTELVLQAGLQVSVADVLHPFPI  145 (161)
T ss_pred             cCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEcCCchhhHHhHhhhhhhhcCCCcc
Confidence            99999999999999999999986    899999999999999999987653 33 566665554555566554

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=99.82  E-value=1.5e-19  Score=151.06  Aligned_cols=151  Identities=19%  Similarity=0.276  Sum_probs=111.9

Q ss_pred             CCCcEEEEEeCCc--cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhc
Q 042754            9 SLKRIVFVTVGTT--CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSA   86 (178)
Q Consensus         9 ~~~~~ilVt~Gs~--~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~a   86 (178)
                      .++++||||+||.  ....+.+.+     ++.+.+.++ ++++++|+.......   ...+.|+.+.+|+++ .++|++|
T Consensus       223 ~~~~~v~vs~Gs~~~~~~~~~~~~-----~~al~~~~~-~~i~~~g~~~~~~~~---~~~~~~v~~~~~~p~-~~ll~~~  292 (392)
T TIGR01426       223 DGRPVVLISLGTVFNNQPSFYRTC-----VEAFRDLDW-HVVLSVGRGVDPADL---GELPPNVEVRQWVPQ-LEILKKA  292 (392)
T ss_pred             CCCCEEEEecCccCCCCHHHHHHH-----HHHHhcCCC-eEEEEECCCCChhHh---ccCCCCeEEeCCCCH-HHHHhhC
Confidence            5689999999985  223344444     556667776 899999876432111   113568999999986 5999999


Q ss_pred             cEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCcc-----cCCC
Q 042754           87 SLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDLE-----SLLP  156 (178)
Q Consensus        87 dlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~~-----~~~~  156 (178)
                      |++|||||++|++|++++|+|+|++|..    .+|..||+++++.|++..+     ++++|.++|++++.+     +++.
T Consensus       293 ~~~I~hgG~~t~~Eal~~G~P~v~~p~~----~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~~~~  368 (392)
T TIGR01426       293 DAFITHGGMNSTMEALFNGVPMVAVPQG----ADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSDPRYAERLRK  368 (392)
T ss_pred             CEEEECCCchHHHHHHHhCCCEEecCCc----ccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHH
Confidence            9999999999999999999999999986    4799999999999999643     678899999887522     1111


Q ss_pred             ----CCCCChh-HHHHHHHHhc
Q 042754          157 ----YQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       157 ----~~~~~~~-~i~~~i~~~~  173 (178)
                          +...+.. ++++.|++++
T Consensus       369 l~~~~~~~~~~~~aa~~i~~~~  390 (392)
T TIGR01426       369 MRAEIREAGGARRAADEIEGFL  390 (392)
T ss_pred             HHHHHHHcCCHHHHHHHHHHhh
Confidence                1222333 7778777764

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=99.81  E-value=1.2e-18  Score=140.63  Aligned_cols=161  Identities=20%  Similarity=0.216  Sum_probs=115.9

Q ss_pred             CCCcEEEEEeCCc-cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccc---cccCCcceEEEEeChhhHHHHhh
Q 042754            9 SLKRIVFVTVGTT-CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKS---LGEDGLMAVDYFTFSSSIADHLR   84 (178)
Q Consensus         9 ~~~~~ilVt~Gs~-~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~---~~~~~~~nv~v~~~~~~~~~~~~   84 (178)
                      +++..||||.|+. ...+|...+  .++...+..... ++++++|++.+.....   ......++++++.|..+|..+|.
T Consensus       217 pE~~~Ilvs~GGG~dG~eLi~~~--l~A~~~l~~l~~-~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~  293 (400)
T COG4671         217 PEGFDILVSVGGGADGAELIETA--LAAAQLLAGLNH-KWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFRNDFESLLA  293 (400)
T ss_pred             CccceEEEecCCChhhHHHHHHH--HHHhhhCCCCCc-ceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHH
Confidence            5678899999864 334566666  233333333332 4999999998643221   11122478999999999999999


Q ss_pred             hccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-----eChhhHHHHHHccCccc--CCCC
Q 042754           85 SASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-----AHPQSLHQVIAGMDLES--LLPY  157 (178)
Q Consensus        85 ~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-----~~~~~L~~~i~~l~~~~--~~~~  157 (178)
                      .|+.+||.||+||++|.|++|+|+++||+.... .+|...|++++++|+.-.     ++++.|+++|..+....  -++.
T Consensus       294 gA~~vVSm~GYNTvCeILs~~k~aLivPr~~p~-eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P~~~~~~  372 (400)
T COG4671         294 GARLVVSMGGYNTVCEILSFGKPALIVPRAAPR-EEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARPSPSKPH  372 (400)
T ss_pred             hhheeeecccchhhhHHHhCCCceEEeccCCCc-HHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCCCCCccc
Confidence            999999999999999999999999999997654 489999999999999843     47888999998876421  1111


Q ss_pred             CCCChh-HHHHHHHHhc
Q 042754          158 QPGDAT-PVAKLINRFL  173 (178)
Q Consensus       158 ~~~~~~-~i~~~i~~~~  173 (178)
                      -+-+.. .++..|.+++
T Consensus       373 L~L~G~~~~a~~l~e~L  389 (400)
T COG4671         373 LDLEGLEHIARILAELL  389 (400)
T ss_pred             cCchhhHhHHHHHHHHh
Confidence            222333 6777665554

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=99.80  E-value=1.2e-18  Score=150.44  Aligned_cols=123  Identities=11%  Similarity=0.101  Sum_probs=100.1

Q ss_pred             CcEEEEEeCCcc-----HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHh--
Q 042754           11 KRIVFVTVGTTC-----FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHL--   83 (178)
Q Consensus        11 ~~~ilVt~Gs~~-----~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~--   83 (178)
                      +++|+||+||..     ..++.+.+     +++++..+. ++++.++..... .     ..+.|+.+.+|+|+ .++|  
T Consensus       296 ~g~V~vS~GS~~~~~~~~~~~~~~~-----l~a~~~l~~-~viw~~~~~~~~-~-----~~p~Nv~i~~w~Pq-~~lL~h  362 (507)
T PHA03392        296 NGVVYVSFGSSIDTNDMDNEFLQML-----LRTFKKLPY-NVLWKYDGEVEA-I-----NLPANVLTQKWFPQ-RAVLKH  362 (507)
T ss_pred             CcEEEEECCCCCcCCCCCHHHHHHH-----HHHHHhCCC-eEEEEECCCcCc-c-----cCCCceEEecCCCH-HHHhcC
Confidence            469999999963     23455555     567777776 899988854321 1     13579999999997 6888  


Q ss_pred             hhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-----eChhhHHHHHHccC
Q 042754           84 RSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-----AHPQSLHQVIAGMD  150 (178)
Q Consensus        84 ~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-----~~~~~L~~~i~~l~  150 (178)
                      ++|+++|||||.||++|++++|+|+|++|..    .||..||++++++|+|+.     .+.++|.++|++++
T Consensus       363 p~v~~fItHGG~~s~~Eal~~GvP~v~iP~~----~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl  430 (507)
T PHA03392        363 KNVKAFVTQGGVQSTDEAIDALVPMVGLPMM----GDQFYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVI  430 (507)
T ss_pred             CCCCEEEecCCcccHHHHHHcCCCEEECCCC----ccHHHHHHHHHHcCcEEEeccCCcCHHHHHHHHHHHh
Confidence            6799999999999999999999999999986    489999999999999974     37789999998885

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=99.79  E-value=4.6e-18  Score=138.95  Aligned_cols=121  Identities=18%  Similarity=0.201  Sum_probs=91.9

Q ss_pred             CCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChh-hHHHHhhhccE
Q 042754           10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSS-SIADHLRSASL   88 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~-~~~~~~~~adl   88 (178)
                      +++.|||++|+++.+.+.+.+         ...+  .+.+++|.......     ..+.|+.+++|.+ +|.++|+.||+
T Consensus       187 ~~~~iLv~~g~~~~~~l~~~l---------~~~~--~~~~i~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~ad~  250 (321)
T TIGR00661       187 GEDYILVYIGFEYRYKILELL---------GKIA--NVKFVCYSYEVAKN-----SYNENVEIRRITTDNFKELIKNAEL  250 (321)
T ss_pred             CCCcEEEECCcCCHHHHHHHH---------HhCC--CeEEEEeCCCCCcc-----ccCCCEEEEECChHHHHHHHHhCCE
Confidence            468899999998876665443         3322  34556664332111     1246899999985 89999999999


Q ss_pred             EEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChhhHHHHHHcc
Q 042754           89 VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGM  149 (178)
Q Consensus        89 vIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~~~~~L~~~i~~l  149 (178)
                      +|||||++|++|++++|+|+|++|.+.  ..||..||+.++++|+++.++..++ +.++.+
T Consensus       251 vI~~~G~~t~~Ea~~~g~P~l~ip~~~--~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~  308 (321)
T TIGR00661       251 VITHGGFSLISEALSLGKPLIVIPDLG--QFEQGNNAVKLEDLGCGIALEYKEL-RLLEAI  308 (321)
T ss_pred             EEECCChHHHHHHHHcCCCEEEEcCCC--cccHHHHHHHHHHCCCEEEcChhhH-HHHHHH
Confidence            999999999999999999999999873  4589999999999999987755555 434433

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=99.76  E-value=7.2e-18  Score=140.80  Aligned_cols=159  Identities=16%  Similarity=0.199  Sum_probs=114.6

Q ss_pred             CCCcEEEEEeCCccHHHHHHHhccHHHHHHHH-----hCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHh
Q 042754            9 SLKRIVFVTVGTTCFDALVKAVDTLEVKQELT-----RRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHL   83 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~-----~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~   83 (178)
                      +++++|++++|+.|.+.+...+  ..+...+.     ..+. +++++||.+..............++++.+|+++|+++|
T Consensus       204 ~~~~~il~~Gg~~g~~~~~~li--~~l~~~~~~~~~~~~~~-~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~~~~~~l~  280 (382)
T PLN02605        204 EDLPAVLLMGGGEGMGPLEETA--RALGDSLYDKNLGKPIG-QVVVICGRNKKLQSKLESRDWKIPVKVRGFVTNMEEWM  280 (382)
T ss_pred             CCCcEEEEECCCcccccHHHHH--HHHHHhhccccccCCCc-eEEEEECCCHHHHHHHHhhcccCCeEEEeccccHHHHH
Confidence            4678899999988766555554  11122220     2334 78889998742111111001124688999999999999


Q ss_pred             hhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChhhHHHHHHccCc----------c
Q 042754           84 RSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-AHPQSLHQVIAGMDL----------E  152 (178)
Q Consensus        84 ~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~~~~~L~~~i~~l~~----------~  152 (178)
                      ++||++|+.+|++|++|++++|+|+|+.+..   .+||..|+..+.+.|.++. .+++.|.++|.++..          .
T Consensus       281 ~aaDv~V~~~g~~ti~EAma~g~PvI~~~~~---pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~  357 (382)
T PLN02605        281 GACDCIITKAGPGTIAEALIRGLPIILNGYI---PGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSE  357 (382)
T ss_pred             HhCCEEEECCCcchHHHHHHcCCCEEEecCC---CccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHH
Confidence            9999999999999999999999999998653   3667789999999999875 488999999887742          2


Q ss_pred             cCCCCCCCChh-HHHHHHHHhc
Q 042754          153 SLLPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       153 ~~~~~~~~~~~-~i~~~i~~~~  173 (178)
                      +.+.+..++++ +|++.|.+.+
T Consensus       358 ~~~~~~~~~a~~~i~~~l~~~~  379 (382)
T PLN02605        358 NALKLARPEAVFDIVHDLHELV  379 (382)
T ss_pred             HHHHhcCCchHHHHHHHHHHHh
Confidence            33455667777 9998888764

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=99.76  E-value=8.6e-18  Score=140.85  Aligned_cols=154  Identities=14%  Similarity=0.207  Sum_probs=113.0

Q ss_pred             CCCcEEEEEeCCccH-HHHHHHhccHHHHHHHHh-CCCCeEEEEEeCCCcc--cccccccCCcceEEEEeChhhHHHHhh
Q 042754            9 SLKRIVFVTVGTTCF-DALVKAVDTLEVKQELTR-RGYTHLLIQMGRGTYV--PTKSLGEDGLMAVDYFTFSSSIADHLR   84 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~-~~l~~~~~~~~~~~~l~~-~~~~~vvv~~G~~~~~--~~~~~~~~~~~nv~v~~~~~~~~~~~~   84 (178)
                      ++++++++++|+.|. +.+...+.  .+   +.. .+. +++++||.+...  ...... ....++.+.+|+++|.++|+
T Consensus       200 ~~~~~ilv~~G~lg~~k~~~~li~--~~---~~~~~~~-~~vvv~G~~~~l~~~l~~~~-~~~~~v~~~G~~~~~~~~~~  272 (391)
T PRK13608        200 PDKQTILMSAGAFGVSKGFDTMIT--DI---LAKSANA-QVVMICGKSKELKRSLTAKF-KSNENVLILGYTKHMNEWMA  272 (391)
T ss_pred             CCCCEEEEECCCcccchhHHHHHH--HH---HhcCCCc-eEEEEcCCCHHHHHHHHHHh-ccCCCeEEEeccchHHHHHH
Confidence            467889999999874 55544441  11   122 344 888899987421  111111 12347899999999999999


Q ss_pred             hccEEEecCChHHHHHHHHcCCCEEEE-eCCCCCCchHHHHHHHHHhCCCEEEe-ChhhHHHHHHccCc---------cc
Q 042754           85 SASLVISHAGSGSIFETLRHGKPLIVV-VNEDLMDNHQSELAEELAARKHLYCA-HPQSLHQVIAGMDL---------ES  153 (178)
Q Consensus        85 ~adlvIshaG~~Ti~E~l~~g~P~ivi-P~~~~~~~~Q~~nA~~l~~~G~~~~~-~~~~L~~~i~~l~~---------~~  153 (178)
                      .||++|+++|+.|++|++++|+|+|++ |.+    ++|..|+.++.+.|+++.. +++++.++|.++.+         .+
T Consensus       273 ~aDl~I~k~gg~tl~EA~a~G~PvI~~~~~p----gqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~~~~~~m~~~  348 (391)
T PRK13608        273 SSQLMITKPGGITISEGLARCIPMIFLNPAP----GQELENALYFEEKGFGKIADTPEEAIKIVASLTNGNEQLTNMIST  348 (391)
T ss_pred             hhhEEEeCCchHHHHHHHHhCCCEEECCCCC----CcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            999999999999999999999999997 543    5688999999999999754 88889988887742         23


Q ss_pred             CCCCCCCChh-HHHHHHHHhc
Q 042754          154 LLPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       154 ~~~~~~~~~~-~i~~~i~~~~  173 (178)
                      ...+..+++. ++++.+.+.+
T Consensus       349 ~~~~~~~~s~~~i~~~l~~l~  369 (391)
T PRK13608        349 MEQDKIKYATQTICRDLLDLI  369 (391)
T ss_pred             HHHhcCCCCHHHHHHHHHHHh
Confidence            3455556666 8888887765

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=99.75  E-value=1.6e-17  Score=142.96  Aligned_cols=124  Identities=18%  Similarity=0.198  Sum_probs=91.9

Q ss_pred             CCCcEEEEEeCCccH---HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHh--
Q 042754            9 SLKRIVFVTVGTTCF---DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHL--   83 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~---~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~--   83 (178)
                      .++++|+|++||...   ....+.+     ++.+...+. ++++.+.....  ..     .+.|+.+.+|+|+ .++|  
T Consensus       274 ~~~~vv~vsfGs~~~~~~~~~~~~~-----~~~~~~~~~-~~iW~~~~~~~--~~-----l~~n~~~~~W~PQ-~~lL~h  339 (500)
T PF00201_consen  274 GKKGVVYVSFGSIVSSMPEEKLKEI-----AEAFENLPQ-RFIWKYEGEPP--EN-----LPKNVLIVKWLPQ-NDLLAH  339 (500)
T ss_dssp             TTTEEEEEE-TSSSTT-HHHHHHHH-----HHHHHCSTT-EEEEEETCSHG--CH-----HHTTEEEESS--H-HHHHTS
T ss_pred             CCCCEEEEecCcccchhHHHHHHHH-----HHHHhhCCC-ccccccccccc--cc-----ccceEEEeccccc-hhhhhc
Confidence            467899999999631   2223333     567777785 99998877322  11     2468999999998 5888  


Q ss_pred             hhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccC
Q 042754           84 RSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMD  150 (178)
Q Consensus        84 ~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~  150 (178)
                      ++.+++|||||.+|+.|++++|+|+|++|..    +||..||+++++.|+|+.+     +.++|.++|++++
T Consensus       340 p~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~----~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl  407 (500)
T PF00201_consen  340 PRVKLFITHGGLNSTQEALYHGVPMLGIPLF----GDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREVL  407 (500)
T ss_dssp             TTEEEEEES--HHHHHHHHHCT--EEE-GCS----TTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHH
T ss_pred             ccceeeeeccccchhhhhhhccCCccCCCCc----ccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHHH
Confidence            5678999999999999999999999999986    5899999999999999753     7889999999885

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=99.74  E-value=9.2e-17  Score=132.45  Aligned_cols=160  Identities=23%  Similarity=0.268  Sum_probs=116.4

Q ss_pred             CCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhccE
Q 042754            9 SLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASL   88 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~adl   88 (178)
                      ++.++|++++|+.+.+.+.+.+  .+++..+.+. . .+++++|............ .+.++++.+|++++.++|+.||+
T Consensus       181 ~~~~~i~~~gg~~~~~~~~~~l--~~a~~~~~~~-~-~~~~~~G~g~~~~~~~~~~-~~~~v~~~g~~~~~~~~~~~~d~  255 (357)
T PRK00726        181 EGKPTLLVVGGSQGARVLNEAV--PEALALLPEA-L-QVIHQTGKGDLEEVRAAYA-AGINAEVVPFIDDMAAAYAAADL  255 (357)
T ss_pred             CCCeEEEEECCcHhHHHHHHHH--HHHHHHhhhC-c-EEEEEcCCCcHHHHHHHhh-cCCcEEEeehHhhHHHHHHhCCE
Confidence            3567778877776555444444  2223444332 2 5678899876432221111 23348889999889999999999


Q ss_pred             EEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCc---------ccC
Q 042754           89 VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDL---------ESL  154 (178)
Q Consensus        89 vIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~---------~~~  154 (178)
                      +|+++|.+|++|++++|+|+|++|..+...+||..|++.+.+.|.++.+     +++.|.++|++++.         .+.
T Consensus       256 ~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~  335 (357)
T PRK00726        256 VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAA  335 (357)
T ss_pred             EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            9999999999999999999999998654557899999999999999754     38899999998752         233


Q ss_pred             CCCCCCChh-HHHHHHHHhc
Q 042754          155 LPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       155 ~~~~~~~~~-~i~~~i~~~~  173 (178)
                      +.+...++. ++++.+.+++
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~  355 (357)
T PRK00726        336 RALGKPDAAERLADLIEELA  355 (357)
T ss_pred             HhcCCcCHHHHHHHHHHHHh
Confidence            455666666 8888887764

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=99.71  E-value=2.2e-16  Score=129.35  Aligned_cols=157  Identities=25%  Similarity=0.277  Sum_probs=111.8

Q ss_pred             CCCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhcc
Q 042754            8 VSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSAS   87 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~ad   87 (178)
                      ++++++|++++|+.+.+.+.+.+  .+++..+...+. ++++++|................|+++.+|+.++.++|+.||
T Consensus       178 ~~~~~~i~~~~g~~~~~~~~~~l--~~a~~~l~~~~~-~~~~i~G~g~~~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad  254 (350)
T cd03785         178 RPGKPTLLVFGGSQGARAINEAV--PEALAELLRKRL-QVIHQTGKGDLEEVKKAYEELGVNYEVFPFIDDMAAAYAAAD  254 (350)
T ss_pred             CCCCeEEEEECCcHhHHHHHHHH--HHHHHHhhccCe-EEEEEcCCccHHHHHHHHhccCCCeEEeehhhhHHHHHHhcC
Confidence            34567788888887655444444  223444543444 677788887432211111111358999999989999999999


Q ss_pred             EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCc---------cc
Q 042754           88 LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDL---------ES  153 (178)
Q Consensus        88 lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~---------~~  153 (178)
                      ++|+++|.+|++|++++|+|+|++|.+...+++|..|++.+.+.|.++.+     +++.|.++|+++..         .+
T Consensus       255 ~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~  334 (350)
T cd03785         255 LVISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEA  334 (350)
T ss_pred             EEEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            99999999999999999999999988754568999999999999988643     68899999987742         22


Q ss_pred             CCCCCCCChh-HHHH
Q 042754          154 LLPYQPGDAT-PVAK  167 (178)
Q Consensus       154 ~~~~~~~~~~-~i~~  167 (178)
                      .+.+...++. +|++
T Consensus       335 ~~~~~~~~~~~~i~~  349 (350)
T cd03785         335 ARSLARPDAAERIAD  349 (350)
T ss_pred             HHhcCCCCHHHHHHh
Confidence            3445555555 6665

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=99.69  E-value=1.2e-16  Score=128.53  Aligned_cols=107  Identities=19%  Similarity=0.199  Sum_probs=77.9

Q ss_pred             CcEEEEEeCCccHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCcccccc-cccCCcceEEEEeChhhHHHHhhhcc
Q 042754           11 KRIVFVTVGTTCFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTKS-LGEDGLMAVDYFTFSSSIADHLRSAS   87 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~~-~~~~~~~nv~v~~~~~~~~~~~~~ad   87 (178)
                      .+.|||++|+.+...+...+     ++.+..  .++ ++.+++|++....... .......|+++++|+++|.++|+.||
T Consensus       170 ~~~iLi~~GG~d~~~~~~~~-----l~~l~~~~~~~-~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aD  243 (279)
T TIGR03590       170 LRRVLVSFGGADPDNLTLKL-----LSALAESQINI-SITLVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELMNEAD  243 (279)
T ss_pred             cCeEEEEeCCcCCcCHHHHH-----HHHHhccccCc-eEEEEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCC
Confidence            47899999865443343333     222222  344 8999999876432110 00012358999999999999999999


Q ss_pred             EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHH
Q 042754           88 LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEEL  128 (178)
Q Consensus        88 lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l  128 (178)
                      ++||+|| +|++|++++|+|+|++|..    ++|..||++|
T Consensus       244 l~Is~~G-~T~~E~~a~g~P~i~i~~~----~nQ~~~a~~~  279 (279)
T TIGR03590       244 LAIGAAG-STSWERCCLGLPSLAICLA----ENQQSNSQQL  279 (279)
T ss_pred             EEEECCc-hHHHHHHHcCCCEEEEEec----ccHHHHhhhC
Confidence            9999988 9999999999999999985    3588999864

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>TIGR03492 conserved hypothetical protein

Probab=99.67  E-value=1.3e-15  Score=128.11  Aligned_cols=156  Identities=17%  Similarity=0.139  Sum_probs=108.1

Q ss_pred             CCCcEEEEEeCCccHHHHHH--HhccHHHHHHHHh-CCCCeEEEEE-eCCCccccccccc--CC--------------cc
Q 042754            9 SLKRIVFVTVGTTCFDALVK--AVDTLEVKQELTR-RGYTHLLIQM-GRGTYVPTKSLGE--DG--------------LM   68 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~~~l~~--~~~~~~~~~~l~~-~~~~~vvv~~-G~~~~~~~~~~~~--~~--------------~~   68 (178)
                      ++.++|++.+||.+.+....  .+  .++++.+.+ .++ ++++++ |............  ..              ..
T Consensus       203 ~~~~~lllLpGSR~ae~~~~lp~~--l~al~~L~~~~~~-~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~  279 (396)
T TIGR03492       203 TGRFRIALLPGSRPPEAYRNLKLL--LRALEALPDSQPF-VFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKG  279 (396)
T ss_pred             CCCCEEEEECCCCHHHHHccHHHH--HHHHHHHhhCCCe-EEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccC
Confidence            45689999999997664433  44  334455543 355 888888 5443222110000  00              12


Q ss_pred             eEEEEeChhhHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhC----CCEEEe---Chhh
Q 042754           69 AVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR----KHLYCA---HPQS  141 (178)
Q Consensus        69 nv~v~~~~~~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~----G~~~~~---~~~~  141 (178)
                      ++++..|.++|.++|++||++|+++|+.| .|+..+|+|+|++|++    +||. ||..+++.    |.++.+   +++.
T Consensus       280 ~~~v~~~~~~~~~~l~~ADlvI~rSGt~T-~E~a~lg~P~Ilip~~----~~q~-na~~~~~~~~l~g~~~~l~~~~~~~  353 (396)
T TIGR03492       280 TLEVLLGRGAFAEILHWADLGIAMAGTAT-EQAVGLGKPVIQLPGK----GPQF-TYGFAEAQSRLLGGSVFLASKNPEQ  353 (396)
T ss_pred             ceEEEechHhHHHHHHhCCEEEECcCHHH-HHHHHhCCCEEEEeCC----CCHH-HHHHHHhhHhhcCCEEecCCCCHHH
Confidence            36777888899999999999999999877 9999999999999975    6897 99888874    655433   5678


Q ss_pred             HHHHHHccCc----------ccCCCCCCCChh-HHHHHHHHhc
Q 042754          142 LHQVIAGMDL----------ESLLPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       142 L~~~i~~l~~----------~~~~~~~~~~~~-~i~~~i~~~~  173 (178)
                      |.+.+.+++.          ...+.+..++++ ++++.|.+.+
T Consensus       354 l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~~~  396 (396)
T TIGR03492       354 AAQVVRQLLADPELLERCRRNGQERMGPPGASARIAESILKQL  396 (396)
T ss_pred             HHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhC
Confidence            8888877742          122356667787 9999887653

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>PLN02210 UDP-glucosyl transferase

Probab=99.66  E-value=1e-15  Score=130.77  Aligned_cols=130  Identities=16%  Similarity=0.156  Sum_probs=96.6

Q ss_pred             CCCcEEEEEeCCcc--HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc--ccccccccCC-cceEEEEeChhhHHHHh
Q 042754            9 SLKRIVFVTVGTTC--FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY--VPTKSLGEDG-LMAVDYFTFSSSIADHL   83 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~--~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~--~~~~~~~~~~-~~nv~v~~~~~~~~~~~   83 (178)
                      +++++|+|++||..  .....+.+     ...|...+. +++++++....  ...... ... +.+..+.+|+|+ .+++
T Consensus       267 ~~~svvyvsfGS~~~~~~~~~~e~-----a~~l~~~~~-~flw~~~~~~~~~~~~~~~-~~~~~~~g~v~~w~PQ-~~iL  338 (456)
T PLN02210        267 ARSSVVYISFGSMLESLENQVETI-----AKALKNRGV-PFLWVIRPKEKAQNVQVLQ-EMVKEGQGVVLEWSPQ-EKIL  338 (456)
T ss_pred             CCCceEEEEecccccCCHHHHHHH-----HHHHHhCCC-CEEEEEeCCccccchhhHH-hhccCCCeEEEecCCH-HHHh
Confidence            44679999999972  23334443     456667785 99998885321  111000 000 134457799998 5899


Q ss_pred             hhcc--EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEE---------eChhhHHHHHHccC
Q 042754           84 RSAS--LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-RKHLYC---------AHPQSLHQVIAGMD  150 (178)
Q Consensus        84 ~~ad--lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-~G~~~~---------~~~~~L~~~i~~l~  150 (178)
                      ++++  ++|||||.||++|++++|+|+|++|..    .||..||+++++ .|+|+.         .+.++|.++|++++
T Consensus       339 ~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~----~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m  413 (456)
T PLN02210        339 SHMAISCFVTHCGWNSTIETVVAGVPVVAYPSW----TDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVT  413 (456)
T ss_pred             cCcCcCeEEeeCCcccHHHHHHcCCCEEecccc----cccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHh
Confidence            9998  999999999999999999999999986    589999999998 799863         36788999998885

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=99.66  E-value=8.4e-16  Score=127.90  Aligned_cols=155  Identities=15%  Similarity=0.190  Sum_probs=110.5

Q ss_pred             CCCcEEEEEeCCccH-HHHHHHhccHHHHHHHHh-CCCCeEEEEEeCCCccccc--ccccCCcceEEEEeChhhHHHHhh
Q 042754            9 SLKRIVFVTVGTTCF-DALVKAVDTLEVKQELTR-RGYTHLLIQMGRGTYVPTK--SLGEDGLMAVDYFTFSSSIADHLR   84 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~-~~l~~~~~~~~~~~~l~~-~~~~~vvv~~G~~~~~~~~--~~~~~~~~nv~v~~~~~~~~~~~~   84 (178)
                      ++++++++++|+.+. +.+...+      +.+.. .++ ++++++|.+......  ......+.++++.+|++++.++|+
T Consensus       200 ~~~~~il~~~G~~~~~k~~~~li------~~l~~~~~~-~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~  272 (380)
T PRK13609        200 PNKKILLIMAGAHGVLGNVKELC------QSLMSVPDL-QVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELFR  272 (380)
T ss_pred             CCCcEEEEEcCCCCCCcCHHHHH------HHHhhCCCc-EEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHHH
Confidence            356789999998764 2333332      23332 344 888888865321111  101112358999999999999999


Q ss_pred             hccEEEecCChHHHHHHHHcCCCEEEE-eCCCCCCchHHHHHHHHHhCCCEEE-eChhhHHHHHHccCc---------cc
Q 042754           85 SASLVISHAGSGSIFETLRHGKPLIVV-VNEDLMDNHQSELAEELAARKHLYC-AHPQSLHQVIAGMDL---------ES  153 (178)
Q Consensus        85 ~adlvIshaG~~Ti~E~l~~g~P~ivi-P~~~~~~~~Q~~nA~~l~~~G~~~~-~~~~~L~~~i~~l~~---------~~  153 (178)
                      .||++|+++|+.|++|++++|+|+|+. |.+    ++|.+|+..+.+.|+++. .++++|.++|.++..         .+
T Consensus       273 ~aD~~v~~~gg~t~~EA~a~g~PvI~~~~~~----g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~~~~~~m~~~  348 (380)
T PRK13609        273 VTSCMITKPGGITLSEAAALGVPVILYKPVP----GQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDDMKLLQMKEA  348 (380)
T ss_pred             hccEEEeCCCchHHHHHHHhCCCEEECCCCC----CcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            999999999999999999999998874 433    468899999999999875 488999999888742         22


Q ss_pred             CCCCCCCChh-HHHHHHHHhcC
Q 042754          154 LLPYQPGDAT-PVAKLINRFLG  174 (178)
Q Consensus       154 ~~~~~~~~~~-~i~~~i~~~~~  174 (178)
                      .+.+..+++. ++++.+++.++
T Consensus       349 ~~~~~~~~s~~~i~~~i~~~~~  370 (380)
T PRK13609        349 MKSLYLPEPADHIVDDILAENH  370 (380)
T ss_pred             HHHhCCCchHHHHHHHHHHhhh
Confidence            3345555666 99998888764

>PLN02448 UDP-glycosyltransferase family protein

Probab=99.65  E-value=1.4e-15  Score=130.11  Aligned_cols=128  Identities=13%  Similarity=0.095  Sum_probs=94.0

Q ss_pred             CCCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhc
Q 042754            9 SLKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSA   86 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~a   86 (178)
                      +++++|+|++||...  ....+.+     +..|...+. +++++...... ....   ....|..+.+|+|+ .++|+++
T Consensus       272 ~~~~vvyvsfGs~~~~~~~~~~~~-----~~~l~~~~~-~~lw~~~~~~~-~~~~---~~~~~~~v~~w~pQ-~~iL~h~  340 (459)
T PLN02448        272 PEGSVLYVSLGSFLSVSSAQMDEI-----AAGLRDSGV-RFLWVARGEAS-RLKE---ICGDMGLVVPWCDQ-LKVLCHS  340 (459)
T ss_pred             CCCceEEEeecccccCCHHHHHHH-----HHHHHhCCC-CEEEEEcCchh-hHhH---hccCCEEEeccCCH-HHHhccC
Confidence            346799999998721  2233333     567777786 88876543211 1110   01246788899997 6899887


Q ss_pred             cE--EEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEEE----------eChhhHHHHHHccCc
Q 042754           87 SL--VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR-KHLYC----------AHPQSLHQVIAGMDL  151 (178)
Q Consensus        87 dl--vIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~-G~~~~----------~~~~~L~~~i~~l~~  151 (178)
                      ++  +|||||.||++|++++|+|+|++|..    .+|..||+++++. |+|+.          .+.++|.+++++++.
T Consensus       341 ~v~~fvtHgG~nS~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~  414 (459)
T PLN02448        341 SVGGFWTHCGWNSTLEAVFAGVPMLTFPLF----WDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMD  414 (459)
T ss_pred             ccceEEecCchhHHHHHHHcCCCEEecccc----ccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhc
Confidence            76  99999999999999999999999975    5899999999984 66643          266889999998863

>PLN02207 UDP-glycosyltransferase

Probab=99.64  E-value=2.3e-15  Score=128.60  Aligned_cols=130  Identities=19%  Similarity=0.182  Sum_probs=95.4

Q ss_pred             CCCcEEEEEeCCcc--HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc-----ccccccccCCcceEEEEeChhhHHH
Q 042754            9 SLKRIVFVTVGTTC--FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY-----VPTKSLGEDGLMAVDYFTFSSSIAD   81 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~--~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~-----~~~~~~~~~~~~nv~v~~~~~~~~~   81 (178)
                      +++.+|+|++||..  .....+.+     ...|...+. +|+++......     .+... ..+.+.|..+.+|.|+ .+
T Consensus       273 ~~~sVVyvSfGS~~~~~~~q~~el-----a~~l~~~~~-~flW~~r~~~~~~~~~lp~~f-~er~~~~g~i~~W~PQ-~~  344 (468)
T PLN02207        273 PEASVVFLCFGSMGRLRGPLVKEI-----AHGLELCQY-RFLWSLRTEEVTNDDLLPEGF-LDRVSGRGMICGWSPQ-VE  344 (468)
T ss_pred             CCCcEEEEEeccCcCCCHHHHHHH-----HHHHHHCCC-cEEEEEeCCCccccccCCHHH-HhhcCCCeEEEEeCCH-HH
Confidence            44679999999973  22233333     456667776 89998884221     01110 0112456778899998 58


Q ss_pred             HhhhccE--EEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEE------------eChhhHHHHH
Q 042754           82 HLRSASL--VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-RKHLYC------------AHPQSLHQVI  146 (178)
Q Consensus        82 ~~~~adl--vIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-~G~~~~------------~~~~~L~~~i  146 (178)
                      ++++..+  +|||||.||++|++++|+|+|.+|..    .||..||+++++ .|+|+.            .+.++|.++|
T Consensus       345 IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~----~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av  420 (468)
T PLN02207        345 ILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMY----AEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAI  420 (468)
T ss_pred             HhcccccceeeecCccccHHHHHHcCCCEEecCcc----ccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHH
Confidence            8987555  99999999999999999999999986    589999999887 788861            3678899999


Q ss_pred             HccC
Q 042754          147 AGMD  150 (178)
Q Consensus       147 ~~l~  150 (178)
                      ++++
T Consensus       421 ~~vm  424 (468)
T PLN02207        421 RCVM  424 (468)
T ss_pred             HHHH
Confidence            8886

>PLN02562 UDP-glycosyltransferase

Probab=99.63  E-value=3.4e-15  Score=127.30  Aligned_cols=128  Identities=12%  Similarity=0.122  Sum_probs=95.2

Q ss_pred             CcEEEEEeCCcc---HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc--ccccccccCCcceEEEEeChhhHHHHhhh
Q 042754           11 KRIVFVTVGTTC---FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY--VPTKSLGEDGLMAVDYFTFSSSIADHLRS   85 (178)
Q Consensus        11 ~~~ilVt~Gs~~---~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~--~~~~~~~~~~~~nv~v~~~~~~~~~~~~~   85 (178)
                      +.+|+|++||..   .....+.+     ...|...+. +++++......  .+... ..+.+.|+.+.+|+|+ .+++++
T Consensus       273 ~svvyvsfGS~~~~~~~~~~~~l-----~~~l~~~g~-~fiW~~~~~~~~~l~~~~-~~~~~~~~~v~~w~PQ-~~iL~h  344 (448)
T PLN02562        273 NSVIYISFGSWVSPIGESNVRTL-----ALALEASGR-PFIWVLNPVWREGLPPGY-VERVSKQGKVVSWAPQ-LEVLKH  344 (448)
T ss_pred             CceEEEEecccccCCCHHHHHHH-----HHHHHHCCC-CEEEEEcCCchhhCCHHH-HHHhccCEEEEecCCH-HHHhCC
Confidence            468999999963   22334444     456666775 88887754211  11110 0112457888999997 699988


Q ss_pred             cc--EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEE---eChhhHHHHHHccC
Q 042754           86 AS--LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-RKHLYC---AHPQSLHQVIAGMD  150 (178)
Q Consensus        86 ad--lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-~G~~~~---~~~~~L~~~i~~l~  150 (178)
                      ++  ++|||||.||++|++++|+|+|++|..    .||..||+++++ .|+++.   .+.+++.++|++++
T Consensus       345 ~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~----~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~~v~~~l  411 (448)
T PLN02562        345 QAVGCYLTHCGWNSTMEAIQCQKRLLCYPVA----GDQFVNCAYIVDVWKIGVRISGFGQKEVEEGLRKVM  411 (448)
T ss_pred             CccceEEecCcchhHHHHHHcCCCEEeCCcc----cchHHHHHHHHHHhCceeEeCCCCHHHHHHHHHHHh
Confidence            66  799999999999999999999999986    589999999987 488865   37889999998885

>PLN02554 UDP-glycosyltransferase family protein

Probab=99.61  E-value=2.2e-15  Score=129.53  Aligned_cols=130  Identities=17%  Similarity=0.162  Sum_probs=94.3

Q ss_pred             CCCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc----------------ccccccccCCcceE
Q 042754            9 SLKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY----------------VPTKSLGEDGLMAV   70 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~----------------~~~~~~~~~~~~nv   70 (178)
                      +.+.+|+|++||...  ....+.+     ...|...+. +++++++....                .+... ..+...|.
T Consensus       272 ~~~svvyvsfGS~~~~~~~~~~~l-----a~~l~~~~~-~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~-~~r~~~~g  344 (481)
T PLN02554        272 PPKSVVFLCFGSMGGFSEEQAREI-----AIALERSGH-RFLWSLRRASPNIMKEPPGEFTNLEEILPEGF-LDRTKDIG  344 (481)
T ss_pred             CCCcEEEEeccccccCCHHHHHHH-----HHHHHHcCC-CeEEEEcCCcccccccccccccchhhhCChHH-HHHhccCc
Confidence            345689999999721  2233333     456666775 89998864210                01000 00123567


Q ss_pred             EEEeChhhHHHHh--hhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHH-HHHhCCCEEE-----------
Q 042754           71 DYFTFSSSIADHL--RSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAE-ELAARKHLYC-----------  136 (178)
Q Consensus        71 ~v~~~~~~~~~~~--~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~-~l~~~G~~~~-----------  136 (178)
                      .+.+|+|+ .+++  +++.++|||||.||++|++++|+|+|++|..    .||+.||+ .+++.|+|+.           
T Consensus       345 ~v~~W~PQ-~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~----~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~  419 (481)
T PLN02554        345 KVIGWAPQ-VAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLY----AEQKFNAFEMVEELGLAVEIRKYWRGDLLA  419 (481)
T ss_pred             eEEeeCCH-HHHhCCcccCcccccCccchHHHHHHcCCCEEecCcc----ccchhhHHHHHHHhCceEEeeccccccccc
Confidence            78899997 5899  7888899999999999999999999999986    58999995 4778898853           


Q ss_pred             -----eChhhHHHHHHccC
Q 042754          137 -----AHPQSLHQVIAGMD  150 (178)
Q Consensus       137 -----~~~~~L~~~i~~l~  150 (178)
                           .+.+++.++|++++
T Consensus       420 ~~~~~~~~e~l~~av~~vm  438 (481)
T PLN02554        420 GEMETVTAEEIERGIRCLM  438 (481)
T ss_pred             cccCeEcHHHHHHHHHHHh
Confidence                 36788999998886

>PLN03007 UDP-glucosyltransferase family protein

Probab=99.61  E-value=3.9e-15  Score=128.02  Aligned_cols=130  Identities=10%  Similarity=0.136  Sum_probs=94.9

Q ss_pred             CCCcEEEEEeCCcc---HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc-------ccccccccCCcceEEEEeChhh
Q 042754            9 SLKRIVFVTVGTTC---FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY-------VPTKSLGEDGLMAVDYFTFSSS   78 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~---~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~-------~~~~~~~~~~~~nv~v~~~~~~   78 (178)
                      +++++|+|++||..   .+.+.+.      ...|...+. +|+++.+....       .+........+.|+.+.+|+|+
T Consensus       283 ~~~svvyvsfGS~~~~~~~~~~~~------~~~l~~~~~-~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ  355 (482)
T PLN03007        283 KPDSVIYLSFGSVASFKNEQLFEI------AAGLEGSGQ-NFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQ  355 (482)
T ss_pred             CCCceEEEeecCCcCCCHHHHHHH------HHHHHHCCC-CEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCH
Confidence            45779999999972   2233332      345666775 89999886321       0110000012458888999998


Q ss_pred             HHHHhhhccE--EEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHH---hCCCEEE-----------eChhhH
Q 042754           79 IADHLRSASL--VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA---ARKHLYC-----------AHPQSL  142 (178)
Q Consensus        79 ~~~~~~~adl--vIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~---~~G~~~~-----------~~~~~L  142 (178)
                       .++++++++  +|||||.||++|++++|+|+|++|..    .||..||++++   +.|+++.           .+.++|
T Consensus       356 -~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~----~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l  430 (482)
T PLN03007        356 -VLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVG----AEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKV  430 (482)
T ss_pred             -HHHhccCccceeeecCcchHHHHHHHcCCCeeeccch----hhhhhhHHHHHHhhcceeEeccccccccccCcccHHHH
Confidence             689999875  99999999999999999999999986    58999999886   4566641           377889


Q ss_pred             HHHHHccC
Q 042754          143 HQVIAGMD  150 (178)
Q Consensus       143 ~~~i~~l~  150 (178)
                      .++|++++
T Consensus       431 ~~av~~~m  438 (482)
T PLN03007        431 EKAVREVI  438 (482)
T ss_pred             HHHHHHHh
Confidence            99998885

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=99.61  E-value=4.7e-15  Score=126.44  Aligned_cols=130  Identities=15%  Similarity=0.177  Sum_probs=95.9

Q ss_pred             CCCCcEEEEEeCCcc---HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCC---cc-----cccccccCCcceEEEEeCh
Q 042754            8 VSLKRIVFVTVGTTC---FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGT---YV-----PTKSLGEDGLMAVDYFTFS   76 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~---~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~---~~-----~~~~~~~~~~~nv~v~~~~   76 (178)
                      .+.+.+|+|++||..   .+.+.+.      ...|...+. .++++.....   ..     +... ..+.+.|..+.+|+
T Consensus       261 ~~~~sVvyvsfGS~~~~~~~q~~el------a~gLe~s~~-~FlWv~r~~~~~~~~~~~~lp~~f-~er~~~~g~v~~w~  332 (451)
T PLN02410        261 QKKNSVIFVSLGSLALMEINEVMET------ASGLDSSNQ-QFLWVIRPGSVRGSEWIESLPKEF-SKIISGRGYIVKWA  332 (451)
T ss_pred             CCCCcEEEEEccccccCCHHHHHHH------HHHHHhcCC-CeEEEEccCcccccchhhcCChhH-HHhccCCeEEEccC
Confidence            345679999999973   2333332      345666675 8888887421   00     1110 01234677888999


Q ss_pred             hhHHHHhhh--ccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEEE----eChhhHHHHHHcc
Q 042754           77 SSIADHLRS--ASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR-KHLYC----AHPQSLHQVIAGM  149 (178)
Q Consensus        77 ~~~~~~~~~--adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~-G~~~~----~~~~~L~~~i~~l  149 (178)
                      |+ .++|++  +.++|||||.||++|++++|+|+|++|..    .||+.||+++++. |+|+.    .+.+++.++|+++
T Consensus       333 PQ-~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~----~DQ~~na~~~~~~~~~G~~~~~~~~~~~v~~av~~l  407 (451)
T PLN02410        333 PQ-KEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFS----SDQKVNARYLECVWKIGIQVEGDLDRGAVERAVKRL  407 (451)
T ss_pred             CH-HHHhCCCccCeeeecCchhHHHHHHHcCCCEEecccc----ccCHHHHHHHHHHhCeeEEeCCcccHHHHHHHHHHH
Confidence            98 689988  45599999999999999999999999986    4799999999876 88864    4888999999888


Q ss_pred             C
Q 042754          150 D  150 (178)
Q Consensus       150 ~  150 (178)
                      +
T Consensus       408 m  408 (451)
T PLN02410        408 M  408 (451)
T ss_pred             H
Confidence            5

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=99.61  E-value=6.3e-15  Score=126.41  Aligned_cols=131  Identities=17%  Similarity=0.185  Sum_probs=94.0

Q ss_pred             CCCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcc-------cccccccCCcceEEEEeChhhH
Q 042754            9 SLKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYV-------PTKSLGEDGLMAVDYFTFSSSI   79 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~-------~~~~~~~~~~~nv~v~~~~~~~   79 (178)
                      +++++|+|++||...  ....+.+     ...|...+. .++++++.....       +..........++.+.+|+|+ 
T Consensus       281 ~~~svVyvsfGS~~~~~~~~~~el-----a~gL~~~~~-~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ-  353 (477)
T PLN02863        281 EDHKVVYVCFGSQVVLTKEQMEAL-----ASGLEKSGV-HFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQ-  353 (477)
T ss_pred             CCCceEEEEeeceecCCHHHHHHH-----HHHHHhCCC-cEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCH-
Confidence            456899999999732  2223333     456777786 999999853211       000000001236788899997 


Q ss_pred             HHHhhh--ccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe--------ChhhHHHHHHc
Q 042754           80 ADHLRS--ASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-RKHLYCA--------HPQSLHQVIAG  148 (178)
Q Consensus        80 ~~~~~~--adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-~G~~~~~--------~~~~L~~~i~~  148 (178)
                      .+++++  ++++|||||.||++|++++|+|+|++|..    .||..||+++.+ .|+|+..        +.+++.+++.+
T Consensus       354 ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~----~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~  429 (477)
T PLN02863        354 VAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMA----ADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFME  429 (477)
T ss_pred             HHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCcc----ccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHH
Confidence            588876  88999999999999999999999999986    489999999765 6888643        56778888876


Q ss_pred             cC
Q 042754          149 MD  150 (178)
Q Consensus       149 l~  150 (178)
                      +.
T Consensus       430 ~m  431 (477)
T PLN02863        430 SV  431 (477)
T ss_pred             Hh
Confidence            53

>PLN02670 transferase, transferring glycosyl groups

Probab=99.60  E-value=1.4e-14  Score=123.91  Aligned_cols=131  Identities=17%  Similarity=0.165  Sum_probs=93.1

Q ss_pred             CCCcEEEEEeCCcc-H-HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc---cc-----ccCCcceEEEEeChhh
Q 042754            9 SLKRIVFVTVGTTC-F-DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK---SL-----GEDGLMAVDYFTFSSS   78 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~-~-~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~---~~-----~~~~~~nv~v~~~~~~   78 (178)
                      +++.+|+|++||.. . ..-.+.+     ...|...+. .|+++..........   ..     .......+.+.+|+|+
T Consensus       276 ~~~sVvyvsfGS~~~l~~~q~~el-----a~gl~~s~~-~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ  349 (472)
T PLN02670        276 RVNSVVYVALGTEASLRREEVTEL-----ALGLEKSET-PFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQ  349 (472)
T ss_pred             CCCceEEEEecccccCCHHHHHHH-----HHHHHHCCC-CEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCH
Confidence            44689999999973 1 1222222     446666675 888887642110000   00     0000112677799998


Q ss_pred             HHHHhhhccE--EEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---------ChhhHHHHHH
Q 042754           79 IADHLRSASL--VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---------HPQSLHQVIA  147 (178)
Q Consensus        79 ~~~~~~~adl--vIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---------~~~~L~~~i~  147 (178)
                       .+++++.++  +|||||.||++|++++|+|+|.+|..    .||..||+++++.|+|+.+         +.+++.++|+
T Consensus       350 -~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~----~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~  424 (472)
T PLN02670        350 -VKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVL----NEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVR  424 (472)
T ss_pred             -HHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcch----hccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHH
Confidence             589977665  99999999999999999999999976    5899999999999999643         5788999999


Q ss_pred             ccC
Q 042754          148 GMD  150 (178)
Q Consensus       148 ~l~  150 (178)
                      +++
T Consensus       425 ~vm  427 (472)
T PLN02670        425 LAM  427 (472)
T ss_pred             HHh
Confidence            886

>PLN03004 UDP-glycosyltransferase

Probab=99.59  E-value=1.3e-14  Score=123.57  Aligned_cols=132  Identities=15%  Similarity=0.170  Sum_probs=96.7

Q ss_pred             CCCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc-----------ccccccccCCcceEEEEeC
Q 042754            9 SLKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY-----------VPTKSLGEDGLMAVDYFTF   75 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~-----------~~~~~~~~~~~~nv~v~~~   75 (178)
                      +++.+|+|++||...  ....+.+     ...|...+. .|+++......           .+..........|+.+.+|
T Consensus       268 ~~~sVvyvsfGS~~~~~~~q~~el-----a~gL~~s~~-~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W  341 (451)
T PLN03004        268 PEKSVVFLCFGSLGLFSKEQVIEI-----AVGLEKSGQ-RFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSW  341 (451)
T ss_pred             CCCceEEEEecccccCCHHHHHHH-----HHHHHHCCC-CEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEee
Confidence            456799999999732  2222232     345666675 89998874210           0100000011257888999


Q ss_pred             hhhHHHHhhhccE--EEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe--------ChhhHHH
Q 042754           76 SSSIADHLRSASL--VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-RKHLYCA--------HPQSLHQ  144 (178)
Q Consensus        76 ~~~~~~~~~~adl--vIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-~G~~~~~--------~~~~L~~  144 (178)
                      +|+ .++++++++  +|||||.||++|++++|||+|.+|..    .||..||+++++ .|+|+.+        +.+++.+
T Consensus       342 ~PQ-~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~----~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~  416 (451)
T PLN03004        342 APQ-VPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLY----AEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEK  416 (451)
T ss_pred             CCH-HHHhCCCccceEeccCcchHHHHHHHcCCCEEecccc----ccchhhHHHHHHHhCceEEecCCcCCccCHHHHHH
Confidence            998 589999998  99999999999999999999999986    489999999986 5988632        6788999


Q ss_pred             HHHccCc
Q 042754          145 VIAGMDL  151 (178)
Q Consensus       145 ~i~~l~~  151 (178)
                      +|++++.
T Consensus       417 av~~vm~  423 (451)
T PLN03004        417 RVQEIIG  423 (451)
T ss_pred             HHHHHhc
Confidence            9999863

>PLN02173 UDP-glucosyl transferase family protein

Probab=99.58  E-value=1.6e-14  Score=122.90  Aligned_cols=129  Identities=14%  Similarity=0.182  Sum_probs=90.4

Q ss_pred             CCCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCC--CcccccccccCCcceEEEEeChhhHHHHhh
Q 042754            9 SLKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRG--TYVPTKSLGEDGLMAVDYFTFSSSIADHLR   84 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~--~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~   84 (178)
                      +++.+|+|++||...  .+..+.+     ...|.  +. .++++.-..  ...+........+.|+.+.+|.|+ .++++
T Consensus       262 ~~~svvyvsfGS~~~~~~~~~~el-----a~gLs--~~-~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ-~~iL~  332 (449)
T PLN02173        262 PQGSVVYIAFGSMAKLSSEQMEEI-----ASAIS--NF-SYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQ-LQVLS  332 (449)
T ss_pred             CCCceEEEEecccccCCHHHHHHH-----HHHhc--CC-CEEEEEeccchhcccchHHHhhcCCceEEeCCCCH-HHHhC
Confidence            345699999999732  2222222     33453  33 566665421  111111100011357888999998 58998


Q ss_pred             hcc--EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEEEe---------ChhhHHHHHHccC
Q 042754           85 SAS--LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR-KHLYCA---------HPQSLHQVIAGMD  150 (178)
Q Consensus        85 ~ad--lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~-G~~~~~---------~~~~L~~~i~~l~  150 (178)
                      +++  ++|||||.||++|++++|+|+|++|..    .||..||+++++. |+|+.+         +.+++.+++++++
T Consensus       333 H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~----~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm  406 (449)
T PLN02173        333 NKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQW----TDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVM  406 (449)
T ss_pred             CCccceEEecCccchHHHHHHcCCCEEecCch----hcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHh
Confidence            877  999999999999999999999999986    5899999999975 777532         6788999999885

>PLN02167 UDP-glycosyltransferase family protein

Probab=99.58  E-value=1.3e-14  Score=124.54  Aligned_cols=131  Identities=16%  Similarity=0.161  Sum_probs=92.0

Q ss_pred             CCCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcc---cccccc----cCCcceEEEEeChhhH
Q 042754            9 SLKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYV---PTKSLG----EDGLMAVDYFTFSSSI   79 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~---~~~~~~----~~~~~nv~v~~~~~~~   79 (178)
                      +.+++|+|++||...  ....+.+     ...|...+. +++++.+.....   ......    .+...+..+.+|+|+ 
T Consensus       278 ~~~svvyvsfGS~~~~~~~~~~el-----a~~l~~~~~-~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ-  350 (475)
T PLN02167        278 PESSVVFLCFGSLGSLPAPQIKEI-----AQALELVGC-RFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQ-  350 (475)
T ss_pred             CCCceEEEeecccccCCHHHHHHH-----HHHHHhCCC-cEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCH-
Confidence            446799999999732  1222222     456666775 999988753110   000000    001122467799997 


Q ss_pred             HHHhhh--ccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHH-HHhCCCEEE------------eChhhHHH
Q 042754           80 ADHLRS--ASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEE-LAARKHLYC------------AHPQSLHQ  144 (178)
Q Consensus        80 ~~~~~~--adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~-l~~~G~~~~------------~~~~~L~~  144 (178)
                      .+++++  ++++|||||.||++|++++|+|+|++|..    .||..||++ +++.|+|+.            .+.+++.+
T Consensus       351 ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~----~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~  426 (475)
T PLN02167        351 VEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMY----AEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAG  426 (475)
T ss_pred             HHHhcCcccCeEEeeCCcccHHHHHHcCCCEEecccc----ccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHH
Confidence            689977  66899999999999999999999999986    489999986 677898863            26678888


Q ss_pred             HHHccC
Q 042754          145 VIAGMD  150 (178)
Q Consensus       145 ~i~~l~  150 (178)
                      +|++++
T Consensus       427 av~~~m  432 (475)
T PLN02167        427 AVRSLM  432 (475)
T ss_pred             HHHHHh
Confidence            888875

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=99.57  E-value=3.7e-14  Score=116.08  Aligned_cols=155  Identities=23%  Similarity=0.220  Sum_probs=102.6

Q ss_pred             CCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCc-ceEEEEeChhhHHHHhhhcc
Q 042754            9 SLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGL-MAVDYFTFSSSIADHLRSAS   87 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~-~nv~v~~~~~~~~~~~~~ad   87 (178)
                      ++.++|++++|+.+.+.+.+.+  ..++..+.+.+. ++++++|.+............+ .++..+.+. ++.++|+.||
T Consensus       177 ~~~~~i~~~gg~~~~~~~~~~l--~~a~~~l~~~~~-~~~~~~g~~~~~~l~~~~~~~~l~~~v~~~~~-~~~~~l~~ad  252 (348)
T TIGR01133       177 EGKPTILVLGGSQGAKILNELV--PKALAKLAEKGI-QIVHQTGKNDLEKVKNVYQELGIEAIVTFIDE-NMAAAYAAAD  252 (348)
T ss_pred             CCCeEEEEECCchhHHHHHHHH--HHHHHHHhhcCc-EEEEECCcchHHHHHHHHhhCCceEEecCccc-CHHHHHHhCC
Confidence            3556777777787765555544  233445544454 7777788764321111011111 122222222 7999999999


Q ss_pred             EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCc---------cc
Q 042754           88 LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDL---------ES  153 (178)
Q Consensus        88 lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~---------~~  153 (178)
                      ++|+++|.+|++|++++|+|+|++|.+... ++|..|++.+.+.+.|+..     +++.|.++++++..         .+
T Consensus       253 ~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~-~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~  331 (348)
T TIGR01133       253 LVISRAGASTVAELAAAGVPAILIPYPYAA-DDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEA  331 (348)
T ss_pred             EEEECCChhHHHHHHHcCCCEEEeeCCCCc-cchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            999999989999999999999999876543 4689999999999888753     38899999988752         23


Q ss_pred             CCCCCCCChh-HHHHH
Q 042754          154 LLPYQPGDAT-PVAKL  168 (178)
Q Consensus       154 ~~~~~~~~~~-~i~~~  168 (178)
                      .+.+..+++. ++++.
T Consensus       332 ~~~~~~~~~~~~i~~~  347 (348)
T TIGR01133       332 ARKLAKPDAAKRIAEL  347 (348)
T ss_pred             HHhcCCccHHHHHHhh
Confidence            3455555555 66654

RL J Bacteriol 1993 Mar;175(6):1841-3

>PLN02555 limonoid glucosyltransferase

Probab=99.56  E-value=5.3e-14  Score=120.72  Aligned_cols=129  Identities=16%  Similarity=0.199  Sum_probs=93.7

Q ss_pred             CCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc--------ccccccccCCcceEEEEeChhhH
Q 042754           10 LKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY--------VPTKSLGEDGLMAVDYFTFSSSI   79 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~--------~~~~~~~~~~~~nv~v~~~~~~~   79 (178)
                      .+.+|+|++||...  ....+.+     ...|...+. +++++......        .+... ..+.+.|..+.+|+|+ 
T Consensus       276 ~~sVvyvsfGS~~~~~~~q~~el-----a~~l~~~~~-~flW~~~~~~~~~~~~~~~lp~~~-~~~~~~~g~v~~W~PQ-  347 (480)
T PLN02555        276 PSSVVYISFGTVVYLKQEQIDEI-----AYGVLNSGV-SFLWVMRPPHKDSGVEPHVLPEEF-LEKAGDKGKIVQWCPQ-  347 (480)
T ss_pred             CCceeEEEeccccCCCHHHHHHH-----HHHHHhcCC-eEEEEEecCcccccchhhcCChhh-hhhcCCceEEEecCCH-
Confidence            34589999999631  2222222     345556675 88888763210        11110 0122357888899997 


Q ss_pred             HHHh--hhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEEEe----------ChhhHHHHH
Q 042754           80 ADHL--RSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR-KHLYCA----------HPQSLHQVI  146 (178)
Q Consensus        80 ~~~~--~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~-G~~~~~----------~~~~L~~~i  146 (178)
                      .+++  +++.++|||||.||++|++++|+|+|.+|..    .||..||+++++. |+|+.+          +.+++.++|
T Consensus       348 ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~----~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v  423 (480)
T PLN02555        348 EKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQW----GDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECL  423 (480)
T ss_pred             HHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCc----cccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHH
Confidence            6888  7799999999999999999999999999986    4899999999987 988643          567888888


Q ss_pred             HccC
Q 042754          147 AGMD  150 (178)
Q Consensus       147 ~~l~  150 (178)
                      +++.
T Consensus       424 ~~vm  427 (480)
T PLN02555        424 LEAT  427 (480)
T ss_pred             HHHh
Confidence            8875

>PLN02764 glycosyltransferase family protein

Probab=99.56  E-value=6.8e-14  Score=119.10  Aligned_cols=132  Identities=17%  Similarity=0.166  Sum_probs=90.5

Q ss_pred             CCCCCcEEEEEeCCcc---HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCC--Cc-----ccccccccCCcceEEEEeCh
Q 042754            7 SVSLKRIVFVTVGTTC---FDALVKAVDTLEVKQELTRRGYTHLLIQMGRG--TY-----VPTKSLGEDGLMAVDYFTFS   76 (178)
Q Consensus         7 ~~~~~~~ilVt~Gs~~---~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~--~~-----~~~~~~~~~~~~nv~v~~~~   76 (178)
                      ..+++.+|+|++||..   .+.+.+..      ..|...+. .++++....  ..     .+...........+.+.+|+
T Consensus       253 ~q~~~sVvyvsfGS~~~~~~~q~~ela------~gL~~s~~-pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~  325 (453)
T PLN02764        253 GYEPDSVVFCALGSQVILEKDQFQELC------LGMELTGS-PFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWV  325 (453)
T ss_pred             CCCCCceEEEeecccccCCHHHHHHHH------HHHHhCCC-CeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCC
Confidence            4456789999999973   33444443      23333343 444444421  10     11110000012346777999


Q ss_pred             hhHHHHhhh--ccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEE--------eChhhHHHH
Q 042754           77 SSIADHLRS--ASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-RKHLYC--------AHPQSLHQV  145 (178)
Q Consensus        77 ~~~~~~~~~--adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-~G~~~~--------~~~~~L~~~  145 (178)
                      |+ .+++++  +.++|||||.||++|++++|+|+|++|..    .||..||+++++ .|+++.        .+.+++.++
T Consensus       326 PQ-~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~----~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~a  400 (453)
T PLN02764        326 QQ-PLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQL----GDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDA  400 (453)
T ss_pred             CH-HHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcc----cchHHHHHHHHHHhceEEEeccccCCccCHHHHHHH
Confidence            98 589977  56699999999999999999999999986    589999999964 788864        377889999


Q ss_pred             HHccC
Q 042754          146 IAGMD  150 (178)
Q Consensus       146 i~~l~  150 (178)
                      +++++
T Consensus       401 v~~vm  405 (453)
T PLN02764        401 INSVM  405 (453)
T ss_pred             HHHHh
Confidence            98886

>PLN00164 glucosyltransferase; Provisional

Probab=99.56  E-value=3.3e-14  Score=122.19  Aligned_cols=130  Identities=22%  Similarity=0.256  Sum_probs=91.0

Q ss_pred             CCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc-------c-cccc-c--c---cCCcceEEEE
Q 042754           10 LKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY-------V-PTKS-L--G---EDGLMAVDYF   73 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~-------~-~~~~-~--~---~~~~~nv~v~   73 (178)
                      .+.+|+|++||...  ..-.+.+     ...|...+. +++++......       . .... .  .   ......+.+.
T Consensus       271 ~~svvyvsfGS~~~~~~~q~~el-----a~gL~~s~~-~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~  344 (480)
T PLN00164        271 PASVVFLCFGSMGFFDAPQVREI-----AAGLERSGH-RFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWP  344 (480)
T ss_pred             CCceEEEEecccccCCHHHHHHH-----HHHHHHcCC-CEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEe
Confidence            45789999999632  1112222     456666675 88877763210       0 0000 0  0   0011236677


Q ss_pred             eChhhHHHHhhhcc--EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe----------Chh
Q 042754           74 TFSSSIADHLRSAS--LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-RKHLYCA----------HPQ  140 (178)
Q Consensus        74 ~~~~~~~~~~~~ad--lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-~G~~~~~----------~~~  140 (178)
                      +|.|+ .+++++++  ++|||||.||++|++++|+|+|++|..    .||..||+++.+ .|+|+.+          +.+
T Consensus       345 ~w~PQ-~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~----~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e  419 (480)
T PLN00164        345 TWAPQ-KEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLY----AEQHLNAFELVADMGVAVAMKVDRKRDNFVEAA  419 (480)
T ss_pred             ecCCH-HHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCcc----ccchhHHHHHHHHhCeEEEeccccccCCcCcHH
Confidence            99998 68999887  799999999999999999999999986    589999998854 7988642          568


Q ss_pred             hHHHHHHccC
Q 042754          141 SLHQVIAGMD  150 (178)
Q Consensus       141 ~L~~~i~~l~  150 (178)
                      ++.++|++++
T Consensus       420 ~l~~av~~vm  429 (480)
T PLN00164        420 ELERAVRSLM  429 (480)
T ss_pred             HHHHHHHHHh
Confidence            8999998875

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=99.55  E-value=5.1e-14  Score=120.08  Aligned_cols=130  Identities=15%  Similarity=0.174  Sum_probs=93.6

Q ss_pred             CCCcEEEEEeCCcc---HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc-------ccc-c---ccc--cCCcceEEE
Q 042754            9 SLKRIVFVTVGTTC---FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY-------VPT-K---SLG--EDGLMAVDY   72 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~---~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~-------~~~-~---~~~--~~~~~nv~v   72 (178)
                      +.+.+|+|++||..   .+.+. .+     ...|...+. .|+++......       ... .   ...  .+.+.|..+
T Consensus       259 ~~~sVvyvsfGS~~~l~~~q~~-el-----a~gL~~s~~-~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v  331 (455)
T PLN02152        259 TESSVIYVSFGTMVELSKKQIE-EL-----ARALIEGKR-PFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMI  331 (455)
T ss_pred             CCCceEEEEecccccCCHHHHH-HH-----HHHHHHcCC-CeEEEEecCcccccccccccccccccchhHHHhccCCeEE
Confidence            44689999999973   22222 22     345556675 88888864210       000 0   000  113456788


Q ss_pred             EeChhhHHHHhhhcc--EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh---CCCEEE------eChhh
Q 042754           73 FTFSSSIADHLRSAS--LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA---RKHLYC------AHPQS  141 (178)
Q Consensus        73 ~~~~~~~~~~~~~ad--lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~---~G~~~~------~~~~~  141 (178)
                      .+|+|++ +++++++  ++|||||.||++|++++|+|+|++|..    .||..||+++++   .|+++.      .+.++
T Consensus       332 ~~W~PQ~-~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~----~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~  406 (455)
T PLN02152        332 VSWCSQI-EVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMW----SDQPANAKLLEEIWKTGVRVRENSEGLVERGE  406 (455)
T ss_pred             EeeCCHH-HHhCCcccceEEeeCCcccHHHHHHcCCCEEecccc----ccchHHHHHHHHHhCceEEeecCcCCcCcHHH
Confidence            8999984 8998888  699999999999999999999999986    589999999998   455542      37788


Q ss_pred             HHHHHHccC
Q 042754          142 LHQVIAGMD  150 (178)
Q Consensus       142 L~~~i~~l~  150 (178)
                      +.++|++++
T Consensus       407 l~~av~~vm  415 (455)
T PLN02152        407 IRRCLEAVM  415 (455)
T ss_pred             HHHHHHHHH
Confidence            999999886

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=99.55  E-value=4.2e-14  Score=121.25  Aligned_cols=131  Identities=11%  Similarity=0.115  Sum_probs=93.2

Q ss_pred             CCCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCC-----------------c-----cccccccc
Q 042754            9 SLKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRGT-----------------Y-----VPTKSLGE   64 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~-----------------~-----~~~~~~~~   64 (178)
                      +.+.+|+|++||...  ..-.+.+     ...|...+. .|+++..+..                 .     .+......
T Consensus       261 ~~~sVvyvsfGS~~~l~~~q~~el-----a~gL~~s~~-~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR  334 (481)
T PLN02992        261 PNESVLYISFGSGGSLSAKQLTEL-----AWGLEMSQQ-RFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSR  334 (481)
T ss_pred             CCCceEEEeecccccCCHHHHHHH-----HHHHHHcCC-CEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHH
Confidence            346799999999732  2222222     345666675 8888884210                 0     00000000


Q ss_pred             CCcceEEEEeChhhHHHHhhhccE--EEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHH-hCCCEEE-----
Q 042754           65 DGLMAVDYFTFSSSIADHLRSASL--VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA-ARKHLYC-----  136 (178)
Q Consensus        65 ~~~~nv~v~~~~~~~~~~~~~adl--vIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~-~~G~~~~-----  136 (178)
                      ....++.+.+|+|+ .++++++.+  +|||||.||++|++++|+|+|.+|..    .||..||++++ +.|+++.     
T Consensus       335 ~~~rg~vv~~W~PQ-~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~----~DQ~~na~~~~~~~g~gv~~~~~~  409 (481)
T PLN02992        335 THDRGFVVPSWAPQ-AEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLF----AEQNMNAALLSDELGIAVRSDDPK  409 (481)
T ss_pred             hcCCCEEEeecCCH-HHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCcc----chhHHHHHHHHHHhCeeEEecCCC
Confidence            01235888899998 589988885  99999999999999999999999986    58999999995 8899864     


Q ss_pred             --eChhhHHHHHHccC
Q 042754          137 --AHPQSLHQVIAGMD  150 (178)
Q Consensus       137 --~~~~~L~~~i~~l~  150 (178)
                        .+.+++.++|++++
T Consensus       410 ~~~~~~~l~~av~~vm  425 (481)
T PLN02992        410 EVISRSKIEALVRKVM  425 (481)
T ss_pred             CcccHHHHHHHHHHHh
Confidence              36678889888875

>PLN02208 glycosyltransferase family protein

Probab=99.55  E-value=6.5e-14  Score=119.17  Aligned_cols=132  Identities=18%  Similarity=0.205  Sum_probs=90.9

Q ss_pred             CCCCcEEEEEeCCcc---HHHHHHHhccHHHHH-HHHhCCCCeEEEEEeCCC--c---ccccccccCCcceEEEEeChhh
Q 042754            8 VSLKRIVFVTVGTTC---FDALVKAVDTLEVKQ-ELTRRGYTHLLIQMGRGT--Y---VPTKSLGEDGLMAVDYFTFSSS   78 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~---~~~l~~~~~~~~~~~-~l~~~~~~~vvv~~G~~~--~---~~~~~~~~~~~~nv~v~~~~~~   78 (178)
                      .+++.+|+|++||..   .+.+.+..     .. ++...++ .+++..+...  .   .+..........|+.+.+|.|+
T Consensus       248 ~~~~sVvyvSfGS~~~l~~~q~~e~~-----~~l~~s~~pf-~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ  321 (442)
T PLN02208        248 FPPKSVVFCSLGSQIILEKDQFQELC-----LGMELTGLPF-LIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQ  321 (442)
T ss_pred             CCCCcEEEEeccccccCCHHHHHHHH-----HHHHhCCCcE-EEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCH
Confidence            345689999999973   33354444     22 2344444 5555543111  0   1100000001247888899998


Q ss_pred             HHHHhhhcc--EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEE--------eChhhHHHHHH
Q 042754           79 IADHLRSAS--LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-RKHLYC--------AHPQSLHQVIA  147 (178)
Q Consensus        79 ~~~~~~~ad--lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-~G~~~~--------~~~~~L~~~i~  147 (178)
                       .+++++.+  ++|||||.||++|++++|+|+|.+|..    .||..||+++.+ .|+|+.        .+.+++.++|+
T Consensus       322 -~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~----~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~  396 (442)
T PLN02208        322 -PLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFL----SDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIK  396 (442)
T ss_pred             -HHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcc----hhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHH
Confidence             58887776  699999999999999999999999986    589999998776 788863        36788999998


Q ss_pred             ccC
Q 042754          148 GMD  150 (178)
Q Consensus       148 ~l~  150 (178)
                      ++.
T Consensus       397 ~~m  399 (442)
T PLN02208        397 SVM  399 (442)
T ss_pred             HHh
Confidence            875

>PLN00414 glycosyltransferase family protein

Probab=99.54  E-value=1.1e-13  Score=117.88  Aligned_cols=132  Identities=16%  Similarity=0.167  Sum_probs=90.1

Q ss_pred             CCCCCcEEEEEeCCcc---HHHHHHHhccHHHHHHHHhCCCCeEEEEEeC----CC---cccccccccCCcceEEEEeCh
Q 042754            7 SVSLKRIVFVTVGTTC---FDALVKAVDTLEVKQELTRRGYTHLLIQMGR----GT---YVPTKSLGEDGLMAVDYFTFS   76 (178)
Q Consensus         7 ~~~~~~~ilVt~Gs~~---~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~----~~---~~~~~~~~~~~~~nv~v~~~~   76 (178)
                      ..+++.+|+|++||..   .+.+.+..      ..|...+. .++++.-.    ..   ..+......-......+.+|+
T Consensus       248 ~q~~~sVvyvsfGS~~~~~~~q~~e~a------~gL~~s~~-~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~  320 (446)
T PLN00414        248 GFEPGSVVFCAFGTQFFFEKDQFQEFC------LGMELTGL-PFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWV  320 (446)
T ss_pred             cCCCCceEEEeecccccCCHHHHHHHH------HHHHHcCC-CeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccC
Confidence            3456789999999973   23454443      23334453 55444432    11   011110000011245556999


Q ss_pred             hhHHHHhhhc--cEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHH-hCCCEEE--------eChhhHHHH
Q 042754           77 SSIADHLRSA--SLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA-ARKHLYC--------AHPQSLHQV  145 (178)
Q Consensus        77 ~~~~~~~~~a--dlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~-~~G~~~~--------~~~~~L~~~  145 (178)
                      |+ .++++++  +++|||||.||++|++++|+|+|++|..    .||..||++++ +.|+++.        .+.+++.++
T Consensus       321 PQ-~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~----~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~  395 (446)
T PLN00414        321 EQ-PLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQL----ADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDT  395 (446)
T ss_pred             CH-HHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcc----cchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHH
Confidence            98 5899777  6799999999999999999999999986    58999999996 5798863        377889999


Q ss_pred             HHccC
Q 042754          146 IAGMD  150 (178)
Q Consensus       146 i~~l~  150 (178)
                      +++++
T Consensus       396 v~~~m  400 (446)
T PLN00414        396 VKSVM  400 (446)
T ss_pred             HHHHh
Confidence            98886

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=99.47  E-value=7.8e-14  Score=116.87  Aligned_cols=142  Identities=12%  Similarity=0.071  Sum_probs=94.8

Q ss_pred             CCCCcEEEEEeCCccHH--HHHHHhccHHHHHHHHhC--CCCeEEEEEeCCCcccc-cccccCCcceEEEEeChhhHHHH
Q 042754            8 VSLKRIVFVTVGTTCFD--ALVKAVDTLEVKQELTRR--GYTHLLIQMGRGTYVPT-KSLGEDGLMAVDYFTFSSSIADH   82 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~~~--~l~~~~~~~~~~~~l~~~--~~~~vvv~~G~~~~~~~-~~~~~~~~~nv~v~~~~~~~~~~   82 (178)
                      ++++++|++.+||.+.+  .++..+  .++++.+.+.  +. ++++..+....... .........+..+..+..++..+
T Consensus       188 ~~~~~~Ilvl~GSR~aei~k~~~~l--l~a~~~l~~~~p~~-~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  264 (385)
T TIGR00215       188 DHNGETLALLPGSRGSEVEKLFPLF--LKAAQLLEQQEPDL-RRVLPVVNFKRRLQFEQIKAEYGPDLQLHLIDGDARKA  264 (385)
T ss_pred             CCCCCEEEEECCCCHHHHHHhHHHH--HHHHHHHHHhCCCe-EEEEEeCCchhHHHHHHHHHHhCCCCcEEEECchHHHH
Confidence            34678899999998765  344444  2233444332  33 55554433221111 00000011122333444578899


Q ss_pred             hhhccEEEecCChHHHHHHHHcCCCEEEE----eCCCCCCch-----HHHHHHHHHhCCCEEE-----eChhhHHHHHHc
Q 042754           83 LRSASLVISHAGSGSIFETLRHGKPLIVV----VNEDLMDNH-----QSELAEELAARKHLYC-----AHPQSLHQVIAG  148 (178)
Q Consensus        83 ~~~adlvIshaG~~Ti~E~l~~g~P~ivi----P~~~~~~~~-----Q~~nA~~l~~~G~~~~-----~~~~~L~~~i~~  148 (178)
                      |+.||++|+++|+.|+ |++++|+|+|++    |+++.+..|     |..|+..+.+.+++..     .+++.|.+.+.+
T Consensus       265 l~aADl~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~  343 (385)
T TIGR00215       265 MFAADAALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLL  343 (385)
T ss_pred             HHhCCEEeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHH
Confidence            9999999999999888 999999999999    887766667     8889999999998852     489999999998


Q ss_pred             cCccc
Q 042754          149 MDLES  153 (178)
Q Consensus       149 l~~~~  153 (178)
                      ++.+.
T Consensus       344 ll~~~  348 (385)
T TIGR00215       344 LLENG  348 (385)
T ss_pred             HhcCC
Confidence            87554

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.43  E-value=9.9e-13  Score=103.87  Aligned_cols=129  Identities=22%  Similarity=0.270  Sum_probs=93.1

Q ss_pred             CCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccc-cccCCcceEEEEeChhhHHHHhhhccE
Q 042754           10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKS-LGEDGLMAVDYFTFSSSIADHLRSASL   88 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~-~~~~~~~nv~v~~~~~~~~~~~~~adl   88 (178)
                      ++..|||++|+...+.+.-.+     +..|...++ .+-+++|..++..... ......+|+..+-+.+||.++|..||+
T Consensus       157 ~~r~ilI~lGGsDpk~lt~kv-----l~~L~~~~~-nl~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~  230 (318)
T COG3980         157 PKRDILITLGGSDPKNLTLKV-----LAELEQKNV-NLHIVVGSSNPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL  230 (318)
T ss_pred             chheEEEEccCCChhhhHHHH-----HHHhhccCe-eEEEEecCCCcchhHHHHHHhhCCCeeeEecchhHHHHHHhcch
Confidence            456799999866444443333     234444455 7888899665533221 111234688889999999999999999


Q ss_pred             EEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe----ChhhHHHHHHcc
Q 042754           89 VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA----HPQSLHQVIAGM  149 (178)
Q Consensus        89 vIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~----~~~~L~~~i~~l  149 (178)
                      +|+.|| .|++|++..|+|++++|..    .+|...|+.++.+|+....    +...+...+.++
T Consensus       231 aI~AaG-stlyEa~~lgvP~l~l~~a----~NQ~~~a~~f~~lg~~~~l~~~l~~~~~~~~~~~i  290 (318)
T COG3980         231 AISAAG-STLYEALLLGVPSLVLPLA----ENQIATAKEFEALGIIKQLGYHLKDLAKDYEILQI  290 (318)
T ss_pred             heeccc-hHHHHHHHhcCCceEEeee----ccHHHHHHHHHhcCchhhccCCCchHHHHHHHHHh
Confidence            999777 7999999999999999986    3699999999999987643    444444445444

>PLN03015 UDP-glucosyl transferase

Probab=99.42  E-value=2.9e-12  Score=109.55  Aligned_cols=131  Identities=15%  Similarity=0.106  Sum_probs=90.4

Q ss_pred             CCCCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc-------ccccccccCCcce---------
Q 042754            8 VSLKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY-------VPTKSLGEDGLMA---------   69 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~-------~~~~~~~~~~~~n---------   69 (178)
                      .+.+.+|+|++||...  ..-.+.+     ...|...+. .|+++......       +..... ...+.|         
T Consensus       264 ~~~~sVvyvsFGS~~~~~~~q~~el-----a~gl~~s~~-~FlWv~r~~~~~~~~~~~~~~~~~-~~lp~~f~er~~~rG  336 (470)
T PLN03015        264 QGERSVVYVCLGSGGTLTFEQTVEL-----AWGLELSGQ-RFVWVLRRPASYLGASSSDDDQVS-ASLPEGFLDRTRGVG  336 (470)
T ss_pred             CCCCCEEEEECCcCCcCCHHHHHHH-----HHHHHhCCC-cEEEEEecCccccccccccccchh-hcCChHHHHhhccCc
Confidence            3456899999999732  2222222     345666675 88888752100       000000 001222         


Q ss_pred             EEEEeChhhHHHHhhhcc--EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHH-HhCCCEEEe---------
Q 042754           70 VDYFTFSSSIADHLRSAS--LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEEL-AARKHLYCA---------  137 (178)
Q Consensus        70 v~v~~~~~~~~~~~~~ad--lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l-~~~G~~~~~---------  137 (178)
                      +.+.+|+|+ .+++++..  .+|||||.||++|++++|+|+|.+|..    .||..||+++ +..|+|+..         
T Consensus       337 l~v~~W~PQ-~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~----~DQ~~na~~~~~~~gvg~~~~~~~~~~~v  411 (470)
T PLN03015        337 LVVTQWAPQ-VEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLY----AEQWMNATLLTEEIGVAVRTSELPSEKVI  411 (470)
T ss_pred             eEEEecCCH-HHHhccCccCeEEecCCchhHHHHHHcCCCEEecccc----cchHHHHHHHHHHhCeeEEecccccCCcc
Confidence            567799998 48887755  599999999999999999999999986    5899999999 567888632         


Q ss_pred             ChhhHHHHHHccC
Q 042754          138 HPQSLHQVIAGMD  150 (178)
Q Consensus       138 ~~~~L~~~i~~l~  150 (178)
                      +.+++.++|+++.
T Consensus       412 ~~e~i~~~v~~lm  424 (470)
T PLN03015        412 GREEVASLVRKIV  424 (470)
T ss_pred             CHHHHHHHHHHHH
Confidence            5677888888875

>PLN02534 UDP-glycosyltransferase

Probab=99.41  E-value=2.8e-12  Score=110.38  Aligned_cols=130  Identities=12%  Similarity=0.117  Sum_probs=92.0

Q ss_pred             CCCcEEEEEeCCcc---HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc--------ccccccccCCcceEEEEeChh
Q 042754            9 SLKRIVFVTVGTTC---FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY--------VPTKSLGEDGLMAVDYFTFSS   77 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~---~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~--------~~~~~~~~~~~~nv~v~~~~~   77 (178)
                      +.+.+|+|++||..   .+.+.+.      ...|...+. .|++++.....        .+..........++.+.+|+|
T Consensus       281 ~~~sVvyvsfGS~~~~~~~q~~e~------a~gl~~~~~-~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~p  353 (491)
T PLN02534        281 KPRSVIYACLGSLCRLVPSQLIEL------GLGLEASKK-PFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAP  353 (491)
T ss_pred             CCCceEEEEecccccCCHHHHHHH------HHHHHhCCC-CEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCC
Confidence            44689999999973   2233332      235555664 88898874210        001100000235777889999


Q ss_pred             hHHHHhhhccE--EEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEE------------------
Q 042754           78 SIADHLRSASL--VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-RKHLYC------------------  136 (178)
Q Consensus        78 ~~~~~~~~adl--vIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-~G~~~~------------------  136 (178)
                      + .++++++++  +|||||.||++|++++|+|+|++|..    .+|..||+++++ .|+|+.                  
T Consensus       354 q-~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~----~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~  428 (491)
T PLN02534        354 Q-VLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLF----AEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVL  428 (491)
T ss_pred             H-HHHhcCCccceEEecCccHHHHHHHHcCCCEEecccc----ccHHHHHHHHHHhhcceEEecccccccccccccccCc
Confidence            8 689999888  99999999999999999999999986    489999999984 355441                  


Q ss_pred             eChhhHHHHHHccC
Q 042754          137 AHPQSLHQVIAGMD  150 (178)
Q Consensus       137 ~~~~~L~~~i~~l~  150 (178)
                      .+.+++.++|+++.
T Consensus       429 v~~eev~~~v~~~m  442 (491)
T PLN02534        429 VKKDEVEKAVKTLM  442 (491)
T ss_pred             cCHHHHHHHHHHHh
Confidence            35677888888875

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.40  E-value=6.5e-13  Score=110.30  Aligned_cols=157  Identities=13%  Similarity=0.154  Sum_probs=97.2

Q ss_pred             CCcEEEEEeCCccHH--HHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCc-ccccccccCC-cceEEEEeChhhHHHHh
Q 042754           10 LKRIVFVTVGTTCFD--ALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTY-VPTKSLGEDG-LMAVDYFTFSSSIADHL   83 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~--~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~-~~~~~~~~~~-~~nv~v~~~~~~~~~~~   83 (178)
                      ++++|++.+||.+.+  .+++.+  .+++..+.+  .+. +++++.|.... .......... ..++.++  .+++..+|
T Consensus       185 ~~~~il~~~gsr~~~~~~~~~~l--~~a~~~l~~~~~~~-~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~  259 (380)
T PRK00025        185 DARVLALLPGSRGQEIKRLLPPF--LKAAQLLQQRYPDL-RFVLPLVNPKRREQIEEALAEYAGLEVTLL--DGQKREAM  259 (380)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH--HHHHHHHHHhCCCe-EEEEecCChhhHHHHHHHHhhcCCCCeEEE--cccHHHHH
Confidence            467788888987654  444444  233444433  244 77777763321 1111111111 2234443  35799999


Q ss_pred             hhccEEEecCChHHHHHHHHcCCCEEEE----eCCCCCCchHHHH-----HHHHHhCCCEE-----EeChhhHHHHHHcc
Q 042754           84 RSASLVISHAGSGSIFETLRHGKPLIVV----VNEDLMDNHQSEL-----AEELAARKHLY-----CAHPQSLHQVIAGM  149 (178)
Q Consensus        84 ~~adlvIshaG~~Ti~E~l~~g~P~ivi----P~~~~~~~~Q~~n-----A~~l~~~G~~~-----~~~~~~L~~~i~~l  149 (178)
                      +.||++|+.+|.+|+ |++++|+|+|++    |+++...+||..|     ++.+.+.+.+.     ..+++.|.+.+.++
T Consensus       260 ~~aDl~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l  338 (380)
T PRK00025        260 AAADAALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPL  338 (380)
T ss_pred             HhCCEEEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHH
Confidence            999999999998877 999999999999    4444555666654     45555554332     23788899998887


Q ss_pred             Ccc---------cC----CCCCCCChh-HHHHHHHHhc
Q 042754          150 DLE---------SL----LPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       150 ~~~---------~~----~~~~~~~~~-~i~~~i~~~~  173 (178)
                      +.+         +.    +.. .+++. ++++.|.+.+
T Consensus       339 l~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~  375 (380)
T PRK00025        339 LADGARRQALLEGFTELHQQL-RCGADERAAQAVLELL  375 (380)
T ss_pred             hcCHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence            521         11    222 45666 9999888765

>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]

Probab=99.34  E-value=1.3e-11  Score=106.11  Aligned_cols=115  Identities=16%  Similarity=0.141  Sum_probs=82.1

Q ss_pred             CcEEEEEeCCccH-----HHHHHHhccHHHHHHHHhC-CCCeEEEEEeCCCccc--ccccccCCcceEEEEeChhhHHHH
Q 042754           11 KRIVFVTVGTTCF-----DALVKAVDTLEVKQELTRR-GYTHLLIQMGRGTYVP--TKSLGEDGLMAVDYFTFSSSIADH   82 (178)
Q Consensus        11 ~~~ilVt~Gs~~~-----~~l~~~~~~~~~~~~l~~~-~~~~vvv~~G~~~~~~--~~~~~~~~~~nv~v~~~~~~~~~~   82 (178)
                      ..+|+|++||...     ....+.+     ...+... ++ .+++..-......  .... ...+.||...+|.|+...+
T Consensus       277 ~~vvyvSfGS~~~~~~lp~~~~~~l-----~~~l~~~~~~-~FiW~~~~~~~~~~~~~~~-~~~~~nV~~~~W~PQ~~ll  349 (496)
T KOG1192|consen  277 HSVVYISFGSMVNSADLPEEQKKEL-----AKALESLQGV-TFLWKYRPDDSIYFPEGLP-NRGRGNVVLSKWAPQNDLL  349 (496)
T ss_pred             CCeEEEECCcccccccCCHHHHHHH-----HHHHHhCCCc-eEEEEecCCcchhhhhcCC-CCCcCceEEecCCCcHHHh
Confidence            4799999999841     1222233     4455555 54 6788777543211  1110 0013578888999996433


Q ss_pred             --hhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 042754           83 --LRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC  136 (178)
Q Consensus        83 --~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~  136 (178)
                        =++..++|||||.||++|++++|||+|.+|..    +||..||+++++.|.+..
T Consensus       350 l~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf----~DQ~~Na~~i~~~g~~~v  401 (496)
T KOG1192|consen  350 LDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLF----GDQPLNARLLVRHGGGGV  401 (496)
T ss_pred             cCCCcCcEEEECCcccHHHHHHhcCCceecCCcc----ccchhHHHHHHhCCCEEE
Confidence              35578999999999999999999999999986    589999999999998864

>PRK14089 ipid-A-disaccharide synthase; Provisional

Probab=99.05  E-value=5.1e-10  Score=92.58  Aligned_cols=108  Identities=14%  Similarity=0.145  Sum_probs=71.9

Q ss_pred             CcEEEEEeCCccHH--HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhccE
Q 042754           11 KRIVFVTVGTTCFD--ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASL   88 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~--~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~adl   88 (178)
                      .++|++..||.+.+  .+...+  .++...+.+. . ..+++++.............. ..+.   +++++.++|.+||+
T Consensus       167 ~~~I~llPGSR~~Ei~~llP~~--~~aa~~L~~~-~-~~~~i~~a~~~~~i~~~~~~~-~~~~---~~~~~~~~m~~aDl  238 (347)
T PRK14089        167 EGTIAFMPGSRKSEIKRLMPIF--KELAKKLEGK-E-KILVVPSFFKGKDLKEIYGDI-SEFE---ISYDTHKALLEAEF  238 (347)
T ss_pred             CCEEEEECCCCHHHHHHHHHHH--HHHHHHHhhc-C-cEEEEeCCCcHHHHHHHHhcC-CCcE---EeccHHHHHHhhhH
Confidence            48999999998754  333333  2334455442 3 466667765431111111111 1233   33467899999999


Q ss_pred             EEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh
Q 042754           89 VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA  130 (178)
Q Consensus        89 vIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~  130 (178)
                      +|+.+|..|+ |++.+|+|+|+ ++.  .+.+|+.||+++.+
T Consensus       239 al~~SGT~TL-E~al~g~P~Vv-~Yk--~~~lty~iak~lv~  276 (347)
T PRK14089        239 AFICSGTATL-EAALIGTPFVL-AYK--AKAIDYFIAKMFVK  276 (347)
T ss_pred             HHhcCcHHHH-HHHHhCCCEEE-EEe--CCHHHHHHHHHHHc
Confidence            9999998888 99999999997 554  46799999999994

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=98.99  E-value=5.6e-09  Score=85.97  Aligned_cols=93  Identities=18%  Similarity=0.247  Sum_probs=70.2

Q ss_pred             ceEEEEeC--hhhHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChhhHH
Q 042754           68 MAVDYFTF--SSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA--HPQSLH  143 (178)
Q Consensus        68 ~nv~v~~~--~~~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~--~~~~L~  143 (178)
                      .++++.++  ..+|..+|..||++|+.+| +.+.|++++|+|+|++...      |.  +..+.+.|.++..  +++.+.
T Consensus       258 ~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg-gi~~Ea~~~g~PvI~~~~~------~~--~~~~~~~g~~~~~~~~~~~i~  328 (363)
T cd03786         258 PNVLLISPLGYLYFLLLLKNADLVLTDSG-GIQEEASFLGVPVLNLRDR------TE--RPETVESGTNVLVGTDPEAIL  328 (363)
T ss_pred             CCEEEECCcCHHHHHHHHHcCcEEEEcCc-cHHhhhhhcCCCEEeeCCC------Cc--cchhhheeeEEecCCCHHHHH
Confidence            57777643  4579999999999999999 7788999999999997632      33  4456778877654  478999


Q ss_pred             HHHHccCcc-----c--CCCCCCCChh-HHHHHH
Q 042754          144 QVIAGMDLE-----S--LLPYQPGDAT-PVAKLI  169 (178)
Q Consensus       144 ~~i~~l~~~-----~--~~~~~~~~~~-~i~~~i  169 (178)
                      +++.+++..     .  ..+|..++++ +|++.|
T Consensus       329 ~~i~~ll~~~~~~~~~~~~~~~~~~a~~~I~~~l  362 (363)
T cd03786         329 AAIEKLLSDEFAYSLMSINPYGDGNASERIVEIL  362 (363)
T ss_pred             HHHHHHhcCchhhhcCCCCCCCCCHHHHHHHHHh
Confidence            999887521     1  3567777888 888876

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=98.61  E-value=1.5e-06  Score=72.06  Aligned_cols=146  Identities=13%  Similarity=0.196  Sum_probs=89.5

Q ss_pred             CCcEEEEEeCCc-----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccc-ccccCCcceEEEEeChh--hH
Q 042754           10 LKRIVFVTVGTT-----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTK-SLGEDGLMAVDYFTFSS--SI   79 (178)
Q Consensus        10 ~~~~ilVt~Gs~-----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~-~~~~~~~~nv~v~~~~~--~~   79 (178)
                      +++.++++++-.     +...+.+++      ..+.+  .+. ++++..+++...... ........++++.+..+  ++
T Consensus       196 ~~~~vl~~~hr~~~~~k~~~~ll~a~------~~l~~~~~~~-~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  268 (365)
T TIGR00236       196 DKRYILLTLHRRENVGEPLENIFKAI------REIVEEFEDV-QIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDF  268 (365)
T ss_pred             CCCEEEEecCchhhhhhHHHHHHHHH------HHHHHHCCCC-EEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHH
Confidence            346777777532     233444443      33322  244 666665654321111 01111235788876543  46


Q ss_pred             HHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChhhHHHHHHccCc------
Q 042754           80 ADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA--HPQSLHQVIAGMDL------  151 (178)
Q Consensus        80 ~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~--~~~~L~~~i~~l~~------  151 (178)
                      ..+|+.||++|+.+|. .+.|++++|+|+|.++...   +.|.     +.+.|.++..  +++++.+++.+++.      
T Consensus       269 ~~~l~~ad~vv~~Sg~-~~~EA~a~g~PvI~~~~~~---~~~e-----~~~~g~~~lv~~d~~~i~~ai~~ll~~~~~~~  339 (365)
T TIGR00236       269 LNLAANSHLILTDSGG-VQEEAPSLGKPVLVLRDTT---ERPE-----TVEAGTNKLVGTDKENITKAAKRLLTDPDEYK  339 (365)
T ss_pred             HHHHHhCCEEEECChh-HHHHHHHcCCCEEECCCCC---CChH-----HHhcCceEEeCCCHHHHHHHHHHHHhChHHHH
Confidence            7889999999998885 4799999999999976532   2232     2335555433  78899999887741      


Q ss_pred             ---ccCCCCCCCChh-HHHHHHHH
Q 042754          152 ---ESLLPYQPGDAT-PVAKLINR  171 (178)
Q Consensus       152 ---~~~~~~~~~~~~-~i~~~i~~  171 (178)
                         ....+|.+++++ +|++.|.+
T Consensus       340 ~~~~~~~~~g~~~a~~ri~~~l~~  363 (365)
T TIGR00236       340 KMSNASNPYGDGEASERIVEELLN  363 (365)
T ss_pred             HhhhcCCCCcCchHHHHHHHHHHh
Confidence               234567777787 99998875

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.52  E-value=1.1e-06  Score=71.00  Aligned_cols=120  Identities=18%  Similarity=0.244  Sum_probs=77.9

Q ss_pred             cEEEEEeCCc----cHHHHHHHhccHHHHHHHHh-CCCCeEEEEEeCCCcccccccccCCcceEEEEeChh--hHHHHhh
Q 042754           12 RIVFVTVGTT----CFDALVKAVDTLEVKQELTR-RGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSS--SIADHLR   84 (178)
Q Consensus        12 ~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~-~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~--~~~~~~~   84 (178)
                      +.++++.|+.    +.+.+.+.+      ..+.. .++  -++++|.........   ....|+.+.++++  ++..+|+
T Consensus       197 ~~~i~~~G~~~~~k~~~~~i~~~------~~l~~~~~~--~l~i~G~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~  265 (364)
T cd03814         197 RPVLLYVGRLAPEKNLEALLDAD------LPLRRRPPV--RLVIVGDGPARARLE---ARYPNVHFLGFLDGEELAAAYA  265 (364)
T ss_pred             CeEEEEEeccccccCHHHHHHHH------HHhhhcCCc--eEEEEeCCchHHHHh---ccCCcEEEEeccCHHHHHHHHH
Confidence            5677888865    334444444      33333 233  445566544322111   1346899999754  6899999


Q ss_pred             hccEEEecCC----hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHHccC
Q 042754           85 SASLVISHAG----SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIAGMD  150 (178)
Q Consensus        85 ~adlvIshaG----~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~~l~  150 (178)
                      .||++|+.+.    .++++|++++|+|+|.-+...        +.+.+++.+.++..   +.+++.++|.++.
T Consensus       266 ~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~--------~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~  330 (364)
T cd03814         266 SADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGG--------PADIVTDGENGLLVEPGDAEAFAAALAALL  330 (364)
T ss_pred             hCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCC--------chhhhcCCcceEEcCCCCHHHHHHHHHHHH
Confidence            9999997764    478999999999999866541        34455665666543   5666888888874

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.49  E-value=3.1e-06  Score=67.66  Aligned_cols=125  Identities=17%  Similarity=0.227  Sum_probs=80.1

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCcccccc----cccCCcceEEEEeChhhH
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTKS----LGEDGLMAVDYFTFSSSI   79 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~~----~~~~~~~nv~v~~~~~~~   79 (178)
                      +.+.++++.|+.    +...+.+.+      ..+..  .++ ++ +++|.........    .......++.+.++.+++
T Consensus       186 ~~~~~i~~~G~~~~~k~~~~li~~~------~~l~~~~~~~-~l-~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~  257 (359)
T cd03808         186 EDDPVFLFVARLLKDKGIDELLEAA------RILKAKGPNV-RL-LLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDV  257 (359)
T ss_pred             CCCcEEEEEeccccccCHHHHHHHH------HHHHhcCCCe-EE-EEEcCCCcchhhHHHHHHhcCCcceEEEeeccccH
Confidence            356678888864    444555554      33332  233 44 4556544321111    011234689999998889


Q ss_pred             HHHhhhccEEEecCC----hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHHccC
Q 042754           80 ADHLRSASLVISHAG----SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIAGMD  150 (178)
Q Consensus        80 ~~~~~~adlvIshaG----~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~~l~  150 (178)
                      .++|+.||++|.-+.    .+++.|++++|+|+|+-+...        ..+.+.+.+.|+..   +++++.+++.++.
T Consensus       258 ~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~--------~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~  327 (359)
T cd03808         258 PELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPG--------CREAVIDGVNGFLVPPGDAEALADAIERLI  327 (359)
T ss_pred             HHHHHhccEEEecCcccCcchHHHHHHHcCCCEEEecCCC--------chhhhhcCcceEEECCCCHHHHHHHHHHHH
Confidence            999999999997653    689999999999999855431        23445545555543   5788999988864

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.42  E-value=5.2e-06  Score=66.78  Aligned_cols=126  Identities=20%  Similarity=0.223  Sum_probs=79.7

Q ss_pred             CCCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeCh--hhHHHH
Q 042754            9 SLKRIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS--SSIADH   82 (178)
Q Consensus         9 ~~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~--~~~~~~   82 (178)
                      ++.+.+++..|+.    +...+.+.+      ..+...++ ++ +++|................++.+.+|+  +++.++
T Consensus       188 ~~~~~~i~~~G~~~~~k~~~~li~~~------~~l~~~~~-~l-~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~  259 (359)
T cd03823         188 PGGRLRFGFIGQLTPHKGVDLLLEAF------KRLPRGDI-EL-VIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDF  259 (359)
T ss_pred             CCCceEEEEEecCccccCHHHHHHHH------HHHHhcCc-EE-EEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHH
Confidence            3456777788865    334444443      33333343 44 5567654322211000124689999998  679999


Q ss_pred             hhhccEEEe-----cCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHHccC
Q 042754           83 LRSASLVIS-----HAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIAGMD  150 (178)
Q Consensus        83 ~~~adlvIs-----haG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~~l~  150 (178)
                      |+.||++|.     -+...++.|++++|+|+|+-+..        ...+.+.+.+.|+..   +.+++.+++.++.
T Consensus       260 ~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~--------~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~  327 (359)
T cd03823         260 YAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIG--------GMAELVRDGVNGLLFPPGDAEDLAAALERLI  327 (359)
T ss_pred             HHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCC--------CHHHHhcCCCcEEEECCCCHHHHHHHHHHHH
Confidence            999999994     33456899999999999975432        244556665456543   5688999988875

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.35  E-value=1.7e-05  Score=58.32  Aligned_cols=129  Identities=16%  Similarity=0.235  Sum_probs=80.0

Q ss_pred             CCCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccc-c--ccccCCcceEEEEeChh--hH
Q 042754            9 SLKRIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPT-K--SLGEDGLMAVDYFTFSS--SI   79 (178)
Q Consensus         9 ~~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~-~--~~~~~~~~nv~v~~~~~--~~   79 (178)
                      ++++.++++.|..    +...+++++.  ..... ...+  -.++++|....... .  ........++.++++.+  ++
T Consensus        12 ~~~~~~il~~g~~~~~K~~~~li~a~~--~l~~~-~~~~--~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l   86 (172)
T PF00534_consen   12 PDKKKIILFIGRLDPEKGIDLLIEAFK--KLKEK-KNPN--YKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDDEL   86 (172)
T ss_dssp             -TTSEEEEEESESSGGGTHHHHHHHHH--HHHHH-HHTT--EEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHHHH
T ss_pred             CCCCeEEEEEecCccccCHHHHHHHHH--HHHhh-cCCC--eEEEEEccccccccccccccccccccccccccccccccc
Confidence            3456677777764    4556666652  11111 1233  46667773322111 1  01112346899999987  79


Q ss_pred             HHHhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHHccC
Q 042754           80 ADHLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIAGMD  150 (178)
Q Consensus        80 ~~~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~~l~  150 (178)
                      ..++..||++|+.    +.+.++.|++++|+|.|+ +..       ..+.+.+.+...|+..   +++++.++|.++.
T Consensus        87 ~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~-~~~-------~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~l  156 (172)
T PF00534_consen   87 DELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIA-SDI-------GGNNEIINDGVNGFLFDPNDIEELADAIEKLL  156 (172)
T ss_dssp             HHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEE-ESS-------THHHHHSGTTTSEEEESTTSHHHHHHHHHHHH
T ss_pred             ccccccceeccccccccccccccccccccccceee-ccc-------cCCceeeccccceEEeCCCCHHHHHHHHHHHH
Confidence            9999999999987    677899999999999996 432       1345666666656654   5678888888875

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=98.33  E-value=9e-06  Score=64.84  Aligned_cols=125  Identities=16%  Similarity=0.203  Sum_probs=77.8

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhC--CCCeEEEEEeCCCccccccc---ccCCcceEEEEeCh--hh
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTRR--GYTHLLIQMGRGTYVPTKSL---GEDGLMAVDYFTFS--SS   78 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~--~~~~vvv~~G~~~~~~~~~~---~~~~~~nv~v~~~~--~~   78 (178)
                      ..+..++..|+.    +...+.+.+      ..+...  ++ ++ +++|..........   ......++.+.+++  ++
T Consensus       197 ~~~~~i~~~g~~~~~k~~~~~i~~~------~~~~~~~~~~-~l-~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~  268 (374)
T cd03801         197 EDEPVILFVGRLVPRKGVDLLLEAL------AKLRKEYPDV-RL-VIVGDGPLREELEALAAELGLGDRVTFLGFVPDED  268 (374)
T ss_pred             CCCeEEEEecchhhhcCHHHHHHHH------HHHhhhcCCe-EE-EEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhh
Confidence            345667777765    334444444      233332  33 44 45564432111100   01234689999998  67


Q ss_pred             HHHHhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHHccC
Q 042754           79 IADHLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIAGMD  150 (178)
Q Consensus        79 ~~~~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~~l~  150 (178)
                      +..+|..||++|.-    +..+++.|++++|+|+|+.+.+        ...+.+.+.+.++..   +++++.++|.++.
T Consensus       269 ~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~--------~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~  339 (374)
T cd03801         269 LPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVG--------GIPEVVEDGETGLLVPPGDPEALAEAILRLL  339 (374)
T ss_pred             HHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCC--------ChhHHhcCCcceEEeCCCCHHHHHHHHHHHH
Confidence            99999999999953    4568999999999999975543        234455545555433   4688999988874

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=98.27  E-value=6.6e-06  Score=66.81  Aligned_cols=124  Identities=19%  Similarity=0.230  Sum_probs=78.6

Q ss_pred             CcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCcccc-c--ccccCCcceEEEEeChhhHHH
Q 042754           11 KRIVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPT-K--SLGEDGLMAVDYFTFSSSIAD   81 (178)
Q Consensus        11 ~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~-~--~~~~~~~~nv~v~~~~~~~~~   81 (178)
                      .+.++++.|+.    |...+.+++      ..+..  .++ ++++ +|....... .  ........++.+.++.+++..
T Consensus       187 ~~~~~l~~g~~~~~kg~~~li~a~------~~l~~~~~~~-~l~i-~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~  258 (360)
T cd04951         187 DTFVILAVGRLVEAKDYPNLLKAF------AKLLSDYLDI-KLLI-AGDGPLRATLERLIKALGLSNRVKLLGLRDDIAA  258 (360)
T ss_pred             CCEEEEEEeeCchhcCcHHHHHHH------HHHHhhCCCe-EEEE-EcCCCcHHHHHHHHHhcCCCCcEEEecccccHHH
Confidence            45667777754    344455444      23322  233 5554 555432111 1  001123457999999989999


Q ss_pred             HhhhccEEEecCC----hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChhhHHHHHHccC
Q 042754           82 HLRSASLVISHAG----SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-AHPQSLHQVIAGMD  150 (178)
Q Consensus        82 ~~~~adlvIshaG----~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~~~~~L~~~i~~l~  150 (178)
                      +|+.||++|.-+.    .+++.|++++|+|+|+-...        .+.+.+.+.|..+. .+++++.+++.++.
T Consensus       259 ~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~--------~~~e~i~~~g~~~~~~~~~~~~~~i~~ll  324 (360)
T cd04951         259 YYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAG--------GVREVVGDSGLIVPISDPEALANKIDEIL  324 (360)
T ss_pred             HHHhhceEEecccccCCChHHHHHHHcCCCEEEecCC--------ChhhEecCCceEeCCCCHHHHHHHHHHHH
Confidence            9999999998764    68999999999999974332        23444555565543 47888999998874

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.27  E-value=1e-05  Score=64.91  Aligned_cols=124  Identities=16%  Similarity=0.172  Sum_probs=77.4

Q ss_pred             CcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccc---cc-ccCCcceEEEEeChhhHH
Q 042754           11 KRIVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTK---SL-GEDGLMAVDYFTFSSSIA   80 (178)
Q Consensus        11 ~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~---~~-~~~~~~nv~v~~~~~~~~   80 (178)
                      .+.++++.|+.    |.+.+.+++      ..+..  .++ ++ +++|........   .. ......++.+.++.+++.
T Consensus       192 ~~~~i~~~G~~~~~K~~~~li~a~------~~l~~~~~~~-~l-~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~  263 (365)
T cd03807         192 DTFLIGIVARLHPQKDHATLLRAA------ALLLKKFPNA-RL-LLVGDGPDRANLELLALKELGLEDKVILLGERSDVP  263 (365)
T ss_pred             CCeEEEEecccchhcCHHHHHHHH------HHHHHhCCCe-EE-EEecCCcchhHHHHHHHHhcCCCceEEEccccccHH
Confidence            45677788865    344455544      23332  233 44 445654321111   01 112345788888888899


Q ss_pred             HHhhhccEEEecCC----hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChhhHHHHHHccC
Q 042754           81 DHLRSASLVISHAG----SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-AHPQSLHQVIAGMD  150 (178)
Q Consensus        81 ~~~~~adlvIshaG----~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~~~~~L~~~i~~l~  150 (178)
                      .+|+.||++|..+.    .+++.|++++|+|+|+-...    +    +.+.+.+.|..+. .+++++.+++.++.
T Consensus       264 ~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~----~----~~e~~~~~g~~~~~~~~~~l~~~i~~l~  330 (365)
T cd03807         264 ALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVG----D----NAELVGDTGFLVPPGDPEALAEAIEALL  330 (365)
T ss_pred             HHHHhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCC----C----hHHHhhcCCEEeCCCCHHHHHHHHHHHH
Confidence            99999999997654    47999999999999974432    2    3344444454443 37888999988875

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.25  E-value=1.9e-05  Score=63.30  Aligned_cols=127  Identities=15%  Similarity=0.187  Sum_probs=78.6

Q ss_pred             CcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc-c--cccCCcceEEEEeChh--hHHH
Q 042754           11 KRIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK-S--LGEDGLMAVDYFTFSS--SIAD   81 (178)
Q Consensus        11 ~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~-~--~~~~~~~nv~v~~~~~--~~~~   81 (178)
                      .+..++..|+.    +...+.+++      ..+......-.++++|........ .  .......++.+.++++  ++.+
T Consensus       201 ~~~~i~~~g~~~~~k~~~~li~~~------~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~  274 (377)
T cd03798         201 DKKVILFVGRLVPRKGIDYLIEAL------ARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPA  274 (377)
T ss_pred             CceEEEEeccCccccCHHHHHHHH------HHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHH
Confidence            56677777865    344455444      333332111344556765432111 0  0012346899999985  4889


Q ss_pred             HhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHHccCc
Q 042754           82 HLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIAGMDL  151 (178)
Q Consensus        82 ~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~~l~~  151 (178)
                      ++..||++|.-    +..+++.|++++|+|.|+-+..        ...+.+.+.+.|+..   +++++.++|.++..
T Consensus       275 ~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~--------~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~  343 (377)
T cd03798         275 YYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVG--------GIPEIITDGENGLLVPPGDPEALAEAILRLLA  343 (377)
T ss_pred             HHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCC--------ChHHHhcCCcceeEECCCCHHHHHHHHHHHhc
Confidence            99999999943    4568999999999999974432        134455565555533   77888888888753

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=98.25  E-value=5.7e-06  Score=67.72  Aligned_cols=126  Identities=14%  Similarity=0.165  Sum_probs=78.4

Q ss_pred             CcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccc-cc--cccCCcceEEEEeChh--hHHH
Q 042754           11 KRIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPT-KS--LGEDGLMAVDYFTFSS--SIAD   81 (178)
Q Consensus        11 ~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~-~~--~~~~~~~nv~v~~~~~--~~~~   81 (178)
                      .+..+++.|+.    +...+++++      ..+.+....-.++++|....... ..  .......++++.++++  ++..
T Consensus       187 ~~~~i~~~G~~~~~K~~~~li~a~------~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~  260 (367)
T cd05844         187 RPPRILFVGRFVEKKGPLLLLEAF------ARLARRVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRE  260 (367)
T ss_pred             CCcEEEEEEeeccccChHHHHHHH------HHHHHhCCCeEEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHH
Confidence            45567777865    334455444      33332211134455676532211 10  0011346788889874  5999


Q ss_pred             HhhhccEEEecC----------ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHHc
Q 042754           82 HLRSASLVISHA----------GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIAG  148 (178)
Q Consensus        82 ~~~~adlvIsha----------G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~~  148 (178)
                      +|+.||++|.-+          -++++.|++++|+|+|.-+..        .+++.+.+.+.|+..   +++++.++|.+
T Consensus       261 ~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~--------~~~e~i~~~~~g~~~~~~d~~~l~~~i~~  332 (367)
T cd05844         261 LMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG--------GIPEAVEDGETGLLVPEGDVAALAAALGR  332 (367)
T ss_pred             HHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC--------CchhheecCCeeEEECCCCHHHHHHHHHH
Confidence            999999988532          358999999999999975543        144555555556543   77889999988


Q ss_pred             cC
Q 042754          149 MD  150 (178)
Q Consensus       149 l~  150 (178)
                      +.
T Consensus       333 l~  334 (367)
T cd05844         333 LL  334 (367)
T ss_pred             HH
Confidence            75

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.24  E-value=1.8e-05  Score=62.87  Aligned_cols=125  Identities=18%  Similarity=0.215  Sum_probs=76.7

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccc---ccccCCcceEEEEeChhhHH
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTK---SLGEDGLMAVDYFTFSSSIA   80 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~---~~~~~~~~nv~v~~~~~~~~   80 (178)
                      ..+..+++.|+.    +...+.+++      ..+.+  .++ ++ +++|........   ........++.+.++.+++.
T Consensus       176 ~~~~~i~~~g~~~~~K~~~~l~~~~------~~l~~~~~~~-~l-~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~  247 (348)
T cd03820         176 LKSKRILAVGRLVPQKGFDLLIEAW------AKIAKKHPDW-KL-RIVGDGPEREALEALIKELGLEDRVILLGFTKNIE  247 (348)
T ss_pred             CCCcEEEEEEeeccccCHHHHHHHH------HHHHhcCCCe-EE-EEEeCCCCHHHHHHHHHHcCCCCeEEEcCCcchHH
Confidence            345566777754    444555554      33332  233 44 455654322111   01112345788888878899


Q ss_pred             HHhhhccEEEecCC----hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCC-CEEEe---ChhhHHHHHHccC
Q 042754           81 DHLRSASLVISHAG----SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARK-HLYCA---HPQSLHQVIAGMD  150 (178)
Q Consensus        81 ~~~~~adlvIshaG----~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G-~~~~~---~~~~L~~~i~~l~  150 (178)
                      .+|..||++|.-+.    .+++.|++++|+|+|+-+...    .+.    .+.+.+ .|+..   +++++.++|.++.
T Consensus       248 ~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~----~~~~~~~~g~~~~~~~~~~~~~~i~~ll  317 (348)
T cd03820         248 EYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPT----GPS----EIIEDGVNGLLVPNGDVEALAEALLRLM  317 (348)
T ss_pred             HHHHhCCEEEeCccccccCHHHHHHHHcCCCEEEecCCC----chH----hhhccCcceEEeCCCCHHHHHHHHHHHH
Confidence            99999999998762    579999999999999755431    122    233333 55433   5688999998884

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.23  E-value=2.8e-05  Score=63.26  Aligned_cols=124  Identities=15%  Similarity=0.153  Sum_probs=78.8

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccc---ccccCCcceEEEEeChhhHH
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTK---SLGEDGLMAVDYFTFSSSIA   80 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~---~~~~~~~~nv~v~~~~~~~~   80 (178)
                      +.+.++++.|+.    |.+.+.+++      ..+..  .++ + ++++|........   ........++...++.+++.
T Consensus       190 ~~~~~i~~vGr~~~~Kg~~~li~a~------~~l~~~~~~~-~-l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~  261 (358)
T cd03812         190 EDKFVIGHVGRFSEQKNHEFLIEIF------AELLKKNPNA-K-LLLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVP  261 (358)
T ss_pred             CCCEEEEEEeccccccChHHHHHHH------HHHHHhCCCe-E-EEEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHH
Confidence            456778888865    455555555      33333  233 4 4456765432111   00112346789999888899


Q ss_pred             HHhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-e--ChhhHHHHHHccC
Q 042754           81 DHLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-A--HPQSLHQVIAGMD  150 (178)
Q Consensus        81 ~~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~--~~~~L~~~i~~l~  150 (178)
                      ++++.||++|.-    +-..+++|++++|+|+|.-...    +    ....+.+ +.++. .  +++++.++|.++.
T Consensus       262 ~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~----~----~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~  329 (358)
T cd03812         262 ELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTI----T----KEVDLTD-LVKFLSLDESPEIWAEEILKLK  329 (358)
T ss_pred             HHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCC----c----hhhhhcc-CccEEeCCCCHHHHHHHHHHHH
Confidence            999999999975    3468999999999999974433    1    2233444 33432 2  4699999999885

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.22  E-value=2.7e-05  Score=63.26  Aligned_cols=126  Identities=14%  Similarity=0.132  Sum_probs=77.4

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc-------ccccCCcceEEEEeChhh
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK-------SLGEDGLMAVDYFTFSSS   78 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~-------~~~~~~~~nv~v~~~~~~   78 (178)
                      +.+.+++..|..    |...+.+++      ..+...+..--++++|........       ........++++.+|.++
T Consensus       183 ~~~~~i~~~Gr~~~~Kg~~~li~~~------~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~  256 (355)
T cd03819         183 KGKPVILLPGRLTRWKGQEVFIEAL------ARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSD  256 (355)
T ss_pred             CCceEEEEeeccccccCHHHHHHHH------HHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCCccc
Confidence            345567777763    455565555      333332111345566765321110       000123467999999888


Q ss_pred             HHHHhhhccEEEecC-----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE---eChhhHHHHHHcc
Q 042754           79 IADHLRSASLVISHA-----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC---AHPQSLHQVIAGM  149 (178)
Q Consensus        79 ~~~~~~~adlvIsha-----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~---~~~~~L~~~i~~l  149 (178)
                      +..+|+.||++|+-+     .+++++|++++|+|+|+-...    +    ..+.+.+.+.|+.   .+++.+.++|..+
T Consensus       257 ~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~----~~e~i~~~~~g~~~~~~~~~~l~~~i~~~  327 (355)
T cd03819         257 MPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----G----ARETVRPGETGLLVPPGDAEALAQALDQI  327 (355)
T ss_pred             HHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----C----cHHHHhCCCceEEeCCCCHHHHHHHHHHH
Confidence            999999999999755     247999999999999964322    2    2334444434543   3788888888644

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=98.19  E-value=3.1e-05  Score=65.54  Aligned_cols=78  Identities=14%  Similarity=0.075  Sum_probs=61.4

Q ss_pred             eEEEEeChhhHHHHhhhccEEEe-----cCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChhhH
Q 042754           69 AVDYFTFSSSIADHLRSASLVIS-----HAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-AHPQSL  142 (178)
Q Consensus        69 nv~v~~~~~~~~~~~~~adlvIs-----haG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~~~~~L  142 (178)
                      ++.+.++..+|..+|+.||+++.     -+|+.++.|++++|+|+|.-|...    ++.+..+.+.+.|+++. .++++|
T Consensus       303 ~v~l~~~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~----~~~e~~~~~~~~g~~~~~~d~~~L  378 (425)
T PRK05749        303 DVLLGDTMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTF----NFKEIFERLLQAGAAIQVEDAEDL  378 (425)
T ss_pred             cEEEEecHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCcc----CHHHHHHHHHHCCCeEEECCHHHH
Confidence            46666777789999999999543     246668999999999999877642    36677787778888875 488999


Q ss_pred             HHHHHccC
Q 042754          143 HQVIAGMD  150 (178)
Q Consensus       143 ~~~i~~l~  150 (178)
                      .++|.++.
T Consensus       379 a~~l~~ll  386 (425)
T PRK05749        379 AKAVTYLL  386 (425)
T ss_pred             HHHHHHHh
Confidence            99998875

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.17  E-value=2.2e-05  Score=63.41  Aligned_cols=126  Identities=18%  Similarity=0.271  Sum_probs=77.2

Q ss_pred             CCCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhC-CCCeEEEEEeCCCccccccc--ccCCcceEEEEeChh--hH
Q 042754            9 SLKRIVFVTVGTT----CFDALVKAVDTLEVKQELTRR-GYTHLLIQMGRGTYVPTKSL--GEDGLMAVDYFTFSS--SI   79 (178)
Q Consensus         9 ~~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~-~~~~vvv~~G~~~~~~~~~~--~~~~~~nv~v~~~~~--~~   79 (178)
                      ...+.++++.|+.    +...+.+++      ..+... ++ ++ +++|..........  ......++.+.++++  ++
T Consensus       217 ~~~~~~i~~~G~~~~~k~~~~l~~~~------~~l~~~~~~-~l-~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~  288 (394)
T cd03794         217 LDDKFVVLYAGNIGRAQGLDTLLEAA------ALLKDRPDI-RF-LIVGDGPEKEELKELAKALGLDNVTFLGRVPKEEL  288 (394)
T ss_pred             CCCcEEEEEecCcccccCHHHHHHHH------HHHhhcCCe-EE-EEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHH
Confidence            3456788888875    344455554      333332 44 54 45665432111100  011236899999874  68


Q ss_pred             HHHhhhccEEEecCC---------hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE---eChhhHHHHHH
Q 042754           80 ADHLRSASLVISHAG---------SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC---AHPQSLHQVIA  147 (178)
Q Consensus        80 ~~~~~~adlvIshaG---------~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~---~~~~~L~~~i~  147 (178)
                      .++|..||++|....         .+++.|++++|+|+|+.+...    .+.    .+.+.+.++.   .+++++.++|.
T Consensus       289 ~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~----~~~----~~~~~~~g~~~~~~~~~~l~~~i~  360 (394)
T cd03794         289 PELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGE----SAE----LVEEAGAGLVVPPGDPEALAAAIL  360 (394)
T ss_pred             HHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCC----chh----hhccCCcceEeCCCCHHHHHHHHH
Confidence            899999999995433         445899999999999877652    122    2233244433   27888999998


Q ss_pred             ccC
Q 042754          148 GMD  150 (178)
Q Consensus       148 ~l~  150 (178)
                      ++.
T Consensus       361 ~~~  363 (394)
T cd03794         361 ELL  363 (394)
T ss_pred             HHH
Confidence            885

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.15  E-value=3.6e-05  Score=61.93  Aligned_cols=124  Identities=15%  Similarity=0.139  Sum_probs=76.7

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccc---c--cccCCcceEEEEeChh-
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTK---S--LGEDGLMAVDYFTFSS-   77 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~---~--~~~~~~~nv~v~~~~~-   77 (178)
                      ..+.++++.|+.    +...+.+++      ..+..  .++ + ++++|........   .  .......++.+.+|++ 
T Consensus       201 ~~~~~i~~~G~~~~~K~~~~li~a~------~~l~~~~~~~-~-l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~  272 (375)
T cd03821         201 PDKRIILFLGRLHPKKGLDLLIEAF------AKLAERFPDW-H-LVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYG  272 (375)
T ss_pred             CCCcEEEEEeCcchhcCHHHHHHHH------HHhhhhcCCe-E-EEEECCCCcchHHHHHHHHHhcCccceEEEcCCCCh
Confidence            345567777765    344444444      33333  233 4 4566754321110   0  1112346899999987 


Q ss_pred             -hHHHHhhhccEEEecCC----hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChhhHHHHHHccC
Q 042754           78 -SIADHLRSASLVISHAG----SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC--AHPQSLHQVIAGMD  150 (178)
Q Consensus        78 -~~~~~~~~adlvIshaG----~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~--~~~~~L~~~i~~l~  150 (178)
                       ++..+|..||++|.-.-    ..++.|++++|+|+|+-+..    +    ..+.+.+ +.++.  .+.+++.++|.++.
T Consensus       273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~----~~~~~~~-~~~~~~~~~~~~~~~~i~~l~  343 (375)
T cd03821         273 EDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKV----P----WQELIEY-GCGWVVDDDVDALAAALRRAL  343 (375)
T ss_pred             HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCC----C----HHHHhhc-CceEEeCCChHHHHHHHHHHH
Confidence             68999999999987653    57999999999999975433    2    2233333 55543  35588988888875

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.12  E-value=2.6e-05  Score=62.88  Aligned_cols=125  Identities=18%  Similarity=0.219  Sum_probs=76.5

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccccc---ccCCcceEEEEeChh--h
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTKSL---GEDGLMAVDYFTFSS--S   78 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~~~---~~~~~~nv~v~~~~~--~   78 (178)
                      +.+.+++..|+.    +.+.+.+.+      ..+..  .++ ++ +++|..........   ......++...++++  +
T Consensus       200 ~~~~~i~~~G~~~~~k~~~~l~~~~------~~~~~~~~~~-~l-~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~  271 (374)
T cd03817         200 EDEPVLLYVGRLAKEKNIDFLIRAF------ARLLKEEPDV-KL-VIVGDGPEREELEELARELGLADRVIFTGFVPREE  271 (374)
T ss_pred             CCCeEEEEEeeeecccCHHHHHHHH------HHHHHhCCCe-EE-EEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHH
Confidence            345677777864    344555554      23332  334 44 44565432111100   012346899999984  5


Q ss_pred             HHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChhhHHHHHHccC
Q 042754           79 IADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA--HPQSLHQVIAGMD  150 (178)
Q Consensus        79 ~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~--~~~~L~~~i~~l~  150 (178)
                      +..+|+.||++|.-+    ...++.|++++|+|+|+....        ..++.+.+.+.++..  +..++.+++.++.
T Consensus       272 ~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~--------~~~~~i~~~~~g~~~~~~~~~~~~~i~~l~  341 (374)
T cd03817         272 LPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAP--------GLPDLVADGENGFLFPPGDEALAEALLRLL  341 (374)
T ss_pred             HHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCCC--------ChhhheecCceeEEeCCCCHHHHHHHHHHH
Confidence            889999999999543    357999999999999975543        234555665556543  2227888888775

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.12  E-value=3.4e-05  Score=63.20  Aligned_cols=124  Identities=10%  Similarity=0.144  Sum_probs=77.1

Q ss_pred             CcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh-CCCCeEEEEEeCCCcccc-c--ccccCCcceEEEEeChhhHHHH
Q 042754           11 KRIVFVTVGTT----CFDALVKAVDTLEVKQELTR-RGYTHLLIQMGRGTYVPT-K--SLGEDGLMAVDYFTFSSSIADH   82 (178)
Q Consensus        11 ~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~-~~~~~vvv~~G~~~~~~~-~--~~~~~~~~nv~v~~~~~~~~~~   82 (178)
                      .+.++++.|..    +...+.+++      ..+.. .+. ++ ++.|....... .  ........++.+.++.+++.++
T Consensus       196 ~~~~il~~g~l~~~K~~~~li~a~------~~l~~~~~~-~l-~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~  267 (371)
T cd04962         196 GEKVLIHISNFRPVKRIDDVIRIF------AKVRKEVPA-RL-LLVGDGPERSPAERLARELGLQDDVLFLGKQDHVEEL  267 (371)
T ss_pred             CCeEEEEecccccccCHHHHHHHH------HHHHhcCCc-eE-EEEcCCcCHHHHHHHHHHcCCCceEEEecCcccHHHH
Confidence            34567777754    455555554      23332 343 54 44565432111 1  0011234579999999999999


Q ss_pred             hhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHHccC
Q 042754           83 LRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIAGMD  150 (178)
Q Consensus        83 ~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~~l~  150 (178)
                      |+.||++|.-    +...++.|++++|+|+|+-...        ..++.+.+...|+..   +.+++.+++.++.
T Consensus       268 ~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~--------~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~  334 (371)
T cd04962         268 LSIADLFLLPSEKESFGLAALEAMACGVPVVASNAG--------GIPEVVKHGETGFLVDVGDVEAMAEYALSLL  334 (371)
T ss_pred             HHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCC--------CchhhhcCCCceEEcCCCCHHHHHHHHHHHH
Confidence            9999999954    3457999999999999975432        134455554445433   6778888887764

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=98.11  E-value=0.00012  Score=60.56  Aligned_cols=147  Identities=16%  Similarity=0.121  Sum_probs=86.7

Q ss_pred             CCcEEEEEeCCc------cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHh
Q 042754           10 LKRIVFVTVGTT------CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHL   83 (178)
Q Consensus        10 ~~~~ilVt~Gs~------~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~   83 (178)
                      +.+.|++=.-+.      +...+...+     ++.|.+.+. . |+.......++....  .  -++.+.+-.=+..+++
T Consensus       178 ~~~yIvvR~~~~~A~y~~~~~~i~~~i-----i~~L~~~~~-~-vV~ipr~~~~~~~~~--~--~~~~i~~~~vd~~~Ll  246 (335)
T PF04007_consen  178 DEPYIVVRPEAWKASYDNGKKSILPEI-----IEELEKYGR-N-VVIIPRYEDQRELFE--K--YGVIIPPEPVDGLDLL  246 (335)
T ss_pred             CCCEEEEEeccccCeeecCccchHHHH-----HHHHHhhCc-e-EEEecCCcchhhHHh--c--cCccccCCCCCHHHHH
Confidence            467777766543      222333333     556666653 4 444443332221111  1  1233332211355899


Q ss_pred             hhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChhhHHHHHHccCcc--cCCCCCCC
Q 042754           84 RSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-AHPQSLHQVIAGMDLE--SLLPYQPG  160 (178)
Q Consensus        84 ~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~~~~~L~~~i~~l~~~--~~~~~~~~  160 (178)
                      ..||++|+-|| +...||..+|+|+|-+ ++    +.-...=+++.+.|+.+. .+++++.+.+.+....  +.+.....
T Consensus       247 ~~a~l~Ig~gg-TMa~EAA~LGtPaIs~-~~----g~~~~vd~~L~~~Gll~~~~~~~ei~~~v~~~~~~~~~~~~~~~~  320 (335)
T PF04007_consen  247 YYADLVIGGGG-TMAREAALLGTPAISC-FP----GKLLAVDKYLIEKGLLYHSTDPDEIVEYVRKNLGKRKKIREKKSE  320 (335)
T ss_pred             HhcCEEEeCCc-HHHHHHHHhCCCEEEe-cC----CcchhHHHHHHHCCCeEecCCHHHHHHHHHHhhhcccchhhhhcc
Confidence            99999999555 8899999999999975 33    222234477899999764 4888888877766432  22222234


Q ss_pred             Chh-HHHHHHHHhc
Q 042754          161 DAT-PVAKLINRFL  173 (178)
Q Consensus       161 ~~~-~i~~~i~~~~  173 (178)
                      +.. .|.+.|++.+
T Consensus       321 d~~~~i~~~i~~~~  334 (335)
T PF04007_consen  321 DPTDLIIEEIEEYI  334 (335)
T ss_pred             CHHHHHHHHHHHhh
Confidence            555 7777777654

They are found in archaea and some bacteria and have no known function.

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.10  E-value=6.4e-05  Score=59.74  Aligned_cols=123  Identities=20%  Similarity=0.239  Sum_probs=75.1

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhC--CCCeEEEEEeCCCccccc---ccccCCcceEEEEeChhhHH
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTRR--GYTHLLIQMGRGTYVPTK---SLGEDGLMAVDYFTFSSSIA   80 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~--~~~~vvv~~G~~~~~~~~---~~~~~~~~nv~v~~~~~~~~   80 (178)
                      +.+.++++.|+.    +...+.+++      ..+...  ++ ++++ +|........   ........++.+.++.+++.
T Consensus       187 ~~~~~i~~~g~~~~~k~~~~~i~~~------~~l~~~~~~~-~l~i-~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~  258 (353)
T cd03811         187 PDGPVILAVGRLSPQKGFDTLIRAF------ALLRKEGPDA-RLVI-LGDGPLREELEALAKELGLADRVHFLGFQSNPY  258 (353)
T ss_pred             CCceEEEEEecchhhcChHHHHHHH------HHhhhcCCCc-eEEE-EcCCccHHHHHHHHHhcCCCccEEEecccCCHH
Confidence            456778888875    333444444      333332  44 5544 5654321111   00112346889999999999


Q ss_pred             HHhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHHc
Q 042754           81 DHLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIAG  148 (178)
Q Consensus        81 ~~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~~  148 (178)
                      +++..||++|.-    +..+++.|++++|+|+|+-...        ...+.+.+...|+..   +++.+.+.+..
T Consensus       259 ~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~--------~~~e~i~~~~~g~~~~~~~~~~~~~~~~~  325 (353)
T cd03811         259 PYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP--------GPREILEDGENGLLVPVGDEAALAAAALA  325 (353)
T ss_pred             HHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC--------ChHHHhcCCCceEEECCCCHHHHHHHHHH
Confidence            999999999964    3357899999999999974332        245566666666654   45556333333

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.09  E-value=7.9e-05  Score=61.48  Aligned_cols=76  Identities=14%  Similarity=0.176  Sum_probs=56.9

Q ss_pred             cceEEEEeChh--hHHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---
Q 042754           67 LMAVDYFTFSS--SIADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---  137 (178)
Q Consensus        67 ~~nv~v~~~~~--~~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---  137 (178)
                      ..++.+.+|++  ++..+++.||++++.+    -..++.|++++|+|+|+-...    +    ..+.+++.+.|+..   
T Consensus       282 ~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~----~----~~e~i~~~~~g~~~~~~  353 (398)
T cd03800         282 IDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVG----G----PRDIVVDGVTGLLVDPR  353 (398)
T ss_pred             CceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCEEECCCC----C----HHHHccCCCCeEEeCCC
Confidence            36899999975  5888999999999542    246899999999999874432    2    34456665666644   


Q ss_pred             ChhhHHHHHHccC
Q 042754          138 HPQSLHQVIAGMD  150 (178)
Q Consensus       138 ~~~~L~~~i~~l~  150 (178)
                      +++++.++|.++.
T Consensus       354 ~~~~l~~~i~~l~  366 (398)
T cd03800         354 DPEALAAALRRLL  366 (398)
T ss_pred             CHHHHHHHHHHHH
Confidence            6888999998875

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=98.08  E-value=5e-05  Score=65.16  Aligned_cols=123  Identities=12%  Similarity=0.168  Sum_probs=75.3

Q ss_pred             cEEEEEeCCccHHHHHHHhccHHHHHHHHhC-CCCeEEEEEeCCCcccccccccCCcceEEEEeCh--hhHHHHhhhccE
Q 042754           12 RIVFVTVGTTCFDALVKAVDTLEVKQELTRR-GYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS--SSIADHLRSASL   88 (178)
Q Consensus        12 ~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~-~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~--~~~~~~~~~adl   88 (178)
                      +.++++.|+.+...-.+.+     ++.+... ++ +++ ++|............ ...++.+.+|+  +++..+|+.||+
T Consensus       263 ~~~i~~vGrl~~~K~~~~l-----i~a~~~~~~~-~l~-ivG~G~~~~~l~~~~-~~~~V~f~G~v~~~ev~~~~~~aDv  334 (465)
T PLN02871        263 KPLIVYVGRLGAEKNLDFL-----KRVMERLPGA-RLA-FVGDGPYREELEKMF-AGTPTVFTGMLQGDELSQAYASGDV  334 (465)
T ss_pred             CeEEEEeCCCchhhhHHHH-----HHHHHhCCCc-EEE-EEeCChHHHHHHHHh-ccCCeEEeccCCHHHHHHHHHHCCE
Confidence            4567788987654334444     2223332 43 554 567554321111110 12478888998  569999999999


Q ss_pred             EEecCC----hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh---CCCEEE---eChhhHHHHHHccC
Q 042754           89 VISHAG----SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA---RKHLYC---AHPQSLHQVIAGMD  150 (178)
Q Consensus        89 vIshaG----~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~---~G~~~~---~~~~~L~~~i~~l~  150 (178)
                      +|.-+.    ..++.|++++|+|+|.....    +    ..+.+.+   .+.|+.   .+++.+.++|.++.
T Consensus       335 ~V~pS~~E~~g~~vlEAmA~G~PVI~s~~g----g----~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll  398 (465)
T PLN02871        335 FVMPSESETLGFVVLEAMASGVPVVAARAG----G----IPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL  398 (465)
T ss_pred             EEECCcccccCcHHHHHHHcCCCEEEcCCC----C----cHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence            997653    45799999999999975432    1    2223333   344543   37888998888874

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=98.07  E-value=6e-05  Score=61.06  Aligned_cols=127  Identities=19%  Similarity=0.204  Sum_probs=78.4

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc---ccccCCcceEEEEeCh--hhHH
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK---SLGEDGLMAVDYFTFS--SSIA   80 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~---~~~~~~~~nv~v~~~~--~~~~   80 (178)
                      +.+..+++.|+.    +...+.+.+      ..+...+..--++.+|........   ........++.+.+++  +++.
T Consensus       177 ~~~~~i~~~g~~~~~k~~~~l~~~~------~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~  250 (355)
T cd03799         177 GEPLRILSVGRLVEKKGLDYLLEAL------ALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVR  250 (355)
T ss_pred             CCCeEEEEEeeeccccCHHHHHHHH------HHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHH
Confidence            345667777864    344555544      333332111234456765432110   0001234689999998  4699


Q ss_pred             HHhhhccEEEe----------cCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHH
Q 042754           81 DHLRSASLVIS----------HAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIA  147 (178)
Q Consensus        81 ~~~~~adlvIs----------haG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~  147 (178)
                      .+++.||+++.          -+..+++.|++++|+|.|+.+...        ..+.+.+...++..   +.+++.++|.
T Consensus       251 ~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~--------~~~~i~~~~~g~~~~~~~~~~l~~~i~  322 (355)
T cd03799         251 ELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG--------IPELVEDGETGLLVPPGDPEALADAIE  322 (355)
T ss_pred             HHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC--------cchhhhCCCceEEeCCCCHHHHHHHHH
Confidence            99999999998          345689999999999999855431        12234444355543   6788999998


Q ss_pred             ccC
Q 042754          148 GMD  150 (178)
Q Consensus       148 ~l~  150 (178)
                      ++.
T Consensus       323 ~~~  325 (355)
T cd03799         323 RLL  325 (355)
T ss_pred             HHH
Confidence            875

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=98.07  E-value=4e-05  Score=61.96  Aligned_cols=75  Identities=20%  Similarity=0.241  Sum_probs=53.0

Q ss_pred             cceEEEEeC-h--hhHHHHhhhccEEEec------CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-
Q 042754           67 LMAVDYFTF-S--SSIADHLRSASLVISH------AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-  136 (178)
Q Consensus        67 ~~nv~v~~~-~--~~~~~~~~~adlvIsh------aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-  136 (178)
                      ..++...+. +  +++..+|+.||++|.-      +-.++++|++++|+|+|.-+...         .+.+.+.+.++. 
T Consensus       246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~---------~~~i~~~~~g~~~  316 (366)
T cd03822         246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH---------AEEVLDGGTGLLV  316 (366)
T ss_pred             CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC---------hheeeeCCCcEEE
Confidence            457887755 4  4689999999999942      34568999999999999755431         222344444443 


Q ss_pred             --eChhhHHHHHHccC
Q 042754          137 --AHPQSLHQVIAGMD  150 (178)
Q Consensus       137 --~~~~~L~~~i~~l~  150 (178)
                        .+.+++.+++.++.
T Consensus       317 ~~~d~~~~~~~l~~l~  332 (366)
T cd03822         317 PPGDPAALAEAIRRLL  332 (366)
T ss_pred             cCCCHHHHHHHHHHHH
Confidence              36788999988874

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=98.06  E-value=4.3e-05  Score=63.45  Aligned_cols=149  Identities=18%  Similarity=0.228  Sum_probs=81.4

Q ss_pred             CCCcEEEEEeC--Cc-cHHHHHHHhccHHHHHHHHhC-CCCeEEEEEeCCCccccc--ccccCCcceEEEEeCh--hhHH
Q 042754            9 SLKRIVFVTVG--TT-CFDALVKAVDTLEVKQELTRR-GYTHLLIQMGRGTYVPTK--SLGEDGLMAVDYFTFS--SSIA   80 (178)
Q Consensus         9 ~~~~~ilVt~G--s~-~~~~l~~~~~~~~~~~~l~~~-~~~~vvv~~G~~~~~~~~--~~~~~~~~nv~v~~~~--~~~~   80 (178)
                      ..++.+|||.=  +. ....-.+.+  .++++.+... ++ .+++...++......  ...... .|+++++..  .++-
T Consensus       178 ~~~~~iLvt~H~~t~~~~~~~~~~i--~~~l~~L~~~~~~-~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l  253 (346)
T PF02350_consen  178 APKPYILVTLHPVTNEDNPERLEQI--LEALKALAERQNV-PVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYL  253 (346)
T ss_dssp             TTSEEEEEE-S-CCCCTHH--HHHH--HHHHHHHHHHTTE-EEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHH
T ss_pred             cCCCEEEEEeCcchhcCChHHHHHH--HHHHHHHHhcCCC-cEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHH
Confidence            56789999983  22 212222222  2234455543 55 788877755422111  111122 378777654  3588


Q ss_pred             HHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChhhHHHHHHccCcc------
Q 042754           81 DHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC--AHPQSLHQVIAGMDLE------  152 (178)
Q Consensus        81 ~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~--~~~~~L~~~i~~l~~~------  152 (178)
                      .+|+.|++||+-+| |-.-|+.++|+|+|.+ +..  ..-|.     ....|..+.  .+++++.+++.+++..      
T Consensus       254 ~ll~~a~~vvgdSs-GI~eEa~~lg~P~v~i-R~~--geRqe-----~r~~~~nvlv~~~~~~I~~ai~~~l~~~~~~~~  324 (346)
T PF02350_consen  254 SLLKNADLVVGDSS-GIQEEAPSLGKPVVNI-RDS--GERQE-----GRERGSNVLVGTDPEAIIQAIEKALSDKDFYRK  324 (346)
T ss_dssp             HHHHHESEEEESSH-HHHHHGGGGT--EEEC-SSS---S-HH-----HHHTTSEEEETSSHHHHHHHHHHHHH-HHHHHH
T ss_pred             HHHhcceEEEEcCc-cHHHHHHHhCCeEEEe-cCC--CCCHH-----HHhhcceEEeCCCHHHHHHHHHHHHhChHHHHh
Confidence            99999999999999 4444999999999987 221  11232     223444432  4888999998888532      


Q ss_pred             ---cCCCCCCCChh-HHHHHHH
Q 042754          153 ---SLLPYQPGDAT-PVAKLIN  170 (178)
Q Consensus       153 ---~~~~~~~~~~~-~i~~~i~  170 (178)
                         ...+|.+++++ +|+++|+
T Consensus       325 ~~~~~npYgdG~as~rI~~~Lk  346 (346)
T PF02350_consen  325 LKNRPNPYGDGNASERIVEILK  346 (346)
T ss_dssp             HHCS--TT-SS-HHHHHHHHHH
T ss_pred             hccCCCCCCCCcHHHHHHHhhC
Confidence               23478888888 9998874

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=98.04  E-value=3.4e-05  Score=64.66  Aligned_cols=125  Identities=18%  Similarity=0.227  Sum_probs=73.9

Q ss_pred             EEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhc
Q 042754           13 IVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSA   86 (178)
Q Consensus        13 ~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~a   86 (178)
                      .+++..|+.    +.+.+...+  ..++..+..  .++ ++ ++.|..........  ....+|.+.++++++..+|+.|
T Consensus       225 ~~ilf~G~l~~~k~~~~l~~~~--~~~~~~l~~~~p~~-~l-~ivG~g~~~~~~~l--~~~~~V~~~G~v~~~~~~~~~a  298 (397)
T TIGR03087       225 RVLVFTGAMDYWPNIDAVVWFA--ERVFPAVRARRPAA-EF-YIVGAKPSPAVRAL--AALPGVTVTGSVADVRPYLAHA  298 (397)
T ss_pred             cEEEEEEecCCccCHHHHHHHH--HHHHHHHHHHCCCc-EE-EEECCCChHHHHHh--ccCCCeEEeeecCCHHHHHHhC
Confidence            467777865    344444333  122333332  233 54 45676542211111  1235799999999999999999


Q ss_pred             cEEE--ec--CCh-HHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChhhHHHHHHccC
Q 042754           87 SLVI--SH--AGS-GSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGMD  150 (178)
Q Consensus        87 dlvI--sh--aG~-~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~~~~~L~~~i~~l~  150 (178)
                      |++|  ++  .|. +.+.|++++|+|+|.-+..  .++...     ..+.|+.+..+++++.++|.++.
T Consensus       299 dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~--~~~i~~-----~~~~g~lv~~~~~~la~ai~~ll  360 (397)
T TIGR03087       299 AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEA--AEGIDA-----LPGAELLVAADPADFAAAILALL  360 (397)
T ss_pred             CEEEecccccCCcccHHHHHHHcCCCEEecCcc--cccccc-----cCCcceEeCCCHHHHHHHHHHHH
Confidence            9998  33  232 3699999999999986532  111110     01223333358899999998875

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=97.98  E-value=0.00011  Score=60.72  Aligned_cols=129  Identities=16%  Similarity=0.117  Sum_probs=77.8

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCcccc-cc--cccCCcceEEEEeChhhHH
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPT-KS--LGEDGLMAVDYFTFSSSIA   80 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~-~~--~~~~~~~nv~v~~~~~~~~   80 (178)
                      +.+.++++.|..    |...+.+++  ..+.+...+  .++  .++++|....... ..  .......++.+.++.+++.
T Consensus       192 ~~~~~i~~vGrl~~~Kg~~~li~a~--~~l~~~~~~~~~~~--~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~  267 (374)
T TIGR03088       192 DESVVVGTVGRLQAVKDQPTLVRAF--ALLVRQLPEGAERL--RLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVP  267 (374)
T ss_pred             CCCeEEEEEecCCcccCHHHHHHHH--HHHHHhCcccccce--EEEEecCCchHHHHHHHHHHcCCcceEEEcCCcCCHH
Confidence            356788888864    455666665  211111111  122  4455675432111 10  0011234677777888899


Q ss_pred             HHhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE---eChhhHHHHHHccC
Q 042754           81 DHLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC---AHPQSLHQVIAGMD  150 (178)
Q Consensus        81 ~~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~---~~~~~L~~~i~~l~  150 (178)
                      .+|+.||++|.-    |-..++.||+++|+|+|+-...    +    +.+.+.+...++.   .+++++.++|.++.
T Consensus       268 ~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g----~~e~i~~~~~g~~~~~~d~~~la~~i~~l~  336 (374)
T TIGR03088       268 ALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVG----G----NPELVQHGVTGALVPPGDAVALARALQPYV  336 (374)
T ss_pred             HHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCC----C----cHHHhcCCCceEEeCCCCHHHHHHHHHHHH
Confidence            999999999943    3467999999999999974432    1    3334444444543   37888999998874

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.95  E-value=0.00015  Score=58.98  Aligned_cols=93  Identities=17%  Similarity=0.177  Sum_probs=62.1

Q ss_pred             eEEEEEeCCCcccccccccCCcceEEEEeChh---hHHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCC
Q 042754           46 HLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSS---SIADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMD  118 (178)
Q Consensus        46 ~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~---~~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~  118 (178)
                      -.++.+|........    ....++...+|++   ++..+|+.||++|.-+    .++++.|++++|+|+|+.....   
T Consensus       226 ~~~~i~G~~~~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~---  298 (365)
T cd03825         226 IELVVFGASDPEIPP----DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGG---  298 (365)
T ss_pred             eEEEEeCCCchhhhc----cCCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCC---
Confidence            355667765532221    1235788888887   4888999999999954    3589999999999998754431   


Q ss_pred             chHHHHHHHHHhCCCEEE---eChhhHHHHHHccC
Q 042754          119 NHQSELAEELAARKHLYC---AHPQSLHQVIAGMD  150 (178)
Q Consensus       119 ~~Q~~nA~~l~~~G~~~~---~~~~~L~~~i~~l~  150 (178)
                           ..+.+.+.+.++.   .+++++.+++.++.
T Consensus       299 -----~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~  328 (365)
T cd03825         299 -----IPDIVDHGVTGYLAKPGDPEDLAEGIEWLL  328 (365)
T ss_pred             -----ChhheeCCCceEEeCCCCHHHHHHHHHHHH
Confidence                 1122333334433   26788999888875

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.91  E-value=0.0001  Score=59.74  Aligned_cols=122  Identities=20%  Similarity=0.219  Sum_probs=74.0

Q ss_pred             CcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccc-c--ccccCCcceEEEEeChhh--HHH
Q 042754           11 KRIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPT-K--SLGEDGLMAVDYFTFSSS--IAD   81 (178)
Q Consensus        11 ~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~-~--~~~~~~~~nv~v~~~~~~--~~~   81 (178)
                      .+.++++.|+.    +...+++++      ..+.  ++ ++ +++|....... .  ........||.+.+|+++  +..
T Consensus       190 ~~~~i~~~G~~~~~K~~~~li~a~------~~l~--~~-~l-~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~  259 (357)
T cd03795         190 GRPFFLFVGRLVYYKGLDVLLEAA------AALP--DA-PL-VIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAA  259 (357)
T ss_pred             CCcEEEEecccccccCHHHHHHHH------Hhcc--Cc-EE-EEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHH
Confidence            45567788865    334444443      2232  34 44 44565432111 0  001123468999999864  889


Q ss_pred             HhhhccEEEec------CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe---ChhhHHHHHHccC
Q 042754           82 HLRSASLVISH------AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-RKHLYCA---HPQSLHQVIAGMD  150 (178)
Q Consensus        82 ~~~~adlvIsh------aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-~G~~~~~---~~~~L~~~i~~l~  150 (178)
                      +++.||++|.-      +.+.++.|++++|+|+|+-....    ...    .+.+ .+.|+..   +++.+.++|.++.
T Consensus       260 ~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~----~~~----~i~~~~~~g~~~~~~d~~~~~~~i~~l~  330 (357)
T cd03795         260 LLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGT----GGS----YVNLHGVTGLVVPPGDPAALAEAIRRLL  330 (357)
T ss_pred             HHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCC----chh----HHhhCCCceEEeCCCCHHHHHHHHHHHH
Confidence            99999999832      33568999999999999854431    222    2222 3445433   6888999998885

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=97.89  E-value=6.5e-05  Score=53.06  Aligned_cols=75  Identities=17%  Similarity=0.230  Sum_probs=48.4

Q ss_pred             cceEEEEeChhhHHHHhhhccEEEecC-----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eCh
Q 042754           67 LMAVDYFTFSSSIADHLRSASLVISHA-----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC--AHP  139 (178)
Q Consensus        67 ~~nv~v~~~~~~~~~~~~~adlvIsha-----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~--~~~  139 (178)
                      ..++++.+|++++.++++.||++|.-.     -.+++.|++++|+|.|+-+.         ......+..+.+..  .++
T Consensus        52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~---------~~~~~~~~~~~~~~~~~~~  122 (135)
T PF13692_consen   52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN---------GAEGIVEEDGCGVLVANDP  122 (135)
T ss_dssp             HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH---------HCHCHS---SEEEE-TT-H
T ss_pred             CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc---------chhhheeecCCeEEECCCH
Confidence            358999999999999999999998732     24899999999999998543         11223333444443  388


Q ss_pred             hhHHHHHHccC
Q 042754          140 QSLHQVIAGMD  150 (178)
Q Consensus       140 ~~L~~~i~~l~  150 (178)
                      +++.++|.++.
T Consensus       123 ~~l~~~i~~l~  133 (135)
T PF13692_consen  123 EELAEAIERLL  133 (135)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999998764

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=97.88  E-value=0.00028  Score=59.06  Aligned_cols=76  Identities=14%  Similarity=0.078  Sum_probs=54.7

Q ss_pred             cceEEEEeChh--hHHHHhhhccEEEecCC-----hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE-E--
Q 042754           67 LMAVDYFTFSS--SIADHLRSASLVISHAG-----SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLY-C--  136 (178)
Q Consensus        67 ~~nv~v~~~~~--~~~~~~~~adlvIshaG-----~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~-~--  136 (178)
                      ..++.+.++++  ++..+|+.||++|.-+.     ..++.|++++|+|+|.-...    +    +.+.+.+...|+ .  
T Consensus       256 ~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g----~~Eiv~~~~~G~~l~~  327 (380)
T PRK15484        256 GDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----G----ITEFVLEGITGYHLAE  327 (380)
T ss_pred             CCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCC----C----cHhhcccCCceEEEeC
Confidence            35788888874  69999999999996432     36889999999999975432    1    334444443444 2  


Q ss_pred             -eChhhHHHHHHccC
Q 042754          137 -AHPQSLHQVIAGMD  150 (178)
Q Consensus       137 -~~~~~L~~~i~~l~  150 (178)
                       .+++.|.++|.++.
T Consensus       328 ~~d~~~la~~I~~ll  342 (380)
T PRK15484        328 PMTSDSIISDINRTL  342 (380)
T ss_pred             CCCHHHHHHHHHHHH
Confidence             37899999998875

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=97.87  E-value=0.00037  Score=58.93  Aligned_cols=125  Identities=16%  Similarity=0.273  Sum_probs=77.4

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhC--CCCeEEEEEeCCCcccc-c--ccccCCcceEEEEeChh--h
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTRR--GYTHLLIQMGRGTYVPT-K--SLGEDGLMAVDYFTFSS--S   78 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~--~~~~vvv~~G~~~~~~~-~--~~~~~~~~nv~v~~~~~--~   78 (178)
                      +.+..+++.|..    |...+++++      ..+.+.  ++ ++ ++.|.+..... .  ........+|.+.+|.+  +
T Consensus       220 ~~~~~il~vGrl~~~Kg~~~ll~a~------~~l~~~~~~~-~l-~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~e  291 (406)
T PRK15427        220 ATPLEIISVARLTEKKGLHVAIEAC------RQLKEQGVAF-RY-RILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHE  291 (406)
T ss_pred             CCCeEEEEEeCcchhcCHHHHHHHH------HHHHhhCCCE-EE-EEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHH
Confidence            345667888865    455566555      233332  33 44 45666543211 1  00112346799999985  5


Q ss_pred             HHHHhhhccEEEecC---------C-hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE---eChhhHHHH
Q 042754           79 IADHLRSASLVISHA---------G-SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC---AHPQSLHQV  145 (178)
Q Consensus        79 ~~~~~~~adlvIsha---------G-~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~---~~~~~L~~~  145 (178)
                      +.++|+.||++|.-+         | ..+++|++++|+|+|.-...    +    ..+.+.+...|+.   .+++.|.++
T Consensus       292 l~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~----g----~~E~v~~~~~G~lv~~~d~~~la~a  363 (406)
T PRK15427        292 VKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHS----G----IPELVEADKSGWLVPENDAQALAQR  363 (406)
T ss_pred             HHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCC----C----chhhhcCCCceEEeCCCCHHHHHHH
Confidence            889999999998632         2 36899999999999975432    1    2334444434543   378889999


Q ss_pred             HHccC
Q 042754          146 IAGMD  150 (178)
Q Consensus       146 i~~l~  150 (178)
                      |.++.
T Consensus       364 i~~l~  368 (406)
T PRK15427        364 LAAFS  368 (406)
T ss_pred             HHHHH
Confidence            88874

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.79  E-value=0.00025  Score=59.48  Aligned_cols=136  Identities=15%  Similarity=0.162  Sum_probs=85.2

Q ss_pred             CCCCcEEEEEeCCccH--HHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCcccc-cccccCCcceEEEEeChhhHHHH
Q 042754            8 VSLKRIVFVTVGTTCF--DALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPT-KSLGEDGLMAVDYFTFSSSIADH   82 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~-~~~~~~~~~nv~v~~~~~~~~~~   82 (178)
                      +++++.|.+.-||-..  ..+...+  .+....+.+  .+. ++++.+-+...... .........++.+.....+-.++
T Consensus       181 ~~~~~iIaLLPGSR~~EI~rllP~~--l~aa~~l~~~~p~l-~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  257 (373)
T PF02684_consen  181 DPDKPIIALLPGSRKSEIKRLLPIF--LEAAKLLKKQRPDL-QFVVPVAPEVHEELIEEILAEYPPDVSIVIIEGESYDA  257 (373)
T ss_pred             CCCCcEEEEeCCCCHHHHHHHHHHH--HHHHHHHHHhCCCe-EEEEecCCHHHHHHHHHHHHhhCCCCeEEEcCCchHHH
Confidence            4578899999999743  3444444  223344443  244 66666555433220 00000112233333333356789


Q ss_pred             hhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE-----------------EeChhhHHHH
Q 042754           83 LRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLY-----------------CAHPQSLHQV  145 (178)
Q Consensus        83 ~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~-----------------~~~~~~L~~~  145 (178)
                      |.+||+++..+| +.+.|+..+|+|+|++-..   ..=.+..|+++.+..+.-                 ..+++.|.+.
T Consensus       258 m~~ad~al~~SG-TaTLE~Al~g~P~Vv~Yk~---~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~  333 (373)
T PF02684_consen  258 MAAADAALAASG-TATLEAALLGVPMVVAYKV---SPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAE  333 (373)
T ss_pred             HHhCcchhhcCC-HHHHHHHHhCCCEEEEEcC---cHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHH
Confidence            999999999999 7889999999999987654   234678999998876532                 0267778777


Q ss_pred             HHccC
Q 042754          146 IAGMD  150 (178)
Q Consensus       146 i~~l~  150 (178)
                      +.+++
T Consensus       334 ~~~ll  338 (373)
T PF02684_consen  334 LLELL  338 (373)
T ss_pred             HHHHh
Confidence            77764

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>PLN02275 transferase, transferring glycosyl groups

Probab=97.75  E-value=0.00048  Score=57.42  Aligned_cols=74  Identities=19%  Similarity=0.200  Sum_probs=52.7

Q ss_pred             ceEEEEe-Ch--hhHHHHhhhccEEEe----cCC---hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe
Q 042754           68 MAVDYFT-FS--SSIADHLRSASLVIS----HAG---SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA  137 (178)
Q Consensus        68 ~nv~v~~-~~--~~~~~~~~~adlvIs----haG---~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~  137 (178)
                      .|+..++ |.  +++..+|+.||++|.    ..|   .+++.|++++|+|+|.....    +    +.+.+++.+.|+..
T Consensus       286 ~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g----~~eiv~~g~~G~lv  357 (371)
T PLN02275        286 RHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----C----IGELVKDGKNGLLF  357 (371)
T ss_pred             CceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCC----C----hHHHccCCCCeEEE
Confidence            4566666 44  579999999999984    212   46899999999999985432    1    45556665556543


Q ss_pred             -ChhhHHHHHHcc
Q 042754          138 -HPQSLHQVIAGM  149 (178)
Q Consensus       138 -~~~~L~~~i~~l  149 (178)
                       +++.|.++|.++
T Consensus       358 ~~~~~la~~i~~l  370 (371)
T PLN02275        358 SSSSELADQLLEL  370 (371)
T ss_pred             CCHHHHHHHHHHh
Confidence             778888888775

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.75  E-value=0.00013  Score=59.69  Aligned_cols=119  Identities=17%  Similarity=0.165  Sum_probs=74.2

Q ss_pred             EEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhh--HHHHhhhc
Q 042754           13 IVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSS--IADHLRSA   86 (178)
Q Consensus        13 ~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~--~~~~~~~a   86 (178)
                      ..+++.|..    +.+.+++++         ...+. +++ ++|..........  ....||.+.+++++  +..+|+.|
T Consensus       196 ~~il~~G~~~~~K~~~~li~a~---------~~~~~-~l~-ivG~g~~~~~l~~--~~~~~V~~~g~~~~~~~~~~~~~a  262 (351)
T cd03804         196 DYYLSVGRLVPYKRIDLAIEAF---------NKLGK-RLV-VIGDGPELDRLRA--KAGPNVTFLGRVSDEELRDLYARA  262 (351)
T ss_pred             CEEEEEEcCccccChHHHHHHH---------HHCCC-cEE-EEECChhHHHHHh--hcCCCEEEecCCCHHHHHHHHHhC
Confidence            346677765    333444333         33344 654 4565432111111  23478999999976  88999999


Q ss_pred             cEEEecC---ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHHccCcc
Q 042754           87 SLVISHA---GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIAGMDLE  152 (178)
Q Consensus        87 dlvIsha---G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~~l~~~  152 (178)
                      |++|.-.   -+.++.|++++|+|+|......        ..+.+.+.+.|+..   +++.|.++|.++.++
T Consensus       263 d~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~--------~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~  326 (351)
T cd03804         263 RAFLFPAEEDFGIVPVEAMASGTPVIAYGKGG--------ALETVIDGVTGILFEEQTVESLAAAVERFEKN  326 (351)
T ss_pred             CEEEECCcCCCCchHHHHHHcCCCEEEeCCCC--------CcceeeCCCCEEEeCCCCHHHHHHHHHHHHhC
Confidence            9999532   2367899999999999865432        12234444455433   678899999888543

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=97.73  E-value=0.0003  Score=57.99  Aligned_cols=126  Identities=20%  Similarity=0.157  Sum_probs=77.3

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccc---ccccCCcceEEEEeChhhHH
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTK---SLGEDGLMAVDYFTFSSSIA   80 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~---~~~~~~~~nv~v~~~~~~~~   80 (178)
                      .++..+++.|..    +...+++++      ..+..  .++ ++++ +|........   ........++.+.+|.+++.
T Consensus       202 ~~~~~i~~vgrl~~~K~~~~li~a~------~~l~~~~~~~-~l~i-~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~  273 (372)
T cd04949         202 RKPHKIITVARLAPEKQLDQLIKAF------AKVVKQVPDA-TLDI-YGYGDEEEKLKELIEELGLEDYVFLKGYTRDLD  273 (372)
T ss_pred             cCCCeEEEEEccCcccCHHHHHHHH------HHHHHhCCCc-EEEE-EEeCchHHHHHHHHHHcCCcceEEEcCCCCCHH
Confidence            345567788865    344555554      22322  233 5544 5544321110   01112345788888888999


Q ss_pred             HHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE---eChhhHHHHHHccC
Q 042754           81 DHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC---AHPQSLHQVIAGMD  150 (178)
Q Consensus        81 ~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~---~~~~~L~~~i~~l~  150 (178)
                      .+|+.||++|.-+    ...++.||+++|+|+|......   +    ....+.+...|+.   .++++|.++|.++.
T Consensus       274 ~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g----~~~~v~~~~~G~lv~~~d~~~la~~i~~ll  343 (372)
T cd04949         274 EVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---G----PSEIIEDGENGYLVPKGDIEALAEAIIELL  343 (372)
T ss_pred             HHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---C----cHHHcccCCCceEeCCCcHHHHHHHHHHHH
Confidence            9999999998643    3569999999999999854331   1    2233444334443   27889999998885

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=97.72  E-value=0.00054  Score=57.25  Aligned_cols=76  Identities=14%  Similarity=0.144  Sum_probs=54.6

Q ss_pred             cceEEEEeCh--hhHHHHhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---
Q 042754           67 LMAVDYFTFS--SSIADHLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---  137 (178)
Q Consensus        67 ~~nv~v~~~~--~~~~~~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---  137 (178)
                      ..++.+.+++  +++..+|+.||++|.-    +.+.++.|++++|+|+|+.....        ..+.+.+...++..   
T Consensus       282 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~--------~~e~i~~~~~g~~~~~~  353 (405)
T TIGR03449       282 ADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGG--------LPVAVADGETGLLVDGH  353 (405)
T ss_pred             CceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCC--------cHhhhccCCceEECCCC
Confidence            3578888887  4588999999998853    33478999999999999865431        22334444455532   


Q ss_pred             ChhhHHHHHHccC
Q 042754          138 HPQSLHQVIAGMD  150 (178)
Q Consensus       138 ~~~~L~~~i~~l~  150 (178)
                      +++.+.++|.++.
T Consensus       354 d~~~la~~i~~~l  366 (405)
T TIGR03449       354 DPADWADALARLL  366 (405)
T ss_pred             CHHHHHHHHHHHH
Confidence            7788888888774

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.64  E-value=0.00011  Score=59.40  Aligned_cols=124  Identities=19%  Similarity=0.252  Sum_probs=73.7

Q ss_pred             CcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhC--CCCeEEEEEeCCCccccc-cc---ccCCcceEEEEeCh--hh
Q 042754           11 KRIVFVTVGTT----CFDALVKAVDTLEVKQELTRR--GYTHLLIQMGRGTYVPTK-SL---GEDGLMAVDYFTFS--SS   78 (178)
Q Consensus        11 ~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~--~~~~vvv~~G~~~~~~~~-~~---~~~~~~nv~v~~~~--~~   78 (178)
                      .+.+++..|+.    +...+.+.+      ..+...  ++ ++ +++|........ ..   ......++++.+++  ++
T Consensus       194 ~~~~i~~~G~~~~~K~~~~~l~~~------~~~~~~~~~~-~l-~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~  265 (365)
T cd03809         194 PRPYFLYVGTIEPRKNLERLLEAF------ARLPAKGPDP-KL-VIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEE  265 (365)
T ss_pred             CCCeEEEeCCCccccCHHHHHHHH------HHHHHhcCCC-CE-EEecCCccccHHHHHHHHHcCCCCeEEECCCCChhH
Confidence            34567777765    344455554      333332  23 44 455654321111 00   11235689999998  45


Q ss_pred             HHHHhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChhhHHHHHHccC
Q 042754           79 IADHLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-AHPQSLHQVIAGMD  150 (178)
Q Consensus        79 ~~~~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~~~~~L~~~i~~l~  150 (178)
                      +..+++.||++|.-    +..++++|++++|+|+|+-....        ..+.+.+.|..+. .+.+++.++|.++.
T Consensus       266 ~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~--------~~e~~~~~~~~~~~~~~~~~~~~i~~l~  334 (365)
T cd03809         266 LAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS--------LPEVAGDAALYFDPLDPEALAAAIERLL  334 (365)
T ss_pred             HHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC--------ccceecCceeeeCCCCHHHHHHHHHHHh
Confidence            88999999998854    23468999999999999744321        1112233444332 36888999988864

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.61  E-value=0.00085  Score=56.23  Aligned_cols=127  Identities=15%  Similarity=0.136  Sum_probs=74.2

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccc-c--ccccCCcceEEEEeCh--hhHH
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPT-K--SLGEDGLMAVDYFTFS--SSIA   80 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~-~--~~~~~~~~nv~v~~~~--~~~~   80 (178)
                      +.+.++++.|..    |...+++++      ..+.+....-.+++.|....... .  ........++...+++  +++.
T Consensus       191 ~~~~~i~~~grl~~~Kg~~~li~a~------~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~  264 (398)
T cd03796         191 NDKITIVVISRLVYRKGIDLLVGII------PEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVR  264 (398)
T ss_pred             CCceEEEEEeccchhcCHHHHHHHH------HHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHH
Confidence            355677788864    445555554      23332211134445675432111 1  0001123568888986  4699


Q ss_pred             HHhhhccEEEecC---C-hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChhhHHHHHHccC
Q 042754           81 DHLRSASLVISHA---G-SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-AHPQSLHQVIAGMD  150 (178)
Q Consensus        81 ~~~~~adlvIsha---G-~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~~~~~L~~~i~~l~  150 (178)
                      .+++.||++|.-+   | ..++.||+++|+|+|+-+...        ..+.+.+.+..+. .+++.+.+++.++.
T Consensus       265 ~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg--------~~e~i~~~~~~~~~~~~~~l~~~l~~~l  331 (398)
T cd03796         265 DVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGG--------IPEVLPPDMILLAEPDVESIVRKLEEAI  331 (398)
T ss_pred             HHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEECCCCC--------chhheeCCceeecCCCHHHHHHHHHHHH
Confidence            9999999998643   1 259999999999999755432        1223333222222 37788888888774

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.59  E-value=0.00082  Score=56.91  Aligned_cols=127  Identities=16%  Similarity=0.155  Sum_probs=76.6

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh--------CCCCeEEEEEeCCCcccccccc--cCCcceEEEE-e
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTR--------RGYTHLLIQMGRGTYVPTKSLG--EDGLMAVDYF-T   74 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--------~~~~~vvv~~G~~~~~~~~~~~--~~~~~nv~v~-~   74 (178)
                      +++.++++.|..    +.+.+++++      ..+..        .++ + +++.|...........  ...-.++..+ +
T Consensus       230 ~~~~vi~~~grl~~~K~~~~li~A~------~~l~~~~~~~~~~~~i-~-l~ivG~G~~~~~l~~~~~~~~l~~~~~~~g  301 (415)
T cd03816         230 ERPALLVSSTSWTPDEDFGILLDAL------VAYEKSAATGPKLPKL-L-CIITGKGPLKEKYLERIKELKLKKVTIRTP  301 (415)
T ss_pred             CCceEEEEeccccCCCCHHHHHHHH------HHHHHhhcccccCCCE-E-EEEEecCccHHHHHHHHHHcCCCcEEEEcC
Confidence            456677777754    556666665      22221        123 3 4556765421111000  0111356655 4


Q ss_pred             Ch--hhHHHHhhhccEEEe----cCC---hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChhhHHH
Q 042754           75 FS--SSIADHLRSASLVIS----HAG---SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-AHPQSLHQ  144 (178)
Q Consensus        75 ~~--~~~~~~~~~adlvIs----haG---~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~~~~~L~~  144 (178)
                      |+  +++.++|+.||++|+    ..|   ..++.|++++|+|+|.....        ...+.+++.+.|+. .++++|.+
T Consensus       302 ~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~--------~~~eiv~~~~~G~lv~d~~~la~  373 (415)
T cd03816         302 WLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK--------CIDELVKHGENGLVFGDSEELAE  373 (415)
T ss_pred             cCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCC--------CHHHHhcCCCCEEEECCHHHHHH
Confidence            65  469999999999984    222   56899999999999974332        23455656555654 48899999


Q ss_pred             HHHccCcc
Q 042754          145 VIAGMDLE  152 (178)
Q Consensus       145 ~i~~l~~~  152 (178)
                      +|.++..+
T Consensus       374 ~i~~ll~~  381 (415)
T cd03816         374 QLIDLLSN  381 (415)
T ss_pred             HHHHHHhc
Confidence            99888543

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=97.43  E-value=0.0024  Score=52.84  Aligned_cols=76  Identities=13%  Similarity=0.132  Sum_probs=52.6

Q ss_pred             cceEEEEeCh----hhHHHHhhhccEEEecCC----hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-e
Q 042754           67 LMAVDYFTFS----SSIADHLRSASLVISHAG----SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-A  137 (178)
Q Consensus        67 ~~nv~v~~~~----~~~~~~~~~adlvIshaG----~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~  137 (178)
                      ..++.+.++.    .++..+++.||+++.-+-    ..++.|++++|+|+|+-....        ..+.+.+...++. -
T Consensus       251 ~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~--------~~~~i~~~~~g~~~~  322 (372)
T cd03792         251 DPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGG--------IPLQIEDGETGFLVD  322 (372)
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCC--------chhhcccCCceEEeC
Confidence            3467777775    458899999999997542    469999999999999754331        1233444444543 3


Q ss_pred             ChhhHHHHHHccC
Q 042754          138 HPQSLHQVIAGMD  150 (178)
Q Consensus       138 ~~~~L~~~i~~l~  150 (178)
                      +++.+..+|.++.
T Consensus       323 ~~~~~a~~i~~ll  335 (372)
T cd03792         323 TVEEAAVRILYLL  335 (372)
T ss_pred             CcHHHHHHHHHHH
Confidence            6677777777764

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>PRK10307 putative glycosyl transferase; Provisional

Probab=97.43  E-value=0.0014  Score=55.12  Aligned_cols=126  Identities=16%  Similarity=0.245  Sum_probs=74.1

Q ss_pred             CcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhC-CCCeEEEEEeCCCcccccccc--cCCcceEEEEeChh--hHHH
Q 042754           11 KRIVFVTVGTT----CFDALVKAVDTLEVKQELTRR-GYTHLLIQMGRGTYVPTKSLG--EDGLMAVDYFTFSS--SIAD   81 (178)
Q Consensus        11 ~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~-~~~~vvv~~G~~~~~~~~~~~--~~~~~nv~v~~~~~--~~~~   81 (178)
                      .+.+++..|+.    |...+++++      ..+... ++ ++ ++.|...........  .....||...+|++  ++.+
T Consensus       228 ~~~~i~~~G~l~~~kg~~~li~a~------~~l~~~~~~-~l-~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~  299 (412)
T PRK10307        228 GKKIVLYSGNIGEKQGLELVIDAA------RRLRDRPDL-IF-VICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLPA  299 (412)
T ss_pred             CCEEEEEcCccccccCHHHHHHHH------HHhccCCCe-EE-EEECCChhHHHHHHHHHHcCCCceEEeCCCCHHHHHH
Confidence            45678888875    455565554      233322 33 44 467765421111000  01124788889874  5889


Q ss_pred             HhhhccEEEe--cCC------hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChhhHHHHHHccC
Q 042754           82 HLRSASLVIS--HAG------SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-AHPQSLHQVIAGMD  150 (178)
Q Consensus        82 ~~~~adlvIs--haG------~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~~~~~L~~~i~~l~  150 (178)
                      +|+.||+.|.  +.+      .+.+.|++++|+|+|......   .   ...+.+.+.|+.+. .++++|.++|.++.
T Consensus       300 ~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g---~---~~~~~i~~~G~~~~~~d~~~la~~i~~l~  371 (412)
T PRK10307        300 LLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPG---T---ELGQLVEGIGVCVEPESVEALVAAIAALA  371 (412)
T ss_pred             HHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCC---c---hHHHHHhCCcEEeCCCCHHHHHHHHHHHH
Confidence            9999998653  322      234789999999999866431   1   11222333444332 37889999998874

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=97.42  E-value=0.0022  Score=52.99  Aligned_cols=79  Identities=8%  Similarity=0.053  Sum_probs=54.1

Q ss_pred             CcceEEEEeChhh----HHHHhhhccEEEecCC----hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-
Q 042754           66 GLMAVDYFTFSSS----IADHLRSASLVISHAG----SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-  136 (178)
Q Consensus        66 ~~~nv~v~~~~~~----~~~~~~~adlvIshaG----~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-  136 (178)
                      ...+|.+.+|.++    +.++++.||++|..+-    ..++.|++++|+|+|......   +    ..+.+.+...|+. 
T Consensus       234 l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~---g----~~eiv~~~~~G~lv  306 (359)
T PRK09922        234 IEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMS---G----PRDIIKPGLNGELY  306 (359)
T ss_pred             CCCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCC---C----hHHHccCCCceEEE
Confidence            3468999998754    5666778999996432    689999999999999753121   1    1123433333433 


Q ss_pred             --eChhhHHHHHHccCc
Q 042754          137 --AHPQSLHQVIAGMDL  151 (178)
Q Consensus       137 --~~~~~L~~~i~~l~~  151 (178)
                        .+++++.++|.++..
T Consensus       307 ~~~d~~~la~~i~~l~~  323 (359)
T PRK09922        307 TPGNIDEFVGKLNKVIS  323 (359)
T ss_pred             CCCCHHHHHHHHHHHHh
Confidence              378999999998853

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.37  E-value=0.003  Score=53.39  Aligned_cols=126  Identities=16%  Similarity=0.214  Sum_probs=74.4

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhC--CCCeE-EEEEeCCCcccc-c--ccccCCcceEEEEeChh--
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTRR--GYTHL-LIQMGRGTYVPT-K--SLGEDGLMAVDYFTFSS--   77 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~--~~~~v-vv~~G~~~~~~~-~--~~~~~~~~nv~v~~~~~--   77 (178)
                      +.+..+++.|..    |...+++++      ..+.+.  +. ++ ++..|....... .  ........++...+|++  
T Consensus       228 ~~~~~il~~Grl~~~Kg~~~li~a~------~~l~~~~p~~-~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~  300 (407)
T cd04946         228 DDTLRIVSCSYLVPVKRVDLIIKAL------AALAKARPSI-KIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNS  300 (407)
T ss_pred             CCCEEEEEeeccccccCHHHHHHHH------HHHHHhCCCc-eEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChH
Confidence            456677888864    455566555      233322  12 32 234565432111 1  00011235788899986  


Q ss_pred             hHHHHhhh--ccEEEecCC----hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe----ChhhHHHHHH
Q 042754           78 SIADHLRS--ASLVISHAG----SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA----HPQSLHQVIA  147 (178)
Q Consensus        78 ~~~~~~~~--adlvIshaG----~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~----~~~~L~~~i~  147 (178)
                      ++..++..  ||++|..+-    ..+++||+++|+|+|.-...    +    ..+.+.+.+.|+..    +++++.++|.
T Consensus       301 e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vg----g----~~e~i~~~~~G~l~~~~~~~~~la~~I~  372 (407)
T cd04946         301 EVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVG----G----TPEIVDNGGNGLLLSKDPTPNELVSSLS  372 (407)
T ss_pred             HHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCC----C----cHHHhcCCCcEEEeCCCCCHHHHHHHHH
Confidence            47788865  677775542    57899999999999973322    2    34455554345432    6788999998


Q ss_pred             ccC
Q 042754          148 GMD  150 (178)
Q Consensus       148 ~l~  150 (178)
                      ++.
T Consensus       373 ~ll  375 (407)
T cd04946         373 KFI  375 (407)
T ss_pred             HHH
Confidence            885

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=97.35  E-value=0.00096  Score=50.08  Aligned_cols=49  Identities=18%  Similarity=0.104  Sum_probs=40.0

Q ss_pred             CcceEEEEeCh---hhHHHHhhhccEEEecCC----hHHHHHHHHcCCCEEEEeCC
Q 042754           66 GLMAVDYFTFS---SSIADHLRSASLVISHAG----SGSIFETLRHGKPLIVVVNE  114 (178)
Q Consensus        66 ~~~nv~v~~~~---~~~~~~~~~adlvIshaG----~~Ti~E~l~~g~P~iviP~~  114 (178)
                      ...|+++.+++   +.+..+++.||++|+-..    .++++|++++|+|+|.-+.+
T Consensus       159 ~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~  214 (229)
T cd01635         159 LLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVG  214 (229)
T ss_pred             CcccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCC
Confidence            34689999884   446666677999999886    79999999999999987665

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=97.34  E-value=0.0047  Score=53.85  Aligned_cols=125  Identities=15%  Similarity=0.079  Sum_probs=75.3

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCcccc-c--ccccCCcceEEEEeChhhHH
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPT-K--SLGEDGLMAVDYFTFSSSIA   80 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~-~--~~~~~~~~nv~v~~~~~~~~   80 (178)
                      .++..+++.|..    |...+++++      ..+.+  .++ ++ ++.|.+..... .  ........+|...++. ++.
T Consensus       317 r~~~~il~vGrl~~~Kg~~~li~A~------~~l~~~~p~~-~l-~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~-~~~  387 (500)
T TIGR02918       317 RKPFSIITASRLAKEKHIDWLVKAV------VKAKKSVPEL-TF-DIYGEGGEKQKLQKIINENQAQDYIHLKGHR-NLS  387 (500)
T ss_pred             cCCeEEEEEeccccccCHHHHHHHH------HHHHhhCCCe-EE-EEEECchhHHHHHHHHHHcCCCCeEEEcCCC-CHH
Confidence            345678888975    455666665      22222  233 44 34576543111 1  0111223578888987 589


Q ss_pred             HHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeC-----------hhhHHHH
Q 042754           81 DHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAH-----------PQSLHQV  145 (178)
Q Consensus        81 ~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~~-----------~~~L~~~  145 (178)
                      ++++.||++|.-+    -+.+++||+++|+|+|.....+.       +.+.+++-.-|+...           ++.|+++
T Consensus       388 ~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G-------~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~  460 (500)
T TIGR02918       388 EVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYG-------NPTFIEDNKNGYLIPIDEEEDDEDQIITALAEK  460 (500)
T ss_pred             HHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCC-------CHHHccCCCCEEEEeCCccccchhHHHHHHHHH
Confidence            9999999999743    35799999999999998554311       223333332343321           6778888


Q ss_pred             HHccC
Q 042754          146 IAGMD  150 (178)
Q Consensus       146 i~~l~  150 (178)
                      |.++.
T Consensus       461 I~~ll  465 (500)
T TIGR02918       461 IVEYF  465 (500)
T ss_pred             HHHHh
Confidence            87765

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=97.34  E-value=0.0045  Score=51.75  Aligned_cols=90  Identities=20%  Similarity=0.277  Sum_probs=61.8

Q ss_pred             ceEEEEeCh--hhHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCE-E-E-eChhhH
Q 042754           68 MAVDYFTFS--SSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHL-Y-C-AHPQSL  142 (178)
Q Consensus        68 ~nv~v~~~~--~~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~-~-~-~~~~~L  142 (178)
                      +++.+.+.+  .++..+|+.|+++||-++++ +.|+.++|+|.|.+-.      .|+-.     +.|.. + + .+++++
T Consensus       262 ~~v~l~~~l~~~~~l~Ll~~a~~vitdSSgg-i~EA~~lg~Pvv~l~~------R~e~~-----~~g~nvl~vg~~~~~I  329 (365)
T TIGR03568       262 PNFRLFKSLGQERYLSLLKNADAVIGNSSSG-IIEAPSFGVPTINIGT------RQKGR-----LRADSVIDVDPDKEEI  329 (365)
T ss_pred             CCEEEECCCChHHHHHHHHhCCEEEEcChhH-HHhhhhcCCCEEeecC------Cchhh-----hhcCeEEEeCCCHHHH
Confidence            578877643  36889999999999988644 4999999999997631      23221     33433 3 2 378889


Q ss_pred             HHHHHccCcc--------cCCCCCCCChh-HHHHHH
Q 042754          143 HQVIAGMDLE--------SLLPYQPGDAT-PVAKLI  169 (178)
Q Consensus       143 ~~~i~~l~~~--------~~~~~~~~~~~-~i~~~i  169 (178)
                      .+++.+++..        ...+|.+++++ +|+++|
T Consensus       330 ~~a~~~~~~~~~~~~~~~~~~pygdg~as~rI~~~l  365 (365)
T TIGR03568       330 VKAIEKLLDPAFKKSLKNVKNPYGDGNSSERIIEIL  365 (365)
T ss_pred             HHHHHHHhChHHHHHHhhCCCCCCCChHHHHHHHhC
Confidence            9988886421        13467777777 887753

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.34  E-value=0.0023  Score=55.14  Aligned_cols=124  Identities=13%  Similarity=0.114  Sum_probs=75.1

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCcccc--c-----ccccCCcceEEEEeCh
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPT--K-----SLGEDGLMAVDYFTFS   76 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~--~-----~~~~~~~~nv~v~~~~   76 (178)
                      +.+.+++..|..    |...+++++      ..+.+  .++ ++ ++.|.....+.  .     ........+|+..+ .
T Consensus       291 ~~~~~i~~vGrl~~~Kg~~~li~a~------~~l~~~~p~~-~l-~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G-~  361 (475)
T cd03813         291 KEPPVVGLIGRVVPIKDIKTFIRAA------AIVRKKIPDA-EG-WVIGPTDEDPEYAEECRELVESLGLEDNVKFTG-F  361 (475)
T ss_pred             CCCcEEEEEeccccccCHHHHHHHH------HHHHHhCCCe-EE-EEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC-C
Confidence            345677888875    455565555      23332  233 44 45666532111  0     00012346888888 4


Q ss_pred             hhHHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhC-----C-CEEE---eChhhHH
Q 042754           77 SSIADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR-----K-HLYC---AHPQSLH  143 (178)
Q Consensus        77 ~~~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~-----G-~~~~---~~~~~L~  143 (178)
                      .++.++|+.||++|.-+    -..++.|++++|+|+|.-...    +    ..+.+.+.     | .|+.   .+++.+.
T Consensus       362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g----~----~~elv~~~~~~~~g~~G~lv~~~d~~~la  433 (475)
T cd03813         362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVG----S----CRELIEGADDEALGPAGEVVPPADPEALA  433 (475)
T ss_pred             ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCC----C----hHHHhcCCcccccCCceEEECCCCHHHHH
Confidence            56999999999998653    347999999999999973221    1    23334441     1 3433   3788999


Q ss_pred             HHHHccC
Q 042754          144 QVIAGMD  150 (178)
Q Consensus       144 ~~i~~l~  150 (178)
                      ++|.++.
T Consensus       434 ~ai~~ll  440 (475)
T cd03813         434 RAILRLL  440 (475)
T ss_pred             HHHHHHh
Confidence            9998885

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.33  E-value=0.0034  Score=51.93  Aligned_cols=76  Identities=16%  Similarity=0.141  Sum_probs=53.6

Q ss_pred             cceEEEEeChhh--HHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eC
Q 042754           67 LMAVDYFTFSSS--IADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC--AH  138 (178)
Q Consensus        67 ~~nv~v~~~~~~--~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~--~~  138 (178)
                      ..+|.+.+++++  +..+|..||+++...    -+.++.|++++|+|.|..-.+    +    ..+.+.+.+.++.  .+
T Consensus       279 ~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~----~----~~e~i~~~~~g~~~~~~  350 (392)
T cd03805         279 EDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSG----G----PLETVVDGETGFLCEPT  350 (392)
T ss_pred             CceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCC----C----cHHHhccCCceEEeCCC
Confidence            468999999864  678999999998532    236889999999999985432    1    1223444334443  47


Q ss_pred             hhhHHHHHHccC
Q 042754          139 PQSLHQVIAGMD  150 (178)
Q Consensus       139 ~~~L~~~i~~l~  150 (178)
                      ++++.++|.++.
T Consensus       351 ~~~~a~~i~~l~  362 (392)
T cd03805         351 PEEFAEAMLKLA  362 (392)
T ss_pred             HHHHHHHHHHHH
Confidence            888888888875

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=97.32  E-value=0.022  Score=46.74  Aligned_cols=150  Identities=19%  Similarity=0.185  Sum_probs=86.0

Q ss_pred             CCCcEEEEEeCCc--cH----H---HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccc---cccCCcceEEEEeCh
Q 042754            9 SLKRIVFVTVGTT--CF----D---ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKS---LGEDGLMAVDYFTFS   76 (178)
Q Consensus         9 ~~~~~ilVt~Gs~--~~----~---~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~---~~~~~~~nv~v~~~~   76 (178)
                      ..+|.+.|..|+.  .+    .   .+.+.+     ...+...+. .+.+++..........   ........+.+++-.
T Consensus       144 l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l-----~~~~~~~~~-~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~  217 (311)
T PF06258_consen  144 LPRPRVAVLIGGDSKHYRWDEEDAERLLDQL-----AALAAAYGG-SLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGT  217 (311)
T ss_pred             CCCCeEEEEECcCCCCcccCHHHHHHHHHHH-----HHHHHhCCC-eEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCC
Confidence            3467777776643  22    2   233332     222334453 7888888766432211   111122445455443


Q ss_pred             h--hHHHHhhhccEEEecC-ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChhhHHHHHHccCccc
Q 042754           77 S--SIADHLRSASLVISHA-GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGMDLES  153 (178)
Q Consensus        77 ~--~~~~~~~~adlvIsha-G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~~~~~L~~~i~~l~~~~  153 (178)
                      +  .+..+|+.||.||.-+ ..+-++||++.|+|+.+++.+. ..+-=....+.|.+.|+....+...      .+  ..
T Consensus       218 ~~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L~~~g~~r~~~~~~------~~--~~  288 (311)
T PF06258_consen  218 GENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSLEERGAVRPFTGWR------DL--EQ  288 (311)
T ss_pred             CCCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHHHHCCCEEECCCcc------cc--cc
Confidence            2  2779999999876555 4566899999999999999875 2221123556677788875432110      00  11


Q ss_pred             CCCCCCCChh-HHHHHHHHhc
Q 042754          154 LLPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       154 ~~~~~~~~~~-~i~~~i~~~~  173 (178)
                      ..+|.+-+.+ ++++.|.+.+
T Consensus       289 ~~~~~pl~et~r~A~~i~~r~  309 (311)
T PF06258_consen  289 WTPYEPLDETDRVAAEIRERL  309 (311)
T ss_pred             cccCCCccHHHHHHHHHHHHh
Confidence            4446666766 9998887653

The function of this family is unknown.

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=97.32  E-value=0.0056  Score=50.57  Aligned_cols=74  Identities=11%  Similarity=0.201  Sum_probs=50.4

Q ss_pred             eEEEE-eCh--hhHHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C
Q 042754           69 AVDYF-TFS--SSIADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---H  138 (178)
Q Consensus        69 nv~v~-~~~--~~~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~  138 (178)
                      ++..+ +++  +++..+|+.||++|.-+    .+.+++|++++|+|+|+-...    +    ..+.+++.+.|+..   +
T Consensus       261 ~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~----~~e~i~~~~~G~~~~~~~  332 (388)
T TIGR02149       261 GIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATG----G----IPEVVVDGETGFLVPPDN  332 (388)
T ss_pred             ceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCC----C----HHHHhhCCCceEEcCCCC
Confidence            35544 343  46999999999999743    246889999999999975432    1    34445554455543   4


Q ss_pred             h------hhHHHHHHccC
Q 042754          139 P------QSLHQVIAGMD  150 (178)
Q Consensus       139 ~------~~L~~~i~~l~  150 (178)
                      +      +.|.++|.++.
T Consensus       333 ~~~~~~~~~l~~~i~~l~  350 (388)
T TIGR02149       333 SDADGFQAELAKAINILL  350 (388)
T ss_pred             CcccchHHHHHHHHHHHH
Confidence            4      77888888774

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.32  E-value=0.0031  Score=52.77  Aligned_cols=75  Identities=12%  Similarity=0.107  Sum_probs=54.0

Q ss_pred             ceEEEEeChh--hHHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE---eC
Q 042754           68 MAVDYFTFSS--SIADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC---AH  138 (178)
Q Consensus        68 ~nv~v~~~~~--~~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~---~~  138 (178)
                      .+|.+.++++  ++..+|+.||++|.-+    -..++.|++++|+|+|.-...        ...+.+.+...++.   .+
T Consensus       281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~--------g~~e~i~~~~~G~lv~~~d  352 (396)
T cd03818         281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTA--------PVREVITDGENGLLVDFFD  352 (396)
T ss_pred             ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCC--------CchhhcccCCceEEcCCCC
Confidence            5789899985  5889999999998522    124899999999999974332        23344444334443   37


Q ss_pred             hhhHHHHHHccC
Q 042754          139 PQSLHQVIAGMD  150 (178)
Q Consensus       139 ~~~L~~~i~~l~  150 (178)
                      ++.|.++|.++.
T Consensus       353 ~~~la~~i~~ll  364 (396)
T cd03818         353 PDALAAAVIELL  364 (396)
T ss_pred             HHHHHHHHHHHH
Confidence            899999998875

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.30  E-value=0.0029  Score=50.86  Aligned_cols=76  Identities=16%  Similarity=0.173  Sum_probs=53.4

Q ss_pred             cceEEEEeChhh--HHHHhhhccEEEec-----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eC
Q 042754           67 LMAVDYFTFSSS--IADHLRSASLVISH-----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-AH  138 (178)
Q Consensus        67 ~~nv~v~~~~~~--~~~~~~~adlvIsh-----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~~  138 (178)
                      ..++.+.+|+++  +..+|+.||+++.-     +-..++.|++++|+|+|.-....        +.+.+.+...++. ..
T Consensus       223 ~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~--------~~e~i~~~~~g~l~~~  294 (335)
T cd03802         223 GPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA--------VPEVVEDGVTGFLVDS  294 (335)
T ss_pred             CCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC--------chhheeCCCcEEEeCC
Confidence            468999999864  67899999999853     22468999999999999755431        2233333324443 34


Q ss_pred             hhhHHHHHHccC
Q 042754          139 PQSLHQVIAGMD  150 (178)
Q Consensus       139 ~~~L~~~i~~l~  150 (178)
                      ++++.++|.++.
T Consensus       295 ~~~l~~~l~~l~  306 (335)
T cd03802         295 VEELAAAVARAD  306 (335)
T ss_pred             HHHHHHHHHHHh
Confidence            888999888773

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=97.26  E-value=0.0018  Score=54.02  Aligned_cols=135  Identities=13%  Similarity=0.148  Sum_probs=86.7

Q ss_pred             CCCCCcEEEEEeCCccHH--HHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccccc---ccCCcceEEEEeChhhH
Q 042754            7 SVSLKRIVFVTVGTTCFD--ALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTKSL---GEDGLMAVDYFTFSSSI   79 (178)
Q Consensus         7 ~~~~~~~ilVt~Gs~~~~--~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~~~---~~~~~~nv~v~~~~~~~   79 (178)
                      .+.+++++++.-||-+.+  .+...+  .++...+..  .+. ++++-+-+..+......   ......++.+.+.  +-
T Consensus       184 ~~~~~~~lalLPGSR~sEI~rl~~~f--~~a~~~l~~~~~~~-~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  258 (381)
T COG0763         184 IDADEKTLALLPGSRRSEIRRLLPPF--VQAAQELKARYPDL-KFVLPLVNAKYRRIIEEALKWEVAGLSLILIDG--EK  258 (381)
T ss_pred             CCCCCCeEEEecCCcHHHHHHHHHHH--HHHHHHHHhhCCCc-eEEEecCcHHHHHHHHHHhhccccCceEEecCc--hH
Confidence            345788999999997543  444444  233444542  344 78877766553322211   1000123333333  24


Q ss_pred             HHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE-----------------EeChhhH
Q 042754           80 ADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLY-----------------CAHPQSL  142 (178)
Q Consensus        80 ~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~-----------------~~~~~~L  142 (178)
                      .+.|.+||+++..+| +.+.|+..+|+|+|+.-..   +.=-+..|+++.+..+.-                 ..+++.|
T Consensus       259 ~~a~~~aD~al~aSG-T~tLE~aL~g~P~Vv~Yk~---~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~l  334 (381)
T COG0763         259 RKAFAAADAALAASG-TATLEAALAGTPMVVAYKV---KPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENL  334 (381)
T ss_pred             HHHHHHhhHHHHhcc-HHHHHHHHhCCCEEEEEec---cHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHH
Confidence            579999999999999 6788999999999987554   233567888888876652                 1368888


Q ss_pred             HHHHHccC
Q 042754          143 HQVIAGMD  150 (178)
Q Consensus       143 ~~~i~~l~  150 (178)
                      .+++..++
T Consensus       335 a~~l~~ll  342 (381)
T COG0763         335 ARALEELL  342 (381)
T ss_pred             HHHHHHHh
Confidence            88888775

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=97.23  E-value=0.0066  Score=54.91  Aligned_cols=123  Identities=13%  Similarity=0.121  Sum_probs=73.0

Q ss_pred             cEEEEEeCCc----cHHHHHHHhccHHHHHHHHhC-CCCeEEEEEeCCCcccc-c--ccccCCcceEEEEeChhhHHHHh
Q 042754           12 RIVFVTVGTT----CFDALVKAVDTLEVKQELTRR-GYTHLLIQMGRGTYVPT-K--SLGEDGLMAVDYFTFSSSIADHL   83 (178)
Q Consensus        12 ~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~-~~~~vvv~~G~~~~~~~-~--~~~~~~~~nv~v~~~~~~~~~~~   83 (178)
                      ..++++.|..    |+..+++++.     ..+... ++ + ++++|....... .  ........+|.+.+|.+++..+|
T Consensus       517 ~~vIg~VGRL~~~KG~~~LI~A~a-----~l~~~~p~~-~-LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll  589 (694)
T PRK15179        517 RFTVGTVMRVDDNKRPFLWVEAAQ-----RFAASHPKV-R-FIMVGGGPLLESVREFAQRLGMGERILFTGLSRRVGYWL  589 (694)
T ss_pred             CeEEEEEEeCCccCCHHHHHHHHH-----HHHHHCcCe-E-EEEEccCcchHHHHHHHHHcCCCCcEEEcCCcchHHHHH
Confidence            4466677753    5566666651     112222 33 4 455665432111 1  01112346799999999999999


Q ss_pred             hhccEEEec---CC-hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C--hhhHHHHHHcc
Q 042754           84 RSASLVISH---AG-SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---H--PQSLHQVIAGM  149 (178)
Q Consensus        84 ~~adlvIsh---aG-~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~--~~~L~~~i~~l  149 (178)
                      +.||++|.-   -| .+++.|++++|+|+|.-...    +    ..+.+.+...|+..   +  ++.+.+++.++
T Consensus       590 ~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G----~~EiV~dg~~GlLv~~~d~~~~~La~aL~~l  656 (694)
T PRK15179        590 TQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----G----AGEAVQEGVTGLTLPADTVTAPDVAEALARI  656 (694)
T ss_pred             HhcCEEEeccccccchHHHHHHHHcCCeEEEECCC----C----hHHHccCCCCEEEeCCCCCChHHHHHHHHHH
Confidence            999999863   22 57999999999999975432    1    33344444345433   2  34566666554

>PHA01633 putative glycosyl transferase group 1

Probab=97.21  E-value=0.0041  Score=51.49  Aligned_cols=84  Identities=13%  Similarity=0.136  Sum_probs=55.2

Q ss_pred             cceEEEEe---Ch--hhHHHHhhhccEEEec----CChHHHHHHHHcCCCEEEEeCC---CCCCch-----HHHHHHHHH
Q 042754           67 LMAVDYFT---FS--SSIADHLRSASLVISH----AGSGSIFETLRHGKPLIVVVNE---DLMDNH-----QSELAEELA  129 (178)
Q Consensus        67 ~~nv~v~~---~~--~~~~~~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~---~~~~~~-----Q~~nA~~l~  129 (178)
                      ..+++..+   +.  .++.++++.||++|.-    +=+.++.||+++|+|+|.--.+   +..++.     +..++..+.
T Consensus       200 ~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~  279 (335)
T PHA01633        200 PANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYY  279 (335)
T ss_pred             CCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhc
Confidence            35777764   32  4689999999999974    3357899999999998874222   111110     122343344


Q ss_pred             --hCCCEEE---eChhhHHHHHHccC
Q 042754          130 --ARKHLYC---AHPQSLHQVIAGMD  150 (178)
Q Consensus       130 --~~G~~~~---~~~~~L~~~i~~l~  150 (178)
                        +.|.++.   .+++.+.++|..+.
T Consensus       280 ~~~~g~g~~~~~~d~~~la~ai~~~~  305 (335)
T PHA01633        280 DKEHGQKWKIHKFQIEDMANAIILAF  305 (335)
T ss_pred             CcccCceeeecCCCHHHHHHHHHHHH
Confidence              3566664   48999999998773

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=97.12  E-value=0.0043  Score=52.86  Aligned_cols=75  Identities=12%  Similarity=0.173  Sum_probs=52.3

Q ss_pred             ceEEEEeCh--hhHHHHhhhc----cEEEecC---C-hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-
Q 042754           68 MAVDYFTFS--SSIADHLRSA----SLVISHA---G-SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-  136 (178)
Q Consensus        68 ~nv~v~~~~--~~~~~~~~~a----dlvIsha---G-~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-  136 (178)
                      .+|...+++  +++..+|+.|    |++|.-+   | ..++.|++++|+|+|+-...    +    ..+.+.+...|+. 
T Consensus       317 ~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g----~~eiv~~~~~G~lv  388 (439)
T TIGR02472       317 GKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDG----G----PRDIIANCRNGLLV  388 (439)
T ss_pred             ceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCC----C----cHHHhcCCCcEEEe
Confidence            467777764  4688999877    8988643   2 47999999999999975432    1    3334444334443 


Q ss_pred             --eChhhHHHHHHccC
Q 042754          137 --AHPQSLHQVIAGMD  150 (178)
Q Consensus       137 --~~~~~L~~~i~~l~  150 (178)
                        .+++.|.++|.++.
T Consensus       389 ~~~d~~~la~~i~~ll  404 (439)
T TIGR02472       389 DVLDLEAIASALEDAL  404 (439)
T ss_pred             CCCCHHHHHHHHHHHH
Confidence              37899999998874

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=97.11  E-value=0.0037  Score=52.08  Aligned_cols=73  Identities=19%  Similarity=0.275  Sum_probs=51.4

Q ss_pred             cceEEEEeCh--hhHHHHhhhccEEEec--------CC-hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE
Q 042754           67 LMAVDYFTFS--SSIADHLRSASLVISH--------AG-SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLY  135 (178)
Q Consensus        67 ~~nv~v~~~~--~~~~~~~~~adlvIsh--------aG-~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~  135 (178)
                      ..||+..++.  +++..+++.||+.|.-        ++ .+.+.|++++|+|+|..+.+.        ..+ ..+ |..+
T Consensus       253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~--------~~~-~~~-~~~~  322 (373)
T cd04950         253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPE--------VRR-YED-EVVL  322 (373)
T ss_pred             CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHH--------HHh-hcC-cEEE
Confidence            3689999998  4699999999998852        22 256999999999999755321        111 111 2223


Q ss_pred             E-eChhhHHHHHHcc
Q 042754          136 C-AHPQSLHQVIAGM  149 (178)
Q Consensus       136 ~-~~~~~L~~~i~~l  149 (178)
                      . .+++++.++|.++
T Consensus       323 ~~~d~~~~~~ai~~~  337 (373)
T cd04950         323 IADDPEEFVAAIEKA  337 (373)
T ss_pred             eCCCHHHHHHHHHHH
Confidence            3 3789999999885

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=97.05  E-value=0.02  Score=47.95  Aligned_cols=153  Identities=13%  Similarity=0.189  Sum_probs=93.3

Q ss_pred             CCCCcEEEEEeCC---c--cHHHHHHHhccHHHHHHHHhC-CCCeEEEEEeCCCcccccc-cccCCcceEEEEeCh--hh
Q 042754            8 VSLKRIVFVTVGT---T--CFDALVKAVDTLEVKQELTRR-GYTHLLIQMGRGTYVPTKS-LGEDGLMAVDYFTFS--SS   78 (178)
Q Consensus         8 ~~~~~~ilVt~Gs---~--~~~~l~~~~~~~~~~~~l~~~-~~~~vvv~~G~~~~~~~~~-~~~~~~~nv~v~~~~--~~   78 (178)
                      ..+++.+|||.=-   .  ++..+.+.+     .+.+... ++ .++.-+-.+....... .......++++++-.  -+
T Consensus       201 ~~~~~~iLvT~HRreN~~~~~~~i~~al-----~~i~~~~~~~-~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~  274 (383)
T COG0381         201 DKDKKYILVTAHRRENVGEPLEEICEAL-----REIAEEYPDV-IVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLD  274 (383)
T ss_pred             cccCcEEEEEcchhhcccccHHHHHHHH-----HHHHHhCCCc-eEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHH
Confidence            3456788998752   2  455555554     2222222 33 4444443332111111 001123467776533  25


Q ss_pred             HHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChhhHHHHHHccCc-----
Q 042754           79 IADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC--AHPQSLHQVIAGMDL-----  151 (178)
Q Consensus        79 ~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~--~~~~~L~~~i~~l~~-----  151 (178)
                      +..+|..|-+++|-+| |-.-||..+|+|++++=..    .++.+    ..+.|....  .+.+.+.+++.+++.     
T Consensus       275 f~~L~~~a~~iltDSG-giqEEAp~lg~Pvl~lR~~----TERPE----~v~agt~~lvg~~~~~i~~~~~~ll~~~~~~  345 (383)
T COG0381         275 FHNLMKNAFLILTDSG-GIQEEAPSLGKPVLVLRDT----TERPE----GVEAGTNILVGTDEENILDAATELLEDEEFY  345 (383)
T ss_pred             HHHHHHhceEEEecCC-chhhhHHhcCCcEEeeccC----CCCcc----ceecCceEEeCccHHHHHHHHHHHhhChHHH
Confidence            8899999999999999 6689999999999987433    23443    234554443  367888888887752     


Q ss_pred             ----ccCCCCCCCChh-HHHHHHHHhcCC
Q 042754          152 ----ESLLPYQPGDAT-PVAKLINRFLGF  175 (178)
Q Consensus       152 ----~~~~~~~~~~~~-~i~~~i~~~~~~  175 (178)
                          ..-.+|....++ +|++.|....+.
T Consensus       346 ~~m~~~~npYgdg~as~rIv~~l~~~~~~  374 (383)
T COG0381         346 ERMSNAKNPYGDGNASERIVEILLNYFDS  374 (383)
T ss_pred             HHHhcccCCCcCcchHHHHHHHHHHHhhh
Confidence                334578888777 999999877653

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=97.05  E-value=0.0089  Score=52.64  Aligned_cols=72  Identities=17%  Similarity=0.145  Sum_probs=50.7

Q ss_pred             cceEEEEeChhhHHHHhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---Ch
Q 042754           67 LMAVDYFTFSSSIADHLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HP  139 (178)
Q Consensus        67 ~~nv~v~~~~~~~~~~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~  139 (178)
                      ..+|.+.+|.+++..+|+.||++|.-    +-.+++.|++++|+|+|.-...        .+.+.+.+...|+..   ++
T Consensus       454 ~d~V~FlG~~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvG--------G~~EiV~dG~nG~LVp~~D~  525 (578)
T PRK15490        454 LERILFVGASRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAG--------GSAECFIEGVSGFILDDAQT  525 (578)
T ss_pred             CCcEEECCChhhHHHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCC--------CcHHHcccCCcEEEECCCCh
Confidence            46899999999999999999999963    2357999999999999975432        134445454455543   33


Q ss_pred             hhHHHHH
Q 042754          140 QSLHQVI  146 (178)
Q Consensus       140 ~~L~~~i  146 (178)
                      +.+.+++
T Consensus       526 ~aLa~ai  532 (578)
T PRK15490        526 VNLDQAC  532 (578)
T ss_pred             hhHHHHH
Confidence            4444443

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.87  E-value=0.0063  Score=49.38  Aligned_cols=75  Identities=19%  Similarity=0.208  Sum_probs=49.9

Q ss_pred             cceEEEEeChhh--HHHHhhhccEEEecCCh-----HHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeCh
Q 042754           67 LMAVDYFTFSSS--IADHLRSASLVISHAGS-----GSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHP  139 (178)
Q Consensus        67 ~~nv~v~~~~~~--~~~~~~~adlvIshaG~-----~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~~~  139 (178)
                      ..+|++.+++++  +..++..||+++.+.-.     .++.|++++|+|+|+.....        +.+.+.+.|..+. ..
T Consensus       247 ~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~--------~~e~~~~~g~~~~-~~  317 (363)
T cd04955         247 DPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF--------NREVLGDKAIYFK-VG  317 (363)
T ss_pred             CCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCc--------cceeecCCeeEec-Cc
Confidence            468999999854  67899999999876533     58999999999999765432        1112223333332 22


Q ss_pred             hhHHHHHHccC
Q 042754          140 QSLHQVIAGMD  150 (178)
Q Consensus       140 ~~L~~~i~~l~  150 (178)
                      +.+.+++.++.
T Consensus       318 ~~l~~~i~~l~  328 (363)
T cd04955         318 DDLASLLEELE  328 (363)
T ss_pred             hHHHHHHHHHH
Confidence            22888887764

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PLN02846 digalactosyldiacylglycerol synthase

Probab=96.77  E-value=0.027  Score=48.66  Aligned_cols=122  Identities=11%  Similarity=0.084  Sum_probs=71.6

Q ss_pred             EEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCcccc-cccccCCcceEEEEeChhhHHHHhhh
Q 042754           13 IVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPT-KSLGEDGLMAVDYFTFSSSIADHLRS   85 (178)
Q Consensus        13 ~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~-~~~~~~~~~nv~v~~~~~~~~~~~~~   85 (178)
                      .++++.|-.    +...+++++      ..+..  .++ + +++.|.+..... +......+.++.++....+-.++++.
T Consensus       229 ~~~l~vGRL~~eK~~~~Li~a~------~~l~~~~~~~-~-l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~~~~~~~~~~  300 (462)
T PLN02846        229 KGAYYIGKMVWSKGYKELLKLL------HKHQKELSGL-E-VDLYGSGEDSDEVKAAAEKLELDVRVYPGRDHADPLFHD  300 (462)
T ss_pred             eEEEEEecCcccCCHHHHHHHH------HHHHhhCCCe-E-EEEECCCccHHHHHHHHHhcCCcEEEECCCCCHHHHHHh
Confidence            367888864    566676665      22322  233 4 455787754221 11001112223334333455789999


Q ss_pred             ccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE-EeChhhHHHHHHccCc
Q 042754           86 ASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLY-CAHPQSLHQVIAGMDL  151 (178)
Q Consensus        86 adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~-~~~~~~L~~~i~~l~~  151 (178)
                      +|++|.-    +=..++.||+++|+|+|..-.+.        + ..+.+.+.++ ..+.+.+.+++.+++.
T Consensus       301 ~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~--------~-~~v~~~~ng~~~~~~~~~a~ai~~~l~  362 (462)
T PLN02846        301 YKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS--------N-EFFKQFPNCRTYDDGKGFVRATLKALA  362 (462)
T ss_pred             CCEEEECCCcccchHHHHHHHHcCCcEEEecCCC--------c-ceeecCCceEecCCHHHHHHHHHHHHc
Confidence            9999986    34578999999999999854431        1 3344433343 3477888888887753

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=96.61  E-value=0.012  Score=50.69  Aligned_cols=123  Identities=18%  Similarity=0.138  Sum_probs=68.6

Q ss_pred             cEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcc-ccc--ccccCCcceEEEEeCh-hh-HHHH
Q 042754           12 RIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYV-PTK--SLGEDGLMAVDYFTFS-SS-IADH   82 (178)
Q Consensus        12 ~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~-~~~--~~~~~~~~nv~v~~~~-~~-~~~~   82 (178)
                      ..++++.|..    |.+.+++++      ..+.+.++ +++ +.|..... ...  ......+.++.+.... ++ +..+
T Consensus       291 ~~~i~~vGrl~~~Kg~~~li~a~------~~l~~~~~-~lv-i~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~  362 (473)
T TIGR02095       291 VPLFGVISRLTQQKGVDLLLAAL------PELLELGG-QLV-VLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLI  362 (473)
T ss_pred             CCEEEEEecCccccChHHHHHHH------HHHHHcCc-EEE-EECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHH
Confidence            4466677754    455555554      33444454 655 45655311 111  0001123456555433 33 6689


Q ss_pred             hhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhC------CCEEE---eChhhHHHHHHcc
Q 042754           83 LRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR------KHLYC---AHPQSLHQVIAGM  149 (178)
Q Consensus        83 ~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~------G~~~~---~~~~~L~~~i~~l  149 (178)
                      ++.||+++.-+    -+.+.+||+++|+|.|+-....        ..+.+.+.      +.|+.   .+++.|.++|.++
T Consensus       363 ~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg--------~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~  434 (473)
T TIGR02095       363 YAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG--------LADTVVDGDPEAESGTGFLFEEYDPGALLAALSRA  434 (473)
T ss_pred             HHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCC--------ccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHH
Confidence            99999999642    2368999999999999643321        11122222      44543   3788888888776


Q ss_pred             C
Q 042754          150 D  150 (178)
Q Consensus       150 ~  150 (178)
                      .
T Consensus       435 l  435 (473)
T TIGR02095       435 L  435 (473)
T ss_pred             H
Confidence            3

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>PRK00654 glgA glycogen synthase; Provisional

Probab=96.58  E-value=0.023  Score=48.94  Aligned_cols=128  Identities=16%  Similarity=0.151  Sum_probs=69.2

Q ss_pred             cEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcc--c-ccccccCCcceEEE-EeChhh-HHHH
Q 042754           12 RIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYV--P-TKSLGEDGLMAVDY-FTFSSS-IADH   82 (178)
Q Consensus        12 ~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~--~-~~~~~~~~~~nv~v-~~~~~~-~~~~   82 (178)
                      ..++++.|..    |...+++++      ..+...++ +++++ |.....  . ........+.++.+ .+|..+ +..+
T Consensus       282 ~~~i~~vGRl~~~KG~~~li~a~------~~l~~~~~-~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~  353 (466)
T PRK00654        282 APLFAMVSRLTEQKGLDLVLEAL------PELLEQGG-QLVLL-GTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRI  353 (466)
T ss_pred             CcEEEEeeccccccChHHHHHHH------HHHHhcCC-EEEEE-ecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHH
Confidence            4467777864    555666655      23333455 66554 654311  1 11000112334543 466544 5688


Q ss_pred             hhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE---eChhhHHHHHHcc
Q 042754           83 LRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC---AHPQSLHQVIAGM  149 (178)
Q Consensus        83 ~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~---~~~~~L~~~i~~l  149 (178)
                      ++.||++|.-+    -+.+.+||+++|+|.|+-.....  .+...+.....+.+.|+.   .+++.|.++|.++
T Consensus       354 ~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~--~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~  425 (466)
T PRK00654        354 YAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGL--ADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRA  425 (466)
T ss_pred             HhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCc--cceeecCCCCCCCCceEEeCCCCHHHHHHHHHHH
Confidence            99999999742    23699999999999997433211  111111000012244543   3778888888765

>PHA01630 putative group 1 glycosyl transferase

Probab=96.54  E-value=0.038  Score=45.60  Aligned_cols=37  Identities=16%  Similarity=0.205  Sum_probs=30.5

Q ss_pred             hhHHHHhhhccEEEe--c--CChHHHHHHHHcCCCEEEEeC
Q 042754           77 SSIADHLRSASLVIS--H--AGSGSIFETLRHGKPLIVVVN  113 (178)
Q Consensus        77 ~~~~~~~~~adlvIs--h--aG~~Ti~E~l~~g~P~iviP~  113 (178)
                      +++..+|+.||++|.  +  +-+.++.||+++|+|.|+...
T Consensus       201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~  241 (331)
T PHA01630        201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEK  241 (331)
T ss_pred             HHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCC
Confidence            579999999999984  2  226799999999999998653

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.39  E-value=0.012  Score=50.28  Aligned_cols=130  Identities=18%  Similarity=0.139  Sum_probs=69.2

Q ss_pred             CcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcc-ccc--ccccCCcceEEEE-eChhh-HHH
Q 042754           11 KRIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYV-PTK--SLGEDGLMAVDYF-TFSSS-IAD   81 (178)
Q Consensus        11 ~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~-~~~--~~~~~~~~nv~v~-~~~~~-~~~   81 (178)
                      ...++++.|..    |...+.+++      ..+.+.+. ++++ .|..... ...  ........++.++ +|..+ +..
T Consensus       295 ~~~~i~~vGrl~~~Kg~~~li~a~------~~l~~~~~-~lvi-~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  366 (476)
T cd03791         295 DAPLFGFVGRLTEQKGIDLLLEAL------PELLELGG-QLVI-LGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHL  366 (476)
T ss_pred             CCCEEEEEeeccccccHHHHHHHH------HHHHHcCc-EEEE-EecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHH
Confidence            34466777754    455555554      33444444 5544 4554321 110  0001113466544 45433 567


Q ss_pred             HhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE---eChhhHHHHHHccC
Q 042754           82 HLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC---AHPQSLHQVIAGMD  150 (178)
Q Consensus        82 ~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~---~~~~~L~~~i~~l~  150 (178)
                      +++.||+++.-    +-+.+.+|++++|+|.|+-.....  .+...+...-.+.|.|+.   .+++.|.+++.++.
T Consensus       367 ~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~--~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l  440 (476)
T cd03791         367 IYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGL--ADTVIDYNEDTGEGTGFVFEGYNADALLAALRRAL  440 (476)
T ss_pred             HHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCc--cceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHH
Confidence            89999999964    233689999999999986443321  111111100012334554   36788888887763

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]

Probab=96.16  E-value=0.39  Score=38.59  Aligned_cols=128  Identities=23%  Similarity=0.259  Sum_probs=68.1

Q ss_pred             HHHHhCCCCeEEEEEeCCCcccccccc-cC-CcceEEEE-----eChhhHHHHhhhccEEEecCCh-HHHHHHHHcCCCE
Q 042754           37 QELTRRGYTHLLIQMGRGTYVPTKSLG-ED-GLMAVDYF-----TFSSSIADHLRSASLVISHAGS-GSIFETLRHGKPL  108 (178)
Q Consensus        37 ~~l~~~~~~~vvv~~G~~~~~~~~~~~-~~-~~~nv~v~-----~~~~~~~~~~~~adlvIshaG~-~Ti~E~l~~g~P~  108 (178)
                      +.+...+. .+++.......+..+... .. ......+.     ++-| ..++|++||.+|+-+-. +-++||++.|+|+
T Consensus       191 k~l~~~g~-~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NP-Y~~~La~Adyii~TaDSinM~sEAasTgkPv  268 (329)
T COG3660         191 KILENQGG-SFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNP-YIDMLAAADYIISTADSINMCSEAASTGKPV  268 (329)
T ss_pred             HHHHhCCc-eEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCc-hHHHHhhcceEEEecchhhhhHHHhccCCCe
Confidence            34444564 888888876643322100 00 01111111     3333 56889999999887764 4578999999999


Q ss_pred             EEEeCCCC-CCchHHHHHHHHHhCCCEEEeChhhHHHHHHccCcccCCCCCCCChh-HHHHHHHHhcCC
Q 042754          109 IVVVNEDL-MDNHQSELAEELAARKHLYCAHPQSLHQVIAGMDLESLLPYQPGDAT-PVAKLINRFLGF  175 (178)
Q Consensus       109 iviP~~~~-~~~~Q~~nA~~l~~~G~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~~-~i~~~i~~~~~~  175 (178)
                      -+.--+.. ...+ ...-+.|.+.+++...+.+.+.  ++      --.|.+-+.+ ++++.|...+|.
T Consensus       269 ~~~~~~~~~s~K~-r~Fi~~L~eq~~AR~f~~~~~~--~e------~ysy~PLnEt~RiA~~Ira~l~~  328 (329)
T COG3660         269 FILEPPNFNSLKF-RIFIEQLVEQKIARPFEGSNLA--LE------EYSYKPLNETERIAEEIRAELGR  328 (329)
T ss_pred             EEEecCCcchHHH-HHHHHHHHHhhhccccCcchhh--hc------ccccCCchHHHHHHHHHHHHhCC
Confidence            87633211 1111 2234445555554332222110  11      1123333445 999999888875

>PRK14098 glycogen synthase; Provisional

Probab=96.10  E-value=0.034  Score=48.30  Aligned_cols=126  Identities=10%  Similarity=0.084  Sum_probs=70.6

Q ss_pred             cEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcc--c-ccccccCCcceEEEEeChhh--HHHH
Q 042754           12 RIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYV--P-TKSLGEDGLMAVDYFTFSSS--IADH   82 (178)
Q Consensus        12 ~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~--~-~~~~~~~~~~nv~v~~~~~~--~~~~   82 (178)
                      ..++++.|..    |.+.+.+++      ..+.+.++ +++ +.|.....  . ........+.++.+.++.++  +..+
T Consensus       307 ~~~i~~vgRl~~~KG~d~li~a~------~~l~~~~~-~lv-ivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~  378 (489)
T PRK14098        307 TPLVGVIINFDDFQGAELLAESL------EKLVELDI-QLV-ICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLA  378 (489)
T ss_pred             CCEEEEeccccccCcHHHHHHHH------HHHHhcCc-EEE-EEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHH
Confidence            3466777754    566666665      23333454 554 45654321  1 11100112457877776644  6789


Q ss_pred             hhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE---eChhhHHHHHHcc
Q 042754           83 LRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC---AHPQSLHQVIAGM  149 (178)
Q Consensus        83 ~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~---~~~~~L~~~i~~l  149 (178)
                      ++.||+++.-+    =+.+.+|++++|+|.|+.......+  ...  ....+.+-|+.   .+++.|.++|.++
T Consensus       379 ~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d--~v~--~~~~~~~~G~l~~~~d~~~la~ai~~~  448 (489)
T PRK14098        379 IAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVE--TIE--EVSEDKGSGFIFHDYTPEALVAKLGEA  448 (489)
T ss_pred             HHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCce--eee--cCCCCCCceeEeCCCCHHHHHHHHHHH
Confidence            99999999643    1368999999999988754322111  110  00011233433   3788888888764

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=95.93  E-value=0.06  Score=47.84  Aligned_cols=114  Identities=16%  Similarity=0.084  Sum_probs=65.9

Q ss_pred             CCCCcEEEEEeCCccH--HHHHHHhccHHHHH--HHHhCCCCeEEEEEeCCCcccc-cccccCCc-ceEEEEeChhhHHH
Q 042754            8 VSLKRIVFVTVGTTCF--DALVKAVDTLEVKQ--ELTRRGYTHLLIQMGRGTYVPT-KSLGEDGL-MAVDYFTFSSSIAD   81 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~--~l~~~~~~~vvv~~G~~~~~~~-~~~~~~~~-~nv~v~~~~~~~~~   81 (178)
                      +++++.|.+.-||-..  +.+...+  .++.+  .+. .+. ++++..-+...... .......+ ..+++..-- +-.+
T Consensus       410 ~~~~~iIaLLPGSR~~EI~rllPv~--l~aa~~~~l~-~~l-~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii~~~-~~~~  484 (608)
T PRK01021        410 PSDKPIVAAFPGSRRGDILRNLTIQ--VQAFLASSLA-STH-QLLVSSANPKYDHLILEVLQQEGCLHSHIVPSQ-FRYE  484 (608)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHH--HHHHHHHHhc-cCe-EEEEecCchhhHHHHHHHHhhcCCCCeEEecCc-chHH
Confidence            3467899999999743  3444444  12222  222 233 66554333221111 10000111 123333211 1268


Q ss_pred             HhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh
Q 042754           82 HLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA  130 (178)
Q Consensus        82 ~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~  130 (178)
                      +|++||+++..+| +.+.|+..+|+|+|++-...   .=-...|+++.+
T Consensus       485 ~m~aaD~aLaaSG-TaTLEaAL~g~PmVV~YK~s---~Lty~Iak~Lvk  529 (608)
T PRK01021        485 LMRECDCALAKCG-TIVLETALNQTPTIVTCQLR---PFDTFLAKYIFK  529 (608)
T ss_pred             HHHhcCeeeecCC-HHHHHHHHhCCCEEEEEecC---HHHHHHHHHHHh
Confidence            9999999999999 67899999999999976542   234567888887

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria

Probab=95.88  E-value=0.0091  Score=49.61  Aligned_cols=100  Identities=17%  Similarity=0.243  Sum_probs=59.3

Q ss_pred             cceEEEEeChhhHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHH----HHHhCCCE-EEeChhh
Q 042754           67 LMAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAE----ELAARKHL-YCAHPQS  141 (178)
Q Consensus        67 ~~nv~v~~~~~~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~----~l~~~G~~-~~~~~~~  141 (178)
                      ..++.....-+++.++|..||++||--. +.+.|.+.+++|+|+.....    ++....+    -+.+...| ++.+.++
T Consensus       251 ~~~i~~~~~~~~~~~ll~~aDiLITDyS-Si~fD~~~l~KPiify~~D~----~~Y~~~rg~~~~~~~~~pg~~~~~~~e  325 (369)
T PF04464_consen  251 NSNIIFVSDNEDIYDLLAAADILITDYS-SIIFDFLLLNKPIIFYQPDL----EEYEKERGFYFDYEEDLPGPIVYNFEE  325 (369)
T ss_dssp             TTTEEE-TT-S-HHHHHHT-SEEEESS--THHHHHGGGT--EEEE-TTT----TTTTTTSSBSS-TTTSSSS-EESSHHH
T ss_pred             CCcEEECCCCCCHHHHHHhcCEEEEech-hHHHHHHHhCCCEEEEeccH----HHHhhccCCCCchHhhCCCceeCCHHH
Confidence            3566665555578999999999999876 78999999999999876532    1221100    12222333 3458899


Q ss_pred             HHHHHHccC-------------cccCCCCCCCChh-HHHHHHHH
Q 042754          142 LHQVIAGMD-------------LESLLPYQPGDAT-PVAKLINR  171 (178)
Q Consensus       142 L~~~i~~l~-------------~~~~~~~~~~~~~-~i~~~i~~  171 (178)
                      |.++|++..             ...+-.+.++++. +|++.|.+
T Consensus       326 L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I~k  369 (369)
T PF04464_consen  326 LIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYIFK  369 (369)
T ss_dssp             HHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHHHH
T ss_pred             HHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHhC
Confidence            999998853             1233456777777 99988864

They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=95.86  E-value=0.2  Score=42.49  Aligned_cols=78  Identities=15%  Similarity=0.062  Sum_probs=62.6

Q ss_pred             ceEEEEeChhhHHHHhhhccEEEe------cCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-Chh
Q 042754           68 MAVDYFTFSSSIADHLRSASLVIS------HAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-HPQ  140 (178)
Q Consensus        68 ~nv~v~~~~~~~~~~~~~adlvIs------haG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-~~~  140 (178)
                      .+|.+.+-.-.|..++..||+++-      +||.| ..|.+++|+|.|.=|+.+    .|.+.++.+.+.|+++.+ +.+
T Consensus       300 tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~----Nf~ei~~~l~~~ga~~~v~~~~  374 (419)
T COG1519         300 TDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTF----NFSDIAERLLQAGAGLQVEDAD  374 (419)
T ss_pred             CcEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccc----cHHHHHHHHHhcCCeEEECCHH
Confidence            467788877789999999999854      66654 899999999999888763    499999999999999876 445


Q ss_pred             hHHHHHHccC
Q 042754          141 SLHQVIAGMD  150 (178)
Q Consensus       141 ~L~~~i~~l~  150 (178)
                      .|.+++..++
T Consensus       375 ~l~~~v~~l~  384 (419)
T COG1519         375 LLAKAVELLL  384 (419)
T ss_pred             HHHHHHHHhc
Confidence            5666666654

>PLN02501 digalactosyldiacylglycerol synthase

Probab=95.70  E-value=0.2  Score=45.55  Aligned_cols=120  Identities=11%  Similarity=0.132  Sum_probs=71.1

Q ss_pred             EEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccccc-ccCCcceEEEEeChhhHHHHhhhcc
Q 042754           15 FVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTKSL-GEDGLMAVDYFTFSSSIADHLRSAS   87 (178)
Q Consensus        15 lVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~~~-~~~~~~nv~v~~~~~~~~~~~~~ad   87 (178)
                      +++.|-.    |...|++++      ..+..  .++ + +++.|.+........ ......++...++.++...+|+.+|
T Consensus       549 iLfVGRLa~EKGld~LLeAl------a~L~~~~pnv-r-LvIVGDGP~reeLe~la~eLgL~V~FLG~~dd~~~lyasaD  620 (794)
T PLN02501        549 AYFLGKMVWAKGYRELIDLL------AKHKNELDGF-N-LDVFGNGEDAHEVQRAAKRLDLNLNFLKGRDHADDSLHGYK  620 (794)
T ss_pred             eEEEEcccccCCHHHHHHHH------HHHHhhCCCe-E-EEEEcCCccHHHHHHHHHHcCCEEEecCCCCCHHHHHHhCC
Confidence            4456643    566676665      12222  233 4 455676643211100 0112235777788877778999999


Q ss_pred             EEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCE-EEeChhhHHHHHHccCc
Q 042754           88 LVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHL-YCAHPQSLHQVIAGMDL  151 (178)
Q Consensus        88 lvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~-~~~~~~~L~~~i~~l~~  151 (178)
                      ++|.-+    =..++.||+++|+|+|....+.    .+.     +.+-+.+ ...+++.+.++|.+++.
T Consensus       621 VFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG----~e~-----V~~g~nGll~~D~EafAeAI~~LLs  680 (794)
T PLN02501        621 VFINPSISDVLCTATAEALAMGKFVVCADHPS----NEF-----FRSFPNCLTYKTSEDFVAKVKEALA  680 (794)
T ss_pred             EEEECCCcccchHHHHHHHHcCCCEEEecCCC----Cce-----EeecCCeEecCCHHHHHHHHHHHHh
Confidence            998732    2478999999999999865442    111     2222222 23578899999888754

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=95.62  E-value=0.077  Score=45.09  Aligned_cols=78  Identities=9%  Similarity=0.081  Sum_probs=53.1

Q ss_pred             cceEEEEeCh--hhHHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHH---hCCCEE-E
Q 042754           67 LMAVDYFTFS--SSIADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA---ARKHLY-C  136 (178)
Q Consensus        67 ~~nv~v~~~~--~~~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~---~~G~~~-~  136 (178)
                      ..+|+..+++  +++..+|+.||++|+-.    =+.++.|++++|+|.|+.-...    .-   ...+.   +...|+ .
T Consensus       304 ~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~gg----p~---~~iv~~~~~g~~G~l~  376 (419)
T cd03806         304 EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGG----PL---LDIVVPWDGGPTGFLA  376 (419)
T ss_pred             CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCC----Cc---hheeeccCCCCceEEe
Confidence            4578888886  46889999999988532    2368999999999999743221    11   11121   222343 3


Q ss_pred             eChhhHHHHHHccCc
Q 042754          137 AHPQSLHQVIAGMDL  151 (178)
Q Consensus       137 ~~~~~L~~~i~~l~~  151 (178)
                      .+++++.++|.++..
T Consensus       377 ~d~~~la~ai~~ll~  391 (419)
T cd03806         377 STAEEYAEAIEKILS  391 (419)
T ss_pred             CCHHHHHHHHHHHHh
Confidence            489999999998863

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=95.53  E-value=0.21  Score=47.13  Aligned_cols=76  Identities=18%  Similarity=0.200  Sum_probs=51.2

Q ss_pred             cceEEEEeCh--hhHHHHhhhc----cEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 042754           67 LMAVDYFTFS--SSIADHLRSA----SLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC  136 (178)
Q Consensus        67 ~~nv~v~~~~--~~~~~~~~~a----dlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~  136 (178)
                      ..+|.+.+|.  +++..+|+.|    |++|.-+    =+.++.||+++|+|+|.-...    +    ..+.+....-|+.
T Consensus       547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvG----G----~~EII~~g~nGlL  618 (1050)
T TIGR02468       547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNG----G----PVDIHRVLDNGLL  618 (1050)
T ss_pred             CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCC----C----cHHHhccCCcEEE
Confidence            3567777775  4688999888    5888753    237999999999999975432    1    1122222223333


Q ss_pred             ---eChhhHHHHHHccC
Q 042754          137 ---AHPQSLHQVIAGMD  150 (178)
Q Consensus       137 ---~~~~~L~~~i~~l~  150 (178)
                         .+++.|.++|.+++
T Consensus       619 VdP~D~eaLA~AL~~LL  635 (1050)
T TIGR02468       619 VDPHDQQAIADALLKLV  635 (1050)
T ss_pred             ECCCCHHHHHHHHHHHh
Confidence               37788999988875

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=95.44  E-value=0.074  Score=43.66  Aligned_cols=113  Identities=12%  Similarity=0.155  Sum_probs=69.8

Q ss_pred             cEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhh--HHHHhhhccEE
Q 042754           12 RIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSS--IADHLRSASLV   89 (178)
Q Consensus        12 ~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~--~~~~~~~adlv   89 (178)
                      +..++..|+.+...   .+      .. ...++ ++ +++|.+.... .     ...||...+|++.  +..+|+..-.+
T Consensus       169 ~~~i~yaG~l~k~~---~l------~~-~~~~~-~l-~i~G~g~~~~-~-----~~~~V~f~G~~~~eel~~~l~~~~gL  230 (333)
T PRK09814        169 QKKINFAGNLEKSP---FL------KN-WSQGI-KL-TVFGPNPEDL-E-----NSANISYKGWFDPEELPNELSKGFGL  230 (333)
T ss_pred             CceEEEecChhhch---HH------Hh-cCCCC-eE-EEECCCcccc-c-----cCCCeEEecCCCHHHHHHHHhcCcCe
Confidence            44677888775211   12      11 12233 44 5677664322 1     2358999999853  66677763223


Q ss_pred             EecC--------------ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-ChhhHHHHHHccC
Q 042754           90 ISHA--------------GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-HPQSLHQVIAGMD  150 (178)
Q Consensus        90 Isha--------------G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-~~~~L~~~i~~l~  150 (178)
                      |.-.              =.+-+.+.+++|+|+|+-+        +...++.+++.+.|+.. +.+++.+.+.++.
T Consensus       231 v~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~--------~~~~~~~V~~~~~G~~v~~~~el~~~l~~~~  298 (333)
T PRK09814        231 VWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS--------KAAIADFIVENGLGFVVDSLEELPEIIDNIT  298 (333)
T ss_pred             EEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC--------CccHHHHHHhCCceEEeCCHHHHHHHHHhcC
Confidence            3221              1234788999999999732        23578899999999875 5678888888764

>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases

Probab=95.41  E-value=0.038  Score=37.48  Aligned_cols=57  Identities=14%  Similarity=0.043  Sum_probs=35.2

Q ss_pred             CCCCcEEEEEeCCccHH----HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEE
Q 042754            8 VSLKRIVFVTVGTTCFD----ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD   71 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~~~----~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~   71 (178)
                      ++++|+|+||+|+....    .-...+  ..+++++.+.+. ++|+..+........    ..+.|++
T Consensus        37 ~~~RpRVcvT~G~~~~~~~g~~~~~~l--~~ll~ala~ldv-EvV~a~~~~~~~~lg----~lP~nVR   97 (97)
T PF06722_consen   37 PPGRPRVCVTLGTSVRMFFGPGGVPLL--RRLLEALAGLDV-EVVVALPAAQRAELG----ELPDNVR   97 (97)
T ss_dssp             STSSEEEEEEETHHHCHHHSCHHHCHH--HHHHHHHHTSSS-EEEEEETTCCCGGCC----S-TTTEE
T ss_pred             CCCCCEEEEEcCCCccccccccchHHH--HHHHHHHhhCCc-EEEEECCHHHHHhhC----CCCCCCC
Confidence            46789999999975211    111122  233678888897 999999876543322    2456653

Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.

>PRK10125 putative glycosyl transferase; Provisional

Probab=95.16  E-value=0.27  Score=41.63  Aligned_cols=46  Identities=17%  Similarity=0.223  Sum_probs=35.4

Q ss_pred             eEEEEeCh---hhHHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCC
Q 042754           69 AVDYFTFS---SSIADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNE  114 (178)
Q Consensus        69 nv~v~~~~---~~~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~  114 (178)
                      ++...+|.   .++.++|+.||++|.-+    -..++.||+++|+|+|.-...
T Consensus       287 ~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~g  339 (405)
T PRK10125        287 NVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSD  339 (405)
T ss_pred             ceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCC
Confidence            46666665   34788999999998743    346899999999999986543

>PRK10017 colanic acid biosynthesis protein; Provisional

Probab=94.92  E-value=1.2  Score=38.22  Aligned_cols=130  Identities=15%  Similarity=0.133  Sum_probs=76.8

Q ss_pred             CCcEEEEEeCCcc-H--------HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCC------cccc--cc--cccCCcceE
Q 042754           10 LKRIVFVTVGTTC-F--------DALVKAVDTLEVKQELTRRGYTHLLIQMGRGT------YVPT--KS--LGEDGLMAV   70 (178)
Q Consensus        10 ~~~~ilVt~Gs~~-~--------~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~------~~~~--~~--~~~~~~~nv   70 (178)
                      ++++|.+++-... +        ....+.+  .++++.+.+.++ +++++.....      .+..  ..  ..-..+.++
T Consensus       233 ~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~l--a~~i~~Li~~g~-~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~  309 (426)
T PRK10017        233 QQKTVAITLRELAPFDKRLGTTQQAYEKAF--AGVVNRIIDEGY-QVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARY  309 (426)
T ss_pred             cCCEEEEEecccccccccccccHHHHHHHH--HHHHHHHHHCCC-eEEEEecccCccCCCCchHHHHHHHHHhcccccce
Confidence            4678888876442 1        2233333  334566666676 7766654211      1111  00  000112233


Q ss_pred             EEE-e-Ch-hhHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCE-EE-----eChhh
Q 042754           71 DYF-T-FS-SSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHL-YC-----AHPQS  141 (178)
Q Consensus        71 ~v~-~-~~-~~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~-~~-----~~~~~  141 (178)
                      ++. + |. .++..++..||++|+. =.-++.=++..|+|.|.+++.       .....++.+.|+. ++     .+.++
T Consensus       310 ~vi~~~~~~~e~~~iIs~~dl~ig~-RlHa~I~a~~~gvP~i~i~Y~-------~K~~~~~~~lg~~~~~~~~~~l~~~~  381 (426)
T PRK10017        310 HVVMDELNDLEMGKILGACELTVGT-RLHSAIISMNFGTPAIAINYE-------HKSAGIMQQLGLPEMAIDIRHLLDGS  381 (426)
T ss_pred             eEecCCCChHHHHHHHhhCCEEEEe-cchHHHHHHHcCCCEEEeeeh-------HHHHHHHHHcCCccEEechhhCCHHH
Confidence            332 2 32 3466899999999995 455677789999999999873       4667778888876 32     25667


Q ss_pred             HHHHHHccC
Q 042754          142 LHQVIAGMD  150 (178)
Q Consensus       142 L~~~i~~l~  150 (178)
                      |.+.+.++.
T Consensus       382 Li~~v~~~~  390 (426)
T PRK10017        382 LQAMVADTL  390 (426)
T ss_pred             HHHHHHHHH
Confidence            777777764

>PLN02949 transferase, transferring glycosyl groups

Probab=94.78  E-value=0.22  Score=43.09  Aligned_cols=81  Identities=11%  Similarity=-0.040  Sum_probs=51.7

Q ss_pred             cceEEEEeCh--hhHHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChh
Q 042754           67 LMAVDYFTFS--SSIADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQ  140 (178)
Q Consensus        67 ~~nv~v~~~~--~~~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~~~~  140 (178)
                      ..+|...+++  +++..+|+.||++|.-.    =+.++.|++++|+|.|......... +...... -...|+. +.+++
T Consensus       334 ~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~-eIV~~~~-~g~tG~l-~~~~~  410 (463)
T PLN02949        334 DGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM-DIVLDED-GQQTGFL-ATTVE  410 (463)
T ss_pred             CCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc-eeeecCC-CCccccc-CCCHH
Confidence            4578888887  46889999999999522    1358999999999999865432100 0000000 0112322 24788


Q ss_pred             hHHHHHHccC
Q 042754          141 SLHQVIAGMD  150 (178)
Q Consensus       141 ~L~~~i~~l~  150 (178)
                      ++.++|.++.
T Consensus       411 ~la~ai~~ll  420 (463)
T PLN02949        411 EYADAILEVL  420 (463)
T ss_pred             HHHHHHHHHH
Confidence            8999888874

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=94.72  E-value=0.14  Score=40.73  Aligned_cols=100  Identities=16%  Similarity=0.214  Sum_probs=55.1

Q ss_pred             CcEEEEEeCCcc-HHHH-HHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCC-cceE-EEEeC--hhhHHHHhh
Q 042754           11 KRIVFVTVGTTC-FDAL-VKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDG-LMAV-DYFTF--SSSIADHLR   84 (178)
Q Consensus        11 ~~~ilVt~Gs~~-~~~l-~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~-~~nv-~v~~~--~~~~~~~~~   84 (178)
                      ++.|++..|+.+ .+.. .+..  .++++.+...++ ++++..|+.+........... ..++ .+.+.  ..++..+++
T Consensus       121 ~~~i~i~~~~~~~~k~w~~~~~--~~l~~~l~~~~~-~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~  197 (279)
T cd03789         121 KPVVVLPPGASGPAKRWPAERF--AALADRLLARGA-RVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALLA  197 (279)
T ss_pred             CCEEEECCCCCCccccCCHHHH--HHHHHHHHHCCC-EEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHH
Confidence            567888888642 1111 1111  122345555566 777766554321111000000 1121 12222  356889999


Q ss_pred             hccEEEecCChHHHHHHHHcCCCEEEEeCC
Q 042754           85 SASLVISHAGSGSIFETLRHGKPLIVVVNE  114 (178)
Q Consensus        85 ~adlvIshaG~~Ti~E~l~~g~P~iviP~~  114 (178)
                      .||++|+.-. |++.=|.++|+|+|.+-.+
T Consensus       198 ~~~l~I~~Ds-g~~HlA~a~~~p~i~l~g~  226 (279)
T cd03789         198 RADLVVTNDS-GPMHLAAALGTPTVALFGP  226 (279)
T ss_pred             hCCEEEeeCC-HHHHHHHHcCCCEEEEECC
Confidence            9999999744 5677778999999998543

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT

Probab=94.61  E-value=0.082  Score=42.08  Aligned_cols=45  Identities=24%  Similarity=0.296  Sum_probs=36.1

Q ss_pred             eEEEEeChhhHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCC
Q 042754           69 AVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNE  114 (178)
Q Consensus        69 nv~v~~~~~~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~  114 (178)
                      ++.+..-.-++.+++..||.|||-.+ ++-.||+.+|+|++++-.+
T Consensus       183 ~~~~~~~~~~~~~Ll~~s~~VvtinS-tvGlEAll~gkpVi~~G~~  227 (269)
T PF05159_consen  183 NVVIIDDDVNLYELLEQSDAVVTINS-TVGLEALLHGKPVIVFGRA  227 (269)
T ss_pred             CeEEECCCCCHHHHHHhCCEEEEECC-HHHHHHHHcCCceEEecCc
Confidence            44444333358899999999999877 7999999999999998654

Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A

Probab=94.10  E-value=0.46  Score=41.17  Aligned_cols=65  Identities=14%  Similarity=0.150  Sum_probs=38.9

Q ss_pred             cceEEEEeChh--hHHHHhhhccEEE---ecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCE
Q 042754           67 LMAVDYFTFSS--SIADHLRSASLVI---SHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHL  134 (178)
Q Consensus        67 ~~nv~v~~~~~--~~~~~~~~adlvI---shaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~  134 (178)
                      +.++.+.+..+  ++-..+..+|++.   ...|++|.+|+|++|+|+|..|-...   -...-|..|...|+.
T Consensus       341 ~~Ri~f~~~~~~~ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~---~sR~~aSiL~~lGl~  410 (468)
T PF13844_consen  341 PDRIIFSPVAPREEHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETM---ASRVGASILRALGLP  410 (468)
T ss_dssp             GGGEEEEE---HHHHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSG---GGSHHHHHHHHHT-G
T ss_pred             hhhEEEcCCCCHHHHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCc---hhHHHHHHHHHcCCc
Confidence            35677777654  2335567899996   34688999999999999999886543   245677788888886

>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.04  E-value=0.19  Score=41.20  Aligned_cols=101  Identities=16%  Similarity=0.110  Sum_probs=65.5

Q ss_pred             ceEEEEeChhhHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHH--HHHHHHHh-CCCEEEe--ChhhH
Q 042754           68 MAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQS--ELAEELAA-RKHLYCA--HPQSL  142 (178)
Q Consensus        68 ~nv~v~~~~~~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~--~nA~~l~~-~G~~~~~--~~~~L  142 (178)
                      .|..+.---.++.+++.++|++|..|| +.+-.+.-.|||.|-+|-..    -|+  ..|++=.+ .|+.+..  .+..-
T Consensus       294 dnc~l~lsqqsfadiLH~adaalgmAG-TAtEQavGLGkPvi~fPg~G----PQy~pgFA~rQ~rLLG~sltlv~~~aq~  368 (412)
T COG4370         294 DNCSLWLSQQSFADILHAADAALGMAG-TATEQAVGLGKPVIGFPGQG----PQYNPGFAERQQRLLGASLTLVRPEAQA  368 (412)
T ss_pred             CceEEEEeHHHHHHHHHHHHHHHHhcc-chHHHhhccCCceeecCCCC----CCcChHHHHHHHHHhcceeeecCCchhh
Confidence            355544333469999999999999999 45667888999999999653    344  34554444 4777643  22333


Q ss_pred             HHHHHc-cC---------c-ccCCCCCCCChh-HHHHHHHHhc
Q 042754          143 HQVIAG-MD---------L-ESLLPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       143 ~~~i~~-l~---------~-~~~~~~~~~~~~-~i~~~i~~~~  173 (178)
                      ...+.+ ++         + +..+....+.++ +|++.+.+..
T Consensus       369 a~~~~q~ll~dp~r~~air~nGqrRiGqaGaa~rIAe~l~e~a  411 (412)
T COG4370         369 AAQAVQELLGDPQRLTAIRHNGQRRIGQAGAARRIAEELGEMA  411 (412)
T ss_pred             HHHHHHHHhcChHHHHHHHhcchhhccCcchHHHHHHHHHHhc
Confidence            333332 32         1 334556666777 9999888764

>PRK14099 glycogen synthase; Provisional

Probab=93.93  E-value=0.35  Score=42.02  Aligned_cols=126  Identities=13%  Similarity=0.145  Sum_probs=66.2

Q ss_pred             EEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc--cc-ccccccCCcceE-EEEeChhhHHHHh-
Q 042754           13 IVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY--VP-TKSLGEDGLMAV-DYFTFSSSIADHL-   83 (178)
Q Consensus        13 ~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~--~~-~~~~~~~~~~nv-~v~~~~~~~~~~~-   83 (178)
                      .++.+.|..    |.+.+++++      ..+.+.++ +++ +.|....  .. ........+.++ ...+|.+++..++ 
T Consensus       296 ~li~~VgRL~~~KG~d~Li~A~------~~l~~~~~-~lv-ivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~  367 (485)
T PRK14099        296 LLLGVISRLSWQKGLDLLLEAL------PTLLGEGA-QLA-LLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQ  367 (485)
T ss_pred             cEEEEEecCCccccHHHHHHHH------HHHHhcCc-EEE-EEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHH
Confidence            355566753    555666655      23333354 554 4454431  11 110001122344 5678877888887 


Q ss_pred             hhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHH-H--hCCCEEE---eChhhHHHHHHc
Q 042754           84 RSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEEL-A--ARKHLYC---AHPQSLHQVIAG  148 (178)
Q Consensus        84 ~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l-~--~~G~~~~---~~~~~L~~~i~~  148 (178)
                      +.||+++.-    +=+.+.+||+++|+|.|+-.... . .+........ +  ..+.|+.   .+++.|.++|.+
T Consensus       368 a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GG-l-~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~  440 (485)
T PRK14099        368 AGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGG-L-ADTVVDANEMAIATGVATGVQFSPVTADALAAALRK  440 (485)
T ss_pred             hcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCC-c-cceeecccccccccCCCceEEeCCCCHHHHHHHHHH
Confidence            579999963    22478999999998777643221 1 1111111101 0  0123443   378889888875

>TIGR02470 sucr_synth sucrose synthase

Probab=93.91  E-value=1.4  Score=40.61  Aligned_cols=75  Identities=11%  Similarity=0.121  Sum_probs=47.6

Q ss_pred             cceEEEEeCh-h--hHHHHhh----hccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE
Q 042754           67 LMAVDYFTFS-S--SIADHLR----SASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLY  135 (178)
Q Consensus        67 ~~nv~v~~~~-~--~~~~~~~----~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~  135 (178)
                      ..+|.+.++. +  ++.+++.    .+|++|.-+    -+.|+.||+++|+|.|.-...    +    .++.+.+-.-|+
T Consensus       618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G----~~EiV~dg~tGf  689 (784)
T TIGR02470       618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----G----PLEIIQDGVSGF  689 (784)
T ss_pred             CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----C----HHHHhcCCCcEE
Confidence            3578877764 2  3445554    357887543    347999999999999973322    2    344454444455


Q ss_pred             Ee---ChhhHHHHHHcc
Q 042754          136 CA---HPQSLHQVIAGM  149 (178)
Q Consensus       136 ~~---~~~~L~~~i~~l  149 (178)
                      ..   +++.+.++|.++
T Consensus       690 LVdp~D~eaLA~aL~~l  706 (784)
T TIGR02470       690 HIDPYHGEEAAEKIVDF  706 (784)
T ss_pred             EeCCCCHHHHHHHHHHH
Confidence            43   678888888765

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=93.74  E-value=0.39  Score=38.12  Aligned_cols=47  Identities=19%  Similarity=0.289  Sum_probs=36.3

Q ss_pred             ceEEEE--eChhhHHHHh---hhccEEEecCChHH------HHHHHHcCCCEEEEeCC
Q 042754           68 MAVDYF--TFSSSIADHL---RSASLVISHAGSGS------IFETLRHGKPLIVVVNE  114 (178)
Q Consensus        68 ~nv~v~--~~~~~~~~~~---~~adlvIshaG~~T------i~E~l~~g~P~iviP~~  114 (178)
                      .++...  ||..+++..|   -.+|++||+-.+++      +.-|..+|+|.|+|-++
T Consensus       174 ~~Iia~~GPfs~~~n~all~q~~id~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp  231 (257)
T COG2099         174 ARIIAMRGPFSEEDNKALLEQYRIDVVVTKNSGGAGGTYEKIEAARELGIPVIMIERP  231 (257)
T ss_pred             hhEEEecCCcChHHHHHHHHHhCCCEEEEccCCcccCcHHHHHHHHHcCCcEEEEecC
Confidence            455555  7776665555   68999999977776      77789999999999776

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=93.63  E-value=1.9  Score=35.88  Aligned_cols=28  Identities=14%  Similarity=0.248  Sum_probs=24.5

Q ss_pred             hccEEEecCChHH---HHHHHHcCCCEEEEe
Q 042754           85 SASLVISHAGSGS---IFETLRHGKPLIVVV  112 (178)
Q Consensus        85 ~adlvIshaG~~T---i~E~l~~g~P~iviP  112 (178)
                      +-|+||++||+-+   +.-+...|+|.++.-
T Consensus        91 kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e  121 (352)
T PRK12446         91 KPDVIFSKGGFVSVPVVIGGWLNRVPVLLHE  121 (352)
T ss_pred             CCCEEEecCchhhHHHHHHHHHcCCCEEEEC
Confidence            4689999999996   899999999998753

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]

Probab=93.23  E-value=0.66  Score=38.10  Aligned_cols=63  Identities=21%  Similarity=0.189  Sum_probs=45.5

Q ss_pred             HHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChhhHHHHHHcc
Q 042754           81 DHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-AHPQSLHQVIAGM  149 (178)
Q Consensus        81 ~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~~~~~L~~~i~~l  149 (178)
                      .++-.|+++|+- |++--.||+.+|+|+|.+- +.    .-...-+++.+.|..+. .++.+..+...++
T Consensus       248 ~Llyya~lvig~-ggTMarEaAlLGtpaIs~~-pG----kll~vdk~lie~G~~~~s~~~~~~~~~a~~~  311 (346)
T COG1817         248 SLLYYATLVIGA-GGTMAREAALLGTPAISCY-PG----KLLAVDKYLIEKGLLYHSTDEIAIVEYAVRN  311 (346)
T ss_pred             HHHhhhheeecC-CchHHHHHHHhCCceEEec-CC----ccccccHHHHhcCceeecCCHHHHHHHHHHH
Confidence            688999999995 5477899999999999863 42    23345678899999886 4555544444443

>PLN00142 sucrose synthase

Probab=93.17  E-value=1.8  Score=40.06  Aligned_cols=73  Identities=12%  Similarity=0.126  Sum_probs=44.4

Q ss_pred             ceEEEEeCh------hhHHHHhh-hccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 042754           68 MAVDYFTFS------SSIADHLR-SASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC  136 (178)
Q Consensus        68 ~nv~v~~~~------~~~~~~~~-~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~  136 (178)
                      .+|.+.++.      +++..+++ .+|++|.-+    =+.|+.||+++|+|+|.-...    +    ..+.+.+-.-|+.
T Consensus       642 ~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvG----G----~~EIV~dG~tG~L  713 (815)
T PLN00142        642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQG----G----PAEIIVDGVSGFH  713 (815)
T ss_pred             CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCC----C----HHHHhcCCCcEEE
Confidence            456665542      23445555 478888642    236999999999999874322    2    3334444334544


Q ss_pred             e---ChhhHHHHHHc
Q 042754          137 A---HPQSLHQVIAG  148 (178)
Q Consensus       137 ~---~~~~L~~~i~~  148 (178)
                      +   +++.+.++|.+
T Consensus       714 V~P~D~eaLA~aI~~  728 (815)
T PLN00142        714 IDPYHGDEAANKIAD  728 (815)
T ss_pred             eCCCCHHHHHHHHHH
Confidence            3   67788887754

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=93.07  E-value=0.36  Score=39.31  Aligned_cols=77  Identities=18%  Similarity=0.145  Sum_probs=46.8

Q ss_pred             HHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeC--hhhHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeC
Q 042754           36 KQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTF--SSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVN  113 (178)
Q Consensus        36 ~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~--~~~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~  113 (178)
                      ++.+...++ ++++..|................++.+.+-  +.++..+++.||++|+-=. |.+.=|.+.|+|.|.+--
T Consensus       203 i~~l~~~~~-~ivl~~G~~~e~~~~~~i~~~~~~~~l~g~~sL~elaali~~a~l~I~nDS-Gp~HlA~A~g~p~valfG  280 (322)
T PRK10964        203 IGLLAPSGL-RIKLPWGAEHEEQRAKRLAEGFPYVEVLPKLSLEQVARVLAGAKAVVSVDT-GLSHLTAALDRPNITLYG  280 (322)
T ss_pred             HHHHHHCCC-eEEEeCCCHHHHHHHHHHHccCCcceecCCCCHHHHHHHHHhCCEEEecCC-cHHHHHHHhCCCEEEEEC
Confidence            345555565 777655653211110000001122333332  4578899999999999655 889999999999999844


Q ss_pred             C
Q 042754          114 E  114 (178)
Q Consensus       114 ~  114 (178)
                      +
T Consensus       281 p  281 (322)
T PRK10964        281 P  281 (322)
T ss_pred             C
Confidence            3

>PLN02939 transferase, transferring glycosyl groups

Probab=92.95  E-value=0.89  Score=42.71  Aligned_cols=127  Identities=9%  Similarity=0.037  Sum_probs=70.2

Q ss_pred             EEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccc----cc--ccccCCcceEEEEeChhh--HH
Q 042754           13 IVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVP----TK--SLGEDGLMAVDYFTFSSS--IA   80 (178)
Q Consensus        13 ~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~----~~--~~~~~~~~nv~v~~~~~~--~~   80 (178)
                      .++.+.|..    |...+.+++      ..+...++ ++ ++.|.+....    ..  ........+|.+..+.++  ..
T Consensus       780 pLIg~VGRL~~QKGiDlLleA~------~~Ll~~dv-qL-VIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah  851 (977)
T PLN02939        780 PLVGCITRLVPQKGVHLIRHAI------YKTAELGG-QF-VLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSH  851 (977)
T ss_pred             eEEEEeecCCcccChHHHHHHH------HHHhhcCC-EE-EEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHH
Confidence            467777754    566666655      22223354 55 4557553111    00  000112356887777665  35


Q ss_pred             HHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHH--HHHHH---hCCCEEE-eChhhHHHHHHcc
Q 042754           81 DHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSEL--AEELA---ARKHLYC-AHPQSLHQVIAGM  149 (178)
Q Consensus        81 ~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~n--A~~l~---~~G~~~~-~~~~~L~~~i~~l  149 (178)
                      .+|+.||++|.-+    -+.+.+||+++|+|.|+.......  +-..+  ...+.   ..|+.+. .+++.|.++|.++
T Consensus       852 ~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~--DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rA  928 (977)
T PLN02939        852 SIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLN--DSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERA  928 (977)
T ss_pred             HHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCc--ceeecCCccccccCCCceEEecCCCHHHHHHHHHHH
Confidence            7999999999642    247999999999999975443211  11111  11111   2343332 3777888777665

>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases

Probab=92.42  E-value=1.3  Score=33.46  Aligned_cols=52  Identities=13%  Similarity=0.119  Sum_probs=38.1

Q ss_pred             hccE-EEecCChHHHH----------------HHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 042754           85 SASL-VISHAGSGSIF----------------ETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC  136 (178)
Q Consensus        85 ~adl-vIshaG~~Ti~----------------E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~  136 (178)
                      ++|+ +|.-|-++|+.                .++..++|.+++|.......-+.+|.+.|.+.|+.+.
T Consensus        75 ~aD~~vIaPATantiAkiA~GiaD~Llt~~a~~~L~~~~pv~i~P~~m~~~~~~~~Nl~~L~~~G~~ii  143 (181)
T TIGR00421        75 PFDGMVVVPCSMKTLSAIANGYADNLITRAADVCLKERRKLVLVPRETPLNSIHLENMLRLSRMGAIIL  143 (181)
T ss_pred             hhCEEEEecCCHhHHHHHHcccCCCHHHHHHHHHHhcCCCEEEEeCCCcCCHHHHHHHHHHHHCCCEEE
Confidence            4664 47777777654                3578999999999764333445679999999998764

In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I

Probab=92.30  E-value=0.9  Score=36.82  Aligned_cols=100  Identities=14%  Similarity=0.114  Sum_probs=55.1

Q ss_pred             CCcEEEEEeCCc-cHHHH-HHHhccHHHHHHHHhCCCCeEEEEEeCCCccc-ccccccCCcceEEEEe--ChhhHHHHhh
Q 042754           10 LKRIVFVTVGTT-CFDAL-VKAVDTLEVKQELTRRGYTHLLIQMGRGTYVP-TKSLGEDGLMAVDYFT--FSSSIADHLR   84 (178)
Q Consensus        10 ~~~~ilVt~Gs~-~~~~l-~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~-~~~~~~~~~~nv~v~~--~~~~~~~~~~   84 (178)
                      ++|.|++..|+. ..+.. .+..  .++++.+.+.++ +++++.|...... ........ .+..+.+  -+.++..+++
T Consensus       178 ~~~~i~i~~gas~~~K~wp~e~~--~~l~~~l~~~~~-~~vl~~g~~~e~~~~~~i~~~~-~~~~l~g~~sL~el~ali~  253 (319)
T TIGR02193       178 PAPYAVLLHATSRDDKTWPEERW--RELARLLLARGL-QIVLPWGNDAEKQRAERIAEAL-PGAVVLPKMSLAEVAALLA  253 (319)
T ss_pred             CCCEEEEEeCCCcccCCCCHHHH--HHHHHHHHHCCC-eEEEeCCCHHHHHHHHHHHhhC-CCCeecCCCCHHHHHHHHH
Confidence            467777777753 22211 1111  112344544565 7777656432111 11000001 1112223  2456889999


Q ss_pred             hccEEEecCChHHHHHHHHcCCCEEEEeCC
Q 042754           85 SASLVISHAGSGSIFETLRHGKPLIVVVNE  114 (178)
Q Consensus        85 ~adlvIshaG~~Ti~E~l~~g~P~iviP~~  114 (178)
                      .||++||.=. |.+.=|.++|+|.|.+--+
T Consensus       254 ~a~l~I~~DS-gp~HlAaa~g~P~i~lfg~  282 (319)
T TIGR02193       254 GADAVVGVDT-GLTHLAAALDKPTVTLYGA  282 (319)
T ss_pred             cCCEEEeCCC-hHHHHHHHcCCCEEEEECC
Confidence            9999999654 7889999999999987433

This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=92.17  E-value=1.5  Score=33.25  Aligned_cols=70  Identities=24%  Similarity=0.356  Sum_probs=37.5

Q ss_pred             CcEEEEEeCCc-------------cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeCh-
Q 042754           11 KRIVFVTVGTT-------------CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS-   76 (178)
Q Consensus        11 ~~~ilVt~Gs~-------------~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~-   76 (178)
                      .+.||||.|..             ..+.+-..+     .+.+...|. +|.+++|+....+        |.++.+..+. 
T Consensus         3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~l-----A~~~~~~Ga-~V~li~g~~~~~~--------p~~~~~i~v~s   68 (185)
T PF04127_consen    3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAAL-----AEEAARRGA-EVTLIHGPSSLPP--------PPGVKVIRVES   68 (185)
T ss_dssp             T-EEEEEESB-EEESSSSEEEEES--SHHHHHH-----HHHHHHTT--EEEEEE-TTS------------TTEEEEE-SS
T ss_pred             CCEEEEECCCccccCCCceEecCCCcCHHHHHH-----HHHHHHCCC-EEEEEecCccccc--------cccceEEEecc
Confidence            46789999852             123444444     345556786 9999999964321        2234444432 


Q ss_pred             -hh----HHHHhhhccEEEecCC
Q 042754           77 -SS----IADHLRSASLVISHAG   94 (178)
Q Consensus        77 -~~----~~~~~~~adlvIshaG   94 (178)
                       .+    +.+.++.+|++|+-|-
T Consensus        69 a~em~~~~~~~~~~~Di~I~aAA   91 (185)
T PF04127_consen   69 AEEMLEAVKELLPSADIIIMAAA   91 (185)
T ss_dssp             HHHHHHHHHHHGGGGSEEEE-SB
T ss_pred             hhhhhhhhccccCcceeEEEecc
Confidence             33    4455578999998765

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN02316 synthase/transferase

Probab=92.08  E-value=1.8  Score=41.17  Aligned_cols=128  Identities=9%  Similarity=0.018  Sum_probs=68.4

Q ss_pred             EEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccc----c--cc--ccCCcceEEEEeChhh-H
Q 042754           13 IVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPT----K--SL--GEDGLMAVDYFTFSSS-I   79 (178)
Q Consensus        13 ~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~----~--~~--~~~~~~nv~v~~~~~~-~   79 (178)
                      .++.+.|-.    |...|.+++      ..+...+. ++++ .|.......    .  ..  ....+.++.+..+.++ +
T Consensus       841 plVg~VGRL~~qKGvdlLi~Al------~~ll~~~~-qlVI-vG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~l  912 (1036)
T PLN02316        841 PLVGIITRLTHQKGIHLIKHAI------WRTLERNG-QVVL-LGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPL  912 (1036)
T ss_pred             eEEEEEeccccccCHHHHHHHH------HHHhhcCc-EEEE-EeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHH
Confidence            466677754    555666655      22223354 6654 675522110    0  00  0012345665544444 3


Q ss_pred             -HHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHH-------HHHH--HHhCCCEEE-eChhhHHH
Q 042754           80 -ADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSE-------LAEE--LAARKHLYC-AHPQSLHQ  144 (178)
Q Consensus        80 -~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~-------nA~~--l~~~G~~~~-~~~~~L~~  144 (178)
                       +.+|+.||+++.-+    =+.+.+||+++|+|.|+-.....  .+...       +++.  ....|+.+. .+++.|..
T Consensus       913 ah~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL--~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~  990 (1036)
T PLN02316        913 SHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGL--FDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDY  990 (1036)
T ss_pred             HHHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCc--HhhccccccccccccccccCCceEEeCCCCHHHHHH
Confidence             37999999999542    24899999999999987433221  11111       1110  012233332 37888888


Q ss_pred             HHHccC
Q 042754          145 VIAGMD  150 (178)
Q Consensus       145 ~i~~l~  150 (178)
                      +|.+++
T Consensus       991 AL~raL  996 (1036)
T PLN02316        991 ALNRAI  996 (1036)
T ss_pred             HHHHHH
Confidence            887764

>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=91.94  E-value=0.18  Score=39.28  Aligned_cols=100  Identities=16%  Similarity=0.209  Sum_probs=51.9

Q ss_pred             CCCcEEEEEeCCcc-HHHH-HHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccc--cccCCc-ceEEEEeC--hhhHHH
Q 042754            9 SLKRIVFVTVGTTC-FDAL-VKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKS--LGEDGL-MAVDYFTF--SSSIAD   81 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~-~~~l-~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~--~~~~~~-~nv~v~~~--~~~~~~   81 (178)
                      .+++.|++..|+.. .+.. .+..  .++++.|.+.++ ++++..|+.+.+....  ...... ..+.+.+-  +.++..
T Consensus       103 ~~~~~i~i~~~a~~~~k~wp~e~~--~~l~~~l~~~~~-~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~a  179 (247)
T PF01075_consen  103 KDKPYIGINPGASWPSKRWPAEKW--AELIERLKERGY-RVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAA  179 (247)
T ss_dssp             TTSSEEEEE---SSGGGS--HHHH--HHHHHHHCCCT--EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHH
T ss_pred             ccCCeEEEeecCCCccccCCHHHH--HHHHHHHHhhCc-eEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHH
Confidence            45788888888642 2211 1122  222456655554 6766655554111110  000011 12333332  356789


Q ss_pred             HhhhccEEEecCChHHHHHHHHcCCCEEEEe
Q 042754           82 HLRSASLVISHAGSGSIFETLRHGKPLIVVV  112 (178)
Q Consensus        82 ~~~~adlvIshaG~~Ti~E~l~~g~P~iviP  112 (178)
                      ++..||++|+-=. |.+.=|.+.|+|+|.+-
T Consensus       180 li~~a~~~I~~Dt-g~~HlA~a~~~p~v~lf  209 (247)
T PF01075_consen  180 LISRADLVIGNDT-GPMHLAAALGTPTVALF  209 (247)
T ss_dssp             HHHTSSEEEEESS-HHHHHHHHTT--EEEEE
T ss_pred             HHhcCCEEEecCC-hHHHHHHHHhCCEEEEe
Confidence            9999999999755 88999999999999984

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]

Probab=91.61  E-value=5.4  Score=35.48  Aligned_cols=113  Identities=15%  Similarity=0.115  Sum_probs=66.6

Q ss_pred             CCCcEEEEEeCCc--cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc--------ccccCCcceEEEEeCh--
Q 042754            9 SLKRIVFVTVGTT--CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK--------SLGEDGLMAVDYFTFS--   76 (178)
Q Consensus         9 ~~~~~ilVt~Gs~--~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~--------~~~~~~~~nv~v~~~~--   76 (178)
                      ++.-+||++++..  --+++++..     ...|+.-+ ..+++.-|........        ..+ -...++++.+-.  
T Consensus       427 p~~avVf~c~~n~~K~~pev~~~w-----mqIL~~vP-~Svl~L~~~~~~~~~~~~l~~la~~~G-v~~eRL~f~p~~~~  499 (620)
T COG3914         427 PEDAVVFCCFNNYFKITPEVFALW-----MQILSAVP-NSVLLLKAGGDDAEINARLRDLAEREG-VDSERLRFLPPAPN  499 (620)
T ss_pred             CCCeEEEEecCCcccCCHHHHHHH-----HHHHHhCC-CcEEEEecCCCcHHHHHHHHHHHHHcC-CChhheeecCCCCC
Confidence            4456788887753  234566655     23444433 2566665553221111        011 112455555544  


Q ss_pred             hhHHHHhhhccEEEe---cCChHHHHHHHHcCCCEEEEeCCCCCCchHHH--H-HHHHHhCCCE
Q 042754           77 SSIADHLRSASLVIS---HAGSGSIFETLRHGKPLIVVVNEDLMDNHQSE--L-AEELAARKHL  134 (178)
Q Consensus        77 ~~~~~~~~~adlvIs---haG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~--n-A~~l~~~G~~  134 (178)
                      +++.+.+.-||+|.-   =+|++|.+|+|.+|+|+|..+      ++|+.  | +..+...|.-
T Consensus       500 ~~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~------G~~FasR~~~si~~~agi~  557 (620)
T COG3914         500 EDHRARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRV------GEQFASRNGASIATNAGIP  557 (620)
T ss_pred             HHHHHhhchhheeeecccCCCccchHHHHHhcCceeeec------cHHHHHhhhHHHHHhcCCc
Confidence            347788899999975   489999999999999999754      45663  2 3344445654

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1

Probab=91.59  E-value=0.37  Score=42.34  Aligned_cols=71  Identities=11%  Similarity=0.122  Sum_probs=53.1

Q ss_pred             ceEEEEeChh--hHHHHhhhccEEEecC---ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh--CCCEEEeChh
Q 042754           68 MAVDYFTFSS--SIADHLRSASLVISHA---GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA--RKHLYCAHPQ  140 (178)
Q Consensus        68 ~nv~v~~~~~--~~~~~~~~adlvIsha---G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~--~G~~~~~~~~  140 (178)
                      ..|.+.+|.+  ++...+..+.++|.-+   |.+|.+||+.+|+|+|  .+.         ....+..  .|+. +.+.+
T Consensus       409 ~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqI--nyg---------~~~~V~d~~NG~l-i~d~~  476 (519)
T TIGR03713       409 ERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQI--NKV---------ETDYVEHNKNGYI-IDDIS  476 (519)
T ss_pred             cEEEEEecCCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCee--ecC---------CceeeEcCCCcEE-eCCHH
Confidence            4788889988  8999999999999865   7779999999999999  221         0112222  3443 36888


Q ss_pred             hHHHHHHccC
Q 042754          141 SLHQVIAGMD  150 (178)
Q Consensus       141 ~L~~~i~~l~  150 (178)
                      +|.++|..++
T Consensus       477 ~l~~al~~~L  486 (519)
T TIGR03713       477 ELLKALDYYL  486 (519)
T ss_pred             HHHHHHHHHH
Confidence            8888887775

This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=91.12  E-value=2.3  Score=34.64  Aligned_cols=29  Identities=21%  Similarity=0.300  Sum_probs=26.0

Q ss_pred             hccEEEecCChHHHHHHHHcCCCEEEEeC
Q 042754           85 SASLVISHAGSGSIFETLRHGKPLIVVVN  113 (178)
Q Consensus        85 ~adlvIshaG~~Ti~E~l~~g~P~iviP~  113 (178)
                      +.|+||+.++..+.+-+-.+|+|.|.+-+
T Consensus        93 ~pDlVi~d~~~~~~~aA~~~~iP~i~i~~  121 (321)
T TIGR00661        93 NPDLIISDFEYSTVVAAKLLKIPVICISN  121 (321)
T ss_pred             CCCEEEECCchHHHHHHHhcCCCEEEEec
Confidence            45999999999999999999999997654

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II

Probab=90.85  E-value=1.9  Score=35.18  Aligned_cols=101  Identities=12%  Similarity=0.126  Sum_probs=55.5

Q ss_pred             CCcEEEEEeCCc-c-HHHH-HHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEE-EEe--ChhhHHHHh
Q 042754           10 LKRIVFVTVGTT-C-FDAL-VKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD-YFT--FSSSIADHL   83 (178)
Q Consensus        10 ~~~~ilVt~Gs~-~-~~~l-~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~-v~~--~~~~~~~~~   83 (178)
                      ++|.|.+-.|+. + .+.. .+..  .++++.+...++ ++++.-|+.+...........+.++. +.+  -+.++..++
T Consensus       173 ~~~~i~i~pga~~~~~K~Wp~e~~--~~li~~l~~~~~-~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali  249 (334)
T TIGR02195       173 ERPIIAFCPGAEFGPAKRWPHEHY--AELAKRLIDQGY-QVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLDEAVDLI  249 (334)
T ss_pred             CCCEEEEcCCCCCCccCCCCHHHH--HHHHHHHHHCCC-EEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHHHHHHHH
Confidence            467888877763 2 2211 1111  112344444465 76665444432111100000111111 222  235788999


Q ss_pred             hhccEEEecCChHHHHHHHHcCCCEEEEeCC
Q 042754           84 RSASLVISHAGSGSIFETLRHGKPLIVVVNE  114 (178)
Q Consensus        84 ~~adlvIshaG~~Ti~E~l~~g~P~iviP~~  114 (178)
                      +.||++|+-=. |.+.=|.+.|+|.|.+--+
T Consensus       250 ~~a~l~I~~DS-Gp~HlAaA~~~P~i~lfG~  279 (334)
T TIGR02195       250 ALAKAVVTNDS-GLMHVAAALNRPLVALYGS  279 (334)
T ss_pred             HhCCEEEeeCC-HHHHHHHHcCCCEEEEECC
Confidence            99999999755 7889999999999987433

This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=90.43  E-value=5.4  Score=32.27  Aligned_cols=32  Identities=25%  Similarity=0.163  Sum_probs=21.3

Q ss_pred             HHHHhhh--ccEEEecCChHHHH---HHHHcCCCEEE
Q 042754           79 IADHLRS--ASLVISHAGSGSIF---ETLRHGKPLIV  110 (178)
Q Consensus        79 ~~~~~~~--adlvIshaG~~Ti~---E~l~~g~P~iv  110 (178)
                      +..++..  -|+||+|.+...+.   -+...|+|.|.
T Consensus        82 l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~  118 (348)
T TIGR01133        82 ARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPLFH  118 (348)
T ss_pred             HHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCCEEE
Confidence            4444554  89999998765433   34557889975

RL J Bacteriol 1993 Mar;175(6):1841-3

>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2

Probab=90.41  E-value=6.2  Score=29.70  Aligned_cols=68  Identities=19%  Similarity=0.198  Sum_probs=41.7

Q ss_pred             HHHHhhhccEEEec-CChHHHHHHHH---------cCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE---------EeCh
Q 042754           79 IADHLRSASLVISH-AGSGSIFETLR---------HGKPLIVVVNEDLMDNHQSELAEELAARKHLY---------CAHP  139 (178)
Q Consensus        79 ~~~~~~~adlvIsh-aG~~Ti~E~l~---------~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~---------~~~~  139 (178)
                      ...++..||.+|.- ||.||+.|.+.         +.+|.+++-.... -++-...-+.+.+.|+.-         +-++
T Consensus        90 k~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~-~~~l~~~l~~~~~~gfi~~~~~~~~~~~d~~  168 (178)
T TIGR00730        90 KAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGH-FDGLVEWLKYSIQEGFISESHLKLIHVVSRP  168 (178)
T ss_pred             HHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcch-HHHHHHHHHHHHHCCCCCHHHcCcEEEcCCH
Confidence            44566889987654 66789888754         4899998742211 123333445677777642         2266


Q ss_pred             hhHHHHHH
Q 042754          140 QSLHQVIA  147 (178)
Q Consensus       140 ~~L~~~i~  147 (178)
                      +++.+.|+
T Consensus       169 ~e~~~~i~  176 (178)
T TIGR00730       169 DELIEQVQ  176 (178)
T ss_pred             HHHHHHHH
Confidence            66666664

This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=90.25  E-value=6  Score=32.03  Aligned_cols=93  Identities=16%  Similarity=0.183  Sum_probs=48.6

Q ss_pred             EEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeCh----------------
Q 042754           13 IVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS----------------   76 (178)
Q Consensus        13 ~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~----------------   76 (178)
                      +||+++|+.|.. +...+   .+.+.|.+.++ ++.++|+...........  ....+...++.                
T Consensus         1 ~~~~~~~~~gG~-~~~~~---~la~~l~~~G~-ev~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (350)
T cd03785           1 RILIAGGGTGGH-IFPAL---ALAEELRERGA-EVLFLGTKRGLEARLVPK--AGIPLHTIPVGGLRRKGSLKKLKAPFK   73 (350)
T ss_pred             CEEEEecCchhh-hhHHH---HHHHHHHhCCC-EEEEEECCCcchhhcccc--cCCceEEEEecCcCCCChHHHHHHHHH
Confidence            478888876532 22221   22456777786 888887764321111100  01122222211                


Q ss_pred             -----hhHHHHhhh--ccEEEecCChHH---HHHHHHcCCCEEEEe
Q 042754           77 -----SSIADHLRS--ASLVISHAGSGS---IFETLRHGKPLIVVV  112 (178)
Q Consensus        77 -----~~~~~~~~~--adlvIshaG~~T---i~E~l~~g~P~iviP  112 (178)
                           ..+..++..  -|+|++|.+..+   ..-+...|+|.++..
T Consensus        74 ~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~  119 (350)
T cd03785          74 LLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHE  119 (350)
T ss_pred             HHHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCCEEEEc
Confidence                 113344554  799999976433   334556799998754

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=90.19  E-value=0.52  Score=38.87  Aligned_cols=99  Identities=17%  Similarity=0.231  Sum_probs=55.4

Q ss_pred             CcEEEEEeC-CccH-HHH-HHHhccHHHHHHHHhCCCCeEEEEEeCCCcccc-cccccCCcceEEEEe--ChhhHHHHhh
Q 042754           11 KRIVFVTVG-TTCF-DAL-VKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPT-KSLGEDGLMAVDYFT--FSSSIADHLR   84 (178)
Q Consensus        11 ~~~ilVt~G-s~~~-~~l-~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~-~~~~~~~~~nv~v~~--~~~~~~~~~~   84 (178)
                      +|.|++.-| |.+. +.. .+..  .+.++.+...++ +|++..|+ ..... .......+..+.+.+  -+.++..+++
T Consensus       175 ~~~i~i~pg~s~~~~K~wp~e~~--~~l~~~l~~~~~-~Vvl~g~~-~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~  250 (334)
T COG0859         175 RPYIVINPGASRGSAKRWPLEHY--AELAELLIAKGY-QVVLFGGP-DEEERAEEIAKGLPNAVILAGKTSLEELAALIA  250 (334)
T ss_pred             CCeEEEeccccccccCCCCHHHH--HHHHHHHHHCCC-EEEEecCh-HHHHHHHHHHHhcCCccccCCCCCHHHHHHHHh
Confidence            588999888 5432 111 1111  122445555553 55554444 32111 110001111111222  3457889999


Q ss_pred             hccEEEecCChHHHHHHHHcCCCEEEEeCC
Q 042754           85 SASLVISHAGSGSIFETLRHGKPLIVVVNE  114 (178)
Q Consensus        85 ~adlvIshaG~~Ti~E~l~~g~P~iviP~~  114 (178)
                      .||++|+-=. |-+.=|.+.|+|.|.+--+
T Consensus       251 ~a~l~I~~DS-g~~HlAaA~~~P~I~iyg~  279 (334)
T COG0859         251 GADLVIGNDS-GPMHLAAALGTPTIALYGP  279 (334)
T ss_pred             cCCEEEccCC-hHHHHHHHcCCCEEEEECC
Confidence            9999999655 7888899999999998533

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional

Probab=89.96  E-value=3  Score=34.40  Aligned_cols=98  Identities=15%  Similarity=0.174  Sum_probs=56.3

Q ss_pred             CcEEEEEeCCc-cHHHH-HHHhccHHHHHHHHhCCCCeEEEEEeCCCcccc--c--ccccCCcceEEEEeC--hhhHHHH
Q 042754           11 KRIVFVTVGTT-CFDAL-VKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPT--K--SLGEDGLMAVDYFTF--SSSIADH   82 (178)
Q Consensus        11 ~~~ilVt~Gs~-~~~~l-~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~--~--~~~~~~~~nv~v~~~--~~~~~~~   82 (178)
                      ++.|++-.|+. ..+.. .+..  .++++.|.+.++ ++++..|+++.+..  .  ......+..+.+.+.  +.++..+
T Consensus       183 ~~~i~i~pga~~~~K~Wp~e~f--a~l~~~L~~~~~-~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~al  259 (352)
T PRK10422        183 QNYVVIQPTARQIFKCWDNDKF--SAVIDALQARGY-EVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGAL  259 (352)
T ss_pred             CCeEEEecCCCccccCCCHHHH--HHHHHHHHHCCC-eEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHH
Confidence            56787777764 22211 1111  112345555576 88777776542211  1  000001111222232  4578899


Q ss_pred             hhhccEEEecCChHHHHHHHHcCCCEEEEe
Q 042754           83 LRSASLVISHAGSGSIFETLRHGKPLIVVV  112 (178)
Q Consensus        83 ~~~adlvIshaG~~Ti~E~l~~g~P~iviP  112 (178)
                      |+.||++|+.=. |.+.=|.++|+|.|.+-
T Consensus       260 i~~a~l~v~nDS-Gp~HlAaA~g~P~v~lf  288 (352)
T PRK10422        260 IDHAQLFIGVDS-APAHIAAAVNTPLICLF  288 (352)
T ss_pred             HHhCCEEEecCC-HHHHHHHHcCCCEEEEE
Confidence            999999999755 78999999999999874

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=89.88  E-value=3.6  Score=31.76  Aligned_cols=74  Identities=15%  Similarity=0.221  Sum_probs=49.6

Q ss_pred             ceEEEEeChh--hHHHHhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhC--CCEEEe--
Q 042754           68 MAVDYFTFSS--SIADHLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR--KHLYCA--  137 (178)
Q Consensus        68 ~nv~v~~~~~--~~~~~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~--G~~~~~--  137 (178)
                      .++...++.+  ++..++..||+++.-    +-+.++.|++++|+|.|.-...        ...+.+.+.  |. +..  
T Consensus       257 ~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~--------~~~e~~~~~~~g~-~~~~~  327 (381)
T COG0438         257 DNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVG--------GIPEVVEDGETGL-LVPPG  327 (381)
T ss_pred             CcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCC--------ChHHHhcCCCceE-ecCCC
Confidence            5677778876  577888989999987    2235579999999999865443        123333333  44 322  


Q ss_pred             ChhhHHHHHHccC
Q 042754          138 HPQSLHQVIAGMD  150 (178)
Q Consensus       138 ~~~~L~~~i~~l~  150 (178)
                      +.+.+.+++..+.
T Consensus       328 ~~~~~~~~i~~~~  340 (381)
T COG0438         328 DVEELADALEQLL  340 (381)
T ss_pred             CHHHHHHHHHHHh
Confidence            3677888877664

>PRK05920 aromatic acid decarboxylase; Validated

Probab=89.15  E-value=5.7  Score=30.60  Aligned_cols=52  Identities=19%  Similarity=0.191  Sum_probs=36.1

Q ss_pred             hccEE-EecCChHHHH----------------HHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 042754           85 SASLV-ISHAGSGSIF----------------ETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC  136 (178)
Q Consensus        85 ~adlv-IshaG~~Ti~----------------E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~  136 (178)
                      .+|++ |.-|-++|+.                +++..++|.+++|.......-...|.+.|.+.|+.+.
T Consensus        93 ~aD~~vVaPaTantlakiA~GiaD~ll~~~a~~~L~~~~pvvi~P~~m~~~~~~~~nl~~L~~~G~~ii  161 (204)
T PRK05920         93 RTDGMVIAPCSMGTLAAIAHGLSDNLIERAADVVLKERRKLILVPRETPLSLIHLENMLKLAEAGAIIL  161 (204)
T ss_pred             ccCEEEEeeCCHhHHHHHHccccCcHHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEe
Confidence            46644 6666666553                5678999999999743222223579999999998763

>TIGR02919 accessory Sec system glycosyltransferase GtfB

Probab=88.78  E-value=4.6  Score=34.79  Aligned_cols=75  Identities=8%  Similarity=0.162  Sum_probs=52.4

Q ss_pred             ceEEEEe-Chh-hHHHHhhhccEE--Eec--CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChh
Q 042754           68 MAVDYFT-FSS-SIADHLRSASLV--ISH--AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-AHPQ  140 (178)
Q Consensus        68 ~nv~v~~-~~~-~~~~~~~~adlv--Ish--aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~~~~  140 (178)
                      .|+..++ |.+ ++.+++..||+.  |+|  +-..++.||+..|+|++..=...+   .+.    ...+ |..+. .+++
T Consensus       328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~----~i~~-g~l~~~~~~~  399 (438)
T TIGR02919       328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRD----FIAS-ENIFEHNEVD  399 (438)
T ss_pred             CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccC---Ccc----cccC-CceecCCCHH
Confidence            5776665 466 799999999987  444  445799999999999998765432   122    2222 55543 4778


Q ss_pred             hHHHHHHccC
Q 042754          141 SLHQVIAGMD  150 (178)
Q Consensus       141 ~L~~~i~~l~  150 (178)
                      .+.++|.+++
T Consensus       400 ~m~~~i~~lL  409 (438)
T TIGR02919       400 QLISKLKDLL  409 (438)
T ss_pred             HHHHHHHHHh
Confidence            8888887774

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.

>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative

Probab=87.59  E-value=5.8  Score=32.50  Aligned_cols=36  Identities=19%  Similarity=0.283  Sum_probs=31.5

Q ss_pred             hhhHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEe
Q 042754           76 SSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVV  112 (178)
Q Consensus        76 ~~~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP  112 (178)
                      +.++..+++.||++||.=. |.+.=|.+.|+|.|.+-
T Consensus       251 L~el~ali~~a~l~Vs~DS-Gp~HlAaA~g~p~v~Lf  286 (344)
T TIGR02201       251 LPQLAALIDHARLFIGVDS-VPMHMAAALGTPLVALF  286 (344)
T ss_pred             HHHHHHHHHhCCEEEecCC-HHHHHHHHcCCCEEEEE
Confidence            4578999999999999744 88999999999999874

This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional

Probab=86.59  E-value=3.3  Score=34.08  Aligned_cols=37  Identities=11%  Similarity=0.239  Sum_probs=31.4

Q ss_pred             hhhHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeC
Q 042754           76 SSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVN  113 (178)
Q Consensus        76 ~~~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~  113 (178)
                      +.++..+++.||++|+-= .|.+.=|.+.|+|.|.+--
T Consensus       252 L~el~ali~~a~l~I~nD-TGp~HlAaA~g~P~valfG  288 (348)
T PRK10916        252 LEQAVILIAACKAIVTND-SGLMHVAAALNRPLVALYG  288 (348)
T ss_pred             HHHHHHHHHhCCEEEecC-ChHHHHHHHhCCCEEEEEC
Confidence            356888999999999964 4889999999999998743

>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB

Probab=85.88  E-value=16  Score=29.20  Aligned_cols=49  Identities=16%  Similarity=0.171  Sum_probs=36.9

Q ss_pred             hHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCE
Q 042754           78 SIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHL  134 (178)
Q Consensus        78 ~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~  134 (178)
                      ++-.+++.||++|+.==+ .+.=++.+|+|.+.+++.       ......+.+.|.-
T Consensus       243 e~~~~i~~~~~vI~~RlH-~~I~A~~~gvP~i~i~y~-------~K~~~~~~~~g~~  291 (298)
T TIGR03609       243 ELLGLFASARLVIGMRLH-ALILAAAAGVPFVALSYD-------PKVRAFAADAGVP  291 (298)
T ss_pred             HHHHHHhhCCEEEEechH-HHHHHHHcCCCEEEeecc-------HHHHHHHHHhCCC
Confidence            567889999999996544 456688899999988652       3666677777754

The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=85.73  E-value=12  Score=27.34  Aligned_cols=85  Identities=24%  Similarity=0.252  Sum_probs=49.9

Q ss_pred             EEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChh--hHHHHhhhccEEE
Q 042754           14 VFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSS--SIADHLRSASLVI   90 (178)
Q Consensus        14 ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~--~~~~~~~~adlvI   90 (178)
                      |+|++||...+ .+.+.         |...+. +++..+=+......     ....++...++.+  .+...+..||.||
T Consensus         1 I~V~GatG~vG~~l~~~---------L~~~~~-~V~~~~R~~~~~~~-----~~~~~~~~~d~~d~~~~~~al~~~d~vi   65 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQ---------LLRRGH-EVTALVRSPSKAED-----SPGVEIIQGDLFDPDSVKAALKGADAVI   65 (183)
T ss_dssp             EEEETTTSHHHHHHHHH---------HHHTTS-EEEEEESSGGGHHH-----CTTEEEEESCTTCHHHHHHHHTTSSEEE
T ss_pred             eEEECCCChHHHHHHHH---------HHHCCC-EEEEEecCchhccc-----ccccccceeeehhhhhhhhhhhhcchhh
Confidence            67888765322 33333         334565 77776644322111     1122333344432  4778889999999


Q ss_pred             ecCC--------hHHHHHHH-HcCCCEEEEeC
Q 042754           91 SHAG--------SGSIFETL-RHGKPLIVVVN  113 (178)
Q Consensus        91 shaG--------~~Ti~E~l-~~g~P~iviP~  113 (178)
                      +-.|        .-++.+++ ..|++-+++..
T Consensus        66 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~v~~s   97 (183)
T PF13460_consen   66 HAAGPPPKDVDAAKNIIEAAKKAGVKRVVYLS   97 (183)
T ss_dssp             ECCHSTTTHHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred             hhhhhhcccccccccccccccccccccceeee
Confidence            9998        55666665 56888887643

...

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=85.58  E-value=11  Score=29.88  Aligned_cols=48  Identities=21%  Similarity=0.331  Sum_probs=32.7

Q ss_pred             ceEEEE--eChhhHHHHh---hhccEEEecCChHH-----HHHHHHcCCCEEEEeCCC
Q 042754           68 MAVDYF--TFSSSIADHL---RSASLVISHAGSGS-----IFETLRHGKPLIVVVNED  115 (178)
Q Consensus        68 ~nv~v~--~~~~~~~~~~---~~adlvIshaG~~T-----i~E~l~~g~P~iviP~~~  115 (178)
                      .++...  ||..+++..|   -.+|++||+-.+++     +.-|..+|+|+|+|=+|.
T Consensus       172 ~~iia~~GPfs~e~n~al~~~~~i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~  229 (249)
T PF02571_consen  172 KNIIAMQGPFSKELNRALFRQYGIDVLVTKESGGSGFDEKIEAARELGIPVIVIKRPP  229 (249)
T ss_pred             hhEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCC
Confidence            344433  5655544443   47899999966555     445788999999998774

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK09620 hypothetical protein; Provisional

Probab=85.30  E-value=8.4  Score=30.16  Aligned_cols=74  Identities=18%  Similarity=0.254  Sum_probs=39.2

Q ss_pred             CcEEEEEeCCc-c------------HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeCh-
Q 042754           11 KRIVFVTVGTT-C------------FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS-   76 (178)
Q Consensus        11 ~~~ilVt~Gs~-~------------~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~-   76 (178)
                      .+.||||.|.. -            .+.+-..+     .+.+...++ +|+++.|.....+...     +.++....+. 
T Consensus         3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~L-----A~~L~~~Ga-~V~li~g~~~~~~~~~-----~~~~~~~~V~s   71 (229)
T PRK09620          3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRII-----AEELISKGA-HVIYLHGYFAEKPNDI-----NNQLELHPFEG   71 (229)
T ss_pred             CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHH-----HHHHHHCCC-eEEEEeCCCcCCCccc-----CCceeEEEEec
Confidence            46789998842 0            12344444     345556786 8999988754211110     1122222221 


Q ss_pred             -----hhHHHHhh--hccEEEecCCh
Q 042754           77 -----SSIADHLR--SASLVISHAGS   95 (178)
Q Consensus        77 -----~~~~~~~~--~adlvIshaG~   95 (178)
                           ..+.+++.  .+|+|||-|..
T Consensus        72 ~~d~~~~l~~~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         72 IIDLQDKMKSIITHEKVDAVIMAAAG   97 (229)
T ss_pred             HHHHHHHHHHHhcccCCCEEEECccc
Confidence                 22444453  57999988775

>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P

Probab=85.29  E-value=6.8  Score=33.07  Aligned_cols=65  Identities=15%  Similarity=0.181  Sum_probs=47.8

Q ss_pred             cceEEEEeChhh--HHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCC
Q 042754           67 LMAVDYFTFSSS--IADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARK  132 (178)
Q Consensus        67 ~~nv~v~~~~~~--~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G  132 (178)
                      ...+.+.||+++  ++.++-.||+-+-||= =|..-|..+|+|.|=-.++..-+-|-..--.++....
T Consensus       243 ~l~l~~lPF~~Q~~yD~LLw~cD~NfVRGE-DSfVRAqwAgkPFvWhIYpQ~d~aHl~KL~AFL~~y~  309 (374)
T PF10093_consen  243 NLTLHVLPFVPQDDYDRLLWACDFNFVRGE-DSFVRAQWAGKPFVWHIYPQEDDAHLDKLDAFLDRYC  309 (374)
T ss_pred             CeEEEECCCCCHHHHHHHHHhCccceEecc-hHHHHHHHhCCCceEecCcCchhhHHHHHHHHHHHHh
Confidence            456888999964  9999999999999955 7999999999999987666322233333334444443

The function is unknown.

>TIGR00732 dprA DNA protecting protein DprA

Probab=85.19  E-value=16  Score=28.43  Aligned_cols=48  Identities=8%  Similarity=0.149  Sum_probs=34.9

Q ss_pred             hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChhhHHH
Q 042754           95 SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQ  144 (178)
Q Consensus        95 ~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~~~~~L~~  144 (178)
                      ..|+..++..|+|+.++|-.  ..+.+..-...|-+.|+....+.+++.+
T Consensus       171 l~ta~~A~~~gr~v~~~pg~--~~~~~~~G~~~Li~~GA~~i~~~~d~~~  218 (220)
T TIGR00732       171 LITARYALEQGREVFAYPGD--LNSPESDGCHKLIEQGAALITSAKDILE  218 (220)
T ss_pred             HHHHHHHHHhCCcEEEEcCC--CCCccchHHHHHHHCCCEEECCHHHHHH
Confidence            35677788999999999865  3344555566777889877777777654

Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=85.13  E-value=1.8  Score=37.37  Aligned_cols=65  Identities=20%  Similarity=0.144  Sum_probs=43.7

Q ss_pred             hhHHHHhhhccEEEecC---C-hHHHHHHHHcCCC----EEEEeCCCCCCchHHHHHHHHHhCCCEE-EeChhhHHHHHH
Q 042754           77 SSIADHLRSASLVISHA---G-SGSIFETLRHGKP----LIVVVNEDLMDNHQSELAEELAARKHLY-CAHPQSLHQVIA  147 (178)
Q Consensus        77 ~~~~~~~~~adlvIsha---G-~~Ti~E~l~~g~P----~iviP~~~~~~~~Q~~nA~~l~~~G~~~-~~~~~~L~~~i~  147 (178)
                      +++..+|+.||+++.-+   | ..++.|++++|+|    .|+--...        .++.+. .|+.+ ..+++.++++|.
T Consensus       347 ~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G--------~~~~l~-~gllVnP~d~~~lA~aI~  417 (456)
T TIGR02400       347 EELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAG--------AAQELN-GALLVNPYDIDGMADAIA  417 (456)
T ss_pred             HHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCC--------ChHHhC-CcEEECCCCHHHHHHHHH
Confidence            46899999999999743   4 4688999999999    66433321        112222 22222 137889999998


Q ss_pred             ccC
Q 042754          148 GMD  150 (178)
Q Consensus       148 ~l~  150 (178)
                      +++
T Consensus       418 ~aL  420 (456)
T TIGR02400       418 RAL  420 (456)
T ss_pred             HHH
Confidence            874

This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib

>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=84.41  E-value=2.1  Score=35.16  Aligned_cols=33  Identities=24%  Similarity=0.368  Sum_probs=27.1

Q ss_pred             HHhhhccEEEecCChHHHHHHHHc----CCCEEEEeC
Q 042754           81 DHLRSASLVISHAGSGSIFETLRH----GKPLIVVVN  113 (178)
Q Consensus        81 ~~~~~adlvIshaG~~Ti~E~l~~----g~P~iviP~  113 (178)
                      .....+|++|+=||=||+..+...    ++|.+-|..
T Consensus        68 ~~~~~~D~vi~lGGDGT~L~aar~~~~~~~PilGIN~  104 (306)
T PRK03372         68 DAADGCELVLVLGGDGTILRAAELARAADVPVLGVNL  104 (306)
T ss_pred             hcccCCCEEEEEcCCHHHHHHHHHhccCCCcEEEEec
Confidence            334579999999999999998764    789888764

>PRK02797 4-alpha-L-fucosyltransferase; Provisional

Probab=83.99  E-value=7  Score=32.20  Aligned_cols=112  Identities=13%  Similarity=0.159  Sum_probs=64.1

Q ss_pred             EEEEEeCCc--cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeC--CCc--ccccc-cc-cCCc-ceEEEE-eCh--hhHH
Q 042754           13 IVFVTVGTT--CFDALVKAVDTLEVKQELTRRGYTHLLIQMGR--GTY--VPTKS-LG-EDGL-MAVDYF-TFS--SSIA   80 (178)
Q Consensus        13 ~ilVt~Gs~--~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~--~~~--~~~~~-~~-~~~~-~nv~v~-~~~--~~~~   80 (178)
                      .+-|..|.+  ..++-++++.   .+....+.++ ++++-.|.  ++.  ..... .+ ...+ .++++. .+.  ++..
T Consensus       146 ~~tIlvGNSgd~SN~Hie~L~---~l~~~~~~~v-~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl  221 (322)
T PRK02797        146 KMTILVGNSGDRSNRHIEALR---ALHQQFGDNV-KIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYL  221 (322)
T ss_pred             ceEEEEeCCCCCcccHHHHHH---HHHHHhCCCe-EEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHH
Confidence            466666733  4555555541   1222234455 77777776  332  11100 00 0112 355443 232  3567


Q ss_pred             HHhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 042754           81 DHLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC  136 (178)
Q Consensus        81 ~~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~  136 (178)
                      .+++.||+.|-.    -|.||+.-++.+|+|.++--..        .-=+.+.+.|+-+.
T Consensus       222 ~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~n--------~fwqdl~e~gv~Vl  273 (322)
T PRK02797        222 ALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRDN--------PFWQDLTEQGLPVL  273 (322)
T ss_pred             HHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecCC--------chHHHHHhCCCeEE
Confidence            889999999864    5899999999999999973221        11233788898763

>cd08549 G1PDH_related Glycerol-1-phosphate_dehydrogenase and related proteins

Probab=83.98  E-value=4.8  Score=33.22  Aligned_cols=30  Identities=23%  Similarity=0.532  Sum_probs=23.7

Q ss_pred             hccEEEecCChHHHHHHH-----HcCCCEEEEeCCC
Q 042754           85 SASLVISHAGSGSIFETL-----RHGKPLIVVVNED  115 (178)
Q Consensus        85 ~adlvIshaG~~Ti~E~l-----~~g~P~iviP~~~  115 (178)
                      .+|+||.=|| |++..+.     ..|+|.|.||...
T Consensus        80 ~~d~IIaiGG-Gsv~D~aK~iA~~~gip~I~VPTT~  114 (332)
T cd08549          80 DTEFLLGIGS-GTIIDLVKFVSFKVGKPFISVPTAP  114 (332)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEeCCCc
Confidence            7999999888 6666653     3599999999763

Bacterial and archeal glycerol-1-phosphate dehydrogenase-like oxidoreductases. The proteins have similarity with glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. It also contains archaeal Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) that plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids.

>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=83.88  E-value=3.9  Score=33.36  Aligned_cols=47  Identities=15%  Similarity=0.208  Sum_probs=39.5

Q ss_pred             cceEEEEeChh--hHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCC
Q 042754           67 LMAVDYFTFSS--SIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNE  114 (178)
Q Consensus        67 ~~nv~v~~~~~--~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~  114 (178)
                      +.++.+.||++  ++++++-.||+-+-+|- -|..-+..+|+|.+---++
T Consensus       237 ~lrvvklPFvpqddyd~LL~lcD~n~VRGE-DSFVRAq~agkPflWHIYp  285 (370)
T COG4394         237 KLRVVKLPFVPQDDYDELLWLCDFNLVRGE-DSFVRAQLAGKPFLWHIYP  285 (370)
T ss_pred             ceEEEEecCCcHhHHHHHHHhcccceeecc-hHHHHHHHcCCCcEEEecC
Confidence            34677889986  49999999999999955 8999999999999975555

>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2

Probab=83.63  E-value=1.9  Score=29.56  Aligned_cols=36  Identities=31%  Similarity=0.651  Sum_probs=27.8

Q ss_pred             hHHHHhhhccEEEe---c--CChHHHHHH---HHcCCCEEEEeCC
Q 042754           78 SIADHLRSASLVIS---H--AGSGSIFET---LRHGKPLIVVVNE  114 (178)
Q Consensus        78 ~~~~~~~~adlvIs---h--aG~~Ti~E~---l~~g~P~iviP~~  114 (178)
                      ++ ..|..||+||.   .  .+.||.+|+   .+.|+|++++-..
T Consensus        55 d~-~~i~~~D~via~l~~~~~d~Gt~~ElG~A~algkpv~~~~~d   98 (113)
T PF05014_consen   55 DL-EGIRECDIVIANLDGFRPDSGTAFELGYAYALGKPVILLTED   98 (113)
T ss_dssp             HH-HHHHHSSEEEEEECSSS--HHHHHHHHHHHHTTSEEEEEECC
T ss_pred             HH-HHHHHCCEEEEECCCCCCCCcHHHHHHHHHHCCCEEEEEEcC
Confidence            44 78899999874   2  578999996   6799999998654

4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=83.05  E-value=2.1  Score=33.36  Aligned_cols=79  Identities=16%  Similarity=0.220  Sum_probs=41.5

Q ss_pred             CcEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEe---------ChhhHH
Q 042754           11 KRIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFT---------FSSSIA   80 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~---------~~~~~~   80 (178)
                      .-+||+|+|+.|.+ .|.+.+         ...+  .-|++||.+...-...........-.+.+         ++.-+.
T Consensus         5 gnTiLITGG~sGIGl~lak~f---------~elg--N~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLk   73 (245)
T COG3967           5 GNTILITGGASGIGLALAKRF---------LELG--NTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLK   73 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHH---------HHhC--CEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHH
Confidence            35799999988765 344443         3333  56688999863111100000011111222         111233


Q ss_pred             HHhhhccEEEecCChHHHHH
Q 042754           81 DHLRSASLVISHAGSGSIFE  100 (178)
Q Consensus        81 ~~~~~adlvIshaG~~Ti~E  100 (178)
                      .-++.-+++|-.||..--.|
T Consensus        74 k~~P~lNvliNNAGIqr~~d   93 (245)
T COG3967          74 KEYPNLNVLINNAGIQRNED   93 (245)
T ss_pred             hhCCchheeeecccccchhh
Confidence            34478899999999654333

>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated

Probab=83.04  E-value=15  Score=27.61  Aligned_cols=56  Identities=13%  Similarity=0.084  Sum_probs=35.9

Q ss_pred             HHhhhccEE-EecCChHHHHHH-------------HHc--CCCEEEEeCC---CCCCchHHHHHHHHHhCCCEEE
Q 042754           81 DHLRSASLV-ISHAGSGSIFET-------------LRH--GKPLIVVVNE---DLMDNHQSELAEELAARKHLYC  136 (178)
Q Consensus        81 ~~~~~adlv-IshaG~~Ti~E~-------------l~~--g~P~iviP~~---~~~~~~Q~~nA~~l~~~G~~~~  136 (178)
                      ++-.++|++ |.-+-++|+.-.             ++.  ++|.|++|..   .....--.+|.++|.+.|+-+.
T Consensus        73 ~l~~~aD~~vIaPaTantlakiA~GiaDnllt~~~~a~~~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi  147 (182)
T PRK07313         73 ELAKRADLFLVAPATANTIAKLAHGIADDLVTSVALALPATTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEI  147 (182)
T ss_pred             ccccccCEEEEeeCCHhHHHHHHccccCcHHHHHHHHcCCCCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEE
Confidence            344667755 666777765443             445  8999999972   1111112468999999998754

>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis

Probab=82.69  E-value=4  Score=29.21  Aligned_cols=63  Identities=21%  Similarity=0.361  Sum_probs=38.8

Q ss_pred             HHHhhhccEEEecCC-----hHHHHH---HHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeChhhHHHHHH
Q 042754           80 ADHLRSASLVISHAG-----SGSIFE---TLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIA  147 (178)
Q Consensus        80 ~~~~~~adlvIshaG-----~~Ti~E---~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~~~~~L~~~i~  147 (178)
                      ..+|..||+||-+=|     .|+.+.   ++++|+|.|++-.+.    ++-. -+.+...-.+++-+++...+.|+
T Consensus        67 ~~li~~aDvVVvrFGekYKQWNaAfDAg~a~AlgKplI~lh~~~----~~Hp-LKEvda~A~a~~et~~Qvv~iL~  137 (141)
T PF11071_consen   67 RTLIEKADVVVVRFGEKYKQWNAAFDAGYAAALGKPLITLHPEE----LHHP-LKEVDAAALAVAETPEQVVEILR  137 (141)
T ss_pred             HHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchh----cccc-HHHHhHhhHhhhCCHHHHHHHHH
Confidence            578999999999988     345554   578999999885432    2111 11122222234457776666554

This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=82.43  E-value=25  Score=28.63  Aligned_cols=34  Identities=21%  Similarity=0.225  Sum_probs=22.3

Q ss_pred             HHHhhh--ccEEEecCChHHHH---HHHHcCCCEEEEeC
Q 042754           80 ADHLRS--ASLVISHAGSGSIF---ETLRHGKPLIVVVN  113 (178)
Q Consensus        80 ~~~~~~--adlvIshaG~~Ti~---E~l~~g~P~iviP~  113 (178)
                      ..++..  .|+|++|.....+.   -+...++|.|....
T Consensus        84 ~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~  122 (357)
T PRK00726         84 RKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQ  122 (357)
T ss_pred             HHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcC
Confidence            344544  79999997544333   34567899987643

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=82.35  E-value=5.8  Score=33.82  Aligned_cols=75  Identities=19%  Similarity=0.278  Sum_probs=40.1

Q ss_pred             CCcEEEEEeCCccHHH-HHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEE--eCh--hhHHHHhh
Q 042754           10 LKRIVFVTVGTTCFDA-LVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYF--TFS--SSIADHLR   84 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~-l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~--~~~--~~~~~~~~   84 (178)
                      ..++++||+||.|.+. +.+         .+.+.+. ++++..............  ...++..+  +..  .++.+.+.
T Consensus       177 ~gK~VLITGASgGIG~aLA~---------~La~~G~-~Vi~l~r~~~~l~~~~~~--~~~~v~~v~~Dvsd~~~v~~~l~  244 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLK---------ELHQQGA-KVVALTSNSDKITLEING--EDLPVKTLHWQVGQEAALAELLE  244 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHH---------HHHHCCC-EEEEEeCCHHHHHHHHhh--cCCCeEEEEeeCCCHHHHHHHhC
Confidence            4578999999886653 333         3345575 776654332211110000  01122222  222  23566778


Q ss_pred             hccEEEecCChH
Q 042754           85 SASLVISHAGSG   96 (178)
Q Consensus        85 ~adlvIshaG~~   96 (178)
                      ..|++|+.+|.+
T Consensus       245 ~IDiLInnAGi~  256 (406)
T PRK07424        245 KVDILIINHGIN  256 (406)
T ss_pred             CCCEEEECCCcC
Confidence            899999999864

>PF13685 Fe-ADH_2: Iron-containing alcohol dehydrogenase; PDB: 3CE9_C

Probab=82.10  E-value=2.9  Score=33.30  Aligned_cols=34  Identities=32%  Similarity=0.553  Sum_probs=21.4

Q ss_pred             hccEEEecCChHHHHHH-----HHcCCCEEEEeCCCCCCc
Q 042754           85 SASLVISHAGSGSIFET-----LRHGKPLIVVVNEDLMDN  119 (178)
Q Consensus        85 ~adlvIshaG~~Ti~E~-----l~~g~P~iviP~~~~~~~  119 (178)
                      .+|++|.=|| ||+...     -..|+|.+.||...+.|+
T Consensus        75 ~~d~ii~vGg-G~i~D~~K~~A~~~~~p~isVPTa~S~DG  113 (250)
T PF13685_consen   75 DADLIIGVGG-GTIIDIAKYAAFELGIPFISVPTAASHDG  113 (250)
T ss_dssp             T--EEEEEES-HHHHHHHHHHHHHHT--EEEEES--SSGG
T ss_pred             CCCEEEEeCC-cHHHHHHHHHHHhcCCCEEEecccccccc
Confidence            6789999766 788765     458999999998754443

>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=81.37  E-value=3  Score=33.46  Aligned_cols=30  Identities=20%  Similarity=0.435  Sum_probs=25.3

Q ss_pred             hhccEEEecCChHHHHHHHH------cCCCEEEEeC
Q 042754           84 RSASLVISHAGSGSIFETLR------HGKPLIVVVN  113 (178)
Q Consensus        84 ~~adlvIshaG~~Ti~E~l~------~g~P~iviP~  113 (178)
                      ..+|++|+-||=||+..++.      .++|.+-|..
T Consensus        34 ~~~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~   69 (265)
T PRK04885         34 KNPDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHT   69 (265)
T ss_pred             cCCCEEEEECCcHHHHHHHHHhcccCCCCeEEEEeC
Confidence            46899999999999999986      4789887754

>cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate

Probab=80.72  E-value=5.6  Score=33.51  Aligned_cols=30  Identities=27%  Similarity=0.372  Sum_probs=22.6

Q ss_pred             hhccEEEecCChHHHHHHH---H--c------------------CCCEEEEeCC
Q 042754           84 RSASLVISHAGSGSIFETL---R--H------------------GKPLIVVVNE  114 (178)
Q Consensus        84 ~~adlvIshaG~~Ti~E~l---~--~------------------g~P~iviP~~  114 (178)
                      ..+|+||.=|| |+++.+.   +  +                  ++|.|.||..
T Consensus        78 ~~~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt  130 (386)
T cd08191          78 AGPDVIIGLGG-GSCIDLAKIAGLLLAHGGDVRDYYGEFKVPGPVLPLIAVPTT  130 (386)
T ss_pred             cCCCEEEEeCC-chHHHHHHHHHHHHhCCCCHHHHhCccccCCCCCCEEEEeCC
Confidence            47899999877 6666543   1  1                  7899999976

6-hydroxyhexanoate dehydrogenase (HHD). The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. Some bacteria can grow on cyclic ketones, cyclohexylamine, and alcohols as sole carbon source. Cyclohexylamine is an insecticide and antiseptic in various industries and is considered a possible environmental pollutant. The degradation of these chemical compounds are through the cyclohexanol and cyclohexanone biological oxidation pathway. The intermediates of this pathway include cyclohexanol, cyclohexanone, e-caprolactone, 6-hydroxyhexanoate, 6-oxohexanoate and adipate. The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate.

>cd07766 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH)

Probab=80.63  E-value=7.2  Score=31.90  Aligned_cols=30  Identities=33%  Similarity=0.574  Sum_probs=23.0

Q ss_pred             hhccEEEecCChHHHHHHHH-----c--CCCEEEEeCC
Q 042754           84 RSASLVISHAGSGSIFETLR-----H--GKPLIVVVNE  114 (178)
Q Consensus        84 ~~adlvIshaG~~Ti~E~l~-----~--g~P~iviP~~  114 (178)
                      ..+|+||.=|| |+++++.-     +  |+|.|.||..
T Consensus        77 ~~~d~IIaiGG-Gs~~D~aK~ia~~~~~~~p~i~iPTt  113 (332)
T cd07766          77 AEVDAVIAVGG-GSTLDTAKAVAALLNRGLPIIIVPTT  113 (332)
T ss_pred             cCcCEEEEeCC-chHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            36899999877 66666532     3  9999999975

Dehydroquinate synthase-like. This superfamily divides into two subgroups: the dehydroquinate synthase-like, and a large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. Dehydroquinate synthase-like group includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. The alcohol dehydrogenases in this superfamily contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alc

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=80.35  E-value=19  Score=30.63  Aligned_cols=55  Identities=20%  Similarity=0.168  Sum_probs=37.1

Q ss_pred             HHhhhccEE-EecCChHHHHHH-------------HHcCCCEEEEeCCC---CCCchHHHHHHHHHhCCCEE
Q 042754           81 DHLRSASLV-ISHAGSGSIFET-------------LRHGKPLIVVVNED---LMDNHQSELAEELAARKHLY  135 (178)
Q Consensus        81 ~~~~~adlv-IshaG~~Ti~E~-------------l~~g~P~iviP~~~---~~~~~Q~~nA~~l~~~G~~~  135 (178)
                      ++..++|++ |.-|-++|+.-.             ++.++|.+++|...   ....--.+|..+|.+.|+-+
T Consensus        78 ~l~~~aD~~vVaPaTaNtlaKiA~GiaDnllt~~~la~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~i  149 (399)
T PRK05579         78 ELAKWADLVLIAPATADLIAKLAHGIADDLLTTTLLATTAPVLVAPAMNTQMWENPATQRNLATLRSRGVEI  149 (399)
T ss_pred             hcccccCEEEEeeCCHHHHHHHHcccCCcHHHHHHHhcCCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEE
Confidence            555678865 677777776654             55789999999321   11111246999999999876

>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=80.08  E-value=4.5  Score=32.94  Aligned_cols=33  Identities=27%  Similarity=0.412  Sum_probs=26.9

Q ss_pred             HHhhhccEEEecCChHHHHHHHH----cCCCEEEEeC
Q 042754           81 DHLRSASLVISHAGSGSIFETLR----HGKPLIVVVN  113 (178)
Q Consensus        81 ~~~~~adlvIshaG~~Ti~E~l~----~g~P~iviP~  113 (178)
                      ++...+|++|+=||=||+..++.    .++|++-|-.
T Consensus        60 ~~~~~~dlvi~lGGDGT~L~aa~~~~~~~~PilGIN~   96 (292)
T PRK01911         60 ELDGSADMVISIGGDGTFLRTATYVGNSNIPILGINT   96 (292)
T ss_pred             hcccCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEec
Confidence            44457999999999999999887    3789887754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	178
2ks6_A	201	Nmr Solution Structure Of Alg13 --- Obtained With I		2e-17
2jzc_A	224	Nmr Solution Structure Of Alg13: The Sugar Donor Su		2e-17

>pdb|2KS6|A Chain A, Nmr Solution Structure Of Alg13 --- Obtained With Iterative Cs-Rosetta From Backbone Nmr Data Length = 201

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 34/180 (18%)
Query: 11  KRIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRG--------------- 54
           ++ +FVT G T  F  LV  V + E  QEL + G+  L+IQ GR                
Sbjct: 5   EKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQ 64
Query: 55  ---TYVPTKSLG----------EDGLMAVDYFTFSSSIADHLRSAS-LVISHAGSGSIFE 100
                +P    G           +G + V  F FS+ +   +R  S LVISHAG+GSI +
Sbjct: 65  RESQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILD 124
Query: 101 TLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGM---DLESLLPY 157
           +LR  KPLIV VN+ LMDNHQ ++A++     +++   P     +IAG+     E L P+
Sbjct: 125 SLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCAPTETG-LIAGLRASQTEKLKPF 183

>pdb|2JZC|A Chain A, Nmr Solution Structure Of Alg13: The Sugar Donor Subunit Of A Yeast N-Acetylglucosamine Transferase. Northeast Structural Genomics Consortium Target Yg1 Length = 224

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 34/180 (18%)
Query: 11  KRIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRG--------------- 54
           ++ +FVT G T  F  LV  V + E  QEL + G+  L+IQ GR                
Sbjct: 28  EKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQ 87
Query: 55  ---TYVPTKSLG----------EDGLMAVDYFTFSSSIADHLRSAS-LVISHAGSGSIFE 100
                +P    G           +G + V  F FS+ +   +R  S LVISHAG+GSI +
Sbjct: 88  RESQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILD 147
Query: 101 TLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHPQSLHQVIAGM---DLESLLPY 157
           +LR  KPLIV VN+ LMDNHQ ++A++     +++   P     +IAG+     E L P+
Sbjct: 148 SLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCAPTETG-LIAGLRASQTEKLKPF 206

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	178
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	1e-49
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	6e-07
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	9e-07
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	1e-06
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	5e-06
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	9e-06
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	3e-05
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	3e-05
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	4e-05
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	5e-05
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	6e-05
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	3e-04
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	8e-04

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A Length = 224

 Score =  158 bits (401), Expect = 1e-49
 Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 32/202 (15%)

Query: 4   TRDSVSLKRIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVP---- 58
             + +  ++ +FVT G T  F  LV  V + E  QEL + G+  L+IQ GR         
Sbjct: 21  MLEGIIEEKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHL 80

Query: 59  ------------------------TKSLGEDGLMAVDYFTFSSSIADHLRS-ASLVISHA 93
                                    + +  +G + V  F FS+ +   +R  + LVISHA
Sbjct: 81  VQERGGQRESQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHA 140

Query: 94  GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAHP--QSLHQVIAGMDL 151
           G+GSI ++LR  KPLIV VN+ LMDNHQ ++A++     +++   P    L   +     
Sbjct: 141 GTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCAPTETGLIAGLRASQT 200

Query: 152 ESLLPYQPGDATPVAKLINRFL 173
           E L P+         +L+   +
Sbjct: 201 EKLKPFPVSHNPSFERLLVETI 222

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430

 Score = 47.5 bits (113), Expect = 6e-07
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 11/103 (10%)

Query: 11  KRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGE--DGLM 68
           +++V V++G+          + +            HL++Q+GR   V    LGE  D + 
Sbjct: 232 EKVVLVSLGSAFTKQPAFYRECVRA---FGNLPGWHLVLQIGRK--VTPAELGELPDNVE 286

Query: 69  AVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVV 111
             D+          LR A L ++HAG+G   E L    P+I V
Sbjct: 287 VHDWVPQL----AILRQADLFVTHAGAGGSQEGLATATPMIAV 325

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415

 Score = 47.0 bits (112), Expect = 9e-07
 Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 30/112 (26%)

Query: 11  KRIVFVTVGTTC------FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGE 64
             +V V++GTT       F    +A D              H+++ +G    V   +LG+
Sbjct: 247 LPVVLVSLGTTFNDRPGFFRDCARAFDGQPW----------HVVMTLGGQ--VDPAALGD 294

Query: 65  --DGLMAVDYFTFSSSIADH---LRSASLVISHAGSGSIFETLRHGKPLIVV 111
               + A  +         H   L  A++ ++H G G++ E L  G+PL+VV
Sbjct: 295 LPPNVEAHRW-------VPHVKVLEQATVCVTHGGMGTLMEALYWGRPLVVV 339

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 30/112 (26%)

Query: 11  KRIVFVTVGTTC------FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGE 64
           + ++ + +G+        +   + AVD L+           H+++ +GR   V    LGE
Sbjct: 255 RPVLLIALGSAFTDHLDFYRTCLSAVDGLDW----------HVVLSVGRF--VDPADLGE 302

Query: 65  --DGLMAVDYFTFSSSIADH---LRSASLVISHAGSGSIFETLRHGKPLIVV 111
               +    +             L  AS  I+HAG GS  E L +  P++ V
Sbjct: 303 VPPNVEVHQW-------VPQLDILTKASAFITHAGMGSTMEALSNAVPMVAV 347

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402

 Score = 44.3 bits (105), Expect = 5e-06
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 33/132 (25%)

Query: 11  KRIVFVTVGTTC------FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGE 64
             ++ V++G         F A  +A                H+++ +G    +    LG 
Sbjct: 231 APVLLVSLGNQFNEHPEFFRACAQAFADTPW----------HVVMAIGGF--LDPAVLGP 278

Query: 65  --DGLMAVDYFTFSSSIADH---LRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDN 119
               + A  +             L  A   ++H  +G++ E    G PL++V        
Sbjct: 279 LPPNVEAHQW-------IPFHSVLAHARACLTHGTTGAVLEAFAAGVPLVLVP---HFAT 328

Query: 120 HQSELAEELAAR 131
             +  AE +   
Sbjct: 329 EAAPSAERVIEL 340

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412

 Score = 43.9 bits (104), Expect = 9e-06
 Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 30/112 (26%)

Query: 11  KRIVFVTVGTT------CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGE 64
           + +V++T+GT+         A +  +  L+            +L+  G    +    LGE
Sbjct: 242 RPLVYLTLGTSSGGTVEVLRAAIDGLAGLDA----------DVLVASGPS--LDVSGLGE 289

Query: 65  --DGLMAVDYFTFSSSIADH---LRSASLVISHAGSGSIFETLRHGKPLIVV 111
               +    +             L    LV+ H GSG+    L  G P +  
Sbjct: 290 VPANVRLESW-------VPQAALLPHVDLVVHHGGSGTTLGALGAGVPQLSF 334

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398

 Score = 42.1 bits (99), Expect = 3e-05
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 14/128 (10%)

Query: 11  KRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAV 70
           +  V +T+GT    A    +  +E             ++ +G     P  +L    + AV
Sbjct: 232 RPEVAITMGTIELQAF--GIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLP-RNVRAV 288

Query: 71  DYFTFSSSIADH---LRSASLVISHAGSGSIFETLRHGKPLIVV-VNEDLMDNHQSELAE 126
            +             LR+ + V+ H G G++   +  G P ++     D   +   E   
Sbjct: 289 GW-------TPLHTLLRTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVS 341

Query: 127 ELAARKHL 134
                   
Sbjct: 342 RRGIGLVS 349

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 441

 Score = 42.1 bits (99), Expect = 3e-05
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 83  LRSASLVISHAGSGSIFETLRHGKPLIVV 111
           L + +  + H G GS      HG P +++
Sbjct: 333 LPTCAATVHHGGPGSWHTAAIHGVPQVIL 361

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391

 Score = 42.1 bits (99), Expect = 4e-05
 Identities = 21/103 (20%), Positives = 30/103 (29%), Gaps = 12/103 (11%)

Query: 12  RIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD 71
           R V + +G             L      T       +I +          L  D     +
Sbjct: 219 RRVCICMGRM-VLNATGPAPLLRAVAAATELPGVEAVIAVPPEHRALLTDLP-DNARIAE 276

Query: 72  YFTFSSSIADH---LRSASLVISHAGSGSIFETLRHGKPLIVV 111
                         LR+  LVI   GSG+ F   R G P +V+
Sbjct: 277 S-------VPLNLFLRTCELVICAGGSGTAFTATRLGIPQLVL 312

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384

 Score = 41.7 bits (98), Expect = 5e-05
 Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 6/50 (12%)

Query: 83  LRSASLVISHAGSGSIFETLRHGKPLIVV-VNEDLMDNHQSELAEELAAR 131
             +  L++ HAG  S    L  G P +++              A  +A  
Sbjct: 277 APTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSV-----LEAPARRVADY 321

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Length = 398

 Score = 41.2 bits (97), Expect = 6e-05
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 83  LRSASLVISHAGSGSIFETLRHGKPLIVV 111
           + +  +V+ H G G+    L  G P + V
Sbjct: 298 MPACDVVVHHGGHGTTLTCLSEGVPQVSV 326

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 38.4 bits (88), Expect = 3e-04
 Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 9/32 (28%)

Query: 140 QSLHQVIAGMDLE-SLLPYQPGDATPVAKLIN 170
           Q+L +      L+ SL  Y   D+ P A  I 
Sbjct: 20  QALKK------LQASLKLYAD-DSAP-ALAIK 43

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 416

 Score = 38.3 bits (89), Expect = 8e-04
 Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 9/101 (8%)

Query: 11  KRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAV 70
              V +  G++   +     D  +V  E  R     +++  G    V       D   A+
Sbjct: 237 SPPVHIGFGSS---SGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDR--DDCFAI 291

Query: 71  DYFTFSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVV 111
           D   F        R  + VI H  +G+     R G P +V+
Sbjct: 292 DEVNFQ----ALFRRVAAVIHHGSAGTEHVATRAGVPQLVI 328

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	178
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	100.0
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.96
2o6l_A	170	UDP-glucuronosyltransferase 2B7; drug metabolism,	99.88
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	99.87
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	99.86
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	99.85
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	99.85
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	99.85
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	99.85
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	99.84
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	99.83
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	99.82
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	99.81
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	99.81
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	99.81
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	99.8
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	99.79
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	99.79
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	99.79
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	99.78
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	99.78
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.78
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	99.75
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	99.63
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.32
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.24
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.16
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	99.14
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.01
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	98.78
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	98.54
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	98.39
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	98.36
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	98.22
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	98.21
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	98.2
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	98.19
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	98.15
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	97.92
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	97.8
2xci_A	374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	97.75
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	97.74
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	97.71
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	97.67
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	97.64
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	97.63
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	97.57
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	97.57
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	97.31
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	96.79
3tov_A	349	Glycosyl transferase family 9; structural genomics	96.49
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	96.31
3qua_A	199	Putative uncharacterized protein; structural genom	96.08
2gt1_A	326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	96.01
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	95.99
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	95.64
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	95.06
3sbx_A	189	Putative uncharacterized protein; structural genom	94.73
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	94.15
1ydh_A	216	AT5G11950; structural genomics, protein structure	93.66
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	93.63
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	92.82
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	92.49
1g63_A	181	Epidermin modifying enzyme EPID; alpha, beta prote	89.21
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	87.74
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	87.55
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	87.04
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	86.35
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	86.16
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	85.89
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	85.86
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	85.79
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	85.69
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	85.47
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	84.84
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	84.81
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	84.53
3ehd_A	162	Uncharacterized conserved protein; PSI,MCSG,PF0501	84.45
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	83.91
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	83.88
1s2d_A	167	Purine trans deoxyribosylase; ribosylate intermedi	83.75
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	83.69
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	83.66
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	83.48
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	82.46
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	82.42
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	82.31
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	81.87
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	81.87
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	81.72
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	81.62
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	81.5
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	81.5
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	81.37
1t35_A	191	Hypothetical protein YVDD, putative lysine decarbo	80.68
2khz_A	165	C-MYC-responsive protein RCL; flexible loop, nucle	80.45
3ox4_A	383	Alcohol dehydrogenase 2; iron, NAD, oxidoreductase	80.3
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	80.23
3bq9_A	460	Predicted rossmann fold nucleotide-binding domain	80.03

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A

Probab=100.00  E-value=1.5e-32  Score=212.58  Aligned_cols=169  Identities=33%  Similarity=0.507  Sum_probs=139.4

Q ss_pred             CCCCCCcEEEEEeCCcc-HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccc---cc------------------
Q 042754            6 DSVSLKRIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKS---LG------------------   63 (178)
Q Consensus         6 ~~~~~~~~ilVt~Gs~~-~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~---~~------------------   63 (178)
                      ...+++|+||||+||+. ++.+...+....+++.|.+.++.++++|||++.+.....   .+                  
T Consensus        23 ~~~~~~~~VlVtgGS~~~~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~  102 (224)
T 2jzc_A           23 EGIIEEKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGD  102 (224)
T ss_dssp             -CCCCSCCEEEECCSCCSCHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTC
T ss_pred             CCCCCCCEEEEEcCCchHHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccc
Confidence            33457899999999985 788877775566677887766239999999876511110   00                  


Q ss_pred             -------cCCcceEEEEeChhhHHHHhh-hccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE
Q 042754           64 -------EDGLMAVDYFTFSSSIADHLR-SASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLY  135 (178)
Q Consensus        64 -------~~~~~nv~v~~~~~~~~~~~~-~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~  135 (178)
                             .....++.+++|+++|.++|+ +||+||||||+||++|++++|+|+|+||++...++||..||+++++.|+++
T Consensus       103 ~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~  182 (224)
T 2jzc_A          103 TARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVW  182 (224)
T ss_dssp             SCEEEESTTTSSEEEECCSSSSHHHHHHHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCC
T ss_pred             cccccccccCCceEEEeeccchHHHHHHhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEE
Confidence                   011247889999999999999 999999999999999999999999999998878899999999999999998


Q ss_pred             EeChhhHHHHHHcc--CcccCCCCCCCChhHHHHHHHHhcC
Q 042754          136 CAHPQSLHQVIAGM--DLESLLPYQPGDATPVAKLINRFLG  174 (178)
Q Consensus       136 ~~~~~~L~~~i~~l--~~~~~~~~~~~~~~~i~~~i~~~~~  174 (178)
                      .++++.|.++|.++  ...++++|+.++...|.+.|.+++|
T Consensus       183 ~~~~~~L~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  223 (224)
T 2jzc_A          183 SCAPTETGLIAGLRASQTEKLKPFPVSHNPSFERLLVETIY  223 (224)
T ss_dssp             EECSCTTTHHHHHHHHTTCCCCSCCCSSSCTHHHHHHHHCC
T ss_pred             EcCHHHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhc
Confidence            78999999999998  5578999988777799999998876

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=99.96  E-value=5.6e-29  Score=205.18  Aligned_cols=163  Identities=20%  Similarity=0.119  Sum_probs=127.3

Q ss_pred             CCCCcEEEEEeCCccHHHHHHHhccHHHHHHHHh-CCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhc
Q 042754            8 VSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTR-RGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSA   86 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~-~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~a   86 (178)
                      .++++.+||++||+|...+++.+  .+++..+.. .+. +++++||.+..+.....+...+.++++++|++||.++|++|
T Consensus       177 ~~~~~~ilv~gGs~g~~~~~~~~--~~al~~l~~~~~~-~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~a  253 (365)
T 3s2u_A          177 TGRRVNLLVLGGSLGAEPLNKLL--PEALAQVPLEIRP-AIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWA  253 (365)
T ss_dssp             TTSCCEEEECCTTTTCSHHHHHH--HHHHHTSCTTTCC-EEEEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHHHHC
T ss_pred             CCCCcEEEEECCcCCccccchhh--HHHHHhcccccce-EEEEecCccccccccceecccccccccccchhhhhhhhccc
Confidence            45678999999999988888877  333444432 234 79999998765332222222356889999999999999999


Q ss_pred             cEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccC---------cc
Q 042754           87 SLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMD---------LE  152 (178)
Q Consensus        87 dlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~---------~~  152 (178)
                      |++|||+|++|++|++++|+|+|++|+++..++||..||+++++.|+++.+     +++.|.++|.+++         ..
T Consensus       254 DlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~  333 (365)
T 3s2u_A          254 DLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMAD  333 (365)
T ss_dssp             SEEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHH
T ss_pred             eEEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHH
Confidence            999999999999999999999999999988889999999999999999864     6788999998874         23


Q ss_pred             cCCCCCCCChh-HHHHHHHHhc
Q 042754          153 SLLPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       153 ~~~~~~~~~~~-~i~~~i~~~~  173 (178)
                      +.+.+..++++ +|++.|+++.
T Consensus       334 ~a~~~~~~~aa~~ia~~i~~la  355 (365)
T 3s2u_A          334 QARSLAKPEATRTVVDACLEVA  355 (365)
T ss_dssp             HHHHTCCTTHHHHHHHHHHHHC
T ss_pred             HHHhcCCccHHHHHHHHHHHHH
Confidence            45667788888 9999999875

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}

Probab=99.88  E-value=5.3e-22  Score=146.36  Aligned_cols=124  Identities=15%  Similarity=0.224  Sum_probs=100.3

Q ss_pred             CCCcEEEEEeCCccH---HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHh--
Q 042754            9 SLKRIVFVTVGTTCF---DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHL--   83 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~---~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~--   83 (178)
                      +++++|||++||.+.   ......+     ++++...++ ++++++|......       .+.|+++.+|+++ .++|  
T Consensus        19 ~~~~~vlv~~Gs~~~~~~~~~~~~~-----~~al~~~~~-~~~~~~g~~~~~~-------~~~~v~~~~~~~~-~~~l~~   84 (170)
T 2o6l_A           19 GENGVVVFSLGSMVSNMTEERANVI-----ASALAQIPQ-KVLWRFDGNKPDT-------LGLNTRLYKWIPQ-NDLLGH   84 (170)
T ss_dssp             TTTCEEEEECCSCCTTCCHHHHHHH-----HHHHTTSSS-EEEEECCSSCCTT-------CCTTEEEESSCCH-HHHHTS
T ss_pred             CCCCEEEEECCCCcccCCHHHHHHH-----HHHHHhCCC-eEEEEECCcCccc-------CCCcEEEecCCCH-HHHhcC
Confidence            457899999999852   2333333     456665665 8999998754211       2458999999987 6888  


Q ss_pred             hhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccC
Q 042754           84 RSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMD  150 (178)
Q Consensus        84 ~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~  150 (178)
                      ++||++|||||++|++|++++|+|+|++|..    +||..||+++++.|+++.+     ++++|.++|.+++
T Consensus        85 ~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~----~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll  152 (170)
T 2o6l_A           85 PKTRAFITHGGANGIYEAIYHGIPMVGIPLF----ADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVI  152 (170)
T ss_dssp             TTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHH
T ss_pred             CCcCEEEEcCCccHHHHHHHcCCCEEeccch----hhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999985    5899999999999999864     6788999998885

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=99.87  E-value=8.4e-22  Score=163.81  Aligned_cols=148  Identities=17%  Similarity=0.128  Sum_probs=117.5

Q ss_pred             CCCcEEEEEeCCcc-HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhcc
Q 042754            9 SLKRIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSAS   87 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~-~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~ad   87 (178)
                      +++|+|||++||.+ ...+.+.+     ++.+...++ ++++++|........     .+.|+.+.+|+++ .++|+.||
T Consensus       219 ~~~~~Vlv~~Gs~~~~~~~~~~~-----~~al~~~~~-~vv~~~g~~~~~~~~-----~~~~v~~~~~~~~-~~ll~~~d  286 (404)
T 3h4t_A          219 AGSPPVYVGFGSGPAPAEAARVA-----IEAVRAQGR-RVVLSSGWAGLGRID-----EGDDCLVVGEVNH-QVLFGRVA  286 (404)
T ss_dssp             TSSCCEEECCTTSCCCTTHHHHH-----HHHHHHTTC-CEEEECTTTTCCCSS-----CCTTEEEESSCCH-HHHGGGSS
T ss_pred             cCCCeEEEECCCCCCcHHHHHHH-----HHHHHhCCC-EEEEEeCCccccccc-----CCCCEEEecCCCH-HHHHhhCc
Confidence            35689999999986 34444444     455566676 999999976543221     3578999999974 89999999


Q ss_pred             EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCc--------ccC
Q 042754           88 LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDL--------ESL  154 (178)
Q Consensus        88 lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~--------~~~  154 (178)
                      ++|||||+||++|++++|+|+|++|..    +||..||+++++.|++..+     ++++|.++|.+++.        ...
T Consensus       287 ~~v~~gG~~t~~Eal~~GvP~v~~p~~----~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~  362 (404)
T 3h4t_A          287 AVVHHGGAGTTTAVTRAGAPQVVVPQK----ADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALTPGIRARAAAVA  362 (404)
T ss_dssp             EEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred             EEEECCcHHHHHHHHHcCCCEEEcCCc----ccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            999999999999999999999999985    5899999999999999763     78899999988853        112


Q ss_pred             CCCCCCChh-HHHHHHHHhc
Q 042754          155 LPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       155 ~~~~~~~~~-~i~~~i~~~~  173 (178)
                      +.+.. ++. +++++|++.+
T Consensus       363 ~~~~~-~~~~~~~~~i~~~~  381 (404)
T 3h4t_A          363 GTIRT-DGTTVAAKLLLEAI  381 (404)
T ss_dssp             TTCCC-CHHHHHHHHHHHHH
T ss_pred             HHHhh-hHHHHHHHHHHHHH
Confidence            34555 777 9999998876

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=99.86  E-value=2.8e-21  Score=160.88  Aligned_cols=151  Identities=17%  Similarity=0.267  Sum_probs=113.6

Q ss_pred             CCCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhc
Q 042754            9 SLKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSA   86 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~a   86 (178)
                      +++++|+|++||.+.  ..+...+     ++.+...++ ++++++|.+......   ...+.|+++.+|++++ ++|++|
T Consensus       253 ~~~~~v~v~~Gs~~~~~~~~~~~~-----~~al~~~~~-~~~~~~g~~~~~~~~---~~~~~~v~~~~~~~~~-~~l~~~  322 (424)
T 2iya_A          253 DGRPVLLIALGSAFTDHLDFYRTC-----LSAVDGLDW-HVVLSVGRFVDPADL---GEVPPNVEVHQWVPQL-DILTKA  322 (424)
T ss_dssp             SSCCEEEEECCSSSCCCHHHHHHH-----HHHHTTCSS-EEEEECCTTSCGGGG---CSCCTTEEEESSCCHH-HHHTTC
T ss_pred             CCCCEEEEEcCCCCcchHHHHHHH-----HHHHhcCCc-EEEEEECCcCChHHh---ccCCCCeEEecCCCHH-HHHhhC
Confidence            457899999999852  2333333     455655665 999999976432111   1135689999999987 899999


Q ss_pred             cEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCcc-----cC--
Q 042754           87 SLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDLE-----SL--  154 (178)
Q Consensus        87 dlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~~-----~~--  154 (178)
                      |++|||||+||++|++++|+|+|++|..    +||..||+++++.|+++.+     ++++|.++|++++.+     ++  
T Consensus       323 d~~v~~~G~~t~~Ea~~~G~P~i~~p~~----~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~  398 (424)
T 2iya_A          323 SAFITHAGMGSTMEALSNAVPMVAVPQI----AEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAA  398 (424)
T ss_dssp             SEEEECCCHHHHHHHHHTTCCEEECCCS----HHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             CEEEECCchhHHHHHHHcCCCEEEecCc----cchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHHHHHHHH
Confidence            9999999999999999999999999985    5899999999999999754     678899999888521     11  


Q ss_pred             --CCCCCCChh-HHHHHHHHhc
Q 042754          155 --LPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       155 --~~~~~~~~~-~i~~~i~~~~  173 (178)
                        +.+...++. ++++.|++++
T Consensus       399 ~~~~~~~~~~~~~~~~~i~~~~  420 (424)
T 2iya_A          399 VRQEIREAGGARAAADILEGIL  420 (424)
T ss_dssp             HHHHHHTSCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCcHHHHHHHHHHHH
Confidence              112233555 8888887764

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=99.85  E-value=1.3e-21  Score=164.02  Aligned_cols=153  Identities=12%  Similarity=0.110  Sum_probs=110.2

Q ss_pred             CCCcEEEEEeCCccHH--HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhc
Q 042754            9 SLKRIVFVTVGTTCFD--ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSA   86 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~~--~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~a   86 (178)
                      +++++|||++||.+..  ...+.+  ..+++++...++ ++++++|........    ..+.|+++.+|+++ .++|++|
T Consensus       265 ~~~~~v~v~~Gs~~~~~~~~~~~~--~~~~~al~~~~~-~~v~~~g~~~~~~l~----~~~~~v~~~~~~~~-~~ll~~a  336 (441)
T 2yjn_A          265 PERRRVCLTLGISSRENSIGQVSI--EELLGAVGDVDA-EIIATFDAQQLEGVA----NIPDNVRTVGFVPM-HALLPTC  336 (441)
T ss_dssp             CSSCEEEEEC----------CCST--TTTHHHHHTSSS-EEEECCCTTTTSSCS----SCCSSEEECCSCCH-HHHGGGC
T ss_pred             CCCCEEEEECCCCcccccChHHHH--HHHHHHHHcCCC-EEEEEECCcchhhhc----cCCCCEEEecCCCH-HHHHhhC
Confidence            4578999999998653  122222  122556666676 999999965432211    13568999999986 7999999


Q ss_pred             cEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCcc-----c---
Q 042754           87 SLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDLE-----S---  153 (178)
Q Consensus        87 dlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~~-----~---  153 (178)
                      |++|||||++|++|++++|+|+|++|..    +||..||+++++.|+++.+     +++.|.++|.+++.+     +   
T Consensus       337 d~~V~~~G~~t~~Ea~~~G~P~i~~p~~----~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~  412 (441)
T 2yjn_A          337 AATVHHGGPGSWHTAAIHGVPQVILPDG----WDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAAR  412 (441)
T ss_dssp             SEEEECCCHHHHHHHHHTTCCEEECCCS----HHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             CEEEECCCHHHHHHHHHhCCCEEEeCCc----ccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHH
Confidence            9999999999999999999999999974    6899999999999999754     678899999887421     1   


Q ss_pred             -CCCCCCCChh-HHHHHHHHhc
Q 042754          154 -LLPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       154 -~~~~~~~~~~-~i~~~i~~~~  173 (178)
                       .+.+...++. ++++.|++++
T Consensus       413 ~~~~~~~~~~~~~~~~~i~~~~  434 (441)
T 2yjn_A          413 MRDDMLAEPSPAEVVGICEELA  434 (441)
T ss_dssp             HHHHHHTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHHHHHHHHHHHH
Confidence             1222334455 8899888765

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.85  E-value=2e-20  Score=155.60  Aligned_cols=148  Identities=18%  Similarity=0.152  Sum_probs=112.2

Q ss_pred             CCcEEEEEeCCccH---HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhc
Q 042754           10 LKRIVFVTVGTTCF---DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSA   86 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~---~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~a   86 (178)
                      ++++|+|++||.+.   ..+.+.+     ++.+...++ ++++++|...... .    ..+.|+.+.+|++ +.++|++|
T Consensus       236 ~~~~v~v~~Gs~~~~~~~~~~~~~-----~~al~~~~~-~~v~~~g~~~~~~-~----~~~~~v~~~~~~~-~~~ll~~~  303 (416)
T 1rrv_A          236 GSPPVHIGFGSSSGRGIADAAKVA-----VEAIRAQGR-RVILSRGWTELVL-P----DDRDDCFAIDEVN-FQALFRRV  303 (416)
T ss_dssp             SSCCEEECCTTCCSHHHHHHHHHH-----HHHHHHTTC-CEEEECTTTTCCC-S----CCCTTEEEESSCC-HHHHGGGS
T ss_pred             CCCeEEEecCCCCccChHHHHHHH-----HHHHHHCCC-eEEEEeCCccccc-c----CCCCCEEEeccCC-hHHHhccC
Confidence            35789999999863   3334433     556666676 9999999875321 1    1356899999998 68999999


Q ss_pred             cEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCcc---------
Q 042754           87 SLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDLE---------  152 (178)
Q Consensus        87 dlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~~---------  152 (178)
                      |++|||||+||++|++++|+|+|++|..    +||..||+++++.|+|+.+     ++++|.++|+++ .+         
T Consensus       304 d~~v~~~G~~t~~Ea~~~G~P~i~~p~~----~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~  378 (416)
T 1rrv_A          304 AAVIHHGSAGTEHVATRAGVPQLVIPRN----TDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAPETRARAEA  378 (416)
T ss_dssp             SEEEECCCHHHHHHHHHHTCCEEECCCS----BTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHHHHH
T ss_pred             CEEEecCChhHHHHHHHcCCCEEEccCC----CCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHHHHH
Confidence            9999999999999999999999999984    6899999999999999753     678899999887 21         


Q ss_pred             cCCCCCCCChhHHHHHH-HHhcC
Q 042754          153 SLLPYQPGDATPVAKLI-NRFLG  174 (178)
Q Consensus       153 ~~~~~~~~~~~~i~~~i-~~~~~  174 (178)
                      ..+.+...++.++++.| ++++.
T Consensus       379 ~~~~~~~~~~~~~~~~i~e~~~~  401 (416)
T 1rrv_A          379 VAGMVLTDGAAAAADLVLAAVGR  401 (416)
T ss_dssp             HTTTCCCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHhhcCcHHHHHHHHHHHhc
Confidence            12223333322777877 76653

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=99.85  E-value=9.9e-22  Score=161.72  Aligned_cols=157  Identities=15%  Similarity=0.156  Sum_probs=108.1

Q ss_pred             CCCCCCcEEEEEeCCccHHH-HHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhh
Q 042754            6 DSVSLKRIVFVTVGTTCFDA-LVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLR   84 (178)
Q Consensus         6 ~~~~~~~~ilVt~Gs~~~~~-l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~   84 (178)
                      +..+++++|+|++||.+... ..+.+  ..+++.+.+.+. ++++.+|........    ..+.|+.+.+|+| +.++|+
T Consensus       232 ~~~~~~~~v~vs~Gs~~~~~~~~~~~--~~~~~~l~~~~~-~~v~~~~~~~~~~~~----~~~~~v~~~~~~p-~~~lL~  303 (400)
T 4amg_A          232 PPAAGRRRIAVTLGSIDALSGGIAKL--APLFSEVADVDA-EFVLTLGGGDLALLG----ELPANVRVVEWIP-LGALLE  303 (400)
T ss_dssp             SCCTTCCEEEECCCSCC--CCSSSTT--HHHHHHGGGSSS-EEEEECCTTCCCCCC----CCCTTEEEECCCC-HHHHHT
T ss_pred             cccCCCcEEEEeCCcccccCccHHHH--HHHHHHhhccCc-eEEEEecCccccccc----cCCCCEEEEeecC-HHHHhh
Confidence            34567889999999974321 11111  222456667775 888888876543222    2467999999997 589999


Q ss_pred             hccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEeC-hhhHHHHHHccCc-----ccC----
Q 042754           85 SASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCAH-PQSLHQVIAGMDL-----ESL----  154 (178)
Q Consensus        85 ~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~~-~~~L~~~i~~l~~-----~~~----  154 (178)
                      +||++|||||+||++|++++|+|+|++|..    .||..||+++++.|+++.+. .+.+.++|++++.     .+.    
T Consensus       304 ~~~~~v~h~G~~s~~Eal~~GvP~v~~P~~----~dQ~~na~~v~~~G~g~~l~~~~~~~~al~~lL~d~~~r~~a~~l~  379 (400)
T 4amg_A          304 TCDAIIHHGGSGTLLTALAAGVPQCVIPHG----SYQDTNRDVLTGLGIGFDAEAGSLGAEQCRRLLDDAGLREAALRVR  379 (400)
T ss_dssp             TCSEEEECCCHHHHHHHHHHTCCEEECCC-------CHHHHHHHHHHTSEEECCTTTCSHHHHHHHHHCHHHHHHHHHHH
T ss_pred             hhhheeccCCccHHHHHHHhCCCEEEecCc----ccHHHHHHHHHHCCCEEEcCCCCchHHHHHHHHcCHHHHHHHHHHH
Confidence            999999999999999999999999999985    58999999999999998653 3333455555531     111    


Q ss_pred             CCCC-CCChhHHHHHHHHhcC
Q 042754          155 LPYQ-PGDATPVAKLINRFLG  174 (178)
Q Consensus       155 ~~~~-~~~~~~i~~~i~~~~~  174 (178)
                      +.+. .+.++++++.|+++.|
T Consensus       380 ~~~~~~~~~~~~a~~le~lAG  400 (400)
T 4amg_A          380 QEMSEMPPPAETAAXLVALAG  400 (400)
T ss_dssp             HHHHTSCCHHHHHHHHHHHC-
T ss_pred             HHHHcCCCHHHHHHHHHHhhC
Confidence            1111 2244589999988765

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.85  E-value=6.9e-21  Score=158.49  Aligned_cols=148  Identities=17%  Similarity=0.144  Sum_probs=112.8

Q ss_pred             CCcEEEEEeCCcc-HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhccE
Q 042754           10 LKRIVFVTVGTTC-FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASL   88 (178)
Q Consensus        10 ~~~~ilVt~Gs~~-~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~adl   88 (178)
                      ++++|||++||.+ ...+.+.+     ++.+...+. ++++++|.+.... .    ..+.|+.+.+|+++ .++|++||+
T Consensus       237 ~~~~v~v~~Gs~~~~~~~~~~~-----~~al~~~~~-~~v~~~g~~~~~~-~----~~~~~v~~~~~~~~-~~~l~~~d~  304 (415)
T 1iir_A          237 GPPPVYLGFGSLGAPADAVRVA-----IDAIRAHGR-RVILSRGWADLVL-P----DDGADCFAIGEVNH-QVLFGRVAA  304 (415)
T ss_dssp             SSCCEEEECC---CCHHHHHHH-----HHHHHHTTC-CEEECTTCTTCCC-S----SCGGGEEECSSCCH-HHHGGGSSE
T ss_pred             CCCeEEEeCCCCCCcHHHHHHH-----HHHHHHCCC-eEEEEeCCCcccc-c----CCCCCEEEeCcCCh-HHHHhhCCE
Confidence            3578999999985 55555555     455566675 8999999765321 1    13568999999987 588999999


Q ss_pred             EEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCcc-----c----C
Q 042754           89 VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDLE-----S----L  154 (178)
Q Consensus        89 vIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~~-----~----~  154 (178)
                      +|||||++|++|++++|+|+|++|..    +||..||+++++.|+|+.+     ++++|.++|+++ .+     +    .
T Consensus       305 ~v~~~G~~t~~Ea~~~G~P~i~~p~~----~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~  379 (415)
T 1iir_A          305 VIHHGGAGTTHVAARAGAPQILLPQM----ADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LTPETHARATAVA  379 (415)
T ss_dssp             EEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHHHHHHH
T ss_pred             EEeCCChhHHHHHHHcCCCEEECCCC----CccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHHHHHHH
Confidence            99999999999999999999999984    5899999999999999754     678899999887 32     1    1


Q ss_pred             CCCCCCChh-HHHHHHHHhcC
Q 042754          155 LPYQPGDAT-PVAKLINRFLG  174 (178)
Q Consensus       155 ~~~~~~~~~-~i~~~i~~~~~  174 (178)
                      +.+...++. ++++.|++++.
T Consensus       380 ~~~~~~~~~~~~~~~i~~~~~  400 (415)
T 1iir_A          380 GTIRTDGAAVAARLLLDAVSR  400 (415)
T ss_dssp             HHSCSCHHHHHHHHHHHHHHT
T ss_pred             HHHhhcChHHHHHHHHHHHHh
Confidence            123345555 89999988764

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=99.84  E-value=1e-20  Score=156.63  Aligned_cols=152  Identities=16%  Similarity=0.274  Sum_probs=115.0

Q ss_pred             CCCCcEEEEEeCCcc--HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhh
Q 042754            8 VSLKRIVFVTVGTTC--FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRS   85 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~--~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~   85 (178)
                      .+++++|+|++||.+  ...+...+     ++.+...++ ++++++|.+......   ...+.|+++.+|++++ ++|+.
T Consensus       244 ~~~~~~v~v~~Gs~~~~~~~~~~~~-----~~al~~~~~-~~v~~~g~~~~~~~l---~~~~~~v~~~~~~~~~-~ll~~  313 (415)
T 3rsc_A          244 ADDLPVVLVSLGTTFNDRPGFFRDC-----ARAFDGQPW-HVVMTLGGQVDPAAL---GDLPPNVEAHRWVPHV-KVLEQ  313 (415)
T ss_dssp             SSCCCEEEEECTTTSCCCHHHHHHH-----HHHHTTSSC-EEEEECTTTSCGGGG---CCCCTTEEEESCCCHH-HHHHH
T ss_pred             CCCCCEEEEECCCCCCChHHHHHHH-----HHHHhcCCc-EEEEEeCCCCChHHh---cCCCCcEEEEecCCHH-HHHhh
Confidence            456899999999974  22344444     456666665 999999976422111   1235789999999986 99999


Q ss_pred             ccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCcc-----c--
Q 042754           86 ASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDLE-----S--  153 (178)
Q Consensus        86 adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~~-----~--  153 (178)
                      ||++|||||++|++|++++|+|+|++|..    .||..||+++++.|+++.+     +++.|.++|.+++.+     +  
T Consensus       314 ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~----~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~  389 (415)
T 3rsc_A          314 ATVCVTHGGMGTLMEALYWGRPLVVVPQS----FDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVE  389 (415)
T ss_dssp             EEEEEESCCHHHHHHHHHTTCCEEECCCS----GGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             CCEEEECCcHHHHHHHHHhCCCEEEeCCc----chHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCHHHHHHHH
Confidence            99999999999999999999999999974    5899999999999999764     678899999888521     1  


Q ss_pred             --CCCCCCCChh-HHHHHHHHhc
Q 042754          154 --LLPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       154 --~~~~~~~~~~-~i~~~i~~~~  173 (178)
                        .+.+...++. ++++.|++++
T Consensus       390 ~~~~~~~~~~~~~~~~~~i~~~~  412 (415)
T 3rsc_A          390 AMRGHVRRAGGAARAADAVEAYL  412 (415)
T ss_dssp             HHHHHHHHSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCHHHHHHHHHHHHh
Confidence              1223334555 8888887764

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=99.83  E-value=1.7e-20  Score=154.10  Aligned_cols=153  Identities=14%  Similarity=0.213  Sum_probs=115.2

Q ss_pred             CCCCcEEEEEeCCccHH--HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhh
Q 042754            8 VSLKRIVFVTVGTTCFD--ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRS   85 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~~~--~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~   85 (178)
                      .+++++|+|++||.+..  .+...+     ++.+...++ ++++++|.+......   ...+.|+++.+|++++ ++|+.
T Consensus       228 ~~~~~~v~v~~G~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~g~~~~~~~~---~~~~~~v~~~~~~~~~-~ll~~  297 (402)
T 3ia7_A          228 RPDAPVLLVSLGNQFNEHPEFFRAC-----AQAFADTPW-HVVMAIGGFLDPAVL---GPLPPNVEAHQWIPFH-SVLAH  297 (402)
T ss_dssp             STTCCEEEEECCSCSSCCHHHHHHH-----HHHHTTSSC-EEEEECCTTSCGGGG---CSCCTTEEEESCCCHH-HHHTT
T ss_pred             CCCCCEEEEECCCCCcchHHHHHHH-----HHHHhcCCc-EEEEEeCCcCChhhh---CCCCCcEEEecCCCHH-HHHhh
Confidence            45688999999987432  233333     456666665 999999976432111   1235789999999987 99999


Q ss_pred             ccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCcc-----c--
Q 042754           86 ASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDLE-----S--  153 (178)
Q Consensus        86 adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~~-----~--  153 (178)
                      ||++|||||++|++|++++|+|+|++|.+   ..||..||+++++.|++..+     +++.|.+++.+++.+     +  
T Consensus       298 ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~---~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~  374 (402)
T 3ia7_A          298 ARACLTHGTTGAVLEAFAAGVPLVLVPHF---ATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAVRERVR  374 (402)
T ss_dssp             EEEEEECCCHHHHHHHHHTTCCEEECGGG---CGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             CCEEEECCCHHHHHHHHHhCCCEEEeCCC---cccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHHHH
Confidence            99999999999999999999999999973   25899999999999999764     678899999888521     1  


Q ss_pred             --CCCCCCCChh-HHHHHHHHhc
Q 042754          154 --LLPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       154 --~~~~~~~~~~-~i~~~i~~~~  173 (178)
                        .+.+...++. ++++.|++++
T Consensus       375 ~~~~~~~~~~~~~~~~~~i~~~~  397 (402)
T 3ia7_A          375 RMQRDILSSGGPARAADEVEAYL  397 (402)
T ss_dssp             HHHHHHHTSCHHHHHHHHHHHHH
T ss_pred             HHHHHHhhCChHHHHHHHHHHHH
Confidence              1223334555 8888887765

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=99.82  E-value=3.9e-20  Score=156.60  Aligned_cols=131  Identities=15%  Similarity=0.112  Sum_probs=100.2

Q ss_pred             CCCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccccc-ccCCcceEEEEeChhhHHHHhh-
Q 042754            9 SLKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSL-GEDGLMAVDYFTFSSSIADHLR-   84 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~-~~~~~~nv~v~~~~~~~~~~~~-   84 (178)
                      +++++|||++||.+.  ....+.+     +..|...++ ++++++|.......... ..+.+.|+.+.+|+|++ ++|+ 
T Consensus       269 ~~~~vv~vs~GS~~~~~~~~~~~~-----~~~l~~~~~-~~lw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~-~vL~h  341 (456)
T 2c1x_A          269 KPTSVVYISFGTVTTPPPAEVVAL-----SEALEASRV-PFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQA-EVLAH  341 (456)
T ss_dssp             CTTCEEEEECCSSCCCCHHHHHHH-----HHHHHHHTC-CEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHH-HHHTS
T ss_pred             CCcceEEEecCccccCCHHHHHHH-----HHHHHhcCC-eEEEEECCcchhhCCHHHHhhcCCceEEecCCCHH-HHhcC
Confidence            467899999999853  2223332     445555675 99999997642211100 00113588999999985 7888 


Q ss_pred             -hccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEEEe-----ChhhHHHHHHccC
Q 042754           85 -SASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR-KHLYCA-----HPQSLHQVIAGMD  150 (178)
Q Consensus        85 -~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~-G~~~~~-----~~~~L~~~i~~l~  150 (178)
                       +||++|||||+||++|++++|+|+|++|..    .||..||+++++. |+|+.+     +.++|.++|++++
T Consensus       342 ~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~----~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll  410 (456)
T 2c1x_A          342 EAVGAFVTHCGWNSLWESVAGGVPLICRPFF----GDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQIL  410 (456)
T ss_dssp             TTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHH
T ss_pred             CcCCEEEecCCcchHHHHHHhCceEEecCCh----hhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHH
Confidence             889999999999999999999999999985    5899999999999 999854     6788999988875

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=99.81  E-value=6.3e-20  Score=146.52  Aligned_cols=115  Identities=17%  Similarity=0.114  Sum_probs=88.7

Q ss_pred             CCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc--ccccCCcceEEEEeChhhHHHHhhhcc
Q 042754           10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK--SLGEDGLMAVDYFTFSSSIADHLRSAS   87 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~--~~~~~~~~nv~v~~~~~~~~~~~~~ad   87 (178)
                      ..+.||||+|+.+...+...+     +++|...  .++.+++|++......  .... ...|+++++|+++|.++|++||
T Consensus       156 ~~~~ILv~~GG~d~~~l~~~v-----l~~L~~~--~~i~vv~G~~~~~~~~l~~~~~-~~~~v~v~~~~~~m~~~m~~aD  227 (282)
T 3hbm_A          156 KKYDFFICMGGTDIKNLSLQI-----ASELPKT--KIISIATSSSNPNLKKLQKFAK-LHNNIRLFIDHENIAKLMNESN  227 (282)
T ss_dssp             CCEEEEEECCSCCTTCHHHHH-----HHHSCTT--SCEEEEECTTCTTHHHHHHHHH-TCSSEEEEESCSCHHHHHHTEE
T ss_pred             cCCeEEEEECCCchhhHHHHH-----HHHhhcC--CCEEEEECCCchHHHHHHHHHh-hCCCEEEEeCHHHHHHHHHHCC
Confidence            467899999876544455444     3444332  2788899988643221  1111 1248999999999999999999


Q ss_pred             EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe
Q 042754           88 LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA  137 (178)
Q Consensus        88 lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~  137 (178)
                      ++||+|| +|++|++++|+|+|++|..    +||..||+++++.|+++.+
T Consensus       228 lvI~~gG-~T~~E~~~~g~P~i~ip~~----~~Q~~nA~~l~~~G~~~~~  272 (282)
T 3hbm_A          228 KLIISAS-SLVNEALLLKANFKAICYV----KNQESTATWLAKKGYEVEY  272 (282)
T ss_dssp             EEEEESS-HHHHHHHHTTCCEEEECCS----GGGHHHHHHHHHTTCEEEC
T ss_pred             EEEECCc-HHHHHHHHcCCCEEEEeCC----CCHHHHHHHHHHCCCEEEc
Confidence            9999988 8999999999999999974    6899999999999999765

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=99.81  E-value=1.2e-20  Score=154.88  Aligned_cols=150  Identities=12%  Similarity=0.173  Sum_probs=111.4

Q ss_pred             CCCcEEEEEeCCccHH-------HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHH
Q 042754            9 SLKRIVFVTVGTTCFD-------ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIAD   81 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~~-------~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~   81 (178)
                      +++++|+|++||.+..       .....+     ++++...++ ++++++|+.......    ..+.|+.+ +|++ +.+
T Consensus       208 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~-----~~al~~~~~-~~~~~~g~~~~~~l~----~~~~~v~~-~~~~-~~~  275 (384)
T 2p6p_A          208 DTRQRVLVTSGSRVAKESYDRNFDFLRGL-----AKDLVRWDV-ELIVAAPDTVAEALR----AEVPQARV-GWTP-LDV  275 (384)
T ss_dssp             CSSCEEEEECSSSSSCCSSCCCCTTHHHH-----HHHHHTTTC-EEEEECCHHHHHHHH----HHCTTSEE-ECCC-HHH
T ss_pred             CCCCEEEEECCCCCccccccccHHHHHHH-----HHHHhcCCc-EEEEEeCCCCHHhhC----CCCCceEE-cCCC-HHH
Confidence            4568999999997542       333333     445555676 999999864221111    12458899 9996 689


Q ss_pred             HhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCcc----
Q 042754           82 HLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDLE----  152 (178)
Q Consensus        82 ~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~~----  152 (178)
                      +|++||++|||||++|++|++++|+|+|++|..    +||..||+++++.|+|+.+     +++.|.++|.+++.+    
T Consensus       276 ~l~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~----~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~  351 (384)
T 2p6p_A          276 VAPTCDLLVHHAGGVSTLTGLSAGVPQLLIPKG----SVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDTYA  351 (384)
T ss_dssp             HGGGCSEEEECSCTTHHHHHHHTTCCEEECCCS----HHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHH
T ss_pred             HHhhCCEEEeCCcHHHHHHHHHhCCCEEEccCc----ccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHH
Confidence            999999999999999999999999999999974    6899999999999999754     678899999887421    


Q ss_pred             -----cCCCCCCCChh-HHHHHHHHhcC
Q 042754          153 -----SLLPYQPGDAT-PVAKLINRFLG  174 (178)
Q Consensus       153 -----~~~~~~~~~~~-~i~~~i~~~~~  174 (178)
                           ..+.+...++. +++++|+++++
T Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~  379 (384)
T 2p6p_A          352 RRAQDLSREISGMPLPATVVTALEQLAH  379 (384)
T ss_dssp             HHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHhh
Confidence                 11223334445 99999988763

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=99.81  E-value=4.1e-20  Score=152.50  Aligned_cols=147  Identities=17%  Similarity=0.152  Sum_probs=100.6

Q ss_pred             CCCcEEEEEeCCccHH----------HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhh
Q 042754            9 SLKRIVFVTVGTTCFD----------ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSS   78 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~~----------~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~   78 (178)
                      ++++.|||++||....          .+.+.+     ++++...++ ++++++|........    ..+.|+++.+|++ 
T Consensus       225 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~-----~~al~~~~~-~~v~~~~~~~~~~l~----~~~~~v~~~~~~~-  293 (398)
T 4fzr_A          225 RKQPRLCLTFGTRVPLPNTNTIPGGLSLLQAL-----SQELPKLGF-EVVVAVSDKLAQTLQ----PLPEGVLAAGQFP-  293 (398)
T ss_dssp             CSSCEEECC----------------CCSHHHH-----HHHGGGGTC-EEEECCCC------------CCTTEEEESCCC-
T ss_pred             CCCCEEEEEccCcccccccccccchHHHHHHH-----HHHHHhCCC-EEEEEeCCcchhhhc----cCCCcEEEeCcCC-
Confidence            4678999999987421          122332     455555675 899998876432211    2357899999995 


Q ss_pred             HHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCcc-
Q 042754           79 IADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDLE-  152 (178)
Q Consensus        79 ~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~~-  152 (178)
                      +.++|+.||++|||||++|++|++++|+|+|++|..    ++|..||+++++.|+|+.+     +++.|.++|.+++.+ 
T Consensus       294 ~~~ll~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~----~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~  369 (398)
T 4fzr_A          294 LSAIMPACDVVVHHGGHGTTLTCLSEGVPQVSVPVI----AEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDS  369 (398)
T ss_dssp             HHHHGGGCSEEEECCCHHHHHHHHHTTCCEEECCCS----GGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCT
T ss_pred             HHHHHhhCCEEEecCCHHHHHHHHHhCCCEEecCCc----hhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCH
Confidence            899999999999999999999999999999999974    5899999999999999754     678899999887521 


Q ss_pred             --------cCCCCCCCChh-HHHHHHH
Q 042754          153 --------SLLPYQPGDAT-PVAKLIN  170 (178)
Q Consensus       153 --------~~~~~~~~~~~-~i~~~i~  170 (178)
                              ..+.+....+. ++++.|+
T Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (398)
T 4fzr_A          370 SYVGNARRLAAEMATLPTPADIVRLIE  396 (398)
T ss_dssp             HHHHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence                    12233333444 7777664

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=99.80  E-value=2.7e-19  Score=152.20  Aligned_cols=132  Identities=14%  Similarity=0.082  Sum_probs=98.4

Q ss_pred             CCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcc------cccccccCCcceEEEEeChhhHHHH
Q 042754            9 SLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYV------PTKSLGEDGLMAVDYFTFSSSIADH   82 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~------~~~~~~~~~~~nv~v~~~~~~~~~~   82 (178)
                      +++++|+|++||.+...... +  .+++..|...++ ++++++|.....      +.... ...+.|+.+.+|+|++ ++
T Consensus       293 ~~~~vv~vs~GS~~~~~~~~-~--~~~~~~l~~~~~-~~l~~~~~~~~~~~~~~l~~~~~-~~~~~~~~v~~~~pq~-~~  366 (482)
T 2pq6_A          293 EPGSVVYVNFGSTTVMTPEQ-L--LEFAWGLANCKK-SFLWIIRPDLVIGGSVIFSSEFT-NEIADRGLIASWCPQD-KV  366 (482)
T ss_dssp             CTTCEEEEECCSSSCCCHHH-H--HHHHHHHHHTTC-EEEEECCGGGSTTTGGGSCHHHH-HHHTTTEEEESCCCHH-HH
T ss_pred             CCCceEEEecCCcccCCHHH-H--HHHHHHHHhcCC-cEEEEEcCCccccccccCcHhHH-HhcCCCEEEEeecCHH-HH
Confidence            45789999999975311111 1  122456667776 999999965311      11000 0123589999999986 68


Q ss_pred             hhh--ccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHH-hCCCEEEe----ChhhHHHHHHccC
Q 042754           83 LRS--ASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELA-ARKHLYCA----HPQSLHQVIAGMD  150 (178)
Q Consensus        83 ~~~--adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~-~~G~~~~~----~~~~L~~~i~~l~  150 (178)
                      |++  ++++|||||+||++|++++|+|+|++|..    .||..||++++ +.|+|+.+    +.++|.++|++++
T Consensus       367 L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~----~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll  437 (482)
T 2pq6_A          367 LNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFF----ADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVI  437 (482)
T ss_dssp             HTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEecCCcchHHHHHHcCCCEEecCcc----cchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHH
Confidence            855  66699999999999999999999999986    58999999997 79999864    7889999998885

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=99.79  E-value=4.4e-19  Score=150.37  Aligned_cols=130  Identities=17%  Similarity=0.154  Sum_probs=98.1

Q ss_pred             CCCcEEEEEeCCcc-H--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCC-CcccccccccCC--cceEEEEeChhhHHHH
Q 042754            9 SLKRIVFVTVGTTC-F--DALVKAVDTLEVKQELTRRGYTHLLIQMGRG-TYVPTKSLGEDG--LMAVDYFTFSSSIADH   82 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~-~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~-~~~~~~~~~~~~--~~nv~v~~~~~~~~~~   82 (178)
                      +++++|||++||.+ .  ....+.+     +..|...++ ++++++|.+ ...+.... ...  +.|+.+.+|+|++ ++
T Consensus       274 ~~~~vv~vs~GS~~~~~~~~~~~~~-----~~~l~~~~~-~~l~~~~~~~~~l~~~~~-~~~~~~~~~~v~~w~pq~-~v  345 (463)
T 2acv_A          274 PDKSVVFLCFGSMGVSFGPSQIREI-----ALGLKHSGV-RFLWSNSAEKKVFPEGFL-EWMELEGKGMICGWAPQV-EV  345 (463)
T ss_dssp             CTTCEEEEECCSSCCCCCHHHHHHH-----HHHHHHHTC-EEEEECCCCGGGSCTTHH-HHHHHHCSEEEESSCCHH-HH
T ss_pred             CCCceEEEEeccccccCCHHHHHHH-----HHHHHhCCC-cEEEEECCCcccCChhHH-HhhccCCCEEEEccCCHH-HH
Confidence            45789999999987 2  1222332     455655676 999999975 11111100 011  3578899999986 66


Q ss_pred             hh--hccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHH-HhCCCEEEe-----------ChhhHHHHHHc
Q 042754           83 LR--SASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEEL-AARKHLYCA-----------HPQSLHQVIAG  148 (178)
Q Consensus        83 ~~--~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l-~~~G~~~~~-----------~~~~L~~~i~~  148 (178)
                      |+  ++|++|||||+||++|++++|+|+|++|..    +||..||+++ ++.|+|+.+           +.++|.++|++
T Consensus       346 L~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~----~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~  421 (463)
T 2acv_A          346 LAHKAIGGFVSHCGWNSILESMWFGVPILTWPIY----AEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKD  421 (463)
T ss_dssp             HHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCS----TTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHH
T ss_pred             hCCCccCeEEecCCchhHHHHHHcCCCeeeccch----hhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHH
Confidence            75  799999999999999999999999999984    5899999995 899999755           46789999988


Q ss_pred             cC
Q 042754          149 MD  150 (178)
Q Consensus       149 l~  150 (178)
                      ++
T Consensus       422 ll  423 (463)
T 2acv_A          422 LM  423 (463)
T ss_dssp             HT
T ss_pred             HH
Confidence            86

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=99.79  E-value=1e-19  Score=150.24  Aligned_cols=154  Identities=16%  Similarity=0.197  Sum_probs=108.4

Q ss_pred             CCCCcEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhc
Q 042754            8 VSLKRIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSA   86 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~a   86 (178)
                      .+++++|||++||.+.. .-.+.+  ..+++.+...++ ++++++|+.......    ..+.|+++.+|+ ++.++|+.|
T Consensus       229 ~~~~~~v~v~~G~~~~~~~~~~~~--~~~~~~l~~~~~-~~v~~~g~~~~~~l~----~~~~~v~~~~~~-~~~~ll~~a  300 (398)
T 3oti_A          229 VPARPEVAITMGTIELQAFGIGAV--EPIIAAAGEVDA-DFVLALGDLDISPLG----TLPRNVRAVGWT-PLHTLLRTC  300 (398)
T ss_dssp             CCSSCEEEECCTTTHHHHHCGGGH--HHHHHHHHTSSS-EEEEECTTSCCGGGC----SCCTTEEEESSC-CHHHHHTTC
T ss_pred             CCCCCEEEEEcCCCccccCcHHHH--HHHHHHHHcCCC-EEEEEECCcChhhhc----cCCCcEEEEccC-CHHHHHhhC
Confidence            35678999999998432 111112  222456666676 999999986532211    235789999999 589999999


Q ss_pred             cEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHH--HHHHhCCCEEEe-----ChhhHHHHHHccC-----cccC
Q 042754           87 SLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELA--EELAARKHLYCA-----HPQSLHQVIAGMD-----LESL  154 (178)
Q Consensus        87 dlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA--~~l~~~G~~~~~-----~~~~L~~~i~~l~-----~~~~  154 (178)
                      |++|||||++|++|++++|+|+|++|..    ++|..||  +++++.|+|+.+     +++.|.+.+..-.     ....
T Consensus       301 d~~v~~~G~~t~~Eal~~G~P~v~~p~~----~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~  376 (398)
T 3oti_A          301 TAVVHHGGGGTVMTAIDAGIPQLLAPDP----RDQFQHTAREAVSRRGIGLVSTSDKVDADLLRRLIGDESLRTAAREVR  376 (398)
T ss_dssp             SEEEECCCHHHHHHHHHHTCCEEECCCT----TCCSSCTTHHHHHHHTSEEECCGGGCCHHHHHHHHHCHHHHHHHHHHH
T ss_pred             CEEEECCCHHHHHHHHHhCCCEEEcCCC----chhHHHHHHHHHHHCCCEEeeCCCCCCHHHHHHHHcCHHHHHHHHHHH
Confidence            9999999999999999999999999974    5799999  999999999865     3444553332110     1112


Q ss_pred             CCCCCCChh-HHHHHHHHhc
Q 042754          155 LPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       155 ~~~~~~~~~-~i~~~i~~~~  173 (178)
                      +.+...++. ++++.|++++
T Consensus       377 ~~~~~~~~~~~~~~~l~~l~  396 (398)
T 3oti_A          377 EEMVALPTPAETVRRIVERI  396 (398)
T ss_dssp             HHHHTSCCHHHHHHHHHHHH
T ss_pred             HHHHhCCCHHHHHHHHHHHh
Confidence            223333444 8888888765

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=99.79  E-value=4.2e-19  Score=147.68  Aligned_cols=154  Identities=21%  Similarity=0.253  Sum_probs=109.3

Q ss_pred             CCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhC-CCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhcc
Q 042754            9 SLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRR-GYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSAS   87 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~-~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~ad   87 (178)
                      +++++|+|++||.+ ....+.+  ..+++.+... ++ ++++++|.+.......   ..+.|+++.+|++++ ++|++||
T Consensus       230 ~~~~~v~v~~Gs~~-~~~~~~~--~~~~~~l~~~~~~-~~~~~~G~~~~~~~l~---~~~~~v~~~~~~~~~-~~l~~ad  301 (430)
T 2iyf_A          230 GAEKVVLVSLGSAF-TKQPAFY--RECVRAFGNLPGW-HLVLQIGRKVTPAELG---ELPDNVEVHDWVPQL-AILRQAD  301 (430)
T ss_dssp             TCSEEEEEECTTTC-C-CHHHH--HHHHHHHTTCTTE-EEEEECC---CGGGGC---SCCTTEEEESSCCHH-HHHTTCS
T ss_pred             CCCCeEEEEcCCCC-CCcHHHH--HHHHHHHhcCCCe-EEEEEeCCCCChHHhc---cCCCCeEEEecCCHH-HHhhccC
Confidence            45788999999986 2112222  2224556553 65 8888999764322111   134689999999987 8999999


Q ss_pred             EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCcc-----c----
Q 042754           88 LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDLE-----S----  153 (178)
Q Consensus        88 lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~~-----~----  153 (178)
                      ++|+|+|++|++|++++|+|+|++|..    +||..||+++++.|.|+.+     +++.|.++|.+++.+     +    
T Consensus       302 ~~v~~~G~~t~~Ea~~~G~P~i~~p~~----~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~  377 (430)
T 2iyf_A          302 LFVTHAGAGGSQEGLATATPMIAVPQA----VDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEVARRLRRI  377 (430)
T ss_dssp             EEEECCCHHHHHHHHHTTCCEEECCCS----HHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             EEEECCCccHHHHHHHhCCCEEECCCc----cchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            999999999999999999999999975    6899999999999999754     678899999887521     1    


Q ss_pred             CCCCCCCChh-HHHHHHHHhcC
Q 042754          154 LLPYQPGDAT-PVAKLINRFLG  174 (178)
Q Consensus       154 ~~~~~~~~~~-~i~~~i~~~~~  174 (178)
                      .+.+...++. ++++.|++++.
T Consensus       378 ~~~~~~~~~~~~~~~~i~~~~~  399 (430)
T 2iyf_A          378 QAEMAQEGGTRRAADLIEAELP  399 (430)
T ss_dssp             HHHHHHHCHHHHHHHHHHTTSC
T ss_pred             HHHHHhcCcHHHHHHHHHHHhh
Confidence            1112222444 88888877653

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=99.78  E-value=7.2e-19  Score=148.83  Aligned_cols=131  Identities=13%  Similarity=0.154  Sum_probs=101.1

Q ss_pred             CCCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccc-cccCCcceEEEEeChhhHHHHhhh
Q 042754            9 SLKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKS-LGEDGLMAVDYFTFSSSIADHLRS   85 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~-~~~~~~~nv~v~~~~~~~~~~~~~   85 (178)
                      +++++|+|++||.+.  ....+.+     +..|...++ ++++++|......... ...+.+.|+.+.+|+|+ ..++++
T Consensus       271 ~~~~vVyvsfGS~~~~~~~~~~el-----~~~l~~~~~-~flw~~~~~~~~~lp~~~~~~~~~~~~vv~w~Pq-~~vL~h  343 (454)
T 3hbf_A          271 ENSSVVYISFGSVVTPPPHELTAL-----AESLEECGF-PFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAPQ-VEILKH  343 (454)
T ss_dssp             CTTCEEEEECCSSCCCCHHHHHHH-----HHHHHHHCC-CEEEECCSCHHHHSCTTHHHHTTTTEEEESSCCH-HHHHHS
T ss_pred             CCCceEEEecCCCCcCCHHHHHHH-----HHHHHhCCC-eEEEEeCCcchhcCCHhHHhhcCCceEEEeeCCH-HHHHhh
Confidence            467999999999853  2222222     456666676 9999999864211110 00112458899999998 599999


Q ss_pred             cc--EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhC-CCEEE-----eChhhHHHHHHccC
Q 042754           86 AS--LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR-KHLYC-----AHPQSLHQVIAGMD  150 (178)
Q Consensus        86 ad--lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~-G~~~~-----~~~~~L~~~i~~l~  150 (178)
                      ++  ++|||||+||++|++++|+|+|++|..    .||..||+++++. |+|+.     .+.++|.++|++++
T Consensus       344 ~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~----~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll  412 (454)
T 3hbf_A          344 SSVGVFLTHSGWNSVLECIVGGVPMISRPFF----GDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTM  412 (454)
T ss_dssp             TTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHH
T ss_pred             cCcCeEEecCCcchHHHHHHcCCCEecCccc----ccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHH
Confidence            99  999999999999999999999999985    5899999999995 99985     37888999998885

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=99.78  E-value=6.3e-19  Score=145.44  Aligned_cols=153  Identities=19%  Similarity=0.206  Sum_probs=113.6

Q ss_pred             CCCCcEEEEEeCCcc--HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhh
Q 042754            8 VSLKRIVFVTVGTTC--FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRS   85 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~--~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~   85 (178)
                      .++++.|++++|+.+  ...++..+     ++.+...++ ++++++|........   ...+.|+.+.+|+ ++.++|+.
T Consensus       239 ~~~~~~vlv~~G~~~~~~~~~~~~~-----~~~l~~~~~-~~~~~~g~~~~~~~l---~~~~~~v~~~~~~-~~~~~l~~  308 (412)
T 3otg_A          239 DTARPLVYLTLGTSSGGTVEVLRAA-----IDGLAGLDA-DVLVASGPSLDVSGL---GEVPANVRLESWV-PQAALLPH  308 (412)
T ss_dssp             CTTSCEEEEECTTTTCSCHHHHHHH-----HHHHHTSSS-EEEEECCSSCCCTTC---CCCCTTEEEESCC-CHHHHGGG
T ss_pred             cCCCCEEEEEcCCCCcCcHHHHHHH-----HHHHHcCCC-EEEEEECCCCChhhh---ccCCCcEEEeCCC-CHHHHHhc
Confidence            456789999999873  22233332     456666675 899999976521111   1235689999999 69999999


Q ss_pred             ccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCcc--------
Q 042754           86 ASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDLE--------  152 (178)
Q Consensus        86 adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~~--------  152 (178)
                      ||++|+|+|++|++|++++|+|+|++|..    ++|..|++.+++.|.++.+     +++.|.++|.+++.+        
T Consensus       309 ad~~v~~~g~~t~~Ea~a~G~P~v~~p~~----~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~  384 (412)
T 3otg_A          309 VDLVVHHGGSGTTLGALGAGVPQLSFPWA----GDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGAR  384 (412)
T ss_dssp             CSEEEESCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             CcEEEECCchHHHHHHHHhCCCEEecCCc----hhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHH
Confidence            99999999999999999999999999976    5899999999999999764     678899999887521        


Q ss_pred             -cCCCCCCCChh-HHHHHHHHhcC
Q 042754          153 -SLLPYQPGDAT-PVAKLINRFLG  174 (178)
Q Consensus       153 -~~~~~~~~~~~-~i~~~i~~~~~  174 (178)
                       ..+.+...++. ++++.|++++.
T Consensus       385 ~~~~~~~~~~~~~~~~~~~~~l~~  408 (412)
T 3otg_A          385 AVAAEIAAMPGPDEVVRLLPGFAS  408 (412)
T ss_dssp             HHHHHHHHSCCHHHHHTTHHHHHC
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHhc
Confidence             11222223344 88888877653

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.78  E-value=5.8e-19  Score=145.04  Aligned_cols=151  Identities=21%  Similarity=0.199  Sum_probs=111.4

Q ss_pred             CCCCcEEEEEeCCccH-----HHHHHHhccHHHHHHHHhC-CCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHH
Q 042754            8 VSLKRIVFVTVGTTCF-----DALVKAVDTLEVKQELTRR-GYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIAD   81 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~~-----~~l~~~~~~~~~~~~l~~~-~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~   81 (178)
                      .++++.|+|++||.+.     ..+.+.+     ++. .+. ++ ++++++|+.......    ..+.|+++.+|++ +.+
T Consensus       215 ~~~~~~vlv~~G~~~~~~~~~~~~~~~~-----~~~-~~~p~~-~~v~~~~~~~~~~l~----~~~~~v~~~~~~~-~~~  282 (391)
T 3tsa_A          215 RTSARRVCICMGRMVLNATGPAPLLRAV-----AAA-TELPGV-EAVIAVPPEHRALLT----DLPDNARIAESVP-LNL  282 (391)
T ss_dssp             CCSSEEEEEECCHHHHHHHCSHHHHHHH-----HHH-HTSTTE-EEEEECCGGGGGGCT----TCCTTEEECCSCC-GGG
T ss_pred             CCCCCEEEEEcCCCCCcccchHHHHHHH-----HHh-ccCCCe-EEEEEECCcchhhcc----cCCCCEEEeccCC-HHH
Confidence            3567899999998732     3334443     444 555 65 899988876432221    2357899999997 478


Q ss_pred             HhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-------ChhhHHHHHHccCcc--
Q 042754           82 HLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-------HPQSLHQVIAGMDLE--  152 (178)
Q Consensus        82 ~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-------~~~~L~~~i~~l~~~--  152 (178)
                      +|+.||++|||||++|++|++++|+|+|++|..    .+|..|++++++.|+++.+       +++.|.+++.+++.+  
T Consensus       283 ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~----~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~  358 (391)
T 3tsa_A          283 FLRTCELVICAGGSGTAFTATRLGIPQLVLPQY----FDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTG  358 (391)
T ss_dssp             TGGGCSEEEECCCHHHHHHHHHTTCCEEECCCS----TTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTH
T ss_pred             HHhhCCEEEeCCCHHHHHHHHHhCCCEEecCCc----ccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHH
Confidence            999999999999999999999999999999874    5899999999999999764       367899999888522  


Q ss_pred             -------cCCCCCCCChh-HHHHHHHHhcC
Q 042754          153 -------SLLPYQPGDAT-PVAKLINRFLG  174 (178)
Q Consensus       153 -------~~~~~~~~~~~-~i~~~i~~~~~  174 (178)
                             ..+.+...++. ++++.|++++.
T Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  388 (391)
T 3tsa_A          359 FAAAAIKLSDEITAMPHPAALVRTLENTAA  388 (391)
T ss_dssp             HHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence                   11223333444 89998887764

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=99.75  E-value=7.3e-18  Score=143.47  Aligned_cols=130  Identities=17%  Similarity=0.150  Sum_probs=96.4

Q ss_pred             CCCcEEEEEeCCccH--HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccc----------ccccccCCcce-------
Q 042754            9 SLKRIVFVTVGTTCF--DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVP----------TKSLGEDGLMA-------   69 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~--~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~----------~~~~~~~~~~n-------   69 (178)
                      +++++|+|++||.+.  ....+.+     +..|...++ ++++++|......          .... ...+.|       
T Consensus       266 ~~~~vvyvs~GS~~~~~~~~~~~~-----~~al~~~~~-~~lw~~~~~~~~~~~~~~~~~~~~~~~-~~lp~~~~~~~~~  338 (480)
T 2vch_A          266 PLGSVLYVSFGSGGTLTCEQLNEL-----ALGLADSEQ-RFLWVIRSPSGIANSSYFDSHSQTDPL-TFLPPGFLERTKK  338 (480)
T ss_dssp             CTTCEEEEECTTTCCCCHHHHHHH-----HHHHHHTTC-EEEEEECCCCSSTTTTTTCC--CSCGG-GGSCTTHHHHTTT
T ss_pred             CCCceEEEecccccCCCHHHHHHH-----HHHHHhcCC-cEEEEECCccccccccccccccccchh-hhcCHHHHHHhCC
Confidence            357899999999742  2233333     566777786 9999998743100          0000 012233       


Q ss_pred             --EEEEeChhhHHHHhhhcc--EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHH-HhCCCEEE--------
Q 042754           70 --VDYFTFSSSIADHLRSAS--LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEEL-AARKHLYC--------  136 (178)
Q Consensus        70 --v~v~~~~~~~~~~~~~ad--lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l-~~~G~~~~--------  136 (178)
                        +.+.+|+|++ ++|++++  ++|||||+||++|++++|||+|++|..    .||..||+++ ++.|+|+.        
T Consensus       339 ~g~~v~~w~Pq~-~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~----~DQ~~na~~l~~~~G~g~~l~~~~~~~  413 (480)
T 2vch_A          339 RGFVIPFWAPQA-QVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLY----AEQKMNAVLLSEDIRAALRPRAGDDGL  413 (480)
T ss_dssp             TEEEEESCCCHH-HHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHTTCCEECCCCCTTSC
T ss_pred             CeEEEeCccCHH-HHhCCCCcCeEEecccchhHHHHHHcCCCEEecccc----ccchHHHHHHHHHhCeEEEeecccCCc
Confidence              4555699985 9998888  899999999999999999999999985    5899999998 68999973        


Q ss_pred             eChhhHHHHHHccC
Q 042754          137 AHPQSLHQVIAGMD  150 (178)
Q Consensus       137 ~~~~~L~~~i~~l~  150 (178)
                      .+.++|.++|++++
T Consensus       414 ~~~~~l~~av~~vl  427 (480)
T 2vch_A          414 VRREEVARVVKGLM  427 (480)
T ss_dssp             CCHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHh
Confidence            36788999998885

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=99.63  E-value=3.2e-15  Score=121.17  Aligned_cols=160  Identities=20%  Similarity=0.170  Sum_probs=112.6

Q ss_pred             CCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccC-CcceEEEEeChhhHHHHhhhcc
Q 042754            9 SLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGED-GLMAVDYFTFSSSIADHLRSAS   87 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~-~~~nv~v~~~~~~~~~~~~~ad   87 (178)
                      ++++.+++++|+.+.....+.+  .+++..+.+ ++ ++++++|............. ...+|.+.+|++++..+|+.||
T Consensus       181 ~~~~~il~~~g~~~~~k~~~~l--i~a~~~l~~-~~-~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad  256 (364)
T 1f0k_A          181 EGPVRVLVVGGSQGARILNQTM--PQVAAKLGD-SV-TIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWAD  256 (364)
T ss_dssp             CSSEEEEEECTTTCCHHHHHHH--HHHHHHHGG-GE-EEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCS
T ss_pred             CCCcEEEEEcCchHhHHHHHHH--HHHHHHhcC-Cc-EEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHHHhCC
Confidence            3567788899987544333443  223444443 54 77888998763221110000 1147999999988999999999


Q ss_pred             EEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C--hhhHHHHHHccC-------cccCC
Q 042754           88 LVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---H--PQSLHQVIAGMD-------LESLL  155 (178)
Q Consensus        88 lvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~--~~~L~~~i~~l~-------~~~~~  155 (178)
                      ++|+++|.+|+.|++++|+|+|+.|.... ++||..|++.+.+.|.|+..   +  ++.|.++|.++.       ..+.+
T Consensus       257 ~~v~~sg~~~~~EAma~G~Pvi~~~~~g~-~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l~~~~~~~~~~~~~  335 (364)
T 1f0k_A          257 VVVCRSGALTVSEIAAAGLPALFVPFQHK-DRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERAR  335 (364)
T ss_dssp             EEEECCCHHHHHHHHHHTCCEEECCCCCT-TCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred             EEEECCchHHHHHHHHhCCCEEEeeCCCC-chhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            99999999999999999999999987643 57899999999999998764   2  678999998771       11222


Q ss_pred             CCCCCChh-HHHHHHHHhc
Q 042754          156 PYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       156 ~~~~~~~~-~i~~~i~~~~  173 (178)
                      .+....+. ++++.+++..
T Consensus       336 ~~~~~~~~~~~~~~~~~~y  354 (364)
T 1f0k_A          336 AASIPDATERVANEVSRVA  354 (364)
T ss_dssp             HTCCTTHHHHHHHHHHHHH
T ss_pred             HhhccCHHHHHHHHHHHHH
Confidence            33344555 8888877664

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=99.32  E-value=1.2e-11  Score=102.94  Aligned_cols=151  Identities=17%  Similarity=0.197  Sum_probs=103.6

Q ss_pred             CCCcEEEEEeCCc---c--HHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccc-ccccCCcceEEEEeChh--h
Q 042754            9 SLKRIVFVTVGTT---C--FDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTK-SLGEDGLMAVDYFTFSS--S   78 (178)
Q Consensus         9 ~~~~~ilVt~Gs~---~--~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~-~~~~~~~~nv~v~~~~~--~   78 (178)
                      ++++.+++++|..   +  ...+.+++      ..+.+  .++ ++++.+|++...... ........++.+.++..  +
T Consensus       222 ~~~~~vlv~~~r~~~~~~~l~~ll~a~------~~l~~~~~~~-~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~  294 (403)
T 3ot5_A          222 GDNRLILMTAHRRENLGEPMQGMFEAV------REIVESREDT-ELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAID  294 (403)
T ss_dssp             TTCEEEEECCCCHHHHTTHHHHHHHHH------HHHHHHCTTE-EEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred             cCCCEEEEEeCcccccCcHHHHHHHHH------HHHHHhCCCc-eEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHH
Confidence            3567888887742   2  23333333      33332  354 788888876311111 01001235899999875  7


Q ss_pred             HHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChhhHHHHHHccC------
Q 042754           79 IADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA--HPQSLHQVIAGMD------  150 (178)
Q Consensus        79 ~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~--~~~~L~~~i~~l~------  150 (178)
                      |..+|+.||++|+.+|+.+ .|+.++|+|+|++|..   .++|+     +.+.|.++.+  ++++|.+++.+++      
T Consensus       295 ~~~l~~~ad~vv~~SGg~~-~EA~a~g~PvV~~~~~---~~~~e-----~v~~g~~~lv~~d~~~l~~ai~~ll~~~~~~  365 (403)
T 3ot5_A          295 FHNFLRKSYLVFTDSGGVQ-EEAPGMGVPVLVLRDT---TERPE-----GIEAGTLKLIGTNKENLIKEALDLLDNKESH  365 (403)
T ss_dssp             HHHHHHHEEEEEECCHHHH-HHGGGTTCCEEECCSS---CSCHH-----HHHHTSEEECCSCHHHHHHHHHHHHHCHHHH
T ss_pred             HHHHHHhcCEEEECCccHH-HHHHHhCCCEEEecCC---Ccchh-----heeCCcEEEcCCCHHHHHHHHHHHHcCHHHH
Confidence            9999999999999997555 8999999999998643   24564     2466777643  7899999998874      


Q ss_pred             ---cccCCCCCCCChh-HHHHHHHHhcCC
Q 042754          151 ---LESLLPYQPGDAT-PVAKLINRFLGF  175 (178)
Q Consensus       151 ---~~~~~~~~~~~~~-~i~~~i~~~~~~  175 (178)
                         ....++|..++++ +|++.|.+.++.
T Consensus       366 ~~m~~~~~~~g~~~aa~rI~~~l~~~l~~  394 (403)
T 3ot5_A          366 DKMAQAANPYGDGFAANRILAAIKSHFEE  394 (403)
T ss_dssp             HHHHHSCCTTCCSCHHHHHHHHHHHHHTC
T ss_pred             HHHHhhcCcccCCcHHHHHHHHHHHHhCC
Confidence               2345788888988 999999999876

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=99.24  E-value=4.4e-11  Score=99.21  Aligned_cols=147  Identities=16%  Similarity=0.238  Sum_probs=97.2

Q ss_pred             CCCcEEEEEe---CCcc--HHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccc-ccccCCcceEEEEeCh--hh
Q 042754            9 SLKRIVFVTV---GTTC--FDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTK-SLGEDGLMAVDYFTFS--SS   78 (178)
Q Consensus         9 ~~~~~ilVt~---Gs~~--~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~-~~~~~~~~nv~v~~~~--~~   78 (178)
                      ++++.+|+++   |+.+  .+.+.++      +..+.+  .++ ++++.+|.+...... ........++.+.++.  .+
T Consensus       228 ~~~~~vlv~~hR~~~~~~~~~~ll~A------~~~l~~~~~~~-~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~  300 (396)
T 3dzc_A          228 ASKKLILVTGHRRESFGGGFERICQA------LITTAEQHPEC-QILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLP  300 (396)
T ss_dssp             TTSEEEEEECSCBCCCTTHHHHHHHH------HHHHHHHCTTE-EEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHH
T ss_pred             CCCCEEEEEECCcccchhHHHHHHHH------HHHHHHhCCCc-eEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHH
Confidence            4578888888   4443  2333333      334433  355 788888865311111 0000123578887776  46


Q ss_pred             HHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChhhHHHHHHccC------
Q 042754           79 IADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA--HPQSLHQVIAGMD------  150 (178)
Q Consensus        79 ~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~--~~~~L~~~i~~l~------  150 (178)
                      |..+|+.||++|+.+| |.+.|+.++|+|+|+.....   +.|     .+.+.|.++..  ++++|.+++.+++      
T Consensus       301 ~~~l~~~ad~vv~~SG-g~~~EA~a~G~PvV~~~~~~---~~~-----e~v~~G~~~lv~~d~~~l~~ai~~ll~d~~~~  371 (396)
T 3dzc_A          301 FVYLMDRAHIILTDSG-GIQEEAPSLGKPVLVMRETT---ERP-----EAVAAGTVKLVGTNQQQICDALSLLLTDPQAY  371 (396)
T ss_dssp             HHHHHHHCSEEEESCS-GGGTTGGGGTCCEEECCSSC---SCH-----HHHHHTSEEECTTCHHHHHHHHHHHHHCHHHH
T ss_pred             HHHHHHhcCEEEECCc-cHHHHHHHcCCCEEEccCCC---cch-----HHHHcCceEEcCCCHHHHHHHHHHHHcCHHHH
Confidence            8899999999999998 55589999999999864321   222     24566777654  5888999998874      


Q ss_pred             ---cccCCCCCCCChh-HHHHHHHH
Q 042754          151 ---LESLLPYQPGDAT-PVAKLINR  171 (178)
Q Consensus       151 ---~~~~~~~~~~~~~-~i~~~i~~  171 (178)
                         ..+.++|..++++ +|++.|++
T Consensus       372 ~~m~~~~~~~~~~~aa~ri~~~l~~  396 (396)
T 3dzc_A          372 QAMSQAHNPYGDGKACQRIADILAK  396 (396)
T ss_dssp             HHHHTSCCTTCCSCHHHHHHHHHHC
T ss_pred             HHHhhccCCCcCChHHHHHHHHHhC
Confidence               2346788888988 99998864

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=99.16  E-value=3.7e-10  Score=91.75  Aligned_cols=150  Identities=20%  Similarity=0.239  Sum_probs=98.4

Q ss_pred             CCcEEEEEeCC---c-cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccc-ccccCCcceEEEE---eChhhH
Q 042754           10 LKRIVFVTVGT---T-CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTK-SLGEDGLMAVDYF---TFSSSI   79 (178)
Q Consensus        10 ~~~~ilVt~Gs---~-~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~-~~~~~~~~nv~v~---~~~~~~   79 (178)
                      +++.+++++|.   . +...+.+++      ..+.+  .++ ++++.+|.+...... ........++.+.   +|. ++
T Consensus       197 ~~~~vl~~~gr~~~~k~~~~ll~a~------~~l~~~~~~~-~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~-~~  268 (376)
T 1v4v_A          197 EGPYVTVTMHRRENWPLLSDLAQAL------KRVAEAFPHL-TFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYG-SM  268 (376)
T ss_dssp             SSCEEEECCCCGGGGGGHHHHHHHH------HHHHHHCTTS-EEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHH-HH
T ss_pred             CCCEEEEEeCcccchHHHHHHHHHH------HHHHhhCCCe-EEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHH-HH
Confidence            46778888884   3 344555544      23322  245 777777865311111 0000112478888   565 78


Q ss_pred             HHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChhhHHHHHHccCc------
Q 042754           80 ADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC--AHPQSLHQVIAGMDL------  151 (178)
Q Consensus        80 ~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~--~~~~~L~~~i~~l~~------  151 (178)
                      ..+|+.||++|+.+| |.+.|++++|+|+|+.+..   .+.+.     +.+.|.++.  .+++.|.+++.+++.      
T Consensus       269 ~~~~~~ad~~v~~S~-g~~lEA~a~G~PvI~~~~~---~~~~~-----~~~~g~g~lv~~d~~~la~~i~~ll~d~~~~~  339 (376)
T 1v4v_A          269 AALMRASLLLVTDSG-GLQEEGAALGVPVVVLRNV---TERPE-----GLKAGILKLAGTDPEGVYRVVKGLLENPEELS  339 (376)
T ss_dssp             HHHHHTEEEEEESCH-HHHHHHHHTTCCEEECSSS---CSCHH-----HHHHTSEEECCSCHHHHHHHHHHHHTCHHHHH
T ss_pred             HHHHHhCcEEEECCc-CHHHHHHHcCCCEEeccCC---Ccchh-----hhcCCceEECCCCHHHHHHHHHHHHhChHhhh
Confidence            999999999999985 5577999999999987653   23333     234566654  488999999988742      


Q ss_pred             ---ccCCCCCCCChh-HHHHHHHHhcCCC
Q 042754          152 ---ESLLPYQPGDAT-PVAKLINRFLGFP  176 (178)
Q Consensus       152 ---~~~~~~~~~~~~-~i~~~i~~~~~~~  176 (178)
                         .+.+.|...+++ ++++.+.+.++.+
T Consensus       340 ~~~~~~~~~~~~~~~~~i~~~i~~~~~~~  368 (376)
T 1v4v_A          340 RMRKAKNPYGDGKAGLMVARGVAWRLGLG  368 (376)
T ss_dssp             HHHHSCCSSCCSCHHHHHHHHHHHHTTSS
T ss_pred             hhcccCCCCCCChHHHHHHHHHHHHhccc
Confidence               234567666777 9999999988643

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=99.14  E-value=1.6e-10  Score=95.62  Aligned_cols=152  Identities=13%  Similarity=0.162  Sum_probs=96.5

Q ss_pred             CcEEEEEeCCc---cHHHHHHHhccHHHHHHHHh-CCCCeEEEEEeCCCccccccc-c-cCCcceEEEEeChh--hHHHH
Q 042754           11 KRIVFVTVGTT---CFDALVKAVDTLEVKQELTR-RGYTHLLIQMGRGTYVPTKSL-G-EDGLMAVDYFTFSS--SIADH   82 (178)
Q Consensus        11 ~~~ilVt~Gs~---~~~~l~~~~~~~~~~~~l~~-~~~~~vvv~~G~~~~~~~~~~-~-~~~~~nv~v~~~~~--~~~~~   82 (178)
                      ++.+|+|+|..   +....++.+  .+++..+.+ .++ ++++.+++......... . .....++.+.+...  +|..+
T Consensus       203 ~~~iLvt~hr~e~~~~~~~l~~l--l~al~~l~~~~~~-~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l  279 (385)
T 4hwg_A          203 KQYFLISSHREENVDVKNNLKEL--LNSLQMLIKEYNF-LIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKL  279 (385)
T ss_dssp             TSEEEEEECCC-----CHHHHHH--HHHHHHHHHHHCC-EEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHH
T ss_pred             CCEEEEEeCCchhcCcHHHHHHH--HHHHHHHHhcCCe-EEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHH
Confidence            57899998853   211222222  122334432 255 78887775421111111 0 11235788765432  58899


Q ss_pred             hhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChhhHHHHHHccCcc--------
Q 042754           83 LRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA--HPQSLHQVIAGMDLE--------  152 (178)
Q Consensus        83 ~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~--~~~~L~~~i~~l~~~--------  152 (178)
                      |+.||++||.+|+ .+.|+.++|+|+|+++...   +.|+     ..+.|.++.+  ++++|.+++.+++.+        
T Consensus       280 ~~~adlvvt~SGg-v~~EA~alG~Pvv~~~~~t---er~e-----~v~~G~~~lv~~d~~~i~~ai~~ll~d~~~~~~m~  350 (385)
T 4hwg_A          280 QMNAFCILSDSGT-ITEEASILNLPALNIREAH---ERPE-----GMDAGTLIMSGFKAERVLQAVKTITEEHDNNKRTQ  350 (385)
T ss_dssp             HHHCSEEEECCTT-HHHHHHHTTCCEEECSSSC---SCTH-----HHHHTCCEECCSSHHHHHHHHHHHHTTCBTTBCCS
T ss_pred             HHhCcEEEECCcc-HHHHHHHcCCCEEEcCCCc---cchh-----hhhcCceEEcCCCHHHHHHHHHHHHhChHHHHHhh
Confidence            9999999999996 5699999999999987532   1243     2456766543  789999999887521        


Q ss_pred             -cCCCC-CCCChh-HHHHHHHHhcC
Q 042754          153 -SLLPY-QPGDAT-PVAKLINRFLG  174 (178)
Q Consensus       153 -~~~~~-~~~~~~-~i~~~i~~~~~  174 (178)
                       ...+| .+++++ +|++.|.+.++
T Consensus       351 ~~~~~~~g~g~aa~rI~~~l~~~~~  375 (385)
T 4hwg_A          351 GLVPDYNEAGLVSKKILRIVLSYVD  375 (385)
T ss_dssp             CCCHHHHTCCCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCChHHHHHHHHHHHHhh
Confidence             23467 888888 99999988764

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=99.01  E-value=1.3e-09  Score=88.57  Aligned_cols=150  Identities=15%  Similarity=0.179  Sum_probs=95.1

Q ss_pred             CCCcEEEEEeCCc-----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCcccccc-cccCCcceEEEEeCh--hh
Q 042754            9 SLKRIVFVTVGTT-----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTKS-LGEDGLMAVDYFTFS--SS   78 (178)
Q Consensus         9 ~~~~~ilVt~Gs~-----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~~-~~~~~~~nv~v~~~~--~~   78 (178)
                      ++++.+++++|..     |...+++++      ..+.+  .++ ++++.+|.+....... .......+|.+.+++  .+
T Consensus       203 ~~~~~vl~~~gr~~~~~kg~~~li~a~------~~l~~~~~~~-~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~  275 (384)
T 1vgv_A          203 PDKKMILVTGHRRESFGRGFEEICHAL------ADIATTHQDI-QIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLP  275 (384)
T ss_dssp             TTSEEEEEECCCBSSCCHHHHHHHHHH------HHHHHHCTTE-EEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred             CCCCEEEEEeCCccccchHHHHHHHHH------HHHHhhCCCe-EEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHH
Confidence            3567889999943     234455554      23322  244 7777677542111110 000112478884332  57


Q ss_pred             HHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChhhHHHHHHccC------
Q 042754           79 IADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA--HPQSLHQVIAGMD------  150 (178)
Q Consensus        79 ~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~--~~~~L~~~i~~l~------  150 (178)
                      +.++|+.||++|+.+| +++.|++++|+|+|+.+...   +.+ +    +.+.|.++..  +++.|.++|.+++      
T Consensus       276 ~~~~~~~ad~~v~~Sg-~~~lEA~a~G~PvI~~~~~~---~~~-e----~v~~g~g~lv~~d~~~la~~i~~ll~d~~~~  346 (384)
T 1vgv_A          276 FVWLMNHAWLILTDSG-GIQEEAPSLGKPVLVMRDTT---ERP-E----AVTAGTVRLVGTDKQRIVEEVTRLLKDENEY  346 (384)
T ss_dssp             HHHHHHHCSEEEESSS-TGGGTGGGGTCCEEEESSCC---SCH-H----HHHHTSEEEECSSHHHHHHHHHHHHHCHHHH
T ss_pred             HHHHHHhCcEEEECCc-chHHHHHHcCCCEEEccCCC---Ccc-h----hhhCCceEEeCCCHHHHHHHHHHHHhChHHH
Confidence            9999999999999997 45899999999999987631   212 1    2344666544  7889999988874      


Q ss_pred             ---cccCCCCCCCChh-HHHHHHHHhcC
Q 042754          151 ---LESLLPYQPGDAT-PVAKLINRFLG  174 (178)
Q Consensus       151 ---~~~~~~~~~~~~~-~i~~~i~~~~~  174 (178)
                         ..+.+.+....++ ++++.+++++.
T Consensus       347 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~  374 (384)
T 1vgv_A          347 QAMSRAHNPYGDGQACSRILEALKNNRI  374 (384)
T ss_dssp             HHHHSSCCTTCCSCHHHHHHHHHHHTCC
T ss_pred             hhhhhccCCCcCCCHHHHHHHHHHHHHH
Confidence               1244556666677 99999888754

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=98.78  E-value=1.4e-07  Score=76.09  Aligned_cols=149  Identities=13%  Similarity=0.188  Sum_probs=91.3

Q ss_pred             CCcEEEEEeCCcc-----HHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccc-ccccCCcceEEEEeChh--hH
Q 042754           10 LKRIVFVTVGTTC-----FDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTK-SLGEDGLMAVDYFTFSS--SI   79 (178)
Q Consensus        10 ~~~~ilVt~Gs~~-----~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~-~~~~~~~~nv~v~~~~~--~~   79 (178)
                      +++.+++++|...     ...+++++      ..+.+  .++ ++++..|++...... ........+|.+.++++  ++
T Consensus       204 ~~~~vl~~~gr~~~~~K~~~~li~a~------~~l~~~~~~~-~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~  276 (375)
T 3beo_A          204 NNRLVLMTAHRRENLGEPMRNMFRAI------KRLVDKHEDV-QVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDF  276 (375)
T ss_dssp             TSEEEEEECCCGGGTTHHHHHHHHHH------HHHHHHCTTE-EEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred             CCCeEEEEecccccchhHHHHHHHHH------HHHHhhCCCe-EEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHH
Confidence            4567888888642     23333333      33332  244 655544432100111 00001125788855542  68


Q ss_pred             HHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe--ChhhHHHHHHccCc------
Q 042754           80 ADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA--HPQSLHQVIAGMDL------  151 (178)
Q Consensus        80 ~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~--~~~~L~~~i~~l~~------  151 (178)
                      ..+|+.||++|+.+| +++.|++++|+|+|+.+...   +.++     +.+.|.++..  +++.|.++|.++..      
T Consensus       277 ~~~~~~ad~~v~~sg-~~~lEA~a~G~Pvi~~~~~~---~~~e-----~v~~g~g~~v~~d~~~la~~i~~ll~~~~~~~  347 (375)
T 3beo_A          277 HNVAARSYLMLTDSG-GVQEEAPSLGVPVLVLRDTT---ERPE-----GIEAGTLKLAGTDEETIFSLADELLSDKEAHD  347 (375)
T ss_dssp             HHHHHTCSEEEECCH-HHHHHHHHHTCCEEECSSCC---SCHH-----HHHTTSEEECCSCHHHHHHHHHHHHHCHHHHH
T ss_pred             HHHHHhCcEEEECCC-ChHHHHHhcCCCEEEecCCC---CCce-----eecCCceEEcCCCHHHHHHHHHHHHhChHhHh
Confidence            999999999999885 67999999999999874321   2222     3455666643  78899999888741      


Q ss_pred             ---ccCCCCCCCChh-HHHHHHHHhcC
Q 042754          152 ---ESLLPYQPGDAT-PVAKLINRFLG  174 (178)
Q Consensus       152 ---~~~~~~~~~~~~-~i~~~i~~~~~  174 (178)
                         .+.+.+....++ ++++.++++++
T Consensus       348 ~~~~~~~~~~~~~~~~~i~~~~~~~~~  374 (375)
T 3beo_A          348 KMSKASNPYGDGRASERIVEAILKHFN  374 (375)
T ss_dssp             HHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred             hhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence               234555555666 99999988765

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=98.54  E-value=5.7e-07  Score=65.77  Aligned_cols=77  Identities=17%  Similarity=0.200  Sum_probs=59.3

Q ss_pred             cceEEEEeChhh--HHHHhhhccEEEe----cCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eC
Q 042754           67 LMAVDYFTFSSS--IADHLRSASLVIS----HAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC--AH  138 (178)
Q Consensus        67 ~~nv~v~~~~~~--~~~~~~~adlvIs----haG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~--~~  138 (178)
                      ..+|++.+|+++  +..+|+.||++|.    -+...++.|++++|+|+|+...        ..+.+.+.+.+.++.  .+
T Consensus        77 ~~~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~--------~~~~e~i~~~~~g~~~~~d  148 (177)
T 2f9f_A           77 PDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNE--------GGFKETVINEKTGYLVNAD  148 (177)
T ss_dssp             CTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESS--------HHHHHHCCBTTTEEEECSC
T ss_pred             CCcEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCC--------CCHHHHhcCCCccEEeCCC
Confidence            358999999976  9999999999997    2345699999999999997543        235555655555554  47


Q ss_pred             hhhHHHHHHccCc
Q 042754          139 PQSLHQVIAGMDL  151 (178)
Q Consensus       139 ~~~L~~~i~~l~~  151 (178)
                      ++.+.++|.++..
T Consensus       149 ~~~l~~~i~~l~~  161 (177)
T 2f9f_A          149 VNEIIDAMKKVSK  161 (177)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            8899999998863

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=98.39  E-value=1.6e-06  Score=69.64  Aligned_cols=125  Identities=15%  Similarity=0.209  Sum_probs=80.2

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh---CCCCeEEEEEeCCCcccccc--cccCCcceEEEEeChhhHH
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTR---RGYTHLLIQMGRGTYVPTKS--LGEDGLMAVDYFTFSSSIA   80 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~---~~~~~vvv~~G~~~~~~~~~--~~~~~~~nv~v~~~~~~~~   80 (178)
                      +.+.++++.|+.    +...+.+++      ..+..   .++ + ++++|.........  .......+|++.++.+++.
T Consensus       194 ~~~~~i~~~G~~~~~K~~~~li~a~------~~l~~~~~~~~-~-l~i~G~g~~~~~~~~~~~~~~~~~v~~~g~~~~~~  265 (374)
T 2iw1_A          194 EQQNLLLQVGSDFGRKGVDRSIEAL------ASLPESLRHNT-L-LFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVS  265 (374)
T ss_dssp             TTCEEEEEECSCTTTTTHHHHHHHH------HTSCHHHHHTE-E-EEEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHH
T ss_pred             CCCeEEEEeccchhhcCHHHHHHHH------HHhHhccCCce-E-EEEEcCCCHHHHHHHHHHcCCCCcEEECCCcccHH
Confidence            345677777764    445555554      12211   233 4 45567644211110  0012246899999988999


Q ss_pred             HHhhhccEEEe----cCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe----ChhhHHHHHHccC
Q 042754           81 DHLRSASLVIS----HAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA----HPQSLHQVIAGMD  150 (178)
Q Consensus        81 ~~~~~adlvIs----haG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~----~~~~L~~~i~~l~  150 (178)
                      .+|+.||++|.    -+..+++.|++++|+|+|+.....        +.+.+.+.+.|+..    +++++.++|.++.
T Consensus       266 ~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~--------~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~  335 (374)
T 2iw1_A          266 ELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCG--------YAHYIADANCGTVIAEPFSQEQLNEVLRKAL  335 (374)
T ss_dssp             HHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTST--------TTHHHHHHTCEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCC--------chhhhccCCceEEeCCCCCHHHHHHHHHHHH
Confidence            99999999997    446789999999999999865431        23455555556532    6788999988874

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=98.36  E-value=2e-06  Score=69.42  Aligned_cols=123  Identities=17%  Similarity=0.205  Sum_probs=79.2

Q ss_pred             CcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccc-ccccCCcceEEEEeCh--hhHHH
Q 042754           11 KRIVFVTVGTT----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTK-SLGEDGLMAVDYFTFS--SSIAD   81 (178)
Q Consensus        11 ~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~-~~~~~~~~nv~v~~~~--~~~~~   81 (178)
                      .+.++++.|+.    |...+++++      ..+..  .++ ++ +++|........ ........++.+.+|+  +++..
T Consensus       197 ~~~~i~~~G~~~~~Kg~~~li~a~------~~l~~~~~~~-~l-~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~  268 (394)
T 3okp_A          197 TTPVIACNSRLVPRKGQDSLIKAM------PQVIAARPDA-QL-LIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMIN  268 (394)
T ss_dssp             TCCEEEEESCSCGGGCHHHHHHHH------HHHHHHSTTC-EE-EEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHH
T ss_pred             CceEEEEEeccccccCHHHHHHHH------HHHHhhCCCe-EE-EEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHH
Confidence            34667777864    555666655      23322  244 55 456654432111 1001234689999999  67999


Q ss_pred             HhhhccEEEe-----------cCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHH
Q 042754           82 HLRSASLVIS-----------HAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIA  147 (178)
Q Consensus        82 ~~~~adlvIs-----------haG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~  147 (178)
                      +|+.||++|.           -+...++.|++++|+|+|+-+...        ..+.+.+ |.++..   ++++|.++|.
T Consensus       269 ~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~--------~~e~i~~-~~g~~~~~~d~~~l~~~i~  339 (394)
T 3okp_A          269 TLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG--------APETVTP-ATGLVVEGSDVDKLSELLI  339 (394)
T ss_dssp             HHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT--------GGGGCCT-TTEEECCTTCHHHHHHHHH
T ss_pred             HHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC--------hHHHHhc-CCceEeCCCCHHHHHHHHH
Confidence            9999999998           666789999999999999855432        1122223 355543   7889999998


Q ss_pred             ccC
Q 042754          148 GMD  150 (178)
Q Consensus       148 ~l~  150 (178)
                      ++.
T Consensus       340 ~l~  342 (394)
T 3okp_A          340 ELL  342 (394)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=98.22  E-value=1.2e-05  Score=65.99  Aligned_cols=76  Identities=16%  Similarity=0.160  Sum_probs=58.3

Q ss_pred             cceEEEEeCh--hhHHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---
Q 042754           67 LMAVDYFTFS--SSIADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---  137 (178)
Q Consensus        67 ~~nv~v~~~~--~~~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---  137 (178)
                      ..+|.+.+|+  +++..+|+.||++|.-.    ...++.|++++|+|+|+.+..        ...+.+.+.+.++..   
T Consensus       305 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~--------~~~e~i~~~~~g~~~~~~  376 (438)
T 3c48_A          305 EKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVG--------GLPIAVAEGETGLLVDGH  376 (438)
T ss_dssp             TTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCT--------THHHHSCBTTTEEEESSC
T ss_pred             CCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCC--------ChhHHhhCCCcEEECCCC
Confidence            3589999998  57999999999999764    257999999999999986543        234455555556543   


Q ss_pred             ChhhHHHHHHccC
Q 042754          138 HPQSLHQVIAGMD  150 (178)
Q Consensus       138 ~~~~L~~~i~~l~  150 (178)
                      +++.|.++|.++.
T Consensus       377 d~~~la~~i~~l~  389 (438)
T 3c48_A          377 SPHAWADALATLL  389 (438)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHH
Confidence            6888999998874

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=98.21  E-value=1.3e-05  Score=65.58  Aligned_cols=76  Identities=12%  Similarity=0.123  Sum_probs=59.0

Q ss_pred             cceEEEEeChh-----hHHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe
Q 042754           67 LMAVDYFTFSS-----SIADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA  137 (178)
Q Consensus        67 ~~nv~v~~~~~-----~~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~  137 (178)
                      ..+|++.+|++     ++..+|+.||++|.-+    ...++.|++++|+|+|..+..        .+.+.+.+.+.++..
T Consensus       292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~--------g~~e~i~~~~~g~l~  363 (416)
T 2x6q_A          292 DYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVG--------GIKFQIVDGETGFLV  363 (416)
T ss_dssp             CTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCH--------HHHHHCCBTTTEEEE
T ss_pred             CCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCC--------CChhheecCCCeEEE
Confidence            35899999875     7999999999999876    458999999999999975432        355556555556533


Q ss_pred             -ChhhHHHHHHccC
Q 042754          138 -HPQSLHQVIAGMD  150 (178)
Q Consensus       138 -~~~~L~~~i~~l~  150 (178)
                       +++.|.++|.++.
T Consensus       364 ~d~~~la~~i~~ll  377 (416)
T 2x6q_A          364 RDANEAVEVVLYLL  377 (416)
T ss_dssp             SSHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH
Confidence             7889999998874

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=98.20  E-value=2.5e-06  Score=62.87  Aligned_cols=74  Identities=16%  Similarity=0.062  Sum_probs=55.8

Q ss_pred             eEEE-EeChh--hHHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C
Q 042754           69 AVDY-FTFSS--SIADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---H  138 (178)
Q Consensus        69 nv~v-~~~~~--~~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~  138 (178)
                      +|++ .++++  ++..+|+.||++|.-.    ...++.|++++|+|+|+....        ...+.+ +.+.++..   +
T Consensus        96 ~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~--------~~~e~~-~~~~g~~~~~~~  166 (200)
T 2bfw_A           96 NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG--------GLRDII-TNETGILVKAGD  166 (200)
T ss_dssp             TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCH--------HHHHHC-CTTTCEEECTTC
T ss_pred             CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCC--------ChHHHc-CCCceEEecCCC
Confidence            8999 99997  7999999999999754    247899999999998875321        344555 44445433   7


Q ss_pred             hhhHHHHHHccCc
Q 042754          139 PQSLHQVIAGMDL  151 (178)
Q Consensus       139 ~~~L~~~i~~l~~  151 (178)
                      ++.+.++|.++..
T Consensus       167 ~~~l~~~i~~l~~  179 (200)
T 2bfw_A          167 PGELANAILKALE  179 (200)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            8889999888753

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=98.19  E-value=1.1e-05  Score=65.41  Aligned_cols=122  Identities=14%  Similarity=0.154  Sum_probs=78.1

Q ss_pred             EEEEEeCCc-----cHHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCcccccccccCCcceEEEEeChhh--HHHHh
Q 042754           13 IVFVTVGTT-----CFDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSS--IADHL   83 (178)
Q Consensus        13 ~ilVt~Gs~-----~~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~--~~~~~   83 (178)
                      .++++.|+.     |...+++++      ..+..  .++ ++ +++|................+|.+.+|+++  +..+|
T Consensus       209 ~~i~~~G~~~~~~Kg~~~li~a~------~~l~~~~~~~-~l-~i~G~~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~  280 (406)
T 2gek_A          209 RTVLFLGRYDEPRKGMAVLLAAL------PKLVARFPDV-EI-LIVGRGDEDELREQAGDLAGHLRFLGQVDDATKASAM  280 (406)
T ss_dssp             CEEEEESCTTSGGGCHHHHHHHH------HHHHTTSTTC-EE-EEESCSCHHHHHHHTGGGGGGEEECCSCCHHHHHHHH
T ss_pred             eEEEEEeeeCccccCHHHHHHHH------HHHHHHCCCe-EE-EEEcCCcHHHHHHHHHhccCcEEEEecCCHHHHHHHH
Confidence            467777765     444555544      33433  233 44 456765431111111111468999999965  59999


Q ss_pred             hhccEEEecCC-----hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE---eChhhHHHHHHccC
Q 042754           84 RSASLVISHAG-----SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC---AHPQSLHQVIAGMD  150 (178)
Q Consensus        84 ~~adlvIshaG-----~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~---~~~~~L~~~i~~l~  150 (178)
                      +.||++|.-+.     ..++.|++++|+|+|+.+.        ....+.+.+...++.   .+++++.++|.++.
T Consensus       281 ~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~--------~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~  347 (406)
T 2gek_A          281 RSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL--------DAFRRVLADGDAGRLVPVDDADGMAAALIGIL  347 (406)
T ss_dssp             HHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC--------HHHHHHHTTTTSSEECCTTCHHHHHHHHHHHH
T ss_pred             HHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC--------CcHHHHhcCCCceEEeCCCCHHHHHHHHHHHH
Confidence            99999997653     5799999999999997543        235566665545554   37888999988874

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=98.15  E-value=2.7e-06  Score=69.18  Aligned_cols=123  Identities=13%  Similarity=0.138  Sum_probs=76.9

Q ss_pred             cEEEEEeCCc----cHHHHHHHhccHHHHHHHHh-CCCCeEEEEEeCCCcccc-c--ccccCCcceEEEEeChhhHHHHh
Q 042754           12 RIVFVTVGTT----CFDALVKAVDTLEVKQELTR-RGYTHLLIQMGRGTYVPT-K--SLGEDGLMAVDYFTFSSSIADHL   83 (178)
Q Consensus        12 ~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~-~~~~~vvv~~G~~~~~~~-~--~~~~~~~~nv~v~~~~~~~~~~~   83 (178)
                      +.++++.|+.    |...+++++      ..+.. .++ ++ +++|....... .  ........+|.+.++.+++..+|
T Consensus       211 ~~~i~~~G~~~~~Kg~~~li~a~------~~l~~~~~~-~l-~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~  282 (394)
T 2jjm_A          211 EKILIHISNFRKVKRVQDVVQAF------AKIVTEVDA-KL-LLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELL  282 (394)
T ss_dssp             -CEEEEECCCCGGGTHHHHHHHH------HHHHHSSCC-EE-EEECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHH
T ss_pred             CeEEEEeeccccccCHHHHHHHH------HHHHhhCCC-EE-EEECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHH
Confidence            4466677764    445555554      33333 243 44 55675432111 1  00111246788888888899999


Q ss_pred             hhccEEE----ecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHHccC
Q 042754           84 RSASLVI----SHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIAGMD  150 (178)
Q Consensus        84 ~~adlvI----shaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~~l~  150 (178)
                      +.||++|    .-+..+++.|++++|+|+|+.+...        ..+.+.+.+.++..   ++++|.++|.++.
T Consensus       283 ~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~--------~~e~v~~~~~g~~~~~~d~~~la~~i~~l~  348 (394)
T 2jjm_A          283 AMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGG--------IPEVIQHGDTGYLCEVGDTTGVADQAIQLL  348 (394)
T ss_dssp             HTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTT--------STTTCCBTTTEEEECTTCHHHHHHHHHHHH
T ss_pred             HhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCC--------hHHHhhcCCceEEeCCCCHHHHHHHHHHHH
Confidence            9999999    5566789999999999999876542        12223333455543   7788999988874

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=97.92  E-value=1.9e-05  Score=62.92  Aligned_cols=76  Identities=22%  Similarity=0.196  Sum_probs=57.3

Q ss_pred             ceEEEEeChhh--HHHHhhhccEEEec--------------CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-
Q 042754           68 MAVDYFTFSSS--IADHLRSASLVISH--------------AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-  130 (178)
Q Consensus        68 ~nv~v~~~~~~--~~~~~~~adlvIsh--------------aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-  130 (178)
                      .+|++.+|+++  +.++|+.||++|.-              +-..++.|++++|+|+|.....        ...+.+.+ 
T Consensus       212 ~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~--------~~~e~~~~~  283 (342)
T 2iuy_A          212 STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG--------CLAEIVPSV  283 (342)
T ss_dssp             TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT--------THHHHGGGG
T ss_pred             CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC--------ChHHHhccc
Confidence            68999999975  58999999999943              3357899999999999975542        24555555 


Q ss_pred             ---CCCEEEeChhhHHHHHHccCc
Q 042754          131 ---RKHLYCAHPQSLHQVIAGMDL  151 (178)
Q Consensus       131 ---~G~~~~~~~~~L~~~i~~l~~  151 (178)
                         .|+.+..+++++.++|.++..
T Consensus       284 ~~~~g~~~~~d~~~l~~~i~~l~~  307 (342)
T 2iuy_A          284 GEVVGYGTDFAPDEARRTLAGLPA  307 (342)
T ss_dssp             EEECCSSSCCCHHHHHHHHHTSCC
T ss_pred             CCCceEEcCCCHHHHHHHHHHHHH
Confidence               344332288999999999863

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=97.80  E-value=0.0001  Score=61.81  Aligned_cols=76  Identities=18%  Similarity=0.123  Sum_probs=56.1

Q ss_pred             cceEEEEeCh--hhHHHHhhhc----cEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE
Q 042754           67 LMAVDYFTFS--SSIADHLRSA----SLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC  136 (178)
Q Consensus        67 ~~nv~v~~~~--~~~~~~~~~a----dlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~  136 (178)
                      ..+|.+.+++  +++..+|+.|    |++|.-+    -..++.|++++|+|+|+-...        ...+.+.+...|+.
T Consensus       334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~--------g~~e~v~~~~~g~l  405 (499)
T 2r60_A          334 RGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNG--------GPAEILDGGKYGVL  405 (499)
T ss_dssp             BTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSB--------HHHHHTGGGTSSEE
T ss_pred             CceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCC--------CHHHHhcCCceEEE
Confidence            4579999997  5799999999    9999543    347999999999999975432        23444555434443


Q ss_pred             e---ChhhHHHHHHccC
Q 042754          137 A---HPQSLHQVIAGMD  150 (178)
Q Consensus       137 ~---~~~~L~~~i~~l~  150 (178)
                      .   +++.|.++|.++.
T Consensus       406 ~~~~d~~~la~~i~~ll  422 (499)
T 2r60_A          406 VDPEDPEDIARGLLKAF  422 (499)
T ss_dssp             ECTTCHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHH
Confidence            2   7788999988874

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*

Probab=97.75  E-value=3.8e-05  Score=62.77  Aligned_cols=80  Identities=14%  Similarity=0.114  Sum_probs=61.2

Q ss_pred             eEEEEeChhhHHHHhhhccEEEe-----cCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-ChhhH
Q 042754           69 AVDYFTFSSSIADHLRSASLVIS-----HAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-HPQSL  142 (178)
Q Consensus        69 nv~v~~~~~~~~~~~~~adlvIs-----haG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-~~~~L  142 (178)
                      ++.+.++..++..+|+.||+++.     -.|+.++.|++++|+|+|.-|..    +...+..+.+.+.|+++.. +++.|
T Consensus       261 ~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~----~~~~e~~~~~~~~G~l~~~~d~~~L  336 (374)
T 2xci_A          261 DVILVDRFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYT----HKVNDLKEFLEKEGAGFEVKNETEL  336 (374)
T ss_dssp             SEEECCSSSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCC----TTSHHHHHHHHHTTCEEECCSHHHH
T ss_pred             cEEEECCHHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCc----cChHHHHHHHHHCCCEEEeCCHHHH
Confidence            56777778899999999999654     23458999999999999965543    1244566666678888755 88999


Q ss_pred             HHHHHccCcc
Q 042754          143 HQVIAGMDLE  152 (178)
Q Consensus       143 ~~~i~~l~~~  152 (178)
                      .++|.+++.+
T Consensus       337 a~ai~~ll~d  346 (374)
T 2xci_A          337 VTKLTELLSV  346 (374)
T ss_dssp             HHHHHHHHHS
T ss_pred             HHHHHHHHhH
Confidence            9999998643

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=97.74  E-value=0.00042  Score=57.06  Aligned_cols=134  Identities=10%  Similarity=-0.006  Sum_probs=81.8

Q ss_pred             CcEEEEEeCCc-cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChh--hHHHHhhhcc
Q 042754           11 KRIVFVTVGTT-CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSS--SIADHLRSAS   87 (178)
Q Consensus        11 ~~~ilVt~Gs~-~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~--~~~~~~~~ad   87 (178)
                      .+.++++.|.. ..+.++..+     .+  ...++ ++++ .|.... ..    .....+|.+.++++  ++..+|+.||
T Consensus       221 ~~~~i~~vGrl~~~Kg~~~~l-----~~--~~~~~-~l~i-vG~g~~-~~----~~l~~~V~f~G~~~~~~l~~~~~~ad  286 (406)
T 2hy7_A          221 EGIHAVAVGSMLFDPEFFVVA-----SK--AFPQV-TFHV-IGSGMG-RH----PGYGDNVIVYGEMKHAQTIGYIKHAR  286 (406)
T ss_dssp             SSEEEEEECCTTBCHHHHHHH-----HH--HCTTE-EEEE-ESCSSC-CC----TTCCTTEEEECCCCHHHHHHHHHTCS
T ss_pred             CCcEEEEEeccccccCHHHHH-----HH--hCCCe-EEEE-EeCchH-Hh----cCCCCCEEEcCCCCHHHHHHHHHhcC
Confidence            44678888976 334443222     11  12343 5544 576541 11    11346899999985  6899999999


Q ss_pred             EEEec----CChHHHHHHH-------HcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE-e---ChhhHHHHHHccCcc
Q 042754           88 LVISH----AGSGSIFETL-------RHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC-A---HPQSLHQVIAGMDLE  152 (178)
Q Consensus        88 lvIsh----aG~~Ti~E~l-------~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~---~~~~L~~~i~~l~~~  152 (178)
                      ++|.-    +-..++.|++       ++|+|+|.-..              +.+...|+. .   +++.|.++|.+++.+
T Consensus       287 v~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~--------------v~~~~~G~l~v~~~d~~~la~ai~~ll~~  352 (406)
T 2hy7_A          287 FGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA--------------VVGPYKSRFGYTPGNADSVIAAITQALEA  352 (406)
T ss_dssp             EEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG--------------GTCSCSSEEEECTTCHHHHHHHHHHHHHC
T ss_pred             EEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh--------------cccCcceEEEeCCCCHHHHHHHHHHHHhC
Confidence            99852    3346899999       99999997432              333223333 2   788899999888543


Q ss_pred             cCCCCCCCChh-HHHHHHHHh
Q 042754          153 SLLPYQPGDAT-PVAKLINRF  172 (178)
Q Consensus       153 ~~~~~~~~~~~-~i~~~i~~~  172 (178)
                      ....+.....+ ++++.+.++
T Consensus       353 ~~~~~~~~~sw~~~a~~~~~~  373 (406)
T 2hy7_A          353 PRVRYRQCLNWSDTTDRVLDP  373 (406)
T ss_dssp             CCCCCSCCCBHHHHHHHHHCG
T ss_pred             cchhhhhcCCHHHHHHHHHHh
Confidence            22233334455 666666554

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=97.71  E-value=0.00012  Score=62.26  Aligned_cols=80  Identities=10%  Similarity=0.066  Sum_probs=59.0

Q ss_pred             ceEEEEeChh--hHHHHhhhccEEEec---CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE--EeChh
Q 042754           68 MAVDYFTFSS--SIADHLRSASLVISH---AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLY--CAHPQ  140 (178)
Q Consensus        68 ~nv~v~~~~~--~~~~~~~~adlvIsh---aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~--~~~~~  140 (178)
                      .+|.+.++++  ++..+|+.||++|.-   ++++|+.|++++|+|+|+.|-....   -...+..+...|..-  .-+++
T Consensus       434 ~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~---s~~~~~~l~~~g~~e~v~~~~~  510 (568)
T 2vsy_A          434 QRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFA---ARVAGSLNHHLGLDEMNVADDA  510 (568)
T ss_dssp             GGEEEECCCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGG---GSHHHHHHHHHTCGGGBCSSHH
T ss_pred             hHEEeeCCCCHHHHHHHHhcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCCCch---HHHHHHHHHHCCChhhhcCCHH
Confidence            6899999995  799999999999843   5668999999999999987654211   112345566666652  23788


Q ss_pred             hHHHHHHccC
Q 042754          141 SLHQVIAGMD  150 (178)
Q Consensus       141 ~L~~~i~~l~  150 (178)
                      .+.+++.++.
T Consensus       511 ~la~~i~~l~  520 (568)
T 2vsy_A          511 AFVAKAVALA  520 (568)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            8888887764

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=97.67  E-value=4.1e-05  Score=54.62  Aligned_cols=124  Identities=17%  Similarity=0.202  Sum_probs=72.0

Q ss_pred             CcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh-CCCCeEEEEEeCCCcccc-cccccCCcceEEEEeCh--hhHHHH
Q 042754           11 KRIVFVTVGTT----CFDALVKAVDTLEVKQELTR-RGYTHLLIQMGRGTYVPT-KSLGEDGLMAVDYFTFS--SSIADH   82 (178)
Q Consensus        11 ~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~-~~~~~vvv~~G~~~~~~~-~~~~~~~~~nv~v~~~~--~~~~~~   82 (178)
                      +|.++++.|+.    |...+++++      ..+.. .++ + ++++|....... .......+.++++ +|+  +++..+
T Consensus         1 ~~~~i~~~G~~~~~Kg~~~li~a~------~~l~~~~~~-~-l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~   71 (166)
T 3qhp_A            1 TPFKIAMVGRYSNEKNQSVLIKAV------ALSKYKQDI-V-LLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEI   71 (166)
T ss_dssp             CCEEEEEESCCSTTTTHHHHHHHH------HTCTTGGGE-E-EEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHH
T ss_pred             CceEEEEEeccchhcCHHHHHHHH------HHhccCCCe-E-EEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHH
Confidence            36788899975    445555554      22322 233 4 445675432111 1000111237787 886  459999


Q ss_pred             hhhccEEEec----CChHHHHHHHHcCC-CEEEEeCCCCCCchHHHHHHHHHhCCCEEE-eChhhHHHHHHccC
Q 042754           83 LRSASLVISH----AGSGSIFETLRHGK-PLIVVVNEDLMDNHQSELAEELAARKHLYC-AHPQSLHQVIAGMD  150 (178)
Q Consensus        83 ~~~adlvIsh----aG~~Ti~E~l~~g~-P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~-~~~~~L~~~i~~l~  150 (178)
                      |+.||++|.-    +...++.|++++|+ |+|.-....   +    ....+.+.+..+. .+++.+.++|.++.
T Consensus        72 ~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~----~~~~~~~~~~~~~~~~~~~l~~~i~~l~  138 (166)
T 3qhp_A           72 LKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLS---A----TRQFALDERSLFEPNNAKDLSAKIDWWL  138 (166)
T ss_dssp             HTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---G----GGGGCSSGGGEECTTCHHHHHHHHHHHH
T ss_pred             HHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCC---c----hhhhccCCceEEcCCCHHHHHHHHHHHH
Confidence            9999999973    34579999999997 988733221   1    1111122233222 37888999998875

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=97.64  E-value=0.00015  Score=60.44  Aligned_cols=122  Identities=16%  Similarity=0.130  Sum_probs=74.2

Q ss_pred             EEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCc--cc-ccccccCCcceEE-EEeChhh-HHHHh
Q 042754           13 IVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTY--VP-TKSLGEDGLMAVD-YFTFSSS-IADHL   83 (178)
Q Consensus        13 ~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~--~~-~~~~~~~~~~nv~-v~~~~~~-~~~~~   83 (178)
                      .++++.|..    |...+++++      ..+.+.++ ++++ +|....  .. ........+.++. ..+|.++ +..+|
T Consensus       292 ~~i~~vGrl~~~Kg~~~li~a~------~~l~~~~~-~l~i-vG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~  363 (485)
T 1rzu_A          292 PLFCVISRLTWQKGIDLMAEAV------DEIVSLGG-RLVV-LGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQ  363 (485)
T ss_dssp             CEEEEESCBSTTTTHHHHHTTH------HHHHHTTC-EEEE-EECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHH
T ss_pred             eEEEEEccCccccCHHHHHHHH------HHHHhcCc-eEEE-EeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHH
Confidence            478888875    455555554      33433454 6554 565431  11 1100011235776 5788655 47999


Q ss_pred             hhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhC---------CCEEEe---ChhhHHHHHH
Q 042754           84 RSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR---------KHLYCA---HPQSLHQVIA  147 (178)
Q Consensus        84 ~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~---------G~~~~~---~~~~L~~~i~  147 (178)
                      +.||++|.-+    -..++.|++++|+|+|+-...        ...+.+.+.         +.|+..   +++.|.++|.
T Consensus       364 ~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~g--------g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~  435 (485)
T 1rzu_A          364 AGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG--------GLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIR  435 (485)
T ss_dssp             HHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH--------HHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHH
T ss_pred             hcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCC--------ChhheecccccccccccCCcceEeCCCCHHHHHHHHH
Confidence            9999999543    357999999999999975431        244444443         455433   7788988887


Q ss_pred             ccC
Q 042754          148 GMD  150 (178)
Q Consensus       148 ~l~  150 (178)
                      ++.
T Consensus       436 ~ll  438 (485)
T 1rzu_A          436 RTV  438 (485)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=97.63  E-value=0.00022  Score=58.10  Aligned_cols=72  Identities=11%  Similarity=0.050  Sum_probs=52.3

Q ss_pred             EEEEeChh--hHHHHhhhccEEEe----cCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhC------------
Q 042754           70 VDYFTFSS--SIADHLRSASLVIS----HAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR------------  131 (178)
Q Consensus        70 v~v~~~~~--~~~~~~~~adlvIs----haG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~------------  131 (178)
                      +.+.+|++  ++..+|+.||++|.    -+...++.|++++|+|+|.-...        ...+.+.+.            
T Consensus       256 v~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~--------g~~e~v~~~~~~~i~~~~~~~  327 (413)
T 3oy2_A          256 MINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG--------GADDYFSGDCVYKIKPSAWIS  327 (413)
T ss_dssp             EEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH--------HHHHHSCTTTSEEECCCEEEE
T ss_pred             eeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC--------ChHHHHccCcccccccccccc
Confidence            66778875  69999999999995    34456999999999999975432        233333321            


Q ss_pred             -----CC--EEE-eChhhHHHHHHccC
Q 042754          132 -----KH--LYC-AHPQSLHQVIAGMD  150 (178)
Q Consensus       132 -----G~--~~~-~~~~~L~~~i~~l~  150 (178)
                           |+  .+. .+++.|.++| ++.
T Consensus       328 ~~~~~G~~gl~~~~d~~~la~~i-~l~  353 (413)
T 3oy2_A          328 VDDRDGIGGIEGIIDVDDLVEAF-TFF  353 (413)
T ss_dssp             CTTTCSSCCEEEECCHHHHHHHH-HHT
T ss_pred             cccccCcceeeCCCCHHHHHHHH-HHh
Confidence                 44  333 4899999999 885

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=97.57  E-value=0.0002  Score=59.75  Aligned_cols=124  Identities=16%  Similarity=0.165  Sum_probs=74.2

Q ss_pred             CcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCC--ccc-ccccccCCcceEE-EEeChhh-HHH
Q 042754           11 KRIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGT--YVP-TKSLGEDGLMAVD-YFTFSSS-IAD   81 (178)
Q Consensus        11 ~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~--~~~-~~~~~~~~~~nv~-v~~~~~~-~~~   81 (178)
                      .+.++++.|..    |...+++++      ..+...++ ++++ +|...  ... ........+.++. ..+|.++ +..
T Consensus       291 ~~~~i~~vGrl~~~Kg~~~li~a~------~~l~~~~~-~l~i-vG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~  362 (485)
T 2qzs_A          291 KVPLFAVVSRLTSQKGLDLVLEAL------PGLLEQGG-QLAL-LGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHR  362 (485)
T ss_dssp             TSCEEEEEEEESGGGCHHHHHHHH------HHHHHTTC-EEEE-EEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHH
T ss_pred             CCeEEEEeccCccccCHHHHHHHH------HHHhhCCc-EEEE-EeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHH
Confidence            34566677754    556666665      23333455 6554 45432  111 1100011225675 6778655 479


Q ss_pred             HhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhC---------CCEEEe---ChhhHHHH
Q 042754           82 HLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAAR---------KHLYCA---HPQSLHQV  145 (178)
Q Consensus        82 ~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~---------G~~~~~---~~~~L~~~  145 (178)
                      +|+.||++|.-+    ...++.|++++|+|+|+-...        ...+.+.+.         +.|+..   +++.|.++
T Consensus       363 ~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~g--------g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~  434 (485)
T 2qzs_A          363 IMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTG--------GLADTVSDCSLENLADGVASGFVFEDSNAWSLLRA  434 (485)
T ss_dssp             HHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH--------HHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHH
T ss_pred             HHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCC--------CccceeccCccccccccccceEEECCCCHHHHHHH
Confidence            999999999643    357899999999999975321        234444443         445433   77889998


Q ss_pred             HHccC
Q 042754          146 IAGMD  150 (178)
Q Consensus       146 i~~l~  150 (178)
                      |.++.
T Consensus       435 i~~ll  439 (485)
T 2qzs_A          435 IRRAF  439 (485)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=97.57  E-value=0.00018  Score=58.52  Aligned_cols=122  Identities=20%  Similarity=0.169  Sum_probs=73.0

Q ss_pred             EEEEEeCCc-----cHHHHHHHhccHHHHHHHHh----CCCCeEEEEEeCCCcc--cc-cccccCCcceEEEEeChh--h
Q 042754           13 IVFVTVGTT-----CFDALVKAVDTLEVKQELTR----RGYTHLLIQMGRGTYV--PT-KSLGEDGLMAVDYFTFSS--S   78 (178)
Q Consensus        13 ~ilVt~Gs~-----~~~~l~~~~~~~~~~~~l~~----~~~~~vvv~~G~~~~~--~~-~~~~~~~~~nv~v~~~~~--~   78 (178)
                      .++++.|+.     |...+++++      ..+..    .++ ++ +++|.....  .. .......+.++...+|++  +
T Consensus       252 ~~i~~~G~~~~~~Kg~~~li~a~------~~l~~~~~~~~~-~l-~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~  323 (439)
T 3fro_A          252 VTFMFIGRFDRGQKGVDVLLKAI------EILSSKKEFQEM-RF-IIIGKGDPELEGWARSLEEKHGNVKVITEMLSREF  323 (439)
T ss_dssp             EEEEEECCSSCTTBCHHHHHHHH------HHHHTSGGGGGE-EE-EEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHH
T ss_pred             cEEEEEcccccccccHHHHHHHH------HHHHhcccCCCe-EE-EEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHH
Confidence            677777854     344555554      34433    333 44 556765421  11 100011224555667564  4


Q ss_pred             HHHHhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---ChhhHHHHHHccCc
Q 042754           79 IADHLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HPQSLHQVIAGMDL  151 (178)
Q Consensus        79 ~~~~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~~~L~~~i~~l~~  151 (178)
                      +..+|+.||++|.-    +-..++.|++++|+|+|.-...        ...+.+. .|.++..   +++.+.++|.++..
T Consensus       324 ~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~--------~~~e~~~-~~~g~~~~~~d~~~la~~i~~ll~  394 (439)
T 3fro_A          324 VRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG--------GLRDIIT-NETGILVKAGDPGELANAILKALE  394 (439)
T ss_dssp             HHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESST--------HHHHHCC-TTTCEEECTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCC--------CcceeEE-cCceEEeCCCCHHHHHHHHHHHHh
Confidence            88999999999954    3358999999999999975432        2333332 3455433   78899999887753

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=97.31  E-value=0.0014  Score=54.27  Aligned_cols=120  Identities=15%  Similarity=0.192  Sum_probs=72.2

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHh-C----CCCeEEEEEeCCCcccccccccCCcceEEEEeCh--hh
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTR-R----GYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS--SS   78 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~-~----~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~--~~   78 (178)
                      +.+.|+..++..    |.+.+++++      ..+.+ .    ++ + +++.|..... ...   ....+++..+++  ++
T Consensus       240 ~~~~il~~gr~~~~~Kg~~~li~A~------~~l~~~~~~~~~~-~-l~ivG~~~~~-~~l---~~~~~v~f~G~~~~~~  307 (413)
T 2x0d_A          240 KEKIILVYGRPSVKRNAFTLIVEAL------KIFVQKYDRSNEW-K-IISVGEKHKD-IAL---GKGIHLNSLGKLTLED  307 (413)
T ss_dssp             CCSEEEEEECTTCGGGCHHHHHHHH------HHHHHHCTTGGGC-E-EEEEESCCCC-EEE---ETTEEEEEEESCCHHH
T ss_pred             CCCEEEEEecCchhccCHHHHHHHH------HHHHHhCCCCCce-E-EEEEcCCchh-hhc---CCcCcEEEcCCCCHHH
Confidence            345565555532    455666665      22222 1    13 4 4556765432 111   123588889997  46


Q ss_pred             HHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE---eChhhHHHHHHccC
Q 042754           79 IADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC---AHPQSLHQVIAGMD  150 (178)
Q Consensus        79 ~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~---~~~~~L~~~i~~l~  150 (178)
                      +.++|+.||++|.-+    =+.++.|++++|+|+|. .... . .      +.+.+...|+.   .+++.|.++|.++.
T Consensus       308 l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g-~-~------e~v~~~~~G~lv~~~d~~~la~ai~~ll  377 (413)
T 2x0d_A          308 YADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVIT-NKYE-N-K------DLSNWHSNIVSLEQLNPENIAETLVELC  377 (413)
T ss_dssp             HHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT-T-B------CGGGTBTTEEEESSCSHHHHHHHHHHHH
T ss_pred             HHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC-c-c------hhhhcCCCEEEeCCCCHHHHHHHHHHHH
Confidence            999999999998532    23578999999999997 3321 1 1      22233334543   37889999998875

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=96.79  E-value=0.0089  Score=53.83  Aligned_cols=76  Identities=12%  Similarity=0.105  Sum_probs=51.6

Q ss_pred             CcceEEEEeChh------hHHHHhh-hccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCE
Q 042754           66 GLMAVDYFTFSS------SIADHLR-SASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHL  134 (178)
Q Consensus        66 ~~~nv~v~~~~~------~~~~~~~-~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~  134 (178)
                      ...+|.+.++.+      ++..+|. .||++|.-    +-+.++.||+++|+|+|+-...    +    ..+.+.+...|
T Consensus       638 L~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~G----G----~~EiV~dg~~G  709 (816)
T 3s28_A          638 LNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----G----PAEIIVHGKSG  709 (816)
T ss_dssp             CBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSB----T----HHHHCCBTTTB
T ss_pred             CCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCC----C----hHHHHccCCcE
Confidence            346888888543      3667777 68999964    3458999999999999975432    1    34444444455


Q ss_pred             EEe---ChhhHHHHHHcc
Q 042754          135 YCA---HPQSLHQVIAGM  149 (178)
Q Consensus       135 ~~~---~~~~L~~~i~~l  149 (178)
                      +..   +++.+.++|.++
T Consensus       710 llv~p~D~e~LA~aI~~l  727 (816)
T 3s28_A          710 FHIDPYHGDQAADTLADF  727 (816)
T ss_dssp             EEECTTSHHHHHHHHHHH
T ss_pred             EEeCCCCHHHHHHHHHHH
Confidence            543   678888888554

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=96.49  E-value=0.0043  Score=50.16  Aligned_cols=100  Identities=13%  Similarity=0.168  Sum_probs=53.2

Q ss_pred             CCcEEEEEeCCc-cHHHH-HHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceE-EEEe--ChhhHHHHhh
Q 042754           10 LKRIVFVTVGTT-CFDAL-VKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAV-DYFT--FSSSIADHLR   84 (178)
Q Consensus        10 ~~~~ilVt~Gs~-~~~~l-~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv-~v~~--~~~~~~~~~~   84 (178)
                      +++.|.+..|+. ..+.. .+.+  .++++.|.+.++ ++++..|+.+...........+.++ .+.+  -..++..+++
T Consensus       184 ~~~~i~i~pga~~~~k~wp~~~~--~~l~~~l~~~g~-~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~  260 (349)
T 3tov_A          184 TDILIGFNIGSAVPEKRWPAERF--AHVADYFGRLGY-KTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMN  260 (349)
T ss_dssp             TCCEEEEECCCSSGGGCCCHHHH--HHHHHHHHHHTC-EEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCccCCCCHHHH--HHHHHHHHhCCC-eEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHH
Confidence            568888888864 22211 1111  112344444466 7776433332211110000011122 2222  2346889999


Q ss_pred             hccEEEec-CChHHHHHHHHcCCCEEEEeCC
Q 042754           85 SASLVISH-AGSGSIFETLRHGKPLIVVVNE  114 (178)
Q Consensus        85 ~adlvIsh-aG~~Ti~E~l~~g~P~iviP~~  114 (178)
                      .||++|+. .|.  +.=|.++|+|+|.+--+
T Consensus       261 ~a~~~i~~DsG~--~HlAaa~g~P~v~lfg~  289 (349)
T 3tov_A          261 RCNLLITNDSGP--MHVGISQGVPIVALYGP  289 (349)
T ss_dssp             TCSEEEEESSHH--HHHHHTTTCCEEEECSS
T ss_pred             hCCEEEECCCCH--HHHHHhcCCCEEEEECC
Confidence            99999998 554  33388899999998443

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=96.31  E-value=0.017  Score=46.58  Aligned_cols=112  Identities=11%  Similarity=0.020  Sum_probs=74.5

Q ss_pred             CcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChh--hHHHHhhhccE
Q 042754           11 KRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSS--SIADHLRSASL   88 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~--~~~~~~~~adl   88 (178)
                      .+.+++..|+.+-   .+.+      ..+ ..++ ++ ++.|.+...  .     .+ ||+..+++|  ++..+++.+|+
T Consensus       177 ~~~~i~yaG~l~k---~~~L------~~l-~~~~-~f-~ivG~G~~~--~-----l~-nV~f~G~~~~~el~~~l~~~~~  236 (339)
T 3rhz_A          177 LKREIHFPGNPER---FSFV------KEW-KYDI-PL-KVYTWQNVE--L-----PQ-NVHKINYRPDEQLLMEMSQGGF  236 (339)
T ss_dssp             EEEEEEECSCTTT---CGGG------GGC-CCSS-CE-EEEESCCCC--C-----CT-TEEEEECCCHHHHHHHHHTEEE
T ss_pred             CCcEEEEeCCcch---hhHH------HhC-CCCC-eE-EEEeCCccc--C-----cC-CEEEeCCCCHHHHHHHHHhCCE
Confidence            3467899998762   1222      112 2344 54 556776532  1     23 899999986  48888877666


Q ss_pred             EEec-CC----------hHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-ChhhHHHHHHccC
Q 042754           89 VISH-AG----------SGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-HPQSLHQVIAGMD  150 (178)
Q Consensus        89 vIsh-aG----------~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-~~~~L~~~i~~l~  150 (178)
                      .+.. .|          .+.+.|.+++|+|+|+-+..        .+++.+++.+.|+.. +.+++.+.+.++.
T Consensus       237 ~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~--------~~~~~v~~~~~G~~~~~~~e~~~~i~~l~  302 (339)
T 3rhz_A          237 GLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGI--------ANQELIENNGLGWIVKDVEEAIMKVKNVN  302 (339)
T ss_dssp             EECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTC--------TTTHHHHHHTCEEEESSHHHHHHHHHHCC
T ss_pred             EEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccCh--------hHHHHHHhCCeEEEeCCHHHHHHHHHHhC
Confidence            5543 33          34689999999999975432        467788888999865 5677888887764

>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}

Probab=96.08  E-value=0.19  Score=37.52  Aligned_cols=140  Identities=16%  Similarity=0.187  Sum_probs=69.1

Q ss_pred             CCCCCCCCCCcEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCC--------------------ccccc
Q 042754            2 GDTRDSVSLKRIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGT--------------------YVPTK   60 (178)
Q Consensus         2 ~~~~~~~~~~~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~--------------------~~~~~   60 (178)
                      ||.......++.|.|.+||.+.+ ...+..  .++-+.|++.++   .+++|...                    ..+..
T Consensus        13 g~~~~~~~~~~~v~Vfggs~~~~~~~~~~A--~~lg~~La~~g~---~lV~GGG~~GlM~a~~~gA~~~GG~viGv~p~~   87 (199)
T 3qua_A           13 GDVKEGQDRQWAVCVYCASGPTHPELLELA--AEVGSSIAARGW---TLVSGGGNVSAMGAVAQAARAKGGHTVGVIPKA   87 (199)
T ss_dssp             --------CCCEEEEECCSSCCCHHHHHHH--HHHHHHHHHTTC---EEEECCBCSHHHHHHHHHHHHTTCCEEEEEEGG
T ss_pred             cccccccCCCCEEEEEECCCCCCHHHHHHH--HHHHHHHHHCCC---EEEECCCccCHHHHHHHHHHHcCCcEEEEeCch
Confidence            77766666778999999976422 233333  233456666553   34566432                    00100


Q ss_pred             ---ccc-cCCcceEEEEeChhh-HHHHhhhccEEEe-cCChHHHHHHHH---------cCCCEEEEeCCCCCCchHHHHH
Q 042754           61 ---SLG-EDGLMAVDYFTFSSS-IADHLRSASLVIS-HAGSGSIFETLR---------HGKPLIVVVNEDLMDNHQSELA  125 (178)
Q Consensus        61 ---~~~-~~~~~nv~v~~~~~~-~~~~~~~adlvIs-haG~~Ti~E~l~---------~g~P~iviP~~~~~~~~Q~~nA  125 (178)
                         ... ...-....++++... -..++..||.+|. -||.||+.|...         +++|++++-...-. ++=...-
T Consensus        88 l~~~e~~~~~~~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~~gfw-~~l~~~l  166 (199)
T 3qua_A           88 LVHRELADVDAAELIVTDTMRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDPFGHY-DGLLTWL  166 (199)
T ss_dssp             GTTTTTBCTTSSEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTSTT-HHHHHHH
T ss_pred             hhhccccCCCCCeeEEcCCHHHHHHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcCCccc-hHHHHHH
Confidence               000 001123445555432 2344578886655 577889888753         58999988532111 1222223


Q ss_pred             HHHHhCCCEE---------EeChhhHHHHHH
Q 042754          126 EELAARKHLY---------CAHPQSLHQVIA  147 (178)
Q Consensus       126 ~~l~~~G~~~---------~~~~~~L~~~i~  147 (178)
                      +.+.+.|+.-         .-+++++.+.|+
T Consensus       167 ~~~~~~Gfi~~~~~~~i~~~d~~~e~~~~l~  197 (199)
T 3qua_A          167 RGLVPTGYVSQRAMDSLVVVDNVEAALEACA  197 (199)
T ss_dssp             HHTTTTTSSCHHHHHTSEEESSHHHHHHHHS
T ss_pred             HHHHHCCCCCHHHCCeEEEeCCHHHHHHHHh
Confidence            4566667542         236777766664

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*

Probab=96.01  E-value=0.013  Score=46.35  Aligned_cols=99  Identities=18%  Similarity=0.137  Sum_probs=53.1

Q ss_pred             CCCcEEEEEeCCcc-HHHH-HHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeC--hhhHHHHhh
Q 042754            9 SLKRIVFVTVGTTC-FDAL-VKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTF--SSSIADHLR   84 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~-~~~l-~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~--~~~~~~~~~   84 (178)
                      .+++.|.+..|+.. .+.. .+.+  .++++.|.+.++ ++++..|................++.+.+-  ..++..+++
T Consensus       176 ~~~~~i~l~pga~~~~k~wp~~~~--~~l~~~L~~~~~-~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~  252 (326)
T 2gt1_A          176 DAGEYAVFLHATTRDDKHWPEEHW--RELIGLLADSGI-RIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLA  252 (326)
T ss_dssp             TTTSEEEEECCCSSGGGSCCHHHH--HHHHHHTTTTCC-EEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHH
T ss_pred             cCCCEEEEEeCCCCccccCCHHHH--HHHHHHHHHCCC-cEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHH
Confidence            35678888888642 2111 1111  111334444465 777665643211110000001123333332  357889999


Q ss_pred             hccEEEec-CChHHHHHHHHcCCCEEEEe
Q 042754           85 SASLVISH-AGSGSIFETLRHGKPLIVVV  112 (178)
Q Consensus        85 ~adlvIsh-aG~~Ti~E~l~~g~P~iviP  112 (178)
                      .||++|+. .|...+  |.++|+|+|.+-
T Consensus       253 ~a~l~I~~DSG~~Hl--Aaa~g~P~v~lf  279 (326)
T 2gt1_A          253 GAKFVVSVDTGLSHL--TAALDRPNITVY  279 (326)
T ss_dssp             TCSEEEEESSHHHHH--HHHTTCCEEEEE
T ss_pred             hCCEEEecCCcHHHH--HHHcCCCEEEEE
Confidence            99999998 554444  667999999984

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=95.99  E-value=0.019  Score=49.14  Aligned_cols=91  Identities=16%  Similarity=0.156  Sum_probs=54.8

Q ss_pred             EEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc---ccccCCcceEEEEeCh--hhHHHHh
Q 042754           13 IVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK---SLGEDGLMAVDYFTFS--SSIADHL   83 (178)
Q Consensus        13 ~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~---~~~~~~~~nv~v~~~~--~~~~~~~   83 (178)
                      .++++.|..    |...+++++      ..+.+.+. ++++ .|........   ......+.++.+..+.  +++..++
T Consensus       328 p~i~~vgRl~~~Kg~~~li~a~------~~l~~~~~-~l~l-~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  399 (536)
T 3vue_A          328 PLIAFIGRLEEQKGPDVMAAAI------PELMQEDV-QIVL-LGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIM  399 (536)
T ss_dssp             CEEEEECCBSGGGCHHHHHHHH------HHHTTSSC-EEEE-ECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHH
T ss_pred             cEEEEEeeccccCChHHHHHHH------HHhHhhCC-eEEE-EeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHH
Confidence            466777764    566666665      34444554 6544 4443321110   0001123466666554  3477899


Q ss_pred             hhccEEEecC----ChHHHHHHHHcCCCEEEE
Q 042754           84 RSASLVISHA----GSGSIFETLRHGKPLIVV  111 (178)
Q Consensus        84 ~~adlvIsha----G~~Ti~E~l~~g~P~ivi  111 (178)
                      +.||++|.-+    =+.+++||+++|+|.|+-
T Consensus       400 ~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s  431 (536)
T 3vue_A          400 AGADVLAVPSRFEPCGLIQLQGMRYGTPCACA  431 (536)
T ss_dssp             HHCSEEEECCSCCSSCSHHHHHHHTTCCEEEC
T ss_pred             HhhheeecccccCCCCHHHHHHHHcCCCEEEc
Confidence            9999999642    236999999999999974

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=95.64  E-value=0.018  Score=45.80  Aligned_cols=100  Identities=8%  Similarity=0.052  Sum_probs=54.3

Q ss_pred             CCcEEEEEeCC-c-cHHHH-HHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCc----ceEE-EEeC--hhhH
Q 042754           10 LKRIVFVTVGT-T-CFDAL-VKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGL----MAVD-YFTF--SSSI   79 (178)
Q Consensus        10 ~~~~ilVt~Gs-~-~~~~l-~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~----~nv~-v~~~--~~~~   79 (178)
                      +++.|.+..|+ . ..+.. .+.+  .++++.|...++ ++++..|+.+...........+    .++. +.+.  ..++
T Consensus       179 ~~~~i~l~pga~~~~~k~wp~~~~--~~l~~~L~~~~~-~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~  255 (348)
T 1psw_A          179 ERPMIGFCPGAEFGPAKRWPHYHY--AELAKQLIDEGY-QVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQA  255 (348)
T ss_dssp             SSCEEEEECCCTTCGGGSCCHHHH--HHHHHHHHHTTC-EEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHH
T ss_pred             CCcEEEEECCCCccccCCCCHHHH--HHHHHHHHHCCC-eEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHH
Confidence            46788888887 3 22211 1111  122345555565 7776533332111000000011    1232 2232  3568


Q ss_pred             HHHhhhccEEEecCChHHHHHHHHcCCCEEEEeC
Q 042754           80 ADHLRSASLVISHAGSGSIFETLRHGKPLIVVVN  113 (178)
Q Consensus        80 ~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~  113 (178)
                      ..+|+.||++|+.-. |++.-|.++|+|+|.+--
T Consensus       256 ~ali~~a~l~I~~Ds-g~~HlAaa~g~P~v~lfg  288 (348)
T 1psw_A          256 VILIAACKAIVTNDS-GLMHVAAALNRPLVALYG  288 (348)
T ss_dssp             HHHHHTSSEEEEESS-HHHHHHHHTTCCEEEEES
T ss_pred             HHHHHhCCEEEecCC-HHHHHHHHcCCCEEEEEC
Confidence            899999999999843 455668899999998843

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A

Probab=95.06  E-value=0.1  Score=45.51  Aligned_cols=76  Identities=7%  Similarity=0.014  Sum_probs=52.8

Q ss_pred             ceEEEEeChhh--HHHHhhhccEEEec---CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCE---EEeCh
Q 042754           68 MAVDYFTFSSS--IADHLRSASLVISH---AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHL---YCAHP  139 (178)
Q Consensus        68 ~nv~v~~~~~~--~~~~~~~adlvIsh---aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~---~~~~~  139 (178)
                      .++.+.++.+.  +...+..||+++--   +|++|++|++++|+|+|..+-..   -....-+..+...|+.   +..+.
T Consensus       499 ~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~---~asRvgaSlL~~~GLpE~LIA~d~  575 (631)
T 3q3e_A          499 DSATAHPHSPYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAE---VHEHIDEGLFKRLGLPEWLIANTV  575 (631)
T ss_dssp             GGEEEECCCCHHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSS---HHHHHHHHHHHHTTCCGGGEESSH
T ss_pred             ccEEEcCCCCHHHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCc---HHHHhHHHHHHhcCCCcceecCCH
Confidence            46777787753  44677999999754   78899999999999999987542   1233445567778875   23355


Q ss_pred             hhHHHHH
Q 042754          140 QSLHQVI  146 (178)
Q Consensus       140 ~~L~~~i  146 (178)
                      ++..+..
T Consensus       576 eeYv~~A  582 (631)
T 3q3e_A          576 DEYVERA  582 (631)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            5554443

>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}

Probab=94.73  E-value=0.88  Score=33.55  Aligned_cols=134  Identities=16%  Similarity=0.089  Sum_probs=68.5

Q ss_pred             CCCCCcEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCC--------------------ccccc---cc
Q 042754            7 SVSLKRIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGT--------------------YVPTK---SL   62 (178)
Q Consensus         7 ~~~~~~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~--------------------~~~~~---~~   62 (178)
                      ++.+++.|.|.+||.+.+ ...+..  .++-+.|++.+   +.+++|...                    ..+..   ..
T Consensus         9 ~~~~~~~I~Vfg~s~~~~~~~~~~A--~~lg~~la~~g---~~lv~GGG~~GlM~a~~~ga~~~GG~viGv~p~~l~~~e   83 (189)
T 3sbx_A            9 DEPGRWTVAVYCAAAPTHPELLELA--GAVGAAIAARG---WTLVWGGGHVSAMGAVSSAARAHGGWTVGVIPKMLVHRE   83 (189)
T ss_dssp             ----CCEEEEECCSSCCCHHHHHHH--HHHHHHHHHTT---CEEEECCBCSHHHHHHHHHHHTTTCCEEEEEETTTTTTT
T ss_pred             CCCCCeEEEEEEeCCCCChHHHHHH--HHHHHHHHHCC---CEEEECCCccCHHHHHHHHHHHcCCcEEEEcCchhhhcc
Confidence            344568899999976422 233333  23345666654   345677532                    00110   00


Q ss_pred             c-cCCcceEEEEeChhh-HHHHhhhccEEEe-cCChHHHHHHHH---------cCCCEEEEeCCCCCCchHHHHHHHHHh
Q 042754           63 G-EDGLMAVDYFTFSSS-IADHLRSASLVIS-HAGSGSIFETLR---------HGKPLIVVVNEDLMDNHQSELAEELAA  130 (178)
Q Consensus        63 ~-~~~~~nv~v~~~~~~-~~~~~~~adlvIs-haG~~Ti~E~l~---------~g~P~iviP~~~~~~~~Q~~nA~~l~~  130 (178)
                      . ...-....++++... -..++..||.+|. -||.||+-|...         +++|++++-...- -++=...-+.+.+
T Consensus        84 ~~~~~~~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~gf-w~~l~~~l~~~~~  162 (189)
T 3sbx_A           84 LADHDADELVVTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGH-FDGLRAWLSELAD  162 (189)
T ss_dssp             TBCTTCSEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTCT-THHHHHHHHHHHH
T ss_pred             cCCCCCCeeEEcCCHHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCCcc-chHHHHHHHHHHH
Confidence            0 001123344455432 2345588997655 567899988753         5899998843211 1122223356777


Q ss_pred             CCCEE---------EeChhhHHHHH
Q 042754          131 RKHLY---------CAHPQSLHQVI  146 (178)
Q Consensus       131 ~G~~~---------~~~~~~L~~~i  146 (178)
                      .|+.-         .-+++++.+.|
T Consensus       163 ~Gfi~~~~~~~i~~~d~~ee~~~~l  187 (189)
T 3sbx_A          163 TGYVSRTAMERLIVVDNLDDALQAC  187 (189)
T ss_dssp             TTSSCHHHHHHEEEESSHHHHHHHH
T ss_pred             CCCCCHHHcCeEEEeCCHHHHHHHh
Confidence            77642         23677766655

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=94.15  E-value=0.42  Score=38.41  Aligned_cols=27  Identities=19%  Similarity=0.265  Sum_probs=21.7

Q ss_pred             hccEEEecCChHHH---HHHHHcCCCEEEE
Q 042754           85 SASLVISHAGSGSI---FETLRHGKPLIVV  111 (178)
Q Consensus        85 ~adlvIshaG~~Ti---~E~l~~g~P~ivi  111 (178)
                      +-|+||+.+|+.+.   .-+..+|+|.++.
T Consensus        92 ~PDvVi~~g~~~s~p~~laA~~~~iP~vih  121 (365)
T 3s2u_A           92 RPVCVLGLGGYVTGPGGLAARLNGVPLVIH  121 (365)
T ss_dssp             CCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence            57999999998765   4466789999975

>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A

Probab=93.66  E-value=1.7  Score=32.69  Aligned_cols=80  Identities=16%  Similarity=0.124  Sum_probs=48.6

Q ss_pred             eEEEEeChhh-HHHHhhhccEEE-ecCChHHHHHHH---------HcCCCEEEEeCCCCCCchHHHHHHHHHhCCCE---
Q 042754           69 AVDYFTFSSS-IADHLRSASLVI-SHAGSGSIFETL---------RHGKPLIVVVNEDLMDNHQSELAEELAARKHL---  134 (178)
Q Consensus        69 nv~v~~~~~~-~~~~~~~adlvI-shaG~~Ti~E~l---------~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~---  134 (178)
                      ++.++.+... -..++..||.+| --||.||+-|..         .+++|++++-...-. ++=...-+.+.+.|+.   
T Consensus        88 ~~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw-~~l~~~l~~~~~~Gfi~~~  166 (216)
T 1ydh_A           88 DVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYY-NNLLALFDTGVEEGFIKPG  166 (216)
T ss_dssp             EEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTT-HHHHHHHHHHHHTTSSCHH
T ss_pred             cccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccc-hHHHHHHHHHHHCCCCChH
Confidence            3455555432 123446788765 467889988887         469999988532111 1122223567777763   


Q ss_pred             ------EEeChhhHHHHHHcc
Q 042754          135 ------YCAHPQSLHQVIAGM  149 (178)
Q Consensus       135 ------~~~~~~~L~~~i~~l  149 (178)
                            +.-+++++.+.|.+.
T Consensus       167 ~~~~~~~~d~~ee~~~~l~~~  187 (216)
T 1ydh_A          167 ARNIVVSAPTAKELMEKMEEY  187 (216)
T ss_dssp             HHTTEEEESSHHHHHHHHHHC
T ss_pred             HcCeEEEeCCHHHHHHHHHHh
Confidence                  244888888888764

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=93.63  E-value=0.38  Score=42.60  Aligned_cols=64  Identities=16%  Similarity=0.218  Sum_probs=47.7

Q ss_pred             ceEEEEeChh--hHHHHhhhccEEEe---cCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCE
Q 042754           68 MAVDYFTFSS--SIADHLRSASLVIS---HAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHL  134 (178)
Q Consensus        68 ~nv~v~~~~~--~~~~~~~~adlvIs---haG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~  134 (178)
                      .++.+.+..+  ++-..+..+|++.-   .+|++|++|+|.+|+|+|..+-...   -...-+..+...|+.
T Consensus       580 ~r~~f~~~~~~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~---~sR~~~s~l~~~gl~  648 (723)
T 4gyw_A          580 NRIIFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETL---ASRVAASQLTCLGCL  648 (723)
T ss_dssp             GGEEEEECCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSG---GGTHHHHHHHHHTCG
T ss_pred             CeEEECCCCCHHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCc---cHhHHHHHHHHcCCc
Confidence            5677777764  34466688999975   6788999999999999999885432   234566677777876

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=92.82  E-value=0.085  Score=46.60  Aligned_cols=92  Identities=11%  Similarity=0.170  Sum_probs=63.0

Q ss_pred             hhHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHH---HHH--HH-hCCCEEEeChhhHHHHHHccC
Q 042754           77 SSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSEL---AEE--LA-ARKHLYCAHPQSLHQVIAGMD  150 (178)
Q Consensus        77 ~~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~n---A~~--l~-~~G~~~~~~~~~L~~~i~~l~  150 (178)
                      +++.++|..||++||=-. +.+.|.+.+++|+|+.....    ++...   .-+  +. ....-++.+.++|.++|.+..
T Consensus       607 ~di~~ll~~aD~lITDyS-Sv~fD~~~l~kPiif~~~D~----~~Y~~~~rg~y~d~~~~~pg~~~~~~~eL~~~i~~~~  681 (729)
T 3l7i_A          607 NDVSELFLISDCLITDYS-SVMFDYGILKRPQFFFAYDI----DKYDKGLRGFYMNYMEDLPGPIYTEPYGLAKELKNLD  681 (729)
T ss_dssp             SCHHHHHHTCSEEEESSC-THHHHHGGGCCCEEEECTTT----TTTTSSCCSBSSCTTSSSSSCEESSHHHHHHHHTTHH
T ss_pred             cCHHHHHHHhCEEEeech-HHHHhHHhhCCCEEEecCCH----HHHhhccCCcccChhHhCCCCeECCHHHHHHHHhhhh
Confidence            468999999999999877 78999999999999986542    22211   000  01 111123458899999987763


Q ss_pred             c-------------ccCCCCCCCChh-HHHHHHHHhc
Q 042754          151 L-------------ESLLPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       151 ~-------------~~~~~~~~~~~~-~i~~~i~~~~  173 (178)
                      .             ...-+|.++.++ ++++.|.+..
T Consensus       682 ~~~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~~  718 (729)
T 3l7i_A          682 KVQQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKDI  718 (729)
T ss_dssp             HHHHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHhCCccCChHHHHHHHHHHhcC
Confidence            1             234456777887 9999987643

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=92.49  E-value=1.3  Score=33.67  Aligned_cols=71  Identities=15%  Similarity=0.245  Sum_probs=42.5

Q ss_pred             CcEEEEEeCC---------------ccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeC
Q 042754           11 KRIVFVTVGT---------------TCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTF   75 (178)
Q Consensus        11 ~~~ilVt~Gs---------------~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~   75 (178)
                      .++||||+|+               .|.  +-..+     .+.+...|. +|+++.|+....+.      .+..+.+.++
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~--mG~ai-----A~~~~~~Ga-~V~lv~~~~~~~~~------~~~~~~~~~v   68 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTGH--LGKII-----TETLLSAGY-EVCLITTKRALKPE------PHPNLSIREI   68 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCCH--HHHHH-----HHHHHHTTC-EEEEEECTTSCCCC------CCTTEEEEEC
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCCH--HHHHH-----HHHHHHCCC-EEEEEeCCcccccc------CCCCeEEEEH
Confidence            5789999994               332  22233     234456787 99999997643221      0123445554


Q ss_pred             h--hhHH----HHhhhccEEEecCCh
Q 042754           76 S--SSIA----DHLRSASLVISHAGS   95 (178)
Q Consensus        76 ~--~~~~----~~~~~adlvIshaG~   95 (178)
                      .  .+|.    ..+..+|++|+-||.
T Consensus        69 ~s~~em~~~v~~~~~~~Dili~aAAv   94 (232)
T 2gk4_A           69 TNTKDLLIEMQERVQDYQVLIHSMAV   94 (232)
T ss_dssp             CSHHHHHHHHHHHGGGCSEEEECSBC
T ss_pred             hHHHHHHHHHHHhcCCCCEEEEcCcc
Confidence            3  3333    345689999999984

>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*

Probab=89.21  E-value=4.4  Score=29.47  Aligned_cols=55  Identities=13%  Similarity=0.107  Sum_probs=36.6

Q ss_pred             HHhhhcc-EEEecCChHHHHHH-------------HHcCCCEEEEeCCC-CCCch--HHHHHHHHHhCCCEE
Q 042754           81 DHLRSAS-LVISHAGSGSIFET-------------LRHGKPLIVVVNED-LMDNH--QSELAEELAARKHLY  135 (178)
Q Consensus        81 ~~~~~ad-lvIshaG~~Ti~E~-------------l~~g~P~iviP~~~-~~~~~--Q~~nA~~l~~~G~~~  135 (178)
                      ++-.++| ++|.-+-++|+.-.             ++.++|.+++|-.. .+..|  -.+|-..|.+.|+-+
T Consensus        69 ~l~~~aD~~vIaPaTantlAKiA~GiaDnllt~~~la~~~pvvlaPamn~~m~~~p~~~~Nl~~L~~~G~~i  140 (181)
T 1g63_A           69 NIVENHEYILVLPASANTINKIANGICDNLLTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKNNDVKV  140 (181)
T ss_dssp             HHHHTCSEEEEEEECHHHHHHHHTTCCCSHHHHHHHHTGGGEEEEECCCHHHHTCHHHHHHHHHHHTTTCEE
T ss_pred             cccccCCEEEEecCCHHHHHHHHccccCcHHHHHHHHcCCCEEEEeCCChhhcCCHHHHHHHHHHHHCCCEE
Confidence            4467889 45777888877543             66789999999421 01111  135888899988764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=87.74  E-value=3.7  Score=29.78  Aligned_cols=85  Identities=18%  Similarity=0.301  Sum_probs=47.3

Q ss_pred             EEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChh---hHHHHhhhccE
Q 042754           13 IVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSS---SIADHLRSASL   88 (178)
Q Consensus        13 ~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~---~~~~~~~~adl   88 (178)
                      .||||+||.+.+ .+.+         .|...++ +|+...-....... .    ....+...+..+   ++...+..+|+
T Consensus         2 ~ilItGatG~iG~~l~~---------~L~~~g~-~V~~~~R~~~~~~~-~----~~~~~~~~D~~d~~~~~~~~~~~~d~   66 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLK---------SLSTTDY-QIYAGARKVEQVPQ-Y----NNVKAVHFDVDWTPEEMAKQLHGMDA   66 (219)
T ss_dssp             EEEEESTTSHHHHHHHH---------HHTTSSC-EEEEEESSGGGSCC-C----TTEEEEECCTTSCHHHHHTTTTTCSE
T ss_pred             eEEEECCCCHHHHHHHH---------HHHHCCC-EEEEEECCccchhh-c----CCceEEEecccCCHHHHHHHHcCCCE
Confidence            589999886443 2333         3344565 66655433221111 0    112333344443   46777889999


Q ss_pred             EEecCChH-------------HHHHHHH-cCCCEEEEe
Q 042754           89 VISHAGSG-------------SIFETLR-HGKPLIVVV  112 (178)
Q Consensus        89 vIshaG~~-------------Ti~E~l~-~g~P~iviP  112 (178)
                      ||+-+|..             .+.+++. .|++-++..
T Consensus        67 vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~  104 (219)
T 3dqp_A           67 IINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILL  104 (219)
T ss_dssp             EEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred             EEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEE
Confidence            99999954             2455543 566666543

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=87.55  E-value=1.4  Score=35.02  Aligned_cols=37  Identities=5%  Similarity=-0.111  Sum_probs=26.3

Q ss_pred             hHHHHhh--hccEEEec-CChHHHHHHHHcCCCEEEEeCC
Q 042754           78 SIADHLR--SASLVISH-AGSGSIFETLRHGKPLIVVVNE  114 (178)
Q Consensus        78 ~~~~~~~--~adlvIsh-aG~~Ti~E~l~~g~P~iviP~~  114 (178)
                      ++..++.  .-|+||++ .+.....-+-..|+|.+.+-+.
T Consensus       105 ~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~  144 (391)
T 3tsa_A          105 EYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWG  144 (391)
T ss_dssp             HHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCS
T ss_pred             HHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecC
Confidence            3445554  68999888 5555666777899999987543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=87.04  E-value=3.3  Score=31.11  Aligned_cols=76  Identities=17%  Similarity=0.183  Sum_probs=37.7

Q ss_pred             CCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEE--eCh--hhHHHHhh-
Q 042754           10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYF--TFS--SSIADHLR-   84 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~--~~~--~~~~~~~~-   84 (178)
                      ..+++|||+||.|.+.-   +     ...|.+.++ +|++ ++.+........ .....++..+  +..  .++..++. 
T Consensus         6 ~~k~~lVTGas~gIG~a---i-----a~~l~~~G~-~V~~-~~r~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~   74 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAA---V-----TRMLAQEGA-TVLG-LDLKPPAGEEPA-AELGAAVRFRNADVTNEADATAALAF   74 (257)
T ss_dssp             TTCEEEEESTTSHHHHH---H-----HHHHHHTTC-EEEE-EESSCC-------------CEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHH---H-----HHHHHHCCC-EEEE-EeCChHHHHHHH-HHhCCceEEEEccCCCHHHHHHHHHH
Confidence            45789999999866532   2     223455676 7655 454432111100 0011223332  332  12444444 


Q ss_pred             ------hccEEEecCChH
Q 042754           85 ------SASLVISHAGSG   96 (178)
Q Consensus        85 ------~adlvIshaG~~   96 (178)
                            ..|++|+-||..
T Consensus        75 ~~~~~g~id~lv~nAg~~   92 (257)
T 3tpc_A           75 AKQEFGHVHGLVNCAGTA   92 (257)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCCC
Confidence                  789999999953

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=86.35  E-value=1.3  Score=33.52  Aligned_cols=77  Identities=16%  Similarity=0.203  Sum_probs=42.1

Q ss_pred             CCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc--ccccCCcceEEEE--eCh--hhHHHHh
Q 042754           10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK--SLGEDGLMAVDYF--TFS--SSIADHL   83 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~--~~~~~~~~nv~v~--~~~--~~~~~~~   83 (178)
                      ..+++|||+||.|.+.-   +     .+.|.+.++ ++++.++.+......  ........++..+  +..  .++..++
T Consensus         3 ~~k~vlVTGas~gIG~a---i-----a~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   73 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKA---A-----AIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMF   73 (258)
T ss_dssp             CCCEEEESSCSSHHHHH---H-----HHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHH---H-----HHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            35789999999876532   2     223455676 888766765421110  0000112234433  322  2355556


Q ss_pred             hhc-------cEEEecCCh
Q 042754           84 RSA-------SLVISHAGS   95 (178)
Q Consensus        84 ~~a-------dlvIshaG~   95 (178)
                      ..+       |++|+-||.
T Consensus        74 ~~~~~~~g~id~lv~nAg~   92 (258)
T 3oid_A           74 QQIDETFGRLDVFVNNAAS   92 (258)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            554       999999984

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=86.16  E-value=4.6  Score=31.84  Aligned_cols=73  Identities=7%  Similarity=0.012  Sum_probs=38.0

Q ss_pred             CcEEEEEeCCccHH-HHHHHhccHHHHHHHHhC-CCCeEEEEEeCCCcccccccccCCcceEEEEeCh---hhHHHHhhh
Q 042754           11 KRIVFVTVGTTCFD-ALVKAVDTLEVKQELTRR-GYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS---SSIADHLRS   85 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~-~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~---~~~~~~~~~   85 (178)
                      .+.|||||||...+ .+.+.+         .+. ++ +|+...-..........  .....+...+..   ..+..++..
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L---------~~~~g~-~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~~d~~~~~~~~~~   91 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRI---------LETTDW-EVFGMDMQTDRLGDLVK--HERMHFFEGDITINKEWVEYHVKK   91 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHH---------HHHSSC-EEEEEESCCTTTGGGGG--STTEEEEECCTTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHH---------HhCCCC-EEEEEeCChhhhhhhcc--CCCeEEEeCccCCCHHHHHHHhcc
Confidence            36799999875333 343333         233 55 66665432221111100  011223333444   236678889


Q ss_pred             ccEEEecCCh
Q 042754           86 ASLVISHAGS   95 (178)
Q Consensus        86 adlvIshaG~   95 (178)
                      +|+||+-||.
T Consensus        92 ~d~Vih~A~~  101 (372)
T 3slg_A           92 CDVILPLVAI  101 (372)
T ss_dssp             CSEEEECBCC
T ss_pred             CCEEEEcCcc
Confidence            9999997774

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*

Probab=85.89  E-value=0.71  Score=40.86  Aligned_cols=36  Identities=17%  Similarity=0.074  Sum_probs=30.5

Q ss_pred             hHHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeC
Q 042754           78 SIADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVN  113 (178)
Q Consensus        78 ~~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~  113 (178)
                      ++.++|+.||++|.-+    -+.+.+||+++|+|.|+--.
T Consensus       511 d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~  550 (725)
T 3nb0_A          511 DYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNV  550 (725)
T ss_dssp             CHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred             HHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence            3789999999999865    45899999999999997543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=85.86  E-value=2.5  Score=30.79  Aligned_cols=69  Identities=17%  Similarity=0.191  Sum_probs=38.6

Q ss_pred             cEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEE--eCh--hhHHHHhhhc
Q 042754           12 RIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYF--TFS--SSIADHLRSA   86 (178)
Q Consensus        12 ~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~--~~~--~~~~~~~~~a   86 (178)
                      +.||||+||.+.+ .+.+         .|.+.++ +|+... .+......     ...++.++  +..  +++...+..+
T Consensus         5 ~~ilItGatG~iG~~l~~---------~L~~~g~-~V~~~~-r~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLN---------EALNRGF-EVTAVV-RHPEKIKI-----ENEHLKVKKADVSSLDEVCEVCKGA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHH---------HHHTTTC-EEEEEC-SCGGGCCC-----CCTTEEEECCCTTCHHHHHHHHTTC
T ss_pred             CEEEEEcCCchHHHHHHH---------HHHHCCC-EEEEEE-cCcccchh-----ccCceEEEEecCCCHHHHHHHhcCC
Confidence            6799999986443 2333         3344564 665543 33211111     11234333  443  2477888999


Q ss_pred             cEEEecCChH
Q 042754           87 SLVISHAGSG   96 (178)
Q Consensus        87 dlvIshaG~~   96 (178)
                      |+||+-+|..
T Consensus        69 d~vi~~a~~~   78 (227)
T 3dhn_A           69 DAVISAFNPG   78 (227)
T ss_dssp             SEEEECCCC-
T ss_pred             CEEEEeCcCC
Confidence            9999999864

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=85.79  E-value=1.2  Score=33.38  Aligned_cols=80  Identities=9%  Similarity=0.075  Sum_probs=40.6

Q ss_pred             CCCCCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEE--EEeCh--hhHHH
Q 042754            6 DSVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVD--YFTFS--SSIAD   81 (178)
Q Consensus         6 ~~~~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~--v~~~~--~~~~~   81 (178)
                      +.....+++|||+||.|.+.-   +     ...|...++ +|++ ++.+........ .....++.  ..+..  .++..
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~---~-----a~~l~~~G~-~V~~-~~r~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~   77 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSA---I-----ARLLHKLGS-KVII-SGSNEEKLKSLG-NALKDNYTIEVCNLANKEECSN   77 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHH---H-----HHHHHHTTC-EEEE-EESCHHHHHHHH-HHHCSSEEEEECCTTSHHHHHH
T ss_pred             cccCCCCEEEEECCCChHHHH---H-----HHHHHHCCC-EEEE-EcCCHHHHHHHH-HHhccCccEEEcCCCCHHHHHH
Confidence            344567899999999865532   1     223345675 6554 555432111000 00011233  23332  23555


Q ss_pred             Hhh---hccEEEecCChH
Q 042754           82 HLR---SASLVISHAGSG   96 (178)
Q Consensus        82 ~~~---~adlvIshaG~~   96 (178)
                      ++.   ..|++|+-||..
T Consensus        78 ~~~~~~~id~li~~Ag~~   95 (249)
T 3f9i_A           78 LISKTSNLDILVCNAGIT   95 (249)
T ss_dssp             HHHTCSCCSEEEECCC--
T ss_pred             HHHhcCCCCEEEECCCCC
Confidence            555   579999999964

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=85.69  E-value=0.94  Score=33.53  Aligned_cols=73  Identities=16%  Similarity=0.136  Sum_probs=40.1

Q ss_pred             CcEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcc-eEEEEeChhhHHHHhhhccE
Q 042754           11 KRIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLM-AVDYFTFSSSIADHLRSASL   88 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~-nv~v~~~~~~~~~~~~~adl   88 (178)
                      .++||||+||.+.+ .+.+.         |...++ +|++.. .+........  .... .+...+..+.+.+.+..+|+
T Consensus        21 ~~~ilVtGatG~iG~~l~~~---------L~~~G~-~V~~~~-R~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~D~   87 (236)
T 3e8x_A           21 GMRVLVVGANGKVARYLLSE---------LKNKGH-EPVAMV-RNEEQGPELR--ERGASDIVVANLEEDFSHAFASIDA   87 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHH---------HHHTTC-EEEEEE-SSGGGHHHHH--HTTCSEEEECCTTSCCGGGGTTCSE
T ss_pred             CCeEEEECCCChHHHHHHHH---------HHhCCC-eEEEEE-CChHHHHHHH--hCCCceEEEcccHHHHHHHHcCCCE
Confidence            56799999986544 33333         334565 666554 3321111000  0012 23333443456677889999


Q ss_pred             EEecCChH
Q 042754           89 VISHAGSG   96 (178)
Q Consensus        89 vIshaG~~   96 (178)
                      ||+-+|..
T Consensus        88 vi~~ag~~   95 (236)
T 3e8x_A           88 VVFAAGSG   95 (236)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999954

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=85.47  E-value=6.1  Score=30.64  Aligned_cols=77  Identities=12%  Similarity=0.168  Sum_probs=40.4

Q ss_pred             CCCCCCcEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEE--eChh--hHH
Q 042754            6 DSVSLKRIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYF--TFSS--SIA   80 (178)
Q Consensus         6 ~~~~~~~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~--~~~~--~~~   80 (178)
                      +.....++||||+||.+.+ .+.+.         |...++ +|++.. ........... .. .++.++  +..+  .+.
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~---------L~~~g~-~V~~~~-r~~~~~~~~~~-~l-~~v~~~~~Dl~d~~~~~   81 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEH---------WLPQGH-EILVID-NFATGKREVLP-PV-AGLSVIEGSVTDAGLLE   81 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHH---------HGGGTC-EEEEEE-CCSSSCGGGSC-SC-TTEEEEECCTTCHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHH---------HHHCCC-EEEEEE-CCCccchhhhh-cc-CCceEEEeeCCCHHHHH
Confidence            3334457899999986443 23333         344565 666543 32211110000 01 233333  3332  366


Q ss_pred             HHhh--hccEEEecCCh
Q 042754           81 DHLR--SASLVISHAGS   95 (178)
Q Consensus        81 ~~~~--~adlvIshaG~   95 (178)
                      .++.  .+|+||+-+|.
T Consensus        82 ~~~~~~~~D~vih~A~~   98 (330)
T 2pzm_A           82 RAFDSFKPTHVVHSAAA   98 (330)
T ss_dssp             HHHHHHCCSEEEECCCC
T ss_pred             HHHhhcCCCEEEECCcc
Confidence            7787  89999999984

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=84.84  E-value=3.1  Score=32.48  Aligned_cols=67  Identities=18%  Similarity=0.055  Sum_probs=36.8

Q ss_pred             CCcEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeCh--hhHHHHhhhc
Q 042754           10 LKRIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS--SSIADHLRSA   86 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~--~~~~~~~~~a   86 (178)
                      ..++|||||||...+ .+.+.         |...++ +|+...-....  .       ...+...+..  ..+..++..+
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~---------L~~~G~-~V~~~~r~~~~--~-------~~~~~~~Dl~d~~~~~~~~~~~   78 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAA---------LRTQGR-TVRGFDLRPSG--T-------GGEEVVGSLEDGQALSDAIMGV   78 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHH---------HHHTTC-CEEEEESSCCS--S-------CCSEEESCTTCHHHHHHHHTTC
T ss_pred             CCCEEEEECCCChHHHHHHHH---------HHhCCC-EEEEEeCCCCC--C-------CccEEecCcCCHHHHHHHHhCC
Confidence            456899999976433 33333         344565 66655322211  0       1123333443  2477888999


Q ss_pred             cEEEecCCh
Q 042754           87 SLVISHAGS   95 (178)
Q Consensus        87 dlvIshaG~   95 (178)
                      |+||+-||.
T Consensus        79 d~vih~A~~   87 (347)
T 4id9_A           79 SAVLHLGAF   87 (347)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999998874

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=84.81  E-value=3.5  Score=30.47  Aligned_cols=87  Identities=8%  Similarity=0.104  Sum_probs=47.2

Q ss_pred             CcEEEEEeCCccHHH-HHHHhccHHHHHHHHhCC-CCeEEEEEeCCCcccccccccCCcceEEE--EeCh--hhHHHHhh
Q 042754           11 KRIVFVTVGTTCFDA-LVKAVDTLEVKQELTRRG-YTHLLIQMGRGTYVPTKSLGEDGLMAVDY--FTFS--SSIADHLR   84 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~~-l~~~~~~~~~~~~l~~~~-~~~vvv~~G~~~~~~~~~~~~~~~~nv~v--~~~~--~~~~~~~~   84 (178)
                      .++||||+||.+.+. +.+         .|...+ + +|++ +..+.......    ...++.+  .+..  +++..++.
T Consensus        23 mk~vlVtGatG~iG~~l~~---------~L~~~G~~-~V~~-~~R~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~   87 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVIN---------QLADKQTI-KQTL-FARQPAKIHKP----YPTNSQIIMGDVLNHAALKQAMQ   87 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHH---------HHTTCTTE-EEEE-EESSGGGSCSS----CCTTEEEEECCTTCHHHHHHHHT
T ss_pred             ccEEEEEeCCcHHHHHHHH---------HHHhCCCc-eEEE-EEcChhhhccc----ccCCcEEEEecCCCHHHHHHHhc
Confidence            457999999875542 333         334455 4 5544 44432211111    1123333  3443  34778889


Q ss_pred             hccEEEecCChH-------HHHHHH-HcCCCEEEEe
Q 042754           85 SASLVISHAGSG-------SIFETL-RHGKPLIVVV  112 (178)
Q Consensus        85 ~adlvIshaG~~-------Ti~E~l-~~g~P~iviP  112 (178)
                      .+|+||+-+|..       .+.+++ ..|++-|+.-
T Consensus        88 ~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~i  123 (236)
T 3qvo_A           88 GQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFV  123 (236)
T ss_dssp             TCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEE
Confidence            999999888852       234444 4576656543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=84.53  E-value=1.2  Score=33.40  Aligned_cols=81  Identities=17%  Similarity=0.194  Sum_probs=40.5

Q ss_pred             CCCCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc--ccccCCcceEEEE--eCh--hhHH
Q 042754            7 SVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK--SLGEDGLMAVDYF--TFS--SSIA   80 (178)
Q Consensus         7 ~~~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~--~~~~~~~~nv~v~--~~~--~~~~   80 (178)
                      .....+++|||+||.|.+.-   +     ...|...++ ++++.++.+......  ........++..+  +..  +++.
T Consensus         9 ~~~~~k~vlITGas~giG~~---i-----a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   79 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTS---I-----CQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTK   79 (256)
T ss_dssp             ----CEEEEETTTTSHHHHH---H-----HHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHH---H-----HHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHH
Confidence            34457899999999876532   1     223345676 777766554321111  0000011233332  222  1244


Q ss_pred             HHhh-------hccEEEecCChH
Q 042754           81 DHLR-------SASLVISHAGSG   96 (178)
Q Consensus        81 ~~~~-------~adlvIshaG~~   96 (178)
                      .++.       ..|++|+.||..
T Consensus        80 ~~~~~~~~~~g~id~lv~~Ag~~  102 (256)
T 3ezl_A           80 QAFDKVKAEVGEIDVLVNNAGIT  102 (256)
T ss_dssp             HHHHHHHHHTCCEEEEEECCCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCCC
Confidence            4444       569999999953

>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}

Probab=84.45  E-value=2.6  Score=30.25  Aligned_cols=35  Identities=14%  Similarity=0.402  Sum_probs=28.2

Q ss_pred             hhHHHHhhhccEEEe--cC---ChHHHHHH---HHcCCCEEEEe
Q 042754           77 SSIADHLRSASLVIS--HA---GSGSIFET---LRHGKPLIVVV  112 (178)
Q Consensus        77 ~~~~~~~~~adlvIs--ha---G~~Ti~E~---l~~g~P~iviP  112 (178)
                      .|+ ..|..||+||.  .+   -.||.+|.   .+.|+|++++-
T Consensus        62 ~D~-~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~  104 (162)
T 3ehd_A           62 ADT-ENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALY  104 (162)
T ss_dssp             HHH-HHHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEEC
T ss_pred             HHH-HHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence            354 67899999998  33   48999996   78999999873

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=83.91  E-value=6.5  Score=27.77  Aligned_cols=69  Identities=12%  Similarity=0.184  Sum_probs=38.2

Q ss_pred             cEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEE--EeCh--hhHHHHhhhc
Q 042754           12 RIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDY--FTFS--SSIADHLRSA   86 (178)
Q Consensus        12 ~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v--~~~~--~~~~~~~~~a   86 (178)
                      ++|+||+||.+.+ .+.+.         |.+.++ ++++..-........     ...++++  .+..  +++...+..+
T Consensus         4 ~~ilVtGatG~iG~~l~~~---------l~~~g~-~V~~~~r~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~   68 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQ---------AVQAGY-EVTVLVRDSSRLPSE-----GPRPAHVVVGDVLQAADVDKTVAGQ   68 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHH---------HHHTTC-EEEEEESCGGGSCSS-----SCCCSEEEESCTTSHHHHHHHHTTC
T ss_pred             CEEEEEcCCcHHHHHHHHH---------HHHCCC-eEEEEEeChhhcccc-----cCCceEEEEecCCCHHHHHHHHcCC
Confidence            5799999876443 33333         334565 666554322111110     0123333  3433  2477888999


Q ss_pred             cEEEecCCh
Q 042754           87 SLVISHAGS   95 (178)
Q Consensus        87 dlvIshaG~   95 (178)
                      |+||+-+|.
T Consensus        69 d~vi~~a~~   77 (206)
T 1hdo_A           69 DAVIVLLGT   77 (206)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECccC
Confidence            999999884

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=83.88  E-value=3.6  Score=31.06  Aligned_cols=68  Identities=7%  Similarity=0.056  Sum_probs=38.2

Q ss_pred             cEEEEEeCCccHHH-HHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeCh--hhHHHHhhhccE
Q 042754           12 RIVFVTVGTTCFDA-LVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS--SSIADHLRSASL   88 (178)
Q Consensus        12 ~~ilVt~Gs~~~~~-l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~--~~~~~~~~~adl   88 (178)
                      ++||||+||.+.+. +.+.+         ...+. +|++ +.........     ....+...+..  .++..++..+|+
T Consensus         4 k~vlVTGasg~IG~~la~~L---------~~~G~-~V~~-~~r~~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~D~   67 (267)
T 3rft_A            4 KRLLVTGAAGQLGRVMRERL---------APMAE-ILRL-ADLSPLDPAG-----PNEECVQCDLADANAVNAMVAGCDG   67 (267)
T ss_dssp             EEEEEESTTSHHHHHHHHHT---------GGGEE-EEEE-EESSCCCCCC-----TTEEEEECCTTCHHHHHHHHTTCSE
T ss_pred             CEEEEECCCCHHHHHHHHHH---------HhcCC-EEEE-EecCCccccC-----CCCEEEEcCCCCHHHHHHHHcCCCE
Confidence            67999999875542 33333         34454 5544 4443221110     11223333433  247788899999


Q ss_pred             EEecCCh
Q 042754           89 VISHAGS   95 (178)
Q Consensus        89 vIshaG~   95 (178)
                      ||+-||.
T Consensus        68 vi~~Ag~   74 (267)
T 3rft_A           68 IVHLGGI   74 (267)
T ss_dssp             EEECCSC
T ss_pred             EEECCCC
Confidence            9999985

>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*

Probab=83.75  E-value=1.6  Score=31.39  Aligned_cols=35  Identities=23%  Similarity=0.341  Sum_probs=29.9

Q ss_pred             hhHHHHhhhccEEEe-----cCChHHHHHH---HHcCCCEEEEe
Q 042754           77 SSIADHLRSASLVIS-----HAGSGSIFET---LRHGKPLIVVV  112 (178)
Q Consensus        77 ~~~~~~~~~adlvIs-----haG~~Ti~E~---l~~g~P~iviP  112 (178)
                      .|+ ..+..||++|.     ..-.||.+|.   .+.|+|++.+.
T Consensus        74 ~D~-~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~  116 (167)
T 1s2d_A           74 NDL-TGISNATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILVP  116 (167)
T ss_dssp             HHH-HHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred             HHH-HHHHhCCEEEEECCCCCCCCCceeehhhHhhCCCeEEEEE
Confidence            455 66899999998     7789999996   77999999985

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=83.69  E-value=3.2  Score=31.08  Aligned_cols=74  Identities=9%  Similarity=0.081  Sum_probs=38.7

Q ss_pred             CCcEEEEEeCCccHHH-HHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEE--eCh--hhHHHHhh
Q 042754           10 LKRIVFVTVGTTCFDA-LVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYF--TFS--SSIADHLR   84 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~-l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~--~~~--~~~~~~~~   84 (178)
                      ..+++|||+||.|.+. +.+         .|...++ ++++. +.+........ .....++.++  +..  +++..++.
T Consensus        11 ~~k~vlVTGasggiG~~~a~---------~l~~~G~-~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~   78 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAE---------RLVGQGA-SAVLL-DLPNSGGEAQA-KKLGNNCVFAPADVTSEKDVQTALA   78 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHH---------HHHHTTC-EEEEE-ECTTSSHHHHH-HHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHH---------HHHHCCC-EEEEE-eCCcHhHHHHH-HHhCCceEEEEcCCCCHHHHHHHHH
Confidence            3578999999876542 332         3345575 76554 44322111000 0001233333  333  23555555


Q ss_pred             -------hccEEEecCCh
Q 042754           85 -------SASLVISHAGS   95 (178)
Q Consensus        85 -------~adlvIshaG~   95 (178)
                             ..|++|+-+|.
T Consensus        79 ~~~~~~g~id~li~~Ag~   96 (265)
T 2o23_A           79 LAKGKFGRVDVAVNCAGI   96 (265)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHCCCCCEEEECCcc
Confidence                   78999999985

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=83.66  E-value=5.8  Score=30.09  Aligned_cols=73  Identities=12%  Similarity=0.191  Sum_probs=38.4

Q ss_pred             CCCCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeCh--hhHHHHhh
Q 042754            7 SVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS--SSIADHLR   84 (178)
Q Consensus         7 ~~~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~--~~~~~~~~   84 (178)
                      .....+++|||+||.|.+.-   +     ...|.+.+. +|++ ++.+......      .......+..  .++..++.
T Consensus        10 ~~~~~k~vlVTGas~GIG~a---i-----a~~l~~~G~-~V~~-~~r~~~~~~~------~~~~~~~Dv~~~~~v~~~~~   73 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLA---V-----VDALVRYGA-KVVS-VSLDEKSDVN------VSDHFKIDVTNEEEVKEAVE   73 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHH---H-----HHHHHHTTC-EEEE-EESCC--CTT------SSEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHH---H-----HHHHHHCCC-EEEE-EeCCchhccC------ceeEEEecCCCHHHHHHHHH
Confidence            34457899999999876532   1     223345675 7655 4443221110      0111122332  12444443


Q ss_pred             -------hccEEEecCCh
Q 042754           85 -------SASLVISHAGS   95 (178)
Q Consensus        85 -------~adlvIshaG~   95 (178)
                             ..|++|+-||.
T Consensus        74 ~~~~~~g~iD~lv~nAg~   91 (269)
T 3vtz_A           74 KTTKKYGRIDILVNNAGI   91 (269)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCc
Confidence                   67999999995

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=83.48  E-value=12  Score=28.10  Aligned_cols=71  Identities=14%  Similarity=0.162  Sum_probs=41.0

Q ss_pred             CCcEEEEEeCC---------------ccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEe
Q 042754           10 LKRIVFVTVGT---------------TCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFT   74 (178)
Q Consensus        10 ~~~~ilVt~Gs---------------~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~   74 (178)
                      ..+++|||+|+               .|  .+-..+     .+.+...|+ +|+++.|+.....        +..+.+.+
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg--~iG~ai-----A~~~~~~Ga-~V~l~~~~~~l~~--------~~g~~~~d   70 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSG--KMGFAI-----AAAAARRGA-NVTLVSGPVSLPT--------PPFVKRVD   70 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCS--HHHHHH-----HHHHHHTTC-EEEEEECSCCCCC--------CTTEEEEE
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCcc--HHHHHH-----HHHHHHCCC-EEEEEECCccccc--------CCCCeEEc
Confidence            45789999994               22  233333     234456787 8988888653211        11233344


Q ss_pred             Ch--hhH----HHHhhhccEEEecCChH
Q 042754           75 FS--SSI----ADHLRSASLVISHAGSG   96 (178)
Q Consensus        75 ~~--~~~----~~~~~~adlvIshaG~~   96 (178)
                      ..  .+|    .+.+..+|++|+-||..
T Consensus        71 v~~~~~~~~~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           71 VMTALEMEAAVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             CCSHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred             cCcHHHHHHHHHHhcCCCCEEEECCccc
Confidence            32  223    23346799999999953

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=82.46  E-value=6.6  Score=29.62  Aligned_cols=68  Identities=18%  Similarity=0.308  Sum_probs=37.6

Q ss_pred             CCcEEEEEeCCccHHH-HHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEE--eChh--hHHHHhh
Q 042754           10 LKRIVFVTVGTTCFDA-LVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYF--TFSS--SIADHLR   84 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~-l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~--~~~~--~~~~~~~   84 (178)
                      ..+++|||+||.|.+. +.+         .|.+.++ +|++. +.+......       .++..+  +..+  ++..++.
T Consensus        27 ~~k~vlVTGas~gIG~aia~---------~l~~~G~-~V~~~-~r~~~~~~~-------~~~~~~~~Dv~d~~~v~~~~~   88 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVR---------AYRDRNY-RVVAT-SRSIKPSAD-------PDIHTVAGDISKPETADRIVR   88 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHH---------HHHHTTC-EEEEE-ESSCCCCSS-------TTEEEEESCTTSHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHH---------HHHHCCC-EEEEE-eCChhhccc-------CceEEEEccCCCHHHHHHHHH
Confidence            3578999999986653 322         3345675 76554 443221111       123322  3321  2444444


Q ss_pred             -------hccEEEecCCh
Q 042754           85 -------SASLVISHAGS   95 (178)
Q Consensus        85 -------~adlvIshaG~   95 (178)
                             ..|++|+-||.
T Consensus        89 ~~~~~~g~iD~lv~nAg~  106 (260)
T 3un1_A           89 EGIERFGRIDSLVNNAGV  106 (260)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHCCCCCEEEECCCC
Confidence                   68999999985

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=82.42  E-value=8.9  Score=30.36  Aligned_cols=36  Identities=19%  Similarity=0.286  Sum_probs=24.4

Q ss_pred             HHHHhh--hccEEEecCC-hHHHHHHHHcCCCEEEEeCC
Q 042754           79 IADHLR--SASLVISHAG-SGSIFETLRHGKPLIVVVNE  114 (178)
Q Consensus        79 ~~~~~~--~adlvIshaG-~~Ti~E~l~~g~P~iviP~~  114 (178)
                      +..++.  .-|+||+++. .+...-+...|+|.|.....
T Consensus       122 l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~  160 (412)
T 3otg_A          122 LQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVG  160 (412)
T ss_dssp             HHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCS
T ss_pred             HHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEeccc
Confidence            344444  6899999954 33445566789999987544

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=82.31  E-value=2.8  Score=32.14  Aligned_cols=75  Identities=24%  Similarity=0.286  Sum_probs=40.2

Q ss_pred             CCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEe--Ch--hhHHHHhh-
Q 042754           10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFT--FS--SSIADHLR-   84 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~--~~--~~~~~~~~-   84 (178)
                      ..+++|||+||.|.+.   .+     ...|...++ +|++ ++.+........ .....++..+.  ..  .++..++. 
T Consensus        15 ~gk~vlVTGas~gIG~---~~-----a~~L~~~G~-~V~~-~~r~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~v~~~~~~   83 (291)
T 3rd5_A           15 AQRTVVITGANSGLGA---VT-----ARELARRGA-TVIM-AVRDTRKGEAAA-RTMAGQVEVRELDLQDLSSVRRFADG   83 (291)
T ss_dssp             TTCEEEEECCSSHHHH---HH-----HHHHHHTTC-EEEE-EESCHHHHHHHH-TTSSSEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCEEEEeCCCChHHH---HH-----HHHHHHCCC-EEEE-EECCHHHHHHHH-HHhcCCeeEEEcCCCCHHHHHHHHHh
Confidence            4578999999976552   22     223455676 7655 454432111100 01123444433  32  23556665 


Q ss_pred             --hccEEEecCCh
Q 042754           85 --SASLVISHAGS   95 (178)
Q Consensus        85 --~adlvIshaG~   95 (178)
                        ..|++|+.||.
T Consensus        84 ~~~iD~lv~nAg~   96 (291)
T 3rd5_A           84 VSGADVLINNAGI   96 (291)
T ss_dssp             CCCEEEEEECCCC
T ss_pred             cCCCCEEEECCcC
Confidence              45999999995

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=81.87  E-value=3.2  Score=31.55  Aligned_cols=73  Identities=12%  Similarity=0.140  Sum_probs=38.1

Q ss_pred             CcEEEEEeCCccHHH-HHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEE--eCh--hhHHHHhh-
Q 042754           11 KRIVFVTVGTTCFDA-LVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYF--TFS--SSIADHLR-   84 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~~-l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~--~~~--~~~~~~~~-   84 (178)
                      .+++|||+||.|.+. +.+         .|...++ +|++ ++.+........ ...+.++..+  +..  .++..++. 
T Consensus         5 ~k~vlVTGas~gIG~~~a~---------~l~~~G~-~V~~-~~r~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~~~~~~~~   72 (281)
T 3m1a_A            5 AKVWLVTGASSGFGRAIAE---------AAVAAGD-TVIG-TARRTEALDDLV-AAYPDRAEAISLDVTDGERIDVVAAD   72 (281)
T ss_dssp             CCEEEETTTTSHHHHHHHH---------HHHHTTC-EEEE-EESSGGGGHHHH-HHCTTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHH---------HHHHCCC-EEEE-EeCCHHHHHHHH-HhccCCceEEEeeCCCHHHHHHHHHH
Confidence            578999999876553 322         3345675 6655 444332111100 0011233333  332  22445554 


Q ss_pred             ------hccEEEecCCh
Q 042754           85 ------SASLVISHAGS   95 (178)
Q Consensus        85 ------~adlvIshaG~   95 (178)
                            ..|++|+-||.
T Consensus        73 ~~~~~g~id~lv~~Ag~   89 (281)
T 3m1a_A           73 VLARYGRVDVLVNNAGR   89 (281)
T ss_dssp             HHHHHSCCSEEEECCCC
T ss_pred             HHHhCCCCCEEEECCCc
Confidence                  57999999994

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=81.87  E-value=2.2  Score=32.42  Aligned_cols=77  Identities=16%  Similarity=0.146  Sum_probs=41.3

Q ss_pred             CCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc--ccccCCcceEEEE--eCh--hhHHHHh
Q 042754           10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK--SLGEDGLMAVDYF--TFS--SSIADHL   83 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~--~~~~~~~~nv~v~--~~~--~~~~~~~   83 (178)
                      ..+++|||+||.|.+.-   +     .+.|.+.++ ++++..+.+......  ........++.++  +..  .++..++
T Consensus        25 ~~k~vlITGas~gIG~a---~-----a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   95 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAA---V-----CRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMF   95 (272)
T ss_dssp             CSCEEEETTTTSHHHHH---H-----HHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHH---H-----HHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            45789999998876532   2     223455676 887766655321111  0000112344433  322  2244444


Q ss_pred             h-------hccEEEecCCh
Q 042754           84 R-------SASLVISHAGS   95 (178)
Q Consensus        84 ~-------~adlvIshaG~   95 (178)
                      .       ..|++|+-||.
T Consensus        96 ~~~~~~~g~id~li~nAg~  114 (272)
T 4e3z_A           96 SAVDRQFGRLDGLVNNAGI  114 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHhCCCCCEEEECCCC
Confidence            4       56999999985

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=81.72  E-value=4.6  Score=31.84  Aligned_cols=28  Identities=14%  Similarity=0.199  Sum_probs=21.4

Q ss_pred             hccEEEec--CChHHHHHHHHcCCCEEEEe
Q 042754           85 SASLVISH--AGSGSIFETLRHGKPLIVVV  112 (178)
Q Consensus        85 ~adlvIsh--aG~~Ti~E~l~~g~P~iviP  112 (178)
                      ..|+||++  .+.....-+-..|+|.+.+-
T Consensus       102 ~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~  131 (402)
T 3ia7_A          102 PPDLVVYDVFPFIAGRLLAARWDRPAVRLT  131 (402)
T ss_dssp             CCSEEEEESTTHHHHHHHHHHHTCCEEEEE
T ss_pred             CCCEEEECchHHHHHHHHHHhhCCCEEEEe
Confidence            57999988  45555566778999999874

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=81.62  E-value=7.6  Score=31.50  Aligned_cols=122  Identities=15%  Similarity=0.080  Sum_probs=67.9

Q ss_pred             CcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChh--hHHHHhhhccE
Q 042754           11 KRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSS--SIADHLRSASL   88 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~--~~~~~~~~adl   88 (178)
                      .++|+|.+|++-...+.         .++++.++ +++++. ... .+... ... .....+.+|.+  .+.++...+|+
T Consensus        24 ~~~I~ilGgG~lg~~l~---------~aa~~lG~-~v~~~d-~~~-~p~~~-~ad-~~~~~~~~~~d~~~l~~~a~~~d~   89 (403)
T 3k5i_A           24 SRKVGVLGGGQLGRMLV---------ESANRLNI-QVNVLD-ADN-SPAKQ-ISA-HDGHVTGSFKEREAVRQLAKTCDV   89 (403)
T ss_dssp             CCEEEEECCSHHHHHHH---------HHHHHHTC-EEEEEE-STT-CTTGG-GCC-SSCCEESCTTCHHHHHHHHTTCSE
T ss_pred             CCEEEEECCCHHHHHHH---------HHHHHCCC-EEEEEE-CCC-CcHHH-hcc-ccceeecCCCCHHHHHHHHHhCCE
Confidence            46799998886333332         34455687 888777 422 12211 000 01234455643  36777888999


Q ss_pred             EEe---cCChHHHHHHHHcCCCEEEEeCCCCCC--chHHHHHHHHHhCCCEE-----Ee--ChhhHHHHHHcc
Q 042754           89 VIS---HAGSGSIFETLRHGKPLIVVVNEDLMD--NHQSELAEELAARKHLY-----CA--HPQSLHQVIAGM  149 (178)
Q Consensus        89 vIs---haG~~Ti~E~l~~g~P~iviP~~~~~~--~~Q~~nA~~l~~~G~~~-----~~--~~~~L~~~i~~l  149 (178)
                      ++.   +-+..++.++.. |+|  +.|.+....  .+-..--+.+++.|+-.     ..  +.+++.+++.++
T Consensus        90 i~~e~e~~~~~~l~~l~~-g~~--v~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~  159 (403)
T 3k5i_A           90 VTAEIEHVDTYALEEVAS-EVK--IEPSWQAIRTIQNKFNQKEHLRKYGIPMAEHRELVENTPAELAKVGEQL  159 (403)
T ss_dssp             EEESSSCSCHHHHHHHTT-TSE--ESSCHHHHHHHTSHHHHHHHHHTTTCCBCCEEEESSCCHHHHHHHHHHH
T ss_pred             EEECCCCCCHHHHHHHHc-CCc--cCcCHHHHHHhcCHHHHHHHHHHCCcCCCCEEEEcCCCHHHHHHHHHHh
Confidence            875   667665544444 888  346542111  22333345778888764     23  667777777665

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=81.50  E-value=3.2  Score=33.02  Aligned_cols=36  Identities=14%  Similarity=0.065  Sum_probs=24.4

Q ss_pred             HHHHhh--hccEEEec-CChHHHHHHHHcCCCEEEEeCC
Q 042754           79 IADHLR--SASLVISH-AGSGSIFETLRHGKPLIVVVNE  114 (178)
Q Consensus        79 ~~~~~~--~adlvIsh-aG~~Ti~E~l~~g~P~iviP~~  114 (178)
                      +..++.  ..|+||++ .+.....-+...|+|.+.+-..
T Consensus       115 l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~  153 (398)
T 4fzr_A          115 ALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIR  153 (398)
T ss_dssp             HHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCS
T ss_pred             HHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccC
Confidence            334444  38999986 4555566667899999986543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=81.50  E-value=12  Score=29.56  Aligned_cols=72  Identities=6%  Similarity=-0.048  Sum_probs=38.4

Q ss_pred             CcEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeCh--hhHHHHhhhcc
Q 042754           11 KRIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS--SSIADHLRSAS   87 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~--~~~~~~~~~ad   87 (178)
                      .++||||+||...+ .+.+.+         ...++ +|+...-.... ......  ....+...+..  ..+..++..+|
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L---------~~~g~-~V~~~~r~~~~-~~~~~~--~~v~~~~~Dl~d~~~~~~~~~~~d   95 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRL---------KHEGH-YVIASDWKKNE-HMTEDM--FCDEFHLVDLRVMENCLKVTEGVD   95 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHH---------HHTTC-EEEEEESSCCS-SSCGGG--TCSEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCeEEEECCccHHHHHHHHHH---------HHCCC-eEEEEECCCcc-chhhcc--CCceEEECCCCCHHHHHHHhCCCC
Confidence            46899999975433 333333         34565 76654432211 111000  11223333443  23677888999


Q ss_pred             EEEecCCh
Q 042754           88 LVISHAGS   95 (178)
Q Consensus        88 lvIshaG~   95 (178)
                      +||+-+|.
T Consensus        96 ~Vih~A~~  103 (379)
T 2c5a_A           96 HVFNLAAD  103 (379)
T ss_dssp             EEEECCCC
T ss_pred             EEEECcee
Confidence            99999884

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=81.37  E-value=4.3  Score=30.81  Aligned_cols=77  Identities=9%  Similarity=0.067  Sum_probs=39.3

Q ss_pred             CCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccc-cccCCcceEEEEeChh--hHHHHhh--
Q 042754           10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKS-LGEDGLMAVDYFTFSS--SIADHLR--   84 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~-~~~~~~~nv~v~~~~~--~~~~~~~--   84 (178)
                      ..+++|||+||.|.+.-   +     ...|.+.+. +|++ ++.+....... ............+..+  ++..++.  
T Consensus        10 ~~k~vlVTGas~gIG~a---i-----a~~l~~~G~-~V~~-~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   79 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLE---T-----SRVLARAGA-RVVL-ADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFT   79 (271)
T ss_dssp             TTCEEEEETTTSHHHHH---H-----HHHHHHTTC-EEEE-EECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHH---H-----HHHHHHCCC-EEEE-EcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHH
Confidence            46789999999876532   2     223455676 7655 45443211100 0000111222233332  2444444  


Q ss_pred             -----hccEEEecCChH
Q 042754           85 -----SASLVISHAGSG   96 (178)
Q Consensus        85 -----~adlvIshaG~~   96 (178)
                           ..|++|+.+|..
T Consensus        80 ~~~~g~id~lv~nAg~~   96 (271)
T 3tzq_B           80 IDTFGRLDIVDNNAAHS   96 (271)
T ss_dssp             HHHHSCCCEEEECCCCC
T ss_pred             HHHcCCCCEEEECCCCC
Confidence                 689999999954

>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1

Probab=80.68  E-value=14  Score=26.89  Aligned_cols=68  Identities=15%  Similarity=0.140  Sum_probs=41.3

Q ss_pred             HHhhhccEEE-ecCChHHHHHHHH---------cCCCEEEEeCCCCCCchHHHHHHHHHhCCCE---------EEeChhh
Q 042754           81 DHLRSASLVI-SHAGSGSIFETLR---------HGKPLIVVVNEDLMDNHQSELAEELAARKHL---------YCAHPQS  141 (178)
Q Consensus        81 ~~~~~adlvI-shaG~~Ti~E~l~---------~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~---------~~~~~~~  141 (178)
                      .++..||.+| --||.||+.|+..         +++|++++-...-. ++=...-+.+.+.|+.         +.-++++
T Consensus        93 ~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~-~~l~~~l~~~~~~Gfi~~~~~~~~~~~~~~~e  171 (191)
T 1t35_A           93 KMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYF-EPMMKMVKYSIQEGFSNESHLKLIHSSSRPDE  171 (191)
T ss_dssp             HHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTT-HHHHHHHHHHHHTTSSCTTHHHHEEEESSHHH
T ss_pred             HHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCccc-chHHHHHHHHHHCCCCCHHHcCeEEEeCCHHH
Confidence            3446788665 4677888877642         78999998532111 1112222567777743         2347888


Q ss_pred             HHHHHHcc
Q 042754          142 LHQVIAGM  149 (178)
Q Consensus       142 L~~~i~~l  149 (178)
                      +.+.+.+.
T Consensus       172 ~~~~l~~~  179 (191)
T 1t35_A          172 LIEQMQNY  179 (191)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHHHh
Confidence            88887764

>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*

Probab=80.45  E-value=2.5  Score=30.14  Aligned_cols=69  Identities=13%  Similarity=0.251  Sum_probs=44.3

Q ss_pred             hhHHHHhhhccEEEecC---ChHHHHHH---HHcCCCEEEEeCCCCCCchHHHHHHHHHhCCC-----EEEeChhhHHHH
Q 042754           77 SSIADHLRSASLVISHA---GSGSIFET---LRHGKPLIVVVNEDLMDNHQSELAEELAARKH-----LYCAHPQSLHQV  145 (178)
Q Consensus        77 ~~~~~~~~~adlvIsha---G~~Ti~E~---l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~-----~~~~~~~~L~~~  145 (178)
                      .++ .+|..||+||.-.   ..||.+|+   .+.|+|++++-...   .+-..|+. +.....     .+..+.++|...
T Consensus        70 ~d~-~~i~~aD~vva~~~~~d~Gt~~EiGyA~algKPVi~l~~~~---~~~~~n~M-~~g~~~~~~~~~~~y~~~el~~~  144 (165)
T 2khz_A           70 QDL-NWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQ---SGRVLSAM-IRGAADGSRFQVWDYAEGEVETM  144 (165)
T ss_dssp             HHH-HHHHHCSEEEEECSSCCHHHHHHHHHHHHTCSSEEEEECTT---TTCCCCHH-HHHTCCSSSEEEEECCTTTHHHH
T ss_pred             HHH-HHHHhCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEcCC---CCCcchhh-hcccCccceeEEEecCHHHHHHH
Confidence            344 7899999997654   78999996   77899999985432   11233444 333332     112377777777


Q ss_pred             HHccC
Q 042754          146 IAGMD  150 (178)
Q Consensus       146 i~~l~  150 (178)
                      |.+..
T Consensus       145 l~~~~  149 (165)
T 2khz_A          145 LDRYF  149 (165)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76653

>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*

Probab=80.30  E-value=5  Score=32.53  Aligned_cols=31  Identities=26%  Similarity=0.393  Sum_probs=23.6

Q ss_pred             hhccEEEecCChHHHHHHH-----Hc------------------CCCEEEEeCCC
Q 042754           84 RSASLVISHAGSGSIFETL-----RH------------------GKPLIVVVNED  115 (178)
Q Consensus        84 ~~adlvIshaG~~Ti~E~l-----~~------------------g~P~iviP~~~  115 (178)
                      ..||+||.=|| |+++.+.     .+                  ++|.|.||...
T Consensus        87 ~~~D~IIavGG-Gsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa  140 (383)
T 3ox4_A           87 NNSDFVISLGG-GSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTA  140 (383)
T ss_dssp             HTCSEEEEEES-HHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSS
T ss_pred             cCcCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCC
Confidence            46899999988 6666552     22                  89999999864

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=80.23  E-value=9.5  Score=29.40  Aligned_cols=72  Identities=15%  Similarity=0.037  Sum_probs=35.8

Q ss_pred             cEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeCh--hhHHHHhhhccE
Q 042754           12 RIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS--SSIADHLRSASL   88 (178)
Q Consensus        12 ~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~--~~~~~~~~~adl   88 (178)
                      .+||||+||...+ .+.+.+         ...++ +|++..-...... ...  .....+...+..  ..+..++..+|+
T Consensus        14 M~ilVtGatG~iG~~l~~~L---------~~~g~-~V~~~~r~~~~~~-~l~--~~~~~~~~~Dl~d~~~~~~~~~~~d~   80 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAI---------RAAGH-DLVLIHRPSSQIQ-RLA--YLEPECRVAEMLDHAGLERALRGLDG   80 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHH---------HHTTC-EEEEEECTTSCGG-GGG--GGCCEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CEEEEECCCcHHHHHHHHHH---------HHCCC-EEEEEecChHhhh-hhc--cCCeEEEEecCCCHHHHHHHHcCCCE
Confidence            4799999875433 333333         34565 7665543222111 100  001122333443  247778889999


Q ss_pred             EEecCChH
Q 042754           89 VISHAGSG   96 (178)
Q Consensus        89 vIshaG~~   96 (178)
                      ||+-+|..
T Consensus        81 vih~a~~~   88 (342)
T 2x4g_A           81 VIFSAGYY   88 (342)
T ss_dssp             EEEC----
T ss_pred             EEECCccC
Confidence            99998853

>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}

Probab=80.03  E-value=25  Score=29.37  Aligned_cols=32  Identities=25%  Similarity=0.364  Sum_probs=23.4

Q ss_pred             HHhhhccEEEe-cCChHHHHHHHH------------cCCCEEEEe
Q 042754           81 DHLRSASLVIS-HAGSGSIFETLR------------HGKPLIVVV  112 (178)
Q Consensus        81 ~~~~~adlvIs-haG~~Ti~E~l~------------~g~P~iviP  112 (178)
                      .++..||.+|. -||.||+-|.+.            .++|++++-
T Consensus       241 ~mv~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg  285 (460)
T 3bq9_A          241 AFVRCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILTG  285 (460)
T ss_dssp             HHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEE
T ss_pred             HHHHhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEEe
Confidence            44578887655 677899988732            489999883

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	178
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	99.92
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	99.87
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	99.83
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	99.83
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	99.79
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	99.77
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	99.71
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	99.68
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	98.3
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	98.04
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	97.92
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	97.4
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	97.3
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	97.27
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	96.95
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	96.71
d1rcua_	170	Hypothetical protein TM1055 {Thermotoga maritima [	96.0
d1t35a_	179	Hypothetical protein YvdD {Bacillus subtilis [TaxI	94.79
d1weka_	208	Hypothetical protein TT1465 (TTHA1644) {Thermus th	94.22
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	93.6
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	93.52
d1weha_	171	Hypothetical protein TT1887 (TTHA0294) {Thermus th	91.36
d2q4oa1	183	Hypothetical protein At2g37210/T2N18.3 {Thale cres	89.8
d1ydhb_	181	Hypothetical protein At5g11950 {Thale cress (Arabi	88.93
d1s2da_	167	Purine transdeoxyribosylase {Lactobacillus helveti	88.78
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	88.59
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	88.58
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	88.43
d1f8ya_	156	Nucleoside 2-deoxyribosyltransferase {Lactobacillu	88.38
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	87.87
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	87.78
d2f62a1	152	Nucleoside 2-deoxyribosyltransferase {Trypanosoma	87.18
d1kq3a_	364	Glycerol dehydrogenase {Thermotoga maritima [TaxId	87.01
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	86.9
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	85.93
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	84.84
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	83.86
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	82.87
d1u0ta_	302	Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob	82.67
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	82.29
d1p3y1_	183	MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}	81.95
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	80.68
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	80.61
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	80.56

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=2.4e-25  Score=177.48  Aligned_cols=161  Identities=20%  Similarity=0.179  Sum_probs=120.0

Q ss_pred             CCCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc-ccccCCcceEEEEeChhhHHHHhhhc
Q 042754            8 VSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK-SLGEDGLMAVDYFTFSSSIADHLRSA   86 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~-~~~~~~~~nv~v~~~~~~~~~~~~~a   86 (178)
                      ..+...+++++||+|...+.+.+  .+.+..+...  ...+++++........ ........++.+++|+++|.++|+.|
T Consensus       174 ~~~~~~i~~~~gs~g~~~~~~~~--~~~~~~l~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~lm~~a  249 (351)
T d1f0ka_         174 REGPVRVLVVGGSQGARILNQTM--PQVAAKLGDS--VTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWA  249 (351)
T ss_dssp             CCSSEEEEEECTTTCCHHHHHHH--HHHHHHHGGG--EEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHC
T ss_pred             ccCCcccccccccchhhhhHHHH--HHhhhhhccc--ceeeeeccccchhhhhhhhcccccccceeeeehhhHHHHHHhC
Confidence            34566788888899887777776  3344555432  2444444443321111 11112346789999999999999999


Q ss_pred             cEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccC-------cccC
Q 042754           87 SLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMD-------LESL  154 (178)
Q Consensus        87 dlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~-------~~~~  154 (178)
                      |++|||||++|++|++++|+|+|+||.+. .++||..||+++++.|+++.+     +++.|.++|.++.       +.++
T Consensus       250 dl~It~~G~~T~~Eal~~g~P~I~iP~~~-~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l~~~~~~~~~~~~  328 (351)
T d1f0ka_         250 DVVVCRSGALTVSEIAAAGLPALFVPFQH-KDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERA  328 (351)
T ss_dssp             SEEEECCCHHHHHHHHHHTCCEEECCCCC-TTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred             chhhccccchHHHHHHHhCCceeeeeccc-CCchHHHHHHHHHHCCCEEEechhhCCHHHHHHHHHhhCHHHHHHHHHHH
Confidence            99999999999999999999999999764 468999999999999999864     5788888888764       2345


Q ss_pred             CCCCCCChh-HHHHHHHHhc
Q 042754          155 LPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       155 ~~~~~~~~~-~i~~~i~~~~  173 (178)
                      +.+..++++ +|++.|+++.
T Consensus       329 ~~~~~~~~a~~i~~~i~~l~  348 (351)
T d1f0ka_         329 RAASIPDATERVANEVSRVA  348 (351)
T ss_dssp             HHTCCTTHHHHHHHHHHHHH
T ss_pred             HccCCccHHHHHHHHHHHHH
Confidence            667788888 9999999875

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.87  E-value=1.2e-21  Score=157.77  Aligned_cols=151  Identities=17%  Similarity=0.156  Sum_probs=114.0

Q ss_pred             CCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhccEE
Q 042754           10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLV   89 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~adlv   89 (178)
                      +++.|++++||.......+..  ..++..+...+. .+++..+.......     ..+.|+++.+|+| +.+++++||++
T Consensus       236 ~~~~v~~~~gs~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~v~~~~~~p-~~~ll~~~~~~  306 (401)
T d1rrva_         236 GSPPVHIGFGSSSGRGIADAA--KVAVEAIRAQGR-RVILSRGWTELVLP-----DDRDDCFAIDEVN-FQALFRRVAAV  306 (401)
T ss_dssp             SSCCEEECCTTCCSHHHHHHH--HHHHHHHHHTTC-CEEEECTTTTCCCS-----CCCTTEEEESSCC-HHHHGGGSSEE
T ss_pred             CCCeEEEECCccccCCHHHHH--HHHHHHHhhcCC-eEEEeccccccccc-----cCCCCEEEEeccC-cHHHhhhccEE
Confidence            457899999987543332222  222556666665 77777776543222     2357999999998 58999999999


Q ss_pred             EecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCcc-------cCCCC
Q 042754           90 ISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDLE-------SLLPY  157 (178)
Q Consensus        90 IshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~~-------~~~~~  157 (178)
                      |||||.||++|++++|+|+|++|..    .||..||+++++.|+|+.+     ++++|.++|++++..       ++...
T Consensus       307 I~hgG~~t~~Eal~~GvP~l~~P~~----~DQ~~na~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl~~~~r~~a~~~~~~  382 (401)
T d1rrva_         307 IHHGSAGTEHVATRAGVPQLVIPRN----TDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVLAPETRARAEAVAGM  382 (401)
T ss_dssp             EECCCHHHHHHHHHHTCCEEECCCS----BTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHHTSHHHHHHHHHHTTT
T ss_pred             EecCCchHHHHHHHhCCCEEEeccc----ccHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            9999999999999999999999985    5899999999999999753     789999999998632       22222


Q ss_pred             CCCChh-HHHHHHHHhc
Q 042754          158 QPGDAT-PVAKLINRFL  173 (178)
Q Consensus       158 ~~~~~~-~i~~~i~~~~  173 (178)
                      ...+.. +.++.|++.+
T Consensus       383 ~~~~g~~~aa~~ie~~~  399 (401)
T d1rrva_         383 VLTDGAAAAADLVLAAV  399 (401)
T ss_dssp             CCCCHHHHHHHHHHHHH
T ss_pred             HhhcCHHHHHHHHHHHh
Confidence            334666 9999998875

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.83  E-value=1.1e-20  Score=151.52  Aligned_cols=125  Identities=18%  Similarity=0.146  Sum_probs=98.3

Q ss_pred             CCcEEEEEeCCccH-HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhccE
Q 042754           10 LKRIVFVTVGTTCF-DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASL   88 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~-~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~adl   88 (178)
                      .++++++++|+... ....+.+     .+.+...+. .+++..|.......     ..+.|+++.+|+| +.++|+++|+
T Consensus       237 ~~~~i~~~~~~~~~~~~~~~~~-----~~al~~~~~-~~~~~~~~~~~~~~-----~~~~nv~~~~~~p-~~~~l~~~~~  304 (401)
T d1iira_         237 GPPPVYLGFGSLGAPADAVRVA-----IDAIRAHGR-RVILSRGWADLVLP-----DDGADCFAIGEVN-HQVLFGRVAA  304 (401)
T ss_dssp             SSCCEEEECC---CCHHHHHHH-----HHHHHHTTC-CEEECTTCTTCCCS-----SCGGGEEECSSCC-HHHHGGGSSE
T ss_pred             CCCeEEEccCccccchHHHHHH-----HHHHHHcCC-eEEEeccCCccccc-----cCCCCEEEEeccC-HHHHHhhcCE
Confidence            35678888887632 3344444     445566675 78888876543222     2467999999997 5899999999


Q ss_pred             EEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccC
Q 042754           89 VISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMD  150 (178)
Q Consensus        89 vIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~  150 (178)
                      +|||||+||++|++++|+|+|++|..    .||..||+++++.|+|+.+     |+++|.++|++++
T Consensus       305 ~V~hgG~~t~~Eal~~GvP~v~~P~~----~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l  367 (401)
T d1iira_         305 VIHHGGAGTTHVAARAGAPQILLPQM----ADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATAL  367 (401)
T ss_dssp             EEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHT
T ss_pred             EEecCCchHHHHHHHhCCCEEEcccc----ccHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999975    5899999999999999853     7899999999986

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.83  E-value=2.5e-20  Score=149.46  Aligned_cols=152  Identities=17%  Similarity=0.129  Sum_probs=112.8

Q ss_pred             CCcEEEEEeCCccH---HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhc
Q 042754           10 LKRIVFVTVGTTCF---DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSA   86 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~---~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~a   86 (178)
                      .++.++++.|+...   ..+.+.+     +..+...+. ++++..+.......     ..+.|+.+.+|+| +.++|++|
T Consensus       220 ~~~~v~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~-~~~~~~~~~~~~~~-----~~~~~v~i~~~~p-~~~ll~~a  287 (391)
T d1pn3a_         220 GSTPVYVGFGSSSRPATADAAKMA-----IKAVRASGR-RIVLSRGWADLVLP-----DDGADCFVVGEVN-LQELFGRV  287 (391)
T ss_dssp             SSCCEEEECTTCCSTHHHHHHHHH-----HHHHHHTTC-CEEEECTTTTCCCS-----SCCTTCCEESSCC-HHHHHTTS
T ss_pred             CCCeEEEeccccccccHHHHHHHH-----HHHHHhcCC-EEEEeccccccccc-----cCCCCEEEecccC-HHHHHhhc
Confidence            35678888887632   3444444     455666675 77777665433221     1357899999997 68999999


Q ss_pred             cEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe-----ChhhHHHHHHccCccc-------C
Q 042754           87 SLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA-----HPQSLHQVIAGMDLES-------L  154 (178)
Q Consensus        87 dlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~-----~~~~L~~~i~~l~~~~-------~  154 (178)
                      |++|||||+||++|++++|+|+|++|......+||..||+++++.|+|+.+     ++++|.++|++++...       +
T Consensus       288 ~~~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~r~~a~~~  367 (391)
T d1pn3a_         288 AAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTALAPEIRARATTV  367 (391)
T ss_dssp             SCEEEESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHHTSTTHHHHHHHH
T ss_pred             cEEEecCchHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCHHHHHHHHHH
Confidence            999999999999999999999999998753446799999999999999753     6889999999886321       1


Q ss_pred             CCCCCCChh-HHHHHHHHhc
Q 042754          155 LPYQPGDAT-PVAKLINRFL  173 (178)
Q Consensus       155 ~~~~~~~~~-~i~~~i~~~~  173 (178)
                      ..-...+.. +.++.|++++
T Consensus       368 a~~~~~~g~~~aa~~i~~~l  387 (391)
T d1pn3a_         368 ADTIRADGTTVAAQLLFDAV  387 (391)
T ss_dssp             GGGSCSCHHHHHHHHHHHHH
T ss_pred             HHHHHhcCHHHHHHHHHHHH
Confidence            111223555 8888888765

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=99.79  E-value=5.1e-19  Score=144.72  Aligned_cols=131  Identities=16%  Similarity=0.135  Sum_probs=98.3

Q ss_pred             CCCcEEEEEeCCcc--HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccc-cccCCcceEEEEeChhhHHHHh--
Q 042754            9 SLKRIVFVTVGTTC--FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKS-LGEDGLMAVDYFTFSSSIADHL--   83 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~--~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~-~~~~~~~nv~v~~~~~~~~~~~--   83 (178)
                      +.++.|++++||..  .....+.+     +..+...+. ++++..+......... .....+.|+.+.+|+|+ .+++  
T Consensus       263 ~~~~~v~~s~gs~~~~~~~~~~~~-----~~~~~~~~~-~vl~~~~~~~~~~l~~~~~~~~~~nv~~~~~~pq-~~lL~h  335 (450)
T d2c1xa1         263 KPTSVVYISFGTVTTPPPAEVVAL-----SEALEASRV-PFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQ-AEVLAH  335 (450)
T ss_dssp             CTTCEEEEECCSSCCCCHHHHHHH-----HHHHHHHTC-CEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCH-HHHHTS
T ss_pred             CccceeeecccccccCCHHHHHHH-----HHHHHhcCC-eEEEEECCCccccCChhhhhhccccccccccCCh-Hhhhcc
Confidence            45788999999863  23444444     334455565 8888776544322110 00113468999999987 5677  


Q ss_pred             hhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe-----ChhhHHHHHHccC
Q 042754           84 RSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-RKHLYCA-----HPQSLHQVIAGMD  150 (178)
Q Consensus        84 ~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-~G~~~~~-----~~~~L~~~i~~l~  150 (178)
                      ++++++|||||+||++|++++|||+|++|..    .||..||+++++ .|+|+.+     |+++|.++|.+++
T Consensus       336 p~~~~fItHGG~~s~~eal~~GvP~v~~P~~----~DQ~~na~rv~~~~G~G~~l~~~~~t~~~l~~ai~~vL  404 (450)
T d2c1xa1         336 EAVGAFVTHCGWNSLWESVAGGVPLICRPFF----GDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQIL  404 (450)
T ss_dssp             TTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHH
T ss_pred             CceeEEEccCCccHHHHHHHcCCCEEecccc----cchHHHHHHHHHHcCcEEEecCCCcCHHHHHHHHHHHh
Confidence            8999999999999999999999999999985    589999999987 6999854     7899999999885

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=99.77  E-value=1.7e-18  Score=141.56  Aligned_cols=131  Identities=13%  Similarity=0.058  Sum_probs=98.5

Q ss_pred             CCCcEEEEEeCCcc--HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccc-----cCCcceEEEEeChhhHHH
Q 042754            9 SLKRIVFVTVGTTC--FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLG-----EDGLMAVDYFTFSSSIAD   81 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~--~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~-----~~~~~nv~v~~~~~~~~~   81 (178)
                      ...+.++++.||.+  .....+.+     +..+...+. +++++++...........     ...+.|+.+..|+|+ .+
T Consensus       286 ~~~~~v~~~~gs~~~~~~~~~~~~-----~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~Pq-~~  358 (473)
T d2pq6a1         286 EPGSVVYVNFGSTTVMTPEQLLEF-----AWGLANCKK-SFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQ-DK  358 (473)
T ss_dssp             CTTCEEEEECCSSSCCCHHHHHHH-----HHHHHHTTC-EEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCH-HH
T ss_pred             CCCceeeeccCccccccHHHHHHH-----HHHHHhcCC-eEEEEEccCCcccccccCcccchhhccCceEEeeeCCH-HH
Confidence            45668899999863  23344444     345556664 898888765432211110     112469999999997 57


Q ss_pred             Hh--hhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEEe----ChhhHHHHHHccC
Q 042754           82 HL--RSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-RKHLYCA----HPQSLHQVIAGMD  150 (178)
Q Consensus        82 ~~--~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-~G~~~~~----~~~~L~~~i~~l~  150 (178)
                      ++  ++|+++|||||.||++|++++|||+|++|..    .||..||+++++ .|+|+.+    |.++|.++|++++
T Consensus       359 lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P~~----~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~ai~~vl  430 (473)
T d2pq6a1         359 VLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFF----ADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVI  430 (473)
T ss_dssp             HHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHH
T ss_pred             HhcCCcCcEEEecCCccHHHHHHHcCCCEEeccch----hhhHHHHHHHHHHcCeEEeeCCCcCHHHHHHHHHHHH
Confidence            77  8999999999999999999999999999986    589999999955 5999853    7899999999985

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=99.71  E-value=1.4e-17  Score=135.72  Aligned_cols=131  Identities=15%  Similarity=0.082  Sum_probs=90.8

Q ss_pred             CCcEEEEEeCCcc---HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccc-ccc-cccCCcceEEEEeChhhH-HHHh
Q 042754           10 LKRIVFVTVGTTC---FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVP-TKS-LGEDGLMAVDYFTFSSSI-ADHL   83 (178)
Q Consensus        10 ~~~~ilVt~Gs~~---~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~-~~~-~~~~~~~nv~v~~~~~~~-~~~~   83 (178)
                      ....++++.|+..   .....+.+     ...+...++ ++++..+...... ... .....+.|+.+..|.++- ...+
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~v~~~~pq~~~l~~  346 (461)
T d2acva1         273 DKSVVFLCFGSMGVSFGPSQIREI-----ALGLKHSGV-RFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAH  346 (461)
T ss_dssp             TTCEEEEECCSSCCCCCHHHHHHH-----HHHHHHHTC-EEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHS
T ss_pred             ccceeeeeccccccCCCHHHHHHH-----HHHHHhcCc-cEEEEeecccccCCccchhhhccCCCeEEEecCCHHHHHhc
Confidence            3455666666542   23344444     234444565 7777776654321 110 001134678888888642 2344


Q ss_pred             hhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHH-HhCCCEEE-----------eChhhHHHHHHccC
Q 042754           84 RSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEEL-AARKHLYC-----------AHPQSLHQVIAGMD  150 (178)
Q Consensus        84 ~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l-~~~G~~~~-----------~~~~~L~~~i~~l~  150 (178)
                      ++||++|||||+||++|++++|||+|++|..    .||..||+++ ++.|+|+.           .|.++|.++|++++
T Consensus       347 p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~----~DQ~~nA~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl  421 (461)
T d2acva1         347 KAIGGFVSHCGWNSILESMWFGVPILTWPIY----AEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLM  421 (461)
T ss_dssp             TTEEEEEECCCHHHHHHHHHTTCCEEECCCS----TTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHT
T ss_pred             ccCCEEEecCCccHHHHHHHcCCCEEeCCcc----cchHHHHHHHHHHhCceEEeeccccccCCccCHHHHHHHHHHHh
Confidence            9999999999999999999999999999986    5899999998 56798874           36789999999986

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.68  E-value=1.4e-16  Score=130.04  Aligned_cols=131  Identities=18%  Similarity=0.182  Sum_probs=94.1

Q ss_pred             CCCcEEEEEeCCcc--HHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccc------------------cccCCcc
Q 042754            9 SLKRIVFVTVGTTC--FDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKS------------------LGEDGLM   68 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~--~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~------------------~~~~~~~   68 (178)
                      ...+.+++++|+..  .......+     ...+...+. .+++..+.........                  .....+.
T Consensus       261 ~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~  334 (471)
T d2vcha1         261 PLGSVLYVSFGSGGTLTCEQLNEL-----ALGLADSEQ-RFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKR  334 (471)
T ss_dssp             CTTCEEEEECTTTCCCCHHHHHHH-----HHHHHHTTC-EEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTT
T ss_pred             CCccccccccccccCCCHHHHHHH-----HHHHHhhcC-CeEEEeccccccccccccccccccchhhhCCchhhhhccCC
Confidence            34567888999762  22333333     233344454 7777776533211000                  0012346


Q ss_pred             eEEEEeChhhHHHHh--hhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHh-CCCEEE--------e
Q 042754           69 AVDYFTFSSSIADHL--RSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAA-RKHLYC--------A  137 (178)
Q Consensus        69 nv~v~~~~~~~~~~~--~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~-~G~~~~--------~  137 (178)
                      |+.+.+|+|+ .++|  ++|+++|||||.||++|++.+|+|+|++|..    .||..||+++++ .|+|+.        .
T Consensus       335 nv~~~~w~Pq-~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~----~DQ~~nA~rv~e~lG~Gv~l~~~~~~~~  409 (471)
T d2vcha1         335 GFVIPFWAPQ-AQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLY----AEQKMNAVLLSEDIRAALRPRAGDDGLV  409 (471)
T ss_dssp             EEEEESCCCH-HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHTTCCEECCCCCTTSCC
T ss_pred             CeeecccCCH-HHHhcCccCCEEEecCCccHHHHHHHcCCCEEEcccc----cccHHHHHHHHHHheeEEEEecCCCCcC
Confidence            8999999997 5788  7899999999999999999999999999986    589999999965 699973        3


Q ss_pred             ChhhHHHHHHccC
Q 042754          138 HPQSLHQVIAGMD  150 (178)
Q Consensus       138 ~~~~L~~~i~~l~  150 (178)
                      +.++|.++|++++
T Consensus       410 t~~~l~~ai~~vl  422 (471)
T d2vcha1         410 RREEVARVVKGLM  422 (471)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHh
Confidence            7889999999885

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=98.30  E-value=2.2e-06  Score=65.95  Aligned_cols=128  Identities=16%  Similarity=0.212  Sum_probs=79.4

Q ss_pred             CCcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc--ccccCCcceEEEEeChhhHHHHh
Q 042754           10 LKRIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK--SLGEDGLMAVDYFTFSSSIADHL   83 (178)
Q Consensus        10 ~~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~--~~~~~~~~nv~v~~~~~~~~~~~   83 (178)
                      ..+.++++.|..    |...+++++..  +.+...  +. .++++.|........  ........++++.++.+++.++|
T Consensus       193 ~~~~~i~~~gr~~~~Kg~~~li~a~~~--l~~~~~--~~-~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~  267 (370)
T d2iw1a1         193 EQQNLLLQVGSDFGRKGVDRSIEALAS--LPESLR--HN-TLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELM  267 (370)
T ss_dssp             TTCEEEEEECSCTTTTTHHHHHHHHHT--SCHHHH--HT-EEEEEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHH
T ss_pred             ccceEEEEEeccccccchhhhcccccc--cccccc--cc-eeeecccccccccccccccccccccccccccccccccccc
Confidence            356678888865    45566665521  111111  22 455555544321111  00112346788888888999999


Q ss_pred             hhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEE-E---eChhhHHHHHHccC
Q 042754           84 RSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLY-C---AHPQSLHQVIAGMD  150 (178)
Q Consensus        84 ~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~-~---~~~~~L~~~i~~l~  150 (178)
                      +.||++|.-    +-.+++.|++++|+|+|+-....        ..+.+.+.+.|. .   .+++.|.++|.++.
T Consensus       268 ~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g--------~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll  334 (370)
T d2iw1a1         268 AAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCG--------YAHYIADANCGTVIAEPFSQEQLNEVLRKAL  334 (370)
T ss_dssp             HHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTST--------TTHHHHHHTCEEEECSSCCHHHHHHHHHHHH
T ss_pred             ccccccccccccccccceeeecccCCeeEEEeCCCC--------hHHHhcCCCceEEEcCCCCHHHHHHHHHHHH
Confidence            999999964    34589999999999999865432        223444544553 2   37889999998874

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=98.04  E-value=1.6e-05  Score=63.33  Aligned_cols=153  Identities=20%  Similarity=0.227  Sum_probs=96.1

Q ss_pred             CCCCcEEEEEeCCc-c---HHHHHHHhccHHHHHHHHh--CCCCeEEEEEeCCCccccc-ccccCCcceEEEEeChh--h
Q 042754            8 VSLKRIVFVTVGTT-C---FDALVKAVDTLEVKQELTR--RGYTHLLIQMGRGTYVPTK-SLGEDGLMAVDYFTFSS--S   78 (178)
Q Consensus         8 ~~~~~~ilVt~Gs~-~---~~~l~~~~~~~~~~~~l~~--~~~~~vvv~~G~~~~~~~~-~~~~~~~~nv~v~~~~~--~   78 (178)
                      .+.++.++||.-.. .   ...+.+.+      ..+..  ... .+++....+...... ........|+.+++..+  +
T Consensus       192 ~~~~~~~lvt~hr~~n~~~~~~~~~~~------~~~~~~~~~~-~~i~p~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  264 (373)
T d1v4va_         192 LPEGPYVTVTMHRRENWPLLSDLAQAL------KRVAEAFPHL-TFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGS  264 (373)
T ss_dssp             CCSSCEEEECCCCGGGGGGHHHHHHHH------HHHHHHCTTS-EEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred             cccccceeEEeccccccchHHHHHHHH------HHHhhhcccc-eeeeeecccccchhhhhhhhcccccceeeccchHHH
Confidence            34578899998743 1   22333332      22222  233 566555544321111 00111235777776653  4


Q ss_pred             HHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChhhHHHHHHccC------
Q 042754           79 IADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC--AHPQSLHQVIAGMD------  150 (178)
Q Consensus        79 ~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~--~~~~~L~~~i~~l~------  150 (178)
                      +-.+|..|++||+-+| +.+.||.++|+|+|.+....   ..|..  .   +.|..+.  .+++++.++++.++      
T Consensus       265 ~l~ll~~s~~vignSs-sgi~Ea~~lg~P~Inir~~~---eRqeg--~---~~g~nvlv~~d~~~I~~~i~~~l~~~~~~  335 (373)
T d1v4va_         265 MAALMRASLLLVTDSG-GLQEEGAALGVPVVVLRNVT---ERPEG--L---KAGILKLAGTDPEGVYRVVKGLLENPEEL  335 (373)
T ss_dssp             HHHHHHTEEEEEESCH-HHHHHHHHTTCCEEECSSSC---SCHHH--H---HHTSEEECCSCHHHHHHHHHHHHTCHHHH
T ss_pred             HHHHhhhceeEecccc-hhhhcchhhcCcEEEeCCCc---cCHHH--H---hcCeeEEcCCCHHHHHHHHHHHHcCHHHH
Confidence            6678999999999988 56889999999999875432   23542  2   3455443  47888888888763      


Q ss_pred             ---cccCCCCCCCChh-HHHHHHHHhcCCC
Q 042754          151 ---LESLLPYQPGDAT-PVAKLINRFLGFP  176 (178)
Q Consensus       151 ---~~~~~~~~~~~~~-~i~~~i~~~~~~~  176 (178)
                         ...-.+|.+++++ +|++.|.+.++..
T Consensus       336 ~~~~~~~npYGdG~as~rI~~~L~~~~~~~  365 (373)
T d1v4va_         336 SRMRKAKNPYGDGKAGLMVARGVAWRLGLG  365 (373)
T ss_dssp             HHHHHSCCSSCCSCHHHHHHHHHHHHTTSS
T ss_pred             hhcccCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence               1345689999999 9999999998754

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.92  E-value=7.3e-05  Score=52.21  Aligned_cols=77  Identities=18%  Similarity=0.203  Sum_probs=58.1

Q ss_pred             cceEEEEeChh--hHHHHhhhccEEEecC----ChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eC
Q 042754           67 LMAVDYFTFSS--SIADHLRSASLVISHA----GSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC--AH  138 (178)
Q Consensus        67 ~~nv~v~~~~~--~~~~~~~~adlvIsha----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~--~~  138 (178)
                      ..||++.+|++  ++.++|..||++|+-.    ...+++|++++|+|+|+-+..        ...+.+.....++.  .+
T Consensus        66 ~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~--------~~~e~i~~~~~g~~~~~d  137 (166)
T d2f9fa1          66 PDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEG--------GFKETVINEKTGYLVNAD  137 (166)
T ss_dssp             CTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSH--------HHHHHCCBTTTEEEECSC
T ss_pred             cCcEEEeecccccccccccccccccccccccccccccccccccccccceeecCC--------cceeeecCCcccccCCCC
Confidence            46899999985  4899999999999864    346999999999999986543        23344555555553  37


Q ss_pred             hhhHHHHHHccCc
Q 042754          139 PQSLHQVIAGMDL  151 (178)
Q Consensus       139 ~~~L~~~i~~l~~  151 (178)
                      ++++.++|.++..
T Consensus       138 ~~~~~~~i~~l~~  150 (166)
T d2f9fa1         138 VNEIIDAMKKVSK  150 (166)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            8899999998863

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=97.40  E-value=0.0001  Score=58.51  Aligned_cols=100  Identities=14%  Similarity=0.228  Sum_probs=70.2

Q ss_pred             cceEEEEeChh--hHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChhhH
Q 042754           67 LMAVDYFTFSS--SIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC--AHPQSL  142 (178)
Q Consensus        67 ~~nv~v~~~~~--~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~--~~~~~L  142 (178)
                      ..|+.+++..+  ++-.+|..|++||+-+|++ +-||..+|+|+|.+-...   ..|.  .   .+.|..+.  .+.+.+
T Consensus       255 ~~ni~~~~~l~~~~fl~llk~s~~vIgnSss~-i~Ea~~lg~P~Inir~~t---ERqe--~---~~~g~nilv~~~~~~I  325 (377)
T d1o6ca_         255 SDRVHLIEPLEVIDFHNFAAKSHFILTDSGGV-QEEAPSLGKPVLVLRDTT---ERPE--G---VEAGTLKLAGTDEENI  325 (377)
T ss_dssp             CSSEEECCCCCHHHHHHHHHHCSEEEEC--CH-HHHGGGGTCCEEEECSCC---C-----C---TTTTSSEEECSCHHHH
T ss_pred             ccceEeccccchHHHHHHHhhhheeecccchh-HHhhhhhhceEEEeCCCC---cCcc--h---hhcCeeEECCCCHHHH
Confidence            46888887764  4778899999999999966 789999999999874321   1232  2   14554432  477888


Q ss_pred             HHHHHccC---------cccCCCCCCCChh-HHHHHHHHhcCC
Q 042754          143 HQVIAGMD---------LESLLPYQPGDAT-PVAKLINRFLGF  175 (178)
Q Consensus       143 ~~~i~~l~---------~~~~~~~~~~~~~-~i~~~i~~~~~~  175 (178)
                      .+++..++         .....+|..++++ +|++.|.+.+++
T Consensus       326 ~~~i~~~l~~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~  368 (377)
T d1o6ca_         326 YQLAKQLLTDPDEYKKMSQASNPYGDGEASRRIVEELLFHYGY  368 (377)
T ss_dssp             HHHHHHHHHCHHHHHHHHHCCCTTCCSCHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHhChHHHhhhccCCCCCCCChHHHHHHHHHHHhhCc
Confidence            88887663         1234578898999 999999988775

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=97.30  E-value=0.00035  Score=49.79  Aligned_cols=73  Identities=15%  Similarity=0.048  Sum_probs=49.5

Q ss_pred             eEEEEeChh--hHHHHhhhccEEEe----cCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---Ch
Q 042754           69 AVDYFTFSS--SIADHLRSASLVIS----HAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---HP  139 (178)
Q Consensus        69 nv~v~~~~~--~~~~~~~~adlvIs----haG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~~  139 (178)
                      .+.+.++.+  ++..+|..||++|.    -+-.+++.|++++|+|+|+ +...       ...+.+ +.+.++..   ++
T Consensus        93 ~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~-~~~~-------~~~e~i-~~~~g~~~~~~~~  163 (196)
T d2bfwa1          93 VKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA-SAVG-------GLRDII-TNETGILVKAGDP  163 (196)
T ss_dssp             EEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEE-ESCH-------HHHHHC-CTTTCEEECTTCH
T ss_pred             eEEeeeccccccchhccccccccccccccccccccchhhhhcCceeee-cCCC-------ccceee-cCCceeeECCCCH
Confidence            344445553  58999999999994    4556899999999999997 3321       122323 33455543   67


Q ss_pred             hhHHHHHHccC
Q 042754          140 QSLHQVIAGMD  150 (178)
Q Consensus       140 ~~L~~~i~~l~  150 (178)
                      +.+.++|.++.
T Consensus       164 ~~l~~~i~~~l  174 (196)
T d2bfwa1         164 GELANAILKAL  174 (196)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            78888887754

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=97.27  E-value=0.00047  Score=54.08  Aligned_cols=74  Identities=15%  Similarity=0.032  Sum_probs=50.7

Q ss_pred             ceEEEEeChh--hHHHHhhhccEEEec----CChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEEe---C
Q 042754           68 MAVDYFTFSS--SIADHLRSASLVISH----AGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYCA---H  138 (178)
Q Consensus        68 ~nv~v~~~~~--~~~~~~~~adlvIsh----aG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~~---~  138 (178)
                      .++.+.++.+  ++..+++.||+++.-    +...++.|++++|+|.|.-..+    +    ..+.+. .+.|+..   +
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g----~----~~e~i~-~~~G~~~~~~d  379 (437)
T d2bisa1         309 NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----G----LRDIIT-NETGILVKAGD  379 (437)
T ss_dssp             TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCT----T----HHHHCC-TTTCEEECTTC
T ss_pred             cceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCCCCEEEeCCC----C----cHHhEE-CCcEEEECCCC
Confidence            3455555553  489999999999865    4557999999999999875432    2    222233 2344433   7


Q ss_pred             hhhHHHHHHccC
Q 042754          139 PQSLHQVIAGMD  150 (178)
Q Consensus       139 ~~~L~~~i~~l~  150 (178)
                      +++|.++|.+++
T Consensus       380 ~~~la~~i~~ll  391 (437)
T d2bisa1         380 PGELANAILKAL  391 (437)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            889999998764

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=96.95  E-value=0.001  Score=52.55  Aligned_cols=96  Identities=16%  Similarity=0.230  Sum_probs=67.3

Q ss_pred             cceEEEEeChh--hHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEeCCCCCCchHHHHHHHHHhCCCEEE--eChhhH
Q 042754           67 LMAVDYFTFSS--SIADHLRSASLVISHAGSGSIFETLRHGKPLIVVVNEDLMDNHQSELAEELAARKHLYC--AHPQSL  142 (178)
Q Consensus        67 ~~nv~v~~~~~--~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~~--~~~~~L  142 (178)
                      ..|+.+++-.+  ++-.++..|++||+-+|+ -+-||..+|+|+|.+-..    .+|..   .+ +.|..+.  .+.+++
T Consensus       262 ~~ni~~~~~l~~~~fl~ll~~a~~vignSss-gi~Ea~~lg~P~Inir~~----ter~~---~~-~~g~~i~v~~~~~~I  332 (376)
T d1f6da_         262 VKNVILIDPQEYLPFVWLMNHAWLILTDSGG-IQEEAPSLGKPVLVMRDT----TERPE---AV-TAGTVRLVGTDKQRI  332 (376)
T ss_dssp             CTTEEEECCCCHHHHHHHHHHCSEEEESSSG-GGGTGGGGTCCEEECSSC----CSCHH---HH-HHTSEEECCSSHHHH
T ss_pred             cccceeeccccHHHHHHHHhhceEEEecCcc-hHhhHHHhCCCEEEcCCC----ccCcc---ce-ecCeeEECCCCHHHH
Confidence            45787776543  366789999999999994 588999999999975221    12332   22 2344433  477888


Q ss_pred             HHHHHccC---------cccCCCCCCCChh-HHHHHHHH
Q 042754          143 HQVIAGMD---------LESLLPYQPGDAT-PVAKLINR  171 (178)
Q Consensus       143 ~~~i~~l~---------~~~~~~~~~~~~~-~i~~~i~~  171 (178)
                      .+++.+++         .....+|.+++++ +|++.|++
T Consensus       333 ~~ai~~~l~~~~~~~~~~~~~npYGdG~as~rI~~iLk~  371 (376)
T d1f6da_         333 VEEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALKN  371 (376)
T ss_dssp             HHHHHHHHHCHHHHHHHHHSCCTTCCSCHHHHHHHHHHH
T ss_pred             HHHHHHHHhChHhhhhhccCCCCCCCChHHHHHHHHHHh
Confidence            88887763         1234678888988 99999875

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.71  E-value=0.0016  Score=52.28  Aligned_cols=128  Identities=16%  Similarity=0.099  Sum_probs=71.0

Q ss_pred             CcEEEEEeCCc----cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc---ccccCCcceEEEEeChh--hHHH
Q 042754           11 KRIVFVTVGTT----CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK---SLGEDGLMAVDYFTFSS--SIAD   81 (178)
Q Consensus        11 ~~~ilVt~Gs~----~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~---~~~~~~~~nv~v~~~~~--~~~~   81 (178)
                      +..+++..|..    |.+.|.+++      ..+.+.+. ++++ .|.+......   ......+.++.+..+.+  ....
T Consensus       290 ~~~~i~~vgrl~~~KG~~~Ll~a~------~~~~~~~~-~l~~-~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  361 (477)
T d1rzua_         290 GSPLFCVISRLTWQKGIDLMAEAV------DEIVSLGG-RLVV-LGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHL  361 (477)
T ss_dssp             SSCEEEEESCBSTTTTHHHHHTTH------HHHHHTTC-EEEE-EECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHH
T ss_pred             CccEEEEEeeeeecCCcHHHHHHH------HHHHhhCC-eEEE-EecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHH
Confidence            34566778854    555565555      23334454 6544 4554321111   00012345676665553  3566


Q ss_pred             HhhhccEEEecC-----ChHHHHHHHHcCCCEEEEeCCCCCCchH---HHHHHHHHhCCCEEE---eChhhHHHHHHcc
Q 042754           82 HLRSASLVISHA-----GSGSIFETLRHGKPLIVVVNEDLMDNHQ---SELAEELAARKHLYC---AHPQSLHQVIAGM  149 (178)
Q Consensus        82 ~~~~adlvIsha-----G~~Ti~E~l~~g~P~iviP~~~~~~~~Q---~~nA~~l~~~G~~~~---~~~~~L~~~i~~l  149 (178)
                      +++.||++|.-+     | .+++||+++|+|.|+ ...... .+.   ..+...+...+.|+.   .+++.|.++|.++
T Consensus       362 ~~~~aD~~v~PS~~E~fg-lv~lEAma~G~PvVa-s~~GG~-~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~  437 (477)
T d1rzua_         362 MQAGCDAIIIPSRFEPCG-LTQLYALRYGCIPVV-ARTGGL-ADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRT  437 (477)
T ss_dssp             HHHHCSEEEECCSCCSSC-SHHHHHHHHTCEEEE-ESSHHH-HHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHH
T ss_pred             HHHhCccccCCccccCCC-HHHHHHHHcCCCEEE-cCCCCC-cceeecCCccccccCCCceEEeCCCCHHHHHHHHHHH
Confidence            889999999876     4 689999999999996 332100 000   011222223334443   3788898888765

>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TM1055
species: Thermotoga maritima [TaxId: 2336]

Probab=96.00  E-value=0.042  Score=38.21  Aligned_cols=36  Identities=33%  Similarity=0.484  Sum_probs=27.1

Q ss_pred             hHHHHhhhccEEEecCC-hHHHHH---HHHcCCCEEEEeC
Q 042754           78 SIADHLRSASLVISHAG-SGSIFE---TLRHGKPLIVVVN  113 (178)
Q Consensus        78 ~~~~~~~~adlvIshaG-~~Ti~E---~l~~g~P~iviP~  113 (178)
                      ....++..||.+|.-+| .||+.|   ++..++|.+++..
T Consensus        89 Rk~~m~~~sda~I~lPGG~GTl~El~~a~~l~KPiilln~  128 (170)
T d1rcua_          89 RSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRG  128 (170)
T ss_dssp             HHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred             hHHHHhhcccceeeeccccchHHHHHHHHHhCCceEEecC
Confidence            34466799998877665 888876   5678999998743

>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein YvdD
species: Bacillus subtilis [TaxId: 1423]

Probab=94.79  E-value=0.38  Score=33.33  Aligned_cols=69  Identities=16%  Similarity=0.121  Sum_probs=41.1

Q ss_pred             HHHHhhhccEEEe-cCChHHHHHHHHc---------CCCEEEEeCCCCCCchHHHHHHHHHhCCCEE---------EeCh
Q 042754           79 IADHLRSASLVIS-HAGSGSIFETLRH---------GKPLIVVVNEDLMDNHQSELAEELAARKHLY---------CAHP  139 (178)
Q Consensus        79 ~~~~~~~adlvIs-haG~~Ti~E~l~~---------g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~~---------~~~~  139 (178)
                      -..++..||.+|. -||.||+-|....         .+|++++-...-. +.=...-+.+.+.|+.-         +-++
T Consensus        91 k~~m~~~sdafI~lPGG~GTLdEl~e~l~~~ql~~~~kPiil~n~~gfw-~~l~~~l~~~~~~gfi~~~~~~~i~~~~~~  169 (179)
T d1t35a_          91 KAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYF-EPMMKMVKYSIQEGFSNESHLKLIHSSSRP  169 (179)
T ss_dssp             HHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTT-HHHHHHHHHHHHTTSSCTTHHHHEEEESSH
T ss_pred             HHHHHHhcCeEEEecCccchhhHHHHHHHHHHhhccCCCeEeecCCccH-HHHHHHHHHHHHcCCCChHHhCcEEEeCCH
Confidence            4455678897755 5778898887653         5899986432101 11223335666777532         3377


Q ss_pred             hhHHHHHHc
Q 042754          140 QSLHQVIAG  148 (178)
Q Consensus       140 ~~L~~~i~~  148 (178)
                      +++.+.|++
T Consensus       170 ~e~i~~L~~  178 (179)
T d1t35a_         170 DELIEQMQN  178 (179)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            777776653

>d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TT1465 (TTHA1644)
species: Thermus thermophilus [TaxId: 274]

Probab=94.22  E-value=0.59  Score=33.18  Aligned_cols=66  Identities=18%  Similarity=0.202  Sum_probs=38.7

Q ss_pred             HHHhhhcc-EEEecCChHHHHHHHH----------cCCCEEEEeCCCCCCchHHHHHHHHHhCCCE---------EEeCh
Q 042754           80 ADHLRSAS-LVISHAGSGSIFETLR----------HGKPLIVVVNEDLMDNHQSELAEELAARKHL---------YCAHP  139 (178)
Q Consensus        80 ~~~~~~ad-lvIshaG~~Ti~E~l~----------~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~---------~~~~~  139 (178)
                      ..++..|| +|+--||.||+.|...          ..+|+|++-..+.  +.-....+.+.+.|..         ++-++
T Consensus       122 ~~m~~~sDafI~lPGG~GTLdEl~e~lt~~ql~~~~~kPIil~~~gfw--~~l~~~l~~~~~~gfi~~~~~~~i~v~d~~  199 (208)
T d1weka_         122 VLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDRGYW--EGLVRWLAFLRDQKAVGPEDLQLFRLTDEP  199 (208)
T ss_dssp             HHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECHHHH--HHHHHHHHHHHHTTSSCTTGGGGSEEESCH
T ss_pred             HHHHhCCCceEEecCcchhHHHHHHHHHHHhccccCcCcccccCCcHH--HHHHHHHHHHHHCCCCChHHhCcEEEeCCH
Confidence            34567798 5566788899988743          3578887631110  1111233566666653         13477


Q ss_pred             hhHHHHHH
Q 042754          140 QSLHQVIA  147 (178)
Q Consensus       140 ~~L~~~i~  147 (178)
                      +++.+.|+
T Consensus       200 ee~i~~L~  207 (208)
T d1weka_         200 EEVVQALK  207 (208)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhh
Confidence            77777664

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=93.60  E-value=0.11  Score=39.02  Aligned_cols=96  Identities=8%  Similarity=0.104  Sum_probs=56.5

Q ss_pred             CCCcEEEEEeCCc-cH------HHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccccccc----CCcceEEEE-e--
Q 042754            9 SLKRIVFVTVGTT-CF------DALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGE----DGLMAVDYF-T--   74 (178)
Q Consensus         9 ~~~~~ilVt~Gs~-~~------~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~----~~~~nv~v~-~--   74 (178)
                      .+++.|++..|+. +.      +...+.      ++.+.+.+. ++++..|+.+.........    ....++.-+ +  
T Consensus       178 ~~~~~i~~~~~~~~~~~k~wp~~~~~~L------~~~l~~~~~-~ivl~g~~~e~~~~~~~~~~~~~~~~~~~~~l~g~~  250 (348)
T d1pswa_         178 SERPMIGFCPGAEFGPAKRWPHYHYAEL------AKQLIDEGY-QVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGET  250 (348)
T ss_dssp             SSSCEEEEECCCTTCGGGSCCHHHHHHH------HHHHHHTTC-EEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTS
T ss_pred             cCCCeEEeccccchhhccccchHHHhhh------HHHHhhcCC-ccccccccchHHHHHHHHHhhhcccccccccccCCc
Confidence            4577888888743 22      222222      345555565 6666555544221110000    001122211 1  


Q ss_pred             ChhhHHHHhhhccEEEecCChHHHHHHHHcCCCEEEEe
Q 042754           75 FSSSIADHLRSASLVISHAGSGSIFETLRHGKPLIVVV  112 (178)
Q Consensus        75 ~~~~~~~~~~~adlvIshaG~~Ti~E~l~~g~P~iviP  112 (178)
                      -+.++..++..||++|+.=+ |.+.-|.++|+|.|.+-
T Consensus       251 sl~el~~li~~a~l~I~~Dt-g~~HlAaa~g~p~i~lf  287 (348)
T d1pswa_         251 QLDQAVILIAACKAIVTNDS-GLMHVAAALNRPLVALY  287 (348)
T ss_dssp             CHHHHHHHHHTSSEEEEESS-HHHHHHHHTTCCEEEEE
T ss_pred             cHHHHHHHHhcceeEeecCc-cHHHHHHHcCCCEEEEE
Confidence            13468889999999999866 78999999999999984

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.52  E-value=0.074  Score=39.85  Aligned_cols=74  Identities=11%  Similarity=0.032  Sum_probs=36.5

Q ss_pred             CcEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhhHHHHhhhccEE
Q 042754           11 KRIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSSIADHLRSASLV   89 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~~~~~~~~adlv   89 (178)
                      |+.|||||||.-.+ .+.+.         |.+.++ +|+.+.-................++.+.... .+..++..+|+|
T Consensus         1 kKKIlVtG~sGfiG~~lv~~---------L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~d~V   69 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDK---------LMMDGH-EVTVVDNFFTGRKRNVEHWIGHENFELINHD-VVEPLYIEVDQI   69 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHH---------HHHTTC-EEEEEECCSSCCGGGTGGGTTCTTEEEEECC-TTSCCCCCCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHH---------HHHCcC-EEEEEeCCCcCCHHHHHHhcCCCceEEEehH-HHHHHHcCCCEE
Confidence            57899999874112 33333         344575 7766542111111110000112344444431 234556789999


Q ss_pred             EecCCh
Q 042754           90 ISHAGS   95 (178)
Q Consensus        90 IshaG~   95 (178)
                      ||-|+.
T Consensus        70 ihlAa~   75 (312)
T d2b69a1          70 YHLASP   75 (312)
T ss_dssp             EECCSC
T ss_pred             EECccc
Confidence            987753

>d1weha_ c.129.1.1 (A:) Hypothetical protein TT1887 (TTHA0294) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TT1887 (TTHA0294)
species: Thermus thermophilus [TaxId: 274]

Probab=91.36  E-value=0.69  Score=31.76  Aligned_cols=26  Identities=19%  Similarity=0.240  Sum_probs=19.9

Q ss_pred             HHHHhhhccEEEe-cCChHHHHHHHHc
Q 042754           79 IADHLRSASLVIS-HAGSGSIFETLRH  104 (178)
Q Consensus        79 ~~~~~~~adlvIs-haG~~Ti~E~l~~  104 (178)
                      ...++..||.+|. -||.||+-|.+..
T Consensus        91 k~~m~~~sda~I~lPGG~GTLdEl~e~  117 (171)
T d1weha_          91 IGRLLDLGAGYLALPGGVGTLAELVLA  117 (171)
T ss_dssp             HHHHHHHEEEEEECSCCHHHHHHHHHH
T ss_pred             HHHHHHcccceeecCCccchHHHHHHH
Confidence            4566789997665 5789999998665

>d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At2g37210/T2N18.3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.80  E-value=2.1  Score=29.42  Aligned_cols=78  Identities=15%  Similarity=0.209  Sum_probs=44.3

Q ss_pred             EEEEeCh-hhHHHHhhhccEEEe-cCChHHHHHHHH---------cCCCEEEEeCCCCCCchHHHHHHHHHhCCCE----
Q 042754           70 VDYFTFS-SSIADHLRSASLVIS-HAGSGSIFETLR---------HGKPLIVVVNEDLMDNHQSELAEELAARKHL----  134 (178)
Q Consensus        70 v~v~~~~-~~~~~~~~~adlvIs-haG~~Ti~E~l~---------~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~----  134 (178)
                      +..+... .....++..||.+|. -||.||+.|...         ..+|.+++-...-. +.=...-+.+.+.|+.    
T Consensus        86 ~~~~~~~~~Rk~~m~~~sdafIvlPGG~GTLdEl~e~lt~~ql~~~~kpiiiln~~gfw-~~l~~~l~~~~~~g~i~~~~  164 (183)
T d2q4oa1          86 VRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY-NSLLSFIDKAVEEGFISPTA  164 (183)
T ss_dssp             EEEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHHTSCCCCEEEECGGGTT-HHHHHHHHHHHHTTSSCHHH
T ss_pred             eeecccHHHHHHHHHHhCceEEEeCCcchhHHHHHHHHHHHHhcCCCCCeEEeecCccH-HHHHHHHHHHHHCCCCChHH
Confidence            3344433 335566788887755 567889888754         46888876432101 1112233556666753    


Q ss_pred             -----EEeChhhHHHHHHc
Q 042754          135 -----YCAHPQSLHQVIAG  148 (178)
Q Consensus       135 -----~~~~~~~L~~~i~~  148 (178)
                           ++-+++++.+.|++
T Consensus       165 ~~~~~~~d~~~e~~~~l~~  183 (183)
T d2q4oa1         165 REIIVSAPTAKELVKKLEE  183 (183)
T ss_dssp             HTTEEEESSHHHHHHHHHC
T ss_pred             cCcEEEcCCHHHHHHHHhC
Confidence                 23477777777653

>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At5g11950
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.93  E-value=2.4  Score=29.01  Aligned_cols=79  Identities=16%  Similarity=0.140  Sum_probs=44.0

Q ss_pred             eEEEEeCh-hhHHHHhhhccEEEe-cCChHHHHHHH---------HcCCCEEEEeCCCCCCchHHHHHHHHHhCCCE---
Q 042754           69 AVDYFTFS-SSIADHLRSASLVIS-HAGSGSIFETL---------RHGKPLIVVVNEDLMDNHQSELAEELAARKHL---  134 (178)
Q Consensus        69 nv~v~~~~-~~~~~~~~~adlvIs-haG~~Ti~E~l---------~~g~P~iviP~~~~~~~~Q~~nA~~l~~~G~~---  134 (178)
                      ++..++.. .....++..||.+|. -||.||+-|..         ...+|.+++-...-. +.=...-+.+.+.|+.   
T Consensus        81 ~~~~~~~~~~Rk~~m~~~sdafIvlPGG~GTLdEl~e~l~l~ql~~~~kpiiiln~~gfw-~~l~~~l~~~~~~g~i~~~  159 (181)
T d1ydhb_          81 DVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYY-NNLLALFDTGVEEGFIKPG  159 (181)
T ss_dssp             EEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTT-HHHHHHHHHHHHHTSSCHH
T ss_pred             cceeeccHHHHHHHHHHhCeeEEEeCCccchHHHHHHHHHHHHhcccCCCeEEEecCccH-HHHHHHHHHHHHCCCCCHH
Confidence            34444433 345677788997765 56778888774         366787766432111 1111222455555643   


Q ss_pred             ------EEeChhhHHHHHHc
Q 042754          135 ------YCAHPQSLHQVIAG  148 (178)
Q Consensus       135 ------~~~~~~~L~~~i~~  148 (178)
                            ++-+++++.+.|++
T Consensus       160 ~~~~~~~~d~~ee~~~~l~~  179 (181)
T d1ydhb_         160 ARNIVVSAPTAKELMEKMEE  179 (181)
T ss_dssp             HHTTEEEESSHHHHHHHHHH
T ss_pred             HcCeEEEeCCHHHHHHHHHh
Confidence                  23477777776654

>d1s2da_ c.23.14.1 (A:) Purine transdeoxyribosylase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: N-(deoxy)ribosyltransferase-like
family: N-deoxyribosyltransferase
domain: Purine transdeoxyribosylase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=88.78  E-value=0.28  Score=33.58  Aligned_cols=36  Identities=25%  Similarity=0.332  Sum_probs=28.8

Q ss_pred             hhHHHHhhhccEEEe-----cCChHHHHHH---HHcCCCEEEEeC
Q 042754           77 SSIADHLRSASLVIS-----HAGSGSIFET---LRHGKPLIVVVN  113 (178)
Q Consensus        77 ~~~~~~~~~adlvIs-----haG~~Ti~E~---l~~g~P~iviP~  113 (178)
                      .|+ ..|..||++|.     ....||.+|+   .+.|+|+|++..
T Consensus        74 ~D~-~~i~~sD~vIA~ldg~~~D~GTa~EiG~A~a~gKPvi~~~~  117 (167)
T d1s2da_          74 NDL-TGISNATCGVFLYDMDQLDDGSAFEIGFMRAMHKPVILVPF  117 (167)
T ss_dssp             HHH-HHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             HHH-HHHHHCCEEEEEeCCCCCCccHHHHHHHHHHCCCeEEEEec
Confidence            465 67899999986     3567999996   779999999853

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.59  E-value=0.44  Score=32.87  Aligned_cols=73  Identities=14%  Similarity=0.037  Sum_probs=37.5

Q ss_pred             CCcEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEE-EEeCCCcccccccccCCcceEEEEeCh--hhHHHHhhh
Q 042754           10 LKRIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLI-QMGRGTYVPTKSLGEDGLMAVDYFTFS--SSIADHLRS   85 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv-~~G~~~~~~~~~~~~~~~~nv~v~~~~--~~~~~~~~~   85 (178)
                      +-|+|||||||...+ .+.+.+         .+.+. ++.+ ....+........   ...++...++.  .++.+.+..
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~L---------l~~g~-~v~v~~~~R~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~   68 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKL---------KEGSD-KFVAKGLVRSAQGKEKIG---GEADVFIGDITDADSINPAFQG   68 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHH---------HHTTT-TCEEEEEESCHHHHHHTT---CCTTEEECCTTSHHHHHHHHTT
T ss_pred             CCCEEEEECCccHHHHHHHHHH---------HHCCC-cEEEEEEcCCHHHHHhcc---CCcEEEEeeecccccccccccc
Confidence            569999999975332 344444         23343 3322 2222221111000   11233333433  246677889


Q ss_pred             ccEEEecCCh
Q 042754           86 ASLVISHAGS   95 (178)
Q Consensus        86 adlvIshaG~   95 (178)
                      +|.||+-++.
T Consensus        69 ~d~vi~~a~~   78 (252)
T d2q46a1          69 IDALVILTSA   78 (252)
T ss_dssp             CSEEEECCCC
T ss_pred             ceeeEEEEee
Confidence            9999988763

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=88.58  E-value=0.32  Score=33.69  Aligned_cols=77  Identities=17%  Similarity=0.141  Sum_probs=43.7

Q ss_pred             CCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCccccc--cc-ccCCcceEEEEeC--hhhHHHHhh
Q 042754           10 LKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTK--SL-GEDGLMAVDYFTF--SSSIADHLR   84 (178)
Q Consensus        10 ~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~--~~-~~~~~~nv~v~~~--~~~~~~~~~   84 (178)
                      ..++++||+||.|.+.-.        ...|...+. ++++ ++.+...-..  .. .......+...+.  ..++.+.+.
T Consensus        22 ~gK~vlItGasgGIG~~i--------a~~la~~G~-~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   91 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRS--------AALLAGEGA-EVVL-CGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK   91 (191)
T ss_dssp             TTCEEEEETTTSHHHHHH--------HHHHHHTTC-EEEE-EESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT
T ss_pred             CCCEEEEECCCHHHHHHH--------HHHHHhhcc-chhh-cccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhc
Confidence            468999999988765332        123355675 6544 6765421110  00 0001112233332  246888999


Q ss_pred             hccEEEecCChH
Q 042754           85 SASLVISHAGSG   96 (178)
Q Consensus        85 ~adlvIshaG~~   96 (178)
                      .+|++|+-+|.+
T Consensus        92 ~iDilin~Ag~g  103 (191)
T d1luaa1          92 GAHFVFTAGAIG  103 (191)
T ss_dssp             TCSEEEECCCTT
T ss_pred             CcCeeeecCccc
Confidence            999999998863

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.43  E-value=2.1  Score=31.81  Aligned_cols=74  Identities=8%  Similarity=-0.011  Sum_probs=38.2

Q ss_pred             CCCCCcEEEEEeCCccH-HHHHHHhccHHHHHHHHhCCCCeEEEEEe-CCCcccccccccCCcceEEEEeCh--hhHHHH
Q 042754            7 SVSLKRIVFVTVGTTCF-DALVKAVDTLEVKQELTRRGYTHLLIQMG-RGTYVPTKSLGEDGLMAVDYFTFS--SSIADH   82 (178)
Q Consensus         7 ~~~~~~~ilVt~Gs~~~-~~l~~~~~~~~~~~~l~~~~~~~vvv~~G-~~~~~~~~~~~~~~~~nv~v~~~~--~~~~~~   82 (178)
                      +++....|||||||.-. ..+.+.         |.+.++ +|++..- +........    ...++...+..  .++...
T Consensus        11 ~~~~nMKILVTGgsGfIGs~lv~~---------L~~~g~-~V~~~d~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~   76 (363)
T d2c5aa1          11 WPSENLKISITGAGGFIASHIARR---------LKHEGH-YVIASDWKKNEHMTEDM----FCDEFHLVDLRVMENCLKV   76 (363)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHH---------HHHTTC-EEEEEESSCCSSSCGGG----TCSEEEECCTTSHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHH---------HHHCcC-EEEEEeCCCccchhhhc----ccCcEEEeechhHHHHHHH
Confidence            45566789999997411 233333         334565 7665532 221111111    12244444432  245566


Q ss_pred             hhhccEEEecCC
Q 042754           83 LRSASLVISHAG   94 (178)
Q Consensus        83 ~~~adlvIshaG   94 (178)
                      +..+|.||+-++
T Consensus        77 ~~~~d~Vih~a~   88 (363)
T d2c5aa1          77 TEGVDHVFNLAA   88 (363)
T ss_dssp             HTTCSEEEECCC
T ss_pred             hhcCCeEeeccc
Confidence            678999998663

>d1f8ya_ c.23.14.1 (A:) Nucleoside 2-deoxyribosyltransferase {Lactobacillus leichmannii [TaxId: 28039]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: N-(deoxy)ribosyltransferase-like
family: N-deoxyribosyltransferase
domain: Nucleoside 2-deoxyribosyltransferase
species: Lactobacillus leichmannii [TaxId: 28039]

Probab=88.38  E-value=0.29  Score=33.26  Aligned_cols=36  Identities=17%  Similarity=0.413  Sum_probs=28.6

Q ss_pred             hhHHHHhhhccEEEec-----CChHHHHHH---HHcCCCEEEEeC
Q 042754           77 SSIADHLRSASLVISH-----AGSGSIFET---LRHGKPLIVVVN  113 (178)
Q Consensus        77 ~~~~~~~~~adlvIsh-----aG~~Ti~E~---l~~g~P~iviP~  113 (178)
                      .|+ ..|..||+||..     .-.||.+|+   .+.|||+|++-.
T Consensus        70 ~D~-~~i~~aD~via~ldg~~~D~Gta~EiG~A~a~gKpvi~~~~  113 (156)
T d1f8ya_          70 NDL-NGIKTNDIMLGVYIPDEEDVGLGMELGYALSQGKYVLLVIP  113 (156)
T ss_dssp             HHH-HHHHTSSEEEEECCGGGCCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             HHH-HHHHHCCEEEEEeCCCCCCCCHHHHHHHHHHcCCcEEEEec
Confidence            465 668999999973     346999996   779999998853

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=87.87  E-value=1.9  Score=30.67  Aligned_cols=71  Identities=15%  Similarity=0.179  Sum_probs=42.5

Q ss_pred             CCcEEEEEeCCc-------------cHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeC-
Q 042754           10 LKRIVFVTVGTT-------------CFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTF-   75 (178)
Q Consensus        10 ~~~~ilVt~Gs~-------------~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~-   75 (178)
                      ..+.||||.|..             ..+.+-..+     .+++...|. .|.+++|+....+        +.++.+..+ 
T Consensus         5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~ai-----A~~~~~~Ga-~V~li~g~~~~~~--------p~~~~~~~~~   70 (223)
T d1u7za_           5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAI-----AAAAARRGA-NVTLVSGPVSLPT--------PPFVKRVDVM   70 (223)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHH-----HHHHHHTTC-EEEEEECSCCCCC--------CTTEEEEECC
T ss_pred             CCCEEEEECCCCcccCCCcceeccCCcHHHHHHH-----HHHHHHcCC-chhhhhcccccCc--------ccccccceeh
Confidence            356889999842             123454454     345556786 9999999876422        223444333 


Q ss_pred             -hhhHH----HHhhhccEEEecCC
Q 042754           76 -SSSIA----DHLRSASLVISHAG   94 (178)
Q Consensus        76 -~~~~~----~~~~~adlvIshaG   94 (178)
                       ..+|.    ..+..+|++|+-|=
T Consensus        71 t~~~m~~~~~~~~~~~D~~i~aAA   94 (223)
T d1u7za_          71 TALEMEAAVNASVQQQNIFIGCAA   94 (223)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCB
T ss_pred             hhHHHHHHHHhhhccceeEeeeec
Confidence             34444    34478998887543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.78  E-value=2.9  Score=28.50  Aligned_cols=72  Identities=11%  Similarity=0.138  Sum_probs=40.2

Q ss_pred             CcEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeCh--hhHHHHhhhcc
Q 042754           11 KRIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS--SSIADHLRSAS   87 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~--~~~~~~~~~ad   87 (178)
                      .+.|+|++||...+ .+.+.+         ...++ +++..+=.....+...   ....++...++.  +++.+.+..+|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~L---------l~~g~-~V~~~~R~~~~~~~~~---~~~~~~~~gD~~d~~~l~~al~~~d   69 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQA---------VQAGY-EVTVLVRDSSRLPSEG---PRPAHVVVGDVLQAADVDKTVAGQD   69 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHH---------HHTTC-EEEEEESCGGGSCSSS---CCCSEEEESCTTSHHHHHHHHTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHH---------HHCcC-EEEEEEcChhhccccc---ccccccccccccchhhHHHHhcCCC
Confidence            35699999986433 333333         23465 7766553211111111   112344444554  34778899999


Q ss_pred             EEEecCCh
Q 042754           88 LVISHAGS   95 (178)
Q Consensus        88 lvIshaG~   95 (178)
                      +||+-.|.
T Consensus        70 ~vi~~~g~   77 (205)
T d1hdoa_          70 AVIVLLGT   77 (205)
T ss_dssp             EEEECCCC
T ss_pred             EEEEEecc
Confidence            99998874

>d2f62a1 c.23.14.1 (A:9-160) Nucleoside 2-deoxyribosyltransferase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: N-(deoxy)ribosyltransferase-like
family: N-deoxyribosyltransferase
domain: Nucleoside 2-deoxyribosyltransferase
species: Trypanosoma brucei [TaxId: 5691]

Probab=87.18  E-value=0.36  Score=32.65  Aligned_cols=37  Identities=19%  Similarity=0.393  Sum_probs=30.2

Q ss_pred             hhHHHHhhhccEEEe--------cCChHHHHHH---HHcCCCEEEEeCC
Q 042754           77 SSIADHLRSASLVIS--------HAGSGSIFET---LRHGKPLIVVVNE  114 (178)
Q Consensus        77 ~~~~~~~~~adlvIs--------haG~~Ti~E~---l~~g~P~iviP~~  114 (178)
                      .|+ +.|..||+||.        .+-.||.+|+   .+.|||++.+...
T Consensus        52 ~d~-~~i~~~D~VIA~Ld~frg~~~D~GTa~EiG~A~algKPVi~~~~d   99 (152)
T d2f62a1          52 KNI-QMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFTSD   99 (152)
T ss_dssp             HHH-HHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             HHH-HHHHhCCEEEEEccccCCCCCCchHHHHHHHHHHCCCeEEEEecC
Confidence            465 77899999998        3568999996   7799999998643

>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Multi-domain proteins (alpha and beta)
fold: Dehydroquinate synthase-like
superfamily: Dehydroquinate synthase-like
family: Iron-containing alcohol dehydrogenase
domain: Glycerol dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.01  E-value=1.9  Score=32.54  Aligned_cols=74  Identities=16%  Similarity=0.162  Sum_probs=42.9

Q ss_pred             HhCCCCeEEEEEeCCCcc-----cccccccCCcceEEEEeCh---hhHHHHh----hhccEEEecCChHHHHHH-----H
Q 042754           40 TRRGYTHLLIQMGRGTYV-----PTKSLGEDGLMAVDYFTFS---SSIADHL----RSASLVISHAGSGSIFET-----L  102 (178)
Q Consensus        40 ~~~~~~~vvv~~G~~~~~-----~~~~~~~~~~~nv~v~~~~---~~~~~~~----~~adlvIshaG~~Ti~E~-----l  102 (178)
                      ++.+ .++++++|+....     ...........++.+++..   +.+..+.    ..+|+||.=|| ||++.+     +
T Consensus        27 ~~~g-~r~lvVt~~~~~~~~~~~~v~~~L~~~~i~~~v~~~~~~~~~i~~~~~~~~~~~D~IIavGG-Gs~~D~aK~ia~  104 (364)
T d1kq3a_          27 SRFG-ERAFVVIDDFVDKNVLGENFFSSFTKVRVNKQIFGGECSDEEIERLSGLVEEETDVVVGIGG-GKTLDTAKAVAY  104 (364)
T ss_dssp             HTTC-SEEEEEECHHHHHHTTCTTGGGGCSSSEEEEEECCSSCBHHHHHHHHTTCCTTCCEEEEEES-HHHHHHHHHHHH
T ss_pred             HHcC-CeEEEEECCchhhhHHHHHHHHHHHhcCCeEEecCCCCCcHHHHHHHHHhhccCcEEEEecc-Cccceeeccccc
Confidence            3446 3888888864321     1111111222334445444   2343332    45799999877 677665     5


Q ss_pred             HcCCCEEEEeCCC
Q 042754          103 RHGKPLIVVVNED  115 (178)
Q Consensus       103 ~~g~P~iviP~~~  115 (178)
                      ..++|.|.||...
T Consensus       105 ~~~~P~I~IPTTa  117 (364)
T d1kq3a_         105 KLKKPVVIVPTIA  117 (364)
T ss_dssp             HTTCCEEEEESSC
T ss_pred             cccccceeecccc
Confidence            6899999999864

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=86.90  E-value=0.95  Score=32.41  Aligned_cols=75  Identities=23%  Similarity=0.199  Sum_probs=37.7

Q ss_pred             CcEEEEEeCCccHHH-HHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEe--Chh--hHH---H-
Q 042754           11 KRIVFVTVGTTCFDA-LVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFT--FSS--SIA---D-   81 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~~-l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~--~~~--~~~---~-   81 (178)
                      .++||||+||.|.+. +.+         .|...+....|+.++.+...-... ......+++++.  ..+  ++.   + 
T Consensus         3 ~KtilITGassGIG~a~a~---------~la~~G~~~~Vi~~~R~~~~~~~l-~~~~~~~~~~~~~Dvs~~~~v~~~~~~   72 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQ---------QLVKDKNIRHIIATARDVEKATEL-KSIKDSRVHVLPLTVTCDKSLDTFVSK   72 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHH---------HHHTCTTCCEEEEEESSGGGCHHH-HTCCCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHH---------HHHHCCCCCEEEEEeCCHHHHHHH-HHhhCCceEEEEEecCCHHHHHHHHHH
Confidence            489999999987653 332         334455312455566654211111 011223444443  221  121   2 


Q ss_pred             ---Hhhh--ccEEEecCCh
Q 042754           82 ---HLRS--ASLVISHAGS   95 (178)
Q Consensus        82 ---~~~~--adlvIshaG~   95 (178)
                         .+..  -|++|..||.
T Consensus        73 i~~~~~~~~idilinnAG~   91 (250)
T d1yo6a1          73 VGEIVGSDGLSLLINNAGV   91 (250)
T ss_dssp             HHHHHGGGCCCEEEECCCC
T ss_pred             HHHHhCCCCeEEEEEcCcc
Confidence               2222  7999999995

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.93  E-value=0.64  Score=34.77  Aligned_cols=17  Identities=24%  Similarity=0.348  Sum_probs=12.2

Q ss_pred             HHHHhh--hccEEEecCCh
Q 042754           79 IADHLR--SASLVISHAGS   95 (178)
Q Consensus        79 ~~~~~~--~adlvIshaG~   95 (178)
                      +..++.  .+|+|||-|+.
T Consensus        66 l~~~~~~~~~d~VihlAa~   84 (347)
T d1z45a2          66 LEKVFKEYKIDSVIHFAGL   84 (347)
T ss_dssp             HHHHHHHSCCCEEEECCSC
T ss_pred             HHHHHhccCCCEEEEcccc
Confidence            555555  57999998874

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.84  E-value=1.9  Score=30.25  Aligned_cols=74  Identities=11%  Similarity=0.157  Sum_probs=38.7

Q ss_pred             CcEEEEEeCCccHH-HHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeCh--hhHHHHhhhcc
Q 042754           11 KRIVFVTVGTTCFD-ALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFS--SSIADHLRSAS   87 (178)
Q Consensus        11 ~~~ilVt~Gs~~~~-~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~--~~~~~~~~~ad   87 (178)
                      ++.|||||||.-.+ .+.+.+     +   .+..+.++++.+-+.........   ...++.+.++.  +++...+..+|
T Consensus        14 ~k~IlItGaTG~iG~~l~~~L-----l---~~g~~~~v~~~~R~~~~~~~~~~---~~i~~~~~D~~~~~~~~~~~~~~d   82 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEI-----L---EQGLFSKVTLIGRRKLTFDEEAY---KNVNQEVVDFEKLDDYASAFQGHD   82 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHH-----H---HHTCCSEEEEEESSCCCCCSGGG---GGCEEEECCGGGGGGGGGGGSSCS
T ss_pred             CCEEEEECCCcHHHHHHHHHH-----H---hCCCCCEEEEEecChhhhccccc---ceeeeeeecccccccccccccccc
Confidence            46799999985322 344433     1   22222245554432211111110   12334445554  35777789999


Q ss_pred             EEEecCCh
Q 042754           88 LVISHAGS   95 (178)
Q Consensus        88 lvIshaG~   95 (178)
                      .+|+.+|.
T Consensus        83 ~vi~~~~~   90 (232)
T d2bkaa1          83 VGFCCLGT   90 (232)
T ss_dssp             EEEECCCC
T ss_pred             cccccccc
Confidence            99998874

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=83.86  E-value=1.9  Score=32.27  Aligned_cols=19  Identities=21%  Similarity=0.212  Sum_probs=14.8

Q ss_pred             hhHHHHhhhc--cEEEecCCh
Q 042754           77 SSIADHLRSA--SLVISHAGS   95 (178)
Q Consensus        77 ~~~~~~~~~a--dlvIshaG~   95 (178)
                      .++...+..+  |.||+-|+.
T Consensus        68 ~~~~~~~~~~~~d~v~h~aa~   88 (357)
T d1db3a_          68 SNLTRILREVQPDEVYNLGAM   88 (357)
T ss_dssp             HHHHHHHHHHCCSEEEECCCC
T ss_pred             HHHHHHHhccCCCEEEEeecc
Confidence            3477788776  999999875

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.87  E-value=3.3  Score=30.11  Aligned_cols=17  Identities=12%  Similarity=0.130  Sum_probs=12.1

Q ss_pred             HHHHhh--hccEEEecCCh
Q 042754           79 IADHLR--SASLVISHAGS   95 (178)
Q Consensus        79 ~~~~~~--~adlvIshaG~   95 (178)
                      +...+.  ..|.|||.|+.
T Consensus        71 ~~~~~~~~~~D~Vih~Aa~   89 (339)
T d1n7ha_          71 LRRWIDVIKPDEVYNLAAQ   89 (339)
T ss_dssp             HHHHHHHHCCSEEEECCSC
T ss_pred             HHHHHhhhccchhhhcccc
Confidence            555554  45999999985

>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}

class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: NAD kinase-like
domain: Inorganic polyphosphate/ATP-NAD kinase PpnK
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.67  E-value=2.1  Score=31.91  Aligned_cols=34  Identities=18%  Similarity=0.294  Sum_probs=24.7

Q ss_pred             HHHhhhccEEEecCChHHHHHHHH----cCCCEEEEeC
Q 042754           80 ADHLRSASLVISHAGSGSIFETLR----HGKPLIVVVN  113 (178)
Q Consensus        80 ~~~~~~adlvIshaG~~Ti~E~l~----~g~P~iviP~  113 (178)
                      .+....+|+||+=||=||++.++.    .++|.+-|-.
T Consensus        66 ~~~~~~~Dlvi~lGGDGT~L~a~~~~~~~~~PilGin~  103 (302)
T d1u0ta_          66 QHAADGCELVLVLGGDGTFLRAAELARNASIPVLGVNL  103 (302)
T ss_dssp             ------CCCEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             ccccccccEEEEEcCChHHHHHHHHhhccCCeEEEeCC
Confidence            466788999999999999998874    3899999865

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=82.29  E-value=1.4  Score=32.67  Aligned_cols=18  Identities=28%  Similarity=0.364  Sum_probs=13.5

Q ss_pred             hHHHHhh--hccEEEecCCh
Q 042754           78 SIADHLR--SASLVISHAGS   95 (178)
Q Consensus        78 ~~~~~~~--~adlvIshaG~   95 (178)
                      .+...++  .+|+|||-|+.
T Consensus        64 ~l~~~~~~~~~d~ViHlAa~   83 (338)
T d1udca_          64 LMTEILHDHAIDTVIHFAGL   83 (338)
T ss_dssp             HHHHHHHHTTCSEEEECCSC
T ss_pred             HHHHHHhccCCCEEEECCCc
Confidence            3667777  68999997754

>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: MrsD
species: Bacillus sp. hil-y85/54728 [TaxId: 69002]

Probab=81.95  E-value=2.7  Score=28.96  Aligned_cols=55  Identities=24%  Similarity=0.190  Sum_probs=36.7

Q ss_pred             HHhhhccEE-EecCChHHHHH-------------HHHcCCCEEEEeCCCC-C-Cch-HHHHHHHHHhCCCEE
Q 042754           81 DHLRSASLV-ISHAGSGSIFE-------------TLRHGKPLIVVVNEDL-M-DNH-QSELAEELAARKHLY  135 (178)
Q Consensus        81 ~~~~~adlv-IshaG~~Ti~E-------------~l~~g~P~iviP~~~~-~-~~~-Q~~nA~~l~~~G~~~  135 (178)
                      ++-.++|++ |.-+-++|+..             +++.++|.+++|.... + ++- =.+|-+.|.+.|+-+
T Consensus        75 ~l~~~aD~~vIaPaTaNtlaKiA~GiaDnL~t~~~la~~~pvviaPaMn~~M~~np~~~~ni~~L~~~G~~v  146 (183)
T d1p3y1_          75 EIGRWADIYCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKDGHIV  146 (183)
T ss_dssp             HHHHHCSEEEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHHTCEE
T ss_pred             eccccccEEEEEecCHHHHHHHHhhhccchhhHHHhhccCceEEEEccchHHHhhhhhHHHHHHHHHCCCEE
Confidence            555778865 66677776644             4789999999996310 0 010 136888899999765

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.68  E-value=0.95  Score=32.39  Aligned_cols=78  Identities=22%  Similarity=0.275  Sum_probs=39.2

Q ss_pred             CCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccc--cCCcceEEEEeChhhHHHHhhhc
Q 042754            9 SLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLG--EDGLMAVDYFTFSSSIADHLRSA   86 (178)
Q Consensus         9 ~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~--~~~~~nv~v~~~~~~~~~~~~~a   86 (178)
                      -..+++|||+||.|.+.-   +     .+.|.+.++ +|++ ++.+.........  .+....-.+..+++...+.+..-
T Consensus         5 l~gK~~lITGas~GIG~a---i-----a~~la~~Ga-~V~~-~~r~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   74 (237)
T d1uzma1           5 FVSRSVLVTGGNRGIGLA---I-----AQRLAADGH-KVAV-THRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPV   74 (237)
T ss_dssp             CCCCEEEETTTTSHHHHH---H-----HHHHHHTTC-EEEE-EESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCCHHHHH---H-----HHHHHHCCC-EEEE-EECCcchhcCceEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            356899999999876532   2     234456776 6654 5554322211100  00000000111222333444568


Q ss_pred             cEEEecCChH
Q 042754           87 SLVISHAGSG   96 (178)
Q Consensus        87 dlvIshaG~~   96 (178)
                      |++|..+|..
T Consensus        75 DiLVnnAG~~   84 (237)
T d1uzma1          75 EVLVSNAGLS   84 (237)
T ss_dssp             SEEEEECSCC
T ss_pred             eEEEeeeccc
Confidence            9999999953

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.61  E-value=0.77  Score=31.68  Aligned_cols=14  Identities=14%  Similarity=0.033  Sum_probs=10.3

Q ss_pred             hhhccEEEecCChH
Q 042754           83 LRSASLVISHAGSG   96 (178)
Q Consensus        83 ~~~adlvIshaG~~   96 (178)
                      ...+|.||++.|..
T Consensus        60 ~~~~d~vi~~~g~~   73 (212)
T d2a35a1          60 DGSIDTAFCCLGTT   73 (212)
T ss_dssp             CSCCSEEEECCCCC
T ss_pred             ccchheeeeeeeee
Confidence            35579999988754

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=80.56  E-value=4.7  Score=25.12  Aligned_cols=87  Identities=11%  Similarity=0.064  Sum_probs=45.9

Q ss_pred             CCCCCCcEEEEEeCCccHHHHHHHhccHHHHHHHHhCCCCeEEEEEeCCCcccccccccCCcceEEEEeChhh--HHHHh
Q 042754            6 DSVSLKRIVFVTVGTTCFDALVKAVDTLEVKQELTRRGYTHLLIQMGRGTYVPTKSLGEDGLMAVDYFTFSSS--IADHL   83 (178)
Q Consensus         6 ~~~~~~~~ilVt~Gs~~~~~l~~~~~~~~~~~~l~~~~~~~vvv~~G~~~~~~~~~~~~~~~~nv~v~~~~~~--~~~~~   83 (178)
                      +..+..++|.|.+|+|    |-+++     ..+..+.++ ++++.....+. +...    ......+.+|.+.  +.++.
T Consensus         6 ~~~~~~~kigIlGgGQ----L~rMl-----a~aA~~lG~-~v~v~d~~~~~-PA~~----va~~~i~~~~~d~~~l~~~~   70 (111)
T d1kjqa2           6 ALRPAATRVMLLGSGE----LGKEV-----AIECQRLGV-EVIAVDRYADA-PAMH----VAHRSHVINMLDGDALRRVV   70 (111)
T ss_dssp             TTSTTCCEEEEESCSH----HHHHH-----HHHHHTTTC-EEEEEESSTTC-GGGG----GSSEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEEeCCH----HHHHH-----HHHHHHCCC-EEEEEcCCCCC-chhh----cCCeEEECCCCCHHHHHHHH
Confidence            3344567899999987    44444     223456787 88887765442 3221    1134455666532  33333


Q ss_pred             hh--ccEE---EecCChHHHHHHHHcCCC
Q 042754           84 RS--ASLV---ISHAGSGSIFETLRHGKP  107 (178)
Q Consensus        84 ~~--adlv---IshaG~~Ti~E~l~~g~P  107 (178)
                      ..  +|+|   +=|--..++.++-..|+|
T Consensus        71 ~~~~~DviT~E~EnI~~~~L~~le~~g~~   99 (111)
T d1kjqa2          71 ELEKPHYIVPEIEAIATDMLIQLEEEGLN   99 (111)
T ss_dssp             HHHCCSEEEECSSCSCHHHHHHHHHTTCE
T ss_pred             HhhCCceEEEEecCcCHHHHHHHHHCCCe
Confidence            32  4776   233333344444455555