Citrus Sinensis ID: 042925

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
MDHSCLSGSFAFIVLLVTSLRISCRADTTSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDKNSTGVLTSFYLASRSSHHDEIDLEFLGNNGPPYKLHTNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFPSQPMHIFASIWHAEGWASDGRKTDWHQAPFHAHYQDFHVDGCVLQDHNIRECHSPKFWWNAEKYRKLNPDQEREYRNVRKMHLVYDYCSSKSSSHYPECHK
cccccHHHHHHHHHHHHHHHHcccccccccccccEEEEEccccEEEEccccEEEEEEccccccEEEEccEEEEEEEEEEEEccccccccEEEEEEEEcccccccccEEEcccccccccEEEEEEEEcccccEEEEEEcccccccccEEEEEEEcccEEEEEEccEEEEEEEccccccccccccccEEEEEEEccccccccccccccccccEEEEEccEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHccEEEEccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccEEEEccccEEEEEEEccccccccccccEEEEEEEEEEEEcccccccEEEEEEEccccccccEEEEEEcccccccEEEEEEEEEccEccccEEEEccccHHHccEEEEEEEEccEEEEEEccEcEEEEEccHHccccccccccEEEEEEcccccccccccccccccccEEEEEEccccccEEccccccccccccccccccHHHHHccHHHHHHHHHHHHccEEEEcccccccccccHccc
mdhsclsgSFAFIVLLVTSLRIscradttsfndnyhvtwghdhALLLNQDREIQLTldqksgagfeskmrygsglfhirmkipdknstgvLTSFYLasrsshhdeidleflgnngppyklhtnlyingqggreqqillwfdptkdfhsykiLWNEHQIVffvdnvpirvyrnnirkkvsfpsqpmhIFASIWhaegwasdgrktdwhqapfhahyqdfhvdgcvlqdhnirechspkfwwnaekyrklnpdqereYRNVRKMHLVYDycsskssshypechk
MDHSCLSGSFAFIVLLVTSLRISCRADTTSFNDNYHVTWGHDHALLLNQDREIQLTLdqksgagfeSKMRYGSGLFHIRMKIPDKNSTGVLTSFYLASRSSHHDEIDLEFLGNNGPPYKLHTNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFPSQPMHIFASIWHAEGWASDGRKTDWHQAPFHAHYQDFHVDGCVLQDHNIRECHspkfwwnaekyrklnpdqereyRNVRKMHLVYDycsskssshypechk
MDHSCLSGSFAFIVLLVTSLRISCRADTTSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDKNSTGVLTSFYLASRSSHHDEIDLEFLGNNGPPYKLHTNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFPSQPMHIFASIWHAEGWASDGRKTDWHQAPFHAHYQDFHVDGCVLQDHNIRECHSPKFWWNAEKYRKLNPDQEREYRNVRKMHLVYDYCSSKSSSHYPECHK
****CLSGSFAFIVLLVTSLRISCRADTTSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDKNSTGVLTSFYLASRSSHHDEIDLEFLGNNGPPYKLHTNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFPSQPMHIFASIWHAEGWASDGRKTDWHQAPFHAHYQDFHVDGCVLQDHNIRECHSPKFWWNAEKYRKLNPD*EREYRNVRKMHLVYDYC*************
********SFAFIVLLVTSLRISCRADTTSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDKNSTGVLTSFYLASRSSHHDEIDLEFLGNNGPPYKLHTNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFPSQPMHIFASIWHAEGWASDGRKTDWHQAPFHAHYQDFHVDGCVLQDHNI*********************QEREYRNVRKMHLVYDYCSSKSSSHYPEC**
MDHSCLSGSFAFIVLLVTSLRISCRADTTSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDKNSTGVLTSFYLASRSSHHDEIDLEFLGNNGPPYKLHTNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFPSQPMHIFASIWHAEGWASDGRKTDWHQAPFHAHYQDFHVDGCVLQDHNIRECHSPKFWWNAEKYRKLNPDQEREYRNVRKMHLVYDYCS************
**HSCLSGSFAFIVLLVTSLRISCRADTTSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDKNSTGVLTSFYLASRSSHHDEIDLEFLGNNGPPYKLHTNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFPSQPMHIFASIWHAEGWASDGRKTDWHQAPFHAHYQDFHVDGCVLQDHNIREC**PKFWWNAEKYRKLNPDQEREYRNVRKMHLVYDYCSSKSSSHYP*C**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooo
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDHSCLSGSFAFIVLLVTSLRISCRADTTSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDKNSTGVLTSFYLASRSSHHDEIDLEFLGNNGPPYKLHTNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFPSQPMHIFASIWHAEGWASDGRKTDWHQAPFHAHYQDFHVDGCVLQDHNIRECHSPKFWWNAEKYRKLNPDQEREYRNVRKMHLVYDYCSSKSSSHYPECHK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query282 2.2.26 [Sep-21-2011]
Q9SV61292 Putative xyloglucan endot yes no 0.957 0.924 0.459 7e-78
Q9SV60292 Xyloglucan endotransgluco no no 0.964 0.931 0.468 6e-75
Q9LJR7290 Xyloglucan endotransgluco no no 0.957 0.931 0.454 6e-75
Q9SMP1277 Probable xyloglucan endot no no 0.851 0.866 0.474 6e-64
Q9XIW1293 Probable xyloglucan endot no no 0.978 0.941 0.432 8e-64
Q40144296 Probable xyloglucan endot N/A no 0.982 0.935 0.439 5e-63
Q41542293 Probable xyloglucan endot N/A no 0.893 0.860 0.449 1e-62
Q6YDN9295 Xyloglucan endotransgluco N/A no 0.929 0.888 0.438 6e-62
Q39857295 Probable xyloglucan endot no no 0.911 0.871 0.469 7e-62
P93349295 Probable xyloglucan endot N/A no 0.982 0.938 0.432 7e-62
>sp|Q9SV61|XTH1_ARATH Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=3 SV=2 Back     alignment and function desciption
 Score =  290 bits (742), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 130/283 (45%), Positives = 188/283 (66%), Gaps = 13/283 (4%)

Query: 10  FAFIVLLVTSLRISCRA--------DTTSFNDNYHVTWGHDHALLLNQDREIQLTLDQKS 61
           F F+ +L   +R+  RA            F+DNY VTWG ++ L LNQ +E+QL+LD  S
Sbjct: 7   FGFVSVLYLIIRVDARAYEVNGIDQSKVGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSS 66

Query: 62  GAGFESKMRYGSGLFHIRMKIPDKNSTGVLTSFYLASRSSHHDEIDLEFLGNNGPPYKLH 121
           G+GFESK  Y SG F IR+K+P K+++GV+T+FYL S+ + HDE+D EFLGN      + 
Sbjct: 67  GSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKGNTHDEVDFEFLGNKEGKLAVQ 126

Query: 122 TNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFP 181
           TN++ NG+G REQ++ LWFDP+KDFH+Y ILWN +QIV +VDN+P+RV++N   + +++P
Sbjct: 127 TNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYP 186

Query: 182 SQPMHIFASIWHAEGWASDGRKT--DWHQAPFHAHYQDFHVDGCVLQDHNIRECHSPKFW 239
           S+PM +  S+W+ E WA+DG K+  +W  APF A++Q F+  GC   +     C S  +W
Sbjct: 187 SKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGC-FTNAEKNACGSSAYW 245

Query: 240 WNAEKYRKLNPDQEREYRNVRKMHLVYDYCSSKSSSHYP--EC 280
           WN   Y KL+  +++ Y NVR+ ++ YDYCS K   H P  EC
Sbjct: 246 WNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSDKVRFHVPPSEC 288
May catalyze xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|Q9SV60|XTH2_ARATH Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LJR7|XTH3_ARATH Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1 Back     alignment and function description
>sp|Q9SMP1|XTH11_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=2 Back     alignment and function description
>sp|Q9XIW1|XTH5_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1 Back     alignment and function description
>sp|Q40144|XTH1_SOLLC Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1 Back     alignment and function description
>sp|Q41542|XTH_WHEAT Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q6YDN9|XTH_BRAOB Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1 Back     alignment and function description
>sp|Q39857|XTH_SOYBN Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|P93349|XTH_TOBAC Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
356566333289 PREDICTED: xyloglucan endotransglucosyla 0.964 0.941 0.517 2e-82
356524479286 PREDICTED: xyloglucan endotransglucosyla 0.914 0.902 0.530 1e-81
255560117285 Xyloglucan endotransglucosylase/hydrolas 0.968 0.957 0.522 4e-81
147814856 1159 hypothetical protein VITISV_032683 [Viti 0.872 0.212 0.547 1e-80
359480415280 PREDICTED: putative xyloglucan endotrans 0.872 0.878 0.547 4e-80
297790590296 predicted protein [Arabidopsis lyrata su 0.957 0.912 0.468 2e-77
224065383272 predicted protein [Populus trichocarpa] 0.893 0.926 0.523 1e-76
442556965293 xyloglucan endotransglucosylase [Gossypi 0.953 0.918 0.482 3e-76
22328589292 xyloglucan:xyloglucosyl transferase [Ara 0.957 0.924 0.459 4e-76
5123949295 endoxyloglucan transferase-like protein 0.957 0.915 0.459 5e-76
>gi|356566333|ref|XP_003551387.1| PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 2-like [Glycine max] Back     alignment and taxonomy information
 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 145/280 (51%), Positives = 193/280 (68%), Gaps = 8/280 (2%)

Query: 9   SFAFIVLLVTSLRISC--RADTTSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFE 66
           +F F++LL  +L I+    A   SF  NY + WG  H   L   RE+QL++D+ SGAGF 
Sbjct: 9   NFCFVLLLFVALGIAYAREAFEVSFQQNYKIAWGKHHIFFLQHGREVQLSIDKTSGAGFR 68

Query: 67  SKMRYGSGLFHIRMKIPDKNSTGVLTSFYLASRS-----SHHDEIDLEFLGNNGPPYKLH 121
           SK+ Y SG F +R+KIP+K+  GV+T+FYL S +     + HDEID EFLGNNG P+ L 
Sbjct: 69  SKLEYASGFFQMRIKIPNKDCRGVVTAFYLTSTAYKHLGAKHDEIDFEFLGNNGQPHTLQ 128

Query: 122 TNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFP 181
           TN++ N +GGREQ+  LWFDPT  FH+Y +LWN+HQIVF+VD +PIRV++N     VSFP
Sbjct: 129 TNVFTNDEGGREQRHSLWFDPTIIFHTYGVLWNQHQIVFYVDEIPIRVFKNYSNVGVSFP 188

Query: 182 SQPMHIFASIWHAEGWASDGRKTDWHQAPFHAHYQDFHVDGCVLQDHNIRECHSPKFWWN 241
           SQ MH+ ASIW+ E WAS+G++ DW QAPF A +Q F++ GC  Q++N   C+SP  WWN
Sbjct: 189 SQQMHVTASIWNGEPWASNGKRIDWKQAPFTAQFQGFNIHGCQTQNYNKHACYSPYLWWN 248

Query: 242 AEKYRKLNPDQEREYRNVRKMHLVYDYCSSKSSSHYPECH 281
            +K+ KLN  Q+R Y +VRK HL+YDYCS +   H  EC 
Sbjct: 249 DKKHWKLNSQQQRAYEDVRKKHLLYDYCSDRGELH-KECQ 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356524479|ref|XP_003530856.1| PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 2-like [Glycine max] Back     alignment and taxonomy information
>gi|255560117|ref|XP_002521076.1| Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis] gi|223539645|gb|EEF41227.1| Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147814856|emb|CAN63612.1| hypothetical protein VITISV_032683 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359480415|ref|XP_003632454.1| PREDICTED: putative xyloglucan endotransglucosylase/hydrolase protein 1-like [Vitis vinifera] gi|296086841|emb|CBI33008.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297790590|ref|XP_002863180.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297309014|gb|EFH39439.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224065383|ref|XP_002301792.1| predicted protein [Populus trichocarpa] gi|222843518|gb|EEE81065.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|442556965|gb|AGC54941.1| xyloglucan endotransglucosylase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|22328589|ref|NP_193044.2| xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] gi|334302868|sp|Q9SV61.2|XTH1_ARATH RecName: Full=Putative xyloglucan endotransglucosylase/hydrolase protein 1; Short=At-XTH1; Short=XTH-1; Flags: Precursor gi|332657828|gb|AEE83228.1| xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|5123949|emb|CAB45507.1| endoxyloglucan transferase-like protein [Arabidopsis thaliana] gi|7268010|emb|CAB78350.1| endoxyloglucan transferase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
TAIR|locus:2123281292 XTH1 "xyloglucan endotransgluc 0.957 0.924 0.462 1.2e-72
TAIR|locus:2086959290 XTH3 "xyloglucan endotransgluc 0.886 0.862 0.486 3.2e-72
TAIR|locus:2123201292 XTH2 "xyloglucan endotransgluc 0.960 0.928 0.469 2.9e-71
TAIR|locus:2159118293 XTH5 "xyloglucan endotransgluc 0.957 0.921 0.440 1.1e-62
TAIR|locus:2114545277 XTH11 "xyloglucan endotransglu 0.893 0.909 0.457 3.8e-62
TAIR|locus:2169990292 XTH6 "xyloglucan endotransgluc 0.939 0.907 0.418 5e-60
TAIR|locus:2137609293 XTH7 "xyloglucan endotransgluc 0.879 0.846 0.445 6.4e-60
TAIR|locus:2065821296 XTH4 "xyloglucan endotransgluc 0.921 0.878 0.429 9.3e-59
TAIR|locus:2823919305 XTH8 "xyloglucan endotransgluc 0.957 0.885 0.432 1.2e-58
TAIR|locus:2095168291 XTH16 "xyloglucan endotransglu 0.943 0.914 0.421 4.2e-56
TAIR|locus:2123281 XTH1 "xyloglucan endotransglucosylase/hydrolase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
 Identities = 131/283 (46%), Positives = 189/283 (66%)

Query:    10 FAFIVLLVTSLRISCRA------DTTS--FNDNYHVTWGHDHALLLNQDREIQLTLDQKS 61
             F F+ +L   +R+  RA      D +   F+DNY VTWG ++ L LNQ +E+QL+LD  S
Sbjct:     7 FGFVSVLYLIIRVDARAYEVNGIDQSKVGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSS 66

Query:    62 GAGFESKMRYGSGLFHIRMKIPDKNSTGVLTSFYLASRSSHHDEIDLEFLGNNGPPYKLH 121
             G+GFESK  Y SG F IR+K+P K+++GV+T+FYL S+ + HDE+D EFLGN      + 
Sbjct:    67 GSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKGNTHDEVDFEFLGNKEGKLAVQ 126

Query:   122 TNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFP 181
             TN++ NG+G REQ++ LWFDP+KDFH+Y ILWN +QIV +VDN+P+RV++N   + +++P
Sbjct:   127 TNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYP 186

Query:   182 SQPMHIFASIWHAEGWASDGRKT--DWHQAPFHAHYQDFHVDGCVLQDHNIRECHSPKFW 239
             S+PM +  S+W+ E WA+DG K+  +W  APF A++Q F+  GC         C S  +W
Sbjct:   187 SKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCFTNAEK-NACGSSAYW 245

Query:   240 WNAEKYRKLNPDQEREYRNVRKMHLVYDYCSSKSSSHYP--EC 280
             WN   Y KL+  +++ Y NVR+ ++ YDYCS K   H P  EC
Sbjct:   246 WNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSDKVRFHVPPSEC 288
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006073 "cellular glucan metabolic process" evidence=IEA
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
TAIR|locus:2086959 XTH3 "xyloglucan endotransglucosylase/hydrolase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2123201 XTH2 "xyloglucan endotransglucosylase/hydrolase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159118 XTH5 "xyloglucan endotransglucosylase/hydrolase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2114545 XTH11 "xyloglucan endotransglucosylase/hydrolase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169990 XTH6 "xyloglucan endotransglucosylase/hydrolase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137609 XTH7 "xyloglucan endotransglucosylase/hydrolase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065821 XTH4 "xyloglucan endotransglucosylase/hydrolase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2823919 XTH8 "xyloglucan endotransglucosylase/hydrolase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095168 XTH16 "xyloglucan endotransglucosylase/hydrolase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SV61XTH1_ARATH2, ., 4, ., 1, ., 2, 0, 70.45930.95740.9246yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.207LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00011620001
SubName- Full=Chromosome undetermined scaffold_323, whole genome shotgun sequence; (259 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 1e-123
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 2e-77
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 2e-65
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 4e-28
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 3e-24
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 2e-19
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 2e-12
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 1e-07
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 6e-07
cd08024330 cd08024, GH16_CCF, Coelomic cytolytic factor, memb 0.002
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
 Score =  351 bits (902), Expect = e-123
 Identities = 133/263 (50%), Positives = 176/263 (66%), Gaps = 8/263 (3%)

Query: 26  ADTTSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDK 85
           A   SF++N+ VTWG DH  + N    +QLTLDQ SG+GF+SK +Y  G F +R+K+P  
Sbjct: 1   AVAASFDENFFVTWGPDHIRVSNDGTSVQLTLDQSSGSGFKSKNKYLFGFFSMRIKLPPG 60

Query: 86  NSTGVLTSFYLASR-SSHHDEIDLEFLGN-NGPPYKLHTNLYINGQGGREQQILLWFDPT 143
           +S G +T+FYL+S+   +HDEID EFLGN  G PY L TN++ NG GGREQ+I LWFDPT
Sbjct: 61  DSAGTVTAFYLSSQGPDNHDEIDFEFLGNVTGQPYTLQTNVFANGVGGREQRIYLWFDPT 120

Query: 144 KDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFPS-QPMHIFASIWHAEGWASDG- 201
            DFH+Y ILWN HQIVF+VD+VPIRV++NN    V +PS QPM ++ASIW    WA+ G 
Sbjct: 121 ADFHTYSILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDGSDWATQGG 180

Query: 202 -RKTDWHQAPFHAHYQDFHVDGCVLQDH-NIRECHSPKFWWNAEKYRKLNPDQEREYRNV 259
             K DW  APF A Y+DF +DGCV+    +   C   + WWN   Y++L+ +Q+R    V
Sbjct: 181 RVKIDWSYAPFVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSANQQRAMEWV 240

Query: 260 RKMHLVYDYCSSKSSSHY--PEC 280
           R+ ++VYDYC  +       PEC
Sbjct: 241 RRNYMVYDYCDDRKRYPVPPPEC 263

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. Length = 263
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information
>gnl|CDD|185694 cd08024, GH16_CCF, Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 282
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 100.0
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 100.0
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 100.0
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 100.0
cd08023235 GH16_laminarinase_like Laminarinase, member of the 100.0
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 100.0
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 99.97
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 99.96
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 99.96
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.94
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 99.94
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 99.93
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.74
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 99.58
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 99.34
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 95.82
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 93.88
smart00560133 LamGL LamG-like jellyroll fold domain. 91.84
smart00210184 TSPN Thrombospondin N-terminal -like domains. Hepa 91.66
cd00152201 PTX Pentraxins are plasma proteins characterized b 87.67
smart00159206 PTX Pentraxin / C-reactive protein / pentaxin fami 87.59
cd00110151 LamG Laminin G domain; Laminin G-like domains are 82.93
PF06439185 DUF1080: Domain of Unknown Function (DUF1080); Int 82.31
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.3e-80  Score=569.59  Aligned_cols=273  Identities=40%  Similarity=0.832  Sum_probs=245.4

Q ss_pred             HHHHHHHHHHhhh-ccccCCCCccCCceeeecCCCeEEeCCCceEEEEEeCCCcceEEEceeeeccEEEEEEEeeCCCCC
Q 042925           10 FAFIVLLVTSLRI-SCRADTTSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDKNST   88 (282)
Q Consensus        10 ~~~~~~~~~~~~~-~~~~~~~~f~~~~~~~w~~~~v~~~~~G~~l~L~l~~~sga~i~S~~~f~YG~~eariKl~~g~s~   88 (282)
                      .+|++.+++++++ .-.....+|.++|.+.|+.+|+.+..+|+.|+|+||+.+|++|+||+.|+||+||+|||+|+|+++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~w~~~~~~~~~~g~~l~L~ld~~sgs~~~Sk~~f~yGr~E~riKLp~G~sa   84 (291)
T PLN03161          5 KTLLVALFAALAAFDRSFVEADFSKSMYFTWGADHSSMLGNGDNLQLVLDQSSGSGIKSKRAFLFGSIEMLIKLVPGNSA   84 (291)
T ss_pred             HHHHHHHHHHHHhcCCCcccccccccceeeEcCCcEEEeCCCCEEEEEEeCCccCcEEecceEEEEEEEEEEEeCCCCCC
Confidence            4555555554443 211235789999999999999999888889999999999999999999999999999999998889


Q ss_pred             ceEeeEEEecCCCCCCceEEEEcCC-CCCCceEEeeEEecCcCCeeeEEEccCCCCCCcEEEEEEEccCeEEEEEcCeEE
Q 042925           89 GVLTSFYLASRSSHHDEIDLEFLGN-NGPPYKLHTNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPI  167 (282)
Q Consensus        89 G~v~Af~l~s~~~~~~EIDiE~lGn-~g~p~~~qtn~~~~g~g~~e~~~~l~fdps~dfHtY~i~Wtp~~I~fyVDG~~v  167 (282)
                      |+||||||++.++.+|||||||||+ +|+|+++|+|+|.+|.+++++++.++|||+++||+|+|+|+|++|+|||||++|
T Consensus        85 G~v~AFwl~s~~~~~dEIDiEfLG~~~g~~~~vqtN~y~~g~g~re~~~~l~fDpt~dFHtYsI~Wtp~~I~wyVDG~~i  164 (291)
T PLN03161         85 GTVTAYYLSSTGSRHDEIDFEFLGNVSGQPYTIHTNIYTQGNGSREQQFRPWFDPTADFHNYTIHWNPSEVVWYVDGTPI  164 (291)
T ss_pred             CeEEEEEecCCCCCCCeEEEEecCCCCCCceEEEeceEeCCcCCcceeccccCCCccCcEEEEEEEchhhEEEEECCEEE
Confidence            9999999998767799999999999 889999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCCcCCCC-CceEEEEEeecCCCCCCCCC--CCCCCCCCeEEEEcEEEEeeeecCCC-CCccccC--CCcccc
Q 042925          168 RVYRNNIRKKVSFPS-QPMHIFASIWHAEGWASDGR--KTDWHQAPFHAHYQDFHVDGCVLQDH-NIRECHS--PKFWWN  241 (282)
Q Consensus       168 r~~~~~~~~g~~~P~-~Pm~l~lnlW~gg~Wat~gg--~~d~~~~Pf~a~~~~~~v~~c~~~~~-~~~~c~~--~~~~~~  241 (282)
                      |++++.+..|.+||+ +||+|++|||+|++|||+||  +|||+++||+|.|++|++++|.+++. ....|.+  ...||+
T Consensus       165 Rt~~~~~~~g~~yP~~~pM~i~~siW~g~~wAt~gG~~kidw~~aPf~a~~~~f~~~~C~~~~~~~~~~c~~~~~~~~~~  244 (291)
T PLN03161        165 RVFRNYENEGIAYPNKQGMRVYSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARACKWNGPVSIKQCADPTPSNWWT  244 (291)
T ss_pred             EEEEcccccCCcCCCccceEEEEeeecCCCcccCCCceeccCCcCCeeEEeeeEEEEeeccCCCCCccccCCCCcccccc
Confidence            999987777889998 89999999999999999985  69999999999999999999987643 3357975  467999


Q ss_pred             cccccCCCHHHHHHHHHhhccCeEEeccCCCC--CC-CCCCCCC
Q 042925          242 AEKYRKLNPDQEREYRNVRKMHLVYDYCSSKS--SS-HYPECHK  282 (282)
Q Consensus       242 ~~~~~~l~~~~~~~~~~v~~~~m~YdYC~d~~--~~-~p~EC~~  282 (282)
                      ++.|+.|+++|+++|+|||+||||||||+|++  |+ +||||.+
T Consensus       245 ~~~~~~l~~~~~~~~~~v~~~~m~Y~YC~D~~R~~~~~p~EC~~  288 (291)
T PLN03161        245 SPSYSQLTNAQLTQMKKVRDNFMIYDYCKDTKRFNGVMPPECFK  288 (291)
T ss_pred             CccccCCCHHHHHHHHHHHhCcEEEeccCCCCcCCCCcCcccCC
Confidence            99999999999999999999999999999998  88 6999975

>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>smart00560 LamGL LamG-like jellyroll fold domain Back     alignment and domain information
>smart00210 TSPN Thrombospondin N-terminal -like domains Back     alignment and domain information
>cd00152 PTX Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity Back     alignment and domain information
>smart00159 PTX Pentraxin / C-reactive protein / pentaxin family Back     alignment and domain information
>cd00110 LamG Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans Back     alignment and domain information
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 2e-63
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 4e-45
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 4e-45
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 2e-44
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 3e-44
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 2e-17
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 2e-17
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 9e-17
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 1e-16
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 1e-16
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 2e-16
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 1e-14
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 2e-14
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 5e-13
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 9e-13
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 1e-12
1ajo_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 7e-06
1ajo_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 1e-04
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure 
Iteration: 1

 Score =  238 bits (608), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 120/260 (46%), Positives = 166/260 (63%), Gaps = 6/260 (2%)
Query: 29  TSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDKNST 88
            +F  NY  TW  DH    N   EIQL LD+ +G GF+SK  Y  G F ++MK+   +S 
Sbjct: 15  VAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSA 74
Query: 89  GVLTSFYLASRSSHHDEIDLEFLGN-NGPPYKLHTNLYINGQGGREQQILLWFDPTKDFH 147
           G +T+FYL+S++S HDEID EFLGN  G PY L TN++  G+G REQ+I LWFDPTK+FH
Sbjct: 75  GTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFH 134
Query: 148 SYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFP-SQPMHIFASIWHAEGWASDG--RKT 204
            Y +LWN + IVF VD+VPIRV++N     V FP +QPM I++S+W+A+ WA+ G   KT
Sbjct: 135 YYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKT 194
Query: 205 DWHQAPFHAHYQDFHVDGCVLQDHNIRECHSPKFWWNAEKYRKLNPDQEREYRNVRKMHL 264
           DW +APF A Y+ FH+DGC               WW+ ++++ L+  Q R    VR+ + 
Sbjct: 195 DWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYT 254
Query: 265 VYDYCSSKS--SSHYPECHK 282
           +Y+YC+ +S   S  PEC +
Sbjct: 255 IYNYCTDRSRYPSMPPECKR 274
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1AJO|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-127 Length = 214 Back     alignment and structure
>pdb|1AJO|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-127 Length = 214 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 3e-82
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 2e-72
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 2e-59
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 3e-59
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 3e-57
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 6e-57
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 2e-51
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 2e-50
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 9e-39
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 1e-22
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 5e-12
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 3e-09
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 5e-08
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 3e-07
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 3e-07
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 6e-07
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 6e-07
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 7e-07
3rq0_A269 Glycosyl hydrolases family protein 16; structural 1e-06
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 8e-06
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 1e-05
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 8e-05
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 9e-05
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 1e-04
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
 Score =  247 bits (633), Expect = 3e-82
 Identities = 120/257 (46%), Positives = 165/257 (64%), Gaps = 6/257 (2%)

Query: 30  SFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDKNSTG 89
           +F  NY  TW  DH    N   EIQL LD+ +G GF+SK  Y  G F ++MK+   +S G
Sbjct: 16  AFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAG 75

Query: 90  VLTSFYLASRSSHHDEIDLEFLGNN-GPPYKLHTNLYINGQGGREQQILLWFDPTKDFHS 148
            +T+FYL+S++S HDEID EFLGN  G PY L TN++  G+G REQ+I LWFDPTK+FH 
Sbjct: 76  TVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHY 135

Query: 149 YKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFP-SQPMHIFASIWHAEGWASDG--RKTD 205
           Y +LWN + IVF VD+VPIRV++N     V FP +QPM I++S+W+A+ WA+ G   KTD
Sbjct: 136 YSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTD 195

Query: 206 WHQAPFHAHYQDFHVDGCVLQDHNIRECHSPKFWWNAEKYRKLNPDQEREYRNVRKMHLV 265
           W +APF A Y+ FH+DGC               WW+ ++++ L+  Q R    VR+ + +
Sbjct: 196 WSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTI 255

Query: 266 YDYCSSKS--SSHYPEC 280
           Y+YC+ +S   S  PEC
Sbjct: 256 YNYCTDRSRYPSMPPEC 272
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Length = 266 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Length = 269 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Length = 288 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Length = 280 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Length = 363 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Length = 324 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 100.0
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 100.0
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 100.0
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 100.0
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 100.0
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 100.0
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 100.0
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 100.0
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 100.0
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 100.0
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 100.0
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 100.0
3rq0_A269 Glycosyl hydrolases family protein 16; structural 100.0
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 100.0
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 100.0
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 100.0
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 99.97
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 99.97
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 99.97
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 99.97
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 99.97
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.93
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.91
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.87
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.79
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 97.29
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 95.07
2v73_A191 CBM40, putative EXO-alpha-sialidase; carbohydrate- 87.57
3pvn_A206 C-reactive protein; pentraxin family, immune syste 85.55
3u1x_A236 Putative glycosyl hydrolase; glycosyl hydrolysis, 83.49
3kqr_A204 Serum amyloid P-component; glycoprotein, disulfide 82.67
4dqa_A355 Uncharacterized protein; two domains structure, DU 80.94
3hbk_A245 Putative glycosyl hydrolase; YP_001302580.1, WAS d 80.49
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
Probab=100.00  E-value=1.7e-74  Score=530.58  Aligned_cols=254  Identities=48%  Similarity=0.933  Sum_probs=236.4

Q ss_pred             CCCCccCCceeeecCCCeEEeCCCceEEEEEeCCCcceEEEceeeeccEEEEEEEeeCCCCCceEeeEEEecCCCCCCce
Q 042925           27 DTTSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDKNSTGVLTSFYLASRSSHHDEI  106 (282)
Q Consensus        27 ~~~~f~~~~~~~w~~~~v~~~~~G~~l~L~l~~~sga~i~S~~~f~YG~~eariKl~~g~s~G~v~Af~l~s~~~~~~EI  106 (282)
                      .+.+|.++|+++|+++||++.++|+.|+|+|++.+||+|.|+++|+||+||||||+|+|+++|+||||||++.+|.++||
T Consensus        13 ~~~~f~~~~~~~w~~~nv~~~~~G~~l~L~l~~~tsa~i~Sk~~f~YGr~Ear~Klp~g~s~G~wpAfwll~~~p~~gEI   92 (278)
T 1umz_A           13 VDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDEI   92 (278)
T ss_dssp             CCCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCEE
T ss_pred             cCCcccCCceeeECCCCEEEeCCCCEEEEEECCCccCEEEECcEEECEEEEEEEEeCCCCCCceEEEEEEecCCCCCCeE
Confidence            46899999999999999999888888999999999999999999999999999999998778999999999988889999


Q ss_pred             EEEEcCC-CCCCceEEeeEEecCcCCeeeEEEccCCCCCCcEEEEEEEccCeEEEEEcCeEEEEEEecCCCCcCCC-CCc
Q 042925          107 DLEFLGN-NGPPYKLHTNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFP-SQP  184 (282)
Q Consensus       107 DiE~lGn-~g~p~~~qtn~~~~g~g~~e~~~~l~fdps~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P-~~P  184 (282)
                      |||++|+ +|+|+++|+|+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||+++|++++.+..+.+|| .+|
T Consensus        93 DmE~lG~~~g~~~tvhtn~~~~g~~~~~~~~~l~~d~~~dFHtY~i~Wtp~~I~fyVDG~~v~t~~~~~~~g~~~Pf~~P  172 (278)
T 1umz_A           93 DFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQP  172 (278)
T ss_dssp             EEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSSC
T ss_pred             EEEEeCCCCCCceEEEEEEecCCCCCCcceEecCCCCccCcEEEEEEEecCeEEEEECCeEEEEEecCcCcCccCcCCCc
Confidence            9999999 88899999999999998999999999999999999999999999999999999999988766677899 599


Q ss_pred             eEEEEEeecCCCCCCCCC--CCCCCCCCeEEEEcEEEEeeeecCCCCCccccC-CCcccccccccCCCHHHHHHHHHhhc
Q 042925          185 MHIFASIWHAEGWASDGR--KTDWHQAPFHAHYQDFHVDGCVLQDHNIRECHS-PKFWWNAEKYRKLNPDQEREYRNVRK  261 (282)
Q Consensus       185 m~l~lnlW~gg~Wat~gg--~~d~~~~Pf~a~~~~~~v~~c~~~~~~~~~c~~-~~~~~~~~~~~~l~~~~~~~~~~v~~  261 (282)
                      |+|+||||+||+|+++||  ++||+++||++.|+.+++.+|..+ .....|.+ ...||+++.+++|++.|+++|+|||+
T Consensus       173 ~~lilnlw~GG~Wa~~gG~~~~d~~~~p~v~~vr~~~~~~c~~~-~~~~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  251 (278)
T 1umz_A          173 MKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEAS-VEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQ  251 (278)
T ss_dssp             BEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECC-SSSCCCTTTTCSGGGSGGGSSCCHHHHHHHHHHHH
T ss_pred             eEEEEEEEECCcccCCCCccccCCCCCCEEEEEEEEEEecccCC-CCCCccCCCcccccccCccccCCHHHHHHHHHHHH
Confidence            999999999999998875  699999999999999999999875 23346975 36799999999999999999999999


Q ss_pred             cCeEEeccCCCC--CCCCCCCC
Q 042925          262 MHLVYDYCSSKS--SSHYPECH  281 (282)
Q Consensus       262 ~~m~YdYC~d~~--~~~p~EC~  281 (282)
                      ||||||||+|++  |++||||.
T Consensus       252 ~~~~y~yc~d~~r~~~~~~ec~  273 (278)
T 1umz_A          252 KYTIYNYCTDRSRYPSMPPECK  273 (278)
T ss_dssp             HTEEEEGGGCTTTCSSCCTHHH
T ss_pred             CCeEEecCCCCCcCCCCCcccC
Confidence            999999999999  88899995
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens} Back     alignment and structure
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Back     alignment and structure
>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis} Back     alignment and structure
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* Back     alignment and structure
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Back     alignment and structure
>3hbk_A Putative glycosyl hydrolase; YP_001302580.1, WAS domain of U function (DUF1080), structural genomics; HET: MSE; 2.36A {Parabacteroides distasonis atcc 8503} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 282
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 8e-79
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 3e-39
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 4e-19
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 5e-18
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 7e-11
d1upsa1266 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing 9e-05
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  237 bits (606), Expect = 8e-79
 Identities = 117/258 (45%), Positives = 162/258 (62%), Gaps = 6/258 (2%)

Query: 29  TSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDKNST 88
            +F  NY  TW  DH    N   EIQL LD+ +G GF+SK  Y  G F ++MK+   +S 
Sbjct: 4   VAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSA 63

Query: 89  GVLTSFYLASRSSHHDEIDLEFLG-NNGPPYKLHTNLYINGQGGREQQILLWFDPTKDFH 147
           G +T+FYL+S++S HDEID EFLG   G PY L TN++  G+G REQ+I LWFDPTK+FH
Sbjct: 64  GTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFH 123

Query: 148 SYKILWNEHQIVFFVDNVPIRVYRNNIRKKV-SFPSQPMHIFASIWHAEGWASDG--RKT 204
            Y +LWN + IVF VD+VPIRV++N     V    +QPM I++S+W+A+ WA+ G   KT
Sbjct: 124 YYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKT 183

Query: 205 DWHQAPFHAHYQDFHVDGCVLQDHNIRECHSPKFWWNAEKYRKLNPDQEREYRNVRKMHL 264
           DW +APF A Y+ FH+DGC               WW+ ++++ L+  Q R    VR+ + 
Sbjct: 184 DWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYT 243

Query: 265 VYDYCSSKS--SSHYPEC 280
           +Y+YC+ +S   S  PEC
Sbjct: 244 IYNYCTDRSRYPSMPPEC 261
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Length = 266 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 100.0
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 99.96
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.95
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.95
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.94
d1b09a_206 C-reactive protein (CRP) {Human (Homo sapiens) [Ta 94.5
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 93.99
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 93.58
d2erfa1206 Thrombospondin 1 N-terminal domain {Human (Homo sa 93.37
d1a8da1247 Tetanus neurotoxin {Clostridium tetani [TaxId: 151 91.9
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 91.36
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 91.19
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 90.88
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 90.22
d1w0pa2197 Vibrio cholerae sialidase, N-terminal and insertio 86.85
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 85.5
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=8.1e-77  Score=541.22  Aligned_cols=254  Identities=48%  Similarity=0.933  Sum_probs=238.4

Q ss_pred             CCCccCCceeeecCCCeEEeCCCceEEEEEeCCCcceEEEceeeeccEEEEEEEeeCCCCCceEeeEEEecCCCCCCceE
Q 042925           28 TTSFNDNYHVTWGHDHALLLNQDREIQLTLDQKSGAGFESKMRYGSGLFHIRMKIPDKNSTGVLTSFYLASRSSHHDEID  107 (282)
Q Consensus        28 ~~~f~~~~~~~w~~~~v~~~~~G~~l~L~l~~~sga~i~S~~~f~YG~~eariKl~~g~s~G~v~Af~l~s~~~~~~EID  107 (282)
                      ..+|+++|.++|+++||++.++|..|+|+|++.+||+|+||++|+||+||||||+|+|+++|++++||++++++.++|||
T Consensus         3 ~~~f~~~~~~~w~~~~v~~~~~g~~l~l~ld~~sga~i~Sk~~f~YG~~EariKlp~G~g~g~~~~f~~~s~~~~~dEID   82 (267)
T d1umza_           3 DVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDEID   82 (267)
T ss_dssp             CCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCEEE
T ss_pred             cccCCCCceecCCCCCEEEeCCCeEEEEEECCcccCceEecceEEeeEEEEEEEcCCCCccEEEEEeeecCCCCCCCeEE
Confidence            47899999999999999999999999999999999999999999999999999999998889999999998888899999


Q ss_pred             EEEcCC-CCCCceEEeeEEecCcCCeeeEEEccCCCCCCcEEEEEEEccCeEEEEEcCeEEEEEEecCCCCcCCCC-Cce
Q 042925          108 LEFLGN-NGPPYKLHTNLYINGQGGREQQILLWFDPTKDFHSYKILWNEHQIVFFVDNVPIRVYRNNIRKKVSFPS-QPM  185 (282)
Q Consensus       108 iE~lGn-~g~p~~~qtn~~~~g~g~~e~~~~l~fdps~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P~-~Pm  185 (282)
                      ||++|+ .++++++|+|+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||++||++++.+..+.++|. +||
T Consensus        83 iE~lG~~~~~~~~v~tn~~~~g~g~~~~~~~~~~d~s~dFHtY~i~Wtp~~I~fyVDG~~vr~~~n~~~~g~~~p~~~pm  162 (267)
T d1umza_          83 FEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPM  162 (267)
T ss_dssp             EEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSSCB
T ss_pred             EEEecccCCcccEEEeeEeCCCCCCcceeEecCCCCccCcEEEEEEECcceEEEEECCEEEEEEeccccCCCCCCcceEE
Confidence            999999 889999999999999999999999999999999999999999999999999999999998888888886 999


Q ss_pred             EEEEEeecCCCCCCCC--CCCCCCCCCeEEEEcEEEEeeeecCCCCCcccc-CCCcccccccccCCCHHHHHHHHHhhcc
Q 042925          186 HIFASIWHAEGWASDG--RKTDWHQAPFHAHYQDFHVDGCVLQDHNIRECH-SPKFWWNAEKYRKLNPDQEREYRNVRKM  262 (282)
Q Consensus       186 ~l~lnlW~gg~Wat~g--g~~d~~~~Pf~a~~~~~~v~~c~~~~~~~~~c~-~~~~~~~~~~~~~l~~~~~~~~~~v~~~  262 (282)
                      +|++|||+||+|||+|  +++||+++||+|.|++|+|++|.+.+. ...|. .+..||++..++.|+.+|+++|+|||+|
T Consensus       163 ~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~c~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  241 (267)
T d1umza_         163 KIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVE-AKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQK  241 (267)
T ss_dssp             EEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSS-SCCCTTTTCSGGGSGGGSSCCHHHHHHHHHHHHH
T ss_pred             EEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEecccCCC-CcccCCCCCccccccccccCCHHHHHHHHHHHHC
Confidence            9999999999999987  899999999999999999999988643 33344 5678999999999999999999999999


Q ss_pred             CeEEeccCCCC--CCCCCCCCC
Q 042925          263 HLVYDYCSSKS--SSHYPECHK  282 (282)
Q Consensus       263 ~m~YdYC~d~~--~~~p~EC~~  282 (282)
                      |||||||+|++  |.+||||.+
T Consensus       242 ~~~y~yC~d~~r~~~~p~EC~~  263 (267)
T d1umza_         242 YTIYNYCTDRSRYPSMPPECKR  263 (267)
T ss_dssp             TEEEEGGGCTTTCSSCCTHHHH
T ss_pred             CcEEccCCCCCcCCCCCcccCC
Confidence            99999999999  888999963
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure