Citrus Sinensis ID: 042934

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
TLKKENPSITILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWTAPNTSTDLFNIGLLFDEWRIAATKLEAKNSSRQQSQLILTARFHYSPPANSYLLNSRQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPADKLVMCLPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNSTYEVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHNW
cccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEcccccccHHHHcHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHcccccccEEEccccccccEEcccccccccccccccccccccccccHHHHHHHHHHcccccEEEEcccEEEEEEEEccEEEEEccHHHHHHHHHHHHHccccEEEEEEEccccccc
ccHHcccccEEEEEEcccccccccccHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccHHcccccHHHHHHHHcHHHEHEEccccccccccccccccccccccccccccHHHHHHHHHHccccHHEEEEEccccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHccccccEEEEcccccEEEEEEccEEEEcccHHHHHHHHHHHHHHcccEEEEEcHHHccccc
tlkkenpsITILLSIGQGMDTNYSIYSSMvsnsshrksfidCSIRIARLYGfqgldfawtapntstdlfniglLFDEWRIAATKLEAKNSSRQQSQLILTARfhysppansyllnsRQRNLNWVHAVTasyyepvstnftappaalygsssggfarSTDQVLKAWIErglpadklvmclpfYGYAWrlvkpedngigaaaagpalhdsglVTYKEINNHiktygpdvQVMYNSTYEVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHNW
tlkkenpsiTILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWTAPNTSTDLFNIGLLFDEWRIAATKLeaknssrqQSQLILTARFHYSPPANSYLLNSRQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPADKLVMCLPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNSTYEVNYCSIEKIWFGFDDVEAVRMKVAYakekklrgyfvwRVDYDDHNW
TLKKENPSITILLSIGQGMDTnysiyssmvsnssHRKSFIDCSIRIARLYGFQGLDFAWTAPNTSTDLFNIGLLFDEWRIAATKLEAKNSSRQQSQLILTARFHYSPPANSYLLNSRQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPADKLVMCLPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNSTYEVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHNW
********ITILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWTAPNTSTDLFNIGLLFDEWRIAATKL**********QLILTARFHYSPPANSYLLNSRQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPADKLVMCLPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNSTYEVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYD****
TLKKENPSITILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWTAPNTSTDLFNIGLLFDEWRIAATKLEAK**SRQQSQLILTARFHYSPPANSYLLNSRQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPADKLVMCLPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNSTYEVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHNW
TLKKENPSITILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWTAPNTSTDLFNIGLLFDEWRIAATKLE********SQLILTARFHYSPPANSYLLNSRQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPADKLVMCLPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNSTYEVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHNW
TLKKENPSITILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWTAPNTSTDLFNIGLLFDEWRIAATKLEAKNSSRQQSQLILTARFHYSPPANSYLLNSRQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPADKLVMCLPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNSTYEVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHNW
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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TLKKENPSITILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWTAPNTSTDLFNIGLLFDEWRIAATKLEAKNSSRQQSQLILTARFHYSPPANSYLLNSRQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPADKLVMCLPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNSTYEVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHNW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query282 2.2.26 [Sep-21-2011]
Q13231466 Chitotriosidase-1 OS=Homo yes no 0.943 0.570 0.282 1e-26
Q9D7Q1464 Chitotriosidase-1 OS=Mus yes no 0.936 0.568 0.277 4e-26
Q91XA9 473 Acidic mammalian chitinas no no 0.964 0.575 0.289 4e-25
Q9BZP6 476 Acidic mammalian chitinas no no 0.964 0.571 0.286 4e-24
Q15782390 Chitinase-3-like protein no no 0.957 0.692 0.283 4e-24
Q95M17 472 Acidic mammalian chitinas yes no 0.964 0.576 0.282 1e-23
Q6RY07 473 Acidic mammalian chitinas no no 0.968 0.577 0.276 3e-23
Q91Z98402 Chitinase-3-like protein no no 0.957 0.671 0.277 4e-23
P36222383 Chitinase-3-like protein no no 0.950 0.699 0.295 9e-23
Q5RBP6410 Chitinase-3-like protein no no 0.950 0.653 0.298 1e-22
>sp|Q13231|CHIT1_HUMAN Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1 Back     alignment and function desciption
 Score =  120 bits (301), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 142/294 (48%), Gaps = 28/294 (9%)

Query: 2   LKKENPSITILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWTA 61
           LKK NP +  LL+IG G +     ++ MV+ +++R++F++ +IR  R Y F GLD  W  
Sbjct: 83  LKKMNPKLKTLLAIG-GWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEY 141

Query: 62  PNTSTDLFNIGLLFDEWRIAATKLEAKNSSRQQSQLILTARFHYS---PPANSYL----- 113
           P +           D+ R      +  N+ +Q++Q     R   S   P   +Y+     
Sbjct: 142 PGSQGSP-----AVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYE 196

Query: 114 LNSRQRNLNWVHAVTASYY---EPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGL 170
           ++   +NL++V+ +   ++   E V T   +P       S    + + D  ++ W+++G 
Sbjct: 197 VDKIAQNLDFVNLMAYDFHGSWEKV-TGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGT 255

Query: 171 PADKLVMCLPFYGYAWRLVKPEDNGIGAAAAG-----PALHDSGLVTYKEINNHIKTYGP 225
           PA KL++ +P YG ++ L    D  +GA A G     P   + G++ Y E+ +       
Sbjct: 256 PASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQ 315

Query: 226 DVQVMYNSTYEVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDD 279
            +Q       +V Y   +  W GFDDVE+ + KV+Y K+K L G  VW +D DD
Sbjct: 316 RIQ-----DQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 364
Degrades chitin, chitotriose and chitobiose. May participate in the defense against nematodes and other pathogens. Isoform 3 has no enzymatic activity.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4
>sp|Q9D7Q1|CHIT1_MOUSE Chitotriosidase-1 OS=Mus musculus GN=Chit1 PE=1 SV=2 Back     alignment and function description
>sp|Q91XA9|CHIA_MOUSE Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2 Back     alignment and function description
>sp|Q9BZP6|CHIA_HUMAN Acidic mammalian chitinase OS=Homo sapiens GN=CHIA PE=1 SV=1 Back     alignment and function description
>sp|Q15782|CH3L2_HUMAN Chitinase-3-like protein 2 OS=Homo sapiens GN=CHI3L2 PE=1 SV=1 Back     alignment and function description
>sp|Q95M17|CHIA_BOVIN Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1 Back     alignment and function description
>sp|Q6RY07|CHIA_RAT Acidic mammalian chitinase OS=Rattus norvegicus GN=Chia PE=2 SV=1 Back     alignment and function description
>sp|Q91Z98|CH3L4_MOUSE Chitinase-3-like protein 4 OS=Mus musculus GN=Chi3l4 PE=1 SV=2 Back     alignment and function description
>sp|P36222|CH3L1_HUMAN Chitinase-3-like protein 1 OS=Homo sapiens GN=CHI3L1 PE=1 SV=2 Back     alignment and function description
>sp|Q5RBP6|CH3L1_PONAB Chitinase-3-like protein 1 OS=Pongo abelii GN=CHI3L1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
356558668 909 PREDICTED: uncharacterized protein LOC10 0.960 0.298 0.552 5e-72
224142425 763 predicted protein [Populus trichocarpa] 0.968 0.357 0.538 2e-71
359497679359 PREDICTED: chitotriosidase-1-like [Vitis 0.960 0.754 0.512 8e-67
359497026 738 PREDICTED: G-type lectin S-receptor-like 0.960 0.367 0.505 7e-65
255565055 721 conserved hypothetical protein [Ricinus 0.964 0.377 0.491 2e-64
359484771 781 PREDICTED: G-type lectin S-receptor-like 0.964 0.348 0.481 1e-62
224142429375 predicted protein [Populus trichocarpa] 0.968 0.728 0.484 1e-62
296088199 1130 unnamed protein product [Vitis vinifera] 0.854 0.213 0.452 2e-54
255565053 445 conserved hypothetical protein [Ricinus 0.776 0.492 0.480 5e-52
5814093 739 receptor-like kinase CHRK1 [Nicotiana ta 0.914 0.349 0.407 3e-50
>gi|356558668|ref|XP_003547625.1| PREDICTED: uncharacterized protein LOC100787480 [Glycine max] Back     alignment and taxonomy information
 Score =  276 bits (707), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 157/284 (55%), Positives = 191/284 (67%), Gaps = 13/284 (4%)

Query: 1   TLKKENPSITILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWT 60
           T+K++NPSIT LLSI  G + N ++ S MVS  S RK FI  SIRIARLYGFQGLD +W 
Sbjct: 83  TVKQKNPSITTLLSIAGG-NGNDTVLSLMVSKDSSRKYFIQSSIRIARLYGFQGLDLSW- 140

Query: 61  APNTSTDLFNIGLLFDEWRIAATKLEAKNSSRQQSQLILTARFHYSPPANS--YLLNSRQ 118
            P T +D+ N+G LF+EWR AA K EA N S Q   LILTA  H+ P  +S  Y + S Q
Sbjct: 141 VPETISDMNNMGRLFEEWR-AAAKSEAANDSTQV--LILTAAVHFRPGLDSASYPVESIQ 197

Query: 119 RNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPADKLVMC 178
            NLNWVH +T  Y+ P   NFTA  AALY  SS   + +TD  +K WI  G+ A KLV+ 
Sbjct: 198 NNLNWVHILTYDYHMPQLANFTAAHAALYDPSS---SVNTDNGIKEWIGSGVTASKLVLG 254

Query: 179 LPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNSTYEVN 238
           LPFYGYAW L  PEDN IGA+A GPA+  SG + YK+I  +I+ YG  V+  YN+TY VN
Sbjct: 255 LPFYGYAWNLRNPEDNAIGASATGPAIGKSGAMNYKDIKAYIQRYGGHVK--YNATYVVN 312

Query: 239 YCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHNW 282
           Y S    W G+DDVE V+MKV+YA+E KL GY VW+V YDD NW
Sbjct: 313 YFSNGSTWIGYDDVEVVKMKVSYARENKLLGYAVWQVPYDD-NW 355

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224142425|ref|XP_002324558.1| predicted protein [Populus trichocarpa] gi|222865992|gb|EEF03123.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359497679|ref|XP_003635605.1| PREDICTED: chitotriosidase-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359497026|ref|XP_003635401.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|255565055|ref|XP_002523520.1| conserved hypothetical protein [Ricinus communis] gi|223537227|gb|EEF38859.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|359484771|ref|XP_003633158.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224142429|ref|XP_002324560.1| predicted protein [Populus trichocarpa] gi|222865994|gb|EEF03125.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296088199|emb|CBI35714.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255565053|ref|XP_002523519.1| conserved hypothetical protein [Ricinus communis] gi|223537226|gb|EEF38858.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|5814093|gb|AAD52097.1|AF088885_1 receptor-like kinase CHRK1 [Nicotiana tabacum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
TAIR|locus:2134025379 ChiC "class V chitinase" [Arab 0.968 0.720 0.385 4.2e-47
TAIR|locus:2134030366 AT4G19820 [Arabidopsis thalian 0.968 0.745 0.378 1.3e-45
TAIR|locus:2134015398 AT4G19800 [Arabidopsis thalian 0.964 0.683 0.353 3.1e-44
TAIR|locus:2133940362 AT4G19750 [Arabidopsis thalian 0.960 0.748 0.367 1.7e-41
TAIR|locus:2133955369 AT4G19760 [Arabidopsis thalian 0.964 0.737 0.359 3.6e-41
TAIR|locus:2133970261 AT4G19770 [Arabidopsis thalian 0.836 0.904 0.378 3.7e-39
TAIR|locus:2134010363 AT4G19720 [Arabidopsis thalian 0.943 0.732 0.348 2.7e-36
TAIR|locus:2134020332 AT4G19730 [Arabidopsis thalian 0.893 0.759 0.359 1.5e-35
ZFIN|ZDB-GENE-040426-2891 471 chia.3 "chitinase, acidic.3" [ 0.950 0.569 0.304 1.1e-25
TAIR|locus:2133930211 AT4G19740 [Arabidopsis thalian 0.695 0.928 0.350 2.9e-25
TAIR|locus:2134025 ChiC "class V chitinase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 109/283 (38%), Positives = 154/283 (54%)

Query:     1 TLKKENPSITILLSIGQGMDTXXXXXXXXXXXXXHRKSFIDCSIRIARLYGFQGLDFAWT 60
             T+++ NPS+  LLSIG G+                RKSFID SIR+AR YGF GLD  W 
Sbjct:    82 TVQRRNPSVKTLLSIGGGI-ADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWE 140

Query:    61 APNTSTDLFNIGLLFDEWRIAATKLEAKNSSRQQSQLILTARFHYSPPANS--YLLNSRQ 118
              P+++T++ N G L  EWR A     A+ SS  + +L+L A   YS    S  Y +++  
Sbjct:   141 YPSSATEMTNFGTLLREWRSAVV---AEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVA 197

Query:   119 RNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPADKLVMC 178
              +L+WV+ +   +Y P  +  T PPAAL+  S+ G   S D   ++WI+ GLPA K V+ 
Sbjct:   198 SSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAG--PSGDAGTRSWIQAGLPAKKAVLG 255

Query:   179 LPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNSTYEVN 238
              P+YGYAWRL     +   A   G A+   G + Y +I   I   G     +YNST   +
Sbjct:   256 FPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNG--ATTVYNSTVVGD 313

Query:   239 YCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHN 281
             YC     W G+DD +++  KV YAK++ L GYF W V  DD++
Sbjct:   314 YCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNS 356
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0004568 "chitinase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0006032 "chitin catabolic process" evidence=IDA
GO:0008843 "endochitinase activity" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP
GO:0009737 "response to abscisic acid stimulus" evidence=IEP
GO:0009753 "response to jasmonic acid stimulus" evidence=IEP
GO:0035885 "exochitinase activity" evidence=IDA
TAIR|locus:2134030 AT4G19820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134015 AT4G19800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133940 AT4G19750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133955 AT4G19760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133970 AT4G19770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134010 AT4G19720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134020 AT4G19730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2891 chia.3 "chitinase, acidic.3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
TAIR|locus:2133930 AT4G19740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00005604001
SubName- Full=Chromosome undetermined scaffold_155, whole genome shotgun sequence; (359 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
cd02879299 cd02879, GH18_plant_chitinase_class_V, The class V 2e-74
smart00636334 smart00636, Glyco_18, Glyco_18 domain 4e-56
pfam00704325 pfam00704, Glyco_hydro_18, Glycosyl hydrolases fam 1e-51
cd02872362 cd02872, GH18_chitolectin_chitotriosidase, This co 6e-39
cd02873413 cd02873, GH18_IDGF, The IDGF's (imaginal disc grow 9e-23
cd06548322 cd06548, GH18_chitinase, The GH18 (glycosyl hydrol 4e-19
COG3325441 COG3325, ChiA, Chitinase [Carbohydrate transport a 4e-18
cd02874313 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragm 5e-07
cd00598210 cd00598, GH18_chitinase-like, The GH18 (glycosyl h 2e-05
cd06549298 cd06549, GH18_trifunctional, GH18 domain of an unc 9e-05
COG3858423 COG3858, COG3858, Predicted glycosyl hydrolase [Ge 0.001
cd02875358 cd02875, GH18_chitobiase, Chitobiase (also known a 0.004
>gnl|CDD|119358 cd02879, GH18_plant_chitinase_class_V, The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information 
 Score =  229 bits (586), Expect = 2e-74
 Identities = 109/288 (37%), Positives = 158/288 (54%), Gaps = 55/288 (19%)

Query: 1   TLKKENPSITILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWT 60
           T+K++NPS+  LLSIG G  ++ S +++M S+ + RK+FI+ SI++AR YGF GLD  W 
Sbjct: 59  TVKRKNPSVKTLLSIGGG-GSDSSAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWE 117

Query: 61  APNTSTDLFNIGLLFDEWRIAATKLEAKNSSRQQSQLILTARFHYSP------PANSYLL 114
            P++  ++ N G L +EWR AA K EA++S R    L+LTA  ++SP       + SY +
Sbjct: 118 FPSSQVEMENFGKLLEEWR-AAVKDEARSSGR--PPLLLTAAVYFSPILFLSDDSVSYPI 174

Query: 115 NSRQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPADK 174
            +  +NL+WV+ +   YY    +N T P AALY  +S     STD  +K+WI+ G+PA K
Sbjct: 175 EAINKNLDWVNVMAYDYYGSWESNTTGPAAALYDPNSN---VSTDYGIKSWIKAGVPAKK 231

Query: 175 LVMCLPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNST 234
           LV+ LP YG AW L                                          Y++T
Sbjct: 232 LVLGLPLYGRAWTL------------------------------------------YDTT 249

Query: 235 YEVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHNW 282
              +Y      W G+DDV+++ +KV YAK+K L GYF W V YDD+NW
Sbjct: 250 TVSSYVYAGTTWIGYDDVQSIAVKVKYAKQKGLLGYFAWAVGYDDNNW 297

The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. Length = 299
>gnl|CDD|214753 smart00636, Glyco_18, Glyco_18 domain Back     alignment and domain information
>gnl|CDD|216071 pfam00704, Glyco_hydro_18, Glycosyl hydrolases family 18 Back     alignment and domain information
>gnl|CDD|119351 cd02872, GH18_chitolectin_chitotriosidase, This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information
>gnl|CDD|119352 cd02873, GH18_IDGF, The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>gnl|CDD|119365 cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>gnl|CDD|225862 COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|119353 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination Back     alignment and domain information
>gnl|CDD|119349 cd00598, GH18_chitinase-like, The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>gnl|CDD|119366 cd06549, GH18_trifunctional, GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain Back     alignment and domain information
>gnl|CDD|226376 COG3858, COG3858, Predicted glycosyl hydrolase [General function prediction only] Back     alignment and domain information
>gnl|CDD|119354 cd02875, GH18_chitobiase, Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 282
cd02872362 GH18_chitolectin_chitotriosidase This conserved do 100.0
cd02879299 GH18_plant_chitinase_class_V The class V plant chi 100.0
cd02873413 GH18_IDGF The IDGF's (imaginal disc growth factors 100.0
smart00636334 Glyco_18 Glycosyl hydrolase family 18. 100.0
KOG2806432 consensus Chitinase [Carbohydrate transport and me 100.0
COG3325441 ChiA Chitinase [Carbohydrate transport and metabol 100.0
cd06548322 GH18_chitinase The GH18 (glycosyl hydrolases, fami 100.0
cd02878345 GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin 100.0
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 100.0
PF00704343 Glyco_hydro_18: Glycosyl hydrolases family 18; Int 100.0
cd02874313 GH18_CFLE_spore_hydrolase Cortical fragment-lytic 100.0
cd02876318 GH18_SI-CLP Stabilin-1 interacting chitinase-like 100.0
cd06549298 GH18_trifunctional GH18 domain of an uncharacteriz 100.0
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 100.0
COG3858423 Predicted glycosyl hydrolase [General function pre 100.0
cd00598210 GH18_chitinase-like The GH18 (glycosyl hydrolase, 99.97
cd06544253 GH18_narbonin Narbonin is a plant 2S protein from 99.96
cd06546256 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 99.94
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 99.94
KOG2091392 consensus Predicted member of glycosyl hydrolase f 99.93
cd02877280 GH18_hevamine_XipI_class_III This conserved domain 99.9
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 99.9
cd06543294 GH18_PF-ChiA-like PF-ChiA is an uncharacterized ch 99.81
COG3469332 Chitinase [Carbohydrate transport and metabolism] 99.56
KOG4701 568 consensus Chitinase [Cell wall/membrane/envelope b 99.18
cd06547339 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG 98.86
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 98.18
PF03644311 Glyco_hydro_85: Glycosyl hydrolase family 85 ; Int 98.1
PF11340181 DUF3142: Protein of unknown function (DUF3142); In 97.95
PF13200316 DUF4015: Putative glycosyl hydrolase domain 97.11
KOG2331 526 consensus Predicted glycosylhydrolase [General fun 96.95
COG1306400 Uncharacterized conserved protein [Function unknow 94.29
TIGR01370315 cysRS possible cysteinyl-tRNA synthetase, Methanoc 92.48
COG1649418 Uncharacterized protein conserved in bacteria [Fun 91.84
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 89.14
PF1488579 GHL15: Hypothetical glycosyl hydrolase family 15 88.17
PF13199559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 88.11
cd02801231 DUS_like_FMN Dihydrouridine synthase-like (DUS-lik 87.03
TIGR02103 898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 84.31
cd04740296 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c 84.14
PF14883294 GHL13: Hypothetical glycosyl hydrolase family 13 83.29
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 82.46
PLN02495385 oxidoreductase, acting on the CH-CH group of donor 81.82
cd04733338 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN 81.59
PRK07259301 dihydroorotate dehydrogenase 1B; Reviewed 81.41
TIGR00742318 yjbN tRNA dihydrouridine synthase A. Members of th 81.14
PRK08318420 dihydropyrimidine dehydrogenase subunit B; Validat 80.14
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information 
Probab=100.00  E-value=1.4e-60  Score=432.79  Aligned_cols=268  Identities=32%  Similarity=0.597  Sum_probs=239.4

Q ss_pred             CccccCCCCeEEEEEcCCCCCCCccchhhhCChHHHHHHHHHHHHHHHHcCCCeEEEEeecCCC----chhHhhHHHHHH
Q 042934            1 TLKKENPSITILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWTAPNT----STDLFNIGLLFD   76 (282)
Q Consensus         1 ~lk~~~~~~kvl~siGg~~~~~~~~~~~~~~~~~~r~~f~~~i~~~l~~~~~DGidid~e~~~~----~~~~~~~~~fl~   76 (282)
                      +||+++|++||++|||||.. ++..|+.++++++.|++|++++++++++|+|||||||||+|..    ++++.+|+.||+
T Consensus        63 ~lk~~~p~lkvlisiGG~~~-~~~~f~~~~~~~~~r~~fi~~iv~~l~~~~~DGidiDwE~p~~~~~~~~d~~~~~~ll~  141 (362)
T cd02872          63 ALKEKNPNLKTLLAIGGWNF-GSAKFSAMAASPENRKTFIKSAIAFLRKYGFDGLDLDWEYPGQRGGPPEDKENFVTLLK  141 (362)
T ss_pred             HHHhhCCCceEEEEEcCCCC-CcchhHHHhCCHHHHHHHHHHHHHHHHHcCCCCeeeeeeccccCCCCHHHHHHHHHHHH
Confidence            37899999999999999986 5668999999999999999999999999999999999999974    478899999999


Q ss_pred             HHHHHHhhHHHhhccCCCccEEEEEEeccCCCC--CccChhhhhccccEEEeeeccccCCCCCCCCCCCCcccCCCCC--
Q 042934           77 EWRIAATKLEAKNSSRQQSQLILTARFHYSPPA--NSYLLNSRQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSG--  152 (282)
Q Consensus        77 ~lr~~~l~~~~~~~g~~~~~~~ls~a~~~~~~~--~~~~~~~l~~~vD~v~vm~yd~~~~~~~~~~~~~spl~~~~~~--  152 (282)
                      +||+ +|+..       +++++||+++|+.+..  ..|++++|.++||+|+||+||++++| ...++|+|||+.....  
T Consensus       142 ~lr~-~l~~~-------~~~~~ls~av~~~~~~~~~~~d~~~l~~~vD~v~vmtYD~~~~~-~~~~g~~spl~~~~~~~~  212 (362)
T cd02872         142 ELRE-AFEPE-------APRLLLTAAVSAGKETIDAAYDIPEISKYLDFINVMTYDFHGSW-EGVTGHNSPLYAGSADTG  212 (362)
T ss_pred             HHHH-HHHhh-------CcCeEEEEEecCChHHHhhcCCHHHHhhhcceEEEecccCCCCC-CCCCCCCCCCCCCCCCcc
Confidence            9999 99854       3469999999987654  56899999999999999999999987 4568999999853321  


Q ss_pred             -CCcccHHHHHHHHHHCCCCCCceeeecccceeeeeecCCCCCCCCccccCCC-----CCCCCccchHHHHHhhhhCCCC
Q 042934          153 -GFARSTDQVLKAWIERGLPADKLVMCLPFYGYAWRLVKPEDNGIGAAAAGPA-----LHDSGLVTYKEINNHIKTYGPD  226 (282)
Q Consensus       153 -~~~~~i~~~v~~~~~~g~p~~Kivlglp~yG~~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~y~~i~~~l~~~~~~  226 (282)
                       ....+++.+|+.|++.|+|++||+||||+||+.|++.+..+.++++|+.+++     +...|.++|.|||+++ ..+  
T Consensus       213 ~~~~~~v~~~v~~~~~~gvp~~KlvlGlp~YG~~~~~~~~~~~~~g~~~~g~~~~g~~~~~~g~~~y~ei~~~~-~~~--  289 (362)
T cd02872         213 DQKYLNVDYAIKYWLSKGAPPEKLVLGIPTYGRSFTLASPSNTGVGAPASGPGTAGPYTREAGFLAYYEICEFL-KSG--  289 (362)
T ss_pred             ccccccHHHHHHHHHHcCCCHHHeEeccccccceeeecCCccCCCCCccCCCCCCCCCcCCCccchHHHHHHhh-cCC--
Confidence             1246899999999999999999999999999999999888888888887654     2467899999999988 667  


Q ss_pred             eEEEEeCceeeEEEEeCCEEEEeCCHHHHHHHHHHHhhCCCceEEEEeecCCCCC
Q 042934          227 VQVMYNSTYEVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHN  281 (282)
Q Consensus       227 ~~~~~D~~~~~~y~~~~~~~i~ydd~~S~~~K~~~~~~~glgGv~~W~l~~Dd~~  281 (282)
                      +...||+.+.+||+|.+++||+|||++|++.|++|++++||||+++|+|++||++
T Consensus       290 ~~~~~D~~~~~~y~~~~~~~v~ydd~~Si~~K~~~~~~~~lgGv~iW~l~~DD~~  344 (362)
T cd02872         290 WTVVWDDEQKVPYAYKGNQWVGYDDEESIALKVQYLKSKGLGGAMVWSIDLDDFR  344 (362)
T ss_pred             cEEEEeCCcceeEEEECCEEEEeCCHHHHHHHHHHHHhCCCceEEEEeeecCcCC
Confidence            9999999999999998899999999999999999999999999999999999964

The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>smart00636 Glyco_18 Glycosyl hydrolase family 18 Back     alignment and domain information
>KOG2806 consensus Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3325 ChiA Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>cd02878 GH18_zymocin_alpha Zymocin, alpha subunit Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination Back     alignment and domain information
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome Back     alignment and domain information
>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>COG3858 Predicted glycosyl hydrolase [General function prediction only] Back     alignment and domain information
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L Back     alignment and domain information
>cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>KOG2091 consensus Predicted member of glycosyl hydrolase family 18 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain Back     alignment and domain information
>COG3469 Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PF03644 Glyco_hydro_85: Glycosyl hydrolase family 85 ; InterPro: IPR005201 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF11340 DUF3142: Protein of unknown function (DUF3142); InterPro: IPR021488 This bacterial family of proteins has no known function Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>KOG2331 consensus Predicted glycosylhydrolase [General function prediction only] Back     alignment and domain information
>COG1306 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>PF14885 GHL15: Hypothetical glycosyl hydrolase family 15 Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>cd02801 DUS_like_FMN Dihydrouridine synthase-like (DUS-like) FMN-binding domain Back     alignment and domain information
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>PF14883 GHL13: Hypothetical glycosyl hydrolase family 13 Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>PLN02495 oxidoreductase, acting on the CH-CH group of donors Back     alignment and domain information
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2 Back     alignment and domain information
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed Back     alignment and domain information
>TIGR00742 yjbN tRNA dihydrouridine synthase A Back     alignment and domain information
>PRK08318 dihydropyrimidine dehydrogenase subunit B; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
3aqu_A356 Crystal Structure Of A Class V Chitinase From Arabi 3e-48
3alg_A353 Crystal Structure Of Class V Chitinase (E115q Mutan 9e-44
3alf_A353 Crystal Structure Of Class V Chitinase From Nicotia 9e-44
1guv_A366 Structure Of Human Chitotriosidase Length = 366 1e-25
1hkk_A364 High Resoultion Crystal Structure Of Human Chitinas 2e-25
1hki_A365 Crystal Structure Of Human Chitinase In Complex Wit 2e-25
1lg1_A365 Crystal Structure Of Human Chitotriosidase In Compl 2e-25
1waw_A445 Specificity And Affinity Of Natural Product Cyclope 5e-25
4ay1_A365 Human Ykl-39 Is A Pseudo-Chitinase With Retained Ch 1e-22
3fxy_A395 Acidic Mammalian Chinase, Catalytic Domain Length = 1e-22
2ybt_A381 Crystal Structure Of Human Acidic Chitinase In Comp 2e-22
1hjv_A362 Crystal Structure Of Hcgp-39 In Complex With Chitin 5e-21
1e9l_A377 The Crystal Structure Of Novel Mammalian Lectin Ym1 1e-18
1ljy_A361 Crystal Structure Of A Novel Regulatory 40 Kda Mamm 2e-18
1sr0_A361 Crystal Structure Of Signalling Protein From Sheep( 7e-18
2esc_A361 Crystal Structure Of A 40 Kda Protective Signalling 1e-17
1owq_A361 Crystal Structure Of A 40 Kda Signalling Protein (S 1e-17
1syt_A361 Crystal Structure Of Signalling Protein From Goat S 1e-17
1xhg_A361 Crystal Structure Of A 40 Kda Signalling Protein Fr 1e-17
2pi6_A361 Crystal Structure Of The Sheep Signalling Glycoprot 2e-17
1zbv_A361 Crystal Structure Of The Goat Signalling Protein (S 3e-17
1tfv_A361 Crystal Structure Of A Buffalo Signaling Glycoprote 1e-16
3g6l_A406 The Crystal Structure Of A Chitinase Crchi1 From Th 8e-14
1w9p_A433 Specificity And Affinity Of Natural Product Cyclope 2e-11
1wno_A395 Crystal Structure Of A Native Chitinase From Asperg 2e-11
1itx_A419 Catalytic Domain Of Chitinase A1 From Bacillus Circ 3e-11
1jnd_A420 Crystal Structure Of Imaginal Disc Growth Factor-2 3e-11
1ll7_A392 Structure Of The E171q Mutant Of C. Immitis Chitina 3e-10
1ll6_A392 Structure Of The D169n Mutant Of C. Immitis Chitina 3e-10
1d2k_A392 C. Immitis Chitinase 1 At 2.2 Angstroms Resolution 3e-10
1h0g_A499 Complex Of A Chitinase With The Natural Product Cyc 2e-08
1ur9_A499 Interactions Of A Family 18 Chitinase With The Desi 2e-08
1ogb_A499 Chitinase B From Serratia Marcescens Mutant D142n L 2e-08
1e6n_B499 Chitinase B From Serratia Marcescens Inactive Mutan 2e-08
1e15_A499 Chitinase B From Serratia Marcescens Length = 499 2e-08
1e6z_A498 Chitinase B From Serratia Marcescens Wildtype In Co 2e-08
1goi_A499 Crystal Structure Of The D140n Mutant Of Chitinase 8e-08
3ars_A584 Crystal Structure Analysis Of Chitinase A From Vibr 3e-07
1eib_A540 Crystal Structure Of Chitinase A Mutant D313a Compl 3e-07
2wly_A548 Chitinase A From Serratia Marcescens Atcc990 In Com 5e-07
2wk2_A540 Chitinase A From Serratia Marcescens Atcc990 In Com 5e-07
1rd6_A563 Crystal Structure Of S. Marcescens Chitinase A Muta 7e-07
1k9t_A540 Chitinase A Complexed With Tetra-N-Acetylchitotrios 1e-06
1ffr_A540 Crystal Structure Of Chitinase A Mutant Y390f Compl 2e-06
1ehn_A540 Crystal Structure Of Chitinase A Mutant E315q Compl 2e-06
1edq_A540 Crystal Structure Of Chitinase A From S. Marcescens 2e-06
1ctn_A540 Crystal Structure Of A Bacterial Chitinase At 2.3 A 2e-06
1nh6_A540 Structure Of S. Marcescens Chitinase A, E315l, Comp 2e-06
3b9a_A584 Crystal Structure Of Vibrio Harveyi Chitinase A Com 2e-06
3b8s_A584 Crystal Structure Of Wild-Type Chitinase A From Vib 3e-06
>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  188 bits (478), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 155/283 (54%), Gaps = 10/283 (3%)
Query: 1   TLKKENPSITILLSIGQGMDTXXXXXXXXXXXXXHRKSFIDCSIRIARLYGFQGLDFAWT 60
           T+++ NPS+  LLSIG G+                RKSFID SIR+AR YGF GLD  W 
Sbjct: 59  TVQRRNPSVKTLLSIGGGI-ADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWE 117
Query: 61  APNTSTDLFNIGLLFDEWRIAATKLEAKNSSRQQSQLILTARFHYSPPANS--YLLNSRQ 118
            P+++T++ N G L  EWR A   + A+ SS  + +L+L A   YS    S  Y +++  
Sbjct: 118 YPSSATEMTNFGTLLREWRSA---VVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVA 174
Query: 119 RNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPADKLVMC 178
            +L+WV+ +   +Y P  +  T PPAAL+  S+ G   S D   ++WI+ GLPA K V+ 
Sbjct: 175 SSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAG--PSGDAGTRSWIQAGLPAKKAVLG 232
Query: 179 LPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNSTYEVN 238
            P+YGYAWRL     +   A   G A+   G + Y +I   I   G     +YNST   +
Sbjct: 233 FPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNG--ATTVYNSTVVGD 290
Query: 239 YCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHN 281
           YC     W G+DD +++  KV YAK++ L GYF W V  DD++
Sbjct: 291 YCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNS 333
>pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 Length = 353 Back     alignment and structure
>pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum Length = 353 Back     alignment and structure
>pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase Length = 366 Back     alignment and structure
>pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin Length = 364 Back     alignment and structure
>pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With Glucoallosamidin B Length = 365 Back     alignment and structure
>pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With Chitobiose Length = 365 Back     alignment and structure
>pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitor Argadin Against Human Chitinase Length = 445 Back     alignment and structure
>pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained Chitooligosaccharide Binding Properties Length = 365 Back     alignment and structure
>pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain Length = 395 Back     alignment and structure
>pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex With Bisdionin C Length = 381 Back     alignment and structure
>pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin Tetramer Length = 362 Back     alignment and structure
>pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1 Suggests A Saccharide Binding Site Length = 377 Back     alignment and structure
>pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary Gland Protein (Mgp-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40) At 3.0a Resolution Using Crystal Grown In The Presence Of Polysaccharides Length = 361 Back     alignment and structure
>pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling Protein From Bovine (Spc-40) At 2.1 A Resolution Length = 361 Back     alignment and structure
>pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40 In The Presense Of N,n',n''-triacetyl-chitotriose At 2.6a Resolution Length = 361 Back     alignment and structure
>pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From Porcine (spp-40) At 2.89a Resolution Length = 361 Back     alignment and structure
>pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein (Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a Resolution Reveals Specific Binding Characteristics Of Sps-40 Length = 361 Back     alignment and structure
>pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40) Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a Resolution Length = 361 Back     alignment and structure
>pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein (Spb-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The Nematophagous Fungus Clonostachys Rosea Length = 406 Back     alignment and structure
>pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human And Bacterial Chitinasefra Length = 433 Back     alignment and structure
>pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus Fumigatus Yj- 407 Length = 395 Back     alignment and structure
>pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 Length = 419 Back     alignment and structure
>pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2 Length = 420 Back     alignment and structure
>pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1 Length = 392 Back     alignment and structure
>pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1 Length = 392 Back     alignment and structure
>pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution Length = 392 Back     alignment and structure
>pdb|1H0G|A Chain A, Complex Of A Chitinase With The Natural Product Cyclopentapeptide Argadin From Clonostachys Length = 499 Back     alignment and structure
>pdb|1UR9|A Chain A, Interactions Of A Family 18 Chitinase With The Designed Inhibitor Hm508, And Its Degradation Product, Chitobiono-Delta-Lactone Length = 499 Back     alignment and structure
>pdb|1OGB|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n Length = 499 Back     alignment and structure
>pdb|1E6N|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q In Complex With N-Acetylglucosamine-Pentamer Length = 499 Back     alignment and structure
>pdb|1E15|A Chain A, Chitinase B From Serratia Marcescens Length = 499 Back     alignment and structure
>pdb|1E6Z|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate Length = 498 Back     alignment and structure
>pdb|1GOI|A Chain A, Crystal Structure Of The D140n Mutant Of Chitinase B From Serratia Marcescens At 1.45 A Resolution Length = 499 Back     alignment and structure
>pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio Harveyi With Novel Inhibitors - Apo Structure Of Mutant W275g Length = 584 Back     alignment and structure
>pdb|1EIB|A Chain A, Crystal Structure Of Chitinase A Mutant D313a Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 Back     alignment and structure
>pdb|2WLY|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline. Length = 548 Back     alignment and structure
>pdb|2WK2|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline Dithioamide Length = 540 Back     alignment and structure
>pdb|1RD6|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant W167a Length = 563 Back     alignment and structure
>pdb|1K9T|A Chain A, Chitinase A Complexed With Tetra-N-Acetylchitotriose Length = 540 Back     alignment and structure
>pdb|1FFR|A Chain A, Crystal Structure Of Chitinase A Mutant Y390f Complexed With Hexa-n- Acetylchitohexaose (nag)6 Length = 540 Back     alignment and structure
>pdb|1EHN|A Chain A, Crystal Structure Of Chitinase A Mutant E315q Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 Back     alignment and structure
>pdb|1EDQ|A Chain A, Crystal Structure Of Chitinase A From S. Marcescens At 1.55 Angstroms Length = 540 Back     alignment and structure
>pdb|1CTN|A Chain A, Crystal Structure Of A Bacterial Chitinase At 2.3 Angstroms Resolution Length = 540 Back     alignment and structure
>pdb|1NH6|A Chain A, Structure Of S. Marcescens Chitinase A, E315l, Complex With Hexasaccharide Length = 540 Back     alignment and structure
>pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed With Hexasaccharide Length = 584 Back     alignment and structure
>pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio Harveyi Length = 584 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 3e-71
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 9e-70
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 1e-59
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 6e-58
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 3e-57
1wb0_A445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 8e-55
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 3e-54
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 2e-43
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 3e-43
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 5e-43
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 6e-41
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 3e-40
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 3e-40
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 6e-39
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 4e-38
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 8e-38
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 3e-34
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 3e-33
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 6e-31
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 7e-31
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 4e-23
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 9e-22
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 5e-11
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 6e-06
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 2e-05
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 2e-04
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 2e-04
3ian_A321 Chitinase; structural genomics, hydrolase, glycosi 5e-04
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Length = 356 Back     alignment and structure
 Score =  222 bits (568), Expect = 3e-71
 Identities = 113/283 (39%), Positives = 163/283 (57%), Gaps = 10/283 (3%)

Query: 1   TLKKENPSITILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWT 60
           T+++ NPS+  LLSIG G   + + Y+SM SN + RKSFID SIR+AR YGF GLD  W 
Sbjct: 59  TVQRRNPSVKTLLSIG-GGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWE 117

Query: 61  APNTSTDLFNIGLLFDEWRIAATKLEAKNSSRQQSQLILTARFHYSPP--ANSYLLNSRQ 118
            P+++T++ N G L  EWR A   + A+ SS  + +L+L A   YS    +  Y +++  
Sbjct: 118 YPSSATEMTNFGTLLREWRSA---VVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVA 174

Query: 119 RNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPADKLVMC 178
            +L+WV+ +   +Y P  +  T PPAAL+  S+ G   S D   ++WI+ GLPA K V+ 
Sbjct: 175 SSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAGP--SGDAGTRSWIQAGLPAKKAVLG 232

Query: 179 LPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNSTYEVN 238
            P+YGYAWRL     +   A   G A+   G + Y +I   I   G     +YNST   +
Sbjct: 233 FPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNG--ATTVYNSTVVGD 290

Query: 239 YCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHN 281
           YC     W G+DD +++  KV YAK++ L GYF W V  DD++
Sbjct: 291 YCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNS 333
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Length = 353 Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Length = 365 Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Length = 395 Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Length = 377 Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445 Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Length = 361 Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Length = 406 Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Length = 392 Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Length = 433 Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Length = 419 Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Length = 420 Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Length = 540 Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Length = 499 Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Length = 435 Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Length = 420 Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Length = 312 Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Length = 574 Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Length = 584 Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Length = 319 Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Length = 393 Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Length = 275 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Length = 333 Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Length = 302 Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Length = 290 Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Length = 271 Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Length = 290 Back     alignment and structure
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Length = 321 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 100.0
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 100.0
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 100.0
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 100.0
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 100.0
1wb0_A445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 100.0
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 100.0
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 100.0
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 100.0
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 100.0
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 100.0
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 100.0
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 100.0
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 100.0
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 100.0
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 100.0
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 100.0
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 100.0
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 100.0
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 100.0
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 100.0
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 100.0
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 100.0
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 99.97
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 99.97
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 99.97
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 99.97
3ian_A321 Chitinase; structural genomics, hydrolase, glycosi 99.96
2hvm_A273 Hevamine; hydrolase, chitinase/lysozyme; 1.80A {He 99.95
2gsj_A271 Protein PPL-2; mimosoideae, chimerolectin, endochi 99.95
4ac1_X283 Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g 99.95
2uy2_A294 Endochitinase; carbohydrate metabolism, polysaccha 99.94
2xtk_A310 CHIA1, class III chitinase CHIA1; hydrolase, GH18; 99.94
1cnv_A299 Concanavalin B; plant chitinase, chitin binding pr 99.93
1eok_A290 Endo-beta-N-acetylglucosaminidase F3; alpha/beta-b 99.91
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 99.89
1ta3_A274 XIP-1, xylanase inhibitor protein I; beta alpha ba 99.88
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 99.84
3mu7_A273 XAIP-II, xylanase and alpha-amylase inhibitor prot 99.82
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 99.8
2dsk_A311 Chitinase; catalytic domain, active domain, crysta 99.79
2w91_A 653 Endo-beta-N-acetylglucosaminidase D; hydrolase, N- 97.93
2vtf_A 626 Endo-beta-N-acetylglucosaminidase; hydrolase, fami 97.92
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 95.38
3vmn_A 643 Dextranase; TIM barrel, immunoglobrin fold, greek- 91.33
3hgj_A349 Chromate reductase; TIM barrel, oxidoreductase; HE 84.47
3kru_A343 NADH:flavin oxidoreductase/NADH oxidase; homotetra 82.37
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 81.61
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 80.73
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-66  Score=469.48  Aligned_cols=271  Identities=41%  Similarity=0.757  Sum_probs=250.1

Q ss_pred             ccccCCCCeEEEEEcCCCCCCCccchhhhCChHHHHHHHHHHHHHHHHcCCCeEEEEeecCCCchhHhhHHHHHHHHHHH
Q 042934            2 LKKENPSITILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWTAPNTSTDLFNIGLLFDEWRIA   81 (282)
Q Consensus         2 lk~~~~~~kvl~siGg~~~~~~~~~~~~~~~~~~r~~f~~~i~~~l~~~~~DGidid~e~~~~~~~~~~~~~fl~~lr~~   81 (282)
                      ||+++|++|+|+|||||+. ++..|+.++++++.|++|++++++++++|+|||||||||+|..++++.+|+.||++||+ 
T Consensus        59 lk~~~~~lkvllsiGG~~~-~~~~f~~~~~~~~~r~~fi~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~-  136 (353)
T 3alf_A           59 VQRKNPSVKTFLSIAGGRA-NSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAADMTNLGTLLNEWRT-  136 (353)
T ss_dssp             HHHHCTTCEEEEEEECTTS-CHHHHHHHHHSHHHHHHHHHHHHHHHHHHTCSEEEEECCCCCSHHHHHHHHHHHHHHHH-
T ss_pred             HHhhCCCCeEEEEECCCCC-CchhHHHHhcCHHHHHHHHHHHHHHHHHcCCCeEEEEeeecCChhHHHHHHHHHHHHHH-
Confidence            7889999999999999985 57899999999999999999999999999999999999999777899999999999999 


Q ss_pred             HhhHHHhhccCCCccEEEEEEeccCCCC--CccChhhhhccccEEEeeeccccCC-CCCCCCCCCCcccCCCCCCCcccH
Q 042934           82 ATKLEAKNSSRQQSQLILTARFHYSPPA--NSYLLNSRQRNLNWVHAVTASYYEP-VSTNFTAPPAALYGSSSGGFARST  158 (282)
Q Consensus        82 ~l~~~~~~~g~~~~~~~ls~a~~~~~~~--~~~~~~~l~~~vD~v~vm~yd~~~~-~~~~~~~~~spl~~~~~~~~~~~i  158 (282)
                      +|++..+..|  +++++||+++|+.+..  ..|++++|.+++|||+||+||++++ |.+..+||+|||+++..   ..++
T Consensus       137 ~l~~~~~~~~--~~~~~Ls~a~~~~~~~~~~~~d~~~l~~~vD~invMtYD~~g~~w~~~~~g~~a~l~~~~~---~~~~  211 (353)
T 3alf_A          137 AINTEARNSG--RAALLLTAAVSNSPRVNGLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVN---HVSG  211 (353)
T ss_dssp             HHHHHHHHHC--SCCCEEEEEEESSSEETTEECCHHHHHHHCSEEEEECCCSSCTTTSTTBCCCSSCSCCTTT---CCSH
T ss_pred             HHHHhhhhcC--CCceEEEEecccCchhhhcCCCHHHHhhhccEEEEEEeeccCCCCCCCCCCCCCcCcCCCC---CccH
Confidence            9998877777  5679999999976543  4689999999999999999999998 76578999999997765   6799


Q ss_pred             HHHHHHHHHCCCCCCceeeecccceeeeeecCCCCCCCCccccCC---CCCCCCccchHHHHHhhhhCCCCeEEEEeCce
Q 042934          159 DQVLKAWIERGLPADKLVMCLPFYGYAWRLVKPEDNGIGAAAAGP---ALHDSGLVTYKEINNHIKTYGPDVQVMYNSTY  235 (282)
Q Consensus       159 ~~~v~~~~~~g~p~~Kivlglp~yG~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~y~~i~~~l~~~~~~~~~~~D~~~  235 (282)
                      +.+|+.|++.|+|++||+||||+|||.|++.++.++++++|+.|+   ++.++|.++|.|||+++...+  +...||+.+
T Consensus       212 ~~~v~~~~~~gvp~~KlvlGip~YGr~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~y~ei~~~~~~~g--~~~~~D~~~  289 (353)
T 3alf_A          212 SDGINAWIQAGVPTKKLVLGIPFYGYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESR--ATTVYNATI  289 (353)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEEESEEEEEEESCTTCCSTTCBEEEECTTSCTTTCEEEHHHHHHHHHHHT--CEEEEETTT
T ss_pred             HHHHHHHHHcCCChHHEEEEeCCceeeeeccCCcCCCCCCCCCCCCCCCCCCCCeEcHHHHHHHHhhCC--CeEEEcccc
Confidence            999999999999999999999999999999998999999998776   556679999999999998888  999999999


Q ss_pred             eeEEEEeCCEEEEeCCHHHHHHHHHHHhhCCCceEEEEeecCCCCCC
Q 042934          236 EVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHNW  282 (282)
Q Consensus       236 ~~~y~~~~~~~i~ydd~~S~~~K~~~~~~~glgGv~~W~l~~Dd~~~  282 (282)
                      .+||+|.+++||+|||++|+++|++||+++||||+++|+|++|| +|
T Consensus       290 ~~~y~y~~~~~v~ydd~~Si~~K~~~~~~~gLgGv~~W~l~~Dd-~~  335 (353)
T 3alf_A          290 VGDYCYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQ-NW  335 (353)
T ss_dssp             TEEEEEETTEEEEECCHHHHHHHHHHHHHTTCSEEEEECGGGSS-TT
T ss_pred             ceEEEEeCCEEEEcCCHHHHHHHHHHHHhCCCCEEEEEeccCCC-Cc
Confidence            99999988899999999999999999999999999999999997 55
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Back     alignment and structure
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Back     alignment and structure
>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A* Back     alignment and structure
>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala} Back     alignment and structure
>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} Back     alignment and structure
>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* Back     alignment and structure
>2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A* Back     alignment and structure
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5 Back     alignment and structure
>1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A* Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Back     alignment and structure
>1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB: 1om0_A* 1te1_A* Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Back     alignment and structure
>3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} SCOP: c.1.8.0 PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A* Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A Back     alignment and structure
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A* Back     alignment and structure
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A* Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Back     alignment and structure
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* Back     alignment and structure
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A* Back     alignment and structure
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A* Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 282
d1goia2356 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic 1e-29
d1edqa2358 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt 3e-24
d1edqa2358 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt 0.002
d1ll7a1330 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus ( 7e-21
d1w9pa1333 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergil 8e-21
d1vf8a1302 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin 1e-20
d1vf8a1302 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin 4e-07
d2pi6a1292 c.1.8.5 (A:1-239,A:308-361) Signal processing prot 2e-19
d2pi6a1292 c.1.8.5 (A:1-239,A:308-361) Signal processing prot 5e-08
d1wb0a1297 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma 4e-19
d1wb0a1297 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma 5e-08
d1jnda1327 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth f 2e-17
d1kfwa1374 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitina 4e-17
d1itxa1347 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu 8e-16
d1itxa1347 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu 5e-08
d1nara_289 c.1.8.5 (A:) Seed storage protein {Vicia narbonens 2e-09
d1vf8a270 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mo 1e-07
d2ebna_285 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl 8e-06
d1itxa272 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circul 2e-05
d1wb0a268 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo 2e-05
d1edta_265 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {St 3e-05
d2pi6a268 d.26.3.1 (A:240-307) Signal processing protein (SP 3e-04
d1edqa373 d.26.3.1 (A:444-516) Chitinase A {Serratia marcesc 4e-04
d1eoka_282 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl 0.001
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 356 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase B, catalytic domain
species: Serratia marcescens [TaxId: 615]

 Score =  112 bits (281), Expect = 1e-29
 Identities = 51/289 (17%), Positives = 96/289 (33%), Gaps = 51/289 (17%)

Query: 1   TLKKENPSITILLSIG-----QGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGL 55
            LK  NPS+ I+ SIG       +  +++ Y + V   + R  F    +RI + YGF G+
Sbjct: 78  ALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGV 137

Query: 56  DFAWTAPNTSTDLFNIGLLFDEWRIAATKLEAKNSSRQQSQLILTARFHYSPPANSYLLN 115
           +  W     + ++        E R    +    +  +     +  A    +   + Y   
Sbjct: 138 NIDWE-YPQAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSK 196

Query: 116 SRQ--RNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSGGFARSTDQVLKAWIERGLPAD 173
             Q    L++++ +T     P     T   AAL+G ++G                  P  
Sbjct: 197 LAQIVAPLDYINLMTYDLAGPWE-KVTNHQAALFGDAAG------------------PTF 237

Query: 174 KLVMCLPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMYNS 233
              +     G++W  +        +     A               ++ +     V    
Sbjct: 238 YNALREANLGWSWEELTRAFPSPFSLTVDAA---------------VQQHLMMEGVPSAK 282

Query: 234 TYEVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHNW 282
                      +   FDD E+ + K  Y K+++L G   W +  D+ N 
Sbjct: 283 IV---------MGVPFDDAESFKYKAKYIKQQQLGGVMFWHLGQDNRNG 322
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358 Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358 Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Length = 330 Back     information, alignment and structure
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 333 Back     information, alignment and structure
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 Back     information, alignment and structure
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 Back     information, alignment and structure
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 Back     information, alignment and structure
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 Back     information, alignment and structure
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 Back     information, alignment and structure
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 327 Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374 Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Length = 289 Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 70 Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Length = 285 Back     information, alignment and structure
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 72 Back     information, alignment and structure
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 68 Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Length = 265 Back     information, alignment and structure
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 68 Back     information, alignment and structure
>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Length = 73 Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Length = 282 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
d1wb0a1297 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 100.0
d2pi6a1292 Signal processing protein (SPC-40, MGP-40) {Sheep 100.0
d1kfwa1374 Psychrophilic chitinase B {Arthrobacter sp., tad20 100.0
d1itxa1347 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 100.0
d1edqa2358 Chitinase A, catalytic domain {Serratia marcescens 100.0
d1jnda1327 Imaginal disc growth factor-2 {Fruit fly (Drosophi 100.0
d1w9pa1333 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 100.0
d1vf8a1302 Chitinase-like lectin ym1, saccharide binding doma 100.0
d1ll7a1330 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 100.0
d1goia2356 Chitinase B, catalytic domain {Serratia marcescens 100.0
d1nara_289 Seed storage protein {Vicia narbonensis, Narbonin 99.96
d2hvma_273 Hevamine A (chitinase/lysozyme) {Para rubber tree 99.93
d1cnva_283 Seed storage protein {Jack bean (Canavalia ensifor 99.9
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.88
d1ta3a_274 Xylanase inhibitor protein I, XIP-I {Wheat (Tritic 99.87
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 99.87
d1eoka_282 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.67
d1vf8a270 Chitinase-like lectin ym1 {Mouse (Mus musculus) [T 99.43
d1wb0a268 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 99.29
d2pi6a268 Signal processing protein (SPC-40, MGP-40) {Sheep 99.26
d1itxa272 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 99.14
d1edqa373 Chitinase A {Serratia marcescens [TaxId: 615]} 99.07
d1kfwa261 Psychrophilic chitinase B {Arthrobacter sp., tad20 98.8
d1jnda292 Imaginal disc growth factor-2 {Fruit fly (Drosophi 98.67
d1ll7a262 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 98.42
d1w9pa262 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 98.42
d1goia388 Chitinase B {Serratia marcescens [TaxId: 615]} 98.37
d2nt0a2354 Glucosylceramidase, catalytic domain {Human (Homo 87.41
d2aama1285 Hypothetical protein TM1410 {Thermotoga maritima [ 87.32
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitotriosidase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-49  Score=348.13  Aligned_cols=208  Identities=30%  Similarity=0.547  Sum_probs=188.1

Q ss_pred             CccccCCCCeEEEEEcCCCCCCCccchhhhCChHHHHHHHHHHHHHHHHcCCCeEEEEeecCCC----chhHhhHHHHHH
Q 042934            1 TLKKENPSITILLSIGQGMDTNYSIYSSMVSNSSHRKSFIDCSIRIARLYGFQGLDFAWTAPNT----STDLFNIGLLFD   76 (282)
Q Consensus         1 ~lk~~~~~~kvl~siGg~~~~~~~~~~~~~~~~~~r~~f~~~i~~~l~~~~~DGidid~e~~~~----~~~~~~~~~fl~   76 (282)
                      +||+++|++|||+|||||+. +++.|+.++++++.|++||++++++|++|+|||||||||+|..    +.++.+|+.|++
T Consensus        61 ~lk~~~p~lKvllSiGG~~~-~~~~fs~~~~~~~~R~~Fi~siv~~l~~y~fDGiDiDWE~p~~~~~~~~d~~n~~~l~~  139 (297)
T d1wb0a1          61 GLKKMNPKLKTLLAIGGWNF-GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQ  139 (297)
T ss_dssp             HGGGTCTTCEEEEEEECTTT-CSHHHHHHHTSHHHHHHHHHHHHHHHHHTTCCEEEEECSCTTSTTCCTTHHHHHHHHHH
T ss_pred             HHHHhCCCCeEEEEEecccc-ccchHHHHhhhhHHHHHHHHHHHHHHHHcCCCceeEEEEeccccCCChHHHHHHHHHHH
Confidence            37999999999999999986 6788999999999999999999999999999999999999964    468899999999


Q ss_pred             HHHHHHhhHHHhhccCCCccEEEEEEeccCCCC--CccChhhhhccccEEEeeeccccCCCCCCCCCCCCcccCCCCC--
Q 042934           77 EWRIAATKLEAKNSSRQQSQLILTARFHYSPPA--NSYLLNSRQRNLNWVHAVTASYYEPVSTNFTAPPAALYGSSSG--  152 (282)
Q Consensus        77 ~lr~~~l~~~~~~~g~~~~~~~ls~a~~~~~~~--~~~~~~~l~~~vD~v~vm~yd~~~~~~~~~~~~~spl~~~~~~--  152 (282)
                      +||. +|+...+..+  ++.+.+++++|+.+..  ..|+..++.+++|+|+||+||++++| ...+++++|||.....  
T Consensus       140 ~Lr~-~l~~~~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~i~~~vD~invmtYD~~g~~-~~~tg~~aply~~~~~~~  215 (297)
T d1wb0a1         140 DLAN-AFQQEAQTSG--KERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSW-EKVTGHNSPLYKRQEESG  215 (297)
T ss_dssp             HHHH-HHHHHHHHHC--SCCCEEEEEECCCHHHHHHHCCHHHHHHHCSEEEECCCCSSCTT-SSBCCCSSCSSCCTTCCG
T ss_pred             HHHH-HHhhhhhhcC--CCceeEEEEccCchhHhhhccCHHHHHhhCCEEEEEecccCCCC-CCCCCCCCcCCCCccccC
Confidence            9999 9998887777  6779999999877654  56899999999999999999999997 5668999999865442  


Q ss_pred             -CCcccHHHHHHHHHHCCCCCCceeeecccceeeeeecCCCCCCCCccccCCCCCCCCccchHHHHHhhhhCCCCeEEEE
Q 042934          153 -GFARSTDQVLKAWIERGLPADKLVMCLPFYGYAWRLVKPEDNGIGAAAAGPALHDSGLVTYKEINNHIKTYGPDVQVMY  231 (282)
Q Consensus       153 -~~~~~i~~~v~~~~~~g~p~~Kivlglp~yG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~~i~~~l~~~~~~~~~~~  231 (282)
                       ....+++.+|+.|++.|+|++||+||||                                                   
T Consensus       216 ~~~~~~~d~~v~~~~~~G~p~~KlvlGip---------------------------------------------------  244 (297)
T d1wb0a1         216 AAASLNVDAAVQQWLQKGTPASKLILGMP---------------------------------------------------  244 (297)
T ss_dssp             GGGGCSHHHHHHHHHHTTCCGGGEEEEEE---------------------------------------------------
T ss_pred             CCCCCCHHHHHHHHHHcCCCHHHeEEEec---------------------------------------------------
Confidence             1256899999999999999999999987                                                   


Q ss_pred             eCceeeEEEEeCCEEEEeCCHHHHHHHHHHHhhCCCceEEEEeecCCCCC
Q 042934          232 NSTYEVNYCSIEKIWFGFDDVEAVRMKVAYAKEKKLRGYFVWRVDYDDHN  281 (282)
Q Consensus       232 D~~~~~~y~~~~~~~i~ydd~~S~~~K~~~~~~~glgGv~~W~l~~Dd~~  281 (282)
                                       |||++|++.|++|++++||||||+|+|++||++
T Consensus       245 -----------------yd~~~si~~K~~~~~~~glgGv~~W~l~~DD~~  277 (297)
T d1wb0a1         245 -----------------TDDVESFKTKVSYLKQKGLGGAMVWALDLDDFA  277 (297)
T ss_dssp             -----------------SCCHHHHHHHHHHHHHTTCCEEEEECGGGSCTT
T ss_pred             -----------------cCCHHHHHHHHHHHHhcCCceEEEEeCccccCC
Confidence                             689999999999999999999999999999974
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Back     information, alignment and structure
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Back     information, alignment and structure
>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ll7a2 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1w9pa2 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1goia3 d.26.3.1 (A:292-379) Chitinase B {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure