Citrus Sinensis ID: 042945

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170--
Protein Sequence
MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVLPLSSCPLKLPSKRSSEKAACSGEVVATLMMESLVGDMMDIFM
Secondary Structure (PSIPRED)
ccccEEEEEEEEcccHHHHHHHHHHccccEEccccccccccEEEEcccEEEEEEEccccccccccccccccEEEEEEccHHHHHHHHHHcccEEEEEEEccccccEEEEEEEcccccEEEEEEccccccccccccccccccccccHHHcccHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHcccEEEEEEccHHHHHHHHHHHHccccccccccccccEEEEccccEEEEEEccccccccccccccccEEEEEEccHHHHHHHHHHccccEEEEEccccccEEEEEEEEcccccEEEEEccccccEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mpilslnhvsFVSKSVEKSVMFYEQVLGFVMikrpsfnfegaWLFNHGigihllesdkapekrgkinpkdnhisfqcsDMKLVMRKLEEMNIEYETavvdeggiqvdqlffhdpdgymieicncqnlpvlplsscplklpskrssekaaCSGEVVATLMMESLVGDMMDIFM
Flexible Loop (DISEMBL)
mpilslnhvsfvsKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEkrgkinpkdnhisfqcsdMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVLPLSSCPLKLPSKRSSEKAACSGEVVATLMMESLVGDMMDIFM
Low Complexity Region (SEG)
MPILSLNHvsfvsksveksvMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNlpvlplsscplklpskrssEKAACSGEVVATLMMESLVGDMMDIFM
Disordered region (IsUnstruct)
*****LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLE****************HISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVLPLSSCPL***************EVVATLMMESLV********
Disordered Region (DISOPRED)
MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVLPLSSCP******************VATLMMESLVGDMMDIFM
Disordered Region (DISEMBL)
MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVLPLSSCPLK************SGEVVATLMMESLVGDMMDIFM
Disordered Region (DISPRO)
*PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVLPLSSCPLKLPSKRSSEKAACSGEVVATLMMESLVGDMMDIFM
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVLPLSSCPLKLPSKRSSEKAACSGEVVATLMMESLVGDMMDIFM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	172	2.2.26 [Sep-21-2011]
Q81EF2	138	Metallothiol transferase	yes	no	0.610	0.760	0.302	6e-05
B7ITG3	138	Metallothiol transferase	yes	no	0.610	0.760	0.302	0.0001
B7HJF3	138	Metallothiol transferase	yes	no	0.593	0.739	0.285	0.0002
Q8CXK5	139	Metallothiol transferase	yes	no	0.622	0.769	0.290	0.0003
A9VRT9	138	Metallothiol transferase	no	no	0.593	0.739	0.301	0.0008
Q09751	302	Lactoylglutathione lyase	yes	no	0.691	0.394	0.273	0.0008
Q65KJ5	154	Metallothiol transferase	yes	no	0.627	0.701	0.285	0.0008

>sp|Q81EF2|FOSB_BACCR Metallothiol transferase FosB OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=fosB PE=3 SV=1

 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 24/129 (18%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVL-GFVMIKRPS---FNFEGAWLFNHGIGIHLLESDK 58
           +  +NH+ F   ++E S+MFYE+VL G +++K      FN  G W       I L E   
Sbjct: 2   LRGINHICFSVSNLENSIMFYEKVLEGELLVKGRKLAYFNICGVW-------IALNEETH 54

Query: 59  APEKRGKINPKDNHISF--QCSDMKLVMRKLEEMNIE----YETAVVDEGGIQVDQLFFH 112
            P  R +++    HI+F  +  D K ++++LEE ++      E  V D      + ++F 
Sbjct: 55  IP--RNEVHQSYTHIAFSVEQEDFKCLIQRLEENDVHILQGRERDVRD-----CESIYFV 107

Query: 113 DPDGYMIEI 121
           DPDG+  E 
Sbjct: 108 DPDGHKFEF 116

Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.
Bacillus cereus (strain ATCC 14579 / DSM 31) (taxid: 226900)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: -

>sp|B7ITG3|FOSB_BACC2 Metallothiol transferase FosB OS=Bacillus cereus (strain G9842) GN=fosB PE=3 SV=1

 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 24/129 (18%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVL-GFVMIKR---PSFNFEGAWLFNHGIGIHLLESDK 58
           +  +NH+ F   ++E S+MFYE+VL G +++K      FN  G W       I L E   
Sbjct: 2   LRGINHICFSVSNLENSIMFYEKVLEGELLVKGRKLAYFNICGVW-------IALNEETH 54

Query: 59  APEKRGKINPKDNHISF--QCSDMKLVMRKLEEMNIE----YETAVVDEGGIQVDQLFFH 112
            P  R +I+    HI+F  +  D + ++++LEE ++      E  V D      + ++F 
Sbjct: 55  IP--RNEIHQSYTHIAFSVEQEDFEYLIQRLEENDVHILKGRERDVRD-----CESIYFV 107

Query: 113 DPDGYMIEI 121
           DPDG+  E 
Sbjct: 108 DPDGHKFEF 116

Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.

Bacillus cereus (strain G9842) (taxid: 405531)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|B7HJF3|FOSB_BACC4 Metallothiol transferase FosB OS=Bacillus cereus (strain B4264) GN=fosB PE=3 SV=1

 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 24/126 (19%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVL-GFVMIKRPS---FNFEGAWLFNHGIGIHLLESDKAPE 61
           +NH+ F   ++E S+MFYE+VL G +++K      FN  G W         +  +++   
Sbjct: 5   INHICFSVSNLENSIMFYEKVLEGELLVKGRKLAYFNICGVW---------IALNEETHI 55

Query: 62  KRGKINPKDNHISF--QCSDMKLVMRKLEEMNIE----YETAVVDEGGIQVDQLFFHDPD 115
            R +I+    HI+F  +  D K ++++LEE ++      E  V D      + ++F DPD
Sbjct: 56  SRNEIHQSYTHIAFSVEQEDFKCLIQRLEENDVHILQGRERDVRD-----CESIYFVDPD 110

Query: 116 GYMIEI 121
           G+  E 
Sbjct: 111 GHKFEF 116

Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.

Bacillus cereus (strain B4264) (taxid: 405532)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|Q8CXK5|FOSB_OCEIH Metallothiol transferase FosB OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=fosB PE=3 SV=2

 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 24/131 (18%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVL-GFVMIKRPS---FNFEGAWLFNHGIGIHLLES 56
           M I  LNH+ F   ++E+S+ FY+QV    +++K  S   F+  G WL        L E 
Sbjct: 1   MNIKGLNHLLFSVSNLEQSIDFYQQVFDAKLLVKGRSTAYFDLNGIWLA-------LNEE 53

Query: 57  DKAPEKRGKINPKDNHISFQC--SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQ----LF 110
              P  R +IN    H +F    S+++  ++ L+ +N+      + EG  + +Q    ++
Sbjct: 54  KHIP--RNEINESYTHTAFSIDESELESAIQHLKALNVN-----ILEGRERAEQDKQSIY 106

Query: 111 FHDPDGYMIEI 121
           F DPDG+  E 
Sbjct: 107 FTDPDGHKFEF 117

Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.

Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) (taxid: 221109)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|A9VRT9|FOSB_BACWK Metallothiol transferase FosB OS=Bacillus weihenstephanensis (strain KBAB4) GN=fosB PE=3 SV=1

 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 24/126 (19%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVL-GFVMIKRPS---FNFEGAWLFNHGIGIHLLESDKAPE 61
           +NH+ F   ++E S+ FYE+VL G +++K      FN  G W       I L E    P 
Sbjct: 5   INHLCFSVSNLENSITFYEKVLEGELLVKGRKLAYFNICGVW-------IALNEETHIP- 56

Query: 62  KRGKINPKDNHISF--QCSDMKLVMRKLEEMNIE----YETAVVDEGGIQVDQLFFHDPD 115
            R +I+    H++F  +  D + ++ +LEE N+      E  V D      + ++F DPD
Sbjct: 57  -RKEIHQSYTHLAFSVEQKDFERLLHRLEENNVHILQGRERDVRD-----CESIYFVDPD 110

Query: 116 GYMIEI 121
           G+  E 
Sbjct: 111 GHKFEF 116

Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.

Bacillus weihenstephanensis (strain KBAB4) (taxid: 315730)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|Q09751|LGUL_SCHPO Lactoylglutathione lyase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=glo1 PE=1 SV=1

 Score = 43.1 bits (100), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 58/146 (39%), Gaps = 27/146 (18%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN----------FEGAWLFNHGI- 49
           M    LNH     K ++KS+ FY +V G  +I +  F           F+G    NHG+ 
Sbjct: 7   MSTYKLNHTMIRVKDLDKSLKFYTEVFGMKLIDQWVFEENEFSLSFLAFDGPGALNHGVE 66

Query: 50  -----GIHLLESDKAPEKR-------GKINPKD--NHISFQCSDMKLVMRKLEEMNIEYE 95
                GI  L  +   EK+       G   PK    HI F   +++     LE   + ++
Sbjct: 67  RSKREGILELTYNFGTEKKEGPVYINGNTEPKRGFGHICFTVDNIESACAYLESKGVSFK 126

Query: 96  TAVVDEGGIQVDQLFFHDPDGYMIEI 121
             + D  G      F  DPD Y IE+
Sbjct: 127 KKLSD--GKMKHIAFALDPDNYWIEL 150

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q65KJ5|FOSB_BACLD Metallothiol transferase FosB OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=fosB PE=3 SV=1

 Score = 43.1 bits (100), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 18/126 (14%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMI----KRPSFNFEGAWL-FNHGIGIHLLESD 57
           IL +NH+ F    +  S+ FYE+V     +    K   F+  G WL FN    I      
Sbjct: 6   ILGINHLLFSVSDLSVSISFYEKVFDAKWLVKAEKTAYFDLNGIWLAFNEEKDI------ 59

Query: 58  KAPEKRGKINPKDNHISF--QCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPD 115
               KR +I+    HI+F  Q  D+    +KL ++ +          G + D ++F DPD
Sbjct: 60  ----KRQEIHDSYTHIAFSIQQEDLPFWEKKLHDLGVNVLKGRKRHEGDR-DSIYFSDPD 114

Query: 116 GYMIEI 121
           G+  E+
Sbjct: 115 GHKFEL 120

Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.

Bacillus licheniformis (strain DSM 13 / ATCC 14580) (taxid: 279010)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	172
118484012	209	unknown [Populus trichocarpa]	0.976	0.803	0.717	1e-64
224129394	213	predicted protein [Populus trichocarpa]	0.970	0.784	0.693	5e-64
255571022	234	lactoylglutathione lyase, putative [Rici	0.982	0.722	0.616	5e-64
357445309	181	Metallothiol transferase fosB [Medicago	0.982	0.933	0.685	2e-63
351725479	181	uncharacterized protein LOC100305781 [Gl	0.988	0.939	0.686	3e-63
297739533	189	unnamed protein product [Vitis vinifera]	0.947	0.862	0.727	5e-63
225448138	202	PREDICTED: uncharacterized protein LOC10	0.947	0.806	0.727	5e-63
224120116	203	predicted protein [Populus trichocarpa]	0.779	0.660	0.844	6e-61
224133762	192	predicted protein [Populus trichocarpa]	0.976	0.875	0.625	2e-53
224097132	191	predicted protein [Populus trichocarpa]	0.976	0.879	0.612	3e-52

>gi|118484012|gb|ABK93893.1| unknown [Populus trichocarpa]

 Score =  250 bits (639), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 132/184 (71%), Positives = 147/184 (79%), Gaps = 16/184 (8%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEGAWLFNHGIGIHLLESDKA 59
           MP LSLNHVSFV KSV +SV FYE VLGFV+IKRPS F FEGAWLF++GIGIHLLESDKA
Sbjct: 26  MP-LSLNHVSFVCKSVPESVKFYEDVLGFVLIKRPSSFKFEGAWLFSYGIGIHLLESDKA 84

Query: 60  PEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMI 119
           P K+ KINPKDNHISFQCSDM LV++KLEE NIEY TAVV+EGGI VDQLFFHDPDGYM+
Sbjct: 85  PTKKSKINPKDNHISFQCSDMNLVIKKLEEKNIEYVTAVVEEGGITVDQLFFHDPDGYMV 144

Query: 120 EICNCQNLPVLPLSSCPL-KLPSK------------RSSEKAACSGEVVATLMMESLVGD 166
           EICNCQNLPVLPLSSCPL K P              + S +  C  E VA++MM++LV D
Sbjct: 145 EICNCQNLPVLPLSSCPLIKAPKPSASLASSPSLYGKQSWELRCFAE-VASVMMDNLVVD 203

Query: 167 MMDI 170
           MMDI
Sbjct: 204 MMDI 207

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129394|ref|XP_002328706.1| predicted protein [Populus trichocarpa] gi|118483150|gb|ABK93481.1| unknown [Populus trichocarpa] gi|222839004|gb|EEE77355.1| predicted protein [Populus trichocarpa]

 Score =  248 bits (634), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 127/183 (69%), Positives = 146/183 (79%), Gaps = 16/183 (8%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEGAWLFNHGIGIHLLESDKA 59
           MP L+LNH+SFV KSV +SV FY  VLGFV+IKRPS F FEGAWLFN+GIGIHLLESDKA
Sbjct: 30  MP-LALNHISFVCKSVAESVGFYYDVLGFVLIKRPSSFKFEGAWLFNYGIGIHLLESDKA 88

Query: 60  PEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMI 119
           P K+ KINPKDNHISFQCSDM LV++KLEE NIEY TAVV+EGGI VDQLFFHDPDG+M+
Sbjct: 89  PAKKSKINPKDNHISFQCSDMNLVIKKLEEKNIEYVTAVVEEGGITVDQLFFHDPDGHMV 148

Query: 120 EICNCQNLPVLPLSSCPLKLPSK-------------RSSEKAACSGEVVATLMMESLVGD 166
           EICNCQNLPVLPLS+CP+KLP               + S +  C  E VA+LMM++LV +
Sbjct: 149 EICNCQNLPVLPLSACPIKLPKTNGKLASSVPSLCGKQSWELQCFAE-VASLMMDNLVVN 207

Query: 167 MMD 169
           MMD
Sbjct: 208 MMD 210

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571022|ref|XP_002526462.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223534242|gb|EEF35957.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  248 bits (633), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 130/211 (61%), Positives = 147/211 (69%), Gaps = 42/211 (19%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEGAWLFNHGIGIHLLESDKA 59
           MP+LSLNHVSFV KSV +SV FYE VLGFV+I+RPS FNFEGAWLFN+GIGIHLLE++  
Sbjct: 23  MPLLSLNHVSFVCKSVAESVRFYEDVLGFVLIQRPSSFNFEGAWLFNYGIGIHLLEAEDV 82

Query: 60  PEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMI 119
           P K+G INPKDNHISFQ SDM LV+R LEE NIEY TAVV+EGGI VDQLFFHDPDGYM+
Sbjct: 83  PHKKGPINPKDNHISFQTSDMDLVVRNLEEKNIEYVTAVVEEGGITVDQLFFHDPDGYMV 142

Query: 120 EICNCQNLPVLPLSSCPLK----------------------------------------L 139
           EICNCQNLPVLPLS+CPLK                                        L
Sbjct: 143 EICNCQNLPVLPLSACPLKLPKAANGNLTPPPLYGNLPSLTLHSVSKNVYLKDAHALLQL 202

Query: 140 PSKRSSEKAACSGEVVATLMMESLVGDMMDI 170
           PS   S + ACSG  VA+LMM++ V +MMDI
Sbjct: 203 PSGNRSWEMACSGG-VASLMMDNFVANMMDI 232

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445309|ref|XP_003592932.1| Metallothiol transferase fosB [Medicago truncatula] gi|355481980|gb|AES63183.1| Metallothiol transferase fosB [Medicago truncatula]

 Score =  246 bits (629), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 122/178 (68%), Positives = 148/178 (83%), Gaps = 9/178 (5%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEGAWLFNHGIGIHLLE--SD 57
           +P+LSLNHVSFV +S+++SV FYE VLGFV+IKRPS F F+GAWLFN+GIGIHLLE  SD
Sbjct: 3   LPLLSLNHVSFVCRSLQESVKFYENVLGFVLIKRPSSFKFQGAWLFNYGIGIHLLETESD 62

Query: 58  KAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGY 117
           K P KRG+IN K+NHISFQCSDMKL+M+ L+EMNIEY+TAVV++GGI+VDQLFFHDPDGY
Sbjct: 63  KVPVKRGEINTKENHISFQCSDMKLIMKNLDEMNIEYKTAVVEDGGIKVDQLFFHDPDGY 122

Query: 118 MIEICNCQNLPVLPLSSCPLKLPSKRS-----SEKAACSGEVVATLMMESLVGDMMDI 170
           MIE+CNCQNLPVLP+S+CPLK P+ ++      E   C  E  A LMME LV D++ I
Sbjct: 123 MIEMCNCQNLPVLPISTCPLKQPTNQAPVPFYGEGKNCHAE-EALLMMEILVIDLLRI 179

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725479|ref|NP_001236582.1| uncharacterized protein LOC100305781 [Glycine max] gi|255626591|gb|ACU13640.1| unknown [Glycine max]

 Score =  246 bits (627), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 118/172 (68%), Positives = 145/172 (84%), Gaps = 2/172 (1%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEGAWLFNHGIGIHLLESDKA 59
           +P+LSLNHVSFV KSV +SV FYE VLGF++IKRPS F FEGAWLFN+GIGIHLLES+K 
Sbjct: 8   LPLLSLNHVSFVCKSVSESVKFYEDVLGFLLIKRPSSFKFEGAWLFNYGIGIHLLESEKV 67

Query: 60  PEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMI 119
           P ++ +INPK+NHISFQCSDMK++M+KL+ M IEY TAVV+EGG++VDQLFFHDPDGYMI
Sbjct: 68  PVRKREINPKENHISFQCSDMKVIMQKLDAMKIEYVTAVVEEGGVKVDQLFFHDPDGYMI 127

Query: 120 EICNCQNLPVLPLSSCPLKLPSKRSSEKAAC-SGEVVATLMMESLVGDMMDI 170
           EICNCQNLPVLP+SSCPLK     ++ K  C + E ++ LMM++ V DM+ I
Sbjct: 128 EICNCQNLPVLPISSCPLKQLGGEATFKINCFAEESMSMLMMDNFVMDMLKI 179

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739533|emb|CBI29715.3| unnamed protein product [Vitis vinifera]

 Score =  245 bits (625), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 123/169 (72%), Positives = 143/169 (84%), Gaps = 6/169 (3%)

Query: 7   NHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEGAWLFNHGIGIHLLESDKAPEKRGK 65
           NHVSFV KSV KSV FYE+VLGFV+IKRPS F+FEGAWLFN+GIGIHLLES++ P K+G 
Sbjct: 20  NHVSFVCKSVPKSVKFYEEVLGFVLIKRPSSFDFEGAWLFNYGIGIHLLESEEVPAKKGA 79

Query: 66  INPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ 125
           INPKDNHISFQ SDM LV++KL EM IEY TAVV EGG++VDQLFFHDPDGYM+EICNCQ
Sbjct: 80  INPKDNHISFQSSDMGLVVKKLGEMKIEYVTAVVKEGGVKVDQLFFHDPDGYMVEICNCQ 139

Query: 126 NLPVLPLSSCPL--KLP--SKRSSEKAACSGEVVATLMMESLVGDMMDI 170
           NLPVLPLSSCP+  KLP  +++  ++  C GE+ A  MME+LV DMMDI
Sbjct: 140 NLPVLPLSSCPITNKLPKGNRKYGKRQQCGGEMEAQ-MMENLVVDMMDI 187

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448138|ref|XP_002263444.1| PREDICTED: uncharacterized protein LOC100266411 [Vitis vinifera]

 Score =  245 bits (625), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 123/169 (72%), Positives = 143/169 (84%), Gaps = 6/169 (3%)

Query: 7   NHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEGAWLFNHGIGIHLLESDKAPEKRGK 65
           NHVSFV KSV KSV FYE+VLGFV+IKRPS F+FEGAWLFN+GIGIHLLES++ P K+G 
Sbjct: 33  NHVSFVCKSVPKSVKFYEEVLGFVLIKRPSSFDFEGAWLFNYGIGIHLLESEEVPAKKGA 92

Query: 66  INPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ 125
           INPKDNHISFQ SDM LV++KL EM IEY TAVV EGG++VDQLFFHDPDGYM+EICNCQ
Sbjct: 93  INPKDNHISFQSSDMGLVVKKLGEMKIEYVTAVVKEGGVKVDQLFFHDPDGYMVEICNCQ 152

Query: 126 NLPVLPLSSCPL--KLP--SKRSSEKAACSGEVVATLMMESLVGDMMDI 170
           NLPVLPLSSCP+  KLP  +++  ++  C GE+ A  MME+LV DMMDI
Sbjct: 153 NLPVLPLSSCPITNKLPKGNRKYGKRQQCGGEMEAQ-MMENLVVDMMDI 200

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120116|ref|XP_002331140.1| predicted protein [Populus trichocarpa] gi|222872868|gb|EEF09999.1| predicted protein [Populus trichocarpa]

 Score =  238 bits (607), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 114/135 (84%), Positives = 123/135 (91%), Gaps = 1/135 (0%)

Query: 4   LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEGAWLFNHGIGIHLLESDKAPEK 62
           LSLNHVSFV KSV +SV FYE VLGFV+IKRPS F FEGAWLF++GIGIHLLESDKAP K
Sbjct: 3   LSLNHVSFVCKSVPESVKFYEDVLGFVLIKRPSSFKFEGAWLFSYGIGIHLLESDKAPTK 62

Query: 63  RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC 122
           + KINPKDNHISFQCSDM LV++KLEE NIEY TAVV+EGGI VDQLFFHDPDGYM+EIC
Sbjct: 63  KSKINPKDNHISFQCSDMNLVIKKLEEKNIEYVTAVVEEGGITVDQLFFHDPDGYMVEIC 122

Query: 123 NCQNLPVLPLSSCPL 137
           NCQNLPVLPLSSCPL
Sbjct: 123 NCQNLPVLPLSSCPL 137

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133762|ref|XP_002327674.1| predicted protein [Populus trichocarpa] gi|222836759|gb|EEE75152.1| predicted protein [Populus trichocarpa]

 Score =  213 bits (542), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/179 (62%), Positives = 136/179 (75%), Gaps = 11/179 (6%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEGAWLFNHGIGIHLLES--- 56
           +P+LSLNHVS + +SV  SV FYE VLGFV+IKRPS FNF GAWL+N+GIGIHL+E+   
Sbjct: 14  LPLLSLNHVSLLCRSVWASVRFYEDVLGFVLIKRPSSFNFNGAWLYNYGIGIHLIENPSI 73

Query: 57  ----DKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFH 112
               D   E R  INPKDNH+SFQC+D+ LV R+L+EM + Y TAVV+E GI VDQ+FFH
Sbjct: 74  DHEFDTIVEPR-PINPKDNHMSFQCTDVGLVKRRLQEMGMRYVTAVVEEDGIMVDQVFFH 132

Query: 113 DPDGYMIEICNCQNLPVLPLSSCPLKLPSKRSSEKAACSG-EVVATLMMESLVGDMMDI 170
           DPDGYM+EICNC N+P+LPLSSCPLK P   S +KAA S    +  +MMESL  DMM+I
Sbjct: 133 DPDGYMVEICNCDNIPILPLSSCPLK-PRMGSFKKAAPSNCGFMEKVMMESLSMDMMNI 190

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097132|ref|XP_002310845.1| predicted protein [Populus trichocarpa] gi|222853748|gb|EEE91295.1| predicted protein [Populus trichocarpa]

 Score =  209 bits (532), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 109/178 (61%), Positives = 133/178 (74%), Gaps = 10/178 (5%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEGAWLFNHGIGIHLLES--- 56
           +P+LSLNHVS + +SV  S  FYE VLGFV IKRPS FNF GAWL+N+GIGIHL+E+   
Sbjct: 14  LPLLSLNHVSLLCRSVWASARFYEHVLGFVHIKRPSSFNFNGAWLYNYGIGIHLIENPSI 73

Query: 57  ---DKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHD 113
              D   E R  INPKDNH+SFQC+D+ LV RKL+EM + Y TAVV+E GI+VDQ+FFHD
Sbjct: 74  DEFDSIVEPR-PINPKDNHMSFQCTDVGLVKRKLQEMGMRYVTAVVEEDGIKVDQVFFHD 132

Query: 114 PDGYMIEICNCQNLPVLPLSSCPLKLPSKRSSEKAA-CSGEVVATLMMESLVGDMMDI 170
           PDGYM+EICNC N+P+LPLSSCP K P   S +KA   +   +  +MMESL  DMM+I
Sbjct: 133 PDGYMVEICNCDNIPILPLSSCPFK-PRTGSFKKATPINCGFMENVMMESLSMDMMNI 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	172
TAIR|locus:2037728	174	GLYI4 "AT1G15380" [Arabidopsis	0.715	0.706	0.625	1.6e-38
TAIR|locus:2016254	167	GLYI7 "AT1G80160" [Arabidopsis	0.715	0.736	0.625	4.3e-38
TAIR|locus:2057522	184	GLYI8 "AT2G28420" [Arabidopsis	0.726	0.679	0.492	3.7e-32
UNIPROTKB|Q4KB97	136	PFL_3381 "Uncharacterized prot	0.529	0.669	0.297	1.4e-07
UNIPROTKB|Q8EFL3	153	SO_1958 "Glyoxylase-like domai	0.691	0.777	0.279	1.8e-07
TIGR_CMR|SO_1958	153	SO_1958 "conserved hypothetica	0.691	0.777	0.279	1.8e-07
TAIR|locus:2045482	135	AT2G32090 "AT2G32090" [Arabido	0.680	0.866	0.278	7.8e-07
UNIPROTKB|Q5BL69	184	glo1 "Glyoxalase 1" [Xenopus (	0.476	0.445	0.288	4e-05
UNIPROTKB|Q484K5	146	CPS_1779 "Putative uncharacter	0.651	0.767	0.226	4.7e-05
TIGR_CMR|CPS_1779	146	CPS_1779 "conserved hypothetic	0.651	0.767	0.226	4.7e-05

TAIR|locus:2037728 GLYI4 "AT1G15380" [Arabidopsis thaliana (taxid:3702)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 80/128 (62%), Positives = 94/128 (73%)

Query:     3 ILSLNHXXXXXXXXXXXXMFYEQVLGFVMIKRP-SFNFEGAWLFNHGIGIHLL---ESDK 58
             + SLNH             FY++VLGF+ I+RP S NFEGAWLF HGIGIHLL   E +K
Sbjct:    11 LTSLNHVSVLCRSVDESMNFYQKVLGFIPIRRPESLNFEGAWLFGHGIGIHLLCAPEPEK 70

Query:    59 APEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYM 118
              P+K   INPKDNHISFQC  M +V +KLEEM I+Y  A+V+EGGIQVDQLFFHDPDG+M
Sbjct:    71 LPKKTA-INPKDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVDQLFFHDPDGFM 129

Query:   119 IEICNCQN 126
             IEICNC +
Sbjct:   130 IEICNCDS 137

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2016254 GLYI7 "AT1G80160" [Arabidopsis thaliana (taxid:3702)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 80/128 (62%), Positives = 95/128 (74%)

Query:     3 ILSLNHXXXXXXXXXXXXMFYEQVLGFVMIKRP-SFNFEGAWLFNHGIGIHLLESDKAPE 61
             I SLNH             FY+ VLGF+ I+RP SF+F+GAWLF HGIGIHLL+S + PE
Sbjct:    11 IKSLNHISLLCRSVEESISFYQNVLGFLPIRRPDSFDFDGAWLFGHGIGIHLLQSPE-PE 69

Query:    62 K---RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYM 118
             K   + +INPKDNHISFQC  M+ V +KL+EM IEY  AVV+EGGIQVDQLFFHDPD +M
Sbjct:    70 KLLKKTEINPKDNHISFQCESMEAVEKKLKEMEIEYVRAVVEEGGIQVDQLFFHDPDAFM 129

Query:   119 IEICNCQN 126
             IEICNC +
Sbjct:   130 IEICNCDS 137

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2057522 GLYI8 "AT2G28420" [Arabidopsis thaliana (taxid:3702)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 64/130 (49%), Positives = 92/130 (70%)

Query:     2 PILSLNHXXXXXXXXXXXXMFYEQVLGFVMIKRP-SFNFEGAWLFNHGIGIHLLES---D 57
             P+++LNH             FY +VLGFV I+RP SF+F+GAWLFN+G+GIHL+++   D
Sbjct:    17 PLMALNHVSRLCKDVKKSLEFYTKVLGFVEIERPASFDFDGAWLFNYGVGIHLVQAKDQD 76

Query:    58 KAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEY-ETAVVDEGGIQVDQLFFHDPDG 116
             K P     ++P DNHISFQC DM+ + ++L+E+ ++Y +  V DE    +DQLFF+DPDG
Sbjct:    77 KLPSDTDHLDPMDNHISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPDG 136

Query:   117 YMIEICNCQN 126
             +M+EICNC+N
Sbjct:   137 FMVEICNCEN 146

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009845 "seed germination" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

UNIPROTKB|Q4KB97 PFL_3381 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 30/101 (29%), Positives = 52/101 (51%)

Query:    23 YEQVLGFVMIKRPSFNFEGAWLFNHGIG-IHLLESDKAPEKRGKINPKDNHISFQCSDM- 80
             +  +LG    +RP F F G WL+      +H++E    PE      P  +HI+F   +  
Sbjct:    22 FADLLGLQTGRRPPFPFPGRWLYQGDAALVHVIEQAHCPE------PHLSHIAFSTQEAA 75

Query:    81 KLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
             + V+R+++   +E++ A V E GI   Q+F   P G ++E+
Sbjct:    76 EAVLRRVQASGLEHQVAQVPEDGIW--QIFVRLPGGLVLEL 114

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8EFL3 SO_1958 "Glyoxylase-like domain protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 36/129 (27%), Positives = 60/129 (46%)

Query:     1 MPILSLNHXXXXXXXXXXXXMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGI-HLLE-SDK 58
             M I+ L+H             FY+ +LG     RP F F G WL+     I HL+E   +
Sbjct:     1 MNIVGLDHFTIRTPILAETVQFYQVILGLTQGWRPRFGFPGHWLYAEEKPILHLVEVGSR 60

Query:    59 APEKR-GKINP-----KDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFH 112
             A +   G+ N      + +H+SF+ +++  + + L     ++   +V E G    QLF  
Sbjct:    61 ALDAYLGESNALFGSGRVDHLSFRGTNLAQMQQHLCRQQCQFRERIVPEIGEH--QLFIE 118

Query:   113 DPDGYMIEI 121
             DP+G  +E+
Sbjct:   119 DPNGITVEM 127

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SO_1958 SO_1958 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 36/129 (27%), Positives = 60/129 (46%)

Query:     1 MPILSLNHXXXXXXXXXXXXMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGI-HLLE-SDK 58
             M I+ L+H             FY+ +LG     RP F F G WL+     I HL+E   +
Sbjct:     1 MNIVGLDHFTIRTPILAETVQFYQVILGLTQGWRPRFGFPGHWLYAEEKPILHLVEVGSR 60

Query:    59 APEKR-GKINP-----KDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFH 112
             A +   G+ N      + +H+SF+ +++  + + L     ++   +V E G    QLF  
Sbjct:    61 ALDAYLGESNALFGSGRVDHLSFRGTNLAQMQQHLCRQQCQFRERIVPEIGEH--QLFIE 118

Query:   113 DPDGYMIEI 121
             DP+G  +E+
Sbjct:   119 DPNGITVEM 127

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2045482 AT2G32090 "AT2G32090" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
 Identities = 37/133 (27%), Positives = 57/133 (42%)

Query:     5 SLNHXXXXXXXXXXXXMFYEQVLGFVMIKRPSF-NFEGAWLFNHG-IGIHLLE---SDKA 59
             SL H             FY++V GF  I+ P F + +  WL   G   +H+++   S   
Sbjct:     3 SLGHIARESSDITRLAQFYKEVFGFEEIESPDFGDLQVVWLNLPGAFAMHIIQRNPSTNL 62

Query:    60 PE---------KRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLF 110
             PE         K     P  +HI F   +    +  L+E  IE     + +G  +V Q+F
Sbjct:    63 PEGPYSATSAVKDPSHLPMGHHICFSVPNFDSFLHSLKEKGIETFQKSLPDG--KVKQVF 120

Query:   111 FHDPDGYMIEICN 123
             F DPDG  +E+ +
Sbjct:   121 FFDPDGNGLEVAS 133

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

UNIPROTKB|Q5BL69 glo1 "Glyoxalase 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 95 (38.5 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
 Identities = 26/90 (28%), Positives = 41/90 (45%)

Query:    38 NFEGAWLFNHGIGIHLL-----ESDKAPEKRGKINPKD-NHISFQCSDMKLVMRKLEEMN 91
             N   AW F+    + L      E+D+ P   G  +P+   HI     D+    ++ EE+ 
Sbjct:    87 NERTAWTFSRKATLELTHNWGTENDEKPYHNGNSDPRGFGHIGLAVPDVYAACKRFEELG 146

Query:    92 IEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
             + +     D+G ++    F  DPDGY IEI
Sbjct:   147 VTF-VKKPDDGKMK-GLAFIQDPDGYWIEI 174

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

UNIPROTKB|Q484K5 CPS_1779 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 99 (39.9 bits), Expect = 4.7e-05, P = 4.7e-05
 Identities = 27/119 (22%), Positives = 51/119 (42%)

Query:     4 LSLNHXXXXXXXXXXXXMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG-IHLLESDKAPEK 62
             +++NH             F+  ++G    KRP F F G WL++     IH+ E   +   
Sbjct:     1 MNINHVLVLTTDLRAMECFWVDLIGLHEGKRPPFPFNGLWLYSDDNPLIHIAEQPSSAFG 60

Query:    63 RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
              G I     H++ + ++   ++++L+     Y    +     +  QLF   PDG  +E+
Sbjct:    61 NGSIA----HVALEGANYNALLKRLDNSAYSYTEKALPISNER--QLFIIGPDGLTVEM 113

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_1779 CPS_1779 "conserved hypothetical protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 99 (39.9 bits), Expect = 4.7e-05, P = 4.7e-05
 Identities = 27/119 (22%), Positives = 51/119 (42%)

Query:     4 LSLNHXXXXXXXXXXXXMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG-IHLLESDKAPEK 62
             +++NH             F+  ++G    KRP F F G WL++     IH+ E   +   
Sbjct:     1 MNINHVLVLTTDLRAMECFWVDLIGLHEGKRPPFPFNGLWLYSDDNPLIHIAEQPSSAFG 60

Query:    63 RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
              G I     H++ + ++   ++++L+     Y    +     +  QLF   PDG  +E+
Sbjct:    61 NGSIA----HVALEGANYNALLKRLDNSAYSYTEKALPISNER--QLFIIGPDGLTVEM 113

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.13.11.39	LOW CONFIDENCE prediction!
3rd Layer	4.4.1	LOW CONFIDENCE prediction!
4th Layer	4.4.1.5	LOW CONFIDENCE prediction!
3rd Layer	2.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00860021 SubName- Full=Putative uncharacterized protein; (214 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	172
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	4e-38
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	7e-18
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	5e-13
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	3e-12
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	7e-11
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	9e-11
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	5e-09
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	1e-07
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	2e-07
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	4e-07
PRK04101	139	PRK04101, PRK04101, fosfomycin resistance protein	1e-06
cd08360	134	cd08360, MhqB_like_C, C-terminal domain of Burkhol	2e-06
cd08348	134	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2	2e-06
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	3e-06
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	8e-06
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	1e-05
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	1e-05
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	1e-05
cd08349	112	cd08349, BLMA_like, Bleomycin binding protein (BLM	6e-05
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	3e-04
cd08363	131	cd08363, FosB, FosB, a fosfomycin resistance prote	5e-04
cd07254	120	cd07254, Glo_EDI_BRP_like_20, This conserved domai	6e-04
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	0.001
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	0.002
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	0.002
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	0.003
cd08351	123	cd08351, ChaP_like, ChaP, an enzyme involved in th	0.004

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  126 bits (318), Expect = 4e-38
 Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 4/117 (3%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG-IHLLESDKAPEKRG 64
           L+HV+     +E S  FY  VLG     RP F F GAWL+      +HL+E D  P+   
Sbjct: 1   LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFPGAWLYAGDGPQLHLIEED-PPDALP 59

Query: 65  KINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
           +   +D+HI+F+  D+     +L+   + Y  + V   G  V QLF  DPDG  IE+
Sbjct: 60  EGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDG--VRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 74.4 bits (183), Expect = 7e-18
 Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 4/114 (3%)

Query: 8   HVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKIN 67
           HV      +E +V FYE VLGF +++R     E A+L   G  + L E D+     G   
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAEFAFLRLGGTRLELFEGDEPAPPSG--- 57

Query: 68  PKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
               H++F+  D+   + +L+   +E      +E        +F DPDG +IE+
Sbjct: 58  GGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGG-RVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 61.7 bits (150), Expect = 5e-13
 Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 7/114 (6%)

Query: 11  FVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKD 70
                +E +  FYE++LGF               F  G+ + L    +         P  
Sbjct: 1   LPVSDLEAARAFYEELLGF----EVEEEDGEYAEFRLGLVLALGGFIELIGLPEPDAPGG 56

Query: 71  N--HISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC 122
              H+ F+  D+  ++ +L+           D       + +  DPDG +IE+ 
Sbjct: 57  GGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPW-GGREFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 59.9 bits (146), Expect = 3e-12
 Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG---------IHLLES 56
           L+HV+ V++  +++V FY  VLG  ++K+ + N +    ++   G         +   E 
Sbjct: 2   LHHVTLVTRDAQETVDFYTDVLGLRLVKK-TVNQDDPGTYHLFFGDGLGSPGTLLTFFEW 60

Query: 57  DKAPEKRGKINPKDNHISFQC-SDMKLV--MRKLEEMNIEYETAVVDEGGIQVDQLFFHD 113
             A  K  +   + +HI+F   S+  L     +L    +     VVD  G +   L+F D
Sbjct: 61  PDAGPKGRRGPGQIHHIAFSVPSEASLEAWRERLRAAGVPVSG-VVDRFGERS--LYFED 117

Query: 114 PDGYMIEIC 122
           PDG  +E+ 
Sbjct: 118 PDGIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 56.7 bits (136), Expect = 7e-11
 Identities = 27/135 (20%), Positives = 46/135 (34%), Gaps = 18/135 (13%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKR----PSFNFEGAWLFNHGIGIHLLESDKAPE 61
           ++HV+     +E S+ FY  VLG  ++K              LF  G G           
Sbjct: 3   IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGF 62

Query: 62  KRGKINP--------------KDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVD 107
           +                       H++F+  D       L  ++ +     + E G    
Sbjct: 63  EGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV 122

Query: 108 QLFFHDPDGYMIEIC 122
            ++F DPDG +IE+ 
Sbjct: 123 HVYFRDPDGILIELA 137

Length = 138

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 55.9 bits (135), Expect = 9e-11
 Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 15/125 (12%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKR---PSFNFEGAWLFNHGIGIHLLESDKAPEK 62
           ++HV+     +EKS+ FY  VLGF +++           A+    G  + LL        
Sbjct: 2   IDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELL--LNETPP 59

Query: 63  RGKINPKDNHISFQCSDM----KLVMRKLEEMNIEYETAVVDEGGIQVDQLFFH--DPDG 116
                   +HI+F    +         +L+   +E        G       + +  DPDG
Sbjct: 60  PAAAGFGGHHIAFIAFSVDDVDAAY-DRLKAAGVEIVREPGRHGW---GGRYSYFRDPDG 115

Query: 117 YMIEI 121
            +IE+
Sbjct: 116 NLIEL 120

Length = 120

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 51.5 bits (124), Expect = 5e-09
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 14/129 (10%)

Query: 5   SLNHVSFVSKSVEKSVMFYEQVL---GFVMIKRPSFNFEGAWLFNHG---IGIHLLESDK 58
            ++HV    + +E+S  FY+ +L   GF  +K        +W    G   + +   + + 
Sbjct: 1   GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGR--SWRAGDGGTYLVLQQADGES 58

Query: 59  APEKRGKINPKDNHISFQCSDMKLV---MRKLEE--MNIEYETAVVDEGGIQVDQLFFHD 113
           A     + NP  +H++F+    + V     +L +    I Y       GG     LFF D
Sbjct: 59  AGRHD-RRNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFED 117

Query: 114 PDGYMIEIC 122
           PDG  +E+ 
Sbjct: 118 PDGIRLELV 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 14/129 (10%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIK---RPSFNFEGAWLFNHGI-GIHLLE--S 56
           +  ++HV+ +     +S  FY +VLG  +I+   RP      ++  +  + G + +E  S
Sbjct: 1   LKGIHHVAIICSDYARSKEFYVEVLGLTLIRETYRPE---RKSYKLDLALNGEYQIELFS 57

Query: 57  DKAPEKRGKINPKD--NHISFQCSDMKLVMRKLEEMNIEYETAVVDE-GGIQVDQLFFHD 113
              P  R          H++F   D++  + +L+   +E E   VDE  G +    FF+D
Sbjct: 58  FPNPPPRPSYPEACGLRHLAFAVEDIEAAVAELKAHGVEVEPIRVDEFTGKRF--TFFYD 115

Query: 114 PDGYMIEIC 122
           PDG  +E+ 
Sbjct: 116 PDGLPLELY 124

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 10/123 (8%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKR---PSFNFEGAWL-FNHGIGIHLLESDKAPE 61
             H     K +EKS+ FY  VLG  +++R   P   F   +L +       +LE      
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 62  KRGKINPKDN--HISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFF-HDPDGYM 118
                +  +   H++F   D+     +LEEM +E  T    +GG  +  + F  DPDGY 
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEV-TKPPGDGG--MKGIAFIKDPDGYW 117

Query: 119 IEI 121
           IE+
Sbjct: 118 IEL 120

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 46.0 bits (109), Expect = 4e-07
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 16/119 (13%)

Query: 8   HVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKIN 67
           H++ + K + KS+ FY  +LG  +I   S   + A+    G+ I L+E D          
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSS---KEAYFELAGLWICLMEEDSLQ----GPE 53

Query: 68  PKDNHISF--QCSDMKLVMRKLEEMNIEY---ETAVVDEGGIQVDQLFFHDPDGYMIEI 121
               HI+F  Q  +      +L+ + +E       V  EG      ++F+DPDG+++E+
Sbjct: 54  RTYTHIAFQIQSEEFDEYTERLKALGVEMKPERPRVQGEG----RSIYFYDPDGHLLEL 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|179740 PRK04101, PRK04101, fosfomycin resistance protein FosB; Provisional

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 26/129 (20%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMI----KRPSFNFEGAWL-FNHGIGIHLLESD 57
           +  +NH+ F   ++EKS+ FYE+VLG  ++    K   F+  G W+  N    I      
Sbjct: 2   LKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGRKTAYFDLNGLWIALNEEKDI------ 55

Query: 58  KAPEKRGKINPKDNHISF--QCSDMKLVMRKLEEMNIEY----ETAVVDEGGIQVDQLFF 111
                R +I+    HI+F  +  D     ++L+E ++      E    D+  I     +F
Sbjct: 56  ----PRNEIHQSYTHIAFSIEEEDFDHWYQRLKENDVNILPGRERDERDKKSI-----YF 106

Query: 112 HDPDGYMIE 120
            DPDG+  E
Sbjct: 107 TDPDGHKFE 115

Length = 139

>gnl|CDD|176708 cd08360, MhqB_like_C, C-terminal domain of Burkholderia sp

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 25/85 (29%), Positives = 31/85 (36%), Gaps = 11/85 (12%)

Query: 4  LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGI---HLLESDKAP 60
            L HV      VE +  FY   LGF    R S  F+G   F    G    H L   K P
Sbjct: 2  RRLGHVVLFVPDVEAAEAFYRDRLGF----RVSDRFKGRGAFLRAAGGGDHHNLFLIKTP 57

Query: 61 EKRGKINPKDNHISFQCSDMKLVMR 85
                    +H +F+  D+  VM 
Sbjct: 58 APMAGF----HHAAFEVGDIDEVML 78

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Length = 134

>gnl|CDD|176696 cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 20/128 (15%)

Query: 5   SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF-------NHGIGIHLLESD 57
            L+HV    + +E  V FY  VLGF +  R      G  +F       +H I   L+   
Sbjct: 1   RLSHVVLYVRDLEAMVRFYRDVLGFTVTDR---GPLGGLVFLSRDPDEHHQIA--LITGR 55

Query: 58  KAPEKRGKINPKDNHISFQCSDM---KLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDP 114
            A    G      NHI+F+   +   + +  +L    I     V       +   +F DP
Sbjct: 56  PAAPPPGPAGL--NHIAFEVDSLDDLRDLYERLRAAGITPVWPVDHGNAWSI---YFRDP 110

Query: 115 DGYMIEIC 122
           DG  +E+ 
Sbjct: 111 DGNRLELF 118

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, which form hexamers. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, its two domains do not belong to this subfamily. Length = 134

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 16/120 (13%)

Query: 5   SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHL-LESDKAPEKR 63
            +NH++     +E+SV FY  +LGF   K      +GA+L    + + L ++++  P   
Sbjct: 1   GINHITLAVSDLERSVAFYVDLLGF---KLHVRWDKGAYLEAGDLWLCLSVDANVGPA-- 55

Query: 64  GKINPKDNHISFQCS--DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
                   H +F  S  D   +  KL +  ++       EG    D  +F DPDG+ +E+
Sbjct: 56  ----KDYTHYAFSVSEEDFASLKEKLRQAGVKEWKENTSEG----DSFYFLDPDGHKLEL 107

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.6 bits (101), Expect = 8e-06
 Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 17/131 (12%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFV------MIKRPSFNFEGAWLFN-HGIGIHLLE 55
           I  ++HV      +E ++ FY +VLG         + R +  F G+   N H +G    E
Sbjct: 1   IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVGRKALRF-GSQKINLHPVG---GE 56

Query: 56  SDKAPEKRGKINPKDNHISFQCS-DMKLVMRKLEEMNIEYETAVVDEGGIQ--VDQLFFH 112
            + A    G   P  + +       +  ++  LE   +  E   V   G +  +  ++F 
Sbjct: 57  FEPAAGSPG---PGSDDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFR 113

Query: 113 DPDGYMIEICN 123
           DPDG +IE+ N
Sbjct: 114 DPDGNLIELSN 124

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 9/113 (7%)

Query: 17  EKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDN----H 72
           E +  FYE VLG  ++ +        W+   G+ + L +        G+I P       H
Sbjct: 12  EAAEAFYEDVLGLELMLKEDRRLAFFWVGGRGM-LLLFDPGATSTPGGEIPPHGGSGPGH 70

Query: 73  ISFQCSDMKLVMRK--LEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN 123
            +F     +L   +  LE   +  E+ V    G +   L+F DPDG ++E+  
Sbjct: 71  FAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGR--SLYFRDPDGNLLELAT 121

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 36/146 (24%)

Query: 14  KSVEKSVMFYEQVLGFVMIKRPSFN-------FEG---------------AWLFNHGIGI 51
           K  + S+ FY +VLG  ++KR  F        F G                W F     I
Sbjct: 36  KDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATI 95

Query: 52  HLL-----ESDKAPEKRGKINPKDN-----HISFQCSDMKLVMRKLEEMNIEYETAVVDE 101
            L      ESD  PE +G  N   +     HI     D+     + E++ +E+     D+
Sbjct: 96  ELTHNWGTESD--PEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKP-DD 152

Query: 102 GGIQVDQLFFHDPDGYMIEICNCQNL 127
           G ++    F  DPDGY IEI + + +
Sbjct: 153 GKMK-GLAFIKDPDGYWIEIFDLKRI 177

Length = 185

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 28/136 (20%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGA-------WLFNHG-IGIHLLE-- 55
           ++H+      +E ++ FY  VLG      P    E              G + I L+E  
Sbjct: 1   IDHIGIAVPDLEAALKFYRDVLGV----GPWEREEVPSEQGVRLAFLGLGNVQIELIEPL 56

Query: 56  SDKAP-----EKRGKINPKDNHISFQCSDMKLVMRKLEEMNIE--YETAVVDEGGIQVDQ 108
            D +P     EKRG      +HI+F+  D+   + +L+   +    E   +  GG +V  
Sbjct: 57  DDDSPIAKFLEKRG---EGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRV-- 111

Query: 109 LFFHDPD--GYMIEIC 122
            F H  D  G +IE+ 
Sbjct: 112 AFLHPKDTGGVLIELV 127

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|211357 cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 10/112 (8%)

Query: 11  FVSKSVEKSVMFYEQVLGF-VMIKRPSFNFEGAWLFNHGIGIHLLE-SDKAPEKRGK-IN 67
                +EKS+ FY  VLGF V  + P   +  A +   G  +HL E         G+  N
Sbjct: 4   LPVSDIEKSLAFYRDVLGFEVDFEHPEPLY--AQVSRDGAQLHLSEHDGDEWVPLGRGGN 61

Query: 68  PKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMI 119
                +  +  D+  +  +L+    +      ++      +    DPDG ++
Sbjct: 62  -----VYIEVDDVDALYAELKAKGAKLIVYPPEDQPWGQREFAVQDPDGNLL 108

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping. Length = 112

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 24/126 (19%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWL-----FNHGIGIHLLESD 57
           IL   HV      ++KS  FY  +LGF   +      E  +L     F H    H L   
Sbjct: 2   ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK---EYIYLRGIEEFQH----HSLVLT 54

Query: 58  KAPEKRGKINPKDNHISFQCS---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDP 114
           KAP          ++I F+ S   D+       +++       +V +GG   + L   DP
Sbjct: 55  KAPS------AALSYIGFRVSKEEDLDKAADFFQKLGHPVR--LVRDGGQP-EALRVEDP 105

Query: 115 DGYMIE 120
            GY IE
Sbjct: 106 FGYPIE 111

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|176711 cd08363, FosB, FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

 Score = 37.9 bits (88), Expect = 5e-04
 Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 18/123 (14%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMI----KRPSFNFEGAWLFNHGIGIHLLESDKAPE 61
           +NH++F   +++KS+ FY+ V    ++    K   F   G WL        L E    P 
Sbjct: 1   INHMTFSVSNLDKSISFYKHVFMEKLLVLGEKTAYFTIGGTWL-------ALNEEPDIP- 52

Query: 62  KRGKINPKDNHISFQCSD--MKLVMRKLEEMNIE-YETAVVDEGGIQVDQLFFHDPDGYM 118
            R +I     HI+F   D        +L+E  +        D    +   ++F DPDG+ 
Sbjct: 53  -RNEIRQSYTHIAFTIEDSEFDAFYTRLKEAGVNILPGRKRDVRDRK--SIYFTDPDGHK 109

Query: 119 IEI 121
           +E+
Sbjct: 110 LEV 112

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 131

>gnl|CDD|176677 cd07254, Glo_EDI_BRP_like_20, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.3 bits (87), Expect = 6e-04
 Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 37/131 (28%)

Query: 8   HVSFVSKSVEKSVMFYEQVLG------------FVMIKRPSFNFEGAWLFNHGIGIHLLE 55
           HV+     +E S+ FY ++ G            F +++ P  NF             +L 
Sbjct: 4   HVALNVDDLEASIAFYSKLFGVEPTKVRDDYAKF-LLEDPRLNF-------------VLN 49

Query: 56  SDKAPEKRGKINPKDNHISFQCSDMKLVM---RKLEEMNIEYETAVVDE--GGIQVDQLF 110
                   G      NH+  Q    + V     + E   +             +Q D+++
Sbjct: 50  ERPGAPGGG-----LNHLGVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCCYAVQ-DKVW 103

Query: 111 FHDPDGYMIEI 121
             DPDG   E+
Sbjct: 104 VTDPDGNAWEV 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 120

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 19/131 (14%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG---IHLLE--SDKAP 60
           ++HV      +E++  FYE VLG  + +      +G  +    +G   + LLE   + +P
Sbjct: 2   IDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDSP 61

Query: 61  -----EKRGKINPKDNHISFQCSDMKLVMRKLEEMNIE--YETAVVDEGGIQVDQLFFH- 112
                EK G      +HI+ +  D++  +  L+E  +    E   +   G  V   F H 
Sbjct: 62  IAKFLEKNG---GGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAHGKPV--AFLHP 116

Query: 113 -DPDGYMIEIC 122
               G +IE+ 
Sbjct: 117 KSTGGVLIELE 127

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 39/140 (27%), Positives = 52/140 (37%), Gaps = 36/140 (25%)

Query: 14  KSVEKSVMFYEQVLGFVMIKRPSFN-------FEG---------------AWLFNHGIGI 51
           K  + S+ FY +VLG  ++KR  F        F G                W F     I
Sbjct: 84  KDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATI 143

Query: 52  HLL-----ESDKAPEKRGKIN----PKD-NHISFQCSDMKLVMRKLEEMNIEYETAVVDE 101
            L      ESD  P+ +G  N    P+   HI     D+     + EE+ +E+       
Sbjct: 144 ELTHNWGTESD--PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEF--VKKPN 199

Query: 102 GGIQVDQLFFHDPDGYMIEI 121
            G      F  DPDGY IEI
Sbjct: 200 DGKMKGIAFIKDPDGYWIEI 219

Length = 233

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 27/132 (20%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG---IHLLES-DKAPE 61
           ++HV+     +E++  FY+ VL  + IKR   +  GA  +  G G     + +  D  P 
Sbjct: 1   IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDGPGAVGYGKGGGGPDFWVTKPFDGEPA 60

Query: 62  KRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAV----VDEG--GIQVDQL------ 109
             G  N    H++F     + V    +     +  A+     DEG  G++          
Sbjct: 61  TAG--NG--THVAFAAPSREAV----DAF---HAAALAAGGTDEGAPGLRPHYGPGYYAA 109

Query: 110 FFHDPDGYMIEI 121
           +  DPDG  IE 
Sbjct: 110 YVRDPDGNKIEA 121

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 35.3 bits (82), Expect = 0.003
 Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 12/105 (11%)

Query: 8   HVSFVSKSVEKSVMFYEQVLGFVMIKRPSF---NFEGAWLF-NHGIGIHL-----LESDK 58
           H+  V   ++ +  F+  +LG            N + A+     G  + +     L+ + 
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGES 61

Query: 59  APEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGG 103
             +K G   P  +HI++   D+   + +LE   +         G 
Sbjct: 62  FLDKGG---PGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGA 103

Length = 110

>gnl|CDD|176699 cd08351, ChaP_like, ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

 Score = 35.4 bits (82), Expect = 0.004
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 26/129 (20%)

Query: 5   SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRG 64
           +LNH    ++  E S  FY ++LG    K     F    L ++G+ +   + D      G
Sbjct: 4   TLNHTIVPARDREASAEFYAEILGLPWAKPFGP-FAVVKL-DNGVSLDFAQPD------G 55

Query: 65  KINPKDNHISFQCSDMKL--VMRKLEEMNIEY----------ETAVVDEGGIQVDQLFFH 112
           +I P   H +F  S+ +   +  ++ E  I+Y          +    D G      ++F 
Sbjct: 56  EIPP--QHYAFLVSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRG----VYFL 109

Query: 113 DPDGYMIEI 121
           DPDG+++EI
Sbjct: 110 DPDGHLLEI 118

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 123

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	172
PRK11478	129	putative lyase; Provisional	99.87
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.86
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.86
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.85
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.85
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.84
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.84
PLN02367	233	lactoylglutathione lyase	99.84
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.84
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.84
PLN03042	185	Lactoylglutathione lyase; Provisional	99.84
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.83
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.83
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.83
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.83
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.83
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.82
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.82
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.82
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.81
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.81
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.81
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.81
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.81
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.81
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.81
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.81
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.8
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.8
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.8
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.8
PLN02300	286	lactoylglutathione lyase	99.8
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.8
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.79
PRK06724	128	hypothetical protein; Provisional	99.79
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.79
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.79
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.79
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.79
PRK10291	129	glyoxalase I; Provisional	99.78
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.78
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.78
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.78
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.78
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.78
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.78
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.77
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.77
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.77
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.77
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.77
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.77
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.76
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.76
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.76
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.76
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.75
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.75
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.75
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.75
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.75
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.75
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.74
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.74
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.73
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.73
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.73
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.72
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.72
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.71
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.71
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.69
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.66
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.64
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.64
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.62
PLN02300	286	lactoylglutathione lyase	99.6
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.57
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.56
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.55
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.48
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.42
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.38
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.35
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.34
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.24
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.23
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.17
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.16
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	99.14
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.85
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.77
PRK10148	147	hypothetical protein; Provisional	98.71
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.71
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.6
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.55
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.53
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.5
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.42
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.39
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.29
PF15067	236	FAM124: FAM124 family	96.8
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	96.7
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	96.67
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	96.45
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	94.57
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	94.32
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	93.98
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	92.41
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	92.08
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	91.29
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	90.64
PRK11700	187	hypothetical protein; Provisional	89.78
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	89.41
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	88.61
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	88.3
PLN02367	233	lactoylglutathione lyase	88.11
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	86.33
PLN03042	185	Lactoylglutathione lyase; Provisional	85.7
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	83.28
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	81.82
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	81.24
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	80.07

>PRK11478 putative lyase; Provisional

Probab=99.87  E-value=7.7e-21  Score=128.97  Aligned_cols=122  Identities=25%  Similarity=0.375  Sum_probs=86.9

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcc----eEEEEeCCeeEEEeecCCCCc-ccCCCCCCcceEEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFE----GAWLFNHGIGIHLLESDKAPE-KRGKINPKDNHISF   75 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~----~~~~~~~~~~l~l~~~~~~~~-~~~~~~~g~~~v~~   75 (172)
                      |.+.+|+||+|.|+|+++|.+||+++||+++......+..    ..+...++..++++....... .......+..|++|
T Consensus         2 ~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~hi~f   81 (129)
T PRK11478          2 LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAF   81 (129)
T ss_pred             CCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCCCCCCceeEEEE
Confidence            4678999999999999999999999999998643211111    112223345566665432211 11122346689999


Q ss_pred             EeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           76 QCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        76 ~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      .|+|+++++++|+++|+++...... ..+|.+.+|++|||||.||+++
T Consensus        82 ~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         82 SVDDIDAAVAHLESHNVKCEAIRVD-PYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EeCCHHHHHHHHHHcCCeeeccccC-CCCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999999998754322 2235578999999999999986

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.86  E-value=1.9e-20  Score=128.69  Aligned_cols=121  Identities=12%  Similarity=0.096  Sum_probs=90.7

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC-cceEEEEeCCeeEEEeecCCCCcc----cCCCCCCcceEEEEeCCH
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN-FEGAWLFNHGIGIHLLESDKAPEK----RGKINPKDNHISFQCSDM   80 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~~l~l~~~~~~~~~----~~~~~~g~~~v~~~v~dl   80 (172)
                      |+|+.|.|+|++++++||+++|||+...+.... ....++..++..+.+.........    ......+..|++|.|+|+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~Dv   80 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSEDKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVDDA   80 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeCCH
Confidence            689999999999999999999999988764221 112223334455655543322110    012345678999999999


Q ss_pred             HHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           81 KLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        81 ~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      ++.+++|+++|+++..+|... .++.+.++++||||++|||++....
T Consensus        81 da~~~~l~~~G~~v~~~p~~~-~~~~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          81 AAAYERAVARGAKPVQEPVEE-PGELKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             HHHHHHHHHcCCeEccCceec-CCeEEEEEEeccCCcEEEEEecCCC
Confidence            999999999999999888763 4577899999999999999997665

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.86  E-value=2.9e-20  Score=128.34  Aligned_cols=120  Identities=18%  Similarity=0.241  Sum_probs=87.6

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCc--------------ceEEEEe--CCeeEEEeecCCCCcc----
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNF--------------EGAWLFN--HGIGIHLLESDKAPEK----   62 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~--------------~~~~~~~--~~~~l~l~~~~~~~~~----   62 (172)
                      +++++||+|.|+|+++|++||++ |||+...+.....              ...++..  ++..++++....+...    
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCC
Confidence            46899999999999999999999 9998765432111              1112221  3456777764322111    


Q ss_pred             -cCCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           63 -RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        63 -~~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                       ......|..|+||.|+|+++++++|+++|+++..++... +++.+.+|++||||+.|||++.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~-~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQY-ENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceec-CCCeEEEEEECCCCCEEEeeec
Confidence             112345678999999999999999999999988765443 3456889999999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=6.6e-20  Score=123.11  Aligned_cols=120  Identities=28%  Similarity=0.464  Sum_probs=86.5

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEE---EE-eCCeeEEEeecCCCCccc-CCCCCCcceEEEEe
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAW---LF-NHGIGIHLLESDKAPEKR-GKINPKDNHISFQC   77 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~---~~-~~~~~l~l~~~~~~~~~~-~~~~~g~~~v~~~v   77 (172)
                      +++|+||+|.|.|++++++||+++||+.............|   +. .++..++++......... .....+..|++|.|
T Consensus         1 ~~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~h~~~~v   80 (125)
T cd08352           1 LFGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSYPEACGLRHLAFSV   80 (125)
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCCcCCCceEEEEEe
Confidence            36899999999999999999999999998765311111122   22 234556666543322111 12345678999999


Q ss_pred             CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           78 SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        78 ~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      +|+++++++|+++|+++...+.. ..++.+.+|++||+||+|||++
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          81 EDIEAAVKHLKAKGVEVEPIRVD-EFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CCHHHHHHHHHHcCCcccccccc-CCCceEEEEEECCCCCEEEecC
Confidence            99999999999999998875533 2335678999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.85  E-value=1.1e-19  Score=128.96  Aligned_cols=148  Identities=16%  Similarity=0.178  Sum_probs=99.8

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC---cceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN---FEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      |++.+|+|+.|.|+|++++++||+++||++........   ....|+........+.......    ...++..|+||.|
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~~~~~hiaf~v   77 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPA----GARGRLHHLAYAL   77 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCC----CCCCCceEEEEEC
Confidence            78999999999999999999999999999987552111   1134443322222121111111    1123568999999


Q ss_pred             CC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC-C---CCCCCCCCCCCccccccccccc
Q 042945           78 SD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL-P---VLPLSSCPLKLPSKRSSEKAAC  150 (172)
Q Consensus        78 ~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~  150 (172)
                      +|   +++++++|+++|+++...|........+++|++||+||+|||++.... .   ...+...+...+...+.||++.
T Consensus        78 ~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (166)
T cd09014          78 DTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGGGYLILDPDWEPVTWTEEERKRGQAWGGKT  157 (166)
T ss_pred             CCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcCCceeccCCCCceecCccccccccccCCCC
Confidence            85   558889999999998765644332233569999999999999998333 2   2234455666778888898776


Q ss_pred             ch
Q 042945          151 SG  152 (172)
Q Consensus       151 ~~  152 (172)
                      -+
T Consensus       158 ~~  159 (166)
T cd09014         158 LP  159 (166)
T ss_pred             CC
Confidence            43

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.84  E-value=8.5e-20  Score=126.50  Aligned_cols=117  Identities=17%  Similarity=0.225  Sum_probs=82.4

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeec-CCCc---ceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP-SFNF---EGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~-~~~~---~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      |++++|+||+|.|+|++++.+||+++|||++..+. ....   ...|+.. +...+.+.....      ..++..|+||.
T Consensus         2 ~~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~-~~~~h~~~~~~~------~~~~~~Hiaf~   74 (143)
T cd07243           2 IGAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSC-SNKPHDIAFVGG------PDGKLHHFSFF   74 (143)
T ss_pred             CCCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEec-CCCcceEEEecC------CCCCceEEEEE
Confidence            46789999999999999999999999999976552 1111   1233322 222222221111      12467899999


Q ss_pred             eCCHHH---HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           77 CSDMKL---VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        77 v~dl~~---~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      |+|+++   ..++|.++|+++...|......+.+++||.|||||.|||.+.
T Consensus        75 v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          75 LESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             cCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            998887   568999999998766643332235789999999999999864

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.84  E-value=6.7e-20  Score=120.75  Aligned_cols=113  Identities=36%  Similarity=0.614  Sum_probs=85.3

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCe-eEEEeecCCCCcccCCCCCCcceEEEEeCCHHHHH
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGI-GIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVM   84 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~~   84 (172)
                      |+|++|.|.|++++++||+++||++...+........++...+. .+++......... ....++..|++|.|+|+++++
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~-~~~~~~~~~~~~~v~d~~~~~   79 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFPGAWLYAGDGPQLHLIEEDPPDAL-PEGPGRDDHIAFRVDDLDAFR   79 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCCCceEEEeCCCcEEEEEecCCCccc-cCCCcccceEEEEeCCHHHHH
Confidence            68999999999999999999999998765432223455554443 6677655433211 122345689999999999999


Q ss_pred             HHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEE
Q 042945           85 RKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI  121 (172)
Q Consensus        85 ~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei  121 (172)
                      +++.++|+++..++..  .++.+++|+.||+||+||+
T Consensus        80 ~~l~~~g~~~~~~~~~--~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          80 ARLKAAGVPYTESDVP--GDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHcCCCcccccCC--CCCccEEEEECCCCCEEeC
Confidence            9999999998876643  2345789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>PLN02367 lactoylglutathione lyase

Probab=99.84  E-value=2e-19  Score=132.09  Aligned_cols=121  Identities=25%  Similarity=0.390  Sum_probs=89.4

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC---cceEEEE-------------------eCCeeEEEeecCCCCc-
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN---FEGAWLF-------------------NHGIGIHLLESDKAPE-   61 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~---~~~~~~~-------------------~~~~~l~l~~~~~~~~-   61 (172)
                      .+.|+.|+|+|+++|++||+++||+++..+.++.   ....++.                   ..+..++|+....... 
T Consensus        75 ~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~~  154 (233)
T PLN02367         75 IMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESD  154 (233)
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCcc
Confidence            5899999999999999999999999998764333   2233332                   1124677876543221 


Q ss_pred             ------ccCC-CCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           62 ------KRGK-INPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        62 ------~~~~-~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                            ..++ ...|..||||.|+|+++++++|++.|+++...|.....  .+.+|++|||||+|||++....
T Consensus       155 ~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        155 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             ccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEecccc
Confidence                  0011 12478999999999999999999999999877754322  3678999999999999986553

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.84  E-value=2.2e-19  Score=120.50  Aligned_cols=121  Identities=22%  Similarity=0.353  Sum_probs=88.1

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCC-cccCCCCCCcceEEEEeCC-H
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP-EKRGKINPKDNHISFQCSD-M   80 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~g~~~v~~~v~d-l   80 (172)
                      +++|+|+.|.|.|++++++||+++||++.....+.. ...++..++..+++....... ........+..|++|.+++ +
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hi~~~~~~~~   79 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV-GRKALRFGSQKINLHPVGGEFEPAAGSPGPGSDDLCLITEPPI   79 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC-CceEEEeCCEEEEEecCCCccCcCccCCCCCCceEEEEecccH
Confidence            468999999999999999999999999988764311 223333344556665433221 1122234677899999974 9


Q ss_pred             HHHHHHHHhCCCeEeeceeecCC--eeEEEEEEECCCCCEEEEEee
Q 042945           81 KLVMRKLEEMNIEYETAVVDEGG--IQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        81 ~~~~~~l~~~G~~i~~~~~~~~~--~g~~~~~~~DPdG~~iei~~~  124 (172)
                      ++++++|.++|+++...+....+  .+.+.+|++|||||+||++++
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          80 DELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             HHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            99999999999998876644322  234789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.84  E-value=1.5e-19  Score=121.56  Aligned_cols=117  Identities=19%  Similarity=0.243  Sum_probs=83.3

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeec---CCCcceEEEEe-CCeeEEEeecCCCCcc-cCCCCCCcceEEEEeC-
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP---SFNFEGAWLFN-HGIGIHLLESDKAPEK-RGKINPKDNHISFQCS-   78 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~---~~~~~~~~~~~-~~~~l~l~~~~~~~~~-~~~~~~g~~~v~~~v~-   78 (172)
                      +|+||+|.|+|++++++||+++||++.....   ..+....|+.. ++..+++++....... ......|..|+||.|+ 
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~v~~   80 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSPNEGERTGWAHLAFSVGS   80 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCcccCCCCceEEEEEECCC
Confidence            5799999999999999999999999975431   11222334433 3456777754322111 1123356789999995 


Q ss_pred             --CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEE
Q 042945           79 --DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC  122 (172)
Q Consensus        79 --dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~  122 (172)
                        ++++++++|+++|+++..++... ++|.+.++++|||||.|||.
T Consensus        81 ~~~v~~~~~~l~~~g~~~~~~~~~~-~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          81 KEAVDELTERLRADGYLIIGEPRTT-GDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             HHHHHHHHHHHHHCCCEEEeCceec-CCCeEEEEEECCCCCEEEeC
Confidence              58999999999999988766433 33446678999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.84  E-value=3.2e-19  Score=128.10  Aligned_cols=122  Identities=25%  Similarity=0.363  Sum_probs=88.8

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC---cceEEEE-------------------eCCeeEEEeecCCCCc
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN---FEGAWLF-------------------NHGIGIHLLESDKAPE   61 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~---~~~~~~~-------------------~~~~~l~l~~~~~~~~   61 (172)
                      -++.|+.|+|.|+++|++||+++|||++..+...+   ....++.                   ..+..++|+.......
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~  105 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTES  105 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcc
Confidence            46899999999999999999999999997764222   1222322                   1234677876443221


Q ss_pred             -------cc-CCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           62 -------KR-GKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        62 -------~~-~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                             .. .....|..|++|.|+|+++++++|+++|+++...|....+  .+.+|++||||++|||++....
T Consensus       106 ~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~--~~~~fi~DPdG~~IEl~e~~~~  177 (185)
T PLN03042        106 DPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKM--KGLAFIKDPDGYWIEIFDLKRI  177 (185)
T ss_pred             cccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCc--eeEEEEECCCCCEEEEEECCCc
Confidence                   00 1113578999999999999999999999998876643222  3568899999999999996654

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.83  E-value=2.3e-19  Score=126.83  Aligned_cols=124  Identities=21%  Similarity=0.308  Sum_probs=86.3

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeec----CC------------C-----cceEEEE-eCCeeEEEeecCCCCc
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP----SF------------N-----FEGAWLF-NHGIGIHLLESDKAPE   61 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~------------~-----~~~~~~~-~~~~~l~l~~~~~~~~   61 (172)
                      ++|+||.|.|+|+++|++||+++||+++..+.    ..            +     ....++. .++..+++++......
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            67999999999999999999999999875321    00            0     0112222 2345688887653221


Q ss_pred             ccC---CCCCCcceEEEEeCCHHHHHHHHHhCCCeEeece-eec-CC-eeEEEEEEECCCCCEEEEEeecCC
Q 042945           62 KRG---KINPKDNHISFQCSDMKLVMRKLEEMNIEYETAV-VDE-GG-IQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        62 ~~~---~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~-~~~-~~-~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      ...   ....|..|+||.|+|+++++++|+++|+++...+ ... .+ .+.+.+|++|||||.|||++..+.
T Consensus        83 ~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  154 (162)
T TIGR03645        83 PEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYE  154 (162)
T ss_pred             CCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcChh
Confidence            111   1246789999999999999999999998754322 111 11 123789999999999999987653

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.83  E-value=3.2e-19  Score=122.99  Aligned_cols=119  Identities=27%  Similarity=0.449  Sum_probs=88.5

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC--C
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS--D   79 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~--d   79 (172)
                      ++++|+|+.|.|+|++++++||+++||+++..+.   ....++..++..+.+......+  ......+..|++|.++  |
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~---~~~~~~~~~g~~l~l~~~~~~~--~~~~~~~~~hiaf~v~~~d   75 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKG---RKTAYFDLNGLWIALNEEKDIP--RNEIHQSYTHIAFSIEEED   75 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeec---CeeEEEecCCeEEEeeccCCCC--CccCCCCeeEEEEEecHHH
Confidence            3678999999999999999999999999987652   2234454455555554322111  1122345679999998  9


Q ss_pred             HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           80 MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +++++++|+++|+++...+.... ++.+++|++|||||+||+.+...
T Consensus        76 v~~~~~~l~~~G~~i~~~~~~~~-~~~~~~~~~DPdGn~iEl~~~~~  121 (139)
T PRK04101         76 FDHWYQRLKENDVNILPGRERDE-RDKKSIYFTDPDGHKFEFHTGTL  121 (139)
T ss_pred             HHHHHHHHHHCCceEcCCccccC-CCceEEEEECCCCCEEEEEeCCH
Confidence            99999999999999876554333 24588999999999999997544

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.83  E-value=1.5e-19  Score=126.62  Aligned_cols=121  Identities=17%  Similarity=0.115  Sum_probs=81.4

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC----cceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCH
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN----FEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDM   80 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl   80 (172)
                      +|+||+|.|+|++++++||+++||+++..+....    ....|+...+.. .++......... ...++..|+||.|+|+
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~l~~-~~~~g~~Hiaf~v~di   78 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGE-EYVDHHTLALAQ-GPESGVHHAAFEVHDF   78 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCC-CcccchHHHHhc-CCCCceeEEEEEcCCH
Confidence            5899999999999999999999999987542111    123333322110 000000000001 1145789999999999


Q ss_pred             HHHH---HHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           81 KLVM---RKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        81 ~~~~---~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      +++.   ++|+++|+++...+.........++|++||+||.|||+.....
T Consensus        79 e~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~~  128 (153)
T cd07257          79 DAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGDL  128 (153)
T ss_pred             HHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCcee
Confidence            9986   9999999998866544321123568999999999999976654

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.83  E-value=4.5e-19  Score=121.05  Aligned_cols=116  Identities=19%  Similarity=0.354  Sum_probs=83.5

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC----cceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN----FEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS   78 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~   78 (172)
                      +.+|+||.|.|+|++++++||+++||++...+....    ....+...++..+.+......      ...+..|++|.|+
T Consensus         2 i~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~------~~~~~~Hiaf~v~   75 (131)
T cd08364           2 IEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEGDSL------QERTYNHIAFKIS   75 (131)
T ss_pred             cccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCCeEEEEecCCCC------CCCCceEEEEEcC
Confidence            678999999999999999999999999886653111    011233333445555532211      1235689999998


Q ss_pred             --CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           79 --DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        79 --dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                        +++++.++|.++|+++..+.....+ +.+++||+|||||.|||.+..
T Consensus        76 ~~~ld~~~~~l~~~gv~~~~~~~~~~~-~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          76 DSDVDEYTERIKALGVEMKPPRPRVQG-EGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             HHHHHHHHHHHHHCCCEEecCCccccC-CceEEEEECCCCCEEEEecCC
Confidence              8999999999999987754322222 247999999999999999643

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.83  E-value=4.9e-19  Score=124.53  Aligned_cols=117  Identities=21%  Similarity=0.344  Sum_probs=85.4

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC---CeeEEEeecCCCCcccCCCCCCcceEEEEeCC--
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH---GIGIHLLESDKAPEKRGKINPKDNHISFQCSD--   79 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d--   79 (172)
                      +|+||+|.|+|+++|.+||+++||++...+..  ....+...+   +..+.+....... .......+..|++|.|+|  
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~l~Hiaf~v~d~~   77 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG--DRVRLEEGGGGPGAVVDVLEEPDQP-RGRPGAGTVHHVAFRVPDDE   77 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC--CEEEEEecCCCCCCEEEEEeCCCCC-CCcccCCceEEEEEECCCHH
Confidence            58999999999999999999999999876632  122333332   4556666643211 111223466899999997  


Q ss_pred             -HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           80 -MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        80 -l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                       +++++++|+++|+++.. +... ++ .+++|++|||||.|||+++.+.
T Consensus        78 dvd~~~~~L~~~Gv~~~~-~~~~-~~-~~s~yf~DPdG~~iEl~~~~~~  123 (157)
T cd08347          78 ELEAWKERLEALGLPVSG-IVDR-FY-FKSLYFREPGGILFEIATDGPG  123 (157)
T ss_pred             HHHHHHHHHHHCCCCccc-cccc-cc-EEEEEEECCCCcEEEEEECCCC
Confidence             99999999999998653 3322 22 4789999999999999997654

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=4.5e-19  Score=119.04  Aligned_cols=116  Identities=22%  Similarity=0.297  Sum_probs=80.6

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecC--CCCcccCCCCCCcceEEEEeCCHH
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESD--KAPEKRGKINPKDNHISFQCSDMK   81 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--~~~~~~~~~~~g~~~v~~~v~dl~   81 (172)
                      +++.|+.|.|+|+++|++||+++||+++....  +. .. ....+..+.+....  ...........+..|++|.|+|++
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~--~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~dvd   76 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDF--GE-NV-TFEGGFALQEGYSWLEGISKADIIEKSNNFELYFEEEDFD   76 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeecc--Cc-eE-EEeccceeccchhhhccCCcccccccCCceEEEEEehhhH
Confidence            36899999999999999999999999986432  11 11 11222222211100  000011112345579999999999


Q ss_pred             HHHHHHHhCCC-eEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           82 LVMRKLEEMNI-EYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        82 ~~~~~l~~~G~-~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +++++|+++|+ ++..+|.. .+||.+.+|++|||||+|||.+.
T Consensus        77 ~~~~~l~~~g~~~~~~~~~~-~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          77 AFLDKLKRYDNIEYVHPIKE-HPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             HHHHHHHhcCCcEEecCccc-CCCccEEEEEECCCCCEEEEecc
Confidence            99999999985 67776654 44677899999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.82  E-value=1e-18  Score=115.98  Aligned_cols=113  Identities=16%  Similarity=0.172  Sum_probs=82.6

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC-eeEEEeecCCCCcccCCCCCCcceEEEEeCCHHHHH
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG-IGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVM   84 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~~   84 (172)
                      +.|+.|.|+|++++++||+++||+++...........++..++ ....++......    ...+...|++|.++|+++++
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~f~v~di~~~~   76 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGDGGGDYAVFSTGGGAVGGLMKAPEPA----AGSPPGWLVYFAVDDVDAAA   76 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccCCCCceEEEEeCCccEEEEecCCCCC----CCCCCeEEEEEEeCCHHHHH
Confidence            4799999999999999999999999876532111222232332 234444433221    12345679999999999999


Q ss_pred             HHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           85 RKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        85 ~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      ++|+++|+++..++....+ +.+.++++|||||.|++++
T Consensus        77 ~~l~~~g~~~~~~~~~~~~-~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          77 ARVEAAGGKVLVPPTDIPG-VGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHCCCEEEeCCcccCC-cEEEEEEECCCCCEEEeEC
Confidence            9999999999887765443 4488999999999999974

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.82  E-value=3.4e-19  Score=120.46  Aligned_cols=119  Identities=18%  Similarity=0.258  Sum_probs=83.8

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC---CcceEEEEeCCeeEEEeecCCCCccc----CCCCCCcceEEEEe
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF---NFEGAWLFNHGIGIHLLESDKAPEKR----GKINPKDNHISFQC   77 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~----~~~~~g~~~v~~~v   77 (172)
                      +|+|+.|.|+|++++++||+++||++.......   +....++..++..+++..........    .....+..|+||.|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v   80 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEV   80 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEc
Confidence            589999999999999999999999998654211   12223333445667776542221110    11234667999999


Q ss_pred             CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEE--ECCCCCEEEEEe
Q 042945           78 SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFF--HDPDGYMIEICN  123 (172)
Q Consensus        78 ~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~--~DPdG~~iei~~  123 (172)
                      +|+++++++|.++|+++..++.....+|.+.+|+  +||||++||+.|
T Consensus        81 ~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        81 DDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            9999999999999999886422223345455666  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.81  E-value=1.4e-18  Score=121.26  Aligned_cols=123  Identities=21%  Similarity=0.255  Sum_probs=85.1

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCc---ceEEEEeC-C---eeEEEeecCCCCcccCCCCCCcceEE
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNF---EGAWLFNH-G---IGIHLLESDKAPEKRGKINPKDNHIS   74 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~---~~~~~~~~-~---~~l~l~~~~~~~~~~~~~~~g~~~v~   74 (172)
                      +.++|+||.|.|+|++++.+||+++|||++..+.+...   ...++... +   ..+++......  .+.....+..|++
T Consensus        14 ~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~g~~hi~   91 (150)
T TIGR00068        14 KKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGT--EKYDLGNGFGHIA   91 (150)
T ss_pred             CCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCC--CcccCCCceeEEE
Confidence            35789999999999999999999999999876532211   12222211 1   11222221111  1112234678999


Q ss_pred             EEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           75 FQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        75 ~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      |.|+|+++++++|.++|+++..++....+.+.+.+|++||+||.|||++...
T Consensus        92 f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  143 (150)
T TIGR00068        92 IGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKS  143 (150)
T ss_pred             EecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCc
Confidence            9999999999999999999887664333223467899999999999998654

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=1.2e-18  Score=115.91  Aligned_cols=114  Identities=17%  Similarity=0.267  Sum_probs=81.7

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEe--C---CeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHH
Q 042945            8 HVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFN--H---GIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKL   82 (172)
Q Consensus         8 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~--~---~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~   82 (172)
                      ||.|.|.|++++++||+++||+++..+........++..  .   +..+++..............++..|++|.|+|+++
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di~~   80 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAPPANPAAMSGLQPGGTPGLVLATDDIDA   80 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeCCCCccccccccCCCceEEEEEehHHHH
Confidence            899999999999999999999999876431122233322  1   23344443332211112234566799999999999


Q ss_pred             HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           83 VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        83 ~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      ++++|+++|+++..++... ++ .+.+|++||+||.|||++
T Consensus        81 ~~~~l~~~g~~~~~~~~~~-~~-~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          81 TYEELKARGVEFSEEPREM-PY-GTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHhCCCEEeeccccC-CC-ceEEEEECCCCCEEEEeC
Confidence            9999999999999877332 23 478999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.81  E-value=1e-18  Score=119.27  Aligned_cols=115  Identities=23%  Similarity=0.385  Sum_probs=84.5

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC--CHHHH
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS--DMKLV   83 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~--dl~~~   83 (172)
                      |+||.|.|+|++++++||+++||+++..+.   ....++..++..+.+......+  ......+..|++|.++  |++++
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~--~~~~~~~~~hiaf~v~~~dld~~   75 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLG---EKTAYFTIGGTWLALNEEPDIP--RNEIRQSYTHIAFTIEDSEFDAF   75 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccC---CccceEeeCceEEEEEccCCCC--cCCcCccceEEEEEecHHHHHHH
Confidence            689999999999999999999999987542   1223444455666554433211  1222346789999998  59999


Q ss_pred             HHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           84 MRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        84 ~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +++|.++|+++..++.... ++.+.+|++|||||+||+.+...
T Consensus        76 ~~~l~~~G~~~~~~~~~~~-~~~~~~~f~DPdG~~iEl~~~~~  117 (131)
T cd08363          76 YTRLKEAGVNILPGRKRDV-RDRKSIYFTDPDGHKLEVHTGTL  117 (131)
T ss_pred             HHHHHHcCCcccCCCcccc-CcceEEEEECCCCCEEEEecCcH
Confidence            9999999999875443222 24588999999999999998644

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.81  E-value=1.9e-18  Score=115.65  Aligned_cols=114  Identities=30%  Similarity=0.411  Sum_probs=82.6

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC---cceEEEEeCC----eeEEEeecCCCCcccCCCCCCcceEEEEeC
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN---FEGAWLFNHG----IGIHLLESDKAPEKRGKINPKDNHISFQCS   78 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~---~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~   78 (172)
                      |.|+.|.|+|++++.+||+++||++........   ....++...+    ..+++........ ......+..|++|.|+
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~v~   79 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEE-PYDNGNGFGHLAFAVD   79 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCC-CcCCCCCeEEEEEEeC
Confidence            579999999999999999999999987653221   1223343322    3355544322211 1122346689999999


Q ss_pred             CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEE
Q 042945           79 DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC  122 (172)
Q Consensus        79 dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~  122 (172)
                      |+++++++++++|+++..++....  +.+.+|++||+||++|++
T Consensus        80 did~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          80 DVYAACERLEEMGVEVTKPPGDGG--MKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             CHHHHHHHHHHCCCEEeeCCccCC--CceEEEEECCCCCEEEeC
Confidence            999999999999999998776542  347799999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.81  E-value=1.9e-18  Score=116.26  Aligned_cols=114  Identities=18%  Similarity=0.216  Sum_probs=80.6

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC--CeeEEEeecCCCCcccCCCCCCcceEEEEeC--
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH--GIGIHLLESDKAPEKRGKINPKDNHISFQCS--   78 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~--   78 (172)
                      +++|+|+.|.|.|+++|++||+++||++......  ....++...  +....+.-.. .      ...+..|++|.|+  
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~-~------~~~~~~hiaf~v~~~   72 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QGRVYLKAWDEFDHHSIVLRE-A------DTAGLDFMGFKVLDD   72 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--CceEEEEccCCCcccEEEecc-C------CCCCeeEEEEEeCCH
Confidence            5789999999999999999999999999876531  122333221  1111111111 1      1335689999997  


Q ss_pred             -CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           79 -DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        79 -dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                       +++++.++|+++|+++...+........+.+|++|||||.||+....
T Consensus        73 ~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          73 ADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             HHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence             89999999999999987654322221236899999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.81  E-value=1.3e-18  Score=121.95  Aligned_cols=118  Identities=16%  Similarity=0.265  Sum_probs=82.6

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC------CcceEEEEeCCe--eEEEeecCCCCcccCCCCCCcceEE
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF------NFEGAWLFNHGI--GIHLLESDKAPEKRGKINPKDNHIS   74 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~--~l~l~~~~~~~~~~~~~~~g~~~v~   74 (172)
                      .++|+||.|.|.|++++.+||+++||+++..+...      .....++..++.  .+.+...        ....+..|++
T Consensus         7 ~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~--------~~~~g~~Hia   78 (154)
T cd07237           7 DQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEG--------PGPKRIHHLM   78 (154)
T ss_pred             CCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcC--------CCCceeEEEE
Confidence            37899999999999999999999999998654211      111223322211  1222111        1134678999


Q ss_pred             EEeCCHH---HHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCC
Q 042945           75 FQCSDMK---LVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLP  128 (172)
Q Consensus        75 ~~v~dl~---~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~  128 (172)
                      |.|+|++   +++++|+++|+++..++......+.+++|++||+|+.|||.......
T Consensus        79 f~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~  135 (154)
T cd07237          79 LEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGRTV  135 (154)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCceEc
Confidence            9998654   68999999999998766443323458899999999999998755443

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.81  E-value=3.9e-18  Score=116.81  Aligned_cols=115  Identities=23%  Similarity=0.242  Sum_probs=82.9

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC-e---eEEEeecCCCCcccCCCCCCcceEEEEeCC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG-I---GIHLLESDKAPEKRGKINPKDNHISFQCSD   79 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~---~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d   79 (172)
                      ++|+||.|.|.|+++|++||+++||++...+..  ....|+...+ .   .+.+.....       ...+..|++|.|+|
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~~~~~~~~~~~~~~~~i~l~~~~~-------~~~g~~hiaf~v~d   72 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--GRGAFLRAAGGGDHHNLFLIKTPA-------PMAGFHHAAFEVGD   72 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--CcEEEEECCCCCCCcEEEEecCCC-------CCCcceEEEEEeCC
Confidence            579999999999999999999999999876532  2244543321 1   233322211       13578899999998


Q ss_pred             HHHHH---HHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           80 MKLVM---RKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        80 l~~~~---~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      ++++.   ++|.++|+++...+......+.+++|++||+|+.|||......
T Consensus        73 ~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~~  123 (134)
T cd08360          73 IDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMDY  123 (134)
T ss_pred             HHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccccc
Confidence            88776   5999999998765543322234679999999999999975444

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.81  E-value=1.9e-18  Score=115.63  Aligned_cols=115  Identities=18%  Similarity=0.260  Sum_probs=84.0

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEe---CC
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQC---SD   79 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v---~d   79 (172)
                      +.+|+|+.|.|+|++++++||+++||++......   ...++...+...+++.....+      .++..|++|.|   ++
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v~~~~~   71 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD---GIVYLRATGSEHHILRLRRSD------RNRLDVVSFSVASRAD   71 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC---CEEEEECCCCccEEEEeccCC------CCCCceEEEEeCCHHH
Confidence            4689999999999999999999999999875532   234444333323333222111      23567999999   57


Q ss_pred             HHHHHHHHHhCCCeEeeceeec-CCeeEEEEEEECCCCCEEEEEeecC
Q 042945           80 MKLVMRKLEEMNIEYETAVVDE-GGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~-~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +++++++|+++|+++..++... .+++.+.++++||+||.||+++..+
T Consensus        72 l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  119 (120)
T cd08362          72 VDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADVE  119 (120)
T ss_pred             HHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEeccc
Confidence            9999999999999988765322 2345678999999999999998643

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=3.5e-18  Score=115.10  Aligned_cols=116  Identities=17%  Similarity=0.237  Sum_probs=80.4

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCC-----C-C--cccCCCCCCcceEEEEe
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDK-----A-P--EKRGKINPKDNHISFQC   77 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-----~-~--~~~~~~~~g~~~v~~~v   77 (172)
                      +.|+.|.|+|++++.+||+++||++.......+ .-..+..++..+.+.....     . .  .......++..+++|.|
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   79 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHESG-DYGELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIAFVT   79 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCCC-cEEEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEEEEc
Confidence            579999999999999999999999986542211 1111222233333322110     0 0  00111233457999999


Q ss_pred             CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           78 SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        78 ~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      +|++++++++.++|+++..++... +||.+.++++|||||.||+++
T Consensus        80 ~di~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~~~~~~  124 (125)
T cd07264          80 DDVAAAFARAVEAGAVLVSEPKEK-PWGQTVAYVRDINGFLIELCS  124 (125)
T ss_pred             CCHHHHHHHHHHcCCEeccCCccC-CCCcEEEEEECCCCCEEEEec
Confidence            999999999999999998776543 466788999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=4.8e-18  Score=115.02  Aligned_cols=117  Identities=26%  Similarity=0.454  Sum_probs=87.6

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhh---CCEEeeecCCCcceEEEEe-CCeeEEEeecCCCCcc-cCCCCCCcceEEEEeC-
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVL---GFVMIKRPSFNFEGAWLFN-HGIGIHLLESDKAPEK-RGKINPKDNHISFQCS-   78 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~L---G~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~-~~~~~~g~~~v~~~v~-   78 (172)
                      +|+||.|.|.|++++++||+++|   |++...+.+  ....|... .+..+.+......... ......+..|++|.|+ 
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~hia~~v~~   78 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--DGRSWRAGDGGTYLVLQQADGESAGRHDRRNPGLHHLAFRAPS   78 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--cCceEEecCCceEEEEEecccCCCcccccCCcCeeEEEEEcCC
Confidence            58999999999999999999999   999887631  23344443 5566777665432211 1123456689999997 


Q ss_pred             --CHHHHHHHHHhCCCeEeeceeec--CCeeEEEEEEECCCCCEEEEEe
Q 042945           79 --DMKLVMRKLEEMNIEYETAVVDE--GGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        79 --dl~~~~~~l~~~G~~i~~~~~~~--~~~g~~~~~~~DPdG~~iei~~  123 (172)
                        |+++++++|+++|+++...+...  ...+.+.+|++|||||++||+.
T Consensus        79 ~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          79 REAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             HHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence              58999999999999998876542  1224588999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=6.8e-18  Score=113.73  Aligned_cols=116  Identities=27%  Similarity=0.356  Sum_probs=84.2

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC--eeEEEeecCCCCcccCCCCCCcceEEEEeC---
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG--IGIHLLESDKAPEKRGKINPKDNHISFQCS---   78 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~---   78 (172)
                      ++|+||.|.|.|++++++||+++||+++....   ....++...+  ..+.+....... .......+..|++|.|+   
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~~~~~l~~~~~~~~l~l~~~~~~~-~~~~~~~~~~hi~f~v~~~~   76 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERT---DSTAVLGTGGKRPLLVLEEDPDAP-PAPPGATGLYHFAILLPSRA   76 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcC---CCEEEEecCCCeEEEEEEeCCCCC-cccCCCCcEEEEEEECCCHH
Confidence            47999999999999999999999999998763   2344444333  234444333221 11223456789999997   


Q ss_pred             CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           79 DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        79 dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      ++++++++|.++|+++..+. . .++ .+.+|++|||||++||.+..+
T Consensus        77 ~v~~~~~~l~~~g~~~~~~~-~-~~~-~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          77 DLAAALRRLIELGIPLVGAS-D-HLV-SEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             HHHHHHHHHHHcCCceeccc-c-ccc-eeEEEEECCCCCEEEEEEecC
Confidence            59999999999999876532 2 233 367999999999999998655

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.80  E-value=4e-18  Score=114.99  Aligned_cols=111  Identities=23%  Similarity=0.379  Sum_probs=81.7

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEE-eCCeeEEEeecCCCCcccCCCCCCcceEEEEeC--C
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF-NHGIGIHLLESDKAPEKRGKINPKDNHISFQCS--D   79 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~--d   79 (172)
                      ..+++|+.|.|+|+++|++||+++||++.....  + ...++. ..+..+.+....        ...+..|++|.++  |
T Consensus         2 ~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~--~-~~~~~~~~~~~~l~~~~~~--------~~~~~~h~a~~v~~~d   70 (123)
T cd08351           2 TVTLNHTIVPARDREASAEFYAEILGLPWAKPF--G-PFAVVKLDNGVSLDFAQPD--------GEIPPQHYAFLVSEEE   70 (123)
T ss_pred             cceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc--C-CEEEEEcCCCcEEEEecCC--------CCCCcceEEEEeCHHH
Confidence            368999999999999999999999999987532  1 122222 233344443321        1124579999886  7


Q ss_pred             HHHHHHHHHhCCCeEeeceeec------CCeeEEEEEEECCCCCEEEEEee
Q 042945           80 MKLVMRKLEEMNIEYETAVVDE------GGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~------~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +++++++|+++|+++...|...      ..+|.+.+|++|||||.||+++.
T Consensus        71 l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          71 FDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             HHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            9999999999999987665432      13456899999999999999985

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PLN02300 lactoylglutathione lyase

Probab=99.80  E-value=4.1e-18  Score=130.70  Aligned_cols=126  Identities=17%  Similarity=0.262  Sum_probs=90.0

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC---cceEEEEeCC----eeEEEeecCCCCcccCCCCCCcceE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN---FEGAWLFNHG----IGIHLLESDKAPEKRGKINPKDNHI   73 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~---~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~g~~~v   73 (172)
                      |.+.+|.|+.|.|+|++++++||+++|||+...+.+..   ....|+..+.    ..+++......  .......+..|+
T Consensus        20 ~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~~~~~~~g~~hi   97 (286)
T PLN02300         20 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGV--DKYDIGTGFGHF   97 (286)
T ss_pred             cccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCC--CccccCCCccEE
Confidence            46789999999999999999999999999987653211   1233442221    12333321111  111234577899


Q ss_pred             EEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCC
Q 042945           74 SFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLP  128 (172)
Q Consensus        74 ~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~  128 (172)
                      +|.|+|+++++++|.++|+++...+....+.+.+.+|++|||||.|||++..+.+
T Consensus        98 a~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~  152 (286)
T PLN02300         98 GIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTP  152 (286)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCC
Confidence            9999999999999999999988766544322346789999999999999976553

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.80  E-value=4.9e-18  Score=112.92  Aligned_cols=110  Identities=14%  Similarity=0.210  Sum_probs=81.0

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHH
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKL   82 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~   82 (172)
                      +++|+|+.|.|.|+++|++||++ |||+...+.+   ...|+...+....++.....      ..++..|++|.|+|.++
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~af~v~~~~~   70 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD---DELYYRGYGTDPFVYVARKG------EKARFVGAAFEAASRAD   70 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC---CeEEEecCCCccEEEEcccC------CcCcccEEEEEECCHHH
Confidence            57899999999999999999999 9999876532   34454433323233322111      12466899999999999


Q ss_pred             HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           83 VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        83 ~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +.+.+++.|+.+...+.  ..++.+.+||+|||||.||++..
T Consensus        71 ~~~~~~~~g~~~~~~~~--~~~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          71 LEKAAALPGASVIDDLE--APGGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             HHHHHHcCCCeeecCCC--CCCCceEEEEECCCCCEEEEEec
Confidence            99999999998765432  22345789999999999999875

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.79  E-value=3.4e-18  Score=114.92  Aligned_cols=114  Identities=24%  Similarity=0.318  Sum_probs=81.5

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC-eeEEEeecCCCCcccCCCCCCcceEEEEeC-
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG-IGIHLLESDKAPEKRGKINPKDNHISFQCS-   78 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~-   78 (172)
                      |.+++|+|+.|.|+|++++.+||+++||++...+.+   ...++...+ ...+.+.....      ...+..|++|.++ 
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~---~~~~l~~~~~~~~~~~~l~~~------~~~~~~h~af~v~~   72 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG---QSVYLRAWGDYEHHSLKLTES------PEAGLGHIAWRASS   72 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC---CeEEEEeccCCCccEEEEeeC------CCCceEEEEEEcCC
Confidence            678999999999999999999999999999887632   233443222 11111111111      1346789999997 


Q ss_pred             --CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           79 --DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        79 --dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                        +++++++++.++|+++...+.. .+. ...+|++|||||.+|+....
T Consensus        73 ~~~v~~~~~~l~~~G~~~~~~~~~-~~~-~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          73 PEALERRVAALEASGLGIGWIEGD-PGH-GKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             HHHHHHHHHHHHHcCCccccccCC-CCC-cceEEEECCCCCEEEEEEec
Confidence              6889999999999987543322 222 36799999999999999753

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>PRK06724 hypothetical protein; Provisional

Probab=99.79  E-value=6.8e-18  Score=114.83  Aligned_cols=111  Identities=21%  Similarity=0.320  Sum_probs=78.7

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhh---CCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEe--
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVL---GFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQC--   77 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~L---G~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v--   77 (172)
                      +.+|+||.|.|+|+++|++||+++|   |++....      ..+ ..++..+.+......    .....+..|+||.|  
T Consensus         5 ~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~------~~~-~~g~~~l~l~~~~~~----~~~~~g~~h~af~v~~   73 (128)
T PRK06724          5 RAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNE------VAY-STGESEIYFKEVDEE----IVRTLGPRHICYQAIN   73 (128)
T ss_pred             CcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeee------Eee-eCCCeeEEEecCCcc----ccCCCCceeEEEecCC
Confidence            4679999999999999999999977   5554311      111 112223333322111    11234678999998  


Q ss_pred             -CCHHHHHHHHHhCCCeEeeceeecC--CeeEEEEEEECCCCCEEEEEee
Q 042945           78 -SDMKLVMRKLEEMNIEYETAVVDEG--GIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        78 -~dl~~~~~~l~~~G~~i~~~~~~~~--~~g~~~~~~~DPdG~~iei~~~  124 (172)
                       +++++++++|.++|+++..+|....  ++|.+++||+|||||.||+...
T Consensus        74 ~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         74 RKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             hHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence             6899999999999999887665432  3566889999999999999865

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.79  E-value=5.8e-18  Score=113.81  Aligned_cols=115  Identities=22%  Similarity=0.387  Sum_probs=81.7

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecC-CCc-ce--EEEEe----CCeeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNF-EG--AWLFN----HGIGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-~~~-~~--~~~~~----~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      +|+||.|.|.|++++++||+++||++...+.. .+. ..  .++..    .+..++++..............+..|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            57999999999999999999999999876532 111 11  22221    234566665543221111223456899999


Q ss_pred             eC---CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEE
Q 042945           77 CS---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC  122 (172)
Q Consensus        77 v~---dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~  122 (172)
                      |+   ++++++++++++|+++..++.. .  +.+.+|++||+||+|||+
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~~-~--~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVDH-F--GERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEee-c--ceEEEEEECCCCCEEEeC
Confidence            98   5799999999999998764433 2  458899999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.79  E-value=4.9e-19  Score=119.08  Aligned_cols=117  Identities=25%  Similarity=0.381  Sum_probs=80.8

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecC---CC--cceEEEEeCCeeEEEeecCCCCcccCCC---CCCcceEEEE
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS---FN--FEGAWLFNHGIGIHLLESDKAPEKRGKI---NPKDNHISFQ   76 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~---~~g~~~v~~~   76 (172)
                      +|+||+|.|+|++++++||+++||+++.....   ..  ....+...+...+.+.............   ..+..|+++.
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~   80 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFL   80 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEE
Confidence            68999999999999999999999999988643   11  1122333344445555443222111111   0134566666


Q ss_pred             e---CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEE
Q 042945           77 C---SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI  121 (172)
Q Consensus        77 v---~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei  121 (172)
                      +   +|+++++++|++.|+++..++......+...+|++||+||.|||
T Consensus        81 ~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   81 AFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             ESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             eccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            6   48889999999999999988765544344667899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.79  E-value=6.4e-18  Score=119.31  Aligned_cols=142  Identities=21%  Similarity=0.288  Sum_probs=88.3

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC-Cc--ceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCC-
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF-NF--EGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSD-   79 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~--~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d-   79 (172)
                      ++|+||+|.|+|++++++||+++||+++...... ..  ...|+...+. .+.+...      ....++..|++|.|+| 
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~-~~~i~l~------~~~~~~~~Hiaf~v~~~   74 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGG-VHDTALT------GGNGPRLHHVAFWVPEP   74 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCC-cceEEEe------cCCCCceeEEEEEcCCH
Confidence            6899999999999999999999999998754311 11  1223322211 1111111      0113467899999985 


Q ss_pred             --HHHHHHHHHhCCCeE--eeceeecCCeeEEEEEEECCCCCEEEEEeecCC---CCCCCCCCCCCCcccccccccccch
Q 042945           80 --MKLVMRKLEEMNIEY--ETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL---PVLPLSSCPLKLPSKRSSEKAACSG  152 (172)
Q Consensus        80 --l~~~~~~l~~~G~~i--~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  152 (172)
                        +++++++|+++|+.+  ...|......+.+++|++|||||+||+++....   +.-.+......-..+..-||+..++
T Consensus        75 ~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~  154 (161)
T cd07256          75 HNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGDYYTGDPDNPPIRWDVHDPQRQTWWGPPAPP  154 (161)
T ss_pred             HHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecCceeeCCCCCCcccCccccccccccccCCCC
Confidence              788889999999863  333332222345679999999999999975542   1111222222213445677777653

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=1.5e-17  Score=111.76  Aligned_cols=115  Identities=10%  Similarity=0.019  Sum_probs=82.2

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCEEeeec-CCCcce--EEEEeCCeeEEEeecCCCCcc--cCCCCCCcceEEEEeCCHHHH
Q 042945            9 VSFVSKSVEKSVMFYEQVLGFVMIKRP-SFNFEG--AWLFNHGIGIHLLESDKAPEK--RGKINPKDNHISFQCSDMKLV   83 (172)
Q Consensus         9 v~l~v~D~~~a~~FY~~~LG~~~~~~~-~~~~~~--~~~~~~~~~l~l~~~~~~~~~--~~~~~~g~~~v~~~v~dl~~~   83 (172)
                      -.|.|+|++++++||+++||++..... ......  ..+..++..+.+.........  .....++..+++|.|+|++++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~~   82 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDAH   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECCHHHH
Confidence            478999999999999999999998753 111111  123333444545433221111  012334567999999999999


Q ss_pred             HHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           84 MRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        84 ~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      ++++.++|+++..++... ++|.+.++++|||||+|+|.+|
T Consensus        83 ~~~l~~~G~~v~~~~~~~-~~g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          83 YERARAAGAEILREPTDT-PYGSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             HHHHHHCCCEEeeCcccc-CCCcEEEEEECCCCCEEEEecC
Confidence            999999999999877554 3567889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK10291 glyoxalase I; Provisional

Probab=99.78  E-value=6.9e-18  Score=114.73  Aligned_cols=115  Identities=18%  Similarity=0.241  Sum_probs=78.3

Q ss_pred             EEEeCCHHHHHHHHHHhhCCEEeeecCCC---cceEEEEeCC----eeEEEeecCCCCcccCCCCCCcceEEEEeCCHHH
Q 042945           10 SFVSKSVEKSVMFYEQVLGFVMIKRPSFN---FEGAWLFNHG----IGIHLLESDKAPEKRGKINPKDNHISFQCSDMKL   82 (172)
Q Consensus        10 ~l~v~D~~~a~~FY~~~LG~~~~~~~~~~---~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~   82 (172)
                      .|.|+|+++|++||+++||++...+....   ....++..++    ..+++....  +..+...+.+..|+||.|+|+++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~g~~~~hlaf~V~d~~~   78 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW--GVDKYELGTAYGHIALSVDNAAE   78 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecC--CCCCCcCCCCeeEEEEEeCCHHH
Confidence            37899999999999999999987653221   1233332221    113333211  11112234467899999999999


Q ss_pred             HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           83 VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        83 ~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      ++++|+++|+++..++....+.+.+.+|++|||||.|||++...
T Consensus        79 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         79 ACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             HHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            99999999999886554332222456889999999999998653

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.78  E-value=7.2e-18  Score=113.28  Aligned_cols=113  Identities=16%  Similarity=0.151  Sum_probs=80.5

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC---CH
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS---DM   80 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~---dl   80 (172)
                      ++|.||.|.|+|+++|++||+++|||+...+..  ....|+...+..+.+.-....       ..+..|++|.++   |+
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~f~v~~~~dl   71 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPE--DGALYLRMDDRAWRIAVHPGE-------ADDLAYAGWEVADEAAL   71 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCC--CCeEEEEccCCceEEEEEeCC-------CCceeEEEEEECCHHHH
Confidence            478999999999999999999999999876532  234444433333322221111       235679999997   59


Q ss_pred             HHHHHHHHhCCCeEeeceeec--CCeeEEEEEEECCCCCEEEEEeec
Q 042945           81 KLVMRKLEEMNIEYETAVVDE--GGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        81 ~~~~~~l~~~G~~i~~~~~~~--~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      ++++++|.++|+++...+...  ...+.+.+|++|||||.||++...
T Consensus        72 ~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          72 DALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence            999999999999988644211  111237899999999999999754

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.78  E-value=6.2e-18  Score=114.35  Aligned_cols=110  Identities=18%  Similarity=0.330  Sum_probs=80.3

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCee--EEEeecCCCCcccCCCCCCcceEEEEeCC
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG--IHLLESDKAPEKRGKINPKDNHISFQCSD   79 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~--l~l~~~~~~~~~~~~~~~g~~~v~~~v~d   79 (172)
                      ++.+|.||+|.|+|+++|.+||+++|||++..+.   ....|+..++..  +.+....          ++..|++|+|++
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~---~~~~~l~~~~~~~~i~l~~~~----------~~~~~iaf~v~~   69 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERT---AKATYFRSDARDHTLVYIEGD----------PAEQASGFELRD   69 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCC---CCeEEEEcCCccEEEEEEeCC----------CceEEEEEEECC
Confidence            5689999999999999999999999999986542   124454433222  2222111          245789999975


Q ss_pred             ---HHHHHHHHHhCCCeEeeceeecC--CeeEEEEEEECCCCCEEEEEee
Q 042945           80 ---MKLVMRKLEEMNIEYETAVVDEG--GIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        80 ---l~~~~~~l~~~G~~i~~~~~~~~--~~g~~~~~~~DPdG~~iei~~~  124 (172)
                         +++++++|.++|+++...+....  ..+.+++||+|||||.||+...
T Consensus        70 ~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~  119 (124)
T cd08361          70 DDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVR  119 (124)
T ss_pred             HHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEe
Confidence               99999999999999876543211  1234678999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.78  E-value=5.6e-18  Score=114.29  Aligned_cols=118  Identities=21%  Similarity=0.322  Sum_probs=84.8

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC----cceEEEEeCCeeEEEeecCCCCccc----CCCCCCcceEEEEe
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN----FEGAWLFNHGIGIHLLESDKAPEKR----GKINPKDNHISFQC   77 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~~----~~~~~g~~~v~~~v   77 (172)
                      |+||.|.|+|++++.+||+++||++........    ....++..++..+++++........    ....++..|++|.|
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v   80 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEV   80 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEe
Confidence            579999999999999999999999997654321    1234444456677777654321111    12356778999999


Q ss_pred             CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCC--CCEEEEEe
Q 042945           78 SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPD--GYMIEICN  123 (172)
Q Consensus        78 ~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPd--G~~iei~~  123 (172)
                      +|++++++++.+.|+++..++......|...+++.||+  |+.|||++
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          81 DDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            99999999999999999887753333343444444445  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.78  E-value=1.5e-17  Score=115.37  Aligned_cols=113  Identities=27%  Similarity=0.385  Sum_probs=81.9

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCee--EEEeecCCCCcccCCCCCCcceEEEEeCCHH
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG--IHLLESDKAPEKRGKINPKDNHISFQCSDMK   81 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~--l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~   81 (172)
                      .+|+|+.|.|.|+++|++||+++||++......  ....|+..+...  +.+...         ..++..|++|.|+|++
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~~~~~l~~~~~~~~~~l~~~---------~~~~~~hiaf~v~d~~   71 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--DQMAFLRCNSDHHSIAIARG---------PHPSLNHVAFEMPSID   71 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--CeEEEEECCCCcceEEEccC---------CCCceEEEEEECCCHH
Confidence            479999999999999999999999999865421  123444333222  222211         1246789999999888


Q ss_pred             HHH---HHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           82 LVM---RKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        82 ~~~---~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      ++.   ++|+++|+++...+......+.+.+||+||+||.|||++....
T Consensus        72 ~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~~  120 (144)
T cd07239          72 EVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELEQ  120 (144)
T ss_pred             HHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCceE
Confidence            775   8999999998876544333234668999999999999987554

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.78  E-value=2.6e-17  Score=112.38  Aligned_cols=116  Identities=26%  Similarity=0.361  Sum_probs=82.7

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC---CeeEEEeecCCCCcccCCCCCCcceEEEEeCCHH
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH---GIGIHLLESDKAPEKRGKINPKDNHISFQCSDMK   81 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~   81 (172)
                      +|+|+.|.|.|++++++||+++||++.....+. ....++...   +..+.+........  .....+..|++|.|+|++
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~h~~f~v~~~~   77 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL-GGLVFLSRDPDEHHQIALITGRPAAP--PPGPAGLNHIAFEVDSLD   77 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC-CcEEEEEecCCCceEEEEEecCCCCC--CCCCCCceEEEEEeCCHH
Confidence            589999999999999999999999998765421 133444332   23455554432211  122346689999998755


Q ss_pred             ---HHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           82 ---LVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        82 ---~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                         +++++|.+.|+++...+..  + +.+.+|++||+||.|||++..+
T Consensus        78 ~v~~~~~~l~~~G~~~~~~~~~--~-~~~~~~~~DP~G~~ie~~~~~~  122 (134)
T cd08348          78 DLRDLYERLRAAGITPVWPVDH--G-NAWSIYFRDPDGNRLELFVDTP  122 (134)
T ss_pred             HHHHHHHHHHHCCCCccccCCC--C-ceeEEEEECCCCCEEEEEEcCC
Confidence               5889999999988765422  2 2478999999999999997554

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=2.2e-17  Score=110.41  Aligned_cols=112  Identities=14%  Similarity=0.258  Sum_probs=80.2

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC--eeEEEeecCCCCc--ccCCCCCCcceEEEEeCCHHHH
Q 042945            8 HVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG--IGIHLLESDKAPE--KRGKINPKDNHISFQCSDMKLV   83 (172)
Q Consensus         8 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~~l~l~~~~~~~~--~~~~~~~g~~~v~~~v~dl~~~   83 (172)
                      +..|.|+|+++|++||+++||++.....+   ....+...+  ..+.+........  ......+...|++|.|+|++++
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~did~~   80 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD---WYVSLRSPDGGVELAFMLPGHETVPAAQYQFQGQGLILNFEVDDVDAE   80 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC---cEEEEecCCCceEEEEccCCCCCCcchhcccCCceEEEEEEECCHHHH
Confidence            57899999999999999999999886521   122222222  2344443322211  1112233446999999999999


Q ss_pred             HHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           84 MRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        84 ~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      +++|.++|+++..++... ++|.+.++++||+||+|||++
T Consensus        81 ~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          81 YERLKAEGLPIVLPLRDE-PWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHHhcCCCeeeccccC-CCcceEEEEECCCCCEEEEEC
Confidence            999999999988766543 456789999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.77  E-value=1.7e-17  Score=111.45  Aligned_cols=114  Identities=17%  Similarity=0.230  Sum_probs=77.7

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC-CeeEEEeecCCC---CcccCCCCCCcceEEEEeC---
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH-GIGIHLLESDKA---PEKRGKINPKDNHISFQCS---   78 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~~l~l~~~~~~---~~~~~~~~~g~~~v~~~v~---   78 (172)
                      ++||.|.|+|+++|++||+. |||+....... .....+... +..+.+......   ........++..+++|.++   
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~-~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~   78 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD-EPHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCETPA   78 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC-CCcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcCCHH
Confidence            57999999999999999975 99997654321 112222222 344443322110   0001112334568888875   


Q ss_pred             CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEE
Q 042945           79 DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC  122 (172)
Q Consensus        79 dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~  122 (172)
                      |+++++++|+++|+++..+|.. .+||.+.++++|||||+|||+
T Consensus        79 dvd~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          79 EVDALYAELVGAGYPGHKEPWD-APWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             HHHHHHHHHHHCCCCcCCCCcc-CCCCCEEEEEECCCCCEEEEe
Confidence            8999999999999998876654 346778899999999999997

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.77  E-value=2e-17  Score=110.00  Aligned_cols=111  Identities=22%  Similarity=0.329  Sum_probs=82.8

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC-CeeEEEeecCCCCcccCCCCCCcceEEEEeC---C
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH-GIGIHLLESDKAPEKRGKINPKDNHISFQCS---D   79 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~---d   79 (172)
                      ++|+|+.|.|.|++++++||+++||+++....   ....|+... +..+.+.-....       ..+..|++|.|+   +
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-------~~~~~h~~~~v~~~~~   70 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRD---AGSVYLRCSEDDHHSLVLTEGD-------EPGVDALGFEVASEED   70 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeec---CCeEEEecCCCCcEEEEEEeCC-------CCCceeEEEEcCCHHH
Confidence            47999999999999999999999999998763   234455443 222222211111       235689999997   7


Q ss_pred             HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           80 MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      +++++++++++|+++...+.... ++.+.+|+.||+||.+|++...
T Consensus        71 v~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          71 LEALAAHLEAAGVAPEEASDPEP-GVGRGLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             HHHHHHHHHHcCCceEEcCccCC-CCceEEEEECCCCCEEEEEEcc
Confidence            89999999999999887664322 3458899999999999999753

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.77  E-value=1.5e-17  Score=114.89  Aligned_cols=114  Identities=16%  Similarity=0.136  Sum_probs=82.8

Q ss_pred             ceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC-eeEEEeecCCCCcccCCCCCCcceEEEEeCC---HHH
Q 042945            7 NHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG-IGIHLLESDKAPEKRGKINPKDNHISFQCSD---MKL   82 (172)
Q Consensus         7 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d---l~~   82 (172)
                      .||.|.|+|++++.+||+++|||++..+..  ....|+...+ ...+.+....      ...++..|++|.|+|   +++
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~--~~~~~l~~~~~~~~h~~~~~~------~~~~gl~Hiaf~v~~~~~v~~   72 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE--DRIVFMRCHPNPFHHTFAVGP------ASSSHFHHVNFMVTDIDDIGK   72 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC--CEEEEEEcCCCCCcceeeecc------CCCCceEEEEEECCCHHHHHH
Confidence            599999999999999999999999876632  2334443322 2223332111      124578999999975   567


Q ss_pred             HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCC
Q 042945           83 VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLP  128 (172)
Q Consensus        83 ~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~  128 (172)
                      ++++|.++|+++...|......+.+.+|++||+|+.|||+......
T Consensus        73 ~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~  118 (141)
T cd07258          73 ALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGMEEF  118 (141)
T ss_pred             HHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCccee
Confidence            7999999999988766554433457899999999999999866543

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.77  E-value=1.2e-17  Score=112.08  Aligned_cols=114  Identities=28%  Similarity=0.307  Sum_probs=81.0

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC--CeeEEEeecCCCCcccCCCCCCcceEEEEe--
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH--GIGIHLLESDKAPEKRGKINPKDNHISFQC--   77 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v--   77 (172)
                      +++++.|+.|.|.|++++++||+++||+++....+   ...++...  +....+.... .      ..++..|++|.|  
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~------~~~~~~hi~~~v~~   70 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD---DRIYLRGLEEFIHHSLVLTK-A------PVAGLGHIAFRVRS   70 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC---CeEEEEecCCCceEEEEEee-C------CCCceeEEEEECCC
Confidence            36899999999999999999999999999876531   23333211  1222222111 1      124678999999  


Q ss_pred             -CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           78 -SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        78 -~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                       +|+++++++|+++|+++...|........+++|+.|||||.||++...
T Consensus        71 ~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          71 EEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             HHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEecc
Confidence             489999999999999987654332222237899999999999999743

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.77  E-value=3.3e-17  Score=108.11  Aligned_cols=109  Identities=19%  Similarity=0.271  Sum_probs=80.6

Q ss_pred             EEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHHHHHHHHh
Q 042945           10 SFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEE   89 (172)
Q Consensus        10 ~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~~~~l~~   89 (172)
                      .|.|+|++++++||+++||++...... +....++..++..+++........   ....+..|++|.++|++++++++.+
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~   78 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP-EPGYAFLSRGGAQLMLSEHDGDEP---VPLGRGGSVYIEVEDVDALYAELKA   78 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC-CCcEEEEEeCCEEEEEeccCCCCC---CCCCCcEEEEEEeCCHHHHHHHHHH
Confidence            689999999999999999999877642 122333444556666655432211   1234567999999999999999999


Q ss_pred             CCCe-EeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           90 MNIE-YETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        90 ~G~~-i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      +|++ +..++.. .+++.+.++++||+|+.|||+|
T Consensus        79 ~G~~~~~~~~~~-~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          79 KGADLIVYPPED-QPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             cCCcceecCccC-CCcccEEEEEECCCCCEEEecC
Confidence            9998 5555543 3456688999999999999985

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.77  E-value=1.8e-17  Score=109.76  Aligned_cols=108  Identities=27%  Similarity=0.483  Sum_probs=78.5

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC--CHHHHHH
Q 042945            8 HVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS--DMKLVMR   85 (172)
Q Consensus         8 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~--dl~~~~~   85 (172)
                      ||.|.|+|++++++||+++||++...+.+   ...++...+..+.+.......   . ...+..|++|.|+  +++++++
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~---~-~~~~~~hiaf~v~~~d~~~~~~   73 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS---KEAYFELAGLWICLMEEDSLQ---G-PERTYTHIAFQIQSEEFDEYTE   73 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC---ceeEEEecCeEEEeccCCCcC---C-CCCCccEEEEEcCHHHHHHHHH
Confidence            89999999999999999999999876532   233443344555443322111   1 2345679999994  8999999


Q ss_pred             HHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           86 KLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        86 ~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      ++.++|+++...... ..++.+.+|++|||||+|||+.
T Consensus        74 ~l~~~G~~~~~~~~~-~~~~~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          74 RLKALGVEMKPERPR-VQGEGRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             HHHHcCCccCCCccc-cCCCceEEEEECCCCCEEEEEe
Confidence            999999998754322 2223478999999999999985

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=6.1e-17  Score=108.39  Aligned_cols=114  Identities=11%  Similarity=0.010  Sum_probs=82.5

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCEEeeecC-CCcc--eEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHHHHH
Q 042945            9 VSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFE--GAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMR   85 (172)
Q Consensus         9 v~l~v~D~~~a~~FY~~~LG~~~~~~~~-~~~~--~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~~~   85 (172)
                      +.|.|+|++++.+||+++||++...... ....  ...+..++..+.+...............+..|++|.|+|++++++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~   84 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHGSPASWGGTPVSLHLYVEDVDATFA   84 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccCCCCCCCCceEEEEEEeCCHHHHHH
Confidence            5689999999999999999999876532 1121  122333455565554322111111224456799999999999999


Q ss_pred             HHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           86 KLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        86 ~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      ++.+.|+++..++... ++|.+.++++||+||.|+|++
T Consensus        85 ~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          85 RAVAAGATSVMPPADQ-FWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHCCCeEecCcccc-cccceEEEEECCCCCEEEEec
Confidence            9999999998877533 456789999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.76  E-value=2.9e-17  Score=110.42  Aligned_cols=108  Identities=25%  Similarity=0.404  Sum_probs=79.6

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEe--CCHHH
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQC--SDMKL   82 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v--~dl~~   82 (172)
                      +|+|+.|.|+|++++.+||+++||++.....+   ...++..++..+.+......     ...++..|++|.+  +|+++
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~---~~~~~~~~~~~~~l~~~~~~-----~~~~~~~hi~f~v~~~dl~~   72 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD---KGAYLEAGDLWLCLSVDANV-----GPAKDYTHYAFSVSEEDFAS   72 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC---CceEEecCCEEEEEecCCCC-----CCCCCeeeEEEEeCHHHHHH
Confidence            58999999999999999999999999876531   23444444444433221111     1234568999988  58999


Q ss_pred             HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           83 VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        83 ~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      ++++++++|+++..++.. .   .+.+||+|||||.|||+..
T Consensus        73 ~~~~l~~~G~~~~~~~~~-~---~~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          73 LKEKLRQAGVKEWKENTS-E---GDSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             HHHHHHHcCCcccCCCCC-C---ccEEEEECCCCCEEEEEeC
Confidence            999999999998764432 1   2679999999999999964

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.76  E-value=7.3e-17  Score=109.97  Aligned_cols=114  Identities=24%  Similarity=0.319  Sum_probs=81.1

Q ss_pred             ceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC--cceEEEEeCCee--EEEeecCCCCcccCCCCCCcceEEEEeCCHH-
Q 042945            7 NHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN--FEGAWLFNHGIG--IHLLESDKAPEKRGKINPKDNHISFQCSDMK-   81 (172)
Q Consensus         7 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~~--l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~-   81 (172)
                      +||.|.|+|++++++||+++||++........  ....|+..++..  +.+....        ..++..|++|.|+|++ 
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~~hl~~~v~d~~~   72 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDPGVDAAAFLRCDEDHHDLALFPGP--------ERPGLHHVAFEVESLDD   72 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccCCceeEEEEEcCCCcceEEEEcCC--------CCCCeeEEEEEcCCHHH
Confidence            59999999999999999999999987653211  123344333222  2222211        1446789999999764 


Q ss_pred             --HHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCC
Q 042945           82 --LVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLP  128 (172)
Q Consensus        82 --~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~  128 (172)
                        +++++|+++|+++...+......+.++++++||+||+|||.+..+..
T Consensus        73 ~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~~~  121 (131)
T cd08343          73 ILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMYRI  121 (131)
T ss_pred             HHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCccc
Confidence              78899999999988766543322347899999999999999865543

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=2.4e-17  Score=111.24  Aligned_cols=114  Identities=23%  Similarity=0.242  Sum_probs=78.2

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEe-CCeeEEEeecCCC----C-cccCCCCCCcceEEEEeC-
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFN-HGIGIHLLESDKA----P-EKRGKINPKDNHISFQCS-   78 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~----~-~~~~~~~~g~~~v~~~v~-   78 (172)
                      +.++.|.|+|+++|++||+. |||+...+.... ...++.. ++..+++......    . ........+..|++|.|+ 
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~-~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~v~~   78 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDE-KAACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLSADS   78 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCC-CeEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEeCCC
Confidence            35799999999999999987 899976432211 2233323 3445555543210    0 000012334569999997 


Q ss_pred             --CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           79 --DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        79 --dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                        ++++++++++++|+++..+|.... + .+.+|++|||||+|||+.
T Consensus        79 ~~~vd~~~~~l~~~G~~i~~~p~~~~-~-~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          79 REEVDELVEKALAAGGKEFREPQDHG-F-MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             HHHHHHHHHHHHHCCCcccCCcccCC-c-eEEEEEECCCCCEEEEEE
Confidence              688999999999999988765443 3 367899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.75  E-value=4.4e-17  Score=106.97  Aligned_cols=103  Identities=26%  Similarity=0.415  Sum_probs=74.5

Q ss_pred             EEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCe-----eEEEeecCCCCcccCCCCCCcceEEEEeCCHHHHHH
Q 042945           11 FVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGI-----GIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMR   85 (172)
Q Consensus        11 l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-----~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~~~   85 (172)
                      |.|+|++++++||+++||++.....+   ....+.. +.     ...+.....    ......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP---DYVDFSL-GFRFHDGVIEFLQFPD----PPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET---SEEEEEE-TEEEEEEEEEEEEEES----SSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC---CeEEEEe-ccchhhhhHHHccCCc----cccCCCceeEEEEEEcCHHHHHH
Confidence            68999999999999999999998532   1222222 21     122332221    11224467899999999999999


Q ss_pred             HHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEE
Q 042945           86 KLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC  122 (172)
Q Consensus        86 ~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~  122 (172)
                      ++++.|+++..+|.... +|.+.+++.|||||+|||+
T Consensus        73 ~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDP-WGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEET-TSEEEEEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcC-CCeEEEEEECCCCCEEEeC
Confidence            99999999988776643 4668999999999999986

...

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.75  E-value=7.2e-17  Score=108.31  Aligned_cols=108  Identities=14%  Similarity=0.207  Sum_probs=78.0

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHHHHHHH
Q 042945            8 HVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMRKL   87 (172)
Q Consensus         8 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~~~~l   87 (172)
                      ...|.|+|+++|++||++ |||+...+.+.  ...++..++..+++.......     ......|++|.|+|+++++++|
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~--~~~~~~~~~~~l~l~~~~~~~-----~~~~~~~~~~~v~dvd~~~~~l   76 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA--GYMILRRGDLELHFFAHPDLD-----PATSPFGCCLRLPDVAALHAEF   76 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC--CEEEEEcCCEEEEEEecCcCC-----CCCCcceEEEEeCCHHHHHHHH
Confidence            367999999999999999 99998765421  222333455567776543111     1123468999999999999999


Q ss_pred             HhCCCeEe-------eceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           88 EEMNIEYE-------TAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        88 ~~~G~~i~-------~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +++|+++.       .++. ..++|.+.++++|||||+|||.+.
T Consensus        77 ~~~G~~~~~~~~~~~~~~~-~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          77 RAAGLPETGSGIPRITPPE-DQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHhCccccccCCCcccCCc-CCCCceeEEEEECCCCCEEEeecC
Confidence            99999853       2222 223577899999999999999873

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=6.8e-17  Score=108.68  Aligned_cols=114  Identities=16%  Similarity=0.193  Sum_probs=74.6

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEE--eecCCCC---cccCCCCCCcceEE--EEeCCH
Q 042945            8 HVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHL--LESDKAP---EKRGKINPKDNHIS--FQCSDM   80 (172)
Q Consensus         8 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l--~~~~~~~---~~~~~~~~g~~~v~--~~v~dl   80 (172)
                      ||.|.|+|+++|++||+++||+++....+   ....+...+..+.+  .......   ........+..|++  +.++|+
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~dv   78 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE---TWVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSEEEF   78 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC---CcccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeHHHH
Confidence            89999999999999999999999865421   11111112333322  2211110   00011122345665  566899


Q ss_pred             HHHHHHHHhCCCeEeeceeec---CCeeEEEEEEECCCCCEEEEEee
Q 042945           81 KLVMRKLEEMNIEYETAVVDE---GGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        81 ~~~~~~l~~~G~~i~~~~~~~---~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      ++++++|+++|+++..+|...   ..++.+.+|++|||||.|||..+
T Consensus        79 ~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  125 (125)
T cd08357          79 DALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKAF  125 (125)
T ss_pred             HHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEeeC
Confidence            999999999999998766432   12345889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=1e-16  Score=107.37  Aligned_cols=114  Identities=20%  Similarity=0.337  Sum_probs=81.4

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC-eeEEEeecCCCCc----ccCCCCCCcceEEEEe--C
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG-IGIHLLESDKAPE----KRGKINPKDNHISFQC--S   78 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~-~~l~l~~~~~~~~----~~~~~~~g~~~v~~~v--~   78 (172)
                      |.++.|.|.|++++++||+++|||+...+.  +....++..++ ..+.++.......    .......+..|++|.+  +
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~--~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~   78 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKE--DRRLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAIPAE   78 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecC--CCceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEcCHH
Confidence            468999999999999999999999988642  12233343333 4455554332110    0111234667999988  5


Q ss_pred             CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           79 DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        79 dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      |++++++++.++|+++...+.  ..++.+.+|++||+||+||+++
T Consensus        79 dl~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~DP~G~~ie~~~  121 (122)
T cd08354          79 ELAEWEAHLEAKGVAIESEVQ--WPRGGRSLYFRDPDGNLLELAT  121 (122)
T ss_pred             HHHHHHHHHHhcCCceecccc--CCCCeeEEEEECCCCCEEEEec
Confidence            899999999999998876553  2234588999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.75  E-value=5e-17  Score=125.57  Aligned_cols=117  Identities=19%  Similarity=0.297  Sum_probs=79.4

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC-Cc---ceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF-NF---EGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~---~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      |.+++|+||.|.|+|++++++||+++|||+...+... ..   ...|+.... ..+.+....     ....++..|+||.
T Consensus       141 ~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~g~~~Hiaf~  214 (303)
T TIGR03211       141 VGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSN-KAHDIAFVG-----DPEPGKLHHVSFF  214 (303)
T ss_pred             cCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCC-CCcccceec-----CCCCCceEEEEEE
Confidence            4578899999999999999999999999998654211 11   122332221 111111000     0112237899999


Q ss_pred             eCC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           77 CSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        77 v~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      |+|   ++++.++|+++|+++..+|......+.+++|++||+||+||++.
T Consensus       215 v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       215 LDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             cCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence            986   55578899999999887665433222478999999999999984

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=9.8e-17  Score=106.49  Aligned_cols=108  Identities=14%  Similarity=0.231  Sum_probs=79.6

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEE-eCCeeEEEeecCCCCcccCCCCCCcceEEEEeCC---HHHHH
Q 042945            9 VSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF-NHGIGIHLLESDKAPEKRGKINPKDNHISFQCSD---MKLVM   84 (172)
Q Consensus         9 v~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d---l~~~~   84 (172)
                      +.|.|+|+++|++||+++||++......   ....+. .++..+.++........ ....++..|++|.+++   +++++
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~   77 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP---TFALFVLGSGVKLGLWSRHTVEPA-SDATGGGSELAFMVDDGAAVDALY   77 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC---ceEEEEeCCCcEEEEeeccccCCC-CCCCCCceEEEEEcCCHHHHHHHH
Confidence            6799999999999999999999775421   122222 24455666654432211 1224567899999975   89999


Q ss_pred             HHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEE
Q 042945           85 RKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC  122 (172)
Q Consensus        85 ~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~  122 (172)
                      +++.++|+++..++... ++| +.++|+|||||.||++
T Consensus        78 ~~~~~~g~~v~~~~~~~-~~g-~~~~~~DPdGn~ie~~  113 (114)
T cd07261          78 AEWQAKGVKIIQEPTEM-DFG-YTFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHCCCeEecCcccc-CCc-cEEEEECCCCCEEEee
Confidence            99999999999877654 455 6799999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=1e-16  Score=106.68  Aligned_cols=104  Identities=15%  Similarity=0.225  Sum_probs=76.2

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHHHHHHHH
Q 042945            9 VSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMRKLE   88 (172)
Q Consensus         9 v~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~~~~l~   88 (172)
                      ..|.|+|+++|++||++ |||+...+.   ....++..++..+.+.......      ..+..+++|.|+|+++++++|+
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~---~~~~~l~~~~~~l~l~~~~~~~------~~~~~~~~~~v~did~~~~~l~   74 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEN---DNLAYFRLGNCAFYLQDYYVKD------WAENSMLHLEVDDLEAYYEHIK   74 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecC---CCEEEEEcCCEEEEeecCCCcc------cccCCEEEEEECCHHHHHHHHH
Confidence            56889999999999988 999998763   2345555555566554322111      1234689999999999999999


Q ss_pred             hCCCeEee-----ceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           89 EMNIEYET-----AVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        89 ~~G~~i~~-----~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      ++|+++..     ++.. ..+|.+.++++|||||+|+|.+
T Consensus        75 ~~G~~~~~~~~~~~~~~-~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          75 ALGLPKKFPGVKLPPIT-QPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HcCCcccccceecCccc-cCCCcEEEEEECCCccEEEeeC
Confidence            99987532     2222 2456799999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.74  E-value=1e-16  Score=123.22  Aligned_cols=145  Identities=23%  Similarity=0.367  Sum_probs=91.1

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC-c--ceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN-F--EGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS   78 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~--~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~   78 (172)
                      .+++|+||+|.|.|++++.+||+++||++...+.... .  ...|....+ ..+.+...      ....++.+|+||.|+
T Consensus       133 ~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~Hiaf~v~  205 (294)
T TIGR02295       133 SPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKG-GVHDIALT------NGNGPRLHHIAYWVH  205 (294)
T ss_pred             cceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCC-CcCceEee------cCCCCceeeEEEEcC
Confidence            4578999999999999999999999999987653111 1  122222211 11111111      011357789999999


Q ss_pred             C---HHHHHHHHHhCCCe--EeeceeecCCeeEEEEEEECCCCCEEEEEeecCC---CCCCCCCCCCCCccccccccccc
Q 042945           79 D---MKLVMRKLEEMNIE--YETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL---PVLPLSSCPLKLPSKRSSEKAAC  150 (172)
Q Consensus        79 d---l~~~~~~l~~~G~~--i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  150 (172)
                      |   ++++.++|+++|++  +...|......+.+++|++||+||+||+++....   +.-++............-||+..
T Consensus       206 d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~wg~~~  285 (294)
T TIGR02295       206 DPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGDYLTGDPDWPPIRWTLDDPQRQTLWGHPA  285 (294)
T ss_pred             CHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEeccceecCCcCCccccccccCCcccccCCCC
Confidence            8   55678999999987  5544533221134679999999999999985432   11122222222234556688876


Q ss_pred             chH
Q 042945          151 SGE  153 (172)
Q Consensus       151 ~~~  153 (172)
                      |..
T Consensus       286 ~~~  288 (294)
T TIGR02295       286 PPS  288 (294)
T ss_pred             CcC
Confidence            643

The enzyme from Bacillus brevis contains manganese.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=1.8e-16  Score=106.61  Aligned_cols=112  Identities=17%  Similarity=0.193  Sum_probs=78.3

Q ss_pred             eceEEEEeCCHHHHHHHHHHh---hCCEEeeecCCCcceEEEEeC--CeeEEEeecCCCCcccCCCCCCcceEEEEeCC-
Q 042945            6 LNHVSFVSKSVEKSVMFYEQV---LGFVMIKRPSFNFEGAWLFNH--GIGIHLLESDKAPEKRGKINPKDNHISFQCSD-   79 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~---LG~~~~~~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d-   79 (172)
                      |+|+.|.|+|+++|++||+++   ||++...+.. + ....+...  +..+.+.......  . ....+..|++|.|++ 
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~~~~--~-~~~~~~~hi~f~v~~~   75 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG-P-GAVGYGKGGGGPDFWVTKPFDGE--P-ATAGNGTHVAFAAPSR   75 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC-C-ceeEeccCCCCceEEEeccccCC--C-CCCCCceEEEEECCCH
Confidence            589999999999999999999   5898875531 1 12222222  3445554432111  1 112345799999986 


Q ss_pred             --HHHHHHHHHhCCCeEeeceeecCC--eeEEEEEEECCCCCEEEEE
Q 042945           80 --MKLVMRKLEEMNIEYETAVVDEGG--IQVDQLFFHDPDGYMIEIC  122 (172)
Q Consensus        80 --l~~~~~~l~~~G~~i~~~~~~~~~--~g~~~~~~~DPdG~~iei~  122 (172)
                        ++++++++.++|+.+...|.....  .+.+.+|++|||||.|||+
T Consensus        76 ~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          76 EAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             HHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence              788999999999998876654432  2346799999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=1.6e-16  Score=105.18  Aligned_cols=106  Identities=17%  Similarity=0.221  Sum_probs=76.6

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC---CeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHHHH
Q 042945            8 HVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH---GIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVM   84 (172)
Q Consensus         8 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~~   84 (172)
                      +..|.|+|++++++||+++||++.....  + ...+....   +..+.+......       .....|++|.|+|+++++
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~~v~d~~~~~   72 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMDH--G-WIATFASPQNMTVQVSLATEGGT-------ATVVPDLSIEVDDVDAAL   72 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEcC--C-ceEEEeecCCCCcEEEEecCCCC-------CCCCCEEEEEeCCHHHHH
Confidence            3578999999999999999999986431  1 22222221   223333322111       123469999999999999


Q ss_pred             HHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           85 RKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        85 ~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      ++|+++|+++..++... .+|.+.+|+.||+||.|+|++.
T Consensus        73 ~~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          73 ARAVAAGFAIVYGPTDE-PWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHhcCCeEecCCccC-CCceEEEEEECCCCCEEEEEEc
Confidence            99999999988766543 3566889999999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=2.7e-16  Score=105.36  Aligned_cols=112  Identities=17%  Similarity=0.226  Sum_probs=78.2

Q ss_pred             ceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCC---HHHH
Q 042945            7 NHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSD---MKLV   83 (172)
Q Consensus         7 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d---l~~~   83 (172)
                      .|+.|.|+|++++.+||+++||++...+.+  ....|... +..+.+........    ..++..|++|.|++   ++++
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~h~~f~v~~~~dl~~~   75 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--DYAKFLLE-DPRLNFVLNERPGA----PGGGLNHLGVQVDSAEEVAEA   75 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--CeeEEEec-CCceEEEEecCCCC----CCCCeeEEEEEeCCHHHHHHH
Confidence            489999999999999999999998765532  22233322 22333322211111    11467899999987   8899


Q ss_pred             HHHHHhCCCeEeeceeecCC-eeEEEEEEECCCCCEEEEEeec
Q 042945           84 MRKLEEMNIEYETAVVDEGG-IQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        84 ~~~l~~~G~~i~~~~~~~~~-~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      +++|.++|+++...+....+ .+.+++|++||+||.|||+++.
T Consensus        76 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          76 KARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence            99999999998875532211 1246799999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.72  E-value=1.9e-16  Score=103.25  Aligned_cols=111  Identities=28%  Similarity=0.419  Sum_probs=83.2

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCEEeeecCC-CcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHHHHHH
Q 042945            8 HVSFVSKSVEKSVMFYEQVLGFVMIKRPSF-NFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMRK   86 (172)
Q Consensus         8 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~~~~   86 (172)
                      |+.+.|.|++++.+||+++||++....... .....++..++..+++.........  ....+..|++|.|+|+++++++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~   78 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLGGTRLELFEGDEPAPA--PSGGGGVHLAFEVDDVDAAYER   78 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecCCceEEEecCCCCCCc--ccCCCeeEEEEECCCHHHHHHH
Confidence            899999999999999999999998876431 1223333334566677665433211  2345668999999999999999


Q ss_pred             HHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEE
Q 042945           87 LEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI  121 (172)
Q Consensus        87 l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei  121 (172)
                      |.++|+.+..++.. ..++.+.+++.||+|+.|||
T Consensus        79 l~~~g~~~~~~~~~-~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          79 LKAAGVEVLGEPRE-EPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHcCCcccCCCcC-CCCCcEEEEEECCCCcEEeC
Confidence            99999998876642 22345889999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=3.6e-16  Score=105.78  Aligned_cols=108  Identities=14%  Similarity=0.196  Sum_probs=73.7

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcc----------e----EEEEe----CCeeEEEeecCCCCcccCC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFE----------G----AWLFN----HGIGIHLLESDKAPEKRGK   65 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~----------~----~~~~~----~~~~l~l~~~~~~~~~~~~   65 (172)
                      .++.|++|.|+|+++|++||+++|||+...+.+++..          +    .++..    .+..+++.......  +..
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~--~~~   78 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIG--DYE   78 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCC--CCC
Confidence            3689999999999999999999999998775433221          1    22321    12345555432221  112


Q ss_pred             CCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           66 INPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        66 ~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      .+.  .|++|.|++. ++.++|+++|+++...+.     +  .++++||||+.|||+.
T Consensus        79 ~g~--~~~hlav~~~-d~~~~l~~~Gv~~~~~~~-----~--~~fi~DPDG~~ie~~~  126 (127)
T cd08358          79 LGN--DFLGITIHSK-QAVSNAKKHNWPVTEVED-----G--VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCC--CEEEEEEECH-HHHHHHHHCCCceecCCC-----C--EEEEECCCCCEEEEec
Confidence            222  3677777776 556999999998886442     2  5899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.71  E-value=3.9e-16  Score=103.53  Aligned_cols=105  Identities=20%  Similarity=0.275  Sum_probs=72.4

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCe--eEEEeecCCCCcccCCCCCCcce--EEEEeCC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGI--GIHLLESDKAPEKRGKINPKDNH--ISFQCSD   79 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--~l~l~~~~~~~~~~~~~~~g~~~--v~~~v~d   79 (172)
                      .+|+||.|.|.|++++.+||+ .||++...+.+   ...+...++.  .+.+....         ..+..|  +++.++|
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~d   67 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYE-AFGLDVREEGD---GLELRTAGNDHRWARLLEGA---------RKRLAYLSFGIFEDD   67 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHH-HhCCcEEeecC---ceEEEecCCCceEEEeecCC---------CCceeeEEEEeEhhh
Confidence            368999999999999999998 69999875531   2222222212  12222111         112334  4555689


Q ss_pred             HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           80 MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +++++++|.++|+++...+..   ++.+.+||+||+||.|||...
T Consensus        68 ~~~~~~~l~~~Gi~~~~~~~~---~~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          68 FAAFARHLEAAGVALAAAPPG---ADPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             HHHHHHHHHHcCCceecCCCc---CCCCEEEEECCCCCEEEEecC
Confidence            999999999999998765422   233579999999999999964

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=6e-16  Score=103.38  Aligned_cols=112  Identities=16%  Similarity=0.200  Sum_probs=79.6

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCC----cccCCCCCCcceEEEEe---CCHH
Q 042945            9 VSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP----EKRGKINPKDNHISFQC---SDMK   81 (172)
Q Consensus         9 v~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~g~~~v~~~v---~dl~   81 (172)
                      |+|.|+|+++|.+||+++||+++..+.  .....++..++..++++......    ........+..+++|.+   +|++
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   79 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS--NDGVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEEEVD   79 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC--CCceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHHHHH
Confidence            789999999999999999999987652  12233444456666666533111    01111223445677665   5899


Q ss_pred             HHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           82 LVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        82 ~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      ++++++.+.|+++..++... ++|.+.++++||+||+|||.+
T Consensus        80 ~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          80 AVLARAAAAGATIVKPPQDV-FWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHHhCCCEEecCCccC-CCCceEEEEECCCCCEEEEee
Confidence            99999999999998766543 456788999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.69  E-value=9.9e-16  Score=117.47  Aligned_cols=116  Identities=16%  Similarity=0.265  Sum_probs=79.5

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC--C-c---ceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF--N-F---EGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~-~---~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      ..+|+||.|.|+|+++|.+||+++|||+...+...  + .   ...|+..++....+....      ....++.+|++|.
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~------~~~~~~~~Hiaf~  213 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAA------GPSEKRLNHLMLE  213 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEec------CCCCCceEEEEEE
Confidence            35899999999999999999999999998654211  1 1   133433322211111111      1124567899999


Q ss_pred             eCCHHH---HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           77 CSDMKL---VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        77 v~dl~~---~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      |+|+++   +.++|+++|+ +...+......+.+++|++||+|++||+.+..
T Consensus       214 v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~~  264 (286)
T TIGR03213       214 VDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWGA  264 (286)
T ss_pred             cCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecCc
Confidence            987776   8999999999 44444333323468899999999999999754

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.66  E-value=3.1e-15  Score=115.57  Aligned_cols=112  Identities=21%  Similarity=0.344  Sum_probs=82.0

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEe-C---CeeEEEeecCCCCcccCCCCCCcceEEEEeC
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFN-H---GIGIHLLESDKAPEKRGKINPKDNHISFQCS   78 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~---~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~   78 (172)
                      +++|+|+.|.|+|++++++||+++||+++..+..   ...++.. .   ...+.+...         ...+..|++|.|+
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~---------~~~g~~hiaf~v~   69 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDG---QRVYLKAWDEWDHYSVILTEA---------DTAGLDHMAFKVE   69 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC---ceEEEEeccccccceEeeccC---------CCCceeEEEEEeC
Confidence            5789999999999999999999999999876532   1223322 1   112222111         1246789999997


Q ss_pred             ---CHHHHHHHHHhCCCeEeeceee-cCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           79 ---DMKLVMRKLEEMNIEYETAVVD-EGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        79 ---dl~~~~~~l~~~G~~i~~~~~~-~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                         ++++++++|+++|+++...+.. ..+. .+.+|++|||||.|||++....
T Consensus        70 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~-g~~~~~~DPdG~~iEl~~~~~~  121 (303)
T TIGR03211        70 SEADLERLVKRLEAYGVGTGWIPAGELPGV-GRRVRFTLPSGHTMELYAEKEY  121 (303)
T ss_pred             CHHHHHHHHHHHHHcCCCeeeccCCCCCCc-ceEEEEECCCCCEEEEEEcccc
Confidence               8999999999999998765531 1233 3679999999999999986664

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.64  E-value=6.7e-15  Score=112.90  Aligned_cols=113  Identities=18%  Similarity=0.212  Sum_probs=81.0

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC--eeEEEeecCCCCcccCCCCCCcceEEEEeCC-
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG--IGIHLLESDKAPEKRGKINPKDNHISFQCSD-   79 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d-   79 (172)
                      +.+|.|+.|.|+|+++|++||+++||++...+.+  ....|+....  ..+.+....         ..+..|++|.|++ 
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~f~V~~~   69 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--NDALYLRLDSRAHRIAVHPGE---------SDDLAYAGWEVADE   69 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--CceEEEEcCCCceEEEEEECC---------cCCeeeEeeeeCCH
Confidence            4689999999999999999999999998765421  1223433332  223332211         1245789999997 


Q ss_pred             --HHHHHHHHHhCCCeEeeceee--cCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           80 --MKLVMRKLEEMNIEYETAVVD--EGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        80 --l~~~~~~l~~~G~~i~~~~~~--~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                        ++++.++|+++|+++...+..  ....+.+.++|+|||||.+|++....
T Consensus        70 ~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~  120 (286)
T TIGR03213        70 AGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAV  120 (286)
T ss_pred             HHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEccc
Confidence              899999999999998765421  11123478999999999999998544

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.64  E-value=6.3e-15  Score=113.33  Aligned_cols=111  Identities=24%  Similarity=0.241  Sum_probs=81.0

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC--CeeEEEeecCCCCcccCCCCCCcceEEEEeC--
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH--GIGIHLLESDKAPEKRGKINPKDNHISFQCS--   78 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~--   78 (172)
                      |++|+||.|.|+|++++++||+++||+++..+..   ...++...  .....+.... .      ...+..|++|.|+  
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~---~~~~~~~~~~~~~~~l~l~~-~------~~~~~~hiaf~v~~~   71 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK---EYIYLRGIEEFQHHSLVLTK-A------PSAALSYIGFRVSKE   71 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC---CeEEEeccCcCCceEEEeee-C------CCcCccEEEEEeCCH
Confidence            6789999999999999999999999999876531   23333221  1111111111 0      1235789999997  


Q ss_pred             -CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           79 -DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        79 -dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                       |+++++++|+++|+++...+..   .+.+.+||+|||||.|||++...
T Consensus        72 ~dl~~~~~~l~~~Gv~v~~~~~~---~~~~~~~~~DPdG~~iEl~~~~~  117 (294)
T TIGR02295        72 EDLDKAADFFQKLGHPVRLVRDG---GQPEALRVEDPFGYPIEFYFEME  117 (294)
T ss_pred             HHHHHHHHHHHhcCCcEEeecCC---CCceEEEEECCCCCEEEEEEchh
Confidence             8999999999999998764422   23488999999999999998654

The enzyme from Bacillus brevis contains manganese.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.62  E-value=4e-14  Score=94.73  Aligned_cols=116  Identities=16%  Similarity=0.171  Sum_probs=83.7

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEE-eCC--eeEEEeecCCCCcccCCCCCCcceEEEEeCC
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF-NHG--IGIHLLESDKAPEKRGKINPKDNHISFQCSD   79 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~--~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d   79 (172)
                      ...+.|..|.|.|++++++||+++||++.....+.+....... ..+  ..=.+.....     ...+.....+.|.|+|
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y~~f~~~~~~~gG~l~~~~~-----~~p~~~~~~iy~~v~d   81 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARPG-----SPPGGGGWVIYFAVDD   81 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceEEEEECCCccccceeccCCc-----CCCCCCCEEEEEecCC
Confidence            3568899999999999999999999999877643321122111 122  1111111111     1112455789999999


Q ss_pred             HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           80 MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +++..+|..++|.+++.++...++. .+.+.+.||+||+|.+++.
T Consensus        82 id~~l~rv~~~GG~V~~p~~~~p~~-G~~a~~~Dp~Gn~~~l~s~  125 (127)
T COG3324          82 IDATLERVVAAGGKVLRPKTEFPGG-GRIAHFVDPEGNRFGLWSP  125 (127)
T ss_pred             hHHHHHHHHhcCCeEEecccccCCc-eEEEEEECCCCCEEEEeec
Confidence            9999999999999999988877754 4789999999999999874

>PLN02300 lactoylglutathione lyase

Probab=99.60  E-value=4.3e-14  Score=108.52  Aligned_cols=120  Identities=14%  Similarity=0.178  Sum_probs=86.1

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC---CCcceEEEEeC----CeeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS---FNFEGAWLFNH----GIGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      .++.|+.|.|+|++++.+||+++||++......   ..+...++...    ...+++......  .....+++..|++|.
T Consensus       153 ~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~--~~~~~g~~~~~i~~~  230 (286)
T PLN02300        153 EPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGV--TEYTKGNAYAQIAIG  230 (286)
T ss_pred             CcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCC--CccccCCceeEEEEe
Confidence            468899999999999999999999999875422   11222222211    122343322111  111224567899999


Q ss_pred             eCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           77 CSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        77 v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      |+|++++++++.++|+++..+|...++.+.+.++++||||+.++|++..
T Consensus       231 v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~  279 (286)
T PLN02300        231 TDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNI  279 (286)
T ss_pred             cCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccc
Confidence            9999999999999999999887665544447789999999999999754

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.57  E-value=2.5e-14  Score=94.50  Aligned_cols=92  Identities=22%  Similarity=0.335  Sum_probs=70.6

Q ss_pred             ceEEEEeCCHHHHHHHHHHhhCCEEeeec---CCCcceEEEEeCC--eeEEEeecCCCCcccCCCCCCcceEEEEeCCHH
Q 042945            7 NHVSFVSKSVEKSVMFYEQVLGFVMIKRP---SFNFEGAWLFNHG--IGIHLLESDKAPEKRGKINPKDNHISFQCSDMK   81 (172)
Q Consensus         7 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~---~~~~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~   81 (172)
                      +||+|.|.|+++|++||+++||+......   .......++..++  ..++|+++..........+.|.+||||.|+|++
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D~d   80 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPLDRGGGGIHHIAFEVDDLD   80 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHHHHTSSEEEEEEEEESHHH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCcccccCCCCEEEEEEEeCCHH
Confidence            69999999999999999999999876542   2223344554444  578999977554222235778899999999999


Q ss_pred             HHHHHHHhCCCeEeece
Q 042945           82 LVMRKLEEMNIEYETAV   98 (172)
Q Consensus        82 ~~~~~l~~~G~~i~~~~   98 (172)
                      +..++|.++|+++...+
T Consensus        81 ~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   81 AAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHCCCEEcccC
Confidence            99999999999988765

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.56  E-value=7.7e-14  Score=91.44  Aligned_cols=119  Identities=23%  Similarity=0.253  Sum_probs=86.2

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCC-----CcccCCCCCCcceEEEEeC-
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKA-----PEKRGKINPKDNHISFQCS-   78 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-----~~~~~~~~~g~~~v~~~v~-   78 (172)
                      +.-.|+|.|+|+++|.+||+. |||+...+...+.....+...++.+.|++...-     .............+|+.+. 
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls~~s   81 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDEDAACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLSAGS   81 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCcccccceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEeccCc
Confidence            456789999999999999999 999987664333334444455666666664311     1111222445567888886 


Q ss_pred             --CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           79 --DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        79 --dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                        ++|++.++..+.|.++..++.+.+..  +...|.|||||.||+.+..+
T Consensus        82 ~eevd~~v~ka~eaGGk~~~~~~d~gfM--Yg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          82 REEVDELVDKALEAGGKPANEPQDEGFM--YGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCccccccc--cceeeeCCCCCeEEEEEeCH
Confidence              79999999999999998777665543  56788999999999998765

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.55  E-value=2.1e-13  Score=100.86  Aligned_cols=118  Identities=20%  Similarity=0.297  Sum_probs=88.6

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC---CH
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS---DM   80 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~---dl   80 (172)
                      +.+..+.|.|+|+++...||++++|+++..+.+   ..+-+..++..+..+...+....+.....|+.|++|-++   |+
T Consensus         9 ~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~---~~v~L~vgg~~LL~L~q~~~a~~~~~~~aGLyH~AfLlP~r~~L   85 (265)
T COG2514           9 TFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD---GSVTLGVGGTPLLTLEQFPDARRPPPRAAGLYHTAFLLPTREDL   85 (265)
T ss_pred             cEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC---ceEEEeeCCEEEEEEEeCCCCCCCCccccceeeeeeecCCHHHH
Confidence            568899999999999999999999999998742   334444455544444443333333456789999999998   67


Q ss_pred             HHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           81 KLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        81 ~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      ..+..++.+.|+++.. ..+.  +-.-.+|+.||+||-||++.+++.
T Consensus        86 ~~~l~hl~~~~~~l~G-a~DH--~vSEAlYl~DPEGNGIEiYaDrp~  129 (265)
T COG2514          86 ARVLNHLAEEGIPLVG-ASDH--LVSEALYLEDPEGNGIEIYADRPR  129 (265)
T ss_pred             HHHHHHHHhcCCcccc-cCcc--hhheeeeecCCCCCeEEEEecCCh
Confidence            7888899999999873 2222  223679999999999999988664

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.48  E-value=1.5e-12  Score=88.85  Aligned_cols=119  Identities=24%  Similarity=0.412  Sum_probs=81.1

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC----------------------cceEEEEeCCeeEEEeecC---C
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN----------------------FEGAWLFNHGIGIHLLESD---K   58 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~----------------------~~~~~~~~~~~~l~l~~~~---~   58 (172)
                      ..+.|..+++.|+.+|..||.+++|+.+....++.                      ....|.......+++..+-   .
T Consensus        21 ~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gtes  100 (170)
T KOG2944|consen   21 YLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTES  100 (170)
T ss_pred             hhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCCCCC
Confidence            45688888999999999999999998876432110                      1113443334445554432   1


Q ss_pred             CC---cccCCCCC-CcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           59 AP---EKRGKINP-KDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        59 ~~---~~~~~~~~-g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      .+   ...++..+ |.+||||.|+|++++.++|+++|++....+.+.- . ...+|+.||||+.|||...
T Consensus       101 ~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk-~-K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  101 PPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDGK-M-KPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCcc-c-cceeEEECCCCCeEEEeec
Confidence            11   11233455 7899999999999999999999999776553311 1 2458999999999999864

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.42  E-value=9.3e-13  Score=95.43  Aligned_cols=145  Identities=19%  Similarity=0.178  Sum_probs=93.5

Q ss_pred             cceeceEEEEeC--CHHHHHHHHHHhhCCEEeeecCCCc--ce---EEEEe--CCeeEEEeecCCC--Ccc-----cCCC
Q 042945            3 ILSLNHVSFVSK--SVEKSVMFYEQVLGFVMIKRPSFNF--EG---AWLFN--HGIGIHLLESDKA--PEK-----RGKI   66 (172)
Q Consensus         3 ~~~i~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~--~~---~~~~~--~~~~l~l~~~~~~--~~~-----~~~~   66 (172)
                      +++|+||++.|.  |++++++||+++|||+.....+...  .+   ..+..  ++..+.+.++...  ...     ....
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~   80 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYG   80 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhC
Confidence            368999999999  9999999999999999877542211  11   12222  2355666665431  110     1113


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCC--------------e----eEEEEEEECCCCCEEEEEeecCCC
Q 042945           67 NPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGG--------------I----QVDQLFFHDPDGYMIEICNCQNLP  128 (172)
Q Consensus        67 ~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~--------------~----g~~~~~~~DPdG~~iei~~~~~~~  128 (172)
                      ++|..||||.|+|+++++++|+++|+++...|.....              +    ....++-+|..|+++.+.+.+-.+
T Consensus        81 G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~~yy~~l~~r~~~~~~~~~~~~l~~~~il~d~~~~~~llq~ft~~~~~  160 (191)
T cd07250          81 GAGVQHIALATDDIFATVAALRARGVEFLPIPDNYYDDLEARLDGILVDEDLDTLRELGILVDRDDGGYLLQIFTKPVFD  160 (191)
T ss_pred             CCceeEEEEECCCHHHHHHHHHHcCCeeccCchhhHHHHHHhccccccchhHHHHHHCCEEEECCCCCEEEEEeccCCCC
Confidence            5788899999999999999999999999877632110              0    011356677889999999753322


Q ss_pred             CCCCCCCCCCCccccccccc
Q 042945          129 VLPLSSCPLKLPSKRSSEKA  148 (172)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~  148 (172)
                       .+........|....+||+
T Consensus       161 -~~~~f~E~iqR~g~~gfg~  179 (191)
T cd07250         161 -RPTFFFEIIQRRGYTGFGA  179 (191)
T ss_pred             -CCCeEEEEEEEcCCCcccc
Confidence             2233333334445566654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.38  E-value=2e-11  Score=79.01  Aligned_cols=119  Identities=18%  Similarity=0.223  Sum_probs=77.1

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCee--EEEeecCCCCcccCC---CCCCcce--EEEE
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG--IHLLESDKAPEKRGK---INPKDNH--ISFQ   76 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~--l~l~~~~~~~~~~~~---~~~g~~~--v~~~   76 (172)
                      ..+-|+.|.|+|++++.+||.++||++.-...+   ..+-+...|..  .|+-...... ..+.   +.-...|  +.+.
T Consensus         3 ~~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd---~wvdfDfyGHQ~v~Hl~~q~~~~-~~g~V~~~~v~~pHfGvVl~   78 (138)
T COG3565           3 PVPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD---TWVDFDFYGHQVVAHLTPQPDSQ-GSGKVDGHGVPPPHFGVVLP   78 (138)
T ss_pred             ccceEEeeeccccHHHHhhhhhhcccccccccc---eEEEeeecccEEEEEecCCcccc-cCcccCCCCCCCccceEEEE
Confidence            346799999999999999999999998755421   11111222332  2332222111 1111   1111234  5556


Q ss_pred             eCCHHHHHHHHHhCCCeEeeceeec---CCeeEEEEEEECCCCCEEEEEeecC
Q 042945           77 CSDMKLVMRKLEEMNIEYETAVVDE---GGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        77 v~dl~~~~~~l~~~G~~i~~~~~~~---~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      ++|..++.++|.+.|+...-+|.-+   ....++.+++.||.||.+|+-....
T Consensus        79 ~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR~  131 (138)
T COG3565          79 VEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFRD  131 (138)
T ss_pred             HHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecccc
Confidence            7899999999999999887776432   2235789999999999999987543

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.35  E-value=6.1e-11  Score=80.46  Aligned_cols=109  Identities=15%  Similarity=0.064  Sum_probs=73.8

Q ss_pred             EEEEe-CCHHHHHHHHHHhhCCEEeeecCCC---------cc----eEEEEeCCeeEEEeecCCCCcccCCCCCCcceEE
Q 042945            9 VSFVS-KSVEKSVMFYEQVLGFVMIKRPSFN---------FE----GAWLFNHGIGIHLLESDKAPEKRGKINPKDNHIS   74 (172)
Q Consensus         9 v~l~v-~D~~~a~~FY~~~LG~~~~~~~~~~---------~~----~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~   74 (172)
                      ..|.+ .|.++|++||+++||+++......+         ..    ...+..++..+.+.........   ..+...+++
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~~~---~~~~~~~l~   79 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGFPF---TFGNGISLS   79 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCCCC---CCCCCEEEE
Confidence            45667 9999999999999999998753111         01    1222334555555543322111   123456899


Q ss_pred             EEeCC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEE
Q 042945           75 FQCSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC  122 (172)
Q Consensus        75 ~~v~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~  122 (172)
                      +.|+|   +++++++|.+.| ++..++... +||.+..+++||+|+.|+|.
T Consensus        80 i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~-~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          80 VECDSEEEADRLFEALSEGG-TVLMPLQKT-FWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EECCCHHHHHHHHHHHhcCC-eEeccchhc-CcccccEEEECCCCCEEEeC
Confidence            99885   778889987766 777666543 57778999999999999873

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.34  E-value=9.6e-12  Score=98.18  Aligned_cols=147  Identities=16%  Similarity=0.199  Sum_probs=95.8

Q ss_pred             CCcceeceEEEEeC--CHHHHHHHHHHhhCCEEeeecCCC--cce--EEEEe---CCeeEEEeecCCC--Ccc-----cC
Q 042945            1 MPILSLNHVSFVSK--SVEKSVMFYEQVLGFVMIKRPSFN--FEG--AWLFN---HGIGIHLLESDKA--PEK-----RG   64 (172)
Q Consensus         1 m~~~~i~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~--~~~--~~~~~---~~~~l~l~~~~~~--~~~-----~~   64 (172)
                      |.+++|+||++.|.  |+++++.||+++|||+...+.+..  ..+  .+...   ++..+++.++...  +..     ..
T Consensus       154 ~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl~~  233 (353)
T TIGR01263       154 VGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLEF  233 (353)
T ss_pred             CCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHHHH
Confidence            34678999999999  999999999999999987653211  111  12222   3356777764221  111     11


Q ss_pred             CCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecC-------------Ce----eEEEEEEECCCCCEEEEEeecCC
Q 042945           65 KINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEG-------------GI----QVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        65 ~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~-------------~~----g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      ..++|..||||.|+|+++.+++|+++|+++..+|..-.             .+    ....++-.|.+|+++.|.+.+-.
T Consensus       234 ~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~~yY~~l~~r~~~~~~~~~~~l~~~~iL~D~d~~g~llqift~~~~  313 (353)
T TIGR01263       234 YNGAGVQHIALNTDDIVRTVRALRARGVEFLDTPDTYYDLLGERLGGHVKEDLDTLRELNILIDGDEDGYLLQIFTKPLQ  313 (353)
T ss_pred             cCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCCHHHHHHHHHHhcccccchHHHHHHCCEEEecCCCceEEEEeccCCC
Confidence            23578899999999999999999999999887762100             01    01135667889999999985332


Q ss_pred             CCCCCCCCCCCCccccccccc
Q 042945          128 PVLPLSSCPLKLPSKRSSEKA  148 (172)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~  148 (172)
                       ..+........|+...+||.
T Consensus       314 -~~~~~FfEiiqR~~~~gfG~  333 (353)
T TIGR01263       314 -DRGTLFFEIIQRKGAGGFGE  333 (353)
T ss_pred             -CCCCeEEEEEEEcCCCccch
Confidence             22233334444555666664

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.24  E-value=3.6e-11  Score=80.40  Aligned_cols=117  Identities=24%  Similarity=0.374  Sum_probs=71.9

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcce----EEEEeCCe--eEEEeec---------CCCCcccCCCC-
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEG----AWLFNHGI--GIHLLES---------DKAPEKRGKIN-   67 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~----~~~~~~~~--~l~l~~~---------~~~~~~~~~~~-   67 (172)
                      ++++||.+.|+|+++|++||+++||++...........    ........  .......         ........... 
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            46899999999999999999999999998764221111    11111110  0000000         00000000011 


Q ss_pred             --CCcceEEEEeCC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           68 --PKDNHISFQCSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        68 --~g~~~v~~~v~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                        .+..|+++.+++   ...........|..+.....  ..++ ..+|++||||+.+|+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~--~~~~-~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP--GRGG-VHVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecC--CCcc-eEEEEECCCCcEEEeeC
Confidence              246799999998   66666777777888765443  2222 27999999999999973

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.23  E-value=1.9e-10  Score=90.81  Aligned_cols=121  Identities=13%  Similarity=0.116  Sum_probs=82.0

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC--CCcceEEEEeCCeeEEEeecCCCCccc----CCCCCCcceEEEEe
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS--FNFEGAWLFNHGIGIHLLESDKAPEKR----GKINPKDNHISFQC   77 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~l~l~~~~~~~~~~----~~~~~g~~~v~~~v   77 (172)
                      ++++||.+.|+|++++.+||.+.|||+......  .+.....+..++..+++..+.......    ..++++..|+||.|
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~V   80 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFRV   80 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCceeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEEE
Confidence            368999999999999999999999999987621  111122233455667776554322101    12467889999999


Q ss_pred             CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           78 SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        78 ~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +|++++++++.++|+.+..+|........+..-+.-+.|..+-|++.
T Consensus        81 ~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~  127 (353)
T TIGR01263        81 DDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDR  127 (353)
T ss_pred             CCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcC
Confidence            99999999999999999887754311112333445556666666653

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.17  E-value=2.5e-09  Score=72.78  Aligned_cols=116  Identities=16%  Similarity=0.086  Sum_probs=78.7

Q ss_pred             EEEEeC-CHHHHHHHHHHhhCCEEeeecCCCc----------ce---EEEEeCCeeEEEeecCCCCcccCCCCCCcceEE
Q 042945            9 VSFVSK-SVEKSVMFYEQVLGFVMIKRPSFNF----------EG---AWLFNHGIGIHLLESDKAPEKRGKINPKDNHIS   74 (172)
Q Consensus         9 v~l~v~-D~~~a~~FY~~~LG~~~~~~~~~~~----------~~---~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~   74 (172)
                      -.|..+ |-+++++||+++||.+...+..++.          ..   .-+..++..+.+.... +........+....|.
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~-~~~~~~~~~~~s~~l~   82 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAF-PDMGATEGGGTSLSLD   82 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCC-CccCcccCCCeeEEEE
Confidence            357778 9999999999999999887643222          11   1111233434333222 1111111122235677


Q ss_pred             EEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           75 FQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        75 ~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +.++|++++++++.+.|+++..++.+ ..||.+...++||.|+.|-|....+
T Consensus        83 ~~~~d~da~f~~a~~aGa~v~mpl~~-~fwG~r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          83 LYVEDVDAVFERAAAAGATVVMPLED-TFWGDRYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEehHHHHHHHHHHhcCCeEEecchh-cCcccceEEEECCCCCEEEEecCcc
Confidence            78889999999999999999987754 4578899999999999999987554

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.16  E-value=1.6e-10  Score=84.07  Aligned_cols=138  Identities=19%  Similarity=0.231  Sum_probs=95.9

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCc----------ceEEE----EeC-CeeEEEeecC-CCCcccCCCC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNF----------EGAWL----FNH-GIGIHLLESD-KAPEKRGKIN   67 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~----------~~~~~----~~~-~~~l~l~~~~-~~~~~~~~~~   67 (172)
                      .+..|+++.|.|.++++.||+++|||++....++..          +..|.    ..+ ...+.+++.+ +........+
T Consensus        16 ~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~YelG   95 (299)
T KOG2943|consen   16 RRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYELG   95 (299)
T ss_pred             hheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceecc
Confidence            578899999999999999999999999987643322          22222    222 2233333332 3333445557


Q ss_pred             CCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC--CCCCCCCCCCCCcccccc
Q 042945           68 PKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL--PVLPLSSCPLKLPSKRSS  145 (172)
Q Consensus        68 ~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~--~~~~~~~~~~~~~~~~~~  145 (172)
                      .+..|+.+.++|+-+..+.+...|.+       .++-  -.+++.||||+.|++.+..+.  |+....-...++..++.-
T Consensus        96 ndfg~i~I~s~dv~~~ve~v~~p~~~-------~~g~--~~~~v~dPdGykF~l~~~~p~s~pv~~V~l~VgdL~ks~ky  166 (299)
T KOG2943|consen   96 NDFGGITIASDDVFSKVEKVNAPGGK-------GSGC--GIAFVKDPDGYKFYLIDRGPQSDPVLQVMLNVGDLQKSIKY  166 (299)
T ss_pred             CCcccEEEeHHHHHHHHHHhcCcCCc-------ccce--EEEEEECCCCcEEEEeccCCCCCCeEEEEEEehhHHHHHHH
Confidence            78889999999999888888776542       2222  348899999999999975554  444555677778888888


Q ss_pred             ccccc
Q 042945          146 EKAAC  150 (172)
Q Consensus       146 ~~~~~  150 (172)
                      |+...
T Consensus       167 w~~~l  171 (299)
T KOG2943|consen  167 WEKLL  171 (299)
T ss_pred             HHHHh
Confidence            87544

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=99.14  E-value=4.2e-10  Score=86.84  Aligned_cols=106  Identities=16%  Similarity=0.153  Sum_probs=71.3

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC---CHH
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS---DMK   81 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~---dl~   81 (172)
                      +.-||+|.|+|+++|++||+.+|++.. ...   .... .. +.....++.....     ........+|+.++   ++|
T Consensus       247 ~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fsd---e~a~-cm-~dtI~vMllt~~D-----~~~~~evLl~Ls~~Sre~VD  315 (357)
T PRK01037        247 KTFSVVLEVQDLRRAKKFYSKMFGLEC-WDG---DKLF-LL-GKTSLYLQQTKAE-----KKNRGTTTLSLELECEHDFV  315 (357)
T ss_pred             ceEEEEeeeCCHHHHHHHHHHHhCCCC-CCC---Cccc-cc-cCcEEEEEecCCC-----CCCcceEEEEeccCCHHHHH
Confidence            356999999999999999999999875 321   1222 22 2222222222221     12334568899887   699


Q ss_pred             HHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           82 LVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        82 ~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      ++.++..++|.+...++.+ .|+   .--|.|||||+||+++..
T Consensus       316 ~lv~~A~aaGG~~~~~~~D-~Gf---~rsf~D~DGH~WEi~~~~  355 (357)
T PRK01037        316 RFLRRWEMLGGELGEQADG-HFP---LRLVFDLDGHIWVVSCVQ  355 (357)
T ss_pred             HHHHHHHHcCCCCCCCccc-ccC---cceeECCCCCEEEEEEEe
Confidence            9999999999976554443 344   345699999999999753

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.85  E-value=9.5e-09  Score=81.68  Aligned_cols=123  Identities=15%  Similarity=0.174  Sum_probs=84.3

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC---c-----ceEEEEeC--CeeEEEeecCCC---Ccc-----cC
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN---F-----EGAWLFNH--GIGIHLLESDKA---PEK-----RG   64 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~---~-----~~~~~~~~--~~~l~l~~~~~~---~~~-----~~   64 (172)
                      +.+|+||++.|.+++.++.||+++|||......+..   .     ....+...  ...+.|.++...   ...     ..
T Consensus       178 l~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eFL~~  257 (398)
T PLN02875        178 LRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTYLEH  257 (398)
T ss_pred             cceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHHHHh
Confidence            468999999999999999999999999887643211   1     11222222  255777776421   111     12


Q ss_pred             CCCCCcceEEEEeCCHHHHHHHHHhC----CCeEeecee--------ecC-------Ce----eEEEEEEECCCCCEEEE
Q 042945           65 KINPKDNHISFQCSDMKLVMRKLEEM----NIEYETAVV--------DEG-------GI----QVDQLFFHDPDGYMIEI  121 (172)
Q Consensus        65 ~~~~g~~~v~~~v~dl~~~~~~l~~~----G~~i~~~~~--------~~~-------~~----g~~~~~~~DPdG~~iei  121 (172)
                      ..++|..||||.|+||.+..++|++.    |++....|.        .+-       .+    ....++-.|.+|+++.|
T Consensus       258 ~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~Pp~~YYd~L~~R~~~~l~~e~~~~L~~~~ILvD~d~~G~LLQI  337 (398)
T PLN02875        258 NEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPPPPTYYKNLKKRVGDVLTEEQIKECEELGILVDKDDQGVLLQI  337 (398)
T ss_pred             cCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCChHHHHHHHHHHhccCCChhhHHHHHHcCEEEecCCCceEEEE
Confidence            23588999999999999999999999    999888541        001       11    11235667888999999


Q ss_pred             Eeec
Q 042945          122 CNCQ  125 (172)
Q Consensus       122 ~~~~  125 (172)
                      .+..
T Consensus       338 FTkp  341 (398)
T PLN02875        338 FTKP  341 (398)
T ss_pred             eccc
Confidence            9753

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.77  E-value=6e-08  Score=70.86  Aligned_cols=119  Identities=15%  Similarity=0.204  Sum_probs=77.3

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC--CeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHH
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH--GIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKL   82 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~   82 (172)
                      .+..|.|.|.|+++|++||+++||+++..... ......+..+  ...+++......-  ....+.+...+++..+++..
T Consensus       149 pv~~V~l~VgdL~ks~kyw~~~lgM~ilekee-k~t~~~mgYgd~q~~LElt~~~~~i--d~~kg~griafaip~d~~~~  225 (299)
T KOG2943|consen  149 PVLQVMLNVGDLQKSIKYWEKLLGMKILEKEE-KYTRARMGYGDEQCVLELTYNYDVI--DRAKGFGRIAFAIPTDDLPK  225 (299)
T ss_pred             CeEEEEEEehhHHHHHHHHHHHhCcchhhhhh-hhhhhhhccCCcceEEEEEeccCcc--cccccceeEEEecccccccc
Confidence            36789999999999999999999999987421 1111222222  2346665543221  11112233445555568899


Q ss_pred             HHHHHHhCCCeEeeceeec---CCeeEEEEEEECCCCCEEEEEeecC
Q 042945           83 VMRKLEEMNIEYETAVVDE---GGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        83 ~~~~l~~~G~~i~~~~~~~---~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +.+.++..+.++..+.+..   .+...+..-+.||||+.+.|+....
T Consensus       226 l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~  272 (299)
T KOG2943|consen  226 LQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEG  272 (299)
T ss_pred             HHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccHH
Confidence            9999998877766654332   2335677889999999999986433

>PRK10148 hypothetical protein; Provisional

Probab=98.71  E-value=2e-06  Score=59.74  Aligned_cols=112  Identities=15%  Similarity=0.066  Sum_probs=70.2

Q ss_pred             EEEEeC-CHHHHHHHHHHhhCCEEeeecC---CC----------------cce----EEEEeCCeeEEEeecCCCCcccC
Q 042945            9 VSFVSK-SVEKSVMFYEQVLGFVMIKRPS---FN----------------FEG----AWLFNHGIGIHLLESDKAPEKRG   64 (172)
Q Consensus         9 v~l~v~-D~~~a~~FY~~~LG~~~~~~~~---~~----------------~~~----~~~~~~~~~l~l~~~~~~~~~~~   64 (172)
                      ..|... |-+++++||+++||.++.....   ..                ...    ..+..++..+.+.......    
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~~~~----   80 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSG----   80 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCCCCc----
Confidence            355564 8999999999999988764311   00                011    1112234434333221111    


Q ss_pred             CCCCCcceEEEEeCCHHH---HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           65 KINPKDNHISFQCSDMKL---VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        65 ~~~~g~~~v~~~v~dl~~---~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      .......++++.++|.++   ++++| +.|.++..++.. ..|+.+...++||.|+.|.|.....
T Consensus        81 ~~~~~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~-~~wg~~~g~v~D~fGi~W~l~~~~~  143 (147)
T PRK10148         81 KAHYSGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQE-TFWAHGFGKVTDKFGVPWMINVVKQ  143 (147)
T ss_pred             CCCCCeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchh-cchhhccEEEECCCCCEEEEEecCC
Confidence            111135688888888776   55666 578888876654 4577788999999999999987533

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.71  E-value=1.4e-07  Score=70.22  Aligned_cols=74  Identities=19%  Similarity=0.238  Sum_probs=56.9

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCccc---CCCCCCcceEEEEeCCH
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKR---GKINPKDNHISFQCSDM   80 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~---~~~~~g~~~v~~~v~dl   80 (172)
                      +.|+||.|.|.|++++.+||+++|||+.+.+   .....|+..++..+|+....+.....   .....|...+.+.+.+-
T Consensus       167 t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~---~~~A~F~a~G~YHHHia~N~W~s~~~~~~~~~~~GLa~~~i~~~~~  243 (265)
T COG2514         167 TIIGHVHLKVADLEEAEQFYEDVLGLEVTAR---GPSALFLASGDYHHHLAANTWNSRGARPRNANASGLAWLEIHTPDP  243 (265)
T ss_pred             cEEeEEEEEeCCHHHHHHHHHHhcCCeeeec---CCcceEEecCCcceeEEEeccccCCCCCCCCCCCCcceEEEEcCCc
Confidence            6799999999999999999999999999876   23467777788878887766554322   22456777888887763

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.60  E-value=2.4e-07  Score=70.37  Aligned_cols=114  Identities=11%  Similarity=0.159  Sum_probs=74.8

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC--C--cceEEEEeCCeeEEEee-cCCCCc-cc----CCCCCCcc
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF--N--FEGAWLFNHGIGIHLLE-SDKAPE-KR----GKINPKDN   71 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~--~~~~~~~~~~~~l~l~~-~~~~~~-~~----~~~~~g~~   71 (172)
                      ++.+++||.+.|.|...+..||+..|||+.......  +  .........|....++. ...+.. ..    ..++-|..
T Consensus        14 ~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgvk   93 (381)
T KOG0638|consen   14 KFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGVK   93 (381)
T ss_pred             ceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccchh
Confidence            457899999999999999999999999998763211  0  11112223343333333 222211 11    22456678


Q ss_pred             eEEEEeCCHHHHHHHHHhCCCeEeeceeecCC-ee-EEEEEEECCC
Q 042945           72 HISFQCSDMKLVMRKLEEMNIEYETAVVDEGG-IQ-VDQLFFHDPD  115 (172)
Q Consensus        72 ~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~-~g-~~~~~~~DPd  115 (172)
                      .+||+|+|++++.+.+.++|+++..+|..... .| .+...+..+.
T Consensus        94 dvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tyg  139 (381)
T KOG0638|consen   94 DVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYG  139 (381)
T ss_pred             ceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEeccc
Confidence            99999999999999999999999988754332 12 3455555443

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.55  E-value=5.5e-06  Score=66.12  Aligned_cols=120  Identities=8%  Similarity=0.057  Sum_probs=81.9

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCC-Cc---ceEEEEeC-CeeEEEeecCCCC------------------cc
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF-NF---EGAWLFNH-GIGIHLLESDKAP------------------EK   62 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~---~~~~~~~~-~~~l~l~~~~~~~------------------~~   62 (172)
                      ++||.++|.|..++..||+..|||+.+..... ..   ...++... ...+.+..+..+.                  ..
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            68999999999999999999999998875421 11   12333344 3444333332110                  00


Q ss_pred             -----cCCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCC---e-eEEEEEEECCCCCEEEEEeec
Q 042945           63 -----RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGG---I-QVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        63 -----~~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~---~-g~~~~~~~DPdG~~iei~~~~  125 (172)
                           -..++++...|+|+|+|++++++++.+.|+++..+|+....   . .....-+.-+.|.++-|++..
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~  152 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYK  152 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccC
Confidence                 01246778899999999999999999999998887754322   1 134556777888888888754

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.53  E-value=2e-06  Score=58.91  Aligned_cols=121  Identities=12%  Similarity=0.154  Sum_probs=79.0

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcc--cCCCCCCcceEEEEeC
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEK--RGKINPKDNHISFQCS   78 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~--~~~~~~g~~~v~~~v~   78 (172)
                      |.+.++.+|.+.+.|.++...+++. |||+...+.. +.......++...+.+-..+.....  ...++++..-++|.|+
T Consensus         5 ~g~~G~dFvEFa~~~~~~l~~~~~~-lGF~~~a~hr-sk~v~l~rQG~I~~vln~ep~s~a~~~~~~HG~sv~aiafrV~   82 (139)
T PF14696_consen    5 LGLDGFDFVEFAVPDAQALAQLFTA-LGFQPVARHR-SKDVTLYRQGDINFVLNSEPDSFAAEFAAQHGPSVCAIAFRVD   82 (139)
T ss_dssp             T-EEEEEEEEEE-SSTTSCHHHHCC-CCEEEECCEC-CCSEEEEEETTEEEEEEEESTSCHHHHHHHHSSEEEEEEEEES
T ss_pred             CCCCCeEEEEEecCCHHHHHHHHHH-hCcceEEecC-CcceEEEEeCCEEEEEeCCCcchHHHHHHhcCCEEEEEEEEeC
Confidence            3467899999999998888888865 9999987642 2223334455666655442221110  1224778889999999


Q ss_pred             CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           79 DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        79 dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      |.++++++..+.|.+...++.....  ...--++-+.|-++-|++..
T Consensus        83 Da~~A~~rA~~~GA~~~~~~~~~~e--~~~paI~g~G~sl~yfVdr~  127 (139)
T PF14696_consen   83 DAAAAYERAVALGAEPVQEPTGPGE--LNIPAIRGIGGSLHYFVDRY  127 (139)
T ss_dssp             -HHHHHHHHHHTT--EEEEEEETT---BEEEEEE-CCC-EEEEEE--
T ss_pred             CHHHHHHHHHHcCCcCcccCCCCCc--EeeeeEEccCCCEEEEEecC
Confidence            9999999999999998887755443  35567788999999888753

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.50  E-value=1.1e-06  Score=62.82  Aligned_cols=121  Identities=17%  Similarity=0.245  Sum_probs=63.0

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeec---CCCcceEEEEeCCeeEEEeecCCCCccc--C--------CCCCCcce
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRP---SFNFEGAWLFNHGIGIHLLESDKAPEKR--G--------KINPKDNH   72 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~---~~~~~~~~~~~~~~~l~l~~~~~~~~~~--~--------~~~~g~~~   72 (172)
                      |+|+.+.|+|++++.++|++.|||.+....   ..+.....+...+..++++...+.....  .        ..+.|...
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYG   80 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEE
Confidence            689999999999999999888999998753   2233344444455589999864322110  1        13567789


Q ss_pred             EEEEeCCHHHHHHHHHhCCCeEeeceeecCC-eeEEEEEEECC----CCCEEEEEeecC
Q 042945           73 ISFQCSDMKLVMRKLEEMNIEYETAVVDEGG-IQVDQLFFHDP----DGYMIEICNCQN  126 (172)
Q Consensus        73 v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~-~g~~~~~~~DP----dG~~iei~~~~~  126 (172)
                      +|+.++|+++..++|.+.|+.........+. ..-+.+++.++    .+..-++++..+
T Consensus        81 ~~l~t~d~~~~~~~l~~~G~~~~~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~  139 (175)
T PF13468_consen   81 WALRTDDIEAVAARLRAAGLDAGSRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWET  139 (175)
T ss_dssp             EEEE-S-HHHHHHHHHTTT-EEEEEEEEEE-EEEEEEEEEE-SS---SS---EEEEESS
T ss_pred             EEEecCCHHHHHHHHHhcCCCCCCcCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCC
Confidence            9999999999999999999863222211111 11244566664    245556665444

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.42  E-value=4e-07  Score=70.17  Aligned_cols=145  Identities=17%  Similarity=0.196  Sum_probs=91.7

Q ss_pred             cceeceEEEEe--CCHHHHHHHHHHhhCCEEeeecCCCcceE------EEEeCC-eeEEEeecCCCCc-----ccCCCCC
Q 042945            3 ILSLNHVSFVS--KSVEKSVMFYEQVLGFVMIKRPSFNFEGA------WLFNHG-IGIHLLESDKAPE-----KRGKINP   68 (172)
Q Consensus         3 ~~~i~hv~l~v--~D~~~a~~FY~~~LG~~~~~~~~~~~~~~------~~~~~~-~~l~l~~~~~~~~-----~~~~~~~   68 (172)
                      +..|+|++..|  .+++.+..||+++|||+.....+......      +.+..+ ..+-|-.+.+...     .....+.
T Consensus       165 ~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~G~  244 (363)
T COG3185         165 LTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYRGE  244 (363)
T ss_pred             ceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhCCC
Confidence            35789997777  69999999999999999887643322221      111122 2233333222221     1123577


Q ss_pred             CcceEEEEeCCHHHHHHHHHhCCCeEeeceeec--------CC----e----eEEEEEEECCCC-CEEEEEeecCCCCCC
Q 042945           69 KDNHISFQCSDMKLVMRKLEEMNIEYETAVVDE--------GG----I----QVDQLFFHDPDG-YMIEICNCQNLPVLP  131 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~--------~~----~----g~~~~~~~DPdG-~~iei~~~~~~~~~~  131 (172)
                      |..||+|.++||-++.+++++.|++....|..-        .+    +    ....+|-.|++| .++.|.+..-  .-+
T Consensus       245 GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~tYYd~~~~R~~~~~e~ld~Lr~~~IL~D~~~~~~~lLQift~~~--~g~  322 (363)
T COG3185         245 GIQHIAFGTDDIYATVAALRERGVKFLPIPETYYDDLDARFPLHGEFLDALRELEILYDGDGGGGELLQIFTRTF--IGP  322 (363)
T ss_pred             cceEEEecccHHHHHHHHHHHcCCccCCCchhHHHHHhhcCCCChHHHHHHHhcCeEeecCCCCcEEEEEecccc--cCc
Confidence            889999999999999999999999999876321        00    0    122367778887 6777775321  223


Q ss_pred             CCCCCCCCcccccccccc
Q 042945          132 LSSCPLKLPSKRSSEKAA  149 (172)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~  149 (172)
                      ...+...-+...++||..
T Consensus       323 ~FFEiIeRR~g~~GfGeg  340 (363)
T COG3185         323 FFFEIIERRKGYQGFGEG  340 (363)
T ss_pred             eeEEEEEecccccccccc
Confidence            344444445777788754

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.39  E-value=3.3e-05  Score=50.84  Aligned_cols=112  Identities=15%  Similarity=0.121  Sum_probs=60.5

Q ss_pred             ceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC-CeeEEEeecCCCCc-ccCCCCCCcceEEEEeCCHHHHH
Q 042945            7 NHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH-GIGIHLLESDKAPE-KRGKINPKDNHISFQCSDMKLVM   84 (172)
Q Consensus         7 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~~l~l~~~~~~~~-~~~~~~~g~~~v~~~v~dl~~~~   84 (172)
                      .+-.|.|.|-+..++||+++|||++..+.   ....++... +....+++.++... ..-........+.+.|++..++.
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EE---na~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~EIe   78 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEE---NALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPKEIE   78 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEE---TTEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHHHHH
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeecc---ccEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHHHHH
Confidence            45689999999999999999999999873   223444332 22223343332221 12222334678999999877664


Q ss_pred             HHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           85 RKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        85 ~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      + |.+.|..+.. ..+..  +++.|-..+|+|..|.+....
T Consensus        79 ~-LLar~~~~~~-l~kg~--~gyAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   79 A-LLARGAQYDR-LYKGK--NGYAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             H-HHHC-S--SE-EEE-S--SSEEEEEE-TT--EEEEE--S
T ss_pred             H-HHhcccccce-eEEcC--CceEEEEECCCCCEEEEEEcC
Confidence            4 4455555333 22222  237788899999999998643

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.29  E-value=0.011  Score=39.22  Aligned_cols=93  Identities=18%  Similarity=0.197  Sum_probs=54.1

Q ss_pred             CCHHHHHHHHHHhhCCEEeee-cCCCc------c---eEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCC---H
Q 042945           14 KSVEKSVMFYEQVLGFVMIKR-PSFNF------E---GAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSD---M   80 (172)
Q Consensus        14 ~D~~~a~~FY~~~LG~~~~~~-~~~~~------~---~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d---l   80 (172)
                      .+-++|..||.++||-..+.. .+.+.      .   ...+...+..+...... ..    ........+++.++|   +
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~-~~----~~~~~~~sl~i~~~~~ee~   85 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGG-PD----FPFGNNISLCIECDDEEEI   85 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEES-TS--------TTEEEEEEESSHHHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCC-CC----CCCCCcEEEEEEcCCHHHH
Confidence            689999999999999533221 11110      0   12233345555554443 11    112234788888885   5


Q ss_pred             HHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEE
Q 042945           81 KLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC  122 (172)
Q Consensus        81 ~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~  122 (172)
                      +.++++|.+.|-          .++ ...+++|..|..|.|+
T Consensus        86 ~~~f~~Ls~gG~----------~~~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   86 DRIFDKLSEGGQ----------WFS-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHTTTE----------TCC-EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHcCCC----------ccc-eeEEEEeCCCCEEEeC
Confidence            567788888775          233 6689999999999875

>PF15067 FAM124: FAM124 family

Probab=96.80  E-value=0.018  Score=42.52  Aligned_cols=102  Identities=18%  Similarity=0.195  Sum_probs=56.4

Q ss_pred             eeceEEEEeC--CHHHHHHHHHHhhCCEEeeecCCCcceEEE-EeC--CeeEEEeecCCCCcccCCCCCCcceEEEEeCC
Q 042945            5 SLNHVSFVSK--SVEKSVMFYEQVLGFVMIKRPSFNFEGAWL-FNH--GIGIHLLESDKAPEKRGKINPKDNHISFQCSD   79 (172)
Q Consensus         5 ~i~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~-~~~--~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d   79 (172)
                      .+--++|+|+  |.+.+++||+-+|+-+...+..   +-.++ ...  +..+-+.-.. .+........-..-+.|.|.|
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~---~FC~F~lys~~~~~iQlsLK~-lp~~~~p~p~esavLqF~V~~  203 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQKE---DFCFFTLYSQPGLDIQLSLKQ-LPPGMSPEPTESAVLQFRVED  203 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC---CcEEEEEecCCCeEEEEEecc-CCCCCCcccccceEEEEEecc
Confidence            4567899998  9999999999999998865531   11111 122  2222221111 111111112233579999999


Q ss_pred             HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEE
Q 042945           80 MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIE  120 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~ie  120 (172)
                      +.++.--|-.- +..++    .   +.|  -..|||||.|=
T Consensus       204 igqLvpLLPnp-c~PIS----~---~rW--qT~D~DGNkIL  234 (236)
T PF15067_consen  204 IGQLVPLLPNP-CSPIS----E---TRW--QTEDYDGNKIL  234 (236)
T ss_pred             hhhhcccCCCC-ccccc----C---Ccc--eeeCCCCCEec
Confidence            98875443322 11111    1   122  34899999874

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=96.70  E-value=0.051  Score=42.58  Aligned_cols=111  Identities=15%  Similarity=0.226  Sum_probs=69.0

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEe-CCeeEEEeecCCCCc---ccCCCCCCcceEEEEe
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFN-HGIGIHLLESDKAPE---KRGKINPKDNHISFQC   77 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~---~~~~~~~g~~~v~~~v   77 (172)
                      ...++.+|.+.|.|.+.+..-|-..|||....+.--  ..+.+.. +...+ ++..+....   -...++++..-++|.|
T Consensus        19 ~~~GfeFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrs--k~v~l~rQGdinl-vvn~~~~s~a~~f~~~Hgps~~a~a~~V   95 (363)
T COG3185          19 GTDGFEFVEFAVPDPQEALGALLGQLGFTAVAKHRS--KAVTLYRQGDINL-VVNAEPDSFAAEFLDKHGPSACAMAFRV   95 (363)
T ss_pred             CCCceeEEEEecCCHHHHHHHHHHHhCccccccccc--cceeEEEeCCEEE-EEcCCCcchhhHHHHhcCCchheeEEee
Confidence            347899999999999544444455599998765421  2333444 44444 333332221   1123577788999999


Q ss_pred             CCHHHHHHHHHhCCCeEeecee-----ec---CCeeEEEEEEECCC
Q 042945           78 SDMKLVMRKLEEMNIEYETAVV-----DE---GGIQVDQLFFHDPD  115 (172)
Q Consensus        78 ~dl~~~~~~l~~~G~~i~~~~~-----~~---~~~g~~~~~~~DPd  115 (172)
                      +|....+++..+.|.+....+.     ..   .+.|...+|+.|.+
T Consensus        96 ~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~  141 (363)
T COG3185          96 DDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRY  141 (363)
T ss_pred             CCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccC
Confidence            9999999999999985443331     00   11133456777776

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=96.67  E-value=0.0024  Score=49.04  Aligned_cols=123  Identities=18%  Similarity=0.197  Sum_probs=78.2

Q ss_pred             CcceeceEEEEeC--CHHHHHHHHHHhhCCEEeeecCCCcceE-------EEE-eCCee--EEEeecCCCCcc-------
Q 042945            2 PILSLNHVSFVSK--SVEKSVMFYEQVLGFVMIKRPSFNFEGA-------WLF-NHGIG--IHLLESDKAPEK-------   62 (172)
Q Consensus         2 ~~~~i~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~-------~~~-~~~~~--l~l~~~~~~~~~-------   62 (172)
                      .+.+++|++..+.  .++.+.+||.+.|||.--+..+......       ++. .....  +-+-++-+....       
T Consensus       175 ~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~mpinEp~~G~k~ksQIqey  254 (381)
T KOG0638|consen  175 GLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKMPINEPAPGKKKKSQIQEY  254 (381)
T ss_pred             ceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEEEeccCCCCCCccHHHHHHH
Confidence            4678999999998  6789999999999998766532111110       011 11111  222222111111       


Q ss_pred             -cCCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCe--------------------eEEEEEEECCCCCEEEE
Q 042945           63 -RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGI--------------------QVDQLFFHDPDGYMIEI  121 (172)
Q Consensus        63 -~~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~--------------------g~~~~~~~DPdG~~iei  121 (172)
                       ....++|..|+++.++|+-++.+.+++.|.+...+|..-...                    ....+.-.|-+|+++.|
T Consensus       255 v~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD~De~gyLLQI  334 (381)
T KOG0638|consen  255 VEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVDFDENGYLLQI  334 (381)
T ss_pred             HHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEecCCCcEEeee
Confidence             112467889999999999999999999999999777221000                    01124445888999999


Q ss_pred             Eee
Q 042945          122 CNC  124 (172)
Q Consensus       122 ~~~  124 (172)
                      .+.
T Consensus       335 FTK  337 (381)
T KOG0638|consen  335 FTK  337 (381)
T ss_pred             ecc
Confidence            974

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=96.45  E-value=0.02  Score=37.22  Aligned_cols=56  Identities=18%  Similarity=0.142  Sum_probs=41.8

Q ss_pred             ceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCC-CEEEEEeecCC
Q 042945           71 NHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDG-YMIEICNCQNL  127 (172)
Q Consensus        71 ~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG-~~iei~~~~~~  127 (172)
                      .|++|.|+|++++.+.+.+ .|+........ .+.+.+..++..++| ..||++++...
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~-~~~~v~~~~~~~~~~~~~iELi~p~~~   58 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRD-EPQGVRVAFLYLGDGPVQIELIQPLDG   58 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEE-GCTTEEEEEEEETTETEEEEEEEESST
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEec-CCCCEEEEEEEeCCCcEEEEEEEeCCC
Confidence            4999999999999999998 89876654332 233456677888888 78999986553

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=94.57  E-value=0.23  Score=34.66  Aligned_cols=32  Identities=9%  Similarity=0.185  Sum_probs=28.8

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS   36 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~   36 (172)
                      ++++||+|.|.|+.++..-+++ .|.+...+.+
T Consensus       114 rGfgHIci~V~di~sac~~lke-kGV~f~Kk~~  145 (170)
T KOG2944|consen  114 RGFGHICIEVDDINSACERLKE-KGVRFKKKLK  145 (170)
T ss_pred             CccceEEEEeCCHHHHHHHHHH-hCceeeecCC
Confidence            5899999999999999999999 9999877653

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=94.32  E-value=0.19  Score=32.47  Aligned_cols=90  Identities=18%  Similarity=0.198  Sum_probs=39.5

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcc-cCCCCCCcceEEEEeC---CH
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEK-RGKINPKDNHISFQCS---DM   80 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~~~g~~~v~~~v~---dl   80 (172)
                      .+..+.|.|.| .++.+||+++||-...      ....          +.+...+... .....=++..+-|.|+   |+
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~~------~~l~----------f~ea~G~DL~~~~~~twDLe~Lkf~V~~~~Dl   67 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQLP------FFLT----------FQEAQGPDLTIENNETWDLEMLKFQVPKDFDL   67 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHHT------TTEE----------EEE---CCGSS-TTSBSSEEEEEEEES-S--H
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCCC------ceEE----------EeeccCCccccCCCcEEeeEEEEEEecCcccH
Confidence            35678999999 8899999999873221      1122          2222211111 1112234556778887   78


Q ss_pred             HHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEE
Q 042945           81 KLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMI  119 (172)
Q Consensus        81 ~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~i  119 (172)
                      .++.+++.+.++= .  +  ..   .+.+.+.||.|.-|
T Consensus        68 ~~L~~~le~~~~f-i--d--Kk---~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   68 AALKSHLEEQEFF-I--D--KK---EKFLVTSDPSQIEL   98 (101)
T ss_dssp             HHHHHHTTTS-EE-------TT----SEEEEE-TTS-EE
T ss_pred             HHHHHHhcccceE-e--c--CC---ceEEEEECCcceEE
Confidence            8888888883321 1  1  11   25688899987544

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=93.98  E-value=0.11  Score=36.79  Aligned_cols=54  Identities=11%  Similarity=0.255  Sum_probs=29.4

Q ss_pred             ceEEEEeCCHHHHHHHH-HhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           71 NHISFQCSDMKLVMRKL-EEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        71 ~~v~~~v~dl~~~~~~l-~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      .|+.+.|+|+++..+++ ...|.++....... ++|.....+.=++| +||++...+
T Consensus         2 DH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~-~~GT~N~li~f~~~-YlEli~i~~   56 (175)
T PF13468_consen    2 DHLVIAVRDLDAAVERFEQRLGFTVTPGGEHP-GWGTANALIPFGDG-YLELIAIDP   56 (175)
T ss_dssp             EEEEEE-TTGGG----GGGS--S--EEEEE-T-TT-EEEEEEE-SSS-EEEEEEES-
T ss_pred             CEEEEEcCCHHHHHHhhhhcceEeecCCCcCC-CCccEEEEEeeCCc-eEEEEEeCC
Confidence            59999999999999999 78899988765443 33333333333677 999999544

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.41  E-value=0.96  Score=30.41  Aligned_cols=57  Identities=21%  Similarity=0.441  Sum_probs=39.1

Q ss_pred             CcceEEEEeCCHHHHHHHHHhCCCeEeeceeecC----------CeeEEEEEEECCCC-CEEEEEeec
Q 042945           69 KDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEG----------GIQVDQLFFHDPDG-YMIEICNCQ  125 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~----------~~g~~~~~~~DPdG-~~iei~~~~  125 (172)
                      +..|+++.|.|+++..+...+.|.++........          +.+....++..|+| ..+|+.+..
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~   70 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFH   70 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHHcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEec
Confidence            4689999999999999998888987654332111          11234456666655 688999854

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=92.08  E-value=1.6  Score=28.21  Aligned_cols=58  Identities=14%  Similarity=0.273  Sum_probs=38.5

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECC---CCCEEEEEeecC
Q 042945           69 KDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDP---DGYMIEICNCQN  126 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DP---dG~~iei~~~~~  126 (172)
                      +..|+++.|+|+++..+...+ .|.+.........+.+....++.+.   .|..+++++...
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   62 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPD   62 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCC
Confidence            357999999999999999986 5887665432222111234555554   677888886533

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=91.29  E-value=2  Score=30.97  Aligned_cols=74  Identities=18%  Similarity=0.170  Sum_probs=42.1

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeee-cCCCcceEEEE-------eCCeeEEEeecCCCCcccCCCCCCcceEEE
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR-PSFNFEGAWLF-------NHGIGIHLLESDKAPEKRGKINPKDNHISF   75 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~-~~~~~~~~~~~-------~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~   75 (172)
                      ..++||.++|++.+.+.+|-+..+..-..-. ...+++-.++.       .++..+.+++.+.+.. +..+..|.-||.|
T Consensus        33 ~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~~vELP~P~~-K~Yp~eGWEHIE~  111 (185)
T PF06185_consen   33 YEIDHIALRVNSNETAERWKQALLQCGELLSENMINGRPICLFKLNQPLQFGGWSIDCVELPYPKD-KRYPQEGWEHIEF  111 (185)
T ss_dssp             -EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEE---S-S--SS-EEEEEEE
T ss_pred             cCCcEEEEecCCHHHHHHHHHHHHHhChhhhhceeCCeeEEEEEcCCchhcCCeeEEEEEeCCCCC-CCCCCCCceEEEE
Confidence            4589999999999999999999886544332 22233333332       2455666777653332 3334668889999


Q ss_pred             EeC
Q 042945           76 QCS   78 (172)
Q Consensus        76 ~v~   78 (172)
                      .++
T Consensus       112 Vip  114 (185)
T PF06185_consen  112 VIP  114 (185)
T ss_dssp             E--
T ss_pred             Eec
Confidence            997

; PDB: 1K4N_A.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.64  E-value=3.1  Score=26.69  Aligned_cols=56  Identities=18%  Similarity=0.202  Sum_probs=38.1

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           69 KDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      +..|+++.|.|+++..+...+ .|..+......... ..+.+.+..+++..+++....
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~i~l~~~~   59 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPER-GSYKLDLLLNGGYQLELFSFP   59 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCC-CcEEEEEecCCCcEEEEEEcC
Confidence            568999999999999999985 79887654322111 123344555677788887644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11700 hypothetical protein; Provisional

Probab=89.78  E-value=5.9  Score=28.55  Aligned_cols=74  Identities=16%  Similarity=0.113  Sum_probs=48.3

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeee-cCCCcceEEEEe-------CCeeEEEeecCCCCcccCCCCCCcceEEE
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR-PSFNFEGAWLFN-------HGIGIHLLESDKAPEKRGKINPKDNHISF   75 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~-~~~~~~~~~~~~-------~~~~l~l~~~~~~~~~~~~~~~g~~~v~~   75 (172)
                      ..++||.++|++.+.+.+|-+..+..-..-. ...+++-.++..       ++..+.+++.+.+.. +..+..|.-||.+
T Consensus        38 ~~~DHialR~n~~~tAe~w~~~l~~~G~llSen~INGRPI~l~~L~qPl~~~~w~I~cvELP~P~~-k~Yp~eGWEHIEl  116 (187)
T PRK11700         38 LEADHIALRCNQNETAERWRQGFLQCGELLSENIINGRPICLFELDQPLQVGHWSIDCVELPYPGE-KRYPHEGWEHIEL  116 (187)
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCcEEEEEEeCCCCC-CCCCCCCceEEEE
Confidence            3579999999999999999988775433221 223333333332       345567777664433 3345678889999


Q ss_pred             EeC
Q 042945           76 QCS   78 (172)
Q Consensus        76 ~v~   78 (172)
                      .++
T Consensus       117 Vlp  119 (187)
T PRK11700        117 VLP  119 (187)
T ss_pred             Eec
Confidence            997

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=89.41  E-value=2.4  Score=26.09  Aligned_cols=44  Identities=18%  Similarity=0.228  Sum_probs=34.2

Q ss_pred             CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           79 DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        79 dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      ..+++.+.+.+.|+.+..--.+..  |.+.++..|.||+.+|+.-.
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~--g~yev~~~~~dG~~~ev~vD   73 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDD--GCYEVEARDKDGKKVEVYVD   73 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCC--CEEEEEEEECCCCEEEEEEc
Confidence            689999999999996665333233  34889999999999999853

This is family M4 in the peptidase classification.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=88.61  E-value=4.7  Score=28.06  Aligned_cols=58  Identities=14%  Similarity=0.201  Sum_probs=39.9

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-CCCeEeecee---ec-------------CCe-eEEEEEEECCCCCEEEEEeecC
Q 042945           69 KDNHISFQCSDMKLVMRKLEE-MNIEYETAVV---DE-------------GGI-QVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~---~~-------------~~~-g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +..|+++.|.|+++..+...+ .|.++...+.   ..             .++ ..+..++..++|..+|+++...
T Consensus         4 ~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~   79 (162)
T TIGR03645         4 TFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKN   79 (162)
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccC
Confidence            568999999999999999977 6887643210   00             011 1344566667788899998764

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=88.30  E-value=6.6  Score=27.20  Aligned_cols=72  Identities=14%  Similarity=0.132  Sum_probs=46.9

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeee-cCCCcceEEEEe-------CCeeEEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKR-PSFNFEGAWLFN-------HGIGIHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~-~~~~~~~~~~~~-------~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      ++||.++|.+.+.+.+|-+.++..-..-. ...+++-.++..       .+..+.+++.+.+.. ...+..|.-||.+.+
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~qPl~~~~~~I~cvELP~P~~-k~Yp~eGWEHIE~Vl   80 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELLSENEINGRPIALIKLEKPLQFAGWSISIVELPFPKD-KKYPQEGWEHIEIVI   80 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCcEEEEEEeCCCCC-CCCCCCCceEEEEEe
Confidence            68999999999999999998775433221 222333333322       345566777664433 333466888999998


Q ss_pred             C
Q 042945           78 S   78 (172)
Q Consensus        78 ~   78 (172)
                      +
T Consensus        81 p   81 (149)
T cd07268          81 P   81 (149)
T ss_pred             c
Confidence            7

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN02367 lactoylglutathione lyase

Probab=88.11  E-value=2.5  Score=31.65  Aligned_cols=53  Identities=21%  Similarity=0.339  Sum_probs=37.2

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCc--ceEEEE-eCCeeEEEeecC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNF--EGAWLF-NHGIGIHLLESD   57 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~--~~~~~~-~~~~~l~l~~~~   57 (172)
                      .+++||++.|.|++++.+..++ .|.++...+..+.  ...++. -.|..+++++..
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~  223 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLK  223 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeCCccCCceEEEEEECCCCCEEEEEecc
Confidence            3799999999999999999988 9999886542211  122222 236667777654

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=86.33  E-value=4.7  Score=26.04  Aligned_cols=55  Identities=13%  Similarity=0.135  Sum_probs=36.7

Q ss_pred             ceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           71 NHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        71 ~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      .|+++.|+|+++..+...+ .|...........+.+....++.. +|..++|.+...
T Consensus         2 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~   57 (128)
T cd07249           2 DHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGL-GNVQIELIEPLD   57 (128)
T ss_pred             cEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEc-CCEEEEEEEECC
Confidence            5999999999999999887 687765433221111223445553 678899997543

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=85.70  E-value=5.3  Score=28.77  Aligned_cols=52  Identities=21%  Similarity=0.349  Sum_probs=35.0

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCc--ceEEE-EeCCeeEEEeecC
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNF--EGAWL-FNHGIGIHLLESD   57 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~--~~~~~-~~~~~~l~l~~~~   57 (172)
                      ++.|+.+.|.|++++.+.+++ .|.++...+....  ...++ .-.|..+++++..
T Consensus       121 G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        121 GFGHIGITVDDVYKACERFEK-LGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             CccEEEEEcCCHHHHHHHHHH-CCCeEEeCCccCCceeEEEEECCCCCEEEEEECC
Confidence            689999999999999999988 8998875432111  11222 1235666666644

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=83.28  E-value=8.8  Score=26.60  Aligned_cols=51  Identities=10%  Similarity=0.057  Sum_probs=34.9

Q ss_pred             CcceEEEEeCCHHHHHHHHHhC-CCeEeeceeecCCeeEEEEEEEC-CCCCEEEEEee
Q 042945           69 KDNHISFQCSDMKLVMRKLEEM-NIEYETAVVDEGGIQVDQLFFHD-PDGYMIEICNC  124 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~~-G~~i~~~~~~~~~~g~~~~~~~D-PdG~~iei~~~  124 (172)
                      |..|+++.|.|+++..+...+. |.++....   .+  ...++..+ .++..+++.+.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~---~~--~~~~~~~~~~~~~~l~l~~~   53 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEE---GD--RVRLEEGGGGPGAVVDVLEE   53 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeee---CC--EEEEEecCCCCCCEEEEEeC
Confidence            4689999999999999999764 88766432   11  12222222 35788999874

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=81.82  E-value=11  Score=24.05  Aligned_cols=54  Identities=13%  Similarity=0.180  Sum_probs=36.4

Q ss_pred             ceEEEEeCCHHHHHHHHHhC-CCeEeeceeecCCeeEEEEEEECCC---CCEEEEEeec
Q 042945           71 NHISFQCSDMKLVMRKLEEM-NIEYETAVVDEGGIQVDQLFFHDPD---GYMIEICNCQ  125 (172)
Q Consensus        71 ~~v~~~v~dl~~~~~~l~~~-G~~i~~~~~~~~~~g~~~~~~~DPd---G~~iei~~~~  125 (172)
                      .|+++.|.|+++..+...+. |.++........+ +...+++..++   +..+++....
T Consensus         2 ~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~l~~~~   59 (121)
T cd07233           2 LHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEG-KFTLVFLGYPDEDSEGVLELTYNW   59 (121)
T ss_pred             eeEEEEecCcHHHHHHHHhccCCeEEEEEecCCC-ceEEEEecCCCCCCccEEEEEecC
Confidence            69999999999999999875 9887654322221 12335555554   5788887643

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=81.24  E-value=10  Score=23.20  Aligned_cols=52  Identities=17%  Similarity=0.194  Sum_probs=37.8

Q ss_pred             eEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           72 HISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        72 ~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      |+.+.+.|+++..+.+.+ .|.++......  .. ....++.++ +..++|......
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~-~~~~~~~~~-~~~i~l~~~~~~   53 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GG-AEFAVLGLG-GTRLELFEGDEP   53 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CC-EEEEEEecC-CceEEEecCCCC
Confidence            788999999999999997 89887765422  11 244666665 789999976543

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=80.07  E-value=12  Score=24.34  Aligned_cols=52  Identities=10%  Similarity=0.111  Sum_probs=35.2

Q ss_pred             CcceEEEEeCCHHHHHHHHHhC----CCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           69 KDNHISFQCSDMKLVMRKLEEM----NIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~~----G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +..|+++.|+|+++..+...+.    |.+.....  ..    ...|+...++..++++....
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~--~~----~~~~~~~~~~~~i~l~~~~~   56 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEW--ED----GRSWRAGDGGTYLVLQQADG   56 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEee--cc----CceEEecCCceEEEEEeccc
Confidence            4579999999999999988776    88766533  11    11333334567888886543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	172
3ghj_A	141	Putative integron gene cassette protein; integron	3e-30
2p25_A	126	Glyoxalase family protein; structural genomics, MC	7e-29
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	9e-29
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	6e-28
1nki_A	135	Probable fosfomycin resistance protein; potassium	5e-26
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-25
3huh_A	152	Virulence protein STM3117; structural genomics, ny	2e-24
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-24
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	5e-24
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	4e-22
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	9e-22
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	3e-21
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	7e-21
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	4e-20
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	5e-18
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	7e-18
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-17
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	2e-16
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	1e-15
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	2e-15
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	2e-15
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	8e-14
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	9e-14
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	1e-13
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	2e-13
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	4e-07
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	7e-13
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	7e-13
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-12
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	3e-08
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-12
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	1e-11
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	1e-11
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	2e-11
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	2e-11
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	3e-11
2i7r_A	118	Conserved domain protein; structural genomics cons	5e-11
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	9e-11
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	2e-10
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	5e-10
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	2e-09
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	3e-09
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-09
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	5e-09
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	6e-09
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	2e-08
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	3e-08
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	3e-08
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	4e-08
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	3e-06
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	5e-08
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	5e-05
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	6e-08
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	5e-06
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	6e-08
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	8e-04
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	9e-08
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	9e-08
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	5e-07
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	1e-07
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	3e-07
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	2e-05
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	5e-07
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	2e-04
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	5e-07
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	2e-06
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-06
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-05
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	2e-06
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	4e-06
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	4e-06
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	1e-05
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	2e-05
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	1e-05
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	7e-05
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	4e-04
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	5e-04

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score =  106 bits (267), Expect = 3e-30
 Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 12/125 (9%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR-PSFNFEGAWLFNHGIGIHLLESDKA 59
           M I  L  V+   K++EKS  FY ++LGF       +  +   W+      + L E  + 
Sbjct: 24  MNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRAGMVVLQEEKE- 82

Query: 60  PEKRGKINPKDNHISFQCS--DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGY 117
                  N +  H SF+    +++ + + LE   +      V++  +Q   L+F DP+G+
Sbjct: 83  -------NWQQQHFSFRVEKSEIEPLKKALESKGVSVH-GPVNQEWMQAVSLYFADPNGH 134

Query: 118 MIEIC 122
            +E  
Sbjct: 135 ALEFT 139

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  102 bits (256), Expect = 7e-29
 Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR---PSFNFEGAWLFNHGIGIHLLESD 57
           M    ++HV+  + + + +  FY + LGF +++    P  N     L      + +  SD
Sbjct: 1   MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISD 60

Query: 58  KAPEKR-GKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDG 116
           + P +          H++F+   ++ V+  L E  IE E   VD+        FF DPDG
Sbjct: 61  QFPARPSYPEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTG-KKMTFFFDPDG 119

Query: 117 YMIEIC 122
             +E+ 
Sbjct: 120 LPLELH 125

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score =  102 bits (255), Expect = 9e-29
 Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 13/123 (10%)

Query: 3   ILSLNHVSFV--SKSVEKSVMFYEQVLGFVMIKRPS--FNFEGAWLFNHGIGIHLLESDK 58
           I  ++HV         E++  FY + +G   I +P       G W       IH+     
Sbjct: 8   IQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHIGVEQ- 66

Query: 59  APEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYM 118
                     K  H +F    +    ++L +  IE            V + +  DP G  
Sbjct: 67  -----NFNPAKRAHPAFYVLKIDEFKQELIKQGIEVIDDHARPD---VIRFYVSDPFGNR 118

Query: 119 IEI 121
           IE 
Sbjct: 119 IEF 121

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score =  100 bits (251), Expect = 6e-28
 Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLES-DKAPE 61
           + SLNH++     ++KSV F+ ++LG  +  R +    GA+L    + + L     +   
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN---TGAYLTCGDLWVCLSYDEARQYV 58

Query: 62  KRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
              + +      +    D + + ++LE+  +        EG       +F DPDG+ +E+
Sbjct: 59  PPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEG----ASFYFLDPDGHKLEL 114

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 95.6 bits (238), Expect = 5e-26
 Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 13/121 (10%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEK 62
           +  LNH++     +  S+ FY  +LGF +  R     +GA+L    + + L    +    
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD---QGAYLELGSLWLCLSREPQYGGP 58

Query: 63  RGKINPKDNHISFQCS--DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIE 120
                    H +F  +  D      +L    +        EG    D  +F DPDG+ +E
Sbjct: 59  AADY----THYAFGIAAADFARFAAQLRAHGVREWKQNRSEG----DSFYFLDPDGHRLE 110

Query: 121 I 121
            
Sbjct: 111 A 111

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 92.0 bits (228), Expect = 2e-24
 Identities = 26/125 (20%), Positives = 50/125 (40%), Gaps = 3/125 (2%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
           M I  ++H+      +  ++ FYE+VLGF  +     N +        I +H  E +  P
Sbjct: 19  MIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK-QNRKALIFGAQKINLHQQEMEFEP 77

Query: 61  EKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQ--VDQLFFHDPDGYM 118
           +         +      + +  V+ ++ +  I      V+  G    +  ++  DPDG +
Sbjct: 78  KASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNL 137

Query: 119 IEICN 123
           IEI  
Sbjct: 138 IEISQ 142

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 90.5 bits (225), Expect = 4e-24
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF---NHGIGIHLLES- 56
           M +  ++HVS   + ++ S  +Y ++L +  + R       ++       G+ I L E  
Sbjct: 1   MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVR-GRGDTTSFAHGVLPGGLSIVLREHD 59

Query: 57  DKAPEKRGKINPKDNHISFQCSDMK---LVMRKLEEMNIEYETAVVDEGGIQVDQLFFHD 113
               +   +  P  +H+SF    M    ++  +L +    +        G     L F D
Sbjct: 60  GGGTDLFDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTPTQELPFG---WILAFRD 116

Query: 114 PDGYMIEIC 122
            D   +E  
Sbjct: 117 ADNIALEAM 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 91.1 bits (226), Expect = 5e-24
 Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 17/136 (12%)

Query: 2   PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESD---- 57
            +  ++H++   + ++ S  FY  +LG   +           L   G   + +  D    
Sbjct: 16  NLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTIL 75

Query: 58  ---------KAPEKRGKINPKDNHISFQCSDMKL--VMRKLEEMNIEYETAVVDEGGIQV 106
                           K   +  H++F          +  + E  I      V       
Sbjct: 76  DLFGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTG-- 133

Query: 107 DQLFFHDPDGYMIEIC 122
             ++F+DPDG+MIEI 
Sbjct: 134 RGVYFYDPDGFMIEIR 149

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 85.4 bits (211), Expect = 4e-22
 Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 7/130 (5%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
           M I  L+H+      +  +  FYE+VLG    K  SF      L      I+L +     
Sbjct: 6   MKISHLDHLVLTVADIPTTTNFYEKVLGM---KAVSFGAGRIALEFGHQKINLHQLGNEF 62

Query: 61  E-KRGKINPKDNHISFQCS-DMKLVMRKLEEMNIEYETAVVDEGGIQ--VDQLFFHDPDG 116
           E K   +      + F     +   M+ +E+  +      V   G Q  +   +F DPDG
Sbjct: 63  EPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDG 122

Query: 117 YMIEICNCQN 126
            +IE+    N
Sbjct: 123 NLIEVSTYSN 132

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 84.5 bits (209), Expect = 9e-22
 Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 13/125 (10%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP----SFNFEGAWLFNHGIGIHLLESDK 58
           I  L+H++ + K + K+  F + +     I           +  +    G+ I ++E D 
Sbjct: 2   ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDS 61

Query: 59  APEKRGKINPKDNHISFQCS--DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDG 116
             E         NHI+FQ    ++     +++ + +E +       G     ++F+D D 
Sbjct: 62  LQE------RTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEG-RSIYFYDFDN 114

Query: 117 YMIEI 121
           ++ E+
Sbjct: 115 HLFEL 119

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 83.2 bits (206), Expect = 3e-21
 Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 13/134 (9%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR---PSFNFEGAWLFNHGIGIHLLES- 56
           M + +++HV+ +    +KS  FY   LGF +I+    P  +     L    I + +  + 
Sbjct: 1   MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNK 60

Query: 57  --------DKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQ 108
                           +      H++F   D++   ++L  + I  E    D+   +   
Sbjct: 61  LTDSNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKK-M 119

Query: 109 LFFHDPDGYMIEIC 122
            FF DPDG  +E+ 
Sbjct: 120 AFFFDPDGLPLELH 133

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 82.2 bits (203), Expect = 7e-21
 Identities = 21/125 (16%), Positives = 48/125 (38%), Gaps = 13/125 (10%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS----FNFEGAWLFNHGIGIHLLESDK 58
           I  L+H++F+ + +E+     E V     +              +     I + +++ +K
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK 61

Query: 59  APEKRGKINPKDNHISFQCS--DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDG 116
             E         NHI+F+    D      ++ ++ ++         G     ++F+D D 
Sbjct: 62  LAE------RSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEG-RSIYFYDDDN 114

Query: 117 YMIEI 121
           +M E+
Sbjct: 115 HMFEL 119

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 80.9 bits (199), Expect = 4e-20
 Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 7/127 (5%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
           M I  L+H+    KS++ + MFY ++LG  ++    F  +   L       +L E  K  
Sbjct: 23  MLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMT---FKEDRKALCFGDQKFNLHEVGKEF 79

Query: 61  E-KRGKINPKDNHISFQCSD-MKLVMRKLEEMNIEYETAVVDEGGIQ--VDQLFFHDPDG 116
           E K     P    I       ++ +++ L+  ++  E   V   G +  +  ++F DPD 
Sbjct: 80  EPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

Query: 117 YMIEICN 123
            +IE+ N
Sbjct: 140 NLIEVSN 146

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 74.4 bits (183), Expect = 5e-18
 Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 20/122 (16%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF---NHGIGIHLLESDKAPEK 62
           + H++     V  +  F E+  G       S     A+     N G  + L++  +    
Sbjct: 4   IKHLNLTVADVVAAREFLEKYFGL----TCSGTRGNAFAVMRDNDGFILTLMKGKEVQY- 58

Query: 63  RGKINPKDNHISFQCSDMKLVMR---KLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMI 119
                PK  H+ F     + V +   +L+E     E              +   P G+ I
Sbjct: 59  -----PKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHA----YTFYVEAPGGFTI 109

Query: 120 EI 121
           E+
Sbjct: 110 EV 111

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 75.2 bits (185), Expect = 7e-18
 Identities = 19/134 (14%), Positives = 41/134 (30%), Gaps = 17/134 (12%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF----NHGIGIHLLES 56
            P  ++   +  +  ++ +  FY  V G  M+ +      G  +F       + +   + 
Sbjct: 4   KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLK----LPGQLVFFKCGRQMLLLFDPQE 59

Query: 57  DKAPEKRGKINPKD----NHISFQCS---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQL 109
               +    I         H  F      ++     + E + I  E       G     +
Sbjct: 60  SSRADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSY--SV 117

Query: 110 FFHDPDGYMIEICN 123
           +  DP G  +E+  
Sbjct: 118 YIRDPAGNSVEVGE 131

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 73.8 bits (181), Expect = 1e-17
 Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 7/128 (5%)

Query: 2   PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP-SFNFEGAWLFNHGIGIHLLES--DK 58
            +  L++V+  ++ +     FY+QV GF  I+   S  F G       IG +  E+    
Sbjct: 5   NMADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELM 64

Query: 59  APEKRGKINPKDNHISFQCSDMKLV---MRKLEEMNIEYETAVVDEGGIQVDQLFFHDPD 115
              +  + +     ++F     + V   +            A  +       Q    DP+
Sbjct: 65  QLAQFSETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWY-QAVLLDPE 123

Query: 116 GYMIEICN 123
             +  I N
Sbjct: 124 RNVFRINN 131

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 70.7 bits (173), Expect = 2e-16
 Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 12/123 (9%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESD------KA 59
             +     + + +S  FY   LG     +   +F    LF  G  IH   S        +
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGL----KILEDFGSFVLFETGFAIHEGRSLEETIWRTS 64

Query: 60  PEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMI 119
            + +     ++  + F+ +D+    + +   ++E    +  +   Q     F+DPDG+ I
Sbjct: 65  SDAQEAYGRRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRV-FRFYDPDGHAI 122

Query: 120 EIC 122
           E+ 
Sbjct: 123 EVG 125

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 69.1 bits (169), Expect = 1e-15
 Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 7/123 (5%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKA--PEKR 63
           L+HV      +E+S+ F++ +LG +  +       G    +    +  ++++        
Sbjct: 21  LHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTF 80

Query: 64  GKINPKDNHISFQCSDMKLV---MRKLEEMNIE--YETAVVDEGGIQVDQLFFHDPDGYM 118
            +     NH++F  +  + V    +KL+E      YE      GG     +F  DP+   
Sbjct: 81  HRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIK 140

Query: 119 IEI 121
           +EI
Sbjct: 141 VEI 143

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 68.4 bits (167), Expect = 2e-15
 Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 13/123 (10%)

Query: 13  SKSVEKSVMFYEQVLGFVMIKR--PSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKD 70
           +  +++ + FYE+ L    I        ++G          HL  +         +   D
Sbjct: 19  TGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPD 78

Query: 71  NHISF---QCSDMKLVMRKLEEMNIEYETAVV---DEGGIQVDQLFFHDPDGYMIEICNC 124
           + + F      ++  +  KL+ M  +   +       GG+        DPDG+ I   N 
Sbjct: 79  SLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGV-----TIEDPDGWRIVFMNS 133

Query: 125 QNL 127
           + +
Sbjct: 134 KGI 136

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 68.0 bits (166), Expect = 2e-15
 Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 8/123 (6%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKR---PSFNFEGAWL-FNHGIGIHLLESDKAPE 61
           + HV+  + ++E+   FY    G          +  F   +L F  G  + ++       
Sbjct: 4   IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTG 63

Query: 62  KRGKINPKDNHISFQCS---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYM 118
           K    N    HI+        +  +  KL +            G     +    DP+G  
Sbjct: 64  KTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYY-ESVVLDPEGNR 122

Query: 119 IEI 121
           IEI
Sbjct: 123 IEI 125

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 63.6 bits (155), Expect = 8e-14
 Identities = 17/131 (12%), Positives = 48/131 (36%), Gaps = 15/131 (11%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR---PSFNFEGAWLFNHGIGIHLLES--- 56
            L ++H+ +  K+++ ++  ++++      +            ++ N G  + L+     
Sbjct: 5   SLKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGE 64

Query: 57  DKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQ-----LFF 111
           D    K  K      HI ++  D++  + ++ ++       +  +  I          F 
Sbjct: 65  DSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYT----LFKKAEIAPAIDNRKVAFL 120

Query: 112 HDPDGYMIEIC 122
              D  +IE+ 
Sbjct: 121 FSTDIGLIELL 131

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 63.9 bits (155), Expect = 9e-14
 Identities = 18/125 (14%), Positives = 36/125 (28%), Gaps = 10/125 (8%)

Query: 2   PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHL-LESDKAP 60
            +   +       +   S  FY+ +LG      P  +     LF    G+ L L S    
Sbjct: 22  HMTHPDFTILYVDNPPASTQFYKALLGV----DPVESSPTFSLFVLANGMKLGLWSRHTV 77

Query: 61  EKRGKINPKDNHISFQCSDMKLV---MRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGY 117
           E +  +      ++F+  +   V       +   +                    DPD +
Sbjct: 78  EPKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGY--TFTAADPDSH 135

Query: 118 MIEIC 122
            + + 
Sbjct: 136 RLRVY 140

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 64.7 bits (157), Expect = 1e-13
 Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 31/154 (20%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKR----------------------PSFNFEGAW 43
           L       K  +KS+ FY +VLG  ++++                         + + AW
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91

Query: 44  LFNHGIGIHLLESDKAPEKR------GKINPKD-NHISFQCSDMKLVMRKLEEMNIEYET 96
            F+    + L  +    +        G  +P+   HI     D+    ++ EE+ +++  
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151

Query: 97  AVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVL 130
              D  G      F  DPDGY IEI N   +  +
Sbjct: 152 KPDD--GKMKGLAFIQDPDGYWIEILNPNKIATI 183

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 65.4 bits (159), Expect = 2e-13
 Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 17/138 (12%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAW---LF------NHGIGI 51
             I   +H+S V+K+  ++  FY+ VLG   +K  + N +      LF      + G  +
Sbjct: 26  YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKM-TVNQDDPSMYHLFYGDKTGSPGTEL 84

Query: 52  HLLESDKAPEKRGKINPKDNHISFQCSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQ 108
              E           N     I         +     + E+ ++++   +          
Sbjct: 85  SFFEIPLVGRTYRGTN-AITRIGLLVPSEDSLHYWKERFEKFDVKHS-EMTTYANRPA-- 140

Query: 109 LFFHDPDGYMIEICNCQN 126
           L F D +G  + +     
Sbjct: 141 LQFEDAEGLRLVLLVSNG 158

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 47.7 bits (113), Expect = 4e-07
 Identities = 17/122 (13%), Positives = 46/122 (37%), Gaps = 11/122 (9%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRP--SFNFEGAWLFNHGIGIHLLESDKAPEKR 63
           +  V    + ++K      ++ G+  + R      F+          I +   D   EK 
Sbjct: 181 MGSVELTVRRLDKMASTLTEIFGYTEVSRNDQEAIFQSIK-GEAFGEIVVKYLDGPTEKP 239

Query: 64  GKINPKDNHISFQCSDMKLVMR---KLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIE 120
           G+     +H++ +  +   +     ++++      + ++D    +   L+F + +G + E
Sbjct: 240 GR--GSIHHLAIRVKNDAELAYWEEQVKQRGFHS-SGIIDRFYFK--SLYFRESNGILFE 294

Query: 121 IC 122
           I 
Sbjct: 295 IA 296

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 61.8 bits (150), Expect = 7e-13
 Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 23/143 (16%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR--------------PSFNFEGAWL-- 44
             +L +++VS V +S++ ++ F+E+ +G  +  R               S   E A +  
Sbjct: 7   NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVT 65

Query: 45  FNHGIGIHLLESDKAPEKRGKINPKDN-----HISFQCSDMKLVMRKLEEMNIEYETAVV 99
            +    I L      P          N      + F   D+  ++ +L +   E    VV
Sbjct: 66  PDGHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVV 125

Query: 100 DEGGIQVDQLFFHDPDGYMIEIC 122
                     +    +G +I + 
Sbjct: 126 QYENS-YRLCYIRGVEGILIGLA 147

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 61.3 bits (149), Expect = 7e-13
 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 14/132 (10%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR---PSFNFEGAWLFNHGIGIHLLE---- 55
           +  LNHV+     +EK+  FY+ +LG  + +    P       ++      + LL     
Sbjct: 3   LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGL 62

Query: 56  -SDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIE--YETAVVDEGGIQVDQLFFH 112
            S  A   +       +HI  +  ++   +  L++  I    E   +   G  V  +F H
Sbjct: 63  DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPV--IFLH 120

Query: 113 --DPDGYMIEIC 122
             D  G ++E+ 
Sbjct: 121 PKDCGGVLVELE 132

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 63.6 bits (154), Expect = 1e-12
 Identities = 26/146 (17%), Positives = 53/146 (36%), Gaps = 17/146 (11%)

Query: 2   PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFE---------GAWLFNHGIGIH 52
             + ++H++ +    +++  FY  VLG  ++K+ + NF+         G      G  I 
Sbjct: 5   KTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQ-TVNFDDPGTYHLYFGNEGGKPGTIIT 63

Query: 53  LLESDKAPEKRGKINPKDNHISFQCSDMKL--VMRKLEEMNIEYETAVVDEGGIQVDQLF 110
                 A +            S+      +    ++LE+ N+ Y    ++  G Q   + 
Sbjct: 64  FFPWAGARQGVIGDGQV-GVTSYVVPKGAMAFWEKRLEKFNVPYTK--IERFGEQY--VE 118

Query: 111 FHDPDGYMIEICNCQNLPVLPLSSCP 136
           F DP G  +EI   +       +   
Sbjct: 119 FDDPHGLHLEIVEREEGEANTWTFGE 144

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 50.9 bits (121), Expect = 3e-08
 Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 8/125 (6%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
           + I      + +S+  +K+    E ++G   + +           + G  I L  +    
Sbjct: 149 VAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGDFVRYRSAGDIGNVIDLKLTPIGR 208

Query: 61  EKRGKINPKDNHISFQCSDMKLVMR---KLEEMNIEYETAVVDEGGIQVDQLFFHDPDGY 117
            + G      +HI+++ +D +  +     +        T V D        ++F +    
Sbjct: 209 GQMGA--GTVHHIAWRANDDEDQLDWQRYIASHGYGV-TPVRDRNYFNA--IYFREHGEI 263

Query: 118 MIEIC 122
           + EI 
Sbjct: 264 LFEIA 268

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 59.3 bits (143), Expect = 5e-12
 Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 17/126 (13%)

Query: 16  VEKSVMFYEQVLGF-VMIKRPSFNFEGAWLFNHGIGIHLLESDKA-----PEKRGKINPK 69
           +  S  F+  VLGF V  +RP   F   +L   G+ + L                     
Sbjct: 16  INVSQSFFVDVLGFEVKYERPDEEF--VYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGS 73

Query: 70  DNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVD-------QLFFHDPDGYMIEIC 122
             +  +   D++ + +++ E   +     ++    Q         Q     PDGY+    
Sbjct: 74  GVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRF- 132

Query: 123 NCQNLP 128
            CQ++ 
Sbjct: 133 -CQDIH 137

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 58.1 bits (140), Expect = 1e-11
 Identities = 23/128 (17%), Positives = 38/128 (29%), Gaps = 13/128 (10%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
            P ++ N       +VE+S  FY  +        P F       F               
Sbjct: 9   GPTITPNLQLVYVSNVERSTDFYRFIFKK----EPVFVTPRYVAFPSSGDALFAIWSGGE 64

Query: 61  EKRGKINPKDNHISFQCSDMKLV------MRKLEEMNIEYETAVVDEGGIQVDQLFFHDP 114
           E   +I P+ + I       + V        K +   I        +   +       DP
Sbjct: 65  EPVAEI-PRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRT--FLISDP 121

Query: 115 DGYMIEIC 122
           DG++I +C
Sbjct: 122 DGHIIRVC 129

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 60.1 bits (145), Expect = 1e-11
 Identities = 16/127 (12%), Positives = 35/127 (27%), Gaps = 15/127 (11%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
             + S+  ++  +  +++ + FY  +LG   +         A+    G+      +    
Sbjct: 22  GHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHE----QADAFTIQLGVSQIQFRAAADG 77

Query: 61  EKRGKINPKDNHISFQCSDMKL--VMRKLEEMNIEYETA---VVDEGGIQVDQLFFHDPD 115
            K         HI+   +          L                         +  DP 
Sbjct: 78  TKPF------YHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVEDPS 131

Query: 116 GYMIEIC 122
           G +IE+ 
Sbjct: 132 GNIIELI 138

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 57.9 bits (140), Expect = 2e-11
 Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 13/133 (9%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR---PSFNFEGAWLFNHGIGIHLLES- 56
                L+H+     S++  + FY   L   ++     PS   + A+L      I LLE  
Sbjct: 4   EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPL 63

Query: 57  --DKAPEKRGKINPKD-NHISFQCSDMKLVMRKLEEMNIE--YETAVVDEGGIQVDQLFF 111
             +    K  +   +  +HI+     ++  +++++E  ++   +  V    G QV   F 
Sbjct: 64  SEESPIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQV--AFL 121

Query: 112 H--DPDGYMIEIC 122
           H     G + E C
Sbjct: 122 HPRSARGVLYEFC 134

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 57.7 bits (139), Expect = 2e-11
 Identities = 19/129 (14%), Positives = 41/129 (31%), Gaps = 12/129 (9%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEG-AWLFNHGIGIHLLESDKA 59
           M +  +  ++     +E S  FY +  G+     P F      +   +G  +        
Sbjct: 1   MSLQQVAVITLGIGDLEASARFYGEGFGW----APVFRNPEIIFYQMNGFVLATWLVQNL 56

Query: 60  PEKRGKINPKDN---HISFQCS---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHD 113
            E  G           ++       ++  +M +L     +            + + +  D
Sbjct: 57  QEDVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGL-RGYVAD 115

Query: 114 PDGYMIEIC 122
           PDG++ EI 
Sbjct: 116 PDGHIWEIA 124

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 57.4 bits (138), Expect = 3e-11
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 10/125 (8%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHL-LESDKA 59
           + +   N V F  K+  KS  FY+ +L      +P  +     +F    G+ L L + + 
Sbjct: 2   VMLSDPNLVLFYVKNPAKSEEFYKNLLDT----QPIESSPTFAMFVMKTGLRLGLWAQEE 57

Query: 60  PEKRGKINPKDNHISFQCSDMKLV---MRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDG 116
            E +         +SFQ +  ++V    R+  +  I                    DPD 
Sbjct: 58  IEPKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGY--TFVGVDPDE 115

Query: 117 YMIEI 121
           + + I
Sbjct: 116 HRLRI 120

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 56.0 bits (135), Expect = 5e-11
 Identities = 17/116 (14%), Positives = 36/116 (31%), Gaps = 7/116 (6%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGK 65
           LN +  +  +V +     E +L      +  +  +G   F  G    +L  +        
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDK----KADYANDGFAQFTIGSHCLMLSQNHLVPLENF 61

Query: 66  INPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
                  I  +  D+    ++L E+ I+               L    P G +++ 
Sbjct: 62  --QSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTE-SLLVQGPAGLVLDF 114

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 55.9 bits (134), Expect = 9e-11
 Identities = 15/124 (12%), Positives = 41/124 (33%), Gaps = 6/124 (4%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
                + H++  ++ ++++  FY   LG  + +R     +   L   G  +    SD+  
Sbjct: 5   RNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP---DRITLDFFGDQLVCHLSDRWD 61

Query: 61  EKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVV---DEGGIQVDQLFFHDPDGY 117
            +                    + +  ++  I +   +    +    + +  F  DP   
Sbjct: 62  REVSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNN 121

Query: 118 MIEI 121
           ++E 
Sbjct: 122 LLEF 125

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 54.4 bits (131), Expect = 2e-10
 Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 8/107 (7%)

Query: 16  VEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISF 75
             ++  FY  +LG  +     +    A        +       +             +S 
Sbjct: 18  PARAQAFYGDILGMPVAMDHGWIVTHASPLEAHAQVSFAREGGSG-------TDVPDLSI 70

Query: 76  QCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC 122
           +  +   V  ++ +  +  E   V E    V +LF  DP G +I I 
Sbjct: 71  EVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINIL 116

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 54.1 bits (130), Expect = 5e-10
 Identities = 22/123 (17%), Positives = 38/123 (30%), Gaps = 10/123 (8%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
           M IL +         +  ++ FYE++L   +  R  F      +    I   LL +    
Sbjct: 3   MKILQI-LSRLYVADLNPALEFYEELLETPVAMR--FEIPQTGVELAQISTILLIAGSEE 59

Query: 61  EKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDE-GGIQVDQLFFHDPDGYMI 119
             +     ++   +F    +      LEE   E          G  +        DG +I
Sbjct: 60  ALKP---FRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNM---TVRHSDGSVI 113

Query: 120 EIC 122
           E  
Sbjct: 114 EYV 116

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 52.4 bits (126), Expect = 2e-09
 Identities = 26/142 (18%), Positives = 57/142 (40%), Gaps = 12/142 (8%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR---PSFNFEGAWL-FNHGIGIHLLE- 55
           MP   + H       +++S+ FY + LG  ++++   P   +   +L +   +   +LE 
Sbjct: 4   MPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLEL 63

Query: 56  -SDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDP 114
             +         +    HI+    D+K ++  + + ++       + G +     F  DP
Sbjct: 64  TYNYGVTSYKH-DEAYGHIAIGVEDVKELVADMRKHDVPI-DYEDESGFM----AFVVDP 117

Query: 115 DGYMIEICNCQNLPVLPLSSCP 136
           DGY IE+ N + +     +   
Sbjct: 118 DGYYIELLNEKTMMEKAEADMK 139

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 52.0 bits (125), Expect = 3e-09
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 5/121 (4%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKR---PSFNFEGAWL-FNHGIGIHLLESDKAPE 61
           L H       +++S+ FY +VLG  +++    P + +  A++ +       ++E      
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 62  KRGKINPKD-NHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIE 120
                      HI+    +      K+ +             G      F  DPDGY IE
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122

Query: 121 I 121
           +
Sbjct: 123 L 123

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 52.4 bits (125), Expect = 3e-09
 Identities = 22/125 (17%), Positives = 39/125 (31%), Gaps = 12/125 (9%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF----NHGIGIHLL-----ES 56
           ++  +       K+  FY   LGF++           WL         G  LL      +
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVG-ADRWLTVVSPEAPDGTQLLLEPSSHA 85

Query: 57  DKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDG 116
              P K   +       SF   D+     +L  + + +     D G +        D  G
Sbjct: 86  AVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVT--AILDDTCG 143

Query: 117 YMIEI 121
            +I++
Sbjct: 144 NLIQL 148

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 51.0 bits (122), Expect = 6e-09
 Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 15/135 (11%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKA----PE 61
           ++  + V + + KS+ FY + LG  +            + + GI +     +      PE
Sbjct: 5   ISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 63

Query: 62  KRGKINPKDNHISFQCSDMKLV---MRKLEEMNIEYETAVVDE--GGIQVDQLFFHDPDG 116
            +         I+F+  D   V     +L +   E      +   G          DPDG
Sbjct: 64  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYA---IVKDPDG 120

Query: 117 YMIEICNCQNLPVLP 131
            ++++     LP+  
Sbjct: 121 NVVDL--FAPLPLEH 133

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 49.6 bits (118), Expect = 2e-08
 Identities = 21/123 (17%), Positives = 47/123 (38%), Gaps = 8/123 (6%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
           + +L +  ++  +  ++  + FY  ++GF                 H      L S + P
Sbjct: 3   LSLL-ITSITINTSHLQGMLGFYR-IIGFQFTASKVDKGSEVHRAVHNGVEFSLYSIQNP 60

Query: 61  EKRGKINPKDNHISFQCSDMKLVMRKLEEM-NIEYETAVVDEGGIQVDQLFFHDPDGYMI 119
           ++          + FQ +D++  +++L ++          D    +       DPDG+ I
Sbjct: 61  QRSQ---IPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKK--AIVLDPDGHSI 115

Query: 120 EIC 122
           E+C
Sbjct: 116 ELC 118

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 48.8 bits (116), Expect = 3e-08
 Identities = 15/115 (13%), Positives = 36/115 (31%), Gaps = 9/115 (7%)

Query: 11  FVSKSVEKSVMFYEQVLGF-VMIKRPSFNFEGAWLFNHGIGIHLLES--DKAPEKRGKIN 67
             ++ V ++V F+   LGF  +     F    A +    + + +        P+      
Sbjct: 11  LTARDVAEAVEFWTDRLGFSRVFVEDDF----AGVVRDDVTLFISAVQDQVVPDNTQAWV 66

Query: 68  PKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC 122
                        ++V     + +    T +V++   +  +    DP G  +   
Sbjct: 67  WVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGR--EFALRDPAGNCVHFV 119

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 49.3 bits (117), Expect = 3e-08
 Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 17/139 (12%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP---------SFNFEGAWLFNHGIGI 51
              + ++HV++     +++  +Y++  G+  + R                A L  H   +
Sbjct: 5   DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQV 64

Query: 52  HLLESDKAPEKRGKINPKDN------HISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQ 105
            ++          K   K N      H++++  D+  V   L E  ++        G   
Sbjct: 65  QVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGG 124

Query: 106 VDQLFFH--DPDGYMIEIC 122
               F H     G +IE+ 
Sbjct: 125 NRINFMHPKSGKGVLIELT 143

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 50.6 bits (121), Expect = 4e-08
 Identities = 19/128 (14%), Positives = 41/128 (32%), Gaps = 16/128 (12%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGI---HLLESD 57
             +L   H      ++E+ + FY  VLG V   R     +   ++               
Sbjct: 4   TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRD----DQGRVYFKCWDERDHSCYIIR 59

Query: 58  KAPEKRGKINPKDNHISFQCS---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDP 114
           +A           +   F+      ++ +   L+   +        E     +++ F  P
Sbjct: 60  EADTAG------IDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELP 113

Query: 115 DGYMIEIC 122
            G++IE+ 
Sbjct: 114 SGHLIELY 121

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 44.8 bits (106), Expect = 3e-06
 Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 29/132 (21%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVM---IKRPSFNFEGAWLFNHGIGIHLLESDKAPEK 62
           L+H      ++ +    + +VLGF +   +  P  + +     +    +H +   + PEK
Sbjct: 152 LDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYPEK 211

Query: 63  RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVD----------QLF-- 110
                 K +H SF     + V+R  + M+            + VD               
Sbjct: 212 -----GKLHHCSFLLESWEQVLRAGDIMS---------MNEVNVDIGPTRHGVTRGCTIY 257

Query: 111 FHDPDGYMIEIC 122
             DP G   E  
Sbjct: 258 AWDPSGNRFETF 269

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 50.4 bits (120), Expect = 5e-08
 Identities = 16/128 (12%), Positives = 41/128 (32%), Gaps = 14/128 (10%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
             +  L ++     +++    +   ++G  ++       +           H +      
Sbjct: 2   AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE---DDRIYLRMDRWHHRIVLHADG 58

Query: 61  EKRGKINPKDNHISFQCS---DMKLVMRKLEEMNIEYETAVVDEGGI-QVDQLF-FHDPD 115
                      +I ++ +   ++  +  +L+   I +E A   +    +V  L   HDP 
Sbjct: 59  SDD------LAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPG 112

Query: 116 GYMIEICN 123
           G   EI  
Sbjct: 113 GNPTEIFY 120

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 21/133 (15%), Positives = 38/133 (28%), Gaps = 30/133 (22%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFV---MIKRPSFNFEGAWLFNHGIGI-HLLESDKAPE 61
           L H+      VE++  FY  +                 G  +F H     H L     P 
Sbjct: 147 LGHIIIREDDVEEATRFYRLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVGPM 206

Query: 62  KRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVD----------QLFF 111
                  + NH+  + + +  +    + +          +  I V            L F
Sbjct: 207 D-----KRINHLMIEYTHLDDLGYAHDLVR---------QQKIDVTLQIGKHSNDEALTF 252

Query: 112 --HDPDGYMIEIC 122
              +P G++ E  
Sbjct: 253 YCANPSGWLWEPG 265

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 50.0 bits (119), Expect = 6e-08
 Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 15/124 (12%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG-IGIHLLESDKAPE 61
           I  L      S   ++++ F+ + LG  +  R     +  +L  +       L+  +APE
Sbjct: 9   IAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---QSVYLRGYEDPYPWSLKITEAPE 65

Query: 62  KRGKINPKDNHISFQCS---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYM 118
                     H + + S    ++   + L + N++   +    G        +  PDG+ 
Sbjct: 66  AG------MGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGY--GKTFEYQSPDGHN 117

Query: 119 IEIC 122
           +++ 
Sbjct: 118 LQLL 121

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 44.6 bits (105), Expect = 5e-06
 Identities = 24/137 (17%), Positives = 47/137 (34%), Gaps = 31/137 (22%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVM---IKRPSFNFEGAWLF-NHGIGIHLLES 56
           +P+  ++H++ +S  V      +E+ LGF     +   +    GAW+  N          
Sbjct: 149 IPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVVDGNVEI-GAWMSSNLLGHEVACMR 207

Query: 57  DKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVD--------- 107
           D           K +H++F     +  +  +E            +  IQ++         
Sbjct: 208 DMTGGH-----GKLHHLAFFYGTGQHNIDAVEMFR---------DYDIQIEAGPDKHGIT 253

Query: 108 -QLF--FHDPDGYMIEI 121
              F    +P G  IE+
Sbjct: 254 QSQFLYVFEPGGNRIEL 270

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 50.0 bits (119), Expect = 6e-08
 Identities = 14/128 (10%), Positives = 39/128 (30%), Gaps = 14/128 (10%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
             ++ L ++    K  +    F   +LG  ++       +  +        H +      
Sbjct: 5   AAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE---KDRFYLRMDYWHHRIVVHHNG 61

Query: 61  EKRGKINPKDNHISFQCS---DMKLVMRKLEEMNIEYETAVVDEGGI--QVDQLFFHDPD 115
           +          ++ ++ +   + + + +KL +   +       E      +  +   DP 
Sbjct: 62  QDD------LEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPG 115

Query: 116 GYMIEICN 123
           G   EI  
Sbjct: 116 GNPTEIFW 123

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 37.7 bits (87), Expect = 8e-04
 Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 32/134 (23%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGF-----VMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
           L H       V ++  FY  +LGF       I  P+         +     H +     P
Sbjct: 150 LGHCIVRQTDVAEAHKFYS-LLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGAMP 208

Query: 61  EKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVD----------QLF 110
                   + NH+  + + M+ +    ++           +  I +            L 
Sbjct: 209 AA-----KRLNHLMLEYTHMEDLGYTHQQFV---------KNEIDIALQLGIHANDKALT 254

Query: 111 F--HDPDGYMIEIC 122
           F    P G++IE  
Sbjct: 255 FYGATPSGWLIEPG 268

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 47.9 bits (114), Expect = 9e-08
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 12/128 (9%)

Query: 1   MPILSLNHVS--FVSKSVEKSVMFYEQVLGFVMIKRPSFNFEG-AWLFNHGIGIHLLESD 57
           M +  ++ ++       +++++  +   LGF +     +     A+L   G G+ LLE  
Sbjct: 1   MSLSDIHQITPFLHIPDMQEALTLFCDTLGFELK----YRHSNYAYLELSGCGLRLLEEP 56

Query: 58  KAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQ---VDQLFFHDP 114
                   I      I    SD+  +  KL           V+          +     P
Sbjct: 57  ARKIIPDGIARVA--ICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMP 114

Query: 115 DGYMIEIC 122
           DG  +   
Sbjct: 115 DGDWLNFT 122

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 49.5 bits (118), Expect = 9e-08
 Identities = 18/140 (12%), Positives = 40/140 (28%), Gaps = 38/140 (27%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVM---IKRPSFNFEGAWL----FNHGIGIHL 53
           M  +  +H       +  +   + +VLGF +   +   +      +L      H +    
Sbjct: 146 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFI- 204

Query: 54  LESDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVD------ 107
                          + +H+SF     + ++R  + ++              +D      
Sbjct: 205 ---------HHPEKGRLHHVSFHLETWEDLLRAADLIS---------MTDTSIDIGPTRH 246

Query: 108 ----QLF--FHDPDGYMIEI 121
                    F DP G   E+
Sbjct: 247 GLTHGKTIYFFDPSGNRNEV 266

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 47.1 bits (112), Expect = 5e-07
 Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 14/127 (11%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN--FEGAWLFNHGIGIHLLESDK 58
             ++   HV      + K++  Y ++LG + + R      +  AW       + L E+D+
Sbjct: 3   KGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREADE 62

Query: 59  APEKRGKINPKDNHISFQCS---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPD 115
                    P  + + F+      ++ + R L       E     E      ++ F  P 
Sbjct: 63  ---------PGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPS 113

Query: 116 GYMIEIC 122
           G+  E+ 
Sbjct: 114 GHHFELY 120

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 47.9 bits (114), Expect = 1e-07
 Identities = 23/146 (15%), Positives = 50/146 (34%), Gaps = 28/146 (19%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR-----------------PSFNFEGAW 43
           + + +   +  V + +E+S+  Y +  G    +                       + A+
Sbjct: 15  LDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAF 74

Query: 44  LFNHGIGIHLLESDKAP----EKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVV 99
                + + L+E D+ P    E   K     +HI+F   DM   + +L    ++    V+
Sbjct: 75  FELGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMK----VI 130

Query: 100 DEGGIQ-VDQLFFH--DPDGYMIEIC 122
            +G  +     +         MIE+ 
Sbjct: 131 QKGDFEGGRYAYIDTLRALKVMIELL 156

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 48.0 bits (114), Expect = 3e-07
 Identities = 19/133 (14%), Positives = 38/133 (28%), Gaps = 20/133 (15%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGF-----VMIKRPSFNFEGAWLFNHGIGIHLLE 55
                L H        +K++ FY  VLGF     + +K        A+  +     H L 
Sbjct: 138 TGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLA 197

Query: 56  SDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEG----GIQVDQLF- 110
               P        + +H   + + +  V    + ++      ++             +  
Sbjct: 198 IAAFPLP-----KRIHHFMLEVASLDDVGFAFDRVD---ADGLITSTLGRHTND-HMVSF 248

Query: 111 -FHDPDGYMIEIC 122
               P G  +E  
Sbjct: 249 YASTPSGVEVEYG 261

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 24/129 (18%), Positives = 40/129 (31%), Gaps = 21/129 (16%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF---NHGIGIHLLESDKA 59
           I SL ++ F    V     F  Q LG +         +   LF   +    I + + +  
Sbjct: 2   IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTT----DNGDLFRIDSRAWRIAVQQGEV- 56

Query: 60  PEKRGKINPKDNHISFQCS---DMKLVMRKLEEMNIEYETAVVDEGGI-QVDQLF-FHDP 114
                          ++ +    +  +  KL++  I   T          V  L  F DP
Sbjct: 57  --------DDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADP 108

Query: 115 DGYMIEICN 123
            G  +EI  
Sbjct: 109 FGLPLEIYY 117

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 47.4 bits (112), Expect = 5e-07
 Identities = 25/125 (20%), Positives = 37/125 (29%), Gaps = 13/125 (10%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG-IGIHLLESDKAPE 61
           IL   +   V   + KS  FY  VLG  +           +L +      H L   K P 
Sbjct: 15  ILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE---NQIYLRSFEEFIHHNLVLTKGPV 71

Query: 62  KRGKINPKDNHISFQCS---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYM 118
                      ++F+     D+       +E+    E           D L   DP G+ 
Sbjct: 72  AA------LKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFP 125

Query: 119 IEICN 123
            E   
Sbjct: 126 YEFFF 130

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 25/129 (19%), Positives = 52/129 (40%), Gaps = 16/129 (12%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVM---IKRPSFNFEGAWLFNHGIGIHLLESD 57
             ++ L+H + V+  V +   + E  LGF +   I+        AW+ +    +H     
Sbjct: 148 GELVRLDHFNQVTPDVPRGRKYLE-DLGFRVTEDIQDDEGTTYAAWM-HRKGTVHDTALT 205

Query: 58  KAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVD--EGGIQVDQ---LFFH 112
                     P+ +H++F   +   +++  ++M     +  ++   G   V     L+  
Sbjct: 206 GGN------GPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYIL 259

Query: 113 DPDGYMIEI 121
           DPD + IEI
Sbjct: 260 DPDNHRIEI 268

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 47.3 bits (112), Expect = 5e-07
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 14/128 (10%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
           M I SL ++   +  +     +  +VLG V  K      EGA           L      
Sbjct: 1   MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EGALYLRMDDFPARLVVVPGE 57

Query: 61  EKRGKINPKDNHISFQCSDMKLVMR---KLEEMNIEYETAVVDEGGI-QVDQLF-FHDPD 115
             R           ++C++ + +     +L+     Y+ A   E    +VD++  F DP 
Sbjct: 58  HDR------LLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPS 111

Query: 116 GYMIEICN 123
           G  +E+ +
Sbjct: 112 GNCLEVFH 119

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 24/139 (17%), Positives = 38/139 (27%), Gaps = 37/139 (26%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGF---------VMIKRPSFNFEGAWLFNHGIGI--HLL 54
           + HV   ++   +++ FY  VLGF           +     +   AWL   G     H L
Sbjct: 143 MGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSL 202

Query: 55  ESDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVD------- 107
                P           H+  +      V   L+               + +        
Sbjct: 203 AFLPMPTS-----SGIVHLMVEVEQADDVGLCLDRAL---------RRKVPMSATLGRHV 248

Query: 108 ---QLFF--HDPDGYMIEI 121
               L F    P G+ IE 
Sbjct: 249 NDLMLSFYMKTPGGFDIEF 267

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 19/130 (14%)

Query: 1   MP---ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF-NHGIGIHLLES 56
           M    +  + +V +  K  +    FY  V G   +   +     AW         H+++ 
Sbjct: 1   MSLSRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA---NNAWFKAQGADEHHVVQL 57

Query: 57  DKAPEKRGKINPKDNHISFQCSDMKLVMR---KLEEMNIEYET--AVVDEGGIQVDQLFF 111
            +A E R       + I+        V      +E    +  +  AV+   G       F
Sbjct: 58  RRADENR------IDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPG-GGYGFRF 110

Query: 112 HDPDGYMIEI 121
             PDG + E+
Sbjct: 111 FSPDGLLFEV 120

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 31/129 (24%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGK 65
           ++H+   S + +  V F+  VLGF +           +L  +    H +     P     
Sbjct: 142 ISHIVLHSPNHQDMVKFFTDVLGFKV--SDWLGDFMCFLRCNSAH-HRIAILPGP----- 193

Query: 66  INPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVD----------QLF--FHD 113
             P  NH+++    +  +MR    +            GI +             F  F  
Sbjct: 194 --PCLNHVAYDMLSVDDMMRGAHRLK---------VKGIDIGWGPGRHTAGNNTFSYFVT 242

Query: 114 PDGYMIEIC 122
           P G++ E  
Sbjct: 243 PGGFVTEYT 251

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 45.3 bits (107), Expect = 2e-06
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 13/125 (10%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG-IGIHLLESDKAPE 61
           I+   ++  V   + KS  FY  VLG  + +         +L +      H L   + P 
Sbjct: 15  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE---NTIYLRSLEEFIHHNLVLRQGPI 71

Query: 62  KRGKINPKDNHISFQCS---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYM 118
                       +++     ++       +E+    E           D +   DP G+ 
Sbjct: 72  AA------VAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFP 125

Query: 119 IEICN 123
            E   
Sbjct: 126 YEFFY 130

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 44.6 bits (105), Expect = 4e-06
 Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 16/129 (12%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVM---IKRPSFNFEGAWLFNHGIGIHLLESD 57
             ++ L+H + V+  V +   + E  LGF +   IK        AW+ +    +H     
Sbjct: 148 GELVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWM-HRKQTVHDTALT 205

Query: 58  KAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVD--EGGIQVDQ---LFFH 112
                     P+ +H++F   +   +++  ++M     +  ++   G   V     L+  
Sbjct: 206 GGNG------PRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYIL 259

Query: 113 DPDGYMIEI 121
           DPDG+ IEI
Sbjct: 260 DPDGHRIEI 268

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 42.9 bits (101), Expect = 4e-06
 Identities = 14/117 (11%), Positives = 29/117 (24%), Gaps = 15/117 (12%)

Query: 11  FVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKD 70
             +  V  +V F+   LGF            A +    I +H+  ++            +
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDF---AGVRRGDIRLHISRTEHQIV------ADN 61

Query: 71  NHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVD------QLFFHDPDGYMIEI 121
                + +D   +  +                   V       +    DP G  +  
Sbjct: 62  TSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHF 118

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 19/126 (15%), Positives = 34/126 (26%), Gaps = 15/126 (11%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEK 62
           I  L ++ F  K V     F  + +G +           A L+        +        
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSA----GDAALYRADQRAWRIAVQPGELD 57

Query: 63  RGKINPKDNHISFQCSDMKLVMR---KLEEMNIEYETAVVDEGG--IQVDQLFFHDPDGY 117
                    +   +  D   + R   KL +  + +             +  L   DP G 
Sbjct: 58  DL------AYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGL 111

Query: 118 MIEICN 123
            +EI  
Sbjct: 112 PLEIYY 117

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 20/139 (14%), Positives = 37/139 (26%), Gaps = 28/139 (20%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGF-----VMIKRPSFNFEGAWLFNHGIGIHLLE 55
                + H         K++ FY +VLGF     + I+        A   +     H + 
Sbjct: 138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIA 197

Query: 56  SDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQ-------VDQ 108
               P        + +H   Q + +  V    + ++          G I         DQ
Sbjct: 198 LAAFPIP-----KRIHHFMLQANTIDDVGYAFDRLD--------AAGRITSLLGRHTNDQ 244

Query: 109 ---LFFHDPDGYMIEICNC 124
               +   P   +      
Sbjct: 245 TLSFYADTPSPMIEVEFGW 263

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 41.8 bits (98), Expect = 1e-05
 Identities = 19/121 (15%), Positives = 40/121 (33%), Gaps = 21/121 (17%)

Query: 11  FVSKSVEKSVMFYEQVLGFVMIKRPSFNFEG-AWLFNHGIGIHLLESDKAPEKRGKINPK 69
             S+  + +  FYE+ LGF ++    F   G   L    + +               +P 
Sbjct: 9   LPSRDFDSTAAFYER-LGFGIV----FRDAGWMILQRGDLMLEFFAHPGL-------DPL 56

Query: 70  DNH--ISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQ------LFFHDPDGYMIEI 121
            +      +  D+    R+ + + I+  ++          Q          DPDG ++ +
Sbjct: 57  ASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRL 116

Query: 122 C 122
            
Sbjct: 117 I 117

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 40.1 bits (93), Expect = 7e-05
 Identities = 13/119 (10%), Positives = 41/119 (34%), Gaps = 10/119 (8%)

Query: 11  FVSKSVEKSVMFYEQVLGF-VMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPK 69
           + +K ++K+V ++E++LG+   I        G +         +  +   P +   +   
Sbjct: 27  YFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFKG 86

Query: 70  DNH----ISFQCSDMKLVMRKLEEMNIEYETAVVDE--GGIQVDQLFFHDPDGYMIEIC 122
           +             +  + + ++E   +  + +  +  G     +      DG ++   
Sbjct: 87  EPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWG---ARECSITTTDGCILRFF 142

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 13/120 (10%), Positives = 37/120 (30%), Gaps = 6/120 (5%)

Query: 5   SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGI-GIHLLESDKAPEKR 63
            + H        +++  FY    G+ + + P  ++        G  G+            
Sbjct: 25  RIVHFEIPFDDGDRARAFYRDAFGWAIAEIPDMDYSMVTTGPVGESGMPDEPGYINGGMM 84

Query: 64  GKINPKDNHISFQCSDMKLVMRKLEEM--NIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
            +       ++     ++  + ++E +          V   G      +F D +G ++ +
Sbjct: 85  QRGEVTTPVVTVDVESIESALERIESLGGKTVTGRTPVGNMGFAA---YFTDSEGNVVGL 141

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 37.5 bits (87), Expect = 5e-04
 Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 3/109 (2%)

Query: 16  VEKSVMFYEQVLGF--VMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHI 73
            +++V +  +V GF  ++ +        A L   G  + +  + +              +
Sbjct: 13  PDRAVDWLVRVFGFRLLLRQPAIGTIRHADLDTGGGIVMVRRTGEPYTVSCAGGHTCKQV 72

Query: 74  SFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC 122
               SD+     +      +    + D+      Q    D +G++ E  
Sbjct: 73  IVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLR-QYLVRDLEGHLWEFT 120

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	172
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.9
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.9
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.89
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.89
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.88
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.88
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.88
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.88
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.88
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.87
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.87
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.87
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.87
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.87
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.86
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.86
3ghj_A	141	Putative integron gene cassette protein; integron	99.86
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.86
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.86
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.86
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.86
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.85
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.85
2i7r_A	118	Conserved domain protein; structural genomics cons	99.85
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.85
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.85
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.85
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.85
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.85
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.85
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.85
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.84
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.84
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.84
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.84
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.84
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.83
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.83
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.83
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.82
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.82
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.82
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.82
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.82
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.81
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.81
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.81
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.8
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.8
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.79
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.79
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.79
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.79
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.78
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.76
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.76
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.75
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.75
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.75
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.75
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.74
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.74
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.73
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.73
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.73
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.73
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.72
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.72
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.72
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.71
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.7
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.69
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.68
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.68
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.68
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.67
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.67
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.67
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.66
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.66
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.65
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.65
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.62
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.62
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.61
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.61
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.6
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.58
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.56
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.56
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.53
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.52
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.44
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.43
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.4
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.4
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.35
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.33
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.33
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.25
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.21
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.19
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.18
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.3
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.21
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	97.71
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	97.35
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	96.66
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	94.18
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	93.08
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	91.89
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	91.74
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	91.58
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	90.73
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	90.37
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	90.05
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	89.76
2p25_A	126	Glyoxalase family protein; structural genomics, MC	89.34
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	88.99
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	88.9
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	88.11
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	85.26
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	83.26
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	82.19
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	81.74
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	81.32
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	81.19

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.90  E-value=1.4e-22  Score=136.19  Aligned_cols=122  Identities=24%  Similarity=0.322  Sum_probs=92.7

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC---CCcceEEEEeCCeeEEEee-------cCCCCccc-CC-CCC
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS---FNFEGAWLFNHGIGIHLLE-------SDKAPEKR-GK-INP   68 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~~~l~l~~-------~~~~~~~~-~~-~~~   68 (172)
                      |++++|+||.|.|+|++++++||+++||+++..+..   ......++..++..++++.       ....+... .. ...
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREAC   80 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCCC
Confidence            889999999999999999999999999999986531   1112344555667788887       22221111 11 345


Q ss_pred             CcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           69 KDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      +..|++|.|+|+++++++|+++|+++...+... .++.+.+|++|||||.|||+|
T Consensus        81 g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           81 GLRHLAFYVEDVEASRQELIALGIRVEEVRYDD-YTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCCCCCEECT-TSCCEEEEEECTTCCEEEEEC
T ss_pred             CeEEEEEEECCHHHHHHHHHhCCCcccceeccC-CCceEEEEEECCCCCEEEEeC
Confidence            668999999999999999999999988766543 335588999999999999985

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.90  E-value=3.2e-22  Score=134.59  Aligned_cols=123  Identities=23%  Similarity=0.356  Sum_probs=95.8

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCc-ccCCCCCCcceEEEEeCC
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPE-KRGKINPKDNHISFQCSD   79 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~g~~~v~~~v~d   79 (172)
                      |++++|+|+.|.|+|++++++||+++||+++..+.   ....++..++..+.+........ ......++..|++|.|+|
T Consensus         6 m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~d   82 (133)
T 3ey7_A            6 MKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---AGRIALEFGHQKINLHQLGNEFEPKAQNVRVGSADLCFITDT   82 (133)
T ss_dssp             CCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---TTEEEEEETTEEEEEEETTSCCSSCCTTCCTTCCEEEEECSS
T ss_pred             eEecccCEEEEEECCHHHHHHHHHHccCceEEEec---CCeEEEEcCCEEEEEEcCCCCccccCCCCCCCccEEEEEeCc
Confidence            57789999999999999999999999999998763   23455556677777776543211 122345677899999997


Q ss_pred             -HHHHHHHHHhCCCeEeeceeecCC--eeEEEEEEECCCCCEEEEEeecC
Q 042945           80 -MKLVMRKLEEMNIEYETAVVDEGG--IQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        80 -l~~~~~~l~~~G~~i~~~~~~~~~--~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                       +++++++|+++|+++..++....+  .+.+.+|++|||||.|||+++.+
T Consensus        83 d~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           83 VLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             CHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             HHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence             999999999999998877644322  23478999999999999998643

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.89  E-value=3.5e-22  Score=133.12  Aligned_cols=122  Identities=25%  Similarity=0.314  Sum_probs=91.6

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeec---CCCcceEEEEeCCeeEEEeecCCCCccc-CCCCCCcceEEEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP---SFNFEGAWLFNHGIGIHLLESDKAPEKR-GKINPKDNHISFQ   76 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~---~~~~~~~~~~~~~~~l~l~~~~~~~~~~-~~~~~g~~~v~~~   76 (172)
                      |++++|+|+.|.|+|++++++||+++||+++..+.   +......++..++..++++........+ .....+..|++|.
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~~~~~~   80 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSYPEALGLRHLAFK   80 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCCSSCCSSCCCEEEE
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCCCCCCccceEEEEE
Confidence            88999999999999999999999999999987642   1111123344455577787653222111 1224567799999


Q ss_pred             eCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           77 CSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        77 v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      |+|+++++++|+++|+++...+... .+|.+.+|++|||||.|||++
T Consensus        81 v~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           81 VEHIEEVIAFLNEQGIETEPLRVDD-FTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             CSCHHHHHHHHHHTTCCCCCCEECT-TTCCEEEEEECTTCCEEEEEC
T ss_pred             eCCHHHHHHHHHHcCCccccccccC-CCCcEEEEEECCCCCEEEeeC
Confidence            9999999999999999988665432 345588999999999999985

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.89  E-value=1.1e-21  Score=135.59  Aligned_cols=124  Identities=22%  Similarity=0.351  Sum_probs=94.0

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCC-cccCCCCCCcceEEEEeC-
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP-EKRGKINPKDNHISFQCS-   78 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~g~~~v~~~v~-   78 (172)
                      |++.+|+||.|.|+|++++++||+++|||++..+.   ....++..++..+.+....... ........+..|++|.++ 
T Consensus        19 m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~g~~hi~f~~~~   95 (152)
T 3huh_A           19 MIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---QNRKALIFGAQKINLHQQEMEFEPKASRPTPGSADLCFITST   95 (152)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---TTEEEEEETTEEEEEEETTBCCSSCCSSCCTTCCEEEEEESS
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---CCeEEEEeCCeEEEEeccCCcCCCcCcCCCCCccEEEEEecC
Confidence            56789999999999999999999999999998773   2345566667777777654321 112223556789999987 


Q ss_pred             CHHHHHHHHHhCCCeEeeceeecC-Cee-EEEEEEECCCCCEEEEEeecCC
Q 042945           79 DMKLVMRKLEEMNIEYETAVVDEG-GIQ-VDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        79 dl~~~~~~l~~~G~~i~~~~~~~~-~~g-~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      |+++++++|+++|+++..+|.... +.| .+.+|++|||||.|||++..+.
T Consensus        96 dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           96 PINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             CHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            999999999999999887664432 222 4889999999999999997664

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.88  E-value=6.5e-22  Score=133.54  Aligned_cols=120  Identities=15%  Similarity=0.234  Sum_probs=91.2

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeec----CCCcceEEEEeCCeeEEEeecCCCCccc---CCCCCCcceEEE
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP----SFNFEGAWLFNHGIGIHLLESDKAPEKR---GKINPKDNHISF   75 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~~~~~~~~~~~~~l~l~~~~~~~~~~---~~~~~g~~~v~~   75 (172)
                      +++|+||+|.|+|+++|++||+ +||++...+.    .......++..++..+++++........   ...+.+..|++|
T Consensus         5 ~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hiaf   83 (133)
T 3hdp_A            5 SLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHICY   83 (133)
T ss_dssp             CCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEEE
T ss_pred             ceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEEE
Confidence            5789999999999999999999 9999986542    1122344555667788888765332110   011456679999


Q ss_pred             EeCCHHHHHHHHHhCCCeEeeceeec-CCeeEEEEEEECCCCCEEEEEe
Q 042945           76 QCSDMKLVMRKLEEMNIEYETAVVDE-GGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        76 ~v~dl~~~~~~l~~~G~~i~~~~~~~-~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      .|+|+++++++|+++|+++..+|... ..+|.+.+|++|||||+|||++
T Consensus        84 ~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e  132 (133)
T 3hdp_A           84 EVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLE  132 (133)
T ss_dssp             EESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEE
T ss_pred             EcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEec
Confidence            99999999999999999988765432 2235688999999999999997

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.88  E-value=2e-21  Score=130.13  Aligned_cols=116  Identities=22%  Similarity=0.297  Sum_probs=91.1

Q ss_pred             CCcceeceEEEEe--CCHHHHHHHHHHhhCCEEeeecCC--CcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            1 MPILSLNHVSFVS--KSVEKSVMFYEQVLGFVMIKRPSF--NFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         1 m~~~~i~hv~l~v--~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      |++.+|+||.|.|  +|++++++||+++||++...+...  .....++..++..+++......      ...+..|++|.
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------~~~~~~~~~f~   79 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHIGVEQNF------NPAKRAHPAFY   79 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCCEEEEETTEEEEEEECTTC------CCCSSSCEEEE
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCceEEEeCCEEEEEEecCCC------CCCCceEEEEE
Confidence            5678999999999  899999999999999998865321  1234566666667777653211      12466899999


Q ss_pred             eCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           77 CSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        77 v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      |+|+++++++|+++|+++..++. .  +|.+.+|++|||||.|||++..
T Consensus        80 v~d~~~~~~~l~~~G~~~~~~~~-~--~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           80 VLKIDEFKQELIKQGIEVIDDHA-R--PDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             ETTHHHHHHHHHHTTCCCEEECS-S--TTEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCHHHHHHHHHHcCCCccCCCC-C--CCeeEEEEECCCCCEEEEEeCC
Confidence            99999999999999999887662 2  2458899999999999999853

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.88  E-value=2.3e-21  Score=129.53  Aligned_cols=119  Identities=18%  Similarity=0.223  Sum_probs=90.7

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeec---CCCcceEEEEe-CCeeEEEeecCCCCcccCCCCCCcceEEEEeCC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP---SFNFEGAWLFN-HGIGIHLLESDKAPEKRGKINPKDNHISFQCSD   79 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~---~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d   79 (172)
                      ++|+|+.|.|+|++++++||+++||++...+.   ..+....++.. ++..++++........+.....+..|++|.|+|
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~hi~~~v~d   81 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGT   81 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCCCSSCSSCCCEEEECSS
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCCCcCCCceEEEEEEcCC
Confidence            57999999999999999999999999987652   11122334433 456678877653332222245567999999998


Q ss_pred             ---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           80 ---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        80 ---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                         +++++++|+++|+++..+|... ++|.+.+|++|||||.|||+.
T Consensus        82 ~~~v~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~  127 (127)
T 3e5d_A           82 KEAVDELTEKLRQDGFAIAGEPRMT-GDGYYESVVLDPEGNRIEITW  127 (127)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEEC-TTSCEEEEEECTTSCEEEEEC
T ss_pred             HHHHHHHHHHHHHcCCeEecCcccC-CCCcEEEEEECCCCCEEEEeC
Confidence               8899999999999998877653 345688999999999999973

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.88  E-value=7.9e-22  Score=133.87  Aligned_cols=123  Identities=21%  Similarity=0.325  Sum_probs=91.7

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC---cceEEEEeCCeeEEEeecCCCCccc-CCCCCCcceEEEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN---FEGAWLFNHGIGIHLLESDKAPEKR-GKINPKDNHISFQ   76 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~~~~-~~~~~g~~~v~~~   76 (172)
                      |++++|.|+.|.|+|++++++||+++||+++..+....   ....++. ++..+.+.......... .....+..|++|.
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~   79 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREHDGGGTDLFDETRPGLDHLSFS   79 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEETTCSSSCCCTTSSEEEEEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeCCCCcccCCCCCCCCcceEEEE
Confidence            78999999999999999999999999999998653211   1112222 55667777654321111 1234566799999


Q ss_pred             e---CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           77 C---SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        77 v---~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      |   +|+++++++|+++|+++.. +.. .++| +.+|++|||||.|||++..+.
T Consensus        80 v~~~~d~~~~~~~l~~~G~~~~~-~~~-~~~g-~~~~~~DPdG~~iel~~~~~~  130 (136)
T 2rk0_A           80 VESMTDLDVLEERLAKAGAAFTP-TQE-LPFG-WILAFRDADNIALEAMLGREG  130 (136)
T ss_dssp             ESSHHHHHHHHHHHHHHTCCBCC-CEE-ETTE-EEEEEECTTCCEEEEEEECTT
T ss_pred             eCCHHHHHHHHHHHHHCCCcccC-ccc-cCCc-eEEEEECCCCCEEEEEEcCCC
Confidence            9   8999999999999999874 333 3355 889999999999999997765

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.88  E-value=7.9e-22  Score=137.07  Aligned_cols=120  Identities=15%  Similarity=0.200  Sum_probs=84.8

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCc-ceEEEEeC-C--eeEEEeecCCCCcc----cCCCCCCcceEE
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNF-EGAWLFNH-G--IGIHLLESDKAPEK----RGKINPKDNHIS   74 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~~~~~~-~--~~l~l~~~~~~~~~----~~~~~~g~~~v~   74 (172)
                      .++|+|+.|.|+|+++|++||+++|||++......+. ....+... +  ..+.+......+..    ......+..|++
T Consensus        24 ~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~l~  103 (155)
T 4g6x_A           24 AMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPAAS  103 (155)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCSEE
T ss_pred             ceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCceEEEEeccCCCcceEEEeccCCCccccccccccccCCceEEE
Confidence            4789999999999999999999999999876432111 11111111 1  11222222211110    011234667999


Q ss_pred             EEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           75 FQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        75 ~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      |.|+|+++++++|+++|+++..+|.+.. +| +.+||+|||||+|||+|.
T Consensus       104 f~VdDvda~~~~l~~~Gv~~~~~p~~~~-~g-~~~~f~DPdGn~iel~q~  151 (155)
T 4g6x_A          104 FAVDDIAAEYERLSALGVRFTQEPTDMG-PV-VTAILDDTCGNLIQLMQI  151 (155)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEEECS-SC-EEEEEECSSSCEEEEEEC
T ss_pred             eeechhhhhhhHHhcCCcEEeeCCEEcC-Ce-EEEEEECCCCCEEEEEEE
Confidence            9999999999999999999998887654 34 789999999999999984

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.87  E-value=7.2e-21  Score=131.03  Aligned_cols=121  Identities=23%  Similarity=0.368  Sum_probs=91.0

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCC-CcccCCCCCCcceEEEEeC-
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKA-PEKRGKINPKDNHISFQCS-   78 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~g~~~v~~~v~-   78 (172)
                      |++.+|+||.|.|+|++++++||+++|||++....   ....++..++..+.+...... .+......+|..|++|.++ 
T Consensus        23 m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~g~~~~~~~~~~   99 (147)
T 3zw5_A           23 MLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---EDRKALCFGDQKFNLHEVGKEFEPKAAHPVPGSLDICLITEV   99 (147)
T ss_dssp             TSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---TTEEEEEETTEEEEEEETTSCCSSCCSSCCTTCCEEEEECSS
T ss_pred             eecccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---CCceEEEECCcEEEEEEcCCCcCcccCCCCCCCceEEEEecc
Confidence            57899999999999999999999999999998653   223445556666666654322 1112223456689999886 


Q ss_pred             CHHHHHHHHHhCCCeEeeceeecC-C-eeEEEEEEECCCCCEEEEEee
Q 042945           79 DMKLVMRKLEEMNIEYETAVVDEG-G-IQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        79 dl~~~~~~l~~~G~~i~~~~~~~~-~-~g~~~~~~~DPdG~~iei~~~  124 (172)
                      |+++++++|+++|+++...|.... . ...+.+||+|||||.|||+++
T Consensus       100 dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A          100 PLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             CHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             CHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            999999999999999886664322 1 124689999999999999974

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.87  E-value=5.7e-21  Score=131.79  Aligned_cols=124  Identities=19%  Similarity=0.298  Sum_probs=93.5

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC---------CCcceEEEEeC-CeeEEEeecCCCCc---ccCCCC
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS---------FNFEGAWLFNH-GIGIHLLESDKAPE---KRGKIN   67 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---------~~~~~~~~~~~-~~~l~l~~~~~~~~---~~~~~~   67 (172)
                      |++++|+||.|.|+|++++++||+++||+++..+..         ......++... +..++++.......   .+....
T Consensus        15 ~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~   94 (156)
T 3kol_A           15 GNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPNPEKTF   94 (156)
T ss_dssp             TSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSSSTTCCC
T ss_pred             cccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCCCCCCCC
Confidence            357899999999999999999999999999886321         01223444443 46677877653221   112234


Q ss_pred             CCcceEEEEeC--CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           68 PKDNHISFQCS--DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        68 ~g~~~v~~~v~--dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      .+..|++|.|+  |+++++++|+++|+++..++.... ++ +.+|++|||||.|||++...
T Consensus        95 ~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~-~g-~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           95 TRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRP-TG-RGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             SSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC--CC-EEEEEECTTSCEEEEEECCC
T ss_pred             CceEEEEEEecHHHHHHHHHHHHHCCCccccCceecC-Cc-cEEEEECCCCCEEEEEecCC
Confidence            67789999999  999999999999999987776553 34 58999999999999998643

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.87  E-value=1.4e-21  Score=131.18  Aligned_cols=121  Identities=18%  Similarity=0.260  Sum_probs=90.6

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC---CCcceEEEEeCCeeEEEeecCCCCccc-----CCCCCCcceEE
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS---FNFEGAWLFNHGIGIHLLESDKAPEKR-----GKINPKDNHIS   74 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~~~l~l~~~~~~~~~~-----~~~~~g~~~v~   74 (172)
                      +++|+|+.|.|+|++++++||+++||++...+..   .+....++..++..++++.........     .....+..|++
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi~   82 (134)
T 3rmu_A            3 LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHIC   82 (134)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEEE
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEEE
Confidence            6899999999999999999999999999876421   122345555667778887754322110     12345678999


Q ss_pred             EEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEE--ECCCCCEEEEEe
Q 042945           75 FQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFF--HDPDGYMIEICN  123 (172)
Q Consensus        75 ~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~--~DPdG~~iei~~  123 (172)
                      |.|+|+++++++|+++|+++..++.....+|.+.+++  +|||||.|||++
T Consensus        83 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           83 IEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             EEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             EEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            9999999999999999999876543333334456666  899999999997

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.87  E-value=5e-21  Score=128.73  Aligned_cols=120  Identities=17%  Similarity=0.209  Sum_probs=89.8

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEE--e--CCeeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF--N--HGIGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~--~--~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      |++++|+|+.|.|+|++++++||+++||+++......+....+..  .  ++..+++.......  .....++..|++|.
T Consensus         9 ~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~   86 (133)
T 4hc5_A            9 LMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGLPSWYE--DGRKPGGYTGISLI   86 (133)
T ss_dssp             CSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEECTTCSCEEEEECGGGCS--SCCCSCEEEEEEEE
T ss_pred             ccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCCceEEEEECCCCceEEEEecCcccc--cccCCCCeEEEEEE
Confidence            457899999999999999999999999999987632112223332  2  23456666543211  11123456899999


Q ss_pred             eCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           77 CSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        77 v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      |+|+++++++|+++|+++..++.... +|.+.+|++||+||.|||++
T Consensus        87 v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           87 TRDIDEAYKTLTERGVTFTKPPEMMP-WGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             ESCHHHHHHHHHHTTCEESSSCEECT-TSCEEEEEECTTCEEEEEEE
T ss_pred             eCCHHHHHHHHHHCCCEeecCCCcCC-CCCEEEEEECCCCCEEEEEe
Confidence            99999999999999999987776544 45588999999999999987

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.86  E-value=1.6e-20  Score=126.60  Aligned_cols=118  Identities=16%  Similarity=0.246  Sum_probs=83.9

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEE-eCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHH
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF-NHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKL   82 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~   82 (172)
                      ..|+||.|.|+|++++++||++ ||+++...........++. .++..+.+.......    ....+..+++|.|+|+++
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~l~f~v~dvd~   79 (128)
T 3g12_A            5 LLITSITINTSHLQGMLGFYRI-IGFQFTASKVDKGSEVHRAVHNGVEFSLYSIQNPQ----RSQIPSLQLGFQITDLEK   79 (128)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH-HTCCCEEC-----CCEEEEEETTEEEEEEECCCCS----SCCCCSEEEEEEESCHHH
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCCCCCEEEEEeCCCeEEEEEECCCCc----CCCCCceEEEEEeCCHHH
Confidence            5799999999999999999999 9999876521111233333 456666664432211    123345789999999999


Q ss_pred             HHHHHHhCCCe-EeeceeecCCeeEEEEEEECCCCCEEEEEeecCCC
Q 042945           83 VMRKLEEMNIE-YETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLP  128 (172)
Q Consensus        83 ~~~~l~~~G~~-i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~  128 (172)
                      ++++|+++|++ +..+|... ++|.+ ++++|||||+|||.+..+.+
T Consensus        80 ~~~~l~~~G~~~~~~~p~~~-~~G~~-~~~~DPdGn~iel~~~~~~~  124 (128)
T 3g12_A           80 TVQELVKIPGAMCILDPTDM-PDGKK-AIVLDPDGHSIELCELEGHH  124 (128)
T ss_dssp             HHHHHTTSTTCEEEEEEEEC-C-CEE-EEEECTTCCEEEEEC-----
T ss_pred             HHHHHHHCCCceeccCceeC-CCccE-EEEECCCCCEEEEEEecccc
Confidence            99999999999 87777654 35666 99999999999999977653

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.86  E-value=1.5e-20  Score=127.11  Aligned_cols=115  Identities=15%  Similarity=0.190  Sum_probs=89.5

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEE-eCCeeEEEeecCCCCcccCCCCCCcceEEEEeCC-
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF-NHGIGIHLLESDKAPEKRGKINPKDNHISFQCSD-   79 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d-   79 (172)
                      ++.+++||.|.|+|++++++||+++||++.....+   ....+. .++..+.++......   ....++..|++|.|+| 
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~~~~~v~~~   83 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP---RYVAFPSSGDALFAIWSGGEEP---VAEIPRFSEIGIMLPTG   83 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS---SEEEEECSTTCEEEEESSSCCC---CTTSCCCEEEEEEESSH
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC---CEEEEEcCCCcEEEEEeCCCCC---cCCCCCcceEEEEeCCH
Confidence            34789999999999999999999999999876532   222232 345667777654111   1234567899999986 


Q ss_pred             --HHHHHHHHHh---CCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           80 --MKLVMRKLEE---MNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        80 --l~~~~~~l~~---~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                        +++++++|++   +|+++..+|... ++| +.+|++|||||.|||++.
T Consensus        84 ~dv~~~~~~l~~~~~~G~~~~~~p~~~-~~g-~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           84 EDVDKLFNEWTKQKSHQIIVIKEPYTD-VFG-RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             HHHHHHHHHHHHCSSSCCEEEEEEEEE-TTE-EEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHHHhhhcCCCEEeeCCccc-Cce-EEEEEECCCCCEEEEEeC
Confidence              9999999999   999999877665 456 889999999999999974

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.86  E-value=1e-20  Score=129.49  Aligned_cols=113  Identities=27%  Similarity=0.370  Sum_probs=86.1

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC--CeeEEEeecCCCCcccCCCCCCcceEEEEeC
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH--GIGIHLLESDKAPEKRGKINPKDNHISFQCS   78 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~   78 (172)
                      |++.+|+||.|.|.|++++++||+++||+++...... ....++..+  +..+.+.....        ..+..|++|.|+
T Consensus        24 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~l~l~~~~~--------~~~~~h~~~~v~   94 (141)
T 3ghj_A           24 MNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSA-RRWNFLWVSGRAGMVVLQEEKE--------NWQQQHFSFRVE   94 (141)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETT-TTEEEEEETTTTEEEEEEECCS--------SCCCCEEEEEEC
T ss_pred             eeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-CcEEEEEecCCCcEEEEeccCC--------CCCCceEEEEEe
Confidence            5788999999999999999999999999999876421 233444333  45666665421        235679999997


Q ss_pred             --CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           79 --DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        79 --dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                        |+++++++|+++|+++..++.. ...+.+.+|++|||||.|||++
T Consensus        95 ~~dld~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           95 KSEIEPLKKALESKGVSVHGPVNQ-EWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             GGGHHHHHHHHHHTTCCCEEEEEE-GGGTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCeEeCCccc-CCCCceEEEEECCCCCEEEEEE
Confidence              9999999999999998843333 2224588999999999999986

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.86  E-value=1.7e-21  Score=136.17  Aligned_cols=125  Identities=18%  Similarity=0.240  Sum_probs=94.0

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC---CCcceEEEEeCCeeEEEeecCCCCccc----CCCCCCcceEE
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS---FNFEGAWLFNHGIGIHLLESDKAPEKR----GKINPKDNHIS   74 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~~~l~l~~~~~~~~~~----~~~~~g~~~v~   74 (172)
                      ++++|+||.|.|+|+++|++||+++||+++..+..   ......++..++..++++.........    ...+.|..|++
T Consensus         5 ~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hia   84 (161)
T 3oa4_A            5 KSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHIA   84 (161)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEEE
T ss_pred             ccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEEE
Confidence            47899999999999999999999999999877532   122344555567778888765332110    01245778999


Q ss_pred             EEeCCHHHHHHHHHhCCCeEeec-eeecCCeeEEEEEE--ECCCCCEEEEEeecCC
Q 042945           75 FQCSDMKLVMRKLEEMNIEYETA-VVDEGGIQVDQLFF--HDPDGYMIEICNCQNL  127 (172)
Q Consensus        75 ~~v~dl~~~~~~l~~~G~~i~~~-~~~~~~~g~~~~~~--~DPdG~~iei~~~~~~  127 (172)
                      |.|+|+++++++|+++|+++..+ +.. ..+|.+.+|+  +|||||+|||++..+.
T Consensus        85 f~V~Did~~~~~l~~~G~~~~~~~~~~-~~~g~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           85 IGVKSIEERIQEVKENGVQMINDEPVP-GARGAQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EECSCHHHHHHHHHHTTCCBSCSSCEE-CGGGCEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             EEECCHHHHHHHHHHCCCEecccCccc-CCCCcEEEEEeccCCCeEEEEEEecCCc
Confidence            99999999999999999998776 443 2234466777  4999999999996554

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.86  E-value=8.8e-21  Score=130.53  Aligned_cols=122  Identities=19%  Similarity=0.272  Sum_probs=88.5

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC--------------CcceEEEEeC-C-eeEEEeecCCCCcc---
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF--------------NFEGAWLFNH-G-IGIHLLESDKAPEK---   62 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--------------~~~~~~~~~~-~-~~l~l~~~~~~~~~---   62 (172)
                      ++++|+|+.|.|+|++++++||++ ||+++......              .....++... + ..++++........   
T Consensus         8 ~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~   86 (153)
T 1ss4_A            8 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADH   86 (153)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBC
T ss_pred             cccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCcccc
Confidence            457899999999999999999999 99998754211              1122333322 2 56777764211110   


Q ss_pred             --cCCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           63 --RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        63 --~~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                        ......+..|++|.|+|+++++++|+++|+++..++.... +|.+.+|++|||||.|||++..
T Consensus        87 ~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           87 RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE-NSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEET-TTEEEEEEECGGGCEEEEEEEC
T ss_pred             cCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccC-CceEEEEEECCCCCEEEEEecc
Confidence              1112345569999999999999999999999987765433 4568899999999999999854

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.86  E-value=4.2e-20  Score=124.57  Aligned_cols=120  Identities=18%  Similarity=0.245  Sum_probs=87.9

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC---CcceEEEEeC----CeeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF---NFEGAWLFNH----GIGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~---~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      ++|+|+.|.|+|++++++||+++||+++......   .....++..+    +..+++........  .....+..|++|.
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~   78 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK--YELGTAYGHIALS   78 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCC--CCCCSSEEEEEEE
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCc--ccCCCCccEEEEE
Confidence            4689999999999999999999999998765321   1123344333    35577765432211  1223466799999


Q ss_pred             eCCHHHHHHHHHhCCCeEeeceeecCCee-EEEEEEECCCCCEEEEEeecC
Q 042945           77 CSDMKLVMRKLEEMNIEYETAVVDEGGIQ-VDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        77 v~dl~~~~~~l~~~G~~i~~~~~~~~~~g-~~~~~~~DPdG~~iei~~~~~  126 (172)
                      |+|+++++++|+++|+++..++.... +| .+.+|++|||||.|||++..+
T Consensus        79 v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           79 VDNAAEACEKIRQNGGNVTREAGPVK-GGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             CSCHHHHHHHHHHTTCEEEEEEEECT-TSCCEEEEEECTTSCEEEEEEC--
T ss_pred             eCCHHHHHHHHHHCCCEEecCCccCC-CCceeEEEEECCCCCEEEEEecCC
Confidence            99999999999999999988775543 33 367999999999999998543

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.86  E-value=1.2e-20  Score=129.84  Aligned_cols=118  Identities=17%  Similarity=0.178  Sum_probs=87.6

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCc-ceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCC
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNF-EGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSD   79 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d   79 (172)
                      |+++++. +.|.|+|++++++||+++||++...+..... .......++  ++++........    ..+..|++|.|+|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~----~~~~~hl~f~V~d   75 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIST--ILLIAGSEEALK----PFRNTQATFLVDS   75 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEETT--EEEEESCHHHHG----GGGGCCEEEEESC
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEecc--EEEecCCcccCC----CCcceEEEEEeCC
Confidence            5678888 9999999999999999999999877643221 122222222  455544311111    1245899999999


Q ss_pred             HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           80 MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      +++++++|+++|+++..++.... +| +.+|++|||||.|||++..+.
T Consensus        76 ~d~~~~~l~~~G~~v~~~p~~~~-~G-~~~~~~DPdG~~iel~~~~~~  121 (144)
T 3r6a_A           76 LDKFKTFLEENGAEIIRGPSKVP-TG-RNMTVRHSDGSVIEYVEHSKI  121 (144)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEET-TE-EEEEEECTTSCEEEEEEECC-
T ss_pred             HHHHHHHHHHcCCEEecCCccCC-Cc-eEEEEECCCCCEEEEEEcCCc
Confidence            99999999999999988776554 45 789999999999999997664

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.85  E-value=3.1e-20  Score=125.20  Aligned_cols=116  Identities=19%  Similarity=0.350  Sum_probs=87.1

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCc----ceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEe-
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNF----EGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQC-   77 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v-   77 (172)
                      +++|+|+.|.|+|++++++||+++||+++........    ...++..++..+++......      ...+..|++|.| 
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------~~~~~~h~~~~v~   75 (133)
T 2p7o_A            2 ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSL------QERTYNHIAFQIQ   75 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECSSC------CCCCSCEEEEECC
T ss_pred             CceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCCCC------CCCCeeEEEEEcC
Confidence            6889999999999999999999999999876531110    00145455666777654321      134678999999 


Q ss_pred             -CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           78 -SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        78 -~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                       +|+++++++|+++|+++..++....+ +.+.+|++|||||.|||++..
T Consensus        76 ~~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           76 SEEVDEYTERIKALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             GGGHHHHHHHHHHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSS
T ss_pred             HHHHHHHHHHHHHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCC
Confidence             49999999999999999887654332 347899999999999999743

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.85  E-value=1.9e-20  Score=127.51  Aligned_cols=115  Identities=17%  Similarity=0.302  Sum_probs=86.9

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCc-c---eEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNF-E---GAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS   78 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~---~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~   78 (172)
                      +++|+|+.|.|+|++++++||+++||+++..+..... .   ..++..++..+++......+      ..+..|++|.|+
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~------~~~~~h~~~~v~   75 (139)
T 1r9c_A            2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA------ERSYNHIAFKID   75 (139)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCS------SCCSCEEEEECC
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECCEEEEEEeCCCCC------CCCeeEEEEEcC
Confidence            6899999999999999999999999999887532110 0   01455566677777543211      346789999999


Q ss_pred             --CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           79 --DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        79 --dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                        |+++++++|.++|+++..++.... ++.+.+|++|||||.|||++.
T Consensus        76 ~~d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           76 DADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             GGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             HHHHHHHHHHHHHCCCcccCCcccCC-CCeEEEEEECCCCCEEEEEeC
Confidence              999999999999999887654332 345789999999999999973

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.85  E-value=4e-20  Score=122.38  Aligned_cols=115  Identities=14%  Similarity=0.150  Sum_probs=85.4

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHH
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKL   82 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~   82 (172)
                      .+++.|+.|.|+|++++++||+++||+++....+   ...++..++..+.+......+   ....+...|++|.|+|+++
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~---~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~~~~~v~d~~~   76 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND---GFAQFTIGSHCLMLSQNHLVP---LENFQSGIIIHIEVEDVDQ   76 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET---TEEEEEETTEEEEEESSCSSS---CCCCCSCEEEEEECSCHHH
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC---CEEEEEeCCeEEEEEcCCCCC---cccCCCeEEEEEEECCHHH
Confidence            3689999999999999999999999999875422   233444455555443221111   1112234689999999999


Q ss_pred             HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           83 VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        83 ~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      ++++|+++|+++..+|.... +|.+.+|++|||||.|||++.
T Consensus        77 ~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           77 NYKRLNELGIKVLHGPTVTD-WGTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             HHHHHHHHTCCEEEEEEECT-TSCEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHHHCCCceecCCcccc-CccEEEEEECCCccEEEEEec
Confidence            99999999999887776543 456889999999999999974

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.85  E-value=1.5e-19  Score=122.27  Aligned_cols=118  Identities=14%  Similarity=0.215  Sum_probs=87.1

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC---C
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS---D   79 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~---d   79 (172)
                      .++|+||.|.|+|++++++||+++||+++....+   ....+...+..+.+....... .+  ...+..|++|.+.   |
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~---~~~~~~~~g~~~~l~~~~~~~-~~--~~~~~~h~~~~~~~~~d   80 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP---DRITLDFFGDQLVCHLSDRWD-RE--VSMYPRHFGITFRDKKH   80 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET---TEEEEEETTEEEEEEECSCSC-SS--CCSSSCEEEEECSSHHH
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC---CcEEEEEeCCEEEEEEcCccc-cc--CCCCCCeEEEEEcChHh
Confidence            4789999999999999999999999999976532   222333344445554433221 11  2345679999885   6


Q ss_pred             HHHHHHHHHhCCCeEeeceeec--C-CeeEEEEEEECCCCCEEEEEeecC
Q 042945           80 MKLVMRKLEEMNIEYETAVVDE--G-GIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~--~-~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +++++++|+++|+++..+|...  . .++.+.+|++|||||.|||+++.+
T Consensus        81 ~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           81 FDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESS
T ss_pred             HHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECC
Confidence            9999999999999988777553  2 234578999999999999998754

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.85  E-value=6e-20  Score=126.51  Aligned_cols=122  Identities=15%  Similarity=0.132  Sum_probs=85.3

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecC-----CCCcccCCCCCCcceEEEEe
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESD-----KAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-----~~~~~~~~~~~g~~~v~~~v   77 (172)
                      ..+|.||+|.|+|+++|++||++ ||+........+....+....+..+.+....     ...........+..|++|.|
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v   85 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDESCACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIVCVSA   85 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTTEEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEEEEEC
T ss_pred             CccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCceeEEeecCcceEeeeccccccccccccCCCCCCCCeeEEEEEe
Confidence            47899999999999999999998 5555444322222233333444444444321     11111122344567999999


Q ss_pred             C---CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           78 S---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        78 ~---dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      +   +++++++++.+.|+++..+|.+.. + .+++||+|||||+|||+++.+.
T Consensus        86 ~~~~~vd~~~~~~~~~g~~~~~~p~~~~-~-~~~~~f~DPDGn~iEi~~~~p~  136 (149)
T 4gym_A           86 IDRDDVDRFADTALGAGGTVARDPMDYG-F-MYGRSFHDLDGHLWEVMWMSAE  136 (149)
T ss_dssp             SSHHHHHHHHHHHHHTTCEECSCCEECS-S-EEEEEEECTTCCEEEEEEECTT
T ss_pred             ccHHHHHHHHHHHHhcCceeeccccccC-C-EEEEEEEcCCCCEEEEEEEChh
Confidence            6   688999999999999998887654 3 3889999999999999987664

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.85  E-value=1.2e-20  Score=130.17  Aligned_cols=120  Identities=15%  Similarity=0.147  Sum_probs=91.1

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCC---CcccCCCCCCcceEEEEe
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKA---PEKRGKINPKDNHISFQC   77 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~g~~~v~~~v   77 (172)
                      |++++|.|+.|.|+|++++++||+++||+++....   ....++..++..+.+......   ...+.....+..|++|.|
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~f~v   77 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRN---PEIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALAHNV   77 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC---SSEEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEEEEC
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC---CCEEEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEEEEe
Confidence            67789999999999999999999999999987653   234445556667777764311   000111134668999999


Q ss_pred             ---CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           78 ---SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        78 ---~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                         +|+++++++|+++|+++..++.... +|.+.+|++|||||.|||++.
T Consensus        78 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~  126 (150)
T 3bqx_A           78 RAETEVAPLMERLVAAGGQLLRPADAPP-HGGLRGYVADPDGHIWEIAFN  126 (150)
T ss_dssp             SSGGGHHHHHHHHHHTTCEEEEEEECCT-TSSEEEEEECTTCCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHCCCEEecCCcccC-CCCEEEEEECCCCCEEEEEeC
Confidence               8999999999999999988775543 455889999999999999985

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.85  E-value=8.1e-20  Score=122.20  Aligned_cols=114  Identities=14%  Similarity=0.230  Sum_probs=88.6

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCH
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDM   80 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl   80 (172)
                      |+.....|+.|.|+|++++++||+++||+++..+.   ....++..++..+++......      ..++..|++|.|+|+
T Consensus         1 m~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~---~~~~~~~~~~~~l~l~~~~~~------~~~~~~~~~~~v~dv   71 (124)
T 1xrk_A            1 MAKLTSAVPVLTARDVAEAVEFWTDRLGFSRVFVE---DDFAGVVRDDVTLFISAVQDQ------VVPDNTQAWVWVRGL   71 (124)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC---SSEEEEEETTEEEEEEECSCT------TTGGGCEEEEEEECH
T ss_pred             CCcccceeEEEEcCCHHHHHHHHHHccCceEEecC---CCEEEEEECCEEEEEEcCCCC------CCCCceEEEEEECCH
Confidence            55667789999999999999999999999998752   223344456666777654321      123447999999999


Q ss_pred             HHHHHHHHhC------CC--eEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           81 KLVMRKLEEM------NI--EYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        81 ~~~~~~l~~~------G~--~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      ++++++|+++      |+  ++..++.... +| +.+|++|||||.|||++..
T Consensus        72 ~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~-~g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           72 DELYAEWSEVVSTNFRDASGPAMTEIVEQP-WG-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             HHHHHHHTTTSBSCTTTCSSCEECCCEEET-TE-EEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHHHHhcccccCCccccccCCceecC-CC-CEEEEECCCCCEEEEEEec
Confidence            9999999999      99  8887776544 56 8999999999999999853

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.85  E-value=2.3e-20  Score=123.57  Aligned_cols=112  Identities=16%  Similarity=0.215  Sum_probs=84.6

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC---CeeEEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH---GIGIHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      |+++++ |+.|.|+|++++.+||+++||++.....   ....++...   +..+.+.....       ..++..|++|.|
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~---~~~~~~~~~~~~~~~l~l~~~~~-------~~~~~~~~~~~v   72 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMDH---GWIVTHASPLEAHAQVSFAREGG-------SGTDVPDLSIEV   72 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC---SSEEEEEEEEEEEEEEEEESSSB-------TTBCCCSEEEEE
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC---CEEEEEecCCCCcEEEEEEcCCC-------CCCceeEEEEEE
Confidence            678899 9999999999999999999999987652   122223222   22344433211       123457999999


Q ss_pred             CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           78 SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        78 ~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +|+++++++|+++|+++..++.... +|.+.+|++|||||.|||++.
T Consensus        73 ~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           73 DNFDEVHARILKAGLPIEYGPVTEA-WGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             SCHHHHHHHHHHTTCCCSEEEEECT-TSCEEEEEECTTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCccccCCccCC-CccEEEEEECCCCCEEEEEec
Confidence            9999999999999999887776543 456889999999999999974

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.85  E-value=8.2e-21  Score=132.62  Aligned_cols=122  Identities=13%  Similarity=0.209  Sum_probs=91.2

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCC------cccCCCCCCcceEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP------EKRGKINPKDNHIS   74 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~g~~~v~   74 (172)
                      |++.+|+||.|.|+|++++++||+++||+++..+..  ....++..++..+.++......      ..+.....+..|++
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~hi~   81 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLP--GQLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQGHFC   81 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEET--TTEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEECEEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CcEEEEeCCCEEEEEEecCCccCccccCCCCcCCCcceeEEE
Confidence            467899999999999999999999999999987642  2345555566666665432110      11111233558999


Q ss_pred             EEe---CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           75 FQC---SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        75 ~~v---~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      |.|   +|+++++++|+++|+++..++....  +.+.+|++|||||.|||++...
T Consensus        82 f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~--g~~~~~~~DPdG~~iel~~~~~  134 (160)
T 3r4q_A           82 FYADDKAEVDEWKTRFEALEIPVEHYHRWPN--GSYSVYIRDPAGNSVEVGEGKL  134 (160)
T ss_dssp             EEESSHHHHHHHHHHHHTTTCCCCEEEECTT--SCEEEEEECTTCCEEEEEEGGG
T ss_pred             EEeCCHHHHHHHHHHHHHCCCEEeccccccC--CcEEEEEECCCCCEEEEEeCCC
Confidence            999   8999999999999999876553322  3588999999999999998543

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.85  E-value=3.6e-20  Score=126.88  Aligned_cols=117  Identities=21%  Similarity=0.351  Sum_probs=86.5

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC---CcceEEEEeC----CeeEEEeecCCCCcccCCCCCCcceE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF---NFEGAWLFNH----GIGIHLLESDKAPEKRGKINPKDNHI   73 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~---~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~g~~~v   73 (172)
                      |++++|+|+.|.|+|++++++||+++||+++..+.+.   .....++..+    +..+++........  .....+..|+
T Consensus         4 m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~h~   81 (144)
T 2c21_A            4 MPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS--YKHDEAYGHI   81 (144)
T ss_dssp             --CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCC--CCCCSSEEEE
T ss_pred             CccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCC--CCCCCCceEE
Confidence            6789999999999999999999999999999765321   1122444433    25677776543211  1223466899


Q ss_pred             EEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEE-EEECCCCCEEEEEeec
Q 042945           74 SFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQL-FFHDPDGYMIEICNCQ  125 (172)
Q Consensus        74 ~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~-~~~DPdG~~iei~~~~  125 (172)
                      +|.|+|+++++++|+++|+++..+    .  |.+.+ |++|||||.|||++..
T Consensus        82 ~f~v~d~~~~~~~l~~~G~~~~~~----~--g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           82 AIGVEDVKELVADMRKHDVPIDYE----D--ESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEE----C--SSSSEEEEECTTSCEEEEEEHH
T ss_pred             EEEeCCHHHHHHHHHHCCCEEecc----C--CcEEEEEEECCCCCEEEEEEcC
Confidence            999999999999999999998764    2  22445 9999999999999853

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.84  E-value=1e-19  Score=125.64  Aligned_cols=119  Identities=19%  Similarity=0.209  Sum_probs=87.2

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEe-CCeeEEEeecCCCCcccCCCCCCcceEEEEeCC--
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFN-HGIGIHLLESDKAPEKRGKINPKDNHISFQCSD--   79 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d--   79 (172)
                      +++|.||.|.|+|++++++||+++||+++....+   ...++.. ++..+.++........ ....++..|++|.|+|  
T Consensus         4 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~~~~~~~~~g~~l~l~~~~~~~~~-~~~~~~~~~l~f~v~d~~   79 (148)
T 3rhe_A            4 LSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP---TFAMFVMKTGLRLGLWAQEEIEPK-AHQTGGGMELSFQVNSNE   79 (148)
T ss_dssp             ---CEEEEEEESCHHHHHHHHHHHHTCCCSEECS---SEEEEECTTSCEEEEEEGGGCSSC-CC----CEEEEEECSCHH
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC---CEEEEEcCCCcEEEEecCCcCCcc-ccCCCCeEEEEEEcCCHH
Confidence            5789999999999999999999999999876531   2333433 5666777654322211 1224456899999987  


Q ss_pred             -HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           80 -MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        80 -l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                       +++++++|+++|+++..++.... +| +.+|++|||||.|||++..+.
T Consensus        80 dvd~~~~~l~~~G~~i~~~p~~~~-~G-~~~~~~DPdG~~iel~~~~~~  126 (148)
T 3rhe_A           80 MVDEIHRQWSDKEISIIQPPTQMD-FG-YTFVGVDPDEHRLRIFCLKRT  126 (148)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEEET-TE-EEEEEECTTCCEEEEEEEC--
T ss_pred             HHHHHHHHHHhCCCEEEeCCeecC-CC-cEEEEECCCCCEEEEEEcChh
Confidence             99999999999999988776554 45 889999999999999997664

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.84  E-value=1.4e-19  Score=122.63  Aligned_cols=112  Identities=23%  Similarity=0.362  Sum_probs=88.7

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC--CH
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS--DM   80 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~--dl   80 (172)
                      +++|+|+.|.|+|++++++||+++||+++....+   ...++..++..+.+......    .....+..|++|.|+  |+
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~~~~~~~~~~~l~l~~~~~~----~~~~~~~~h~~~~v~~~d~   74 (135)
T 1nki_A            2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD---QGAYLELGSLWLCLSREPQY----GGPAADYTHYAFGIAAADF   74 (135)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---TEEEEEETTEEEEEEECTTC----CCCCSSSCEEEEEECHHHH
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC---CceEEecCCEEEEEEeCCCC----CCCCCCcceEEEEccHHHH
Confidence            6899999999999999999999999999886531   34556566666777654321    122446789999997  99


Q ss_pred             HHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           81 KLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        81 ~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      ++++++|+++|+++..++..    +.+.+|++|||||.|||++..
T Consensus        75 ~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           75 ARFAAQLRAHGVREWKQNRS----EGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             HHHHHHHHHTTCCEEECCCS----SSCEEEEECTTCCEEEEESCC
T ss_pred             HHHHHHHHHCCCceecCCCC----CeEEEEEECCCCCEEEEEECC
Confidence            99999999999998876532    237799999999999999743

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.84  E-value=4.9e-20  Score=127.23  Aligned_cols=118  Identities=10%  Similarity=0.220  Sum_probs=85.1

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCc----ccCCCCCCcceEEEEeCC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPE----KRGKINPKDNHISFQCSD   79 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~g~~~v~~~v~d   79 (172)
                      .+|.|+.|.|+|++++++||+++||+++....  +....++..++..++++.......    .......+ .|++|.|+|
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g-~~l~f~v~d  100 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEIP--DMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTT-PVVTVDVES  100 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEET--TTTEEEEECSCBCTTSSBCSSSCBCEEEEESSSSCS-CEEEEECSC
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEECC--CCCEEEEEeCCcceeecccCCcccccceeecCCCCe-EEEEEEcCC
Confidence            58999999999999999999999999988742  123344444433322222111100    00000123 599999999


Q ss_pred             HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           80 MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      +++++++|+++|+++..++....++| +.+|++|||||.|||++..
T Consensus       101 ld~~~~~l~~~G~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A          101 IESALERIESLGGKTVTGRTPVGNMG-FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEETTTE-EEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHHHcCCeEecCCeecCCCE-EEEEEECCCCCEEEEEecC
Confidence            99999999999999988776655455 8899999999999999864

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.84  E-value=1.2e-19  Score=123.87  Aligned_cols=115  Identities=23%  Similarity=0.376  Sum_probs=89.6

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC--CH
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS--DM   80 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~--dl   80 (172)
                      +++|+||.|.|+|++++++||+++||+++..+.+   ...++..++..+.+....... .......+..|++|.|+  |+
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~~~hi~~~v~~~d~   77 (141)
T 1npb_A            2 LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN---TGAYLTCGDLWVCLSYDEARQ-YVPPQESDYTHYAFTVAEEDF   77 (141)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET---TEEEEEETTEEEEEEECTTCC-CCCGGGSCSCEEEEECCHHHH
T ss_pred             CceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC---CcEEEEECCEEEEEEECCCCC-CCCCCCCCceEEEEEeCHHHH
Confidence            6899999999999999999999999999987632   245566666677776654221 11122456789999996  99


Q ss_pred             HHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           81 KLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        81 ~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      ++++++|+++|+++..++..    +.+.+|++|||||.|||++..
T Consensus        78 ~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           78 EPLSQRLEQAGVTIWKQNKS----EGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             HHHHHHHHHTTCCEEECCCS----SSEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHCCCeEeccCCC----ceeEEEEECCCCCEEEEEECc
Confidence            99999999999998876532    237899999999999999853

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.84  E-value=2e-20  Score=130.22  Aligned_cols=120  Identities=17%  Similarity=0.157  Sum_probs=91.4

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC-----------------CCcceEEEEeCCeeEEEeecCCCCcccC
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-----------------FNFEGAWLFNHGIGIHLLESDKAPEKRG   64 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-----------------~~~~~~~~~~~~~~l~l~~~~~~~~~~~   64 (172)
                      .+++|+||+|.|+|++++++||+++||+++..+..                 ......++..++..+++++....+....
T Consensus        16 ~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~~~~~~~   95 (159)
T 3gm5_A           16 DMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENPSTWR   95 (159)
T ss_dssp             CGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECSSSCHHH
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECCCCChhH
Confidence            46889999999999999999999999998764321                 1122344555677888887653221100


Q ss_pred             ----CCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCC--CCEEEEEee
Q 042945           65 ----KINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPD--GYMIEICNC  124 (172)
Q Consensus        65 ----~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPd--G~~iei~~~  124 (172)
                          ..+.|..|+||.|+|+++++++|+++|+++...+.. .  |.+.+|++|||  |++|||++.
T Consensus        96 ~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~-~--g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           96 EFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF-E--GGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE-T--TEEEEEESCHHHHSSEEEEEEE
T ss_pred             HHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeecccc-C--CeeEEEEeccccCcEEEEEEec
Confidence                124577899999999999999999999998776532 2  35889999999  999999984

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.83  E-value=6.1e-20  Score=124.85  Aligned_cols=120  Identities=16%  Similarity=0.176  Sum_probs=88.6

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEe-CCeeEEEeecCC----CCcccCCCCCCcceEEEEe
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFN-HGIGIHLLESDK----APEKRGKINPKDNHISFQC   77 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~----~~~~~~~~~~g~~~v~~~v   77 (172)
                      +++|.|+.|.|+|++++++||++ ||+++..+.+. .....+.. ++..+.+.....    .+.......++..|++|.|
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~f~v   79 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADS-APHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFEF   79 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGG-CSEEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEEEEC
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCC-CceEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEEEEEe
Confidence            37899999999999999999998 99998765311 11222322 455676665321    0100112235678999999


Q ss_pred             C---CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           78 S---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        78 ~---dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      +   |+++++++|+++|+++..++.... +|.+.+|++|||||.|||++..
T Consensus        80 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           80 PDTASVDKKYAELVDAGYEGHLKPWNAV-WGQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEET-TTEEEEEEECTTCCEEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHCCCceeeCCcccC-CCcEEEEEECCCCCEEEEEeCC
Confidence            9   999999999999999987776543 4568899999999999999876

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.83  E-value=1.3e-19  Score=124.66  Aligned_cols=120  Identities=18%  Similarity=0.212  Sum_probs=89.9

Q ss_pred             CCcceeceEEEEeCCHHHHHHHH---HHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCC-Cccc-CCCCCCcceEEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFY---EQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKA-PEKR-GKINPKDNHISF   75 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY---~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~-~~~~~g~~~v~~   75 (172)
                      +.+.+|.|+.|.|+|++++++||   +++||+++..+.+.  ...|.. ++..+.++..... ...+ .....+..|++|
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~--~~~~~~-g~~~l~l~~~~~~~~~~~~~~~~~g~~hi~f   92 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR--GKSYKH-GKTYLVFVQTEDRFQTPTFHRKRTGLNHLAF   92 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT--EEEEEE-TTEEEEEEECCGGGSCSCCCTTSSSCCEEEE
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC--CceEec-CCeEEEEEEcCCCcccccccccCCCceEEEE
Confidence            35689999999999999999999   99999999876422  224555 6667777765421 1011 112346689999


Q ss_pred             EeC---CHHHHHHHHHhCCCeEee-ceeec-CCeeEEEEEEECCCCCEEEEEe
Q 042945           76 QCS---DMKLVMRKLEEMNIEYET-AVVDE-GGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        76 ~v~---dl~~~~~~l~~~G~~i~~-~~~~~-~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      .|+   |+++++++|+++|+++.. .|... .+++.+.+|++|||||.|||++
T Consensus        93 ~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~  145 (146)
T 3ct8_A           93 HAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVA  145 (146)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEEC
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEe
Confidence            999   999999999999999887 34322 2334578999999999999986

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.83  E-value=6.9e-19  Score=120.01  Aligned_cols=120  Identities=16%  Similarity=0.084  Sum_probs=85.1

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeec-----CCCCcccCCCCCCcceEEEEeC-
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLES-----DKAPEKRGKINPKDNHISFQCS-   78 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~-----~~~~~~~~~~~~g~~~v~~~v~-   78 (172)
                      ++.|+.|.|+|++++++||+++||+++..+... ....++..++..+.+...     ............+ .|++|.|+ 
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~~~f~v~~   85 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRS-PIFRGLDTGKSCIGFNAHEAYELMQLAQFSETSGIK-FLLNFDVDT   85 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCB-TTEEEEECSSSEEEEECTHHHHHTTCGGGCCCBSCC-EEEEEECSC
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCC-CceEEeecCCEEEEEcCccccccccccccCCCCCCe-EEEEEEcCC
Confidence            799999999999999999999999998754211 112233334455555331     1111111112223 59999999 


Q ss_pred             --CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           79 --DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        79 --dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                        |+++++++|+++|+++..+|.... +|.+.+|++|||||.|||++....
T Consensus        86 ~~dv~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~~~  135 (141)
T 2rbb_A           86 KEAVDKLVPVAIAAGATLIKAPYETY-YHWYQAVLLDPERNVFRINNVLEG  135 (141)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEEEECT-TSEEEEEEECTTSCEEEEEEEC--
T ss_pred             HHHHHHHHHHHHHcCCeEecCccccC-CccEEEEEECCCCCEEEEEEcccc
Confidence              599999999999999888776543 456899999999999999987654

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.83  E-value=5.1e-20  Score=126.02  Aligned_cols=122  Identities=14%  Similarity=0.269  Sum_probs=89.0

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC---CCcceEEEEeCC------eeEEEeecCCCCccc----CCCC-
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS---FNFEGAWLFNHG------IGIHLLESDKAPEKR----GKIN-   67 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~------~~l~l~~~~~~~~~~----~~~~-   67 (172)
                      ++++|+|+.|.|+|++++++||+++||++......   .+....++..++      ..+++++........    .... 
T Consensus         6 m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~   85 (148)
T 1jc4_A            6 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNG   85 (148)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTT
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCC
Confidence            35789999999999999999999999999976531   122234444444      567888754322110    0112 


Q ss_pred             -CCcceEEEEeCCHHHHHHHHHhCCCeEe-eceeecCCeeEEEEEE--ECCCCCEEEEEee
Q 042945           68 -PKDNHISFQCSDMKLVMRKLEEMNIEYE-TAVVDEGGIQVDQLFF--HDPDGYMIEICNC  124 (172)
Q Consensus        68 -~g~~~v~~~v~dl~~~~~~l~~~G~~i~-~~~~~~~~~g~~~~~~--~DPdG~~iei~~~  124 (172)
                       .+..|++|.|+|+++++++|+++|+++. ..|.. ..+|.+.+|+  +|||||.|||++.
T Consensus        86 ~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~-~~~g~~~~~~~~~DPdG~~iel~~~  145 (148)
T 1jc4_A           86 RAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKL-GTGGNRINFMHPKSGKGVLIELTQY  145 (148)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEE-CSSSCEEEEBCGGGGTTSCEEEEEC
T ss_pred             CCceEEEEEECCCHHHHHHHHHHCCCeecCcCccc-CCCceEEEEEeecCCCcEEEEEEec
Confidence             4668999999999999999999999987 44543 2334466677  9999999999985

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.82  E-value=1.5e-18  Score=117.72  Aligned_cols=118  Identities=14%  Similarity=0.100  Sum_probs=86.0

Q ss_pred             ceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcc--eEEEEeCCeeEEEeecCCCCcccCCCCCCcc-eEEEEeCCHHHH
Q 042945            7 NHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFE--GAWLFNHGIGIHLLESDKAPEKRGKINPKDN-HISFQCSDMKLV   83 (172)
Q Consensus         7 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~--~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~-~v~~~v~dl~~~   83 (172)
                      ..+.|.|+|++++++||+++||+++..+......  ...+..++..+.+......... ....+... |++|.|+|++++
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~g~~~~~~l~~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~v~dv~~~   82 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRHADLDTGGGIVMVRRTGEPYTV-SCAGGHTCKQVIVWVSDVDEH   82 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSSSSCSEEEEECSSSEEEEEETTCCSSC-EECCCCCCCEEEEEESCHHHH
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCCCcEEEEEEecCCeEEEEEecCCCcCc-cCCCCCcEEEEEEEeCCHHHH
Confidence            4689999999999999999999999875322221  2233345566666554322111 11122335 999999999999


Q ss_pred             HHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           84 MRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        84 ~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +++|+++|+++..++.... +|.+.++++|||||.|||++..+
T Consensus        83 ~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           83 FMRSTAAGADIVQPLQDKP-WGLRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             HHHHHHTTCEEEEEEEEET-TTEEEEEEECSSSCEEEEEECC-
T ss_pred             HHHHHHcCCeeccCccccC-CCcEEEEEECCCCCEEEEEEEcC
Confidence            9999999999988776544 45689999999999999998654

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.82  E-value=7.4e-19  Score=119.08  Aligned_cols=121  Identities=17%  Similarity=0.184  Sum_probs=84.1

Q ss_pred             CCcceec--eEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC
Q 042945            1 MPILSLN--HVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS   78 (172)
Q Consensus         1 m~~~~i~--hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~   78 (172)
                      |.++++.  +..|.|+|++++++||+++||+++..+.+   ...++..++..+++.........  +...+..|++|.|+
T Consensus         1 M~~~~~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~~l~~~~~~l~l~~~~~~~~~--~~~~~~~~l~~~v~   75 (134)
T 3fcd_A            1 MSLSDIHQITPFLHIPDMQEALTLFCDTLGFELKYRHS---NYAYLELSGCGLRLLEEPARKII--PDGIARVAICIDVS   75 (134)
T ss_dssp             -----CCEEEEEEEESCHHHHHHHHTTTTCCEEEEEET---TEEEEEETTEEEEEEECCCC-----------EEEEEECS
T ss_pred             CchhhhhcceeEEEECCHHHHHHHHHhccCcEEEEeCC---CeEEEEECCEEEEEEeCCCCCcC--CCCCceEEEEEEeC
Confidence            4443333  45899999999999999999999987632   24555566777877776532211  11234579999999


Q ss_pred             CHHHHHHHHHhCC----CeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           79 DMKLVMRKLEEMN----IEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        79 dl~~~~~~l~~~G----~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      |+++++++|+++|    +++..++... +||.+.++++|||||.|||.+....
T Consensus        76 dv~~~~~~l~~~g~~~g~~i~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~~~  127 (134)
T 3fcd_A           76 DIDSLHTKLSPALENLPADQVEPLKNM-PYGQREFQVRMPDGDWLNFTAPLAE  127 (134)
T ss_dssp             CHHHHHHHHHHHHTTSCGGGEEEEEEC-TTSEEEEEEECTTSCEEEEEEECCT
T ss_pred             CHHHHHHHHHhcCCccCCccccCCccc-CCCcEEEEEECCCCCEEEEEEcccc
Confidence            9999999999654    4566666543 4567899999999999999997654

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.82  E-value=3.3e-19  Score=118.87  Aligned_cols=113  Identities=14%  Similarity=0.126  Sum_probs=86.9

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCH
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDM   80 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl   80 (172)
                      |+...-.++.|.|+|++++++||+++||+++....   ....++..++..+++......+      .++..|++|.|+|+
T Consensus         1 m~~~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~~~v~dv   71 (122)
T 1qto_A            1 MVKFLGAVPVLTAVDVPANVSFWVDTLGFEKDFGD---RDFAGVRRGDIRLHISRTEHQI------VADNTSAWIEVTDP   71 (122)
T ss_dssp             CCCCCCCCCEEEESSHHHHHHHHHHTTCCEEEEEC---SSEEEEEETTEEEEEEECSCHH------HHTTCEEEEEESCH
T ss_pred             CCcccceeEEEEcCCHHHHHHHHHhccCcEEeeCC---CCEEEEEECCEEEEEEcCCCCC------CCCceEEEEEECCH
Confidence            44444568999999999999999999999998652   2234445566677776543211      12347999999999


Q ss_pred             HHHHHHHHhC------CC--eEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           81 KLVMRKLEEM------NI--EYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        81 ~~~~~~l~~~------G~--~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      ++++++|+++      |+  ++..++.... +| +.++++|||||.|||++.
T Consensus        72 d~~~~~l~~~~~~~~~G~~~~~~~~~~~~~-~g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           72 DALHEEWARAVSTDYADTSGPAMTPVGESP-AG-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHTTTSCSCTTCTTSCEECCCEEET-TE-EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHhhccccccCccccccCCCcCCC-CC-cEEEEECCCCCEEEEecC
Confidence            9999999999      99  8877665543 56 889999999999999973

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.82  E-value=3.3e-19  Score=127.12  Aligned_cols=122  Identities=24%  Similarity=0.371  Sum_probs=87.2

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC---CCcceEEEEeC-------------------CeeEEEeecCCCC
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS---FNFEGAWLFNH-------------------GIGIHLLESDKAP   60 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~~~-------------------~~~l~l~~~~~~~   60 (172)
                      ..+|+||.|.|+|++++++||+++|||++..+..   ......++...                   +..++++......
T Consensus        32 ~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  111 (187)
T 3vw9_A           32 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTE  111 (187)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGG
T ss_pred             eeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCC
Confidence            3689999999999999999999999999987532   11222233222                   2456665432111


Q ss_pred             c---cc----CCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           61 E---KR----GKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        61 ~---~~----~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      .   ..    .....+..|++|.|+|+++++++|+++|+++..++.... ++ +.+|++|||||.|||++...
T Consensus       112 ~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~-~~-~~~~~~DPdG~~iel~~~~~  182 (187)
T 3vw9_A          112 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGK-MK-GLAFIQDPDGYWIEILNPNK  182 (187)
T ss_dssp             GCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSS-ST-TCEEEECTTCCEEEEECGGG
T ss_pred             CCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCC-cc-eEEEEECCCCCEEEEEEccc
Confidence            0   00    112246679999999999999999999999988765432 32 45899999999999998543

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.81  E-value=2.5e-19  Score=127.56  Aligned_cols=123  Identities=24%  Similarity=0.375  Sum_probs=87.8

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC---cceEEEEe-------------------CCeeEEEeecCCC
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN---FEGAWLFN-------------------HGIGIHLLESDKA   59 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~---~~~~~~~~-------------------~~~~l~l~~~~~~   59 (172)
                      .+++|+|+.|.|+|++++++||+++|||++..+....   ....++..                   .+..++++.....
T Consensus        28 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~  107 (184)
T 2za0_A           28 KDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGT  107 (184)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTG
T ss_pred             cceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCC
Confidence            4679999999999999999999999999987653111   11122221                   2356777654321


Q ss_pred             ---Cccc---C-CCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           60 ---PEKR---G-KINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        60 ---~~~~---~-~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                         +...   . ....+..|++|.|+|+++++++|+++|+++..++.... + .+.+|++|||||.|||++...
T Consensus       108 ~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~-~-~~~~~~~DPdG~~iel~~~~~  179 (184)
T 2za0_A          108 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGK-M-KGLAFIQDPDGYWIEILNPNK  179 (184)
T ss_dssp             GGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSS-S-TTCEEEECTTCCEEEEECTTT
T ss_pred             CCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCC-c-eeEEEEECCCCCEEEEEecCc
Confidence               1000   0 11246689999999999999999999999987665432 2 256999999999999998544

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.81  E-value=9.4e-20  Score=124.10  Aligned_cols=120  Identities=15%  Similarity=0.266  Sum_probs=85.3

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEE-----eec-CCCCcccCCCCCCcceEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHL-----LES-DKAPEKRGKINPKDNHIS   74 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l-----~~~-~~~~~~~~~~~~g~~~v~   74 (172)
                      |+++++.|+.|.|+|++++++||+++||+++....  + ....+ ..+..++.     ... ............+..|++
T Consensus         4 ~~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~--~-~~~~~-~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (141)
T 2qnt_A            4 FQGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDF--G-SFVLF-ETGFAIHEGRSLEETIWRTSSDAQEAYGRRNMLLY   79 (141)
T ss_dssp             CCSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEEC--S-SEEEE-TTSCEEEEHHHHHHHHHSCCC--CCCSCCSSCEEE
T ss_pred             ccccccceEEEEECCHHHHHHHHHHhcCCEEEEEc--C-CcEEE-eccceeccCchhhhhccccCCccccccCCCceEEE
Confidence            46789999999999999999999999999987653  1 12222 23333331     110 000111112234678999


Q ss_pred             EEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           75 FQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        75 ~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      |.|+|+++++++|++ |+++..++.... +|.+.+|++|||||.|||++..+
T Consensus        80 ~~v~dv~~~~~~l~~-G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           80 FEHADVDAAFQDIAP-HVELIHPLERQA-WGQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             EEESCHHHHHC-CGG-GSCEEEEEEECT-TSCEEEEEECTTCCEEEEEECC-
T ss_pred             EEeCcHHHHHHHHHc-CCccccCCccCC-CCCEEEEEECCCCCEEEEEecch
Confidence            999999999999999 999888776644 45688999999999999998543

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.81  E-value=6.8e-19  Score=120.89  Aligned_cols=116  Identities=10%  Similarity=0.157  Sum_probs=87.9

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC-CeeEEEeecCCCCcccCCCCCCcceEEEEeC---
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH-GIGIHLLESDKAPEKRGKINPKDNHISFQCS---   78 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~---   78 (172)
                      ++++.|+.|.|+|++++++||+++||+++..+.   ....++..+ +..+.++........ .....+..|++|.|+   
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~~~~~hl~f~v~d~~   98 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESS---PTFSLFVLANGMKLGLWSRHTVEPK-ASVTGGGGELAFRVENDA   98 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE---TTEEEEECTTSCEEEEEETTSCSSC-CCCSSSSCEEEEECSSHH
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCC---CCeEEEEcCCCcEEEEEeCCCCCCc-cCCCCCceEEEEEeCCHH
Confidence            358999999999999999999999999987653   122334333 456777654422111 122356789999997   


Q ss_pred             CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           79 DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        79 dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      |+++++++|+++|+++..++.... +| +.+|++|||||.|||++.
T Consensus        99 dv~~~~~~l~~~G~~~~~~~~~~~-~g-~~~~~~DPdG~~iel~~~  142 (144)
T 2kjz_A           99 QVDETFAGWKASGVAMLQQPAKME-FG-YTFTAADPDSHRLRVYAF  142 (144)
T ss_dssp             HHHHHHHHHHHTTCCCCSCCEEET-TE-EEEEECCTTCCEEEEEEE
T ss_pred             HHHHHHHHHHHCCCeEecCceecC-Cc-eEEEEECCCCCEEEEEec
Confidence            589999999999999887776543 45 889999999999999974

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.80  E-value=4.1e-18  Score=114.08  Aligned_cols=111  Identities=16%  Similarity=0.181  Sum_probs=85.1

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHHHHH
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMR   85 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~~~   85 (172)
                      ..++.|.|+|++++++||++ ||+++..+.   ....++..++..+++.......     ..++..|++|.|+|++++++
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~-----~~~~~~~~~~~v~dv~~~~~   74 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFRD---AGWMILQRGDLMLEFFAHPGLD-----PLASWFSCCLRLDDLAEFYR   74 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEEC---SSEEEEEETTEEEEEEECTTCC-----GGGCCCEEEEEESCHHHHHH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEecC---CCEEEEEeCCEEEEEEeCCCCC-----CCCcceEEEEEECCHHHHHH
Confidence            46899999999999999998 999998652   2333444566677776543211     12456899999999999999


Q ss_pred             HHHhCCCeE-------eeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           86 KLEEMNIEY-------ETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        86 ~l~~~G~~i-------~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +|+++|+++       ..+|... ++|.+.++++|||||.|||++...
T Consensus        75 ~l~~~G~~~~~~~~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           75 QCKSVGIQETSSGYPRIHAPELQ-GWGGTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             HHHHTTCCBCSSSSSEEEEEEEC-TTSSEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHCCCccccccCccccCCccc-CcccEEEEEECCCCCEEEEecchh
Confidence            999999984       5556544 356688999999999999998544

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.80  E-value=1e-18  Score=114.60  Aligned_cols=107  Identities=18%  Similarity=0.326  Sum_probs=82.2

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC-CeeEEEeecCCCCcccCCCCCCcceEEEEe---CC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH-GIGIHLLESDKAPEKRGKINPKDNHISFQC---SD   79 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v---~d   79 (172)
                      ++|+|+.|.|+|++++.+||+++||+++.....  ....++... +..+.+......+      .++..|++|.|   +|
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~~~v~~~~d   73 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG--NAFAVMRDNDGFILTLMKGKEVQ------YPKTFHVGFPQESEEQ   73 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET--TTEEEEECTTCCEEEEEECSSCC------CCTTCCEEEECSSHHH
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC--CcEEEEEcCCCcEEEEEeCCCCC------CCceeEEEEEcCCHHH
Confidence            579999999999999999999999999886531  223444333 3556666543211      24678999999   89


Q ss_pred             HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEE
Q 042945           80 MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC  122 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~  122 (172)
                      +++++++|+++|+++.. |... +  .+.+|++|||||.|||+
T Consensus        74 ~~~~~~~l~~~G~~~~~-p~~~-~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           74 VDKINQRLKEDGFLVEP-PKHA-H--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHHHHTTCCCCC-CEEC----CEEEEEEETTTEEEEEE
T ss_pred             HHHHHHHHHHCCCEEec-CcCC-C--cEEEEEECCCCcEEEEe
Confidence            99999999999999765 4433 2  37899999999999997

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.79  E-value=1.3e-18  Score=133.37  Aligned_cols=147  Identities=16%  Similarity=0.153  Sum_probs=89.0

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC----cceEEEEeCCee--EEEeecCCCCcccCCCCCCcceEEE
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN----FEGAWLFNHGIG--IHLLESDKAPEKRGKINPKDNHISF   75 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~~~~~~--l~l~~~~~~~~~~~~~~~g~~~v~~   75 (172)
                      .+.+|+||.|.|+|++++.+||+++||+++.......    ....|+...+..  +.+...        ...++..|++|
T Consensus       148 ~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~Hiaf  219 (309)
T 3hpy_A          148 APIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEY--------PEKGKLHHCSF  219 (309)
T ss_dssp             CCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEEC--------SSTTEEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecC--------CCCCceeEEEE
Confidence            4688999999999999999999999999987653211    123344333221  222221        11235789999


Q ss_pred             EeCCHHH---HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCCCC--CCCCCCCCCcccccccc-cc
Q 042945           76 QCSDMKL---VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVL--PLSSCPLKLPSKRSSEK-AA  149 (172)
Q Consensus        76 ~v~dl~~---~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~  149 (172)
                      .|+|+++   ++++|+++|+++...|......+.+++|++|||||+|||+........  ++..+......+...|| +.
T Consensus       220 ~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g~~~d~~~~~~~w~~~~~~~~~~w~~~~  299 (309)
T 3hpy_A          220 LLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGGYHPYPDYEPLSWTYDNFAQGLDYPQRK  299 (309)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEECCCCCTTSCCEEECTTTC----------
T ss_pred             ECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCCcccCCCcCceECChhcccceeeecCCC
Confidence            9987664   678999999998876655443345789999999999999987544321  22223333445566665 77


Q ss_pred             cchHHHH
Q 042945          150 CSGEVVA  156 (172)
Q Consensus       150 ~~~~~~~  156 (172)
                      .|..+|.
T Consensus       300 ~~~~f~~  306 (309)
T 3hpy_A          300 LHETFMT  306 (309)
T ss_dssp             -------
T ss_pred             CChhHhc
Confidence            7766543

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.79  E-value=6.3e-18  Score=131.23  Aligned_cols=123  Identities=20%  Similarity=0.339  Sum_probs=90.5

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeec-CCCcce---EEEEeC----CeeEEEeecCCCCcccCCCCCCcce
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP-SFNFEG---AWLFNH----GIGIHLLESDKAPEKRGKINPKDNH   72 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~-~~~~~~---~~~~~~----~~~l~l~~~~~~~~~~~~~~~g~~~   72 (172)
                      |++++|+||.|.|+|++++.+||+++||+++..+. ..+...   .++...    +..++++.....+. .....++..|
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~-~~~~~~~~~h   82 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQ-GVIGDGQVGV   82 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCB-CBCCBSEEEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCC-CCCCCCceEE
Confidence            46899999999999999999999999999998763 221111   122211    35677776543321 1112345689


Q ss_pred             EEEEeC--CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCC
Q 042945           73 ISFQCS--DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLP  128 (172)
Q Consensus        73 v~~~v~--dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~  128 (172)
                      ++|.|+  |+++++++|+++|+++..  ....  +.+.+||+|||||.|||++..+..
T Consensus        83 iaf~V~~~dl~~~~~rL~~~Gv~~~~--~~~~--g~~~~~f~DPdGn~iEl~~~~~~~  136 (335)
T 3oaj_A           83 TSYVVPKGAMAFWEKRLEKFNVPYTK--IERF--GEQYVEFDDPHGLHLEIVEREEGE  136 (335)
T ss_dssp             EEEEECTTCHHHHHHHHHHTTCCCEE--EEET--TEEEEEEECTTSCEEEEEECSCSC
T ss_pred             EEEEecHHHHHHHHHHHHhCcceeee--eccC--CcEEEEEECCCCCEEEEEEeCCCC
Confidence            999999  999999999999998875  2222  458899999999999999986643

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.79  E-value=1.1e-18  Score=135.53  Aligned_cols=145  Identities=18%  Similarity=0.212  Sum_probs=100.3

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC--CCcceEEEEeCC--eeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS--FNFEGAWLFNHG--IGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      |.+.+|+||+|.|+|++++.+||+++|||++.....  ......|+..++  ..+.+....      ....++..|++|.
T Consensus       149 ~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~~g~~~~~~l~~~~~~~~l~~~~~~------~~~~~~~~Hiaf~  222 (339)
T 3lm4_A          149 IPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVVDGNVEIGAWMSSNLLGHEVACMRDM------TGGHGKLHHLAFF  222 (339)
T ss_dssp             SCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEEETTEEEEEEEESSSSSCSEEEEECT------TSCCSEEEEEEEE
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEecCCcEEEEEEEeCCCceEEEEeccC------CCCCCceeEEEEE
Confidence            356899999999999999999999999999876532  111233443332  234444321      1123457899999


Q ss_pred             eCC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCCCC----CCCCCCCCCcccccccccc
Q 042945           77 CSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVL----PLSSCPLKLPSKRSSEKAA  149 (172)
Q Consensus        77 v~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  149 (172)
                      |+|   +++++++|+++|+++...|.+....+.+++|++||+||.||++........    ++.........+...||+.
T Consensus       223 v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~~~~p~~~p~~w~~~~~~~~~~wg~~  302 (339)
T 3lm4_A          223 YGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAGYLHLDPDAETKTWQMSDIDTGLAVGGA  302 (339)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCCCCCCSTTCCCEEEEGGGCHHHHCSSSC
T ss_pred             eCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCCeeecCCCCCCeecchhhCCcceEECCC
Confidence            998   888999999999999887765443345789999999999999865544321    1111122234567778887


Q ss_pred             cc
Q 042945          150 CS  151 (172)
Q Consensus       150 ~~  151 (172)
                      .|
T Consensus       303 ~~  304 (339)
T 3lm4_A          303 KL  304 (339)
T ss_dssp             CC
T ss_pred             CC
Confidence            77

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.79  E-value=9.5e-18  Score=114.90  Aligned_cols=118  Identities=16%  Similarity=0.244  Sum_probs=82.7

Q ss_pred             ceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCC------cccCCCCCCcceEEEEeCCH
Q 042945            7 NHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP------EKRGKINPKDNHISFQCSDM   80 (172)
Q Consensus         7 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~g~~~v~~~v~dl   80 (172)
                      ..+.|.|+|+++|++||+++|||++..... .....++..++..+++......+      ........+ .+++|.|+|+
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~-~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g-~~~~~~v~dv   84 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERP-DEEFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSG-VNFQWDVIDI   84 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEG-GGTEEEEEETTEEEEEEEC-----------CCSSTTTT-EEEEEECSCH
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecC-CCCEEEEEcCCeEEEEEeccCCCcccccCccccCCCCc-eEEEEEECCH
Confidence            458999999999999999999999875321 12234455566667776542111      001111223 4599999999


Q ss_pred             HHHHHHHHh-CCCeEeeceeec------CCeeEEEEEEECCCCCEEEEEeecC
Q 042945           81 KLVMRKLEE-MNIEYETAVVDE------GGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        81 ~~~~~~l~~-~G~~i~~~~~~~------~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      ++++++|++ +|+++..++...      .+++.+.++++|||||.|||++...
T Consensus        85 d~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           85 EPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             HHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC--
T ss_pred             HHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCC
Confidence            999999999 999988776531      2345688999999999999998543

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.78  E-value=2.5e-18  Score=118.25  Aligned_cols=115  Identities=12%  Similarity=0.141  Sum_probs=78.4

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcce----------
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNH----------   72 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~----------   72 (172)
                      +.++.|+.|.|+|++++++||+++||+++...........++   +..+++.... ......  .....|          
T Consensus        19 ~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~---g~~l~l~~~~-~~~~~~--~~~~~~~~~g~~~~~~   92 (148)
T 3bt3_A           19 VVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDY---GCVFDYPSEV-AVAHLT--PFRGFHLFKGEPIKGV   92 (148)
T ss_dssp             EEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTSCEEE---EEEESSCTTT-TSCC----CCCSEEEEESCCCSSE
T ss_pred             eEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCCccEE---ccEEEEeccC-CCcccc--cccccceeeccCCCcc
Confidence            467999999999999999999999999985311001122333   3333331111 110000  001122          


Q ss_pred             EEE-EeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           73 ISF-QCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        73 v~~-~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      .+| .|+|+++++++|+++|+++..++.... +|.+.+|++|||||.|||++.
T Consensus        93 ~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~  144 (148)
T 3bt3_A           93 AGFMMIEGIDALHKYVKENGWDQISDIYTQP-WGARECSITTTDGCILRFFES  144 (148)
T ss_dssp             EEEEEEECHHHHHHHHHHTTCCCBCCCEEET-TTEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHcCCccccCcccCC-CccEEEEEECCCCCEEEEeee
Confidence            255 999999999999999999887775544 566889999999999999985

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.76  E-value=2.6e-17  Score=127.66  Aligned_cols=119  Identities=13%  Similarity=0.255  Sum_probs=85.7

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEe-CCe--eEEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFN-HGI--GIHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~--~l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      |++.+|+||.|.|+|++++++||+++|||++.....  ....|... .+.  .++.+... .+. .....++..|++|.|
T Consensus       176 ~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~-~~~-~~~~~~~~~hiaf~v  251 (338)
T 1zsw_A          176 HQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND--QEAIFQSIKGEAFGEIVVKYLD-GPT-EKPGRGSIHHLAIRV  251 (338)
T ss_dssp             GSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS--SEEEEESSTTCSTTCEEEEECC-SSB-CBCCBTCEEEEEEEE
T ss_pred             ccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC--CeEEEEecCCCCceEEEEeccC-CCC-CCCCCCceEEEEEEe
Confidence            357899999999999999999999999999987642  12223221 122  34444331 111 111124568999999


Q ss_pred             C---CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           78 S---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        78 ~---dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +   |+++++++|+++|+++. ++....  +.+.+||+|||||.|||++..+
T Consensus       252 ~~~~dv~~~~~~l~~~G~~~~-~~~~~~--~~~~~~~~DPdG~~iEl~~~~~  300 (338)
T 1zsw_A          252 KNDAELAYWEEQVKQRGFHSS-GIIDRF--YFKSLYFRESNGILFEIATDGP  300 (338)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCC-CCEECS--SEEEEEEECTTCCEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHCCCcee-eeeecC--ceEEEEEECCCCCEEEEEEcCC
Confidence            8   79999999999999985 454443  4588999999999999998764

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.76  E-value=6.2e-17  Score=125.65  Aligned_cols=120  Identities=12%  Similarity=0.097  Sum_probs=87.3

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC-CeeEEEeecCCCCcccCCCCCCcceEEEEeCC-
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH-GIGIHLLESDKAPEKRGKINPKDNHISFQCSD-   79 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d-   79 (172)
                      .+++|+||+|.|+|++++.+||+++|||+...+..  ....+...+ +..++++.....+.. ....++.+|+||.|+| 
T Consensus       150 ~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~--~~~~~~~g~~~~~l~l~~~~~~~~~-~~g~g~~~HiAf~v~d~  226 (335)
T 3oaj_A          150 AIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG--DFVRYRSAGDIGNVIDLKLTPIGRG-QMGAGTVHHIAWRANDD  226 (335)
T ss_dssp             SCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET--TEEEEECSSSSSCEEEEESSCCCBC-BCSBTEEEEEEEEESSH
T ss_pred             hhccccceEEEECCHHHHHHHHHHHhCCEEeeccC--CEEEEEeCCCCcEEEEEeCCCCCcC-CCCCcceEEEEEEcCCH
Confidence            57899999999999999999999999999987631  122222211 345677664332211 1223457899999997 


Q ss_pred             --HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           80 --MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        80 --l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                        ++++.++|.++|+++... .....  .+++|++||+|++|||++..+.
T Consensus       227 ~~l~~~~~~L~~~G~~~~~~-~~r~~--~~siYfrDP~G~~iEl~td~pg  273 (335)
T 3oaj_A          227 EDQLDWQRYIASHGYGVTPV-RDRNY--FNAIYFREHGEILFEIATDPPG  273 (335)
T ss_dssp             HHHHHHHHHHHHTTCCCCCC-EECSS--SEEEEEECTTSCEEEEEESCSC
T ss_pred             HHHHHHHHHHHHCCCCcccc-ccCCc--EEEEEEECCCCcEEEEEeCCCC
Confidence              667899999999986543 33333  3789999999999999998664

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.75  E-value=3.1e-17  Score=125.01  Aligned_cols=140  Identities=11%  Similarity=0.070  Sum_probs=93.8

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeec--CC--------C--cceEEEEeCC--eeEEEeecCCCCcccCCCCC
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP--SF--------N--FEGAWLFNHG--IGIHLLESDKAPEKRGKINP   68 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~~--------~--~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~   68 (172)
                      +.+|+|+.|.|+|++++++||+++||+++....  ..        +  ....|+..++  ..+.+....        ...
T Consensus       140 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~  211 (300)
T 2zyq_A          140 EQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMP--------TSS  211 (300)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESSC--------CSS
T ss_pred             CCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecCC--------CCC
Confidence            468999999999999999999999999986532  10        1  1223333322  223343211        134


Q ss_pred             CcceEEEEeCCHHH---HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCCCCCCCCCCCCCcccccc
Q 042945           69 KDNHISFQCSDMKL---VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVLPLSSCPLKLPSKRSS  145 (172)
Q Consensus        69 g~~~v~~~v~dl~~---~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~~~~~~~~~~~~~~~~~~  145 (172)
                      +..|++|.|+|+++   ++++|+++|+++..+|......+.+++|++|||||+|||++......  ..........+...
T Consensus       212 g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~~~~--~~~w~~~~~~~~~~  289 (300)
T 2zyq_A          212 GIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEGRQVD--DRDWIARESTAVSL  289 (300)
T ss_dssp             SEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECCCBCC--TTTCCCEECCCSEE
T ss_pred             CceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCCeEec--CCcccccccCCccc
Confidence            56899999998665   59999999999987775543223578999999999999998654322  11122222245677


Q ss_pred             cccccch
Q 042945          146 EKAACSG  152 (172)
Q Consensus       146 ~~~~~~~  152 (172)
                      ||.+.+.
T Consensus       290 wg~~~~~  296 (300)
T 2zyq_A          290 WGHDFTV  296 (300)
T ss_dssp             EECCTTC
T ss_pred             ccCCCCC
Confidence            7776653

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.75  E-value=2e-17  Score=126.43  Aligned_cols=145  Identities=12%  Similarity=0.155  Sum_probs=94.5

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC-c-ce-EEEEeCC--eeEEEeecCCCCcccCCCCCC-cceEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN-F-EG-AWLFNHG--IGIHLLESDKAPEKRGKINPK-DNHIS   74 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~-~~-~~~~~~~--~~l~l~~~~~~~~~~~~~~~g-~~~v~   74 (172)
                      |.+.+|+||.|.|+|++++++||+++||+++......+ . .. .|+....  ..+.+....         ..+ ..|++
T Consensus       146 ~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---------~~g~~~hi~  216 (307)
T 1mpy_A          146 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP---------EKGRLHHVS  216 (307)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS---------SSSEEEEEE
T ss_pred             CCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEecCC---------CCCcceEEE
Confidence            45788999999999999999999999999987653111 1 11 2322221  223333211         124 68999


Q ss_pred             EEeC---CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCCCCCC---CCCCCCCccccccccc
Q 042945           75 FQCS---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVLPL---SSCPLKLPSKRSSEKA  148 (172)
Q Consensus        75 ~~v~---dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~~~~~---~~~~~~~~~~~~~~~~  148 (172)
                      |.|+   ++++++++|+++|+++..+|.+......+.+|++|||||+|||++.........   .....+....+..|++
T Consensus       217 f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  296 (307)
T 1mpy_A          217 FHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDR  296 (307)
T ss_dssp             EECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHHCTTTC
T ss_pred             EEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecccccCCCCCCeEeecccccccceecCc
Confidence            9999   567788999999999887776533112368999999999999998654321111   1122233345555666


Q ss_pred             ccchHH
Q 042945          149 ACSGEV  154 (172)
Q Consensus       149 ~~~~~~  154 (172)
                      ..+...
T Consensus       297 ~~~~~~  302 (307)
T 1mpy_A          297 ILNERF  302 (307)
T ss_dssp             SCCGGG
T ss_pred             ccchhh
Confidence            665543

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.75  E-value=2.9e-17  Score=125.51  Aligned_cols=136  Identities=13%  Similarity=0.138  Sum_probs=92.4

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC------CcceEEEEeCCe--eEEEeecCCCCcccCCCCCCcceEE
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF------NFEGAWLFNHGI--GIHLLESDKAPEKRGKINPKDNHIS   74 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~--~l~l~~~~~~~~~~~~~~~g~~~v~   74 (172)
                      +.+|+||.|.|+|+++|++|| ++||+++......      .....|+...+.  .+.+...        ...++..|++
T Consensus       144 ~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~hia  214 (305)
T 2wl9_A          144 GQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVG--------PMDKRINHLM  214 (305)
T ss_dssp             TTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECCS--------CCSSSEEEEE
T ss_pred             CceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEecC--------CCCCCceEEE
Confidence            468999999999999999999 9999998643211      112334433221  1222211        1124678999


Q ss_pred             EEeCC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCCCCCCCCCCCCCcccccccccccc
Q 042945           75 FQCSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVLPLSSCPLKLPSKRSSEKAACS  151 (172)
Q Consensus        75 ~~v~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (172)
                      |.|+|   +++++++|+++|+++..++......+.+++|++|||||+|||++.........      ...+...||++.+
T Consensus       215 f~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~d~~~------~~~~~~~wg~~~~  288 (305)
T 2wl9_A          215 IEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGSRPAPAQQ------EHYLRDIFGHDNE  288 (305)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCCCCCSSC------CCBSSCSEECCBC
T ss_pred             EEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCCEEeCCcc------CCcccccccCccc
Confidence            99998   66788899999999987775543223467999999999999998754322221      2455677777765


Q ss_pred             hH
Q 042945          152 GE  153 (172)
Q Consensus       152 ~~  153 (172)
                      .+
T Consensus       289 ~~  290 (305)
T 2wl9_A          289 VE  290 (305)
T ss_dssp             SC
T ss_pred             cc
Confidence            43

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.75  E-value=2.5e-17  Score=126.40  Aligned_cols=138  Identities=15%  Similarity=0.157  Sum_probs=96.1

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCe--eEEEeecCCCCcccCCCCCCcceEEEEeCC
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGI--GIHLLESDKAPEKRGKINPKDNHISFQCSD   79 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d   79 (172)
                      .+.+|+|+.|.|+|++++.+||+++|||++....  +....|+...+.  .+.+...        .  .+..|++|.|+|
T Consensus       138 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~~~~~fl~~~~~~~~l~l~~~--------~--~g~~hi~f~v~d  205 (310)
T 3b59_A          138 VPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWL--GDFMCFLRCNSAHHRIAILPG--------P--PCLNHVAYDMLS  205 (310)
T ss_dssp             CCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEE--TTTEEEEESSSBSCSEEEEES--------S--SEEEEEEEECSS
T ss_pred             cCcEeceEEEecCCHHHHHHHHHhCCCCEEEEee--CCeEEEEecCCCcceEEEECC--------C--CceEEEEEEcCC
Confidence            3578999999999999999999999999988653  223445543322  2333321        1  467899999999


Q ss_pred             HHHH---HHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCCCCC-CCCCC-CCCcccccccccccc
Q 042945           80 MKLV---MRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVLP-LSSCP-LKLPSKRSSEKAACS  151 (172)
Q Consensus        80 l~~~---~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~  151 (172)
                      ++++   +++|+++|+++...+.+....+.+++|++||+||.||+++........ +.... ...+.....||+..+
T Consensus       206 ~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~d~~~~~~~~~~~~~~~~~~Wg~~~~  282 (310)
T 3b59_A          206 VDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELEEVDFDTHQYKVHVPAPMVMDQWGIGTG  282 (310)
T ss_dssp             HHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCCBCCTTTCCCCEECCCHHHHCSSCCSSB
T ss_pred             HHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCccEecCCCCCceEecCCCccccccCCCCC
Confidence            8777   999999999988777654322347899999999999999876543221 11111 111356677776654

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.74  E-value=2.5e-17  Score=111.96  Aligned_cols=114  Identities=16%  Similarity=0.210  Sum_probs=79.0

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecC--CCcceEEEEeCC--eeEEEeecCCCCcccCCCCCCcceEEEEeCCH
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS--FNFEGAWLFNHG--IGIHLLESDKAPEKRGKINPKDNHISFQCSDM   80 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl   80 (172)
                      .+.||.|.|+|+++|++||+++||+++..+..  ......++...+  ..+++.......  +.....+..|++|.|+|+
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~~~~hi~~~v~d~   88 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGS--TAPVPHPDSLLVFYVPNA   88 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEETTCC--CCCCCCTTCEEEEECCCH
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccCCCCeeEEEEecCCCceEEEEeecCCCC--CCCCCCCccEEEEEeCCc
Confidence            35678889999999999999999999876531  112233443332  235555433221  122234568999999999


Q ss_pred             ---HHHHHHHHhCCCeEee--ceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           81 ---KLVMRKLEEMNIEYET--AVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        81 ---~~~~~~l~~~G~~i~~--~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                         ++++++|+++|+++..  .+.. ..++   .|++|||||.|||++.
T Consensus        89 ~~l~~~~~~l~~~G~~~~~~~~~~~-~~~g---~~~~DPdG~~iel~~~  133 (139)
T 1twu_A           89 VELAAITSKLKHMGYQEVESENPYW-SNGG---VTIEDPDGWRIVFMNS  133 (139)
T ss_dssp             HHHHHHHHHHHHTTCCEECCSSHHH-HSSE---EEEECTTCCEEEEESS
T ss_pred             chHHHHHHHHHHcCCcCcCCCCccc-CCCC---eEEECCCCCEEEEEEc
Confidence               9999999999999873  2221 1233   2699999999999974

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.74  E-value=3.5e-17  Score=124.52  Aligned_cols=140  Identities=13%  Similarity=0.136  Sum_probs=94.4

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC------CcceEEEEeCC--eeEEEeecCCCCcccCCCCCCcceEE
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF------NFEGAWLFNHG--IGIHLLESDKAPEKRGKINPKDNHIS   74 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~g~~~v~   74 (172)
                      +.+|+|+.|.|+|++++++||+++||+++......      .....|+...+  ..+.+...   +     ...+..|++
T Consensus       140 ~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~---~-----~~~~~~hia  211 (297)
T 1lgt_A          140 EQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAF---P-----LPKRIHHFM  211 (297)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC---C-----CSSSEEEEE
T ss_pred             ccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcC---C-----CCCCceEEE
Confidence            46899999999999999999999999998754111      01223433222  22444321   1     134668999


Q ss_pred             EEeCCHHHHH---HHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCCCCCCCCCCCCCcccccccccccc
Q 042945           75 FQCSDMKLVM---RKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVLPLSSCPLKLPSKRSSEKAACS  151 (172)
Q Consensus        75 ~~v~dl~~~~---~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (172)
                      |.|+|++++.   ++ +++|+++..+|.+......+++|++|||||.|||++......   .........+...||...|
T Consensus       212 f~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~~d---~~w~~~~~~~~~~wg~~~~  287 (297)
T 1lgt_A          212 LEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSARTVD---RSWVVVRHDSPSMWGHKSV  287 (297)
T ss_dssp             EEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECCCBCC---TTCCCEEESCSEEEECCBC
T ss_pred             EeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCCEEec---cccccCCcccccccCCCCc
Confidence            9999988776   88 999999988776543212467999999999999998754332   1112222355788888887


Q ss_pred             hHH
Q 042945          152 GEV  154 (172)
Q Consensus       152 ~~~  154 (172)
                      +.+
T Consensus       288 ~~~  290 (297)
T 1lgt_A          288 RDK  290 (297)
T ss_dssp             ---
T ss_pred             cch
Confidence            654

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.73  E-value=1.1e-16  Score=123.50  Aligned_cols=144  Identities=19%  Similarity=0.247  Sum_probs=95.0

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC-c--ceEEEEeCC--eeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN-F--EGAWLFNHG--IGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~--~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      .+.+|+|+.|.|+|++++.+|| ++|||++....... .  ...|+...+  ..+.+...         ..++.+|++|.
T Consensus       149 ~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~---------~~~~~~Hiaf~  218 (323)
T 1f1u_A          149 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGG---------NGPRMHHVAFA  218 (323)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEES---------SBSEEEEEEEE
T ss_pred             CCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeCC---------CCCCceEEEEE
Confidence            4678999999999999999999 99999987653111 1  123333222  12333221         12367899999


Q ss_pred             eCCHHH---HHHHHHhCCC--eEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCC-CC--CCCCCCCCCcccccccc-
Q 042945           77 CSDMKL---VMRKLEEMNI--EYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLP-VL--PLSSCPLKLPSKRSSEK-  147 (172)
Q Consensus        77 v~dl~~---~~~~l~~~G~--~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~-~~--~~~~~~~~~~~~~~~~~-  147 (172)
                      |+|+++   ++++|+++|+  ++...+......+.+++|++||+||.||+++..... ..  ++.............|| 
T Consensus       219 v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~~~~~~~~~~w~~~~~~~~~~wg~  298 (323)
T 1f1u_A          219 THEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDYYTGDPDNPTITWDVHDNQRRDWWGN  298 (323)
T ss_dssp             CSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCCCCSTTCCCEEEETTCGGGTCTTCC
T ss_pred             CCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCCEEeeCCCCCCeEEEcCCcccccccCC
Confidence            999998   9999999999  888666554433457799999999999999754332 11  11222222334555665 


Q ss_pred             cccchHHH
Q 042945          148 AACSGEVV  155 (172)
Q Consensus       148 ~~~~~~~~  155 (172)
                      +..+..++
T Consensus       299 ~~~~~~f~  306 (323)
T 1f1u_A          299 PVVPSWYT  306 (323)
T ss_dssp             CCCGGGGT
T ss_pred             CCCChhhh
Confidence            44444443

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.73  E-value=2.8e-16  Score=117.43  Aligned_cols=115  Identities=16%  Similarity=0.193  Sum_probs=86.8

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC--C
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS--D   79 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~--d   79 (172)
                      ++++|+||.|.|+|++++.+||+++||+++..+..   ...++..++..+.+......       ..+..|++|.|+  +
T Consensus        23 ~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~---~~~~L~~g~~~l~l~~~~~~-------~~~~~hiaf~V~~~d   92 (252)
T 3pkv_A           23 HMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA---DAFTIQLGVSQIQFRAAADG-------TKPFYHIAINIAANH   92 (252)
T ss_dssp             --CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS---SEEEEEETTEEEEEEECCTT-------CCCCCEEEEEECTTC
T ss_pred             cCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC---CEEEEEeCCEEEEEEECCCC-------CCCeeEEEEEecHHH
Confidence            45789999999999999999999999999887632   34555556666666654311       235789999885  7


Q ss_pred             HHHHHHHHHhCCCeEeec-eee---cCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           80 MKLVMRKLEEMNIEYETA-VVD---EGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~-~~~---~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      +++++++|.++ +++..+ +..   ...++.+.+||+|||||.+||++....
T Consensus        93 ld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~  143 (252)
T 3pkv_A           93 FQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQA  143 (252)
T ss_dssp             HHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESSS
T ss_pred             HHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCCC
Confidence            99999999999 988652 211   123466899999999999999997554

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.73  E-value=4.3e-17  Score=123.75  Aligned_cols=138  Identities=17%  Similarity=0.166  Sum_probs=91.9

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC------cceEEEEeCC--eeEEEeecCCCCcccCCCCCCcceE
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN------FEGAWLFNHG--IGIHLLESDKAPEKRGKINPKDNHI   73 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~------~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~g~~~v   73 (172)
                      .+++|+|+.|.|+|++++++||+++||+++.......      ....|+...+  ..+.+...+        ..++..|+
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~hi  210 (292)
T 1kw3_B          139 GDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFP--------IPKRIHHF  210 (292)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCS--------CSSSEEEE
T ss_pred             CCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecCC--------CCCceEEE
Confidence            3578999999999999999999999999987542110      1123333222  223333211        12466899


Q ss_pred             EEEeCCHHH---HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCC-EEEEEeecCCCCCCCCCCCCCCcccccccccc
Q 042945           74 SFQCSDMKL---VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGY-MIEICNCQNLPVLPLSSCPLKLPSKRSSEKAA  149 (172)
Q Consensus        74 ~~~v~dl~~---~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~-~iei~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (172)
                      +|.|+|+++   .+++|+ +|+++..+|......+.+++|++||||| .|||++......   .........+...||..
T Consensus       211 af~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~~~~d---~~w~~~~~~~~~~wg~~  286 (292)
T 1kw3_B          211 MLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGPRTVD---SSWTVARHSRTAMWGHK  286 (292)
T ss_dssp             EEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECCCBCC---TTCCCCEESCSEEEECC
T ss_pred             EEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECCEEcc---CCccccCCCccceeCCC
Confidence            999998665   677999 9999887765443212467899999999 999998654332   11122222456778877


Q ss_pred             cc
Q 042945          150 CS  151 (172)
Q Consensus       150 ~~  151 (172)
                      .+
T Consensus       287 ~~  288 (292)
T 1kw3_B          287 SV  288 (292)
T ss_dssp             BC
T ss_pred             CC
Confidence            66

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.73  E-value=3e-16  Score=119.02  Aligned_cols=121  Identities=14%  Similarity=0.116  Sum_probs=87.1

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCc--ceEEEEeCCeeE-EEeecCCCCcccCCCCCCcceEEEEeCCH
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNF--EGAWLFNHGIGI-HLLESDKAPEKRGKINPKDNHISFQCSDM   80 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~--~~~~~~~~~~~l-~l~~~~~~~~~~~~~~~g~~~v~~~v~dl   80 (172)
                      ..+.|+.|.|+|++++++||+++||+++........  ...++...+... .+.......   ....+...+++|.|+|+
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~---~~~~~~~~~~~~~v~d~  107 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLNGEAVAAIAPMPPGA---PEGMPPIWNTYIAVDDV  107 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEEEEETTEEEEEEEECCSCC------CCCEEEEEEECSCH
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEEEEeCCeeeEeeccCCCCC---CCCCCCcEEEEEEeCCH
Confidence            369999999999999999999999999877642211  122333333332 233322111   11234557899999999


Q ss_pred             HHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCC
Q 042945           81 KLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLP  128 (172)
Q Consensus        81 ~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~  128 (172)
                      ++++++|+++|+++..++....+++ +.++++||+||.|||++.....
T Consensus       108 d~~~~~l~~~G~~~~~~p~~~~~~g-~~~~~~DP~G~~i~l~~~~~~~  154 (282)
T 3oxh_A          108 DAVVDKVVPGGGQVMMPAFDIGDAG-RMSFITDPTGAAVGLWQANRHI  154 (282)
T ss_dssp             HHHHTTTTTTTCEEEEEEEEETTTE-EEEEEECTTCCEEEEEEESSCC
T ss_pred             HHHHHHHHHCCCEEEECCEecCCCe-EEEEEECCCCCEEEEEEccccC
Confidence            9999999999999988887655444 7899999999999999987653

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.72  E-value=8.1e-17  Score=123.27  Aligned_cols=116  Identities=18%  Similarity=0.240  Sum_probs=86.8

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEe-CC---eeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFN-HG---IGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~---~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      |++++|+||.|.|+|++++++||+++||+++..+..  ....++.. ++   ..+.+....         .++..|++|.
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~~~l~~~~~~~~~~l~l~~~~---------~~~~~h~a~~   72 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QGRVYFKCWDERDHSCYIIREAD---------TAGIDFFGFK   72 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TSCEEEECTTCCBSCSEEEEECS---------SCEEEEEEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CCeEEEEeccCCCceEEEEEeCC---------CCceeEEEEE
Confidence            357899999999999999999999999999987642  12344432 22   233333221         2366899999


Q ss_pred             eCC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           77 CSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        77 v~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      |++   +++++++|+++|+++...+......+.+.+||+|||||.|||++....
T Consensus        73 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~  126 (309)
T 3hpy_A           73 VLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKTC  126 (309)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCB
T ss_pred             ECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccce
Confidence            986   999999999999998775542112345789999999999999987654

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.72  E-value=4.5e-16  Score=118.04  Aligned_cols=117  Identities=14%  Similarity=0.086  Sum_probs=83.9

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeec-CCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHH
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP-SFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKL   82 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~   82 (172)
                      ..+.|+.|.|+|++++++||+++||+++.... ........+...+..+..+....     ....++..+++|.|+|+++
T Consensus       163 ~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~dvd~  237 (282)
T 3oxh_A          163 GTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEVGGCMEPP-----MPGVPNHWHVYFAVDDADA  237 (282)
T ss_dssp             TSEEEEEEECSCHHHHHHHHHHHHCCEEEEC-------CEEEEETTEEEEEEECCS-----STTCCSEEEEEEECSCHHH
T ss_pred             CccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcceEEEEcCCccEeeecCCC-----CCCCCCeEEEEEEeCCHHH
Confidence            46899999999999999999999999987643 11112222333333322221111     1123355799999999999


Q ss_pred             HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           83 VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        83 ~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      ++++++++|+++..+|.+.. ++.+.+|++||+||.|+|++..+
T Consensus       238 ~~~~~~~~G~~~~~~p~~~~-~~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          238 TAAKAAAAGGQVIAEPADIP-SVGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             HHHHHHHTTCEEEEEEEEET-TTEEEEEEECTTSCEEEEEEEC-
T ss_pred             HHHHHHHcCCEEecCCeEcC-CCeEEEEEECCCCCEEEEEecCC
Confidence            99999999999998887654 34588999999999999998654

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.72  E-value=1.1e-16  Score=124.05  Aligned_cols=122  Identities=16%  Similarity=0.235  Sum_probs=87.5

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC-CCcce-E--EEEeC----CeeEEEeecCCCCcccCCCCCCcceE
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEG-A--WLFNH----GIGIHLLESDKAPEKRGKINPKDNHI   73 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-~~~~~-~--~~~~~----~~~l~l~~~~~~~~~~~~~~~g~~~v   73 (172)
                      ++++|+||.|.|+|+++|++||+++||+++..+.. .+... .  +....    +..+.+........ ......+..|+
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~-~~~~~~~~~hi  105 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR-TYRGTNAITRI  105 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCB-CBCCBSEEEEE
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCcc-CcCCCCCeeeE
Confidence            47899999999999999999999999999876531 11111 1  11111    34555555432211 11123456799


Q ss_pred             EEEeC---CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           74 SFQCS---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        74 ~~~v~---dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      +|.|+   |+++++++|+++|+++..++. ..  |.+.+||+|||||.|||++....
T Consensus       106 af~v~~~~dld~~~~~l~~~G~~~~~~~~-~~--G~~~~~f~DPdG~~iel~~~~~~  159 (338)
T 1zsw_A          106 GLLVPSEDSLHYWKERFEKFDVKHSEMTT-YA--NRPALQFEDAEGLRLVLLVSNGE  159 (338)
T ss_dssp             EEEESCHHHHHHHHHHHHHTTCEECCSEE-ET--TEEEEEEECTTCCEEEEEECTTC
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCccccccc-cC--CcEEEEEECCCCCEEEEEEcCCc
Confidence            99998   799999999999999887654 22  44889999999999999997653

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.71  E-value=9.7e-17  Score=122.63  Aligned_cols=113  Identities=14%  Similarity=0.207  Sum_probs=86.2

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC--eeEEEeecCCCCcccCCCCCCcceEEEEeC
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG--IGIHLLESDKAPEKRGKINPKDNHISFQCS   78 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~   78 (172)
                      |++++|+||.|.|+|++++++||+++||+++....  .....++..++  ..+.+....         ..+..|++|.|+
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~~~~~~~~~~~~~~l~l~~~~---------~~~~~~~~f~v~   70 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDG--EDDRIYLRMDRWHHRIVLHADG---------SDDLAYIGWRVA   70 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCS--CTTEEEEECSSBSCSEEEECSS---------CCEEEEEEEECS
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeecc--CCCeEEEEeCCCeEEEEEEECC---------CCCeEEEEEEEC
Confidence            57899999999999999999999999999988621  12334444443  345554221         235689999997


Q ss_pred             ---CHHHHHHHHHhCCCeEeeceeec--CCeeEEEEEEECCCCCEEEEEee
Q 042945           79 ---DMKLVMRKLEEMNIEYETAVVDE--GGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        79 ---dl~~~~~~l~~~G~~i~~~~~~~--~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                         |+++++++|+++|+++..++...  ...+.+.+|++|||||.|||++.
T Consensus        71 ~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           71 GPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             SHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence               79999999999999988665432  11245789999999999999987

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.70  E-value=3.9e-16  Score=122.41  Aligned_cols=116  Identities=19%  Similarity=0.129  Sum_probs=86.0

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCe----eEEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGI----GIHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      .|++|+||.|.|+|++++++||+++||+++..+.   ....++...+.    .+.+...         ..++..|++|.|
T Consensus        14 ~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~---~~~~~lr~~~~~~~~~l~l~~~---------~~~gl~~~a~~v   81 (365)
T 4ghg_A           14 DILRCAYAELVVTDLAKSRNFYVDVLGLHVSYED---ENQIYLRSFEEFIHHNLVLTKG---------PVAALKAMAFRV   81 (365)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC---SSEEEEECTTCCSSCSEEEEEC---------SSCEEEEEEEEE
T ss_pred             CCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEc---CCEEEEEeCCCCcceEEEeccC---------CCCCcceEEEEe
Confidence            3689999999999999999999999999998773   23444433221    2323221         134678999999


Q ss_pred             C---CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCCC
Q 042945           78 S---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPV  129 (172)
Q Consensus        78 ~---dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~~  129 (172)
                      .   +++++.++|+++|+++...+......+.+.++|+|||||.|||+...+...
T Consensus        82 ~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~  136 (365)
T 4ghg_A           82 RTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVE  136 (365)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCC
T ss_pred             CCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccc
Confidence            6   588999999999999876543322223478999999999999998766543

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.69  E-value=4.9e-16  Score=120.31  Aligned_cols=140  Identities=15%  Similarity=0.145  Sum_probs=92.3

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCe--eEEEeecCCCCcccCCCCCCcceEEEEeC--C
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGI--GIHLLESDKAPEKRGKINPKDNHISFQCS--D   79 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--~l~l~~~~~~~~~~~~~~~g~~~v~~~v~--d   79 (172)
                      ..+.||.|.|+|++++++||+++||+++....... ...++..++.  .+.+.....    ......+..|++|.|+  |
T Consensus       158 ~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~-~~~~l~~g~~~~~l~l~~~~~----~~~~~~~~~hiaf~v~~~d  232 (330)
T 3zi1_A          158 DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK-QRALLGYADNQCKLELQGVKG----GVDHAAAFGRIAFSCPQKE  232 (330)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT-TEEEEESSTTSCEEEEEECSS----CCCCBTTCCEEEEEECGGG
T ss_pred             CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC-cEEEEEeCCceEEEEECCCCC----CCCCCCCCceEEEEEEccc
Confidence            35789999999999999999999999998764322 2345544432  344433221    1122345679999995  8


Q ss_pred             HHHHHHHHHhCCCeEeeceeec--C-CeeEEEEEEECCCCCEEEEEeecCCCCC--CCCCCCCCCccccccccc
Q 042945           80 MKLVMRKLEEMNIEYETAVVDE--G-GIQVDQLFFHDPDGYMIEICNCQNLPVL--PLSSCPLKLPSKRSSEKA  148 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~--~-~~g~~~~~~~DPdG~~iei~~~~~~~~~--~~~~~~~~~~~~~~~~~~  148 (172)
                      +++++++|+++|+++..++...  . .++.+.+||+|||||.|||++.......  ........+..++.++|+
T Consensus       233 ld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  306 (330)
T 3zi1_A          233 LPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFRELSKMDPEGSNCWIDSKGGYGS  306 (330)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHHHHHTCCCTTGGGGSTTC------
T ss_pred             HHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEecccccccCCCCCCCccHHHHhhccCh
Confidence            9999999999999988776542  1 2345889999999999999987543111  111344445566666665

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.68  E-value=5.4e-16  Score=118.99  Aligned_cols=115  Identities=17%  Similarity=0.266  Sum_probs=88.8

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC----eeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG----IGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      |++++|.|+.|.|+|++++++||+++||+++..+.   ....++...+    ..+.+....         ..+..|++|.
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~---~~~~~l~~~~~~~~~~l~l~~~~---------~~~~~~~~~~   71 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGED---ANNAWFKAQGADEHHVVQLRRAD---------ENRIDVIALA   71 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEC---SSEEEEECTTSCCSCSEEEEECS---------SCEEEEEEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeec---CCeEEEEECCCCCCEEEEEEECC---------CCCeeEEEEE
Confidence            46789999999999999999999999999988753   2334444444    445554321         2356799999


Q ss_pred             e---CCHHHHHHHHHhCCCeEeeceee-cCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           77 C---SDMKLVMRKLEEMNIEYETAVVD-EGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        77 v---~dl~~~~~~l~~~G~~i~~~~~~-~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      |   +|+++++++|.++|+++..++.. ..+++.+.++++||+||.|||++..+.
T Consensus        72 v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  126 (310)
T 3b59_A           72 ADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVAK  126 (310)
T ss_dssp             ESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECCCC
T ss_pred             eCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEcccc
Confidence            8   69999999999999998877654 122345789999999999999987654

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.68  E-value=2.3e-16  Score=120.13  Aligned_cols=112  Identities=19%  Similarity=0.269  Sum_probs=82.8

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEee-ecCCCcceEEEEeCCe--eEEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIK-RPSFNFEGAWLFNHGI--GIHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~-~~~~~~~~~~~~~~~~--~l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      |++++|+|+.|.|+|++++++||+++||+++.. +.   ....++...+.  .+.+...         ..++..|++|.|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~~~~~~~~~~~~~l~l~~~---------~~~~~~~~~~~v   68 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EGALYLRMDDFPARLVVVPG---------EHDRLLEAGWEC   68 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SSCEEEESSSSSCSEEEEEC---------SSCEEEEEEEEC
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CCeEEEEeCCCcEEEEEecC---------CCCCcceEEEEe
Confidence            789999999999999999999999999999876 42   12344433332  2333321         123567999999


Q ss_pred             C---CHHHHHHHHHhCCCeEeeceeec--CCeeEEEEEEECCCCCEEEEEee
Q 042945           78 S---DMKLVMRKLEEMNIEYETAVVDE--GGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        78 ~---dl~~~~~~l~~~G~~i~~~~~~~--~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +   |+++++++|+++|+++...+...  ..++.+.+||+|||||.|||++.
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           69 ANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            6   48999999999999987655431  11124789999999999999987

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.68  E-value=1.6e-16  Score=121.26  Aligned_cols=115  Identities=13%  Similarity=0.148  Sum_probs=85.0

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC--eeEEEeecCCCCcccCCCCCCcceEEEEeC
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG--IGIHLLESDKAPEKRGKINPKDNHISFQCS   78 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~   78 (172)
                      |++++|+||.|.|+|++++++||+++||+++..+..  ....|+...+  ..+.+....         .++..|++|.|+
T Consensus         5 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~l~l~~~~---------~~~~~~~~~~v~   73 (302)
T 2ehz_A            5 AAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KDRFYLRMDYWHHRIVVHHNG---------QDDLEYLGWRVA   73 (302)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--SSEEEEESSSBSCSEEEESSC---------CSEEEEEEEEES
T ss_pred             ccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--CcceEEEeCCCceEEEEecCC---------CCCeeEEEEEEC
Confidence            678999999999999999999999999999986531  2334443322  224333211         235679999994


Q ss_pred             ---CHHHHHHHHHhCCCeEeeceeecC--CeeEEEEEEECCCCCEEEEEeecC
Q 042945           79 ---DMKLVMRKLEEMNIEYETAVVDEG--GIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        79 ---dl~~~~~~l~~~G~~i~~~~~~~~--~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                         |+++++++|+++|+++...+....  .++.+.+|++|||||.|||++..+
T Consensus        74 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  126 (302)
T 2ehz_A           74 GKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPR  126 (302)
T ss_dssp             SHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEEC
T ss_pred             CHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCC
Confidence               799999999999999876553221  123578999999999999998754

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.67  E-value=7e-16  Score=117.76  Aligned_cols=114  Identities=16%  Similarity=0.180  Sum_probs=79.4

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC----C--cceEEEEeCCe--eEEEeecCCCCcccCCCCCCcceEEE
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF----N--FEGAWLFNHGI--GIHLLESDKAPEKRGKINPKDNHISF   75 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~----~--~~~~~~~~~~~--~l~l~~~~~~~~~~~~~~~g~~~v~~   75 (172)
                      ++|+|+.|.|+|++++++|| ++||++.......    +  ....|+...+.  .+.+...        ...++..|++|
T Consensus       148 ~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~hiaf  218 (302)
T 2ehz_A          148 QGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGAM--------PAAKRLNHLML  218 (302)
T ss_dssp             GCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEECSC--------CCSSSEEEEEE
T ss_pred             CccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEecC--------CCCCceeEEEE
Confidence            58999999999999999999 9999997643110    1  11223322221  1222110        11245689999


Q ss_pred             EeCCHHH---HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           76 QCSDMKL---VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        76 ~v~dl~~---~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      .|+|+++   ++++|+++|+++..+|......+.+++|++|||||.|||++...
T Consensus       219 ~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (302)
T 2ehz_A          219 EYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRGA  272 (302)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCC
T ss_pred             EcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECce
Confidence            9998764   67799999999987776543223478999999999999998644

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.67  E-value=2.2e-16  Score=120.58  Aligned_cols=117  Identities=16%  Similarity=0.246  Sum_probs=85.4

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC--eeEEEeecCCCCcccCCCCCCcceEEEEe--
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG--IGIHLLESDKAPEKRGKINPKDNHISFQC--   77 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~g~~~v~~~v--   77 (172)
                      ++++|+||.|.|+|++++++||+++||++...+...  ...++...+  ..+.+.....       ..++..|++|.|  
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~--~~~~l~~~~~~~~~~l~~~~~-------~~~~~~~~~f~v~~   74 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--GRVYLKAWTEVDKFSLVLREA-------DEPGMDFMGFKVVD   74 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--SCEEEECTTCCBSCSEEEEEC-------SSCEEEEEEEEESC
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC--CcEEEEecCCCCceEEEEccC-------CCCCcceEEEEeCC
Confidence            368999999999999999999999999999876421  234443322  1222222111       123568999999  


Q ss_pred             -CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           78 -SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        78 -~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                       +|+++++++|+++|+++...+.....++.+.++++|||||.|||++..+.
T Consensus        75 ~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  125 (307)
T 1mpy_A           75 EDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEY  125 (307)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCB
T ss_pred             HHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcchh
Confidence             79999999999999998876532222234789999999999999986553

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.67  E-value=8.6e-16  Score=118.45  Aligned_cols=115  Identities=16%  Similarity=0.145  Sum_probs=86.6

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEe-C---CeeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFN-H---GIGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~---~~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      |++++|+|+.|.|+|++++++||+++||++...+.   ....++.. +   ...+.+....         ..+..|++|.
T Consensus        13 ~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~---~~~~~l~~~~~~~~~~l~l~~~~---------~~~~~~~~f~   80 (323)
T 1f1u_A           13 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEED---ENTIYLRSLEEFIHHNLVLRQGP---------IAAVAAFAYR   80 (323)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC---SSEEEEECTTCCSSCSEEEEECS---------SCEEEEEEEE
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeec---CCEEEEEecCCCCcEEEEEEECC---------CCCeeEEEEE
Confidence            45779999999999999999999999999988763   22344432 2   1234443321         2356799999


Q ss_pred             e---CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           77 C---SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        77 v---~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      |   +|+++++++|+++|+++...+.....++.+.++++||+||.|||++..+.
T Consensus        81 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~~  134 (323)
T 1f1u_A           81 VKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEH  134 (323)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCC
T ss_pred             eCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEeccc
Confidence            9   79999999999999998876642222234789999999999999987654

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.66  E-value=1.9e-15  Score=117.33  Aligned_cols=112  Identities=15%  Similarity=0.246  Sum_probs=85.2

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC----eeEEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG----IGIHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      ++++|+||.|.|+|++++++||+++||+++..+..   ...++...+    ..+.+....         ..+..|++|.|
T Consensus         8 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~~~~l~~~~~~~~~~l~l~~~~---------~~g~~~~af~v   75 (339)
T 3lm4_A            8 DIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---QSVYLRGYEDPYPWSLKITEAP---------EAGMGHAAMRT   75 (339)
T ss_dssp             SEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET---TEEEEECTTCSSSCSEEEEECS---------SCEEEEEEEEE
T ss_pred             CCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC---CEEEEEecCCCCceEEEEeeCC---------CCCcceEEEEe
Confidence            57899999999999999999999999999987632   233443311    223332211         33578999999


Q ss_pred             CC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           78 SD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        78 ~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      +|   +++++++|+++|+++...+.. .+ +.+.++|+|||||.|||+.....
T Consensus        76 ~~~~dld~~~~~l~~~G~~~~~~~~~-~~-~~~~~~f~DPdG~~iel~~~~~~  126 (339)
T 3lm4_A           76 SSPEALERRAKSLTDGNVDGTWSEDQ-FG-YGKTFEYQSPDGHNLQLLWEAEK  126 (339)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEECCS-TT-BCCEEEEECTTCCEEEEECCBCC
T ss_pred             CCHHHHHHHHHHHHHCCCceeeccCC-CC-ceEEEEEECCCCCEEEEEEeeeE
Confidence            87   999999999999998876642 22 34789999999999999987654

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.66  E-value=7.5e-16  Score=117.16  Aligned_cols=112  Identities=19%  Similarity=0.186  Sum_probs=83.7

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCe--eEEEeecCCCCcccCCCCCCcceEEEEeC--
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGI--GIHLLESDKAPEKRGKINPKDNHISFQCS--   78 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--~l~l~~~~~~~~~~~~~~~g~~~v~~~v~--   78 (172)
                      +++|+||.|.|+|++++++||+++||+++..+..   ...++...+.  .+.+...         ..++..|++|.|+  
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~~l~~~~~---------~~~~~~~~~f~v~~~   69 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD---NGDLFRIDSRAWRIAVQQG---------EVDDLAFAGYEVADA   69 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---TEEEEESSSBSCSEEEEEC---------TTCEEEEEEEEESSH
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC---CeEEEEeCCCcEEEEEecC---------CCCCccEEEEEeCCH
Confidence            6789999999999999999999999999987632   2344433332  2333221         1235679999998  


Q ss_pred             -CHHHHHHHHHhCCCeEeeceeec--CCeeEEEEEEECCCCCEEEEEeecC
Q 042945           79 -DMKLVMRKLEEMNIEYETAVVDE--GGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        79 -dl~~~~~~l~~~G~~i~~~~~~~--~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                       |+++++++|.++|+++...+...  ...+.+.+|++|||||.|||++...
T Consensus        70 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (297)
T 1lgt_A           70 AGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS  120 (297)
T ss_dssp             HHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECcc
Confidence             99999999999999987655321  1113478999999999999998654

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.65  E-value=3.5e-16  Score=118.73  Aligned_cols=114  Identities=14%  Similarity=0.134  Sum_probs=83.1

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC---C
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS---D   79 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~---d   79 (172)
                      +++|+||.|.|+|++++++||+++||+++..+..   ...++..++..+.+.....       ..++..|++|.|+   |
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~~~l~~~~~~~~l~~~~~-------~~~~~~~~~f~v~~~~d   71 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG---DAALYRADQRAWRIAVQPG-------ELDDLAYAGLEVDDAAA   71 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---TEEEEESSSBSCSEEEEEC-------TTCEEEEEEEECSSHHH
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC---CeEEEEcCCceEEEEEccC-------CCCCccEEEEEECCHHH
Confidence            6799999999999999999999999999987531   2334433332211111110       1235679999998   9


Q ss_pred             HHHHHHHHHhCCCeEeeceeec--CCeeEEEEEEECCCCCEEEEEeecC
Q 042945           80 MKLVMRKLEEMNIEYETAVVDE--GGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~--~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +++++++|+++|+++...+...  ...+.+.+||+|||||.|||++...
T Consensus        72 l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (292)
T 1kw3_B           72 LERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPA  120 (292)
T ss_dssp             HHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECcc
Confidence            9999999999999987765421  1113478999999999999998654

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.65  E-value=1.5e-15  Score=117.56  Aligned_cols=114  Identities=15%  Similarity=0.130  Sum_probs=82.0

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC------------c--ceEEEEeC----CeeEEEeecCCCCcc
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN------------F--EGAWLFNH----GIGIHLLESDKAPEK   62 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~------------~--~~~~~~~~----~~~l~l~~~~~~~~~   62 (172)
                      |.+++|.|++|.|+|++++++||+++||+++..+.+..            .  ...++..+    ...+++.......  
T Consensus        23 M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~--  100 (330)
T 3zi1_A           23 MAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG--  100 (330)
T ss_dssp             CSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC--
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC--
Confidence            67789999999999999999999999999987653211            0  12233221    2345665533221  


Q ss_pred             cCCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           63 RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        63 ~~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      ....+.+..|++|.|+|+   +++++++|+++...+   .    ..+|++|||||.|||++...
T Consensus       101 ~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~---~----~~~~~~DPdG~~iel~~~~~  154 (330)
T 3zi1_A          101 DYKLGNDFMGITLASSQA---VSNARKLEWPLTEVA---E----GVFETEAPGGYKFYLQNRSL  154 (330)
T ss_dssp             CCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE---T----TEEEEECTTSCEEEEESSCC
T ss_pred             ccccCCCeeEEEEECchH---HHHHHHcCCceeccC---C----ceEEEECCCCCEEEEEecCC
Confidence            222345778999999987   678889999987654   1    25899999999999998653

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.62  E-value=1.4e-14  Score=101.72  Aligned_cols=119  Identities=12%  Similarity=0.058  Sum_probs=77.2

Q ss_pred             eceEEEEeCC--HHHHHHHHHHhhCCEEeeecC-------C-Ccc--eEEEEeCCeeEEEeecCCCCcccCCCC-CCcce
Q 042945            6 LNHVSFVSKS--VEKSVMFYEQVLGFVMIKRPS-------F-NFE--GAWLFNHGIGIHLLESDKAPEKRGKIN-PKDNH   72 (172)
Q Consensus         6 i~hv~l~v~D--~~~a~~FY~~~LG~~~~~~~~-------~-~~~--~~~~~~~~~~l~l~~~~~~~~~~~~~~-~g~~~   72 (172)
                      -.+..|.|.|  +++|++||+++||+++.....       . ...  ...+..++..+.+.........+.... ....+
T Consensus        25 ~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~~~~~~~~~~~~~~g~~  104 (166)
T 1xy7_A           25 EFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVT  104 (166)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCCCTTSCCCE
T ss_pred             eEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCCcccCCccccCCCCcEE
Confidence            3568899999  999999999999999875321       0 011  112233444555443211100001000 23458


Q ss_pred             EEEEeCCHHHHHHHHHhCCCeEeeceeecC-CeeEEEEEEECCCCCEEEEEeecC
Q 042945           73 ISFQCSDMKLVMRKLEEMNIEYETAVVDEG-GIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        73 v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~-~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      ++|.|+|+++++++|+++|++ ..++.+.. +| .+.++++||+||.|+|++..+
T Consensus       105 l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~-~r~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A          105 FLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL-GFKGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             EEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT-TEEEEEECTTSCEEEEEC---
T ss_pred             EEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc-cEEEEEECCCCCEEEEEeecC
Confidence            999999999999999999999 87776540 24 488999999999999998543

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.62  E-value=1.8e-14  Score=109.13  Aligned_cols=112  Identities=11%  Similarity=0.016  Sum_probs=78.8

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCC----eeEEEeecCCCCcccCCCCCCcceEEEEeC-CH
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHG----IGIHLLESDKAPEKRGKINPKDNHISFQCS-DM   80 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~-dl   80 (172)
                      ..++.+.|.|+++|++||+++||++.............+..++    ..+.+...+      ........+++|.|+ |+
T Consensus       184 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~v~~dv  257 (301)
T 2zw5_A          184 AVITELPVRDVAATLRLVEAALGARTAFAIGDPPEFAEAALTPWSAGPRFRLAAVP------GPGPVEPVRLHLDAAGTA  257 (301)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHSCCEEEEEEETTEEEEEEESSSSSSSSEEEEEECC------CSSCCCCCEEEEEEESCH
T ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCCccEEEEEcCCCccccccccccCC------CcCCCCceEEEEEcCccH
Confidence            3578899999999999999999999874321111111222222    222221111      111223468999999 99


Q ss_pred             HHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           81 KLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        81 ~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +++++++.++|+++..+|.... ||.+.++++|||||.|+|+++
T Consensus       258 d~~~~~~~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          258 DSLHRRAVDAGARVDGPPVRRP-WGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             HHHHHHHHHTTCCEEEEEEECT-TSCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHcCCccccCcccCC-CcceEEEEECCCCCEEEeeCC
Confidence            9999999999999988776644 566889999999999999973

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.61  E-value=8.7e-15  Score=114.77  Aligned_cols=143  Identities=20%  Similarity=0.261  Sum_probs=93.1

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeec--CCC-cceEEEEeCCee--EEEeecCCCCcccCCCCCCcceEEEE
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP--SFN-FEGAWLFNHGIG--IHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~~~-~~~~~~~~~~~~--l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      .+.+|+||+|.|.|++++..||+. |||.+....  ... ....|+...+..  +.+..         ...++.+|++|+
T Consensus       149 ~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~---------~~~~~lhHvaf~  218 (365)
T 4ghg_A          149 ELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTG---------GNGPRLHHVAFS  218 (365)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSCSEEEEE---------SSBSEEEEEEEE
T ss_pred             cCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcccceeeec---------CCCCceeEEEEe
Confidence            357899999999999999999976 999887653  111 122333333222  22221         123468999999


Q ss_pred             eCCHHH---HHHHHHhCCCe--EeeceeecCCeeEEEEEEECCCCCEEEEEeecCCC---CCCCCCCCCCCccccccccc
Q 042945           77 CSDMKL---VMRKLEEMNIE--YETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLP---VLPLSSCPLKLPSKRSSEKA  148 (172)
Q Consensus        77 v~dl~~---~~~~l~~~G~~--i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~---~~~~~~~~~~~~~~~~~~~~  148 (172)
                      |+|+++   ..++|.++|+.  +...|.+..-....++|++||+||++|+.+.....   .-++..+..........||.
T Consensus       219 v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~~i~d~d~~p~~W~~~~~~~~~~WG~  298 (365)
T 4ghg_A          219 THEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDYYTGDPDNPTITWNVHDNQRRDWWGN  298 (365)
T ss_dssp             CSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCCCCSTTCCCEEEETTBTTSSSTTCC
T ss_pred             cCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCcCccCCCCCccccccCCCccccccCc
Confidence            997765   55788889874  55566654422357899999999999999876542   21222222222345567898


Q ss_pred             ccchHH
Q 042945          149 ACSGEV  154 (172)
Q Consensus       149 ~~~~~~  154 (172)
                      ..|...
T Consensus       299 ~~p~sf  304 (365)
T 4ghg_A          299 PVVPSW  304 (365)
T ss_dssp             CCCHHH
T ss_pred             CCCcCh
Confidence            887654

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.61  E-value=3.9e-15  Score=116.29  Aligned_cols=123  Identities=19%  Similarity=0.334  Sum_probs=86.9

Q ss_pred             CcceeceEEEEeC--CHHHHHHHHHHhhCCEEeeecC--CCc---ceEEEEe--CCeeEEEeecCCCCccc-------CC
Q 042945            2 PILSLNHVSFVSK--SVEKSVMFYEQVLGFVMIKRPS--FNF---EGAWLFN--HGIGIHLLESDKAPEKR-------GK   65 (172)
Q Consensus         2 ~~~~i~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~--~~~---~~~~~~~--~~~~l~l~~~~~~~~~~-------~~   65 (172)
                      .+++|+|+.+.|.  |++++++||+++|||+.....+  ...   ...++..  +...+.+.+........       ..
T Consensus       155 ~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~  234 (357)
T 2r5v_A          155 DLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLKDH  234 (357)
T ss_dssp             CCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHHHHH
T ss_pred             CcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHHHhc
Confidence            4678999999999  9999999999999999875421  111   2233433  23567777654211000       01


Q ss_pred             CCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeec------------CCee----EEEEEEECCCCCEEEEEee
Q 042945           66 INPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDE------------GGIQ----VDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        66 ~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~------------~~~g----~~~~~~~DPdG~~iei~~~  124 (172)
                      ..+|.+||||.|+|+++++++|+++|+++...|...            ..++    ...+|++||||+++||++.
T Consensus       235 ~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          235 QGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             TSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             CCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence            245778999999999999999999999987765210            0111    1369999999999999984

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.60  E-value=2.6e-14  Score=112.69  Aligned_cols=125  Identities=10%  Similarity=0.051  Sum_probs=91.8

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC---C--CcceEEEEeCCeeEEEeecCCCCcc--------cCCCC
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS---F--NFEGAWLFNHGIGIHLLESDKAPEK--------RGKIN   67 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~--~~~~~~~~~~~~~l~l~~~~~~~~~--------~~~~~   67 (172)
                      |.+++|+||.|.|.|++++++||+++|||+...+..   .  .........+...+.+.....+...        ...++
T Consensus        18 ~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g   97 (381)
T 1t47_A           18 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHG   97 (381)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHC
T ss_pred             CcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHhcC
Confidence            568899999999999999999999999999987521   1  1122233344566767664221110        01124


Q ss_pred             CCcceEEEEeCCHHHHHHHHHhCCCeEeeceeec--CCeeEEEEEEECCCCCEEEEEeec
Q 042945           68 PKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDE--GGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        68 ~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~--~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      .+..|++|+|+|+++++++|+++|+++..+|...  .....+.+.++||+|+.++|++..
T Consensus        98 ~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A           98 DGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            5788999999999999999999999998777531  222346789999999999999864

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.58  E-value=4.1e-13  Score=92.52  Aligned_cols=115  Identities=10%  Similarity=-0.038  Sum_probs=78.5

Q ss_pred             eEEEEeC-CHHHHHHHHHHhhCCEEeeec---CC------C----cceEE--EEeCCeeEEEeecCCCCcccCCCCCCcc
Q 042945            8 HVSFVSK-SVEKSVMFYEQVLGFVMIKRP---SF------N----FEGAW--LFNHGIGIHLLESDKAPEKRGKINPKDN   71 (172)
Q Consensus         8 hv~l~v~-D~~~a~~FY~~~LG~~~~~~~---~~------~----~~~~~--~~~~~~~l~l~~~~~~~~~~~~~~~g~~   71 (172)
                      +..|.|. |+++|++||+++||+++....   +.      .    ....+  +..++..+.+.... ... ......+ .
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~-~~~-~~~~~~g-~   82 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNH-PAY-PYEGIKG-C   82 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECC-TTS-CCCCCCS-E
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCC-Ccc-CCCCCCc-e
Confidence            4788898 999999999999999987531   10      0    11122  22344444444321 110 0111222 6


Q ss_pred             eEEEEeCC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           72 HISFQCSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        72 ~v~~~v~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      +++|.|+|   +++++++|. .|.++..++.+. .||.+.++++||+|+.|+|.+....
T Consensus        83 ~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~-~wG~r~~~v~Dp~G~~w~l~~~~~~  139 (149)
T 1u6l_A           83 SISLNVDSKAEAERLFNALA-EGGSVQMPLGPT-FWAASFGMFTDRFGVAWMVNCEQDR  139 (149)
T ss_dssp             EEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEE-TTEEEEEEEECTTSCEEEEEESCC-
T ss_pred             EEEEEcCCHHHHHHHHHHHH-CCCEEeeccccc-CcccceEEEECCCCCEEEEEEeccc
Confidence            89999998   889999985 799998888664 4777889999999999999985443

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.56  E-value=3.5e-13  Score=91.37  Aligned_cols=113  Identities=10%  Similarity=0.028  Sum_probs=78.1

Q ss_pred             eeceEEEEeC--CHHHHHHHHHHhh-CCEEeee--c-CC----CcceEE--EEeCCeeEEEeecCCCCcccCCCCCCcce
Q 042945            5 SLNHVSFVSK--SVEKSVMFYEQVL-GFVMIKR--P-SF----NFEGAW--LFNHGIGIHLLESDKAPEKRGKINPKDNH   72 (172)
Q Consensus         5 ~i~hv~l~v~--D~~~a~~FY~~~L-G~~~~~~--~-~~----~~~~~~--~~~~~~~l~l~~~~~~~~~~~~~~~g~~~   72 (172)
                      ++. ..|.+.  |.++|++||+++| |+++...  . +.    .....+  +..++..+.+......+.   ........
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~---~~~~~~~~   81 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHA---FDFTPAFS   81 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCS---CCCCTTEE
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCCCC---CCCCCceE
Confidence            444 678886  9999999999999 9998742  1 11    111112  233444444433221111   11223468


Q ss_pred             EEEEeCC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           73 ISFQCSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        73 v~~~v~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      ++|.|+|   +++++++|. +|.++..++.+. +||.+.++++||+|+.|+|.+
T Consensus        82 l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~-~~G~~~~~~~Dp~G~~w~l~~  133 (136)
T 1u7i_A           82 FFVDCESNAQIERLAEALS-DGGKALMPLGDY-GFSQRFAWLADRFGVSWQLNL  133 (136)
T ss_dssp             EEEECCCHHHHHHHHHHHH-TTSEEEEEEECC-SSSSEEEEEECTTSCEEEEEE
T ss_pred             EEEEcCCHHHHHHHHHHHH-cCCEEecccccC-CCcceEEEEECCCCCEEEEEe
Confidence            9999999   999999999 999999887664 467788999999999999986

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.56  E-value=5.6e-14  Score=109.69  Aligned_cols=126  Identities=10%  Similarity=0.054  Sum_probs=90.0

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC-CCcceEEEEeCCeeEEEeecCCCCc-c---cCCCCCCcceEEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEGAWLFNHGIGIHLLESDKAPE-K---RGKINPKDNHISF   75 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-~~~~~~~~~~~~~~l~l~~~~~~~~-~---~~~~~~g~~~v~~   75 (172)
                      |++++|+||.+.|.|++++.+||++.|||+...+.. .+.....+..+...+.+..+..+.. .   ...++.+..|++|
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~iaf   80 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADHRSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADIAM   80 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEEEE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCceEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEEEE
Confidence            789999999999999999999999999999986531 1112222334455566654321111 0   0112457789999


Q ss_pred             EeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           76 QCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        76 ~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      .|+|++++++++.++|+++..+|....+...+.+.++||+|..++|++...
T Consensus        81 ~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~  131 (357)
T 2r5v_A           81 ATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDG  131 (357)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCS
T ss_pred             EECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEeccc
Confidence            999999999999999999987775322212356889999999999998643

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.53  E-value=1.8e-13  Score=109.16  Aligned_cols=126  Identities=6%  Similarity=0.002  Sum_probs=91.7

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC-----cceEEEEeCCeeEEEeecCCCCc------------c-
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN-----FEGAWLFNHGIGIHLLESDKAPE------------K-   62 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-----~~~~~~~~~~~~l~l~~~~~~~~------------~-   62 (172)
                      |++++|+||.|.|.|+++|++||++.|||++..+.+.+     ....++..++..+.+..+..+..            . 
T Consensus        21 ~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~p~~  100 (424)
T 1sqd_A           21 FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIP  100 (424)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSST
T ss_pred             ccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCcccccccccccccccc
Confidence            56789999999999999999999999999988763211     11223334556677776532210            0 


Q ss_pred             ----c------CCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           63 ----R------GKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        63 ----~------~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                          .      ..++++..|+||+|+|+++++++++++|+++..+|....+ +.+...+++|+|+.++|++....
T Consensus       101 ~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A          101 SFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             TCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             cccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCC
Confidence                0      0123678899999999999999999999999888765432 24567778888999998876544

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.52  E-value=5.2e-13  Score=91.06  Aligned_cols=115  Identities=10%  Similarity=0.072  Sum_probs=78.7

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhh-CCEEeeec---CC----CcceEE--EEeCCeeEEEeecCCCCcccCCCCCCc
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVL-GFVMIKRP---SF----NFEGAW--LFNHGIGIHLLESDKAPEKRGKINPKD   70 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~L-G~~~~~~~---~~----~~~~~~--~~~~~~~l~l~~~~~~~~~~~~~~~g~   70 (172)
                      |++++|....+.+.|.++|++||+++| |+++....   +.    +.....  +..++..+.+....  +..    ... 
T Consensus         1 M~~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~--~~~----~~~-   73 (139)
T 1tsj_A            1 MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDAN--SGT----ELP-   73 (139)
T ss_dssp             CCCCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC-------------C-
T ss_pred             CCCCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCC--CCC----Cce-
Confidence            677778777777779999999999999 99987421   11    111111  22233333332211  111    112 


Q ss_pred             ceEEEEeCC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           71 NHISFQCSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        71 ~~v~~~v~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      ..+++.|+|   +++++++|. .|.++..++.+. .||.+..+++||+|+.|+|...
T Consensus        74 ~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~-~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           74 ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNM-PPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEE-TTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEEECCCHHHHHHHHHHHh-CCCEEeeccccc-CCCceEEEEECCCCCEEEEeec
Confidence            578999987   788899998 699999888664 4788999999999999999974

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.44  E-value=1.1e-12  Score=104.49  Aligned_cols=125  Identities=10%  Similarity=0.063  Sum_probs=90.3

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC-----CcceEEEEeCCeeEEEeecCCCCc------------c-
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF-----NFEGAWLFNHGIGIHLLESDKAPE------------K-   62 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-----~~~~~~~~~~~~~l~l~~~~~~~~------------~-   62 (172)
                      |.+++|+||.|.|.|++++.+||++.|||+...+...     ......+..++..+.+........            . 
T Consensus        27 ~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~~~  106 (418)
T 1sp8_A           27 FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAA  106 (418)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHH
T ss_pred             ccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCcccccccccccccchh
Confidence            5678999999999999999999999999998876321     122233344566777776532210            0 


Q ss_pred             ----cCCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           63 ----RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        63 ----~~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                          ...+++|..|++|+|+|+++++++++++|+++..+|....+ +.+...+++|.|..++|++...
T Consensus       107 ~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~~  173 (418)
T 1sp8_A          107 ARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPD  173 (418)
T ss_dssp             HHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCT
T ss_pred             HHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccC-ceEEEEEecCCCEEEEEEccCC
Confidence                00124678999999999999999999999998887754322 2355677888888888887653

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.43  E-value=1.1e-12  Score=103.34  Aligned_cols=122  Identities=17%  Similarity=0.246  Sum_probs=84.6

Q ss_pred             cceeceEEEEeC--CHHHHHHHHHHhhCCEEeeecC-----CCc---ceEEEEe--CCeeEEEeecCCCCccc-------
Q 042945            3 ILSLNHVSFVSK--SVEKSVMFYEQVLGFVMIKRPS-----FNF---EGAWLFN--HGIGIHLLESDKAPEKR-------   63 (172)
Q Consensus         3 ~~~i~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~-----~~~---~~~~~~~--~~~~l~l~~~~~~~~~~-------   63 (172)
                      +.+|+|+++.|.  |++++++||+++|||+.....+     ...   ...++..  +...+.+.++.......       
T Consensus       182 ~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~~~l~  261 (381)
T 1t47_A          182 FQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLE  261 (381)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHH
T ss_pred             ceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHHHHHH
Confidence            578999999999  9999999999999999876521     111   1122222  23456676654211110       


Q ss_pred             CCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCC------------e----eEEEEEEECCCCCEEEEEee
Q 042945           64 GKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGG------------I----QVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        64 ~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~------------~----g~~~~~~~DPdG~~iei~~~  124 (172)
                      ...++|.+||||.|+|+++++++|+++|+++...|.....            +    ....++-+||+|++++|.+.
T Consensus       262 ~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift~  338 (381)
T 1t47_A          262 FYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTK  338 (381)
T ss_dssp             HHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBC
T ss_pred             HhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEecc
Confidence            0124578999999999999999999999998876632211            0    01137889999999999973

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.40  E-value=3.3e-12  Score=100.79  Aligned_cols=125  Identities=14%  Similarity=0.129  Sum_probs=92.4

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC--Ccc---eEEEEeCCeeEEEeecCCCCc-cc----CCCCCCcc
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF--NFE---GAWLFNHGIGIHLLESDKAPE-KR----GKINPKDN   71 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~---~~~~~~~~~~l~l~~~~~~~~-~~----~~~~~g~~   71 (172)
                      .+++|+||.|.|.|++++.+||++.|||+.......  +..   ...+..++..+.+..+..+.. ..    ..++++..
T Consensus         8 ~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG~Gv~   87 (393)
T 3isq_A            8 RFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHGDGVK   87 (393)
T ss_dssp             EEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEE
T ss_pred             CCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhcCCcEE
Confidence            568999999999999999999999999999875321  111   223345567777776432221 00    11356788


Q ss_pred             eEEEEeCCHHHHHHHHHhCCCeEeeceeecC-Ce-eEEEEEEECCCCCEEEEEeecC
Q 042945           72 HISFQCSDMKLVMRKLEEMNIEYETAVVDEG-GI-QVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        72 ~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~-~~-g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      |+||.|+|+++++++++++|+++..+|.... +. ..+...+++|.|..+.|++...
T Consensus        88 ~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~  144 (393)
T 3isq_A           88 DIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMN  144 (393)
T ss_dssp             EEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEES
T ss_pred             EEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecccc
Confidence            9999999999999999999999998885432 12 2467889999999999998643

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.40  E-value=2.5e-11  Score=85.32  Aligned_cols=112  Identities=14%  Similarity=0.120  Sum_probs=77.5

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCEEeeecCC---------------Ccc--eEEEEeCCeeEEEeecCCCCcccCCCCCCc
Q 042945            8 HVSFVSKSVEKSVMFYEQVLGFVMIKRPSF---------------NFE--GAWLFNHGIGIHLLESDKAPEKRGKINPKD   70 (172)
Q Consensus         8 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~---------------~~~--~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~   70 (172)
                      ...|.+.|.++|++||+++||.++.....+               ...  ...+..++..+.+.......    ...++.
T Consensus        28 ~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~g~~----~~~~~~  103 (172)
T 3l20_A           28 FPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFGRA----DKINNG  103 (172)
T ss_dssp             EEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECTTCC----CCCCSS
T ss_pred             EEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCCCCC----CCCCCc
Confidence            456777799999999999999997654211               011  12223355556555432111    112234


Q ss_pred             ceEEEEe--------CCHHHHHHHHHhCC-CeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           71 NHISFQC--------SDMKLVMRKLEEMN-IEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        71 ~~v~~~v--------~dl~~~~~~l~~~G-~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      ..+++.+        +|+++++++|.+.| +++..++.+. .||.+..+++||+|+.|+|...
T Consensus       104 ~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~-~wG~r~g~v~DpfG~~W~i~~~  165 (172)
T 3l20_A          104 ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQ-FWGGKMGVFTDKYGVRWMLHGQ  165 (172)
T ss_dssp             EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEEC-TTSSEEEEEECTTSCEEEEEEE
T ss_pred             EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCcccc-CCCcEEEEEECCCCCEEEEEeC
Confidence            5667766        58999999999999 7999877654 4677889999999999999874

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.35  E-value=8.2e-13  Score=103.21  Aligned_cols=124  Identities=15%  Similarity=0.162  Sum_probs=84.7

Q ss_pred             CcceeceEEEEeC--CHHHHHHHHHHhhCCEEeeecCC--Ccce---EEEE--eCCeeEEEeec-CCCCccc-----CCC
Q 042945            2 PILSLNHVSFVSK--SVEKSVMFYEQVLGFVMIKRPSF--NFEG---AWLF--NHGIGIHLLES-DKAPEKR-----GKI   66 (172)
Q Consensus         2 ~~~~i~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~--~~~~---~~~~--~~~~~l~l~~~-~~~~~~~-----~~~   66 (172)
                      .+.+|+||++.|.  |++++++||+++|||+.....+.  ...+   ....  .+...+++.++ .......     ...
T Consensus       155 ~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~~~~  234 (357)
T 1cjx_A          155 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFN  234 (357)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             CeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHHhcC
Confidence            3578999999999  99999999999999998765311  1111   1121  23456777766 3221110     113


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHhCCCeEee-ceee--------cCCeeE--------EEEEEEC----CCCCEEEEEeec
Q 042945           67 NPKDNHISFQCSDMKLVMRKLEEMNIEYET-AVVD--------EGGIQV--------DQLFFHD----PDGYMIEICNCQ  125 (172)
Q Consensus        67 ~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~-~~~~--------~~~~g~--------~~~~~~D----PdG~~iei~~~~  125 (172)
                      ++|.+|+||.|+|++++.++|+++|+++.. .|..        ....+.        ..++.+|    |+|++++|.+..
T Consensus       235 g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift~~  314 (357)
T 1cjx_A          235 GEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFSET  314 (357)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEBCC
T ss_pred             CCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEeccC
Confidence            457899999999999999999999999877 4510        011110        1377788    899999999743

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.33  E-value=1.8e-10  Score=78.28  Aligned_cols=110  Identities=11%  Similarity=0.071  Sum_probs=75.1

Q ss_pred             EEEEeC-CHHHHHHHHHHhhC-CEEeee---cC----CCcc--eEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            9 VSFVSK-SVEKSVMFYEQVLG-FVMIKR---PS----FNFE--GAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         9 v~l~v~-D~~~a~~FY~~~LG-~~~~~~---~~----~~~~--~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      ..|.+. |.+++++||+++|| .++...   .+    ....  ...+..++..+.+.......   ....+....+++.|
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~~---~~~~~~~~~l~l~~   89 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNH---NFTFTPAMSLYVTC   89 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSCC---SCCCCTTSCEEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCCC---CCCCCCCEEEEEEc
Confidence            466777 89999999999999 565432   11    1111  12333455556555432211   11122346899999


Q ss_pred             CC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           78 SD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        78 ~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      +|   +++++++|. .|.++..++.+.. ||.+..+++||+|+.|.|..
T Consensus        90 ~d~~evd~~~~~l~-~Gg~v~~p~~~~~-wg~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           90 ETEEEIDTVFHKLA-QDGAILMPLGSYP-FSKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             SSHHHHHHHHHHHH-TTCEEEEEEEEET-TEEEEEEEECTTSCEEEEEE
T ss_pred             CCHHHHHHHHHHHH-cCCeEecCccccc-CCcEEEEEECCCCCEEEEEe
Confidence            99   999999995 5889888776544 67789999999999999985

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.33  E-value=3.3e-12  Score=99.75  Aligned_cols=122  Identities=10%  Similarity=0.131  Sum_probs=85.4

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcc--cCCCCCCcceEEEEeC
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEK--RGKINPKDNHISFQCS   78 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~--~~~~~~g~~~v~~~v~   78 (172)
                      |.+++++||.+.|.|++++.+|| +.|||++..+.. +........+...+.+...+.....  ...++++..|++|+|+
T Consensus         8 ~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~-~~~~~l~~~g~~~l~l~~~~~~~~~~~~~~~g~gv~~iaf~V~   85 (357)
T 1cjx_A            8 MGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHR-SKNVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGMAFRVK   85 (357)
T ss_dssp             TCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEES-SSSEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEEEEEEES
T ss_pred             cccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeC-CeeEEEEecCCEEEEEECCCCchhhhhhhhcCCeEEEEEEEeC
Confidence            67899999999999999999999 789999987642 1222233344555544432211100  0112467889999999


Q ss_pred             CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           79 DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        79 dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      |++++++++.+.|+++...+... + ......+++|+|..++|++...
T Consensus        86 D~~~~~~~l~~~G~~~~~~~~~~-g-~~~~~~~~~~gg~~~~~vd~~~  131 (357)
T 1cjx_A           86 DSQKAYNRALELGAQPIHIDTGP-M-ELNLPAIKGIGGAPLYLIDRFG  131 (357)
T ss_dssp             CHHHHHHHHHHTTCCBCCCCCCT-T-CBCCCEEECGGGCEEEEECCCS
T ss_pred             CHHHHHHHHHHcCCEEeecCCCC-C-cEEEEeeeCCCCeEEEEECCCC
Confidence            99999999999999987765321 1 1245677889888888886543

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.25  E-value=1.6e-10  Score=84.56  Aligned_cols=115  Identities=10%  Similarity=0.025  Sum_probs=76.3

Q ss_pred             eceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCee-EEEeecCCCCcccCCCCCCcceE---EEEeCCHH
Q 042945            6 LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG-IHLLESDKAPEKRGKINPKDNHI---SFQCSDMK   81 (172)
Q Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~-l~l~~~~~~~~~~~~~~~g~~~v---~~~v~dl~   81 (172)
                      ..+..|+|.|.++.++||+++|||++..+.   ...+.+...+.. +-+++..+.  .......|..|+   ++.|++-.
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee---~~~a~lg~~~~~~~L~lEEsp~--~~~~~~~Glkh~a~i~i~vp~~~   85 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEE---SAFLSLGDQTGLEKLVLEEAPS--MRTRKVEGRKKLARLIVKVENPL   85 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEEC---SSEEEEECTTCCEEEEEEECCT--TTCBCCCSSCSEEEEEEEESSHH
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeecc---CcEEEeecCCCcceEEEEeCCC--cccccccccceeeeEEEEcCCHH
Confidence            456789999999999999999999998874   234445444333 323333221  122345677888   49999888


Q ss_pred             HHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCCC
Q 042945           82 LVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPV  129 (172)
Q Consensus        82 ~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~~  129 (172)
                      ++.+-|.. +..+.. .....  ..+++|+.||+||.|||....+...
T Consensus        86 el~~lL~~-~~~~~~-~~~gd--hgyA~yl~dPEGn~ieiyae~d~~~  129 (244)
T 3e0r_A           86 EIEGILSK-TDSIHR-LYKGQ--NGYAFEIFSPEDDLILIHAEDDIAS  129 (244)
T ss_dssp             HHHHHHTT-CSCCSE-EEECS--SSEEEEEECTTCCEEEEECCSCGGG
T ss_pred             HHHHHHhc-cccccc-ccccC--CcEEEEEECCCCCeEEEEEcCCHHH
Confidence            77766655 544432 11111  1257999999999999998666543

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.21  E-value=6.7e-11  Score=93.34  Aligned_cols=145  Identities=16%  Similarity=0.195  Sum_probs=95.1

Q ss_pred             cceeceEEEEeCC--HHHHHHHHHHhhCCEEeeecC---CC--cce---EEEEe--CCeeEEEeecCCCCccc-------
Q 042945            3 ILSLNHVSFVSKS--VEKSVMFYEQVLGFVMIKRPS---FN--FEG---AWLFN--HGIGIHLLESDKAPEKR-------   63 (172)
Q Consensus         3 ~~~i~hv~l~v~D--~~~a~~FY~~~LG~~~~~~~~---~~--~~~---~~~~~--~~~~l~l~~~~~~~~~~-------   63 (172)
                      +++|+||++.|.|  ++++++||+++|||+.....+   ..  ..+   ..+..  +...+.|.++.......       
T Consensus       171 l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~~fL~  250 (393)
T 3isq_A          171 LEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQEYVD  250 (393)
T ss_dssp             EEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHHHHHH
T ss_pred             eeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHHHHHH
Confidence            5789999999998  999999999999999876522   11  111   11221  23578888765311111       


Q ss_pred             CCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceee----------c------CCe----eEEEEEEECCCCCEEEEEe
Q 042945           64 GKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVD----------E------GGI----QVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        64 ~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~----------~------~~~----g~~~~~~~DPdG~~iei~~  123 (172)
                      ...++|.+||||.|+|+.+..++|+++|+++...|..          .      ..+    ....++-+|.+|+++.|.+
T Consensus       251 ~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P~~YY~~l~~r~~~~~~~~~e~~~~l~~~~IL~D~d~~g~llQifT  330 (393)
T 3isq_A          251 YNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPSTYYKQLREKLKTAKIKVKENIDALEELKILVDYDEKGYLLQIFT  330 (393)
T ss_dssp             HHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCHHHHHHHHHHHTTCSSCCCSCHHHHHHHTCEEEECSSCEEEEEEB
T ss_pred             HcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCCccHHHHHHHHhccccccccccHHHHHhcCcEEccCCCceEEEEEe
Confidence            0136678999999999999999999999998876611          0      001    0123677888999999997


Q ss_pred             ecCCCCCCCCCCCCCCccccccccc
Q 042945          124 CQNLPVLPLSSCPLKLPSKRSSEKA  148 (172)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~  148 (172)
                      .. ....+.......+|....+||.
T Consensus       331 ~~-~~~rpt~FfEiIqR~g~~GFG~  354 (393)
T 3isq_A          331 KP-VQDRPTLFLEVIQRHNHQGFGA  354 (393)
T ss_dssp             CC-SSSSSCCEEEEEEEESCCSCCH
T ss_pred             ec-cCCCCceEEEEEEEcCCCccCh
Confidence            43 3333333344445555555553

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.19  E-value=1.3e-10  Score=92.55  Aligned_cols=122  Identities=15%  Similarity=0.248  Sum_probs=83.0

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC--------cceEEEEe--CCeeEEEeecCCC---Cccc-----C
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN--------FEGAWLFN--HGIGIHLLESDKA---PEKR-----G   64 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~--------~~~~~~~~--~~~~l~l~~~~~~---~~~~-----~   64 (172)
                      +.+|+||++.|.|++++++||+++|||+...+.+..        ....++..  +...+.+.++...   ....     .
T Consensus       197 ~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~fl~~  276 (418)
T 1sp8_A          197 LSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDH  276 (418)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHHH
T ss_pred             cceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhhhhhc
Confidence            578999999999999999999999999998753211        12233322  2355667665321   1100     0


Q ss_pred             CCCCCcceEEEEeCCHHHHHHHHHh----CCCeEeeceeecC--------C-------e----eEEEEEEECCCCCEEEE
Q 042945           65 KINPKDNHISFQCSDMKLVMRKLEE----MNIEYETAVVDEG--------G-------I----QVDQLFFHDPDGYMIEI  121 (172)
Q Consensus        65 ~~~~g~~~v~~~v~dl~~~~~~l~~----~G~~i~~~~~~~~--------~-------~----g~~~~~~~DPdG~~iei  121 (172)
                      ..++|.+||||.|+|++++.++|++    +|+++...|....        +       +    ....++-+|.+|+++.|
T Consensus       277 ~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~Pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~llqi  356 (418)
T 1sp8_A          277 HGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPTSDYYDGVRRRAGDVLTEAQIKECQELGVLVDRDDQGVLLQI  356 (418)
T ss_dssp             HTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEEEEE
T ss_pred             cCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCCCcchhHHHHHhhccccchhhHHHHHHhCcEEecCCCCeEEEE
Confidence            1356789999999999999999999    8999887640000        0       0    01125677888888888


Q ss_pred             Eee
Q 042945          122 CNC  124 (172)
Q Consensus       122 ~~~  124 (172)
                      .+.
T Consensus       357 ft~  359 (418)
T 1sp8_A          357 FTK  359 (418)
T ss_dssp             EBC
T ss_pred             Eec
Confidence            863

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.18  E-value=7.4e-11  Score=94.10  Aligned_cols=122  Identities=14%  Similarity=0.179  Sum_probs=84.0

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC--------cceEEEEe--CCeeEEEeecCC---CCccc-----C
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN--------FEGAWLFN--HGIGIHLLESDK---APEKR-----G   64 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~--------~~~~~~~~--~~~~l~l~~~~~---~~~~~-----~   64 (172)
                      +.+|+||++.|.|++++++||+++|||+...+.+..        ....++..  +...+.+.++..   .....     .
T Consensus       200 ~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~fl~~  279 (424)
T 1sqd_A          200 IRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEH  279 (424)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHHHH
T ss_pred             cceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhhhhhhh
Confidence            578999999999999999999999999998764211        11223322  235677777641   11111     0


Q ss_pred             CCCCCcceEEEEeCCHHHHHHHHHh----CCCeEeece-eec-------CC-------e----eEEEEEEECCCCCEEEE
Q 042945           65 KINPKDNHISFQCSDMKLVMRKLEE----MNIEYETAV-VDE-------GG-------I----QVDQLFFHDPDGYMIEI  121 (172)
Q Consensus        65 ~~~~g~~~v~~~v~dl~~~~~~l~~----~G~~i~~~~-~~~-------~~-------~----g~~~~~~~DPdG~~iei  121 (172)
                      ..++|.+||||.|+|+.++.++|++    +|+++...| ..-       -+       +    ....++-+|.+|+++.|
T Consensus       280 ~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~llqi  359 (424)
T 1sqd_A          280 NEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQI  359 (424)
T ss_dssp             HTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEEEEE
T ss_pred             cCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCCCcchhHHHHHhhccccchhhHHHHHHcCeEEecCCCCeEEEE
Confidence            1356889999999999999999999    899988754 110       00       0    01136778989999999


Q ss_pred             Eee
Q 042945          122 CNC  124 (172)
Q Consensus       122 ~~~  124 (172)
                      .+.
T Consensus       360 ft~  362 (424)
T 1sqd_A          360 FTK  362 (424)
T ss_dssp             EBC
T ss_pred             Ecc
Confidence            973

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.30  E-value=3.1e-05  Score=53.65  Aligned_cols=100  Identities=11%  Similarity=0.040  Sum_probs=64.3

Q ss_pred             EEEEeC-CHHHHHHHHHHhh-CCEEeee---cCC---C-cce---EEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            9 VSFVSK-SVEKSVMFYEQVL-GFVMIKR---PSF---N-FEG---AWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         9 v~l~v~-D~~~a~~FY~~~L-G~~~~~~---~~~---~-~~~---~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      ..|... |.+++++||+++| |.++...   .+.   . ...   .-+..++..+.+....+ .   . .......+++.
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~p-~---~-~~~~~~sl~v~   83 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGP-A---F-RHSEAFSFQVA   83 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCT-T---C-CCCTTEEEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCCC-C---c-CCCCceEEEEE
Confidence            456666 9999999999999 9987742   110   0 111   22233455554543221 1   1 12233578888


Q ss_pred             eCC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           77 CSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        77 v~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      |+|   +++++++|.+.|.++.     ..      .+++||.|+.|.|...
T Consensus        84 ~~d~~e~d~~~~~L~~~Gg~v~-----~~------G~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           84 TDDQAETDRLWNAIVDNGGEES-----AC------GWCRDKWGISWQITPR  123 (163)
T ss_dssp             ESSHHHHHHHHHHHHHTTCEEC-----ST------TEEECTTSCEEEEEEH
T ss_pred             eCCHHHHHHHHHHHHhCCCEEE-----EE------EEEECCCCCEEEEEeE
Confidence            886   7888999997787766     22      3679999999999963

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.21  E-value=6.1e-06  Score=70.79  Aligned_cols=120  Identities=18%  Similarity=0.271  Sum_probs=74.1

Q ss_pred             ceeceEEEEe---CCHHHHHHHHHHhhCCEEeeecCCCcceEEEE--eCCeeEEEeec-CCCCc--------------cc
Q 042945            4 LSLNHVSFVS---KSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLF--NHGIGIHLLES-DKAPE--------------KR   63 (172)
Q Consensus         4 ~~i~hv~l~v---~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~--~~~~~l~l~~~-~~~~~--------------~~   63 (172)
                      .+...+.+..   .-+++++.||.+++++......+..--..++.  .+...+++.-. .+...              ..
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (941)
T 3opy_B            8 NGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSNQKLFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNLTRSLY   87 (941)
T ss_dssp             CEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCSCCC---EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCCC----
T ss_pred             cceeEEEEEeCCHHHHHHHHHHHHhhccceeccccCCcceeEEEecCCCeEEEEEEeccccchhHHHHHHHHhhhhcccc
Confidence            4566666666   45799999999999997665321100022331  12344554433 11100              00


Q ss_pred             CCC-CCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           64 GKI-NPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        64 ~~~-~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      ... .....|+.|.+.|++++.++|.+.+.++...|....   ...+|..||+||+|+|.+...
T Consensus        88 ~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~---~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           88 RKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEIS---PFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             ------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCS---CEEECCSSCCEEEECC-CCSS
T ss_pred             cccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCC---CceEEeECCCCCEEEEeccCC
Confidence            000 123359999999999999999999988777654333   367999999999999998765

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=97.71  E-value=0.00027  Score=53.04  Aligned_cols=86  Identities=15%  Similarity=0.198  Sum_probs=63.1

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhC-----CEEeee---cCCCcceEEEEeCCeeEEEeecCCCCc---------c---
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLG-----FVMIKR---PSFNFEGAWLFNHGIGIHLLESDKAPE---------K---   62 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG-----~~~~~~---~~~~~~~~~~~~~~~~l~l~~~~~~~~---------~---   62 (172)
                      ..+|+|+.+.|.+++        .||     |.+...   +.++.....+...+..+|++...+...         .   
T Consensus        22 ~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~YLElIai~~~~~~~~~~~~~~~~~~   93 (274)
T 3p8a_A           22 ILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGVA   93 (274)
T ss_dssp             CCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSSEEEEEEESCHHHHHHHTTSTGGGTC
T ss_pred             cccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCEEEEEEeecCcccccccccccCccch
Confidence            478999999999884        367     776653   245555555555888999998754210         0   


Q ss_pred             c------CCCCCCcceEEEEeCCHHHHHHHHHhCCCeEee
Q 042945           63 R------GKINPKDNHISFQCSDMKLVMRKLEEMNIEYET   96 (172)
Q Consensus        63 ~------~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~   96 (172)
                      .      ...++|..++++.++|+++..+++.+.|+....
T Consensus        94 f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A           94 FATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             TTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEE
T ss_pred             HHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCC
Confidence            0      123568899999999999999999999988664

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=97.35  E-value=0.0012  Score=48.74  Aligned_cols=32  Identities=13%  Similarity=0.217  Sum_probs=29.3

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeec
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP   35 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~   35 (172)
                      +++|+||+|.|.|++++.+|| +.||++...+.
T Consensus       156 i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~~  187 (252)
T 3pkv_A          156 LLSIGEINITTSDVEQAATRL-KQAELPVKLDQ  187 (252)
T ss_dssp             CCEEEEEEEECSCHHHHHHHH-HHTTCCCCGGG
T ss_pred             CcEeeeEEEEeCCHHHHHHHH-HHcCCCcccCC
Confidence            578999999999999999999 99999988753

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=96.66  E-value=0.0034  Score=45.98  Aligned_cols=90  Identities=10%  Similarity=0.073  Sum_probs=58.7

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeC--CHHH
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCS--DMKL   82 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~--dl~~   82 (172)
                      .+ ||.|.|.|..++  ||++ +|+        +....+....|.         ....+....-|+..+-|.|+  |+.+
T Consensus       152 ti-~I~LnV~d~~~s--Fy~~-~~~--------~~~~~F~~a~G~---------dl~~~~~~t~gLe~l~~~v~~~dl~~  210 (244)
T 3e0r_A          152 EI-SMELHLPTDIES--FLES-SEI--------GASLDFIPAQGQ---------DLTVDNTVTWDLSMLKFLVNELDIAS  210 (244)
T ss_dssp             EE-EEEEEECTTCCC--SCCH-HHH--------TTTEEEEECCCT---------TTTCCTTSBSSEEEEEEEESSCCHHH
T ss_pred             EE-EEEEEcCchHHH--Hhhc-cCC--------cccEEEEcccCC---------CCCCCCCCccCceEEEEEeCHHHHHH
Confidence            47 999999999998  9987 544        112333322111         11122233456677777776  7889


Q ss_pred             HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           83 VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        83 ~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      +.++|.+.|.-+..     ..   ..+.+.||.|+.|-|..
T Consensus       211 l~~~L~~~g~~idk-----k~---~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          211 LRQKFESTEYFIPK-----SE---KFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             HHHHTTTSCEECCT-----TC---CEEEEECTTSCEEEEEE
T ss_pred             HHHHHHhCCceEcc-----cC---CEEEEECCCCCEEEEEE
Confidence            99999998763222     11   45888999999988764

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=94.18  E-value=0.26  Score=31.46  Aligned_cols=58  Identities=21%  Similarity=0.356  Sum_probs=40.6

Q ss_pred             CCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           68 PKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        68 ~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      .+..|+++.|+|+++..+.....|.++..........+.+..++.. ++..+|+.+...
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~   63 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPDG   63 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEESS
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecCC
Confidence            3578999999999999998888898876543221222334455554 578899998543

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=93.08  E-value=0.69  Score=40.34  Aligned_cols=51  Identities=18%  Similarity=0.212  Sum_probs=37.4

Q ss_pred             ceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           71 NHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        71 ~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      ..+.|.+.|++++.+.|.+..+.  ..|....+   ..+|..||=||++.|.....
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~dp~~~~~~~~~~~~  175 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAE--IIPSKIDL---VEFSTRDPMGDVISFSSYPS  175 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCC--BCCCC--C---CCEEEESSSEEEEECCSSSC
T ss_pred             ceEEEEeCcHHHHHHHhhhcccc--cCCCCCCc---eeEEEecCCCCEEeeecCCC
Confidence            56899999999999999987222  22222122   45999999999999997665

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=91.89  E-value=1.8  Score=30.29  Aligned_cols=92  Identities=14%  Similarity=0.050  Sum_probs=57.2

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEe-eecCCCcceEEEE-------eCCeeEEEeecCCCCcccCCCCCCcceEEE
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMI-KRPSFNFEGAWLF-------NHGIGIHLLESDKAPEKRGKINPKDNHISF   75 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~-~~~~~~~~~~~~~-------~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~   75 (172)
                      ..++||.++|++.+.+.+|-+.++..-.. .+...+++-.++.       .++..+.+++.+.+.. +..+..|.-||.+
T Consensus        42 ~~~DHIalRvn~~~~Ae~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~cvELP~P~~-K~Yp~eGWEHIE~  120 (192)
T 1k4n_A           42 LTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGE-KRYPHEGWEHIEI  120 (192)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEECCCS-SCCSSCEEEEEEE
T ss_pred             ccCcEEEEecCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCeEEEEEEcCCCCC-CCCCCCCceEEEE
Confidence            45899999999999999999998864332 2222233333332       2455667777654442 2334578889999


Q ss_pred             EeC----CHHHHHHHHH------hCCCeEee
Q 042945           76 QCS----DMKLVMRKLE------EMNIEYET   96 (172)
Q Consensus        76 ~v~----dl~~~~~~l~------~~G~~i~~   96 (172)
                      .++    ++++..+++.      +.|+++..
T Consensus       121 Vlp~~~~t~~~~~~~l~~~~~~~~~gikvK~  151 (192)
T 1k4n_A          121 VLPGDPETLNARALALLSDEGLSLPGISVKT  151 (192)
T ss_dssp             ECCSCGGGHHHHHHHTSCHHHHHSTTCEEEE
T ss_pred             EecCCcCCHHHHHHHHhhcccccCCCcEEEe
Confidence            986    3445444433      24666653

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=91.74  E-value=1.4  Score=27.40  Aligned_cols=58  Identities=12%  Similarity=0.189  Sum_probs=41.6

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           69 KDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      ...|+++.|.|+++..+...+ .|.++........ .+...+++.-++|..+++.+....
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~   61 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKT-KGFNSYFLSFEDGARLEIMSRTDV   61 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGG-GTEEEEEEECSSSCEEEEEEETTC
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCC-CCccEEEEEcCCCcEEEEEecCCC
Confidence            457999999999999998865 5888765432211 123556777777999999987543

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=91.58  E-value=1.1  Score=29.55  Aligned_cols=59  Identities=12%  Similarity=0.169  Sum_probs=39.2

Q ss_pred             CCCcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecC-------------CeeEEEEEEECCCCCEEEEEeecC
Q 042945           67 NPKDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEG-------------GIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        67 ~~g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~-------------~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      ..+..|+++.|.|+++..+...+ .|.++........             ..+.+..++.. .+..+|+++...
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~~~   89 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEPDE   89 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEECS
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEECC
Confidence            45678999999999999999987 7887653221110             11234455543 477899998643

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=90.73  E-value=1.7  Score=27.92  Aligned_cols=58  Identities=10%  Similarity=0.135  Sum_probs=41.5

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCC-----CEEEEEeecC
Q 042945           68 PKDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDG-----YMIEICNCQN  126 (172)
Q Consensus        68 ~g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG-----~~iei~~~~~  126 (172)
                      .+..|+++.|.|+++..+...+ .|.++........ .+....++..+++     ..+++.+...
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~l~l~~~~~   71 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPE-QGVVEIMMAPAAKLTEHMTQVQVMAPLN   71 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETT-TTEEEEEEESSSSCCTTCCEEEEEEESS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCC-CCeEEEEEEcCCCCcCcceEEEEeecCC
Confidence            3568999999999999998875 7988765432221 1235577777775     7899998543

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=90.37  E-value=1.9  Score=26.87  Aligned_cols=56  Identities=14%  Similarity=0.161  Sum_probs=39.3

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           69 KDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +..|+++.|.|+++..+...+ .|.++........ .+....++.. ++..+++.+...
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~-~~~~~~l~~~~~   61 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPE-HGVSVVFVNL-GNTKMELLHPLG   61 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGG-GTEEEEEEEC-SSSEEEEEEECS
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCC-CCEEEEEEec-CCEEEEEEecCC
Confidence            467999999999999999988 7988775432211 1234455554 567889887543

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=90.05  E-value=1.5  Score=28.37  Aligned_cols=56  Identities=21%  Similarity=0.338  Sum_probs=40.2

Q ss_pred             CcceEEEEeCCHHHHHHHHHhCCCeEeeceeec----------CCeeEEEEEEECCCC-CEEEEEee
Q 042945           69 KDNHISFQCSDMKLVMRKLEEMNIEYETAVVDE----------GGIQVDQLFFHDPDG-YMIEICNC  124 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~----------~~~g~~~~~~~DPdG-~~iei~~~  124 (172)
                      +..|+++.|.|+++..+...+.|.++.......          ...+....++.-++| ..+++.+.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            567999999999999998888898876532211          111335677777776 78999875

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=89.76  E-value=2.4  Score=26.38  Aligned_cols=53  Identities=13%  Similarity=0.044  Sum_probs=38.3

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           69 KDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      +..|+++.|.|+++..+...+ .|.++........+ +.+.+++... +..+++..
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~-~~~l~l~~   58 (134)
T 3l7t_A            5 AVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKR-HDYKLDLKCG-DIELEIFG   58 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTT-TEEEEEEEET-TEEEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCC-cceEEEEecC-CeEEEEEe
Confidence            568999999999999999976 79988765433222 2344566654 44888987

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=89.34  E-value=2.3  Score=26.27  Aligned_cols=55  Identities=13%  Similarity=0.044  Sum_probs=38.0

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           69 KDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      +..|+++.|.|+++..+...+ .|.++........+ +.+.+++.-+++ .+++.+..
T Consensus         5 ~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~-~l~l~~~~   60 (126)
T 2p25_A            5 EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEK-NDIKLDLKLGSQ-ELEIFISD   60 (126)
T ss_dssp             CCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGG-TEEEEEEEETTE-EEEEEECT
T ss_pred             ccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCC-cceEEEEecCCe-EEEEEecc
Confidence            568999999999999999986 79887654322111 223455555556 88998753

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=88.99  E-value=0.69  Score=30.84  Aligned_cols=55  Identities=22%  Similarity=0.323  Sum_probs=37.8

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeee-c--CC-CcceEEE---EeCCeeEEEeecCCC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR-P--SF-NFEGAWL---FNHGIGIHLLESDKA   59 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~-~--~~-~~~~~~~---~~~~~~l~l~~~~~~   59 (172)
                      .++.|+.+.|.|++++.+..++ .|.++... +  .. +....++   .-.|..+++++....
T Consensus        78 ~g~~Hiaf~V~Did~~~~~l~~-~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           78 EGIHHIAIGVKSIEERIQEVKE-NGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             CCeEEEEEEECCHHHHHHHHHH-CCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCc
Confidence            4689999999999999999988 89887654 2  11 1122233   224677888886543

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=88.90  E-value=2.3  Score=27.52  Aligned_cols=59  Identities=17%  Similarity=0.171  Sum_probs=42.3

Q ss_pred             CCCcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecC------CeeEEEEEEECCCCCEEEEEeecC
Q 042945           67 NPKDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEG------GIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        67 ~~g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~------~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      ..+..|+++.|.|+++..+...+ .|.++........      ..+ ...++.-++|..+++.+...
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~l~~~~~   82 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASG-KVANFITPDGTILDLFGEPE   82 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTT-SEEEEECTTSCEEEEEECTT
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCC-cEEEEEeCCCCEEEEEecCC
Confidence            45778999999999999999987 6988775221100      011 33667777889999998654

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=88.11  E-value=1.5  Score=32.53  Aligned_cols=32  Identities=16%  Similarity=0.213  Sum_probs=29.3

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeee
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR   34 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~   34 (172)
                      ..+|.+|.+.+.|.+++.+.|+++||......
T Consensus       188 a~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          188 QFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             TEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             cceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            46899999999999999999999999998755

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=85.26  E-value=5  Score=25.06  Aligned_cols=56  Identities=9%  Similarity=0.057  Sum_probs=38.7

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCC---CCEEEEEeec
Q 042945           69 KDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPD---GYMIEICNCQ  125 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPd---G~~iei~~~~  125 (172)
                      +..|+++.|.|+++..+...+ .|.++........+ +...+++.-++   +..+++.+..
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~   61 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEY-KYSLAFVGYGPETEEAVIELTYNW   61 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTT-TEEEEEEESSCTTTSCEEEEEEET
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCC-ceEEEEEecCCCCCCcEEEEEEcC
Confidence            357999999999999999987 79887754322222 12345555444   7889998643

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=83.26  E-value=4  Score=25.85  Aligned_cols=55  Identities=13%  Similarity=0.134  Sum_probs=37.7

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           69 KDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +..|+++.|.|+++..+...+ .|.++...... ...+...+++.  ++..++|.+...
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~--~~~~l~l~~~~~   60 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRG-DTTSFAHGVLP--GGLSIVLREHDG   60 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC-SSEEEEEEECT--TSCEEEEEEETT
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccC-CCCceEEEEEc--CCCEEEEEeCCC
Confidence            457999999999999998876 69887654321 11112234444  788999998644

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=82.19  E-value=9.1  Score=25.67  Aligned_cols=58  Identities=9%  Similarity=-0.021  Sum_probs=41.1

Q ss_pred             CCCcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCC------------------CEEEEEeec
Q 042945           67 NPKDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDG------------------YMIEICNCQ  125 (172)
Q Consensus        67 ~~g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG------------------~~iei~~~~  125 (172)
                      .....|+++.|.|+++..+...+ .|.++........+ +...+++..+++                  ..+++....
T Consensus        32 ~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  108 (187)
T 3vw9_A           32 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIM-KFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNW  108 (187)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTT-TEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEET
T ss_pred             eeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCC-ceeEEEecCCCcccccccccchhhhcccCCceEEEEEec
Confidence            34568999999999999999954 69887764433222 235567776664                  789997643

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=81.74  E-value=8  Score=24.70  Aligned_cols=57  Identities=9%  Similarity=0.084  Sum_probs=39.3

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCC---CCEEEEEeecC
Q 042945           69 KDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPD---GYMIEICNCQN  126 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPd---G~~iei~~~~~  126 (172)
                      +..|+.+.|.|+++..+...+ .|.++........+ +....++.-++   +..+++.+...
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~l~~~~~   68 (144)
T 2c21_A            8 RMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPED-KYTLVFLGYGPEMSSTVLELTYNYG   68 (144)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGG-TEEEEEEESSCTTTSCEEEEEEETT
T ss_pred             eeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCC-CeEEEEEEcCCCCCceEEEEEecCC
Confidence            568999999999999999876 79887654321111 12335666554   58899987643

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=81.32  E-value=6.8  Score=24.30  Aligned_cols=30  Identities=13%  Similarity=0.124  Sum_probs=25.4

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeec
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP   35 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~   35 (172)
                      +..|+.+.|.|++++.+..++ .|.++...+
T Consensus        72 ~~~~~~f~v~d~~~~~~~l~~-~G~~~~~~~  101 (126)
T 2qqz_A           72 KRAHPAFYVLKIDEFKQELIK-QGIEVIDDH  101 (126)
T ss_dssp             SSSCEEEEETTHHHHHHHHHH-TTCCCEEEC
T ss_pred             CceEEEEEcCCHHHHHHHHHH-cCCCccCCC
Confidence            578999999999999999888 788776554

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=81.19  E-value=7  Score=23.65  Aligned_cols=51  Identities=16%  Similarity=0.335  Sum_probs=37.5

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           69 KDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      +..|+.+.|.|+++..+...+ .|.++....   .+   ...++..++|..+++.+..
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~---~~~~~~~~~~~~l~l~~~~   54 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GN---AFAVMRDNDGFILTLMKGK   54 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TT---TEEEEECTTCCEEEEEECS
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CC---cEEEEEcCCCcEEEEEeCC
Confidence            467999999999999998877 798876532   11   2256666678888888643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	172
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-16
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	3e-15
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	5e-14
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	8e-14
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	4e-13
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	5e-13
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	1e-12
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	4e-12
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	5e-12
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-11
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	3e-11
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-11
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	3e-11
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	1e-10
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	4e-10
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	8e-10
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	1e-09
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	3e-09
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	5e-09
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	1e-08
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	2e-08
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	4e-08
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	8e-08
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	4e-06
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	1e-05
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	5e-05
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	9e-04
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	0.002
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	0.002
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	0.003
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	0.003

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (172), Expect = 2e-16
 Identities = 31/159 (19%), Positives = 48/159 (30%), Gaps = 31/159 (19%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
                L       K  +KS+ FY +VLG  +I++  F      L+            +  
Sbjct: 19  TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKD 78

Query: 61  EKRGKINPKDN-----------------------------HISFQCSDMKLVMRKLEEMN 91
           EK      +                               HI     D+    ++ EE+ 
Sbjct: 79  EKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELG 138

Query: 92  IEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPVL 130
           +++     D         F  DPDGY IEI N   +  L
Sbjct: 139 VKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMATL 175

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 66.5 bits (161), Expect = 3e-15
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 7/125 (5%)

Query: 8   HVSFVSKSVEKSVMFYEQVLGFVMIKRPSF--NFEGAWLFNHGIGIHLLESDKAPEKRGK 65
            ++  +  +++ + FYE+ L    I   S    ++G          HL  +         
Sbjct: 12  RIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAP 71

Query: 66  INPKDNHISFQCSDMK---LVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC 122
           +   D+ + F   +      +  KL+ M  +   +           +   DPDG+ I   
Sbjct: 72  VPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSN--GGVTIEDPDGWRIVFM 129

Query: 123 NCQNL 127
           N + +
Sbjct: 130 NSKGI 134

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 63.8 bits (154), Expect = 5e-14
 Identities = 13/121 (10%), Positives = 32/121 (26%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
           M  +  +H       +  +   + +VLGF + ++              +     +     
Sbjct: 1   MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIH 60

Query: 61  EKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIE 120
                     +       D+      +   +   +      G      ++F DP G   E
Sbjct: 61  HPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNE 120

Query: 121 I 121
           +
Sbjct: 121 V 121

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 62.6 bits (151), Expect = 8e-14
 Identities = 17/123 (13%), Positives = 44/123 (35%), Gaps = 9/123 (7%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR----PSFNFEGAWLFNHGIGIHLLESDK 58
           I  L+H++F+ + +E+     E V     +              +     I + +++   
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQ--- 58

Query: 59  APEKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYM 118
             EK  + +          +D      ++ ++ ++         G     ++F+D D +M
Sbjct: 59  -GEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEG-RSIYFYDDDNHM 116

Query: 119 IEI 121
            E+
Sbjct: 117 FEL 119

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 60.7 bits (146), Expect = 4e-13
 Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 9/119 (7%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEK 62
           +  LNH++     +  S+ FY  +LGF +  R             G  + L  S +    
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQG----AYLELG-SLWLCLSREPQYG 56

Query: 63  RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
               +          +D      +L    +        EG    D  +F DPDG+ +E 
Sbjct: 57  GPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEG----DSFYFLDPDGHRLEA 111

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 60.8 bits (146), Expect = 5e-13
 Identities = 20/131 (15%), Positives = 46/131 (35%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGK 65
           + H       +++S+ FY + LG  ++++     +   L   G G  +  +         
Sbjct: 4   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 63

Query: 66  INPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ 125
           +    +  ++    + +   K    ++      +D         F  DPDGY IE+ N +
Sbjct: 64  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNEK 123

Query: 126 NLPVLPLSSCP 136
            +     +   
Sbjct: 124 TMMEKAEADMK 134

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 60.7 bits (146), Expect = 1e-12
 Identities = 19/130 (14%), Positives = 46/130 (35%), Gaps = 2/130 (1%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEK 62
           ++ L+H + V+  V +   + E  LGF + +    +    +         + ++      
Sbjct: 3   LVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN 61

Query: 63  RGKINPKDNHISFQCSDMKLVMR-KLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
             +++        + + +++  +     ++   E      G      L+  DPDG+ IEI
Sbjct: 62  GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEI 121

Query: 122 CNCQNLPVLP 131
                    P
Sbjct: 122 YTQDYYTGDP 131

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 58.5 bits (140), Expect = 4e-12
 Identities = 23/138 (16%), Positives = 37/138 (26%), Gaps = 11/138 (7%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGF------VMIKRPSFNFEGAWLFNHGIGIHLLES 56
           I   +H+S V+K+  ++  FY+ VLG       V    PS             G  L   
Sbjct: 4   IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFF 63

Query: 57  DKAPEKRGKINPKD-NHISFQCSDMKLVMRKLEEMNIE--YETAVVDEGGIQVDQLFFHD 113
           +     R          I         +    E         + +          L F D
Sbjct: 64  EIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRP--ALQFED 121

Query: 114 PDGYMIEICNCQNLPVLP 131
            +G  + +       V  
Sbjct: 122 AEGLRLVLLVSNGEKVEH 139

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 58.5 bits (140), Expect = 5e-12
 Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEK 62
           ++   HV      + K++  Y ++LG + + R         ++          S    E 
Sbjct: 5   VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG----RVYLKAWTEVDKFSLVLREA 60

Query: 63  RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
                            ++ + R L       E     E      ++ F  P G+  E+
Sbjct: 61  DEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFEL 119

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 57.3 bits (137), Expect = 1e-11
 Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 6/119 (5%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEK 62
           + SLNH++     ++KSV F+ ++LG  +  R +                  +  +    
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAY--LTCGDLWVCLSYDEARQYVP 59

Query: 63  RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
             + +      +    D + + ++LE+  +        EG       +F DPDG+ +E+
Sbjct: 60  PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEG----ASFYFLDPDGHKLEL 114

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 56.7 bits (136), Expect = 3e-11
 Identities = 12/123 (9%), Positives = 41/123 (33%), Gaps = 7/123 (5%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEK 62
           I  +  V    + ++K      ++ G+  + R                  ++        
Sbjct: 10  IQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQEA-IFQSIKGEAFGEIVVKYLDGPT 68

Query: 63  RGKINPKDNHISFQC---SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMI 119
                   +H++ +    +++     ++++      + ++D    +   L+F + +G + 
Sbjct: 69  EKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHS-SGIIDRFYFK--SLYFRESNGILF 125

Query: 120 EIC 122
           EI 
Sbjct: 126 EIA 128

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 55.8 bits (133), Expect = 3e-11
 Identities = 22/122 (18%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKR---PSFNFEGAWLFNHGIGIHLLESDKAPEK 62
           L H       +++S+ FY +VLG  +++    P + +  A++         +        
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 63  RGKINPKDNHISFQCSDMKL--VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIE 120
             K      +     S         K+ +             G      F  DPDGY IE
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122

Query: 121 IC 122
           + 
Sbjct: 123 LI 124

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 56.2 bits (134), Expect = 3e-11
 Identities = 18/122 (14%), Positives = 33/122 (27%), Gaps = 5/122 (4%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAP 60
             I+   ++  V   + KS  FY  VLG  + +          L        +L      
Sbjct: 12  PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPIA 71

Query: 61  EKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIE 120
                      +     +++       +E+    E           D +   DP G+  E
Sbjct: 72  A-----VAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYE 126

Query: 121 IC 122
             
Sbjct: 127 FF 128

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 55.0 bits (131), Expect = 1e-10
 Identities = 23/137 (16%), Positives = 49/137 (35%), Gaps = 17/137 (12%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEG---------AWLFNHGIGIHL 53
            + ++HV++     +++  +Y++  G+  + R     +G         A L  H   + +
Sbjct: 5   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 64

Query: 54  LESDKAPEKRGKINPKDN------HISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVD 107
           +          K   K N      H++++  D+  V   L E  ++        G     
Sbjct: 65  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 124

Query: 108 QLFFH--DPDGYMIEIC 122
             F H     G +IE+ 
Sbjct: 125 INFMHPKSGKGVLIELT 141

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 53.1 bits (126), Expect = 4e-10
 Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 23/141 (16%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAW----------------LFN 46
           +L +++VS V +S++ ++ F+E+ +G  +  R +   E A                   +
Sbjct: 7   LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD 65

Query: 47  HGIGIHLLESDKAPEKRGKINPKDNH-----ISFQCSDMKLVMRKLEEMNIEYETAVVDE 101
               I L      P          N      + F   D+  ++ +L +   E    VV  
Sbjct: 66  GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQY 125

Query: 102 GGIQVDQLFFHDPDGYMIEIC 122
                   +    +G +I + 
Sbjct: 126 ENS-YRLCYIRGVEGILIGLA 145

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 51.5 bits (122), Expect = 8e-10
 Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 8/114 (7%)

Query: 8   HVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKIN 67
             +  +    ++  FY  +LG  +     +        +       +    +  + G   
Sbjct: 5   VANIATPEPARAQAFYGDILGMPVAMDHGWI---VTHASPLEAHAQV----SFAREGGSG 57

Query: 68  PKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
                +S +  +   V  ++ +  +  E   V E      +LF  DP G +I I
Sbjct: 58  TDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQ-RLFLRDPFGKLINI 110

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 51.0 bits (121), Expect = 1e-09
 Identities = 16/118 (13%), Positives = 36/118 (30%), Gaps = 7/118 (5%)

Query: 4   LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKR 63
           ++LN +  +  +V +     E +L              A        + L ++   P + 
Sbjct: 1   MNLNQLDIIVSNVPQVCADLEHILDKKADYAND---GFAQFTIGSHCLMLSQNHLVPLEN 57

Query: 64  GKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
                    I  +  D+    ++L E+ I+               L    P G +++ 
Sbjct: 58  F---QSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTE-SLLVQGPAGLVLDF 111

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 50.7 bits (120), Expect = 3e-09
 Identities = 21/124 (16%), Positives = 35/124 (28%), Gaps = 15/124 (12%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEK 62
           I SL ++ F    V     F  Q LG +          G           +         
Sbjct: 2   IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN---GDLFRIDSRAWRIAVQQGE--- 55

Query: 63  RGKINPKDNHISFQCSDMKLVMR---KLEEMNIEYETAVVDEGGIQVDQ--LFFHDPDGY 117
                       ++ +D   + +   KL++  I   T        +     + F DP G 
Sbjct: 56  ----VDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGL 111

Query: 118 MIEI 121
            +EI
Sbjct: 112 PLEI 115

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 50.0 bits (118), Expect = 5e-09
 Identities = 16/124 (12%), Positives = 33/124 (26%), Gaps = 15/124 (12%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEK 62
           I  L ++ F  K V     F  + +G +                         + +  E 
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAGD-----AALYRADQRAWRIAVQPGE- 55

Query: 63  RGKINPKDNHISFQCSDMKLVMRKLEEM---NIEYETAVVDEGGI--QVDQLFFHDPDGY 117
                    +   +  D   + R  +++    + +             +  L   DP G 
Sbjct: 56  ----LDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGL 111

Query: 118 MIEI 121
            +EI
Sbjct: 112 PLEI 115

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 48.4 bits (114), Expect = 1e-08
 Identities = 16/108 (14%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 14  KSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHI 73
           + V ++V F+   LGF  +     +F G    +  + I  ++    P+            
Sbjct: 13  RDVAEAVEFWTDRLGFSRVFVED-DFAGVVRDDVTLFISAVQDQVVPDNTQAWVWVRGLD 71

Query: 74  SFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
                  ++V     + +    T +V++   +  +    DP G  +  
Sbjct: 72  ELYAEWSEVVSTNFRDASGPAMTEIVEQPWGR--EFALRDPAGNCVHF 117

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 47.8 bits (112), Expect = 2e-08
 Identities = 16/118 (13%), Positives = 32/118 (27%), Gaps = 8/118 (6%)

Query: 4   LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKR 63
           + + H++     V  +  F E+  G          F      +  I        K  E +
Sbjct: 2   MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTL----MKGKEVQ 57

Query: 64  GKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEI 121
                           +  + ++L+E     E              +   P G+ IE+
Sbjct: 58  YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHA----YTFYVEAPGGFTIEV 111

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 47.4 bits (111), Expect = 4e-08
 Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 11/130 (8%)

Query: 6   LNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGK 65
           ++  + V + + KS+ FY + +G  +            + + GI +     +       +
Sbjct: 3   ISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 66  INPKDN----HISFQCSDMKLVMRKLE---EMNIEYETAVVDEGGIQVDQLFFHDPDGYM 118
                      I+F+  D   V +K     +   E      +    Q       DPDG +
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQR-YAIVKDPDGNV 120

Query: 119 IEICNCQNLP 128
           +++     LP
Sbjct: 121 VDL--FAPLP 128

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 47.1 bits (111), Expect = 8e-08
 Identities = 18/129 (13%), Positives = 36/129 (27%), Gaps = 15/129 (11%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGF-----VMIKRPSFNFEGAWLFNHGIGIHLLESD 57
              + H         K++ FY +VLGF     + I+        A   +     H +   
Sbjct: 8   DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALA 67

Query: 58  KAPEKRGKINPKDNHISFQCSDMKLVMR---KLEEMNIEYETAVVDEGGIQVDQLFFHDP 114
             P  +       +H   Q + +  V     +L+                 +   +   P
Sbjct: 68  AFPIPKR-----IHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTL-SFYADTP 121

Query: 115 DGYM-IEIC 122
              + +E  
Sbjct: 122 SPMIEVEFG 130

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 42.5 bits (99), Expect = 4e-06
 Identities = 19/150 (12%), Positives = 40/150 (26%), Gaps = 21/150 (14%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAW-----LFNHGIGIHLLE 55
            P+  ++ V F   + +++  +Y    G  ++                L N      L  
Sbjct: 3   FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTS 62

Query: 56  SDKAPEKRGKINPKD--------NHISFQCSDMKLVMRKLEE---MNIEYETAVVDEGGI 104
             K     G                ++ +  D +       E    ++     + DE G 
Sbjct: 63  VIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHG- 121

Query: 105 QVDQLFFHDPDG---YMIEICNCQNLPVLP 131
            V              +++     + P LP
Sbjct: 122 TVVLAAIATYGKTRHTLVDRTG-YDGPYLP 150

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 40.5 bits (93), Expect = 1e-05
 Identities = 14/115 (12%), Positives = 30/115 (26%), Gaps = 3/115 (2%)

Query: 11  FVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKD 70
             +  V  +V F+   LGF                +  + I   E     +         
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDFAG-VRRGDIRLHISRTEHQIVADNTSAWIEVT 69

Query: 71  NHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ 125
           +  +      + V     + +    T V +    +  +    DP G  +     +
Sbjct: 70  DPDALHEEWARAVSTDYADTSGPAMTPVGESPAGR--EFAVRDPAGNCVHFTAGE 122

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 38.8 bits (89), Expect = 5e-05
 Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 5/111 (4%)

Query: 13  SKSVEKSVMFYEQVLGF-VMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDN 71
           S+  + +  FYE+ LGF ++ +   +              H      A      +   D 
Sbjct: 10  SRDFDSTAAFYER-LGFGIVFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLRLDDL 68

Query: 72  HISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC 122
              ++      +          +   +   GG         DPDG ++ + 
Sbjct: 69  AEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMA---ALVDPDGTLLRLI 116

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 36.2 bits (83), Expect = 9e-04
 Identities = 12/111 (10%), Positives = 34/111 (30%), Gaps = 18/111 (16%)

Query: 1   MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEG----------AWLFNHGIG 50
             +   +H+      +  +  ++    GF      +    G              +  + 
Sbjct: 5   YGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVL 64

Query: 51  IHLLESDKAPEKRGKIN--------PKDNHISFQCSDMKLVMRKLEEMNIE 93
           + L E     ++R +I         P   H++    D+   +R+++  +  
Sbjct: 65  LPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAM 115

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 34.8 bits (79), Expect = 0.002
 Identities = 6/50 (12%), Positives = 15/50 (30%)

Query: 1  MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG 50
             L+ +HV         +   +   LG  +  R   +   +   +  + 
Sbjct: 9  FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLR 58

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.8 bits (79), Expect = 0.002
 Identities = 4/49 (8%), Positives = 13/49 (26%)

Query: 1  MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGI 49
            +   +H+ F           +   LG     +   +       ++ +
Sbjct: 8  FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLL 56

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 34.5 bits (79), Expect = 0.003
 Identities = 13/93 (13%), Positives = 32/93 (34%), Gaps = 13/93 (13%)

Query: 15  SVEKSVMFYEQVLGF-----VMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKI--- 66
            +     FYE++  F       IK          +      I +  ++++ +  G+I   
Sbjct: 17  RMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEF 76

Query: 67  -----NPKDNHISFQCSDMKLVMRKLEEMNIEY 94
                     H++F   D+      L+++ + +
Sbjct: 77  LMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRF 109

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (77), Expect = 0.003
 Identities = 20/136 (14%), Positives = 44/136 (32%), Gaps = 12/136 (8%)

Query: 3   ILSLNHVSFVSKSVEKSVMFYEQVLGF-----VMIKRPSFNFEGAWLFNHGIGIHLLESD 57
            L  + V+F   + +++  FY   +GF       ++  S       +    I   L  + 
Sbjct: 9   FLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSAL 68

Query: 58  KAPEKRGKINPKDN-----HISFQCSDMKLVMRKLEEMNIE--YETAVVDEGGIQVDQLF 110
               K    +   +      I+F+  D + +++K  E   +   E  V ++   +V    
Sbjct: 69  NPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAV 128

Query: 111 FHDPDGYMIEICNCQN 126
                     +    N
Sbjct: 129 LQTYGDTTHTLVEKIN 144

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	172
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.9
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.87
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.87
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.87
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.87
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.86
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.86
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.85
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.85
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.84
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.84
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.84
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.83
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.83
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.82
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.82
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.81
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.81
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.81
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.8
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.78
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.77
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.76
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.75
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.75
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.74
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.74
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.71
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.66
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.65
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.55
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.3
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.21
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.2
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.19
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.15
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.94
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.86
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.63
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.71
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	92.87
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	92.43
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	90.67
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	90.64
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	89.83
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	89.28
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	88.46
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	88.45
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	86.58
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	85.8
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	84.92
d2f06a1	71	Hypothetical protein BT0572 {Bacteroides thetaiota	81.52
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	81.14

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.90  E-value=5e-23  Score=135.01  Aligned_cols=114  Identities=14%  Similarity=0.154  Sum_probs=91.0

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHHH
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLV   83 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~   83 (172)
                      ++|+|+.|.|+|+++|++||+++||++.....+   .-..+..++..+.+......+   ....+...+++|.|+|++++
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~---~~~~~~~g~~~l~l~~~~~~~---~~~~~~~~~~~f~v~D~d~~   74 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND---GFAQFTIGSHCLMLSQNHLVP---LENFQSGIIIHIEVEDVDQN   74 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET---TEEEEEETTEEEEEESSCSSS---CCCCCSCEEEEEECSCHHHH
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC---CeEEEEEcCceeeeeecccCC---CCCCCcceEEEEEECCHHHH
Confidence            478999999999999999999999999876532   234556667777776543222   22234457899999999999


Q ss_pred             HHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           84 MRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        84 ~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +++|+++|+++..+|...+ ||.+.+|++|||||+|||.+.
T Consensus        75 ~~~l~~~G~~i~~~~~~~~-~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          75 YKRLNELGIKVLHGPTVTD-WGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             HHHHHHHTCCEEEEEEECT-TSCEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHhhccccccceEEee-CCeEEEEEECCCCCEEEEEEe
Confidence            9999999999999887644 566899999999999999974

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.87  E-value=7.8e-22  Score=137.78  Aligned_cols=119  Identities=13%  Similarity=0.239  Sum_probs=85.3

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCee---EEEeecCCCCcccCCCCCCcceEEEEeC
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG---IHLLESDKAPEKRGKINPKDNHISFQCS   78 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~---l~l~~~~~~~~~~~~~~~g~~~v~~~v~   78 (172)
                      +|++|+||+|.|+|++++.+||+++||+++..+.  +....+....+..   +.+.......  .....++..||+|.|+
T Consensus         9 ~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~HiAf~V~   84 (170)
T d1zswa2           9 QIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRN--DQEAIFQSIKGEAFGEIVVKYLDGPT--EKPGRGSIHHLAIRVK   84 (170)
T ss_dssp             SCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC--SSEEEEESSTTCSTTCEEEEECCSSB--CBCCBTCEEEEEEEES
T ss_pred             HhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeec--CceEEEEeccCccceEEEeccccccc--cccCccccceEEEEeC
Confidence            5789999999999999999999999999998874  2223333322221   2222222111  1222345789999997


Q ss_pred             C---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           79 D---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        79 d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      |   ++++++++.+.|+++.. +.....  .+++||+|||||+|||++..+.
T Consensus        85 ~~~~l~~~~~~l~~~G~~~~~-~~~~~~--~~s~Yf~DPdG~~iEl~t~~pg  133 (170)
T d1zswa2          85 NDAELAYWEEQVKQRGFHSSG-IIDRFY--FKSLYFRESNGILFEIATDGPG  133 (170)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCC-CEECSS--EEEEEEECTTCCEEEEEEEEEC
T ss_pred             ChHHHHHHHHHHHhcCCCccc-cccCCC--EEEEEEECCCCcEEEEEECCCC
Confidence            5   78899999999999754 444432  4889999999999999997654

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.87  E-value=3.1e-21  Score=130.77  Aligned_cols=124  Identities=17%  Similarity=0.283  Sum_probs=85.8

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC-CCcceEE-E-EeC-----CeeEEEeecCCCCcccCCCCCCcceE
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEGAW-L-FNH-----GIGIHLLESDKAPEKRGKINPKDNHI   73 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-~~~~~~~-~-~~~-----~~~l~l~~~~~~~~~~~~~~~g~~~v   73 (172)
                      .|++|+||+|.|+|+++|++||+++||+++..+.. .+..... + ...     +..+.+....... ......++..|+
T Consensus         3 ~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~Hi   81 (144)
T d1zswa1           3 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVG-RTYRGTNAITRI   81 (144)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCC-BCBCCBSEEEEE
T ss_pred             cccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeeccccccc-CCccCCCceeEE
Confidence            68999999999999999999999999999987642 1111111 1 111     1223333322221 112223356899


Q ss_pred             EEEeCC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCCCC
Q 042945           74 SFQCSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPV  129 (172)
Q Consensus        74 ~~~v~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~~  129 (172)
                      +|.|+|   ++++.++|++.|+.+..+. ...  +.+++||+|||||.|||++..+.+.
T Consensus        82 af~v~~~~~l~~~~~~l~~~gv~~~~~~-~~~--~~~~~yf~DPdG~~iEl~~~~~~~~  137 (144)
T d1zswa1          82 GLLVPSEDSLHYWKERFEKFDVKHSEMT-TYA--NRPALQFEDAEGLRLVLLVSNGEKV  137 (144)
T ss_dssp             EEEESCHHHHHHHHHHHHHTTCEECCSE-EET--TEEEEEEECTTCCEEEEEECTTCCC
T ss_pred             EEecCCchhHHHHhhhhhccceeeeCcc-ccC--CeEEEEEECCCCCEEEEEEeCCCCC
Confidence            999987   7788899999999876543 333  3578999999999999998766443

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.87  E-value=6.5e-22  Score=137.08  Aligned_cols=120  Identities=13%  Similarity=0.192  Sum_probs=86.2

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC-cce--EEEEeCCeeE-EEeecCCCCcccCCCCCCcceEEEE
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN-FEG--AWLFNHGIGI-HLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~~~--~~~~~~~~~l-~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      |..++++||.|.|+|+++|++||+++|||++..+.... ...  .+........ ......       ...++..|++|.
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~h~~~~   73 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH-------PEKGRLHHVSFH   73 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEEC-------SSSSEEEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccccccccccc-------CCCCccceeEEE
Confidence            78899999999999999999999999999988653211 111  2222222111 111111       123457899999


Q ss_pred             eCCHH---HHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           77 CSDMK---LVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        77 v~dl~---~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      +.+++   +++++|++.|+++..++......+.+++|++|||||.|||+...+.
T Consensus        74 ~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~~  127 (162)
T d1mpya2          74 LETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDY  127 (162)
T ss_dssp             CSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCB
T ss_pred             EeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCcc
Confidence            98655   7789999999999887766543345889999999999999986664

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.87  E-value=3.1e-21  Score=128.55  Aligned_cols=116  Identities=16%  Similarity=0.279  Sum_probs=85.8

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC----CCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS----FNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      ++.+|+||.|.|+|++++++||+++||+++..+.+    ......++...+..+++.......      ..+..|++|.+
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~f~v   74 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA------ERSYNHIAFKI   74 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCS------SCCSCEEEEEC
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeeccccccc------ccceeeeeecc
Confidence            36789999999999999999999999999987642    122334455556666665543222      33567899977


Q ss_pred             C--CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           78 S--DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        78 ~--dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +  |+++++++|+++|+++..++.... ++.+++|++|||||+|||.+.
T Consensus        75 ~~~dv~~~~~~l~~~gv~i~~~~~~~~-~~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          75 DDADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             CGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             cHHHHHHHHHHHHHCCCeEecCCcccC-CCEEEEEEECCCCCEEEEEEC
Confidence            5  899999999999999877653332 345789999999999999863

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.86  E-value=4.6e-21  Score=130.23  Aligned_cols=121  Identities=17%  Similarity=0.261  Sum_probs=87.0

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC--------------cceEEEEeC--CeeEEEeecCCC---C--
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN--------------FEGAWLFNH--GIGIHLLESDKA---P--   60 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~--------------~~~~~~~~~--~~~l~l~~~~~~---~--   60 (172)
                      ++++|+||+|.|+|+++|.+||++ ||+++..+.+..              ....++...  ...+++++....   .  
T Consensus         6 ~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~   84 (149)
T d1ss4a_           6 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADH   84 (149)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBC
T ss_pred             CCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccc
Confidence            468999999999999999999999 999988653110              011222222  234555542211   1  


Q ss_pred             cccCCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           61 EKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        61 ~~~~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      ........|..|++|.|+|+++++++|+++|+++..+|....+ +.+.+|++||||++|||+|.
T Consensus        85 ~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          85 RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             cccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence            1111224466899999999999999999999999887765443 45789999999999999984

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.1e-20  Score=125.78  Aligned_cols=121  Identities=20%  Similarity=0.300  Sum_probs=84.8

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC-CCcceEEEE-eCC-----eeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FNFEGAWLF-NHG-----IGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-~~~~~~~~~-~~~-----~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      |+|.|+.|.|+|+++|++||+++|||++....+ ......+.. ...     .........  .........+..|+++.
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~   78 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW--GVDKYELGTAYGHIALS   78 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEET--TCCCCCCCSSEEEEEEE
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeecccccccccc--ccccccccccceeeccc
Confidence            578999999999999999999999999886531 111111111 111     111111111  11112234566899999


Q ss_pred             eCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           77 CSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        77 v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +++++.+.+++++.|..+..++......+.+.+|++|||||.|||++..+
T Consensus        79 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~  128 (135)
T d1f9za_          79 VDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             CSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             hHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCC
Confidence            99999999999999999988876655555688999999999999998655

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.85  E-value=8.3e-21  Score=126.24  Aligned_cols=119  Identities=16%  Similarity=0.215  Sum_probs=83.6

Q ss_pred             eeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecC----CCCcccCCCCCCcceEEEEeCC-
Q 042945            5 SLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESD----KAPEKRGKINPKDNHISFQCSD-   79 (172)
Q Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~----~~~~~~~~~~~g~~~v~~~v~d-   79 (172)
                      +|+||+|.|+|+++|++||++ ||+.+...........+...++..+.+....    ..+.......++..|++|.|++ 
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~   80 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFEFPDT   80 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCSEEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEECSSH
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCccccccccccceeeeccceeeeeecccccccccCCCCCCCccccceeEeeeeccc
Confidence            799999999999999999987 8998765432222122222233334333211    1111122233456799999986 


Q ss_pred             --HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           80 --MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        80 --l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                        +++++++|+++|+++..+|.... +|.+.+|++|||||+|||++..
T Consensus        81 ~~l~~~~~~l~~~G~~~~~~p~~~~-~G~~~~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          81 ASVDKKYAELVDAGYEGHLKPWNAV-WGQRYAIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEECT-TSEEEEEEECTTSCEEEEEEEC
T ss_pred             hhhHHHHHHHHhccCccccCCeEcC-CCcEEEEEECCCCCEEEEEecC
Confidence              77789999999999998886644 5678999999999999999753

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.85  E-value=4.1e-21  Score=129.76  Aligned_cols=123  Identities=13%  Similarity=0.268  Sum_probs=88.3

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC---CCcceEEEE------eCCeeEEEeecCCCCcc------cCCCC
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS---FNFEGAWLF------NHGIGIHLLESDKAPEK------RGKIN   67 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~------~~~~~l~l~~~~~~~~~------~~~~~   67 (172)
                      +++|+||+|.|+|+++|.+||+++||++......   ......+..      .++..+++++.......      .....
T Consensus         5 ~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~   84 (145)
T d1jc4a_           5 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGR   84 (145)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTC
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCC
Confidence            6899999999999999999999999999876532   111111221      23456777775433221      12235


Q ss_pred             CCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEE--ECCCCCEEEEEeec
Q 042945           68 PKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFF--HDPDGYMIEICNCQ  125 (172)
Q Consensus        68 ~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~--~DPdG~~iei~~~~  125 (172)
                      .|..|+||.|+|+++++++|+++|+++..++......|.+.+|+  +||+|++|||+|+.
T Consensus        85 ~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          85 AGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            67899999999999999999999999875442322224455555  69999999999974

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.84  E-value=2.9e-20  Score=120.71  Aligned_cols=107  Identities=18%  Similarity=0.325  Sum_probs=79.4

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeC-CeeEEEeecCCCCcccCCCCCCcceEEEEeCC---
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNH-GIGIHLLESDKAPEKRGKINPKDNHISFQCSD---   79 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~d---   79 (172)
                      ++|+||.|.|+|++++++||+++||+++..+..  ....+.... +..+.+......      ..++..|++|.|+|   
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~~~~h~~f~v~~~~~   73 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG--NAFAVMRDNDGFILTLMKGKEV------QYPKTFHVGFPQESEEQ   73 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET--TTEEEEECTTCCEEEEEECSSC------CCCTTCCEEEECSSHHH
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec--Ccceeeeecceeeeeeeeeecc------cccccceeeeeeccccc
Confidence            689999999999999999999999999987642  222332222 344555443221      23466899999986   


Q ss_pred             HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEE
Q 042945           80 MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC  122 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~  122 (172)
                      ++++++++.++|+++..++..    +.+++|++|||||.|||+
T Consensus        74 v~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          74 VDKINQRLKEDGFLVEPPKHA----HAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHHHHTTCCCCCCEEC-----CEEEEEEETTTEEEEEE
T ss_pred             hhhhhhhHHHcCCccccCCCC----ceEEEEEECCCCCEEEEE
Confidence            778999999999998765432    236799999999999985

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.84  E-value=5.8e-20  Score=123.87  Aligned_cols=115  Identities=23%  Similarity=0.346  Sum_probs=85.8

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEe--CC
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQC--SD   79 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v--~d   79 (172)
                      ++++|+||+|.|+|++++++||+++||+++..+.   ....++..++..+.+........ ......+..|++|.+  +|
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~h~~~~~~~~d   76 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARW---NTGAYLTCGDLWVCLSYDEARQY-VPPQESDYTHYAFTVAEED   76 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEE---TTEEEEEETTEEEEEEECTTCCC-CCGGGSCSCEEEEECCHHH
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEe---ccccccccccccceeeccccccc-CCCcCCccceeeeechHHH
Confidence            4689999999999999999999999999998763   23344445555555544332221 122234567888887  58


Q ss_pred             HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           80 MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +++++++|+++|+++...+.    ++.+++||+|||||.|||.+.
T Consensus        77 ~~~~~~~l~~~Gv~~~~~~~----~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          77 FEPLSQRLEQAGVTIWKQNK----SEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             HHHHHHHHHHTTCCEEECCC----SSSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHHCCCeEeecCC----CCceEEEEECCCCCEEEEEEC
Confidence            99999999999999876542    234789999999999999864

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.84  E-value=2.7e-20  Score=120.31  Aligned_cols=110  Identities=15%  Similarity=0.200  Sum_probs=81.0

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHHH
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLV   83 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~   83 (172)
                      ++| +.+|.|+|+++|++||+++||++.....+  . ...+...+....++......    ...++..|++|.++|++++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~dvd~~   73 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHG--W-IVTHASPLEAHAQVSFAREG----GSGTDVPDLSIEVDNFDEV   73 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS--S-EEEEEEEEEEEEEEEEESSS----BTTBCCCSEEEEESCHHHH
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc--c-eeEeccccccceeeeccccc----CCCCceeEEEEEecCHHHH
Confidence            566 58899999999999999999999987642  1 22222222222222222111    1133557899999999999


Q ss_pred             HHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEE
Q 042945           84 MRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEIC  122 (172)
Q Consensus        84 ~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~  122 (172)
                      +++++++|+++..+|.... ||.+.+|++|||||+|||+
T Consensus        74 ~~~l~~~g~~~~~~p~~~~-~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          74 HARILKAGLPIEYGPVTEA-WGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHHHTTCCCSEEEEECT-TSCEEEEEECTTSCEEEEE
T ss_pred             HHHHHhhccccccCCeEcC-CCcEEEEEECCCCCEEEeC
Confidence            9999999999988887654 4678999999999999985

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.83  E-value=1.6e-20  Score=126.40  Aligned_cols=121  Identities=16%  Similarity=0.222  Sum_probs=84.2

Q ss_pred             CcceeceEEEEe----CCHHHHHHHHHHhhCCEEeeec--CCCcceEEEEeCCeeEE--EeecCCCCcccCCCCCCcceE
Q 042945            2 PILSLNHVSFVS----KSVEKSVMFYEQVLGFVMIKRP--SFNFEGAWLFNHGIGIH--LLESDKAPEKRGKINPKDNHI   73 (172)
Q Consensus         2 ~~~~i~hv~l~v----~D~~~a~~FY~~~LG~~~~~~~--~~~~~~~~~~~~~~~l~--l~~~~~~~~~~~~~~~g~~~v   73 (172)
                      ++.+|.|+.++|    +|+++|++||+++|||++..+.  .......++...+..++  +.......  ......+..|+
T Consensus         2 ~~~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~hl   79 (137)
T d1twua_           2 RFSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGS--TAPVPHPDSLL   79 (137)
T ss_dssp             BCSSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEETTCC--CCCCCCTTCEE
T ss_pred             ccCCCceEEEEEecccCCHHHHHHHHHhccCCceeeeeccccceeEEEecCCCCceeeecccccccc--cccccccCceE
Confidence            356777777776    7999999999999999997653  12233444444444333  33332222  22223456799


Q ss_pred             EEEeCC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           74 SFQCSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        74 ~~~v~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +|.|++   +++++++|+++|+++..++..  .|+.+.+||+|||||.|||+....
T Consensus        80 af~v~~~~dv~~~~~~l~~~G~~~~~~~~~--~~~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          80 VFYVPNAVELAAITSKLKHMGYQEVESENP--YWSNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             EEECCCHHHHHHHHHHHHHTTCCEECCSSH--HHHSSEEEEECTTCCEEEEESSCC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCeEeCCCCC--CCCceEEEEECCCCCEEEEEcCCC
Confidence            999875   888899999999998865532  345577999999999999997543

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.83  E-value=1.2e-19  Score=121.46  Aligned_cols=112  Identities=22%  Similarity=0.336  Sum_probs=82.6

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEe--CC
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQC--SD   79 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v--~d   79 (172)
                      ++.+|+||.|.|+|++++++||+++||+++..+.+   ...++..++..++.........    ...+..|++|.+  +|
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~h~~~~~~~~d   73 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD---QGAYLELGSLWLCLSREPQYGG----PAADYTHYAFGIAAAD   73 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---TEEEEEETTEEEEEEECTTCCC----CCSSSCEEEEEECHHH
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc---ceeeeecCCeEEEEeeeccccc----cccccccchhccccch
Confidence            46899999999999999999999999999987642   3445555666555544332221    122345666555  69


Q ss_pred             HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           80 MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        80 l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +++++++|+++|+++...+  ..  +.+.+||+|||||.|||.+.
T Consensus        74 l~~~~~~l~~~G~~~~~~~--~~--~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          74 FARFAAQLRAHGVREWKQN--RS--EGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             HHHHHHHHHHTTCCEEECC--CS--SSCEEEEECTTCCEEEEESC
T ss_pred             HHHHHHHHHHCCCcCccCC--Cc--ceeEEEEECCCCCEEEEEEC
Confidence            9999999999999986643  22  23679999999999999863

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.82  E-value=2e-20  Score=126.80  Aligned_cols=115  Identities=17%  Similarity=0.251  Sum_probs=79.9

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCe-e--EEEeecCCCCcccCCCCCCcceEEEEe--
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGI-G--IHLLESDKAPEKRGKINPKDNHISFQC--   77 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-~--l~l~~~~~~~~~~~~~~~g~~~v~~~v--   77 (172)
                      +++|+||.|.|+|++++.+||+++||+.+..+...  ...+...... .  ...+...        ..++..|+++.+  
T Consensus         5 i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~   74 (145)
T d1mpya1           5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--GRVYLKAWTEVDKFSLVLREA--------DEPGMDFMGFKVVD   74 (145)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--SCEEEECTTCCBSCSEEEEEC--------SSCEEEEEEEEESC
T ss_pred             CcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeecc--Cccceecccccceeecccccc--------Ccccceeeeeeehh
Confidence            68999999999999999999999999999876422  1222222111 1  1111111        122345666655  


Q ss_pred             -CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           78 -SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        78 -~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                       +|+++++++|+++|+++...+........+++||+|||||.|||++..+.
T Consensus        75 ~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e~  125 (145)
T d1mpya1          75 EDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEY  125 (145)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCB
T ss_pred             HHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEeccc
Confidence             58999999999999998776644332223789999999999999986554

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.82  E-value=3.9e-20  Score=123.69  Aligned_cols=113  Identities=19%  Similarity=0.205  Sum_probs=84.0

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCe--eEEEeecCCCCcccCCCCCCcceEEEEeC-
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGI--GIHLLESDKAPEKRGKINPKDNHISFQCS-   78 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~--~l~l~~~~~~~~~~~~~~~g~~~v~~~v~-   78 (172)
                      .|++|+||.|.|+|++++++||+++|||++..+.+   ...++..++.  .+.+....         .++..|++|.|. 
T Consensus         1 ~I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~---~~~~l~~~~~~~~l~l~~~~---------~~~~~h~~f~v~~   68 (131)
T d1lgta1           1 SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD---NGDLFRIDSRAWRIAVQQGE---------VDDLAFAGYEVAD   68 (131)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEESS
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHhhCCceeecCC---cceEEeecCCceEEEEecCC---------CCCceEEEEEEcc
Confidence            47899999999999999999999999999987642   3445543332  23333221         336789999995 


Q ss_pred             --CHHHHHHHHHhCCCeEeeceeecC--CeeEEEEEEECCCCCEEEEEeecC
Q 042945           79 --DMKLVMRKLEEMNIEYETAVVDEG--GIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        79 --dl~~~~~~l~~~G~~i~~~~~~~~--~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                        +++++.++|+++|+++...+....  ..+.+.+|++|||||.||++....
T Consensus        69 ~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~~  120 (131)
T d1lgta1          69 AAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS  120 (131)
T ss_dssp             HHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCCC
Confidence              678899999999999887663321  113477999999999999986433

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.81  E-value=6.9e-20  Score=124.59  Aligned_cols=114  Identities=16%  Similarity=0.134  Sum_probs=84.2

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCee----EEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG----IHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~----l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      ++++|+||.|.|+|++++++||+++|||+...+..   ...++...+..    +.+...         ..++..|++|.+
T Consensus        13 ~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---------~~~~~~h~~~~~   80 (146)
T d1f1ua1          13 DIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE---NTIYLRSLEEFIHHNLVLRQG---------PIAAVAAFAYRV   80 (146)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---SEEEEECTTCCSSCSEEEEEC---------SSCEEEEEEEEE
T ss_pred             CCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC---Cceeeecccccccceeecccc---------CCCCCceeeEee
Confidence            47899999999999999999999999999987632   22333222211    111111         134678999999


Q ss_pred             C---CHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           78 S---DMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        78 ~---dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      .   |++++.++|+++|+++...+......+.+++||+|||||.|||+...+.
T Consensus        81 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e~  133 (146)
T d1f1ua1          81 KSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEH  133 (146)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCC
T ss_pred             ccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEeccc
Confidence            6   7899999999999998876654433234789999999999999985443

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.81  E-value=2.1e-19  Score=125.96  Aligned_cols=143  Identities=19%  Similarity=0.246  Sum_probs=90.3

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC-c--ceEEEEeCCee--EEEeecCCCCcccCCCCCCcceEEEE
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN-F--EGAWLFNHGIG--IHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~--~~~~~~~~~~~--l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      .+++|+||+|.|+|++++++|| ++|||++..+.... .  ...+.......  +.+...         ..++..|++|.
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------~~~~~~H~~f~   71 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGG---------NGPRMHHVAFA   71 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEES---------SBSEEEEEEEE
T ss_pred             ceeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceecccc---------cCCCccceeEE
Confidence            3689999999999999999999 67999987653111 1  12222222222  222211         13467899999


Q ss_pred             eCC---HHHHHHHHHhCCCe--EeeceeecCCeeEEEEEEECCCCCEEEEEeecCCCC---CCCCCCCCCCccccccccc
Q 042945           77 CSD---MKLVMRKLEEMNIE--YETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNLPV---LPLSSCPLKLPSKRSSEKA  148 (172)
Q Consensus        77 v~d---l~~~~~~l~~~G~~--i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~~~---~~~~~~~~~~~~~~~~~~~  148 (172)
                      +.+   +....++|.++|+.  +...|......+..++|++|||||.|||+.......   -++.............||.
T Consensus        72 ~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~~~~d~~~~~~~w~~~~~~~~~~wg~  151 (176)
T d1f1ua2          72 THEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDYYTGDPDNPTITWDVHDNQRRDWWGN  151 (176)
T ss_dssp             CSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCCCCSTTCCCEEEETTCGGGTCTTCC
T ss_pred             eccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCccccCCCCCCcccCcCCCccccccCC
Confidence            985   45566799999985  344455443224578999999999999998665421   1111112222334566787


Q ss_pred             ccchHH
Q 042945          149 ACSGEV  154 (172)
Q Consensus       149 ~~~~~~  154 (172)
                      +.+.+.
T Consensus       152 ~~~~~~  157 (176)
T d1f1ua2         152 PVVPSW  157 (176)
T ss_dssp             CCCGGG
T ss_pred             CCCchH
Confidence            666553

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.5e-19  Score=125.15  Aligned_cols=122  Identities=24%  Similarity=0.354  Sum_probs=83.7

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC---CCcceEEEEeC-------------------CeeEEEeecCC---
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS---FNFEGAWLFNH-------------------GIGIHLLESDK---   58 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~~~-------------------~~~l~l~~~~~---   58 (172)
                      -+++|+.|.|+|+++|++||+++|||++.....   ......+....                   .....+.....   
T Consensus        22 ~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (176)
T d1qipa_          22 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTED  101 (176)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGG
T ss_pred             eEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecccc
Confidence            569999999999999999999999999876532   11111222111                   11111111110   


Q ss_pred             -CC---cccCCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           59 -AP---EKRGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        59 -~~---~~~~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                       ..   ........+..|+++.++|+++++++|+++|+++..+|....+  .+.+|++|||||.|||++....
T Consensus       102 ~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~--~~~~f~~DPdG~~IElvq~~~~  172 (176)
T d1qipa_         102 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKM  172 (176)
T ss_dssp             CTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSS--TTCEEEECTTCCEEEEECTTTG
T ss_pred             ccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCc--eEEEEEECCCCCEEEEEeCCCC
Confidence             11   1111124467899999999999999999999999988754333  3558899999999999986553

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.80  E-value=1.2e-19  Score=121.46  Aligned_cols=113  Identities=15%  Similarity=0.147  Sum_probs=83.8

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCee--EEEeecCCCCcccCCCCCCcceEEEEeC-
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIG--IHLLESDKAPEKRGKINPKDNHISFQCS-   78 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~--l~l~~~~~~~~~~~~~~~g~~~v~~~v~-   78 (172)
                      .|++|+||+|.|+|++++.+||+++|||++..+.   ....++..++..  +.+....         ..+..|++|.|. 
T Consensus         1 ~i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~---~~~~~l~~~~~~~~l~~~~~~---------~~~~~h~~f~v~~   68 (132)
T d1kw3b1           1 SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSA---GDAALYRADQRAWRIAVQPGE---------LDDLAYAGLEVDD   68 (132)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEE---TTEEEEESSSBSCSEEEEECT---------TCEEEEEEEECSS
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHHhCCceeccc---cceeeeeeeecceeeeeeccC---------CCCceEEEEEecc
Confidence            4789999999999999999999999999998764   234555444332  3232211         236789999995 


Q ss_pred             --CHHHHHHHHHhCCCeEeeceeecCC--eeEEEEEEECCCCCEEEEEeecC
Q 042945           79 --DMKLVMRKLEEMNIEYETAVVDEGG--IQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        79 --dl~~~~~~l~~~G~~i~~~~~~~~~--~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                        +++++.+++.++|+++...+.....  ...+.+|++||+||.|||+....
T Consensus        69 ~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~~  120 (132)
T d1kw3b1          69 AAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPA  120 (132)
T ss_dssp             HHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECCC
Confidence              6888999999999998876532211  12367999999999999986433

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.78  E-value=3e-18  Score=118.35  Aligned_cols=126  Identities=10%  Similarity=0.050  Sum_probs=94.0

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC----c-ceEEEEeCCeeEEEeecCCCCcc--------cCCCC
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN----F-EGAWLFNHGIGIHLLESDKAPEK--------RGKIN   67 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~----~-~~~~~~~~~~~l~l~~~~~~~~~--------~~~~~   67 (172)
                      +++++|+||.|.|.|+++|++||+++|||+........    . ....+..+...+.+.+.......        ....+
T Consensus         3 ~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~g   82 (163)
T d1t47a1           3 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHG   82 (163)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHC
T ss_pred             CCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcCC
Confidence            46899999999999999999999999999988653111    1 12223345566777665433211        01135


Q ss_pred             CCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecC--CeeEEEEEEECCCCCEEEEEeecC
Q 042945           68 PKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEG--GIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        68 ~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~--~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      .|..|+||.|+|+++++++|+++|+++..+|....  +...+.+++++|+|..++|++...
T Consensus        83 ~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          83 DGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             CceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            67899999999999999999999999998886532  224578999999999999988654

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.77  E-value=1.9e-18  Score=114.94  Aligned_cols=116  Identities=19%  Similarity=0.248  Sum_probs=79.5

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC-CcceEEEEeCC-----eeEEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF-NFEGAWLFNHG-----IGIHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~-----~~l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      ++|.||+|.|+|+++|++||+++|||++..+.+. .....+.....     ......... .............++++.+
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   80 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN-YGVTSYKHDEAYGHIAIGV   80 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEE-TTCCCCCCCSSEEEEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccc-cCcccccCCCccceeeeeh
Confidence            6899999999999999999999999999876321 11122221111     111111111 1111122234556899999


Q ss_pred             CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeec
Q 042945           78 SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        78 ~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      +++.+.++++...++++..++     .+.+.+|++|||||+|||++..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          81 EDVKELVADMRKHDVPIDYED-----ESGFMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             SCHHHHHHHHHHTTCCEEEEC-----SSSSEEEEECTTSCEEEEEEHH
T ss_pred             hhHHHHHHHHHHcCCceeeCC-----CCcEEEEEECCCCCEEEEEECC
Confidence            999999999999999877643     2347799999999999999853

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.76  E-value=8.3e-18  Score=115.47  Aligned_cols=118  Identities=15%  Similarity=0.171  Sum_probs=78.3

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC-----C-CcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-----F-NFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-----~-~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      .+|+||+|.|+|++++.+||+++|||++.....     . .....++........+....      .+..++..|++|+|
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~------~~~~~gl~Hiaf~v   82 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAA------FPIPKRIHHFMLQA   82 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEEC------CSCSSSEEEEEEEB
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeecc------CCCCCceeEEEEEC
Confidence            689999999999999999999999999875421     0 01111222222211111111      11234789999999


Q ss_pred             CC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCC-EEEEEeecCCC
Q 042945           78 SD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGY-MIEICNCQNLP  128 (172)
Q Consensus        78 ~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~-~iei~~~~~~~  128 (172)
                      ++   +.+++++|+++|+.+.. +.+......+++|++||+|+ .+|+.......
T Consensus        83 ~~~ddv~~~~d~l~~~G~~~~g-~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~~~~  136 (156)
T d1kw3b2          83 NTIDDVGYAFDRLDAAGRITSL-LGRHTNDQTLSFYADTPSPMIEVEFGWGPRTV  136 (156)
T ss_dssp             SSHHHHHHHHHHHHHTTCBCBC-SEEESSSCCEEEEEECSSTTCEEEEEECCCBC
T ss_pred             CCHHHHHHHHHHHHhcCCceec-CcccCCCCeEEEEEECCCCCeEEEEecCCccc
Confidence            75   55578999999987654 43433223478999999998 59998765543

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=2e-17  Score=114.60  Aligned_cols=125  Identities=6%  Similarity=0.052  Sum_probs=90.3

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC----cceEEEE-eCCeeEEEeecCCCC------------ccc
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN----FEGAWLF-NHGIGIHLLESDKAP------------EKR   63 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~-~~~~~l~l~~~~~~~------------~~~   63 (172)
                      |++++++||.|.|.|++++++||+++|||+...+....    ....... .++..+.+.......            ..+
T Consensus         8 ~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~   87 (167)
T d1sqda1           8 FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIP   87 (167)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSST
T ss_pred             CCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccccc
Confidence            57899999999999999999999999999988763211    1112222 233333332221100            000


Q ss_pred             C-----------CCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           64 G-----------KINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        64 ~-----------~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      .           .++.|..||||.|+|+++++++|+++|+++..+|....+ +.+.++++.+.+.+++|++...
T Consensus        88 ~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          88 SFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             TCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECC
T ss_pred             cCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecCC
Confidence            0           124578999999999999999999999999998877654 4678899999899999999754

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.75  E-value=4.1e-17  Score=106.84  Aligned_cols=105  Identities=17%  Similarity=0.220  Sum_probs=79.6

Q ss_pred             EEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHHHHHHHHh
Q 042945           10 SFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEE   89 (172)
Q Consensus        10 ~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~~~~l~~   89 (172)
                      .|.|+|+++|++||++ |||++....   ....++...+..+.+........     .....++++.+++++++++.+++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~   77 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRD---AGWMILQRGDLMLEFFAHPGLDP-----LASWFSCCLRLDDLAEFYRQCKS   77 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEEC---SSEEEEEETTEEEEEEECTTCCG-----GGCCCEEEEEESCHHHHHHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEec---Cceeeeecceecccccccccccc-----CCCCcEEEEEECCHHHHHHHHhh
Confidence            4999999999999998 999998763   23444555666666666543322     12346899999999999999999


Q ss_pred             CCCeEee-------ceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           90 MNIEYET-------AVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        90 ~G~~i~~-------~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +|+.+..       ++.. .+||.+.+||+|||||+|||+|.
T Consensus        78 ~~~~~~~~~~~~~~~~~~-~~~G~r~~~~~DPDGn~iei~q~  118 (120)
T d1ecsa_          78 VGIQETSSGYPRIHAPEL-QGWGGTMAALVDPDGTLLRLIQN  118 (120)
T ss_dssp             TTCCBCSSSSSEEEEEEE-CTTSSEEEEEECTTSCEEEEEEC
T ss_pred             hhhhhcccccccccccee-cCCCcEEEEEECCCCCEEEEEEc
Confidence            8877643       3333 34677899999999999999985

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.6e-17  Score=113.01  Aligned_cols=125  Identities=16%  Similarity=0.134  Sum_probs=90.5

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCC---cce--EEEEeCCeeEEEeecCCCCccc-----CCCCCCcce
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFN---FEG--AWLFNHGIGIHLLESDKAPEKR-----GKINPKDNH   72 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~---~~~--~~~~~~~~~l~l~~~~~~~~~~-----~~~~~g~~~   72 (172)
                      +.+|+||.|.|+|+++|++||+++|||+........   ...  ..+..++..+.+..........     ...+.|..|
T Consensus         9 ~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~~h   88 (149)
T d1sqia1           9 FLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKD   88 (149)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEEE
T ss_pred             eeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeEEE
Confidence            578999999999999999999999999987653211   111  1233445566666544322111     123567889


Q ss_pred             EEEEeCCHHHHHHHHHhCCCeEeeceeecC-Cee-EEEEEEECCCCCEEEEEeecCC
Q 042945           73 ISFQCSDMKLVMRKLEEMNIEYETAVVDEG-GIQ-VDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        73 v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~-~~g-~~~~~~~DPdG~~iei~~~~~~  127 (172)
                      +||.|+|+++++++|+++|+++..+|.... +.| .+.++++.|.|..++|+|....
T Consensus        89 iaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~  145 (149)
T d1sqia1          89 IAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINY  145 (149)
T ss_dssp             EEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESC
T ss_pred             EEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCC
Confidence            999999999999999999999988875432 222 4678888888899999986553

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.74  E-value=2.2e-17  Score=108.16  Aligned_cols=105  Identities=14%  Similarity=0.139  Sum_probs=79.1

Q ss_pred             EEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHHHHHHHHh
Q 042945           10 SFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMRKLEE   89 (172)
Q Consensus        10 ~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~~~~l~~   89 (172)
                      .|.|+|+++|++||+++||+++..+.   ....++..++..+++........      ....++++.++|++++++++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~   80 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGD---RDFAGVRRGDIRLHISRTEHQIV------ADNTSAWIEVTDPDALHEEWAR   80 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEEC---SSEEEEEETTEEEEEEECSCHHH------HTTCEEEEEESCHHHHHHHHHT
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecC---CceeEeeeeeeeeeeeccccccc------cceeEEEEeechhHHHHHHHHh
Confidence            59999999999999999999998764   23455666777787776543221      2346899999999999999999


Q ss_pred             CCCeEeece-------eecCCeeEEEEEEECCCCCEEEEEee
Q 042945           90 MNIEYETAV-------VDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        90 ~G~~i~~~~-------~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      .++.....+       ... .++.+++|++|||||+|||.+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          81 AVSTDYADTSGPAMTPVGE-SPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             TSCSCTTCTTSCEECCCEE-ETTEEEEEEECTTCCEEEEEEC
T ss_pred             hcceEEeeccccccCcccc-CCCeEEEEEECCCCCEEEEEeC
Confidence            976543221       111 1245899999999999999874

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.71  E-value=1.7e-16  Score=110.49  Aligned_cols=125  Identities=10%  Similarity=0.054  Sum_probs=90.4

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCc----ceEEE-EeCCeeEEEeecCCCCcc--------------
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNF----EGAWL-FNHGIGIHLLESDKAPEK--------------   62 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~----~~~~~-~~~~~~l~l~~~~~~~~~--------------   62 (172)
                      .+++++||.|.|+|++++++||+++|||+...+.....    ..... ..+...+.+.........              
T Consensus        10 ~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (172)
T d1sp8a1          10 HTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAA   89 (172)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHH
T ss_pred             CcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcchh
Confidence            46899999999999999999999999999987532111    11122 223333333322211000              


Q ss_pred             ---cCCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecCC
Q 042945           63 ---RGKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQNL  127 (172)
Q Consensus        63 ---~~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~~  127 (172)
                         ...++.|..||||.|+|+++++++|+++|+++..+|....+ |.+.++++.|.+.+++|++....
T Consensus        90 ~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          90 RRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             HHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTT
T ss_pred             hhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCCC
Confidence               00125678999999999999999999999999998876544 56888999998888999998764

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.66  E-value=4.7e-15  Score=96.32  Aligned_cols=105  Identities=13%  Similarity=0.219  Sum_probs=76.6

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEeCCHHHHHHHH
Q 042945            8 HVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQCSDMKLVMRKL   87 (172)
Q Consensus         8 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v~dl~~~~~~l   87 (172)
                      +..|.|+|+++|++||+++|||++..+..   ...++..++..+++.......      ..+..++.+.+++++...+.+
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~   77 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED---DFAGVVRDDVTLFISAVQDQV------VPDNTQAWVWVRGLDELYAEW   77 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS---SEEEEEETTEEEEEEECSCTT------TGGGCEEEEEEECHHHHHHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC---CeeEEecccceeecccccccc------CCCCceEEEeeccHHHHHHHH
Confidence            34599999999999999999999987732   344555666777776554322      224468889999999998888


Q ss_pred             HhCCC--------eEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           88 EEMNI--------EYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        88 ~~~G~--------~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      .+.+.        .+..++... ++| +++|++|||||.|||+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~-~~g-~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          78 SEVVSTNFRDASGPAMTEIVEQ-PWG-REFALRDPAGNCVHFVA  119 (120)
T ss_dssp             TTTSBSCTTTCSSCEECCCEEE-TTE-EEEEEECTTCCEEEEEE
T ss_pred             HHhhhHHhhhcccccccCceec-CCE-EEEEEECCCCCEEEEEE
Confidence            76543        334444433 344 78999999999999985

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.65  E-value=1.1e-15  Score=101.98  Aligned_cols=114  Identities=13%  Similarity=0.056  Sum_probs=76.7

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCEEeeecCCCc----------ceEEEEeCCeeEEEeecCCCC-cccCCCCCCcceEEEEe
Q 042945            9 VSFVSKSVEKSVMFYEQVLGFVMIKRPSFNF----------EGAWLFNHGIGIHLLESDKAP-EKRGKINPKDNHISFQC   77 (172)
Q Consensus         9 v~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~----------~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~g~~~v~~~v   77 (172)
                      +.+.|.|+++|++||+++||+++..+.....          ....+..++..+.+....... .......+...++++.+
T Consensus        11 l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v   90 (135)
T d1xy7a_          11 LLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGT   90 (135)
T ss_dssp             EEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCCCTTSCCCEEEEEC
T ss_pred             EEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccccccCCCCCcceEEEEee
Confidence            4555679999999999999999876531111          011222334444444332211 11222233446999999


Q ss_pred             CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           78 SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        78 ~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      +|+++.++++.++|+++..++... .||.+.++++||+|+.|+|.|
T Consensus        91 ~d~~~~~~~~~~~g~~~~~~~~~~-~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          91 KDAEAAVAKAVDAGAVKVEVTEAE-VELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             SCHHHHHHHHHHTTCEECCCCHHH-HHTTEEEEEECTTSCEEEEEC
T ss_pred             cCcceeEEEeecccceEecCcccc-cccCEEEEEECCCCCEEEEeC
Confidence            999999999999999999877553 356688999999999999975

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.55  E-value=8.2e-15  Score=99.58  Aligned_cols=121  Identities=11%  Similarity=0.134  Sum_probs=88.3

Q ss_pred             CCcceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCCCcceEEEEeCCeeEEEeecCCCCcc---cCCCCCCcceEEEEe
Q 042945            1 MPILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSFNFEGAWLFNHGIGIHLLESDKAPEK---RGKINPKDNHISFQC   77 (172)
Q Consensus         1 m~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~---~~~~~~g~~~v~~~v   77 (172)
                      |-+.+|+||.+.|.|++++.+||++ |||+...+... ........+...+ ++..+.....   ...+++|..|+||.|
T Consensus         5 ~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~-~~~~l~~~G~i~l-l~~~~~~s~~~~~~~~hg~gv~hiaf~V   81 (150)
T d1cjxa1           5 MGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRS-KNVHLYRQGEINL-ILNNEPNSIASYFAAEHGPSVCGMAFRV   81 (150)
T ss_dssp             TCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESS-SSEEEEEETTEEE-EEECCSSSHHHHHHHHHSSEEEEEEEEE
T ss_pred             CccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccc-eEEEEEecCcEEE-EecCCCCCHhHhHHhhCCCceEEEEEEe
Confidence            4578999999999999999999987 99999887532 2233334444444 3332222111   122477889999999


Q ss_pred             CCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           78 SDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        78 ~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +|++++++++.+.|+++..++......  ....+++|+|.++.|++...
T Consensus        82 ~D~~~a~~~a~~~Ga~~i~~~~~~g~~--~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          82 KDSQKAYNRALELGAQPIHIDTGPMEL--NLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             SCHHHHHHHHHHTTCCBCCCCCCTTCB--CCCEEECGGGCEEEEECCCS
T ss_pred             CCHHHHHHHHHHCCCEEcccCCCCCce--eeeEEEcCCCCEEEEECcCC
Confidence            999999999999999988776543332  45788999999999998543

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.30  E-value=2.9e-10  Score=75.31  Aligned_cols=110  Identities=13%  Similarity=-0.002  Sum_probs=71.7

Q ss_pred             EEeC-CHHHHHHHHHHhhCCEEeeecCCCcc------------e---EEEEeCCeeEEEeecCCCCcccCCCCCCcceEE
Q 042945           11 FVSK-SVEKSVMFYEQVLGFVMIKRPSFNFE------------G---AWLFNHGIGIHLLESDKAPEKRGKINPKDNHIS   74 (172)
Q Consensus        11 l~v~-D~~~a~~FY~~~LG~~~~~~~~~~~~------------~---~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~   74 (172)
                      |... |.++|++||+++||+++......+..            .   ..+...+..+.+......   .....++..+++
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~---~~~~~~~~~~~~   84 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPA---YPYEGIKGCSIS   84 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTT---SCCCCCCSEEEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCc---ccccCCCcEEEE
Confidence            3344 99999999999999998764211110            0   112223333333222111   111234557888


Q ss_pred             EEeCCHH--HHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEee
Q 042945           75 FQCSDMK--LVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        75 ~~v~dl~--~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~  124 (172)
                      +.+++.+  +.+.++.++|.++..++.+. +||.+..+++||+|+.|+|...
T Consensus        85 l~~~~~d~~~~~~~~l~~G~~v~~p~~~~-~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          85 LNVDSKAEAERLFNALAEGGSVQMPLGPT-FWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             EECSSHHHHHHHHHHHHTTSEEEEEEEEE-TTEEEEEEEECTTSCEEEEEES
T ss_pred             EEcCCHHHHHHHHhhcccCceeecCcccc-CCCcEEEEEECCCCCEEEEEec
Confidence            8888655  44677778899999988764 4788899999999999999864

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=2.1e-11  Score=86.62  Aligned_cols=122  Identities=17%  Similarity=0.240  Sum_probs=80.4

Q ss_pred             cceeceEEEEeCC--HHHHHHHHHHhhCCEEeeecC---CCc-----ceEEEEe--CCeeEEEeecCCCCccc-------
Q 042945            3 ILSLNHVSFVSKS--VEKSVMFYEQVLGFVMIKRPS---FNF-----EGAWLFN--HGIGIHLLESDKAPEKR-------   63 (172)
Q Consensus         3 ~~~i~hv~l~v~D--~~~a~~FY~~~LG~~~~~~~~---~~~-----~~~~~~~--~~~~l~l~~~~~~~~~~-------   63 (172)
                      +++|+||++.|.+  +++++.||+++|||......+   ...     ....+..  +...+.+.++.......       
T Consensus        22 l~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~~fl~  101 (210)
T d1sqia2          22 LEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQEYVD  101 (210)
T ss_dssp             EEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHHHHHH
T ss_pred             cceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHHHHHh
Confidence            5789999999987  999999999999998765421   111     0111111  22334444433211111       


Q ss_pred             CCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceee----------c------CCe----eEEEEEEECCCCCEEEEEe
Q 042945           64 GKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVD----------E------GGI----QVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        64 ~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~----------~------~~~----g~~~~~~~DPdG~~iei~~  123 (172)
                      ...++|..||||.|+|+.++.++|+++|+++...|..          .      ..+    ....+|-+|.+|.++.|.+
T Consensus       102 ~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~~YY~~l~~r~~~~~~~~~~~~~~l~~~~IL~D~d~~g~llqifT  181 (210)
T d1sqia2         102 YNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLRENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQIFT  181 (210)
T ss_dssp             HHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCHHHHHHHHHHHHTCSSCCCSCHHHHHHHTCEEECCTTCEEEEEEB
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCcchhhhHHhhhhcccccccccHHHHHhcCEEEecCCCCeEEEEee
Confidence            1236788999999999999999999999999977721          0      000    0123778889999999997


Q ss_pred             e
Q 042945          124 C  124 (172)
Q Consensus       124 ~  124 (172)
                      .
T Consensus       182 ~  182 (210)
T d1sqia2         182 K  182 (210)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.20  E-value=2.8e-11  Score=85.21  Aligned_cols=122  Identities=17%  Similarity=0.242  Sum_probs=80.4

Q ss_pred             cceeceEEEEeC--CHHHHHHHHHHhhCCEEeeecCC-----CcceE--EEEeC---CeeEEEeecCCCCcc-------c
Q 042945            3 ILSLNHVSFVSK--SVEKSVMFYEQVLGFVMIKRPSF-----NFEGA--WLFNH---GIGIHLLESDKAPEK-------R   63 (172)
Q Consensus         3 ~~~i~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~-----~~~~~--~~~~~---~~~l~l~~~~~~~~~-------~   63 (172)
                      .++|+||++.|.  ++++++.||+++|||+.....+.     .....  .....   ...+.+-.+......       .
T Consensus         4 f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL~   83 (199)
T d1t47a2           4 FQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLE   83 (199)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHH
T ss_pred             ceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhhh
Confidence            578999999998  99999999999999988754210     01111  11111   222333332211110       0


Q ss_pred             CCCCCCcceEEEEeCCHHHHHHHHHhCCCeEeeceeecC------------Ce----eEEEEEEECCCCCEEEEEee
Q 042945           64 GKINPKDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEG------------GI----QVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        64 ~~~~~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~------------~~----g~~~~~~~DPdG~~iei~~~  124 (172)
                      ...++|..||||.|+|+.++.++|+++|+++...|..-.            .+    ....+|-+|++|.++.+.+.
T Consensus        84 ~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~~YY~~l~~r~~~~~~~~~~l~~~~IL~D~d~~g~llqift~  160 (199)
T d1t47a2          84 FYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTK  160 (199)
T ss_dssp             HHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBC
T ss_pred             hcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCChHHHHHHHHHhcccccCHHHHHhcCeEEecCCCCeEEEEEec
Confidence            123568899999999999999999999999988772111            00    01236778999999999874

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.19  E-value=2.6e-11  Score=85.86  Aligned_cols=96  Identities=17%  Similarity=0.210  Sum_probs=65.9

Q ss_pred             cceeceEEEEeC--CHHHHHHHHHHhhCCEEeeecCCC--cce---EEEEeC--CeeEEEeecCCCCcc------cCCCC
Q 042945            3 ILSLNHVSFVSK--SVEKSVMFYEQVLGFVMIKRPSFN--FEG---AWLFNH--GIGIHLLESDKAPEK------RGKIN   67 (172)
Q Consensus         3 ~~~i~hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~--~~~---~~~~~~--~~~l~l~~~~~~~~~------~~~~~   67 (172)
                      +++|+||++.|.  |+++++.||+++|||+.....+..  ...   ..+...  ...+.+..+......      ....+
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g   82 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNG   82 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTS
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCC
Confidence            578999999997  999999999999999987653211  111   111111  233333333221110      01235


Q ss_pred             CCcceEEEEeCCHHHHHHHHHhCCCeEeece
Q 042945           68 PKDNHISFQCSDMKLVMRKLEEMNIEYETAV   98 (172)
Q Consensus        68 ~g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~   98 (172)
                      +|..||||.|+|+.++.++|+++|+++...|
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            7889999999999999999999999988754

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.15  E-value=9.3e-11  Score=84.06  Aligned_cols=123  Identities=15%  Similarity=0.263  Sum_probs=78.0

Q ss_pred             CcceeceEEEEeCCHHHHHHHHHHhhCCEEeeec---CCC--c---ceEEEEe--CCeeEEEeecCCCCccc--------
Q 042945            2 PILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP---SFN--F---EGAWLFN--HGIGIHLLESDKAPEKR--------   63 (172)
Q Consensus         2 ~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~---~~~--~---~~~~~~~--~~~~l~l~~~~~~~~~~--------   63 (172)
                      .+++|+||++.|.|++++++||+++|||....+.   +..  .   ....+..  +...+.+.++..+....        
T Consensus         6 Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~FL~   85 (224)
T d1sp8a2           6 GLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLD   85 (224)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHH
T ss_pred             CcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHHHH
Confidence            4689999999999999999999999999986542   111  0   1111111  23445565543221111        


Q ss_pred             CCCCCCcceEEEEeCCHHHHHHHHHhCCC----eEeeceee--------cCC-------e----eEEEEEEECCCCCEEE
Q 042945           64 GKINPKDNHISFQCSDMKLVMRKLEEMNI----EYETAVVD--------EGG-------I----QVDQLFFHDPDGYMIE  120 (172)
Q Consensus        64 ~~~~~g~~~v~~~v~dl~~~~~~l~~~G~----~i~~~~~~--------~~~-------~----g~~~~~~~DPdG~~ie  120 (172)
                      ...++|.+||||.|+|+.++.+.|+++|+    +....|..        ..+       +    .....|-+|.+|+++.
T Consensus        86 ~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p~~~Yy~~~~~~~~~~l~~~~~~~l~~~~iL~D~d~~g~llQ  165 (224)
T d1sp8a2          86 HHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPTSDYYDGVRRRAGDVLTEAQIKECQELGVLVDRDDQGVLLQ  165 (224)
T ss_dssp             HHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEEEE
T ss_pred             hccCCCceeEEEEeCCHHHHHHHHHhccccccceecccchhhhhhhHHhhccccccHHHHHHHHHhCCCCCCCCCCEEEE
Confidence            11356889999999999999999998764    44443311        000       0    0113777888888888


Q ss_pred             EEee
Q 042945          121 ICNC  124 (172)
Q Consensus       121 i~~~  124 (172)
                      +.+.
T Consensus       166 ifT~  169 (224)
T d1sp8a2         166 IFTK  169 (224)
T ss_dssp             EEBC
T ss_pred             Eeee
Confidence            8874

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.94  E-value=9.7e-08  Score=62.69  Aligned_cols=112  Identities=12%  Similarity=0.034  Sum_probs=69.2

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCEEeeec----C----CCcc--eEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            8 HVSFVSKSVEKSVMFYEQVLGFVMIKRP----S----FNFE--GAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         8 hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~----~~~~--~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      ++.+.-.|.+++++||+++||...+.+.    +    ....  ..-+..++..+.+.......   ....+....+++.+
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~---~~~~~~~~s~~l~~   85 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRH---AFDFTPAFSFFVDC   85 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCC---SCCCCTTEEEEEEC
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCC---CCCCCCceEEEEEe
Confidence            4455556899999999999998754321    1    1111  12223345555555433211   11223446788888


Q ss_pred             CCHHHH--HHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           78 SDMKLV--MRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        78 ~dl~~~--~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      ++.++.  +.+..++|.++..++.+ ..||.+...++||.|+.|.|.-
T Consensus        86 ~~~d~~~~~~~~l~~gg~v~~p~~~-~~~g~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          86 ESNAQIERLAEALSDGGKALMPLGD-YGFSQRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             CCHHHHHHHHHHHHTTSEEEEEEEC-CSSSSEEEEEECTTSCEEEEEE
T ss_pred             ccHHHHHHHHHHHhcCCEEecCccc-ccccceEEEEECCCCCEEEEEc
Confidence            764443  44444668888887755 4577788999999999999863

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.86  E-value=3.9e-09  Score=75.69  Aligned_cols=122  Identities=12%  Similarity=0.181  Sum_probs=76.9

Q ss_pred             cceeceEEEEeCCHHHHHHHHHHhhCCEEeeecC-CC--cc-eEE----EEe--CCeeEEEeecCCCC---cc-----cC
Q 042945            3 ILSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPS-FN--FE-GAW----LFN--HGIGIHLLESDKAP---EK-----RG   64 (172)
Q Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-~~--~~-~~~----~~~--~~~~l~l~~~~~~~---~~-----~~   64 (172)
                      +++|+||++.|.|++++.+||+.+||+....... .+  .. ...    +..  +...+.+.++....   ..     ..
T Consensus        20 l~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~FL~~   99 (230)
T d1sqda2          20 IRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEH   99 (230)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHHHH
T ss_pred             cCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHHHHhh
Confidence            5789999999999999999999999998876531 11  10 000    111  22345555542211   10     01


Q ss_pred             CCCCCcceEEEEeCCHHHHHHHHHhCC----CeEe-eceee-------c-----CC--e----eEEEEEEECCCCCEEEE
Q 042945           65 KINPKDNHISFQCSDMKLVMRKLEEMN----IEYE-TAVVD-------E-----GG--I----QVDQLFFHDPDGYMIEI  121 (172)
Q Consensus        65 ~~~~g~~~v~~~v~dl~~~~~~l~~~G----~~i~-~~~~~-------~-----~~--~----g~~~~~~~DPdG~~iei  121 (172)
                      ..++|..||||.|+|+.++.++|+++|    +... .+|..       +     .+  +    ....+|-.|.+|+++.|
T Consensus       100 ~~G~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~~~~p~~YY~~l~~r~~~~l~~~~~~~l~~~~IL~D~d~~g~llqi  179 (230)
T d1sqda2         100 NEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQI  179 (230)
T ss_dssp             HTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEEEEE
T ss_pred             ccCCceeEEEEEeCCHHHHHHHHHHhhcccCcccccCCchHHHHHHHHHhccccchHhHHHHHHcCCcccCCCCCeEEEE
Confidence            246788999999999999999999975    4433 33310       0     00  0    11237778888888888


Q ss_pred             Eee
Q 042945          122 CNC  124 (172)
Q Consensus       122 ~~~  124 (172)
                      .+.
T Consensus       180 fT~  182 (230)
T d1sqda2         180 FTK  182 (230)
T ss_dssp             EBC
T ss_pred             ecc
Confidence            863

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.63  E-value=2e-06  Score=55.82  Aligned_cols=106  Identities=8%  Similarity=0.014  Sum_probs=63.9

Q ss_pred             EEEEeC-CHHHHHHHHHHhhCCEEeeec----C----CCcc--eEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEEe
Q 042945            9 VSFVSK-SVEKSVMFYEQVLGFVMIKRP----S----FNFE--GAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQC   77 (172)
Q Consensus         9 v~l~v~-D~~~a~~FY~~~LG~~~~~~~----~----~~~~--~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~v   77 (172)
                      -.|... |.+++++||+++||-..+.+.    +    ....  ..-+..++..+.+.......       +...++++.+
T Consensus         8 Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~~~-------~~~~s~~v~~   80 (129)
T d1tsja_           8 TFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGT-------ELPISLFVTV   80 (129)
T ss_dssp             EEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC--------------CCCEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCCCC-------CCCEEEEecc
Confidence            355565 999999999999976443221    0    0111  11223345555444322111       1124577888


Q ss_pred             CCHHH---HHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           78 SDMKL---VMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        78 ~dl~~---~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      ++.++   ++++|.+ |.++..++.+. +||.+...++||.|+.|.|..
T Consensus        81 ~~~~e~~~~~~~L~~-gg~v~~p~~~~-~~g~~~g~v~D~fGv~W~i~~  127 (129)
T d1tsja_          81 KDTIEMERLFNGLKD-EGAILMPKTNM-PPYREFAWVQDKFGVSFQLAL  127 (129)
T ss_dssp             SSHHHHHHHHHHHHT-TCEEEEEEEEE-TTEEEEEEEECTTSCEEEEEE
T ss_pred             CCHHHHHHHHHHhcc-CCEEecccccc-cccceEEEEECCCCCEEEEeC
Confidence            76665   5556654 55888766654 467788999999999999975

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.71  E-value=0.034  Score=36.35  Aligned_cols=100  Identities=12%  Similarity=0.084  Sum_probs=57.6

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCEEeee----cCC--C---cc--eEEEEeCCeeEEEeecCCCCcccCCCCCCcceEEEE
Q 042945            8 HVSFVSKSVEKSVMFYEQVLGFVMIKR----PSF--N---FE--GAWLFNHGIGIHLLESDKAPEKRGKINPKDNHISFQ   76 (172)
Q Consensus         8 hv~l~v~D~~~a~~FY~~~LG~~~~~~----~~~--~---~~--~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~~   76 (172)
                      -.-+.-.|-++|..||.++||-..+..    +..  +   ..  ...+..++..+...... +.    -..+...++++.
T Consensus         5 ~~L~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~~-~~----~~~~~~~sl~l~   79 (156)
T d1u69a_           5 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGG-PA----FRHSEAFSFQVA   79 (156)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECC-TT----CCCCTTEEEEEE
T ss_pred             EeeeECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecCC-CC----CCCCCCeEEEEe
Confidence            334455799999999999996533321    100  0   01  11222344444333221 11    112334688888


Q ss_pred             eCC---HHHHHHHHHhCCCeEeeceeecCCeeEEEEEEECCCCCEEEEEe
Q 042945           77 CSD---MKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICN  123 (172)
Q Consensus        77 v~d---l~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~  123 (172)
                      +++   +++++++|.+.| ++..    ..|      +++|+.|..|.|+.
T Consensus        80 ~d~~eE~d~~f~~LsegG-~~~~----~~G------~v~DkFGV~Wqi~~  118 (156)
T d1u69a_          80 TDDQAETDRLWNAIVDNG-GEES----ACG------WCRDKWGISWQITP  118 (156)
T ss_dssp             ESSHHHHHHHHHHHHHTT-CEEC----STT------EEECTTSCEEEEEE
T ss_pred             cCCHHHHHHHHHHHhccC-CCCC----CCe------EEECCCCCEEEeCh
Confidence            885   667778888766 2222    122      48999999999995

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=92.87  E-value=0.58  Score=28.87  Aligned_cols=59  Identities=20%  Similarity=0.302  Sum_probs=41.4

Q ss_pred             CcceEEEEeCCHHHHHHHHHhCCCeEeeceeecC----------CeeEEEEEEECCCC-CEEEEEeecCC
Q 042945           69 KDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEG----------GIQVDQLFFHDPDG-YMIEICNCQNL  127 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~----------~~g~~~~~~~DPdG-~~iei~~~~~~  127 (172)
                      +..|+++.|.|+++..+..++.|.++........          +......++..++| ..+++++....
T Consensus         9 ri~Hv~i~v~Dle~s~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~   78 (149)
T d1ss4a_           9 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTP   78 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEES
T ss_pred             EEeEEEEEeCCHHHHHHHHHHcCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccc
Confidence            5689999999999999999888987765432211          11345677778775 57777765443

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=92.43  E-value=0.47  Score=27.85  Aligned_cols=52  Identities=15%  Similarity=0.335  Sum_probs=39.7

Q ss_pred             CcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCCCEEEEEeecC
Q 042945           69 KDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDGYMIEICNCQN  126 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG~~iei~~~~~  126 (172)
                      +..||.+.|+|+++..+...+ .|.++....   .+   ...+..++++..+.+.....
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~   55 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GN---AFAVMRDNDGFILTLMKGKE   55 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TT---TEEEEECTTCCEEEEEECSS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEee---cC---cceeeeecceeeeeeeeeec
Confidence            568999999999999998887 698876532   11   33677888899998887544

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.67  E-value=0.34  Score=31.08  Aligned_cols=53  Identities=11%  Similarity=0.108  Sum_probs=37.4

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeec-CC--CcceEEE-EeCCeeEEEeecC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP-SF--NFEGAWL-FNHGIGIHLLESD   57 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~-~~--~~~~~~~-~~~~~~l~l~~~~   57 (172)
                      .++.||+|.|.|++++.+...+ .|.+....+ +.  +....++ ..++..+.+++..
T Consensus       103 ~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~  159 (167)
T d1sqda1         103 LGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK  159 (167)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEEC
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccCCcEEEEEecC
Confidence            3789999999999999999999 899988764 21  2222232 2345556677764

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=90.64  E-value=0.49  Score=29.24  Aligned_cols=56  Identities=14%  Similarity=0.235  Sum_probs=37.9

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecCCeeEEEEEEECCCC---CEEEEEe
Q 042945           68 PKDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEGGIQVDQLFFHDPDG---YMIEICN  123 (172)
Q Consensus        68 ~g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~~~g~~~~~~~DPdG---~~iei~~  123 (172)
                      .|..||++.|.|+++..+...+ .|.++..........+.+.+++.+..+   ..+++..
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   64 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFE   64 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEE
T ss_pred             cceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecc
Confidence            4789999999999999999987 699877654333322334455565543   4444443

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.83  E-value=0.41  Score=30.00  Aligned_cols=56  Identities=14%  Similarity=0.113  Sum_probs=35.3

Q ss_pred             CCcceEEEEeCCHHHHHHHHH-hCCCeEeeceeecCC-eeEEEEEEECCCCCEEEEEee
Q 042945           68 PKDNHISFQCSDMKLVMRKLE-EMNIEYETAVVDEGG-IQVDQLFFHDPDGYMIEICNC  124 (172)
Q Consensus        68 ~g~~~v~~~v~dl~~~~~~l~-~~G~~i~~~~~~~~~-~g~~~~~~~DPdG~~iei~~~  124 (172)
                      .+..||+|.|.|+++..+... ..|.+.........+ .....+.+.+ ++..+++.+.
T Consensus        10 ~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   67 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQ-GKIVFVLCSA   67 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEE-TTEEEEEEEE
T ss_pred             eeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecC-CcEEEEEEec
Confidence            456899999999999999886 469887654422222 1222333443 4556666653

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=89.28  E-value=0.48  Score=30.62  Aligned_cols=55  Identities=13%  Similarity=0.040  Sum_probs=39.6

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeec-C--CCcceEEEE-eCCeeEEEeecCCC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRP-S--FNFEGAWLF-NHGIGIHLLESDKA   59 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~-~--~~~~~~~~~-~~~~~l~l~~~~~~   59 (172)
                      .++.||+|.|.|++++.+-+.+ .|.++...+ +  .+....++. .++..+++++..+.
T Consensus        98 ~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          98 LAVRAVALRVADAEDAFRASVA-AGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHT-TTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCTT
T ss_pred             CceEEEEEeeCcHHHHHHHHHH-CcCEeccCCccCCCCEEEEEEECCCCcEEEEEecCCC
Confidence            3789999999999999999999 999987765 1  122222222 35667888887654

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=88.46  E-value=2.3  Score=28.07  Aligned_cols=74  Identities=14%  Similarity=0.047  Sum_probs=49.0

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeee-cCCCcceEEEE-------eCCeeEEEeecCCCCcccCCCCCCcceEEE
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKR-PSFNFEGAWLF-------NHGIGIHLLESDKAPEKRGKINPKDNHISF   75 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~-~~~~~~~~~~~-------~~~~~l~l~~~~~~~~~~~~~~~g~~~v~~   75 (172)
                      ..++|+.++|++.+.+.+|-+..+..-..-. ...+++-.++.       .++..+.+++.+.+.. ...+..|.-||.+
T Consensus        42 ~~~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~~Pl~~~~~~I~ciELP~P~~-k~Yp~eGWEHIEl  120 (190)
T d1k4na_          42 LTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGE-KRYPHEGWEHIEI  120 (190)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEECCCS-SCCSSCEEEEEEE
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhcCeeCCeeEEEEEcCCCceeCCcEEEEEEeCCCCC-CCCCCCCceEEEE
Confidence            4589999999999999999999886654432 22223333332       2455566776654432 3344668889999


Q ss_pred             EeC
Q 042945           76 QCS   78 (172)
Q Consensus        76 ~v~   78 (172)
                      .++
T Consensus       121 Vlp  123 (190)
T d1k4na_         121 VLP  123 (190)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            997

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=88.45  E-value=0.59  Score=29.76  Aligned_cols=57  Identities=5%  Similarity=0.035  Sum_probs=37.2

Q ss_pred             CCcceEEEEeCCHHHHHHHHHh-CCCeEeeceeecC-CeeEEEEEEECCCCCEEEEEeec
Q 042945           68 PKDNHISFQCSDMKLVMRKLEE-MNIEYETAVVDEG-GIQVDQLFFHDPDGYMIEICNCQ  125 (172)
Q Consensus        68 ~g~~~v~~~v~dl~~~~~~l~~-~G~~i~~~~~~~~-~~g~~~~~~~DPdG~~iei~~~~  125 (172)
                      .+..|++|.|.|+++..+..+. .|.++........ ..+ ...++....+..+++.+..
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~-~~~~~l~~~~~~i~l~~~~   64 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRE-TASYVLTNGSARFVLTSVI   64 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCS-EEEEEEEETTEEEEEEEES
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeeccccccee-EEEEEEecCCEEEEEeccC
Confidence            3578999999999999999986 6988765332222 112 2334344456667777643

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=86.58  E-value=1.1  Score=27.16  Aligned_cols=29  Identities=10%  Similarity=0.275  Sum_probs=25.9

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEee
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIK   33 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~   33 (172)
                      .+++|+++.|.|++++.+-.++ .|.++..
T Consensus        85 ~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~  113 (145)
T d1jc4a_          85 AGLHHMAWRVDDIDAVSATLRE-RGVQLLY  113 (145)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHH-HTCCBSC
T ss_pred             CcceEEEEecchHHHHHHHHHH-CCCEEeC
Confidence            4699999999999999999999 7998754

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=85.80  E-value=1.9  Score=27.79  Aligned_cols=54  Identities=13%  Similarity=0.193  Sum_probs=35.2

Q ss_pred             CcceEEEEeCCHHHHHHHHHhCCCeEeeceeecCCeeEEEEEEE-CCCCCEEEEEe
Q 042945           69 KDNHISFQCSDMKLVMRKLEEMNIEYETAVVDEGGIQVDQLFFH-DPDGYMIEICN  123 (172)
Q Consensus        69 g~~~v~~~v~dl~~~~~~l~~~G~~i~~~~~~~~~~g~~~~~~~-DPdG~~iei~~  123 (172)
                      ++.||++.|.|+++..+.....|.++........+. ....+.. +...+.+.+..
T Consensus         5 rl~Hv~l~v~Dle~s~~FYe~LGf~~~d~~~~~~~~-~~~~~~~~~~~~~~l~~~~   59 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYLEDLGFRVSEDIKDSDGV-TYAAWMHRKQTVHDTALTG   59 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCEEEEEEECTTCC-EEEEEEESSSSSCSEEEEE
T ss_pred             EeeeEEEEcCCHHHHHHHHHHCCCEEEEEEecCCcc-eeeeeeccCccccceeccc
Confidence            468999999999999998888899877544333332 2223333 44455555554

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=84.92  E-value=1.5  Score=27.64  Aligned_cols=53  Identities=17%  Similarity=0.048  Sum_probs=35.9

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC--CcceEEEE-eCCeeEEEeecC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF--NFEGAWLF-NHGIGIHLLESD   57 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~-~~~~~l~l~~~~   57 (172)
                      .+++||.+.|.|++++.+...+ +|.+....+..  ......+. .++..+.+++..
T Consensus        72 ~gv~hiaf~V~D~~~a~~~a~~-~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~~  127 (150)
T d1cjxa1          72 PSVCGMAFRVKDSQKAYNRALE-LGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF  127 (150)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCC
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCEEcccCCCCCceeeeEEEcCCCCEEEEECcC
Confidence            4689999999999999999998 99988765421  11122222 234556666543

>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=81.52  E-value=1.2  Score=24.37  Aligned_cols=27  Identities=19%  Similarity=0.309  Sum_probs=24.1

Q ss_pred             ceEEEEeCCHHHHHHHHHhCCCeEeec
Q 042945           71 NHISFQCSDMKLVMRKLEEMNIEYETA   97 (172)
Q Consensus        71 ~~v~~~v~dl~~~~~~l~~~G~~i~~~   97 (172)
                      ..+.|.|+|.+++.+.|+++|+++..+
T Consensus        39 ~~~vl~vdd~~~a~~~L~~~G~~vl~~   65 (71)
T d2f06a1          39 ANVVIRPSNMDKCIEVLKEKKVDLLAA   65 (71)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCEEECH
T ss_pred             EEEEEEECCHHHHHHHHHHCCCEEEch
Confidence            468999999999999999999998763

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.14  E-value=3.7  Score=25.86  Aligned_cols=54  Identities=22%  Similarity=0.346  Sum_probs=39.6

Q ss_pred             ceeceEEEEeCCHHHHHHHHHHhhCCEEeeecCC--CcceEEEE-eCCeeEEEeecCC
Q 042945            4 LSLNHVSFVSKSVEKSVMFYEQVLGFVMIKRPSF--NFEGAWLF-NHGIGIHLLESDK   58 (172)
Q Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~-~~~~~l~l~~~~~   58 (172)
                      .++.|+++.+.|+++..+.+++ .|.+....+..  .....|+. -.|..+|+++...
T Consensus       115 ~g~~h~~~~~~d~~~~~~~l~~-~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         115 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             CBEEEEEEECSCHHHHHHHHHH-TTCEEEECTTSSSSTTCEEEECTTCCEEEEECTTT
T ss_pred             cceeEEEeeHHHHHHHHHHHHH-CCCEEeeCCccCCceEEEEEECCCCCEEEEEeCCC
Confidence            4789999999999999999998 79998876422  12223332 3477888887653