Citrus Sinensis ID: 042952

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
Protein Sequence
PRNIEELEQEEQYGETPDPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKFSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQDSYDS
Secondary Structure (PSIPRED)
cccHHHHHHHHHcccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEccccccccccccHHHHHHcccEEEEcccHHHHHHcccHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcccEEEEcccEEEccccccccccccccccccccccccccccEEEcccccHHHHHHHHHHHHHccccccccccccccEEHHHHccccccccEEEEcccccccccHHHHHHHccccccHHHHHHHHHHHHHHccccEEEEEEcccccccccccccHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHccccccccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccEEEEEEEEcccHHHccHHHHHHHHHHHHHccccEEEEEEccccccccccccHHHHHHccccEEEEccHHHHHccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccEEEcccEEEEEccccccccEcccccccHHccccccccEEEEEccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccEEEccccccccccHHHHHHHHccccccccHHHHHHHHHHHHcccEEEEEEcccccccEccccHHHHHHHHHccEEEcccccc
Coil and Loop (DISEMBL)
PRNIEELeqeeqygetpdplippfwlkkegrMEWFQkklpdlevfqstnlsRAFHDRVLKFSTNQCAIQFFMVWlsparifrprdFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPdlaslvkdtpaETWLKQIkdgerdpgkisLSVQLSNLIRLAVLYKYggvyldtdfIVLKDfkglrnaigpqevDQATRKWKTLNNaalvfdkghpILFDFLQEFattfdgntwghngpyMLTRVTRrvgntpgynltilgleafypvnWVQIKRFfkkpateeesKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCilcqdsyds
Flexible Loop (DISEMBL)
prnieeleqeeqygetpdplippfWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKFSTNQCAIQFFMVWLSPARIFRPRDFLAVETLmkanphscLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAETWLkqikdgerdpgkiSLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFfkkpateeeskwvDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKshcilcqdsyds
Low Complexity Region (SEG)
PRNIeeleqeeqygeTPDPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKFSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQDSYDS
Disordered region (IsUnstruct)
*******************LIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKFSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAETWLKQIKDG***PGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQ*****
Disordered Region (DISOPRED)
**********************PFWLKKEGRMEWFQKKLP**********************TNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQDS***
Disordered Region (DISEMBL)
***************TPDPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKFSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQDSYDS
Disordered Region (DISPRO)
*****************DPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKFSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQD****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
PRNIEELEQEEQYGETPDPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKFSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQDSYDS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	349	2.2.26 [Sep-21-2011]
P0C8Q4	644	Uncharacterized protein A	no	no	0.782	0.423	0.328	1e-37
Q67BJ4	359	Lactosylceramide 4-alpha-	yes	no	0.593	0.576	0.322	2e-26
Q9JI93	360	Lactosylceramide 4-alpha-	yes	no	0.610	0.591	0.326	2e-25
Q9NPC4	353	Lactosylceramide 4-alpha-	yes	no	0.659	0.651	0.297	4e-25
Q9N291	353	Lactosylceramide 4-alpha-	yes	no	0.659	0.651	0.297	4e-25
Q9N290	327	Lactosylceramide 4-alpha-	N/A	no	0.659	0.703	0.297	5e-25
Q9N289	218	Lactosylceramide 4-alpha-	N/A	no	0.541	0.866	0.317	1e-24
Q9UNA3	340	Alpha-1,4-N-acetylglucosa	no	no	0.527	0.541	0.276	2e-19

>sp|P0C8Q4|Y4990_ARATH Uncharacterized protein At4g19900 OS=Arabidopsis thaliana GN=At4g19900 PE=2 SV=1

 Score =  157 bits (397), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 19/292 (6%)

Query: 61  FSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRS--LDTRRGYKILK 118
           F   +C+++ FMVW SP  +F  R    +E+L+  +  +C+V+ S +  LD  R      
Sbjct: 363 FRKEKCSMRVFMVWNSPGWMFSVRHQRGLESLLSQHRDACVVVFSETVELDFFRN----- 417

Query: 119 PLLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKY 178
             +   +K+    P+L  L++DTP   +     D  +           S L+RLA LYKY
Sbjct: 418 SFVKDSYKVAVAMPNLDELLQDTPTHVFASVWFDWRKTK---FYPTHYSELVRLAALYKY 474

Query: 179 GGVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFAT 238
           GGVYLD+D IVL     LRN IG +  DQ     ++LN A + F+K  P L + L E+  
Sbjct: 475 GGVYLDSDVIVLGSLSSLRNTIGME--DQVA--GESLNGAVMSFEKKSPFLLECLNEYYL 530

Query: 239 TFDGNTWGHNGPYMLTRVTRRVGNTPG-----YNLTILGLEAFYPVNWVQIKRFFKKPAT 293
           T+D      NG  +LTRV +R  N          L I     F+P+N  QI  +F  PA 
Sbjct: 531 TYDDKCLRCNGADLLTRVAKRFLNGKNRRMNQQELNIRPSSVFFPINSQQITNYFAYPAI 590

Query: 294 EEESKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQD 345
           E+E    DE+  ++  ES   H WN +T   +    S++ + +   CI C D
Sbjct: 591 EDERSQQDESFKKILNESLTFHFWNSVTSSLIPEPESLVAKFLDHSCIRCSD 642

Arabidopsis thaliana (taxid: 3702)

>sp|Q67BJ4|A4GAT_MOUSE Lactosylceramide 4-alpha-galactosyltransferase OS=Mus musculus GN=A4galt PE=2 SV=1

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 128/248 (51%), Gaps = 41/248 (16%)

Query: 88  AVETLMKANPHSCLVLISRSL--DTRRGYKILKPLLDLGFKILAVTP-------DLASLV 138
           +VE+  +A+P S +V++ + L  DT    +      +LG  +L+  P       DL  L 
Sbjct: 103 SVESAARAHPESQVVVLMKGLPRDTTAQPR------NLGISLLSCFPNVWIRPLDLQELF 156

Query: 139 KDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRN 198
           +DTP   W  + +    +P ++ +   LS+  R+A+L+K+GG+YLDTDFIVLK+   L N
Sbjct: 157 EDTPLAAWYSEARH-RWEPYQLPV---LSDASRIALLWKFGGIYLDTDFIVLKNLLNLTN 212

Query: 199 AIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTR 258
            +G Q           LN A L F++ H  L   L +F   ++G  WGH GP +LTRV +
Sbjct: 213 TLGIQSR-------YVLNGAFLAFERKHEFLALCLHDFVANYNGWIWGHQGPQLLTRVFK 265

Query: 259 RVGNTPGY-------NLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEES 311
           +  +            +T L  EAFYP+ W   K++F+  + EE ++ ++ T        
Sbjct: 266 KWCSIQSLEKSHACRGVTALPPEAFYPIPWQNWKKYFEDISPEELTQLLNAT-------- 317

Query: 312 YGLHLWNK 319
           Y +H+WNK
Sbjct: 318 YAVHVWNK 325

Necessary for the biosynthesis of the Pk antigen of blood histogroup P. Catalyzes the transfer of galactose to lactosylceramide and galactosylceramide. Necessary for the synthesis of the receptor for bacterial verotoxins.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 8

>sp|Q9JI93|A4GAT_RAT Lactosylceramide 4-alpha-galactosyltransferase OS=Rattus norvegicus GN=A4galt PE=1 SV=1

 Score =  116 bits (291), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 128/242 (52%), Gaps = 29/242 (11%)

Query: 88  AVETLMKANPHSCLVLISRSL--DTRRGYKILKPLLDLGFKILAVTP-DLASLVKDTPAE 144
           +VE+  +A+P S +V++ + L  DT    + L   L   F  + + P DL  L +DTP  
Sbjct: 104 SVESAARAHPESQVVVLMKGLPRDTTAWPRNLGISLLSCFPNVQIRPLDLQELFEDTPLA 163

Query: 145 TWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQE 204
            W  + +    +P  + +   LS+  R+A+L+K+GG+YLDTDFIVLK+ + L N +G Q 
Sbjct: 164 AWYLEAQH-RWEPYLLPV---LSDASRIALLWKFGGIYLDTDFIVLKNLRNLTNMLGIQS 219

Query: 205 VDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTP 264
                     LN A L F++ H  L   +++F   ++G  WGH GP +LTRV ++  +  
Sbjct: 220 R-------YVLNGAFLAFERKHEFLALCIRDFVAHYNGWIWGHQGPQLLTRVFKKWCSIH 272

Query: 265 GY-------NLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLW 317
                     +T L  EAFYP+ W   K++F+  + EE ++ ++ T        Y +H+W
Sbjct: 273 SLKESRACRGVTALPPEAFYPIPWQNWKKYFEDVSPEELAQLLNAT--------YAVHVW 324

Query: 318 NK 319
           NK
Sbjct: 325 NK 326

Necessary for the biosynthesis of the Pk antigen of blood histogroup P. Catalyzes the transfer of galactose to lactosylceramide and galactosylceramide. Necessary for the synthesis of the receptor for bacterial verotoxins.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 8

>sp|Q9NPC4|A4GAT_HUMAN Lactosylceramide 4-alpha-galactosyltransferase OS=Homo sapiens GN=A4GALT PE=2 SV=1

 Score =  115 bits (289), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 137/269 (50%), Gaps = 39/269 (14%)

Query: 88  AVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTP-------DLASLVKD 140
           +VE+  + +P S ++++ + L    G     P   LG  +L+  P       DL  L +D
Sbjct: 97  SVESAARTHPESHVLVLMKGLP---GGNASLPR-HLGISLLSCFPNVQMLPLDLRELFRD 152

Query: 141 TPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAI 200
           TP   W   ++ G  +P  + +   LS+  R+A+++K+GG+YLDTDFIVLK+ + L N +
Sbjct: 153 TPLADWYAAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVL 208

Query: 201 GPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRR- 259
           G       T+    LN A L F++ H  +   +++F   ++G  WGH GP +LTRV ++ 
Sbjct: 209 G-------TQSRYVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKW 261

Query: 260 ------VGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYG 313
                   +     +T L  EAFYP+ W   K++F+    EE        + RL   +Y 
Sbjct: 262 CSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYFEDINPEE--------LPRLLSATYA 313

Query: 314 LHLWNKITR--KFVINEGSVIHRLIKSHC 340
           +H+WNK ++  +F     +++ +L   +C
Sbjct: 314 VHVWNKKSQGTRFEATSRALLAQLHARYC 342

Necessary for the biosynthesis of the Pk antigen of blood histogroup P. Catalyzes the transfer of galactose to lactosylceramide and galactosylceramide. Necessary for the synthesis of the receptor for bacterial verotoxins.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 8

>sp|Q9N291|A4GAT_PANTR Lactosylceramide 4-alpha-galactosyltransferase OS=Pan troglodytes GN=A4GALT PE=3 SV=1

 Score =  115 bits (288), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 137/269 (50%), Gaps = 39/269 (14%)

Query: 88  AVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTP-------DLASLVKD 140
           +VE+  + +P S ++++ + L    G     P   LG  +L+  P       DL  L +D
Sbjct: 97  SVESAARTHPESHVLVLMKGLP---GGNASLPR-HLGISLLSCFPNVQMLPLDLRELFQD 152

Query: 141 TPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAI 200
           TP   W   ++ G  +P  + +   LS+  R+A+++K+GG+YLDTDFIVLK+ + L N +
Sbjct: 153 TPLADWYAAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVL 208

Query: 201 GPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRR- 259
           G       T+    LN A L F++ H  +   +++F   ++G  WGH GP +LTRV ++ 
Sbjct: 209 G-------TQSRYVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKW 261

Query: 260 ------VGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYG 313
                   +     +T L  EAFYP+ W   K++F+    EE        + RL   +Y 
Sbjct: 262 CSIRSLAESRSCRGVTTLPPEAFYPIPWQDWKKYFEDINPEE--------LPRLLSATYA 313

Query: 314 LHLWNKITR--KFVINEGSVIHRLIKSHC 340
           +H+WNK ++  +F     +++ +L   +C
Sbjct: 314 VHVWNKKSQGTRFEATSRALLAQLHARYC 342

Catalyzes the transfer of galactose to lactosylceramide and galactosylceramide. Necessary for the synthesis of the receptor for bacterial verotoxins.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 8

>sp|Q9N290|A4GAT_GORGO Lactosylceramide 4-alpha-galactosyltransferase (Fragment) OS=Gorilla gorilla gorilla GN=A4GALT PE=3 SV=1

 Score =  115 bits (288), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 136/269 (50%), Gaps = 39/269 (14%)

Query: 88  AVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTP-------DLASLVKD 140
           +VE+  + +P S ++++ + L    G     P   LG  +L+  P       DL  L +D
Sbjct: 71  SVESAARTHPESHVLVLMKGLP---GGNASLPR-HLGISLLSCFPNVQMLPLDLRELFRD 126

Query: 141 TPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAI 200
           TP   W   ++ G  +P  + +   LS+  R+A+++K+GG+YLDTDFIVLK+ + L N +
Sbjct: 127 TPLADWYAAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVL 182

Query: 201 GPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRR- 259
           G       T+    LN A L F++ H  +   + +F   ++G  WGH GP +LTRV ++ 
Sbjct: 183 G-------TQSRYVLNGAFLAFERXHEFMALCMXDFVDHYNGWIWGHQGPQLLTRVFKKW 235

Query: 260 ------VGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYG 313
                   +     +T L  EAFYP+ W   K++F+    EE        + RL   +Y 
Sbjct: 236 CSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYFEDINPEE--------LPRLFSATYA 287

Query: 314 LHLWNKITR--KFVINEGSVIHRLIKSHC 340
           +H+WNK ++  +F     +++ +L   +C
Sbjct: 288 VHVWNKKSQGTRFEATSRALLAQLHARYC 316

Catalyzes the transfer of galactose to lactosylceramide and galactosylceramide. Necessary for the synthesis of the receptor for bacterial verotoxins.

Gorilla gorilla gorilla (taxid: 9595)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 8

>sp|Q9N289|A4GAT_PONPY Lactosylceramide 4-alpha-galactosyltransferase (Fragment) OS=Pongo pygmaeus GN=A4GALT PE=3 SV=1

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 28/217 (12%)

Query: 133 DLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKD 192
           DL  L +DTP   W   ++ G  +P  + +   LS+  R+A+++K+GG+YLDTDFIVLK+
Sbjct: 10  DLRELFRDTPLADWYTAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKN 65

Query: 193 FKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYM 252
            + L N +G Q           LN A L F + H  +   +++F   ++G  WGH GP +
Sbjct: 66  LRNLTNVLGTQSR-------YVLNGAFLAFQRRHEFMALCMRDFVDHYNGWIWGHQGPQL 118

Query: 253 LTRVTRR-------VGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVL 305
           LTRV ++         +     +T L  EAFYP+ W   K++F+  + EE        + 
Sbjct: 119 LTRVFKKWCSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYFEDISPEE--------LP 170

Query: 306 RLSEESYGLHLWNKITR--KFVINEGSVIHRLIKSHC 340
           RL   +Y +H+WNK ++  +F     +++ +L   +C
Sbjct: 171 RLLNATYAVHVWNKKSQGTRFEATSRALLAQLHARYC 207

Catalyzes the transfer of galactose to lactosylceramide and galactosylceramide. Necessary for the synthesis of the receptor for bacterial verotoxins.

Pongo pygmaeus (taxid: 9600)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 8

>sp|Q9UNA3|A4GCT_HUMAN Alpha-1,4-N-acetylglucosaminyltransferase OS=Homo sapiens GN=A4GNT PE=2 SV=1

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 37/221 (16%)

Query: 133 DLASLVKDTPAETWLKQIK-DGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLK 191
           D+  L++DTP  +W  QI    ER+   IS     S+  RLA+++KYGG+Y+DTD I ++
Sbjct: 120 DMKRLLEDTPLFSWYNQINASAERNWLHIS-----SDASRLAIIWKYGGIYMDTDVISIR 174

Query: 192 DFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPY 251
                     P+E   A +  +  +N    F   HP L++ ++ F   ++   WG+ GP 
Sbjct: 175 PI--------PEENFLAAQASRYSSNGIFGFLPHHPFLWECMENFVEHYNSAIWGNQGPE 226

Query: 252 MLTRVTR---------RVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDE 302
           ++TR+ R          V +    N++ L  + FYP+++ + +R+++         W  E
Sbjct: 227 LMTRMLRVWCKLEDFQEVSDLRCLNISFLHPQRFYPISYREWRRYYE--------VWDTE 278

Query: 303 TVLRLSEESYGLHLWNKIT---RKFVINEGSVIHRLIKSHC 340
               +   SY LHLWN +    R  +    +++  L + HC
Sbjct: 279 PSFNV---SYALHLWNHMNQEGRAVIRGSNTLVENLYRKHC 316

Necessary for the synthesis of type III mucin. Catalyzes the transfer of N-acetylglucosamine (GlcNAc) to core 2 branched O-glycans.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
297827369	750	predicted protein [Arabidopsis lyrata su	0.957	0.445	0.564	1e-118
145360743	405	lactosylceramide 4-alpha-galactosyltrans	0.994	0.856	0.554	1e-115
3335363	736	hypothetical protein [Arabidopsis thalia	0.994	0.471	0.554	1e-115
255581057	413	lactosylceramide 4-alpha-galactosyltrans	0.979	0.828	0.537	1e-111
449440279	414	PREDICTED: lactosylceramide 4-alpha-gala	0.985	0.830	0.517	1e-108
449483691	414	PREDICTED: lactosylceramide 4-alpha-gala	0.985	0.830	0.514	1e-108
356494971	420	PREDICTED: uncharacterized protein At4g1	0.965	0.802	0.513	1e-106
225440658	416	PREDICTED: uncharacterized protein At4g1	1.0	0.838	0.507	1e-105
147853779	413	hypothetical protein VITISV_030953 [Viti	1.0	0.845	0.507	1e-105
297740224	495	unnamed protein product [Vitis vinifera]	1.0	0.705	0.507	1e-105

>gi|297827369|ref|XP_002881567.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297327406|gb|EFH57826.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 196/347 (56%), Positives = 258/347 (74%)

Query: 3   NIEELEQEEQYGETPDPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKFS 62
           NI  +   E   +  DPL+PP    K  R++WF++KLP+LE+ +ST  ++ FH RVL   
Sbjct: 402 NINSVLDSEYNEKELDPLVPPRKASKNERIDWFRRKLPELEILKSTTKNKRFHKRVLDLY 461

Query: 63  TNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLD 122
            N C+ QFFM+WLSPA+ F PR+ LAV+TL   NP +CL ++S SLD+ RGY ILKPLLD
Sbjct: 462 INNCSAQFFMIWLSPAKSFGPREMLAVDTLFTTNPGACLAILSNSLDSPRGYTILKPLLD 521

Query: 123 LGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVY 182
            GF ++AVT D+  LVK+TPAE WLK++K G  DPG I L + LS+L RLAVLYKYGGVY
Sbjct: 522 RGFNLIAVTLDIPFLVKNTPAEAWLKRLKSGHMDPGSIPLFMNLSDLTRLAVLYKYGGVY 581

Query: 183 LDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDG 242
           LDTD I L D  GLRNAIG Q +D  T++W  LNNA +VFD  HP++ +FLQE+ATTFDG
Sbjct: 582 LDTDIIFLNDMTGLRNAIGAQSIDPGTKRWTRLNNAVMVFDIYHPLMREFLQEYATTFDG 641

Query: 243 NTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDE 302
           N WG+N PY+++RV +R+GN PGYNLTI   +AFYPVNW++I++ FKKPAT  E+KWV++
Sbjct: 642 NRWGYNSPYLVSRVIKRLGNKPGYNLTIFSPDAFYPVNWIKIQKLFKKPATTREAKWVEK 701

Query: 303 TVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQDSYDS 349
           TV  +++ SY +HLWNK+TRK  I EGSV+H LI +HC +C++  +S
Sbjct: 702 TVQDMNKGSYMIHLWNKVTRKIKIEEGSVMHTLISTHCTVCRNITNS 748

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145360743|ref|NP_181350.2| lactosylceramide 4-alpha-galactosyltransferase [Arabidopsis thaliana] gi|330254401|gb|AEC09495.1| lactosylceramide 4-alpha-galactosyltransferase [Arabidopsis thaliana]

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 193/348 (55%), Positives = 254/348 (72%), Gaps = 1/348 (0%)

Query: 3   NIEELEQEEQYGETPDPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKFS 62
           NI  +   E   +  DPL+PP    K  R++WF++KLP+LE+ +ST  S++FH RVL   
Sbjct: 56  NINSVVDSEHKEKELDPLLPPRKASKNQRIDWFRRKLPELEILKSTTKSKSFHTRVLDLY 115

Query: 63  TNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLD 122
              C+ QFFM+WLSPA  F PR+ LA++TL   NP +CL ++S SLD+  GY ILKPL D
Sbjct: 116 NKNCSAQFFMIWLSPANSFGPREMLAIDTLFTTNPGACLAILSNSLDSPNGYTILKPLFD 175

Query: 123 LGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVY 182
            GF ++AVT D+  LVK+TPAE WLK++K G  DPG I L + LS+L RLAVLYKYGGVY
Sbjct: 176 QGFNLIAVTIDIPFLVKNTPAEAWLKRLKSGNMDPGSIPLFMNLSDLTRLAVLYKYGGVY 235

Query: 183 LDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDG 242
           LDTD I L D  GLRNAIG Q  D AT++W  LNNA +VFD  HP++ +FLQE+ATTFDG
Sbjct: 236 LDTDIIFLNDMTGLRNAIGAQSSDPATKRWTRLNNAVMVFDIYHPLMREFLQEYATTFDG 295

Query: 243 NTWGHNGPYMLTRVTRRVGNTPGY-NLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVD 301
           N WG+N PY+++RV +R+GN PGY NLTI   +AFYPVNW++I++ FKKPAT  E+KWV+
Sbjct: 296 NKWGYNSPYLVSRVIKRLGNKPGYNNLTIFSPDAFYPVNWIKIQKLFKKPATTREAKWVE 355

Query: 302 ETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQDSYDS 349
           +TV  +++ SY +HLWNK+TRK  I EGSV+H L+ +HC +C +  +S
Sbjct: 356 KTVQDMNKGSYMIHLWNKVTRKIKIEEGSVMHTLVSTHCTVCGNITNS 403

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3335363|gb|AAC27164.1| hypothetical protein [Arabidopsis thaliana]

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 193/348 (55%), Positives = 254/348 (72%), Gaps = 1/348 (0%)

Query: 3   NIEELEQEEQYGETPDPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKFS 62
           NI  +   E   +  DPL+PP    K  R++WF++KLP+LE+ +ST  S++FH RVL   
Sbjct: 387 NINSVVDSEHKEKELDPLLPPRKASKNQRIDWFRRKLPELEILKSTTKSKSFHTRVLDLY 446

Query: 63  TNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLD 122
              C+ QFFM+WLSPA  F PR+ LA++TL   NP +CL ++S SLD+  GY ILKPL D
Sbjct: 447 NKNCSAQFFMIWLSPANSFGPREMLAIDTLFTTNPGACLAILSNSLDSPNGYTILKPLFD 506

Query: 123 LGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVY 182
            GF ++AVT D+  LVK+TPAE WLK++K G  DPG I L + LS+L RLAVLYKYGGVY
Sbjct: 507 QGFNLIAVTIDIPFLVKNTPAEAWLKRLKSGNMDPGSIPLFMNLSDLTRLAVLYKYGGVY 566

Query: 183 LDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDG 242
           LDTD I L D  GLRNAIG Q  D AT++W  LNNA +VFD  HP++ +FLQE+ATTFDG
Sbjct: 567 LDTDIIFLNDMTGLRNAIGAQSSDPATKRWTRLNNAVMVFDIYHPLMREFLQEYATTFDG 626

Query: 243 NTWGHNGPYMLTRVTRRVGNTPGY-NLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVD 301
           N WG+N PY+++RV +R+GN PGY NLTI   +AFYPVNW++I++ FKKPAT  E+KWV+
Sbjct: 627 NKWGYNSPYLVSRVIKRLGNKPGYNNLTIFSPDAFYPVNWIKIQKLFKKPATTREAKWVE 686

Query: 302 ETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQDSYDS 349
           +TV  +++ SY +HLWNK+TRK  I EGSV+H L+ +HC +C +  +S
Sbjct: 687 KTVQDMNKGSYMIHLWNKVTRKIKIEEGSVMHTLVSTHCTVCGNITNS 734

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581057|ref|XP_002531344.1| lactosylceramide 4-alpha-galactosyltransferase, putative [Ricinus communis] gi|223529042|gb|EEF31028.1| lactosylceramide 4-alpha-galactosyltransferase, putative [Ricinus communis]

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/348 (53%), Positives = 256/348 (73%), Gaps = 6/348 (1%)

Query: 3   NIEELEQEEQYGETPDPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKFS 62
           NI+E+  +E      + L+ PF + +E R+ WF++KLP LE+F+S  L+R FH RVL+F 
Sbjct: 71  NIDEVRIDEL-----NSLVAPFNVTEEERIIWFKRKLPGLEIFKSNELTRQFHSRVLEFF 125

Query: 63  TNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLD 122
             +C +QFFM W+SP   F  R+FLA+++L K +P+ CL+++S ++D+ +GY+ILKPL+D
Sbjct: 126 DQKCDVQFFMTWISPVSSFGRREFLAMDSLFKVHPNGCLMILSGTMDSIQGYRILKPLVD 185

Query: 123 LGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVY 182
           +GFK+ AVTPDL  L K+TPAE WL+++  G +DPG+I LS  LSNLIRLAV+YKYGG+Y
Sbjct: 186 VGFKVAAVTPDLQFLFKNTPAEIWLQEMMSGNKDPGEIPLSQNLSNLIRLAVIYKYGGIY 245

Query: 183 LDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDG 242
           +DTDFI LK FKGLRN+IG Q +D  +R W  LNNA LVFDK HP+++ F++EFA TFDG
Sbjct: 246 IDTDFIFLKSFKGLRNSIGAQSIDAVSRNWTRLNNAVLVFDKNHPLMYKFIEEFAATFDG 305

Query: 243 NTWGHNGPYMLTRVTRRVGNTPGY-NLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVD 301
           N WGHNGPY+++RV  RV   P Y N T+L  +AFYPV+W +I  FFKKP  +  S+WV 
Sbjct: 306 NKWGHNGPYLVSRVVARVAGRPEYNNFTVLPPKAFYPVDWNRIGGFFKKPEDQAASRWVK 365

Query: 302 ETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQDSYDS 349
             +L+LS E+YGLHLWNK + +  I EGSV+  LI  HC++C+  Y S
Sbjct: 366 AKLLQLSGETYGLHLWNKQSCRIRIEEGSVMAGLISDHCVICEYDYSS 413

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440279|ref|XP_004137912.1| PREDICTED: lactosylceramide 4-alpha-galactosyltransferase-like [Cucumis sativus]

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 180/348 (51%), Positives = 246/348 (70%), Gaps = 4/348 (1%)

Query: 1   PRNIEELEQEEQYGETPDPLIPPFWLK-KEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVL 59
           PR      ++E   ET D L+ P  L  KE R++WF+  LP+  + QS NL++ FHDR+L
Sbjct: 65  PRQSSPENRDEDDSETFDSLVVPSNLSAKEARVDWFRNHLPNFRILQSNNLTQQFHDRLL 124

Query: 60  KFSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKP 119
           +F +++C +QFFM W+SPAR FR R+ +A E++ K++P  CL +ISR+LD+ RG KILKP
Sbjct: 125 EFLSHECEVQFFMTWVSPARSFRERELMAAESVFKSHPRGCLTIISRTLDSERGCKILKP 184

Query: 120 LLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYG 179
           LLD GFKI A+ PDL  L K+TP E W  ++K G++DPG+I L+  LSNL+RLAVLYKYG
Sbjct: 185 LLDHGFKIQAIAPDLPLLFKNTPVEAWFDEMKSGKKDPGQIPLAQNLSNLMRLAVLYKYG 244

Query: 180 GVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATT 239
           GVY+DTDFIVLK F GL+N+IG Q +D  T+ W  LNNA LVFDK HP+L  F++ FA+ 
Sbjct: 245 GVYIDTDFIVLKSFMGLKNSIGAQSIDPVTKNWTILNNAVLVFDKKHPLLEKFMENFASN 304

Query: 240 FDGNTWGHNGPYMLTRVTRRVGNT---PGYNLTILGLEAFYPVNWVQIKRFFKKPATEEE 296
           FDG+ WGHNGP++++RV  ++      PG+N+TIL   AFYPV+W++I   FKKP     
Sbjct: 305 FDGSRWGHNGPFLVSRVIAKITGARAKPGFNVTILPPAAFYPVDWIKIGELFKKPGNRAV 364

Query: 297 SKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQ 344
             W    + +L+ E+YG+HLWNK ++ +VI +GSVI RL   HCI+C 
Sbjct: 365 ESWAKAKLDQLNNETYGIHLWNKQSKSYVIQKGSVIERLFADHCIICS 412

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449483691|ref|XP_004156661.1| PREDICTED: lactosylceramide 4-alpha-galactosyltransferase-like [Cucumis sativus]

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 179/348 (51%), Positives = 246/348 (70%), Gaps = 4/348 (1%)

Query: 1   PRNIEELEQEEQYGETPDPLIPPFWLK-KEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVL 59
           PR      ++E   ET D L+ P  L  KE R++WF+  LP+  + QS NL++ FHDR+L
Sbjct: 65  PRQSSPENRDEDDSETFDSLVVPSNLSAKEARVDWFRNHLPNFRILQSNNLTQQFHDRLL 124

Query: 60  KFSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKP 119
           +F +++C +QFFM W+SPAR FR R+ +A E++ K++P  CL +ISR+LD+ RG KILKP
Sbjct: 125 EFLSHECEVQFFMTWVSPARSFRERELMAAESVFKSHPRGCLTIISRTLDSERGCKILKP 184

Query: 120 LLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYG 179
           LLD GFKI A+ PDL  L K+TP E W  ++K G++DPG+I L+  LSNL+RLAVLYKYG
Sbjct: 185 LLDHGFKIQAIAPDLPLLFKNTPVEAWFDEMKSGKKDPGQIPLAQNLSNLMRLAVLYKYG 244

Query: 180 GVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATT 239
           GVY+DTDFIVLK F GL+N+IG Q +D  T+ W  LNNA LVFDK HP+L  F++ FA+ 
Sbjct: 245 GVYIDTDFIVLKSFMGLKNSIGAQSIDPVTKNWTILNNAVLVFDKKHPLLEKFMENFASN 304

Query: 240 FDGNTWGHNGPYMLTRVTRRVGNT---PGYNLTILGLEAFYPVNWVQIKRFFKKPATEEE 296
           FDG+ WGHNGP++++RV  ++      PG+N+T+L   AFYPV+W++I   FKKP     
Sbjct: 305 FDGSRWGHNGPFLVSRVIAKITGARAKPGFNVTVLPPAAFYPVDWIKIGELFKKPGNRAV 364

Query: 297 SKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQ 344
             W    + +L+ E+YG+HLWNK ++ +VI +GSVI RL   HCI+C 
Sbjct: 365 ESWAKAKLDQLNNETYGIHLWNKQSKSYVIQKGSVIERLFSDHCIICS 412

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356494971|ref|XP_003516354.1| PREDICTED: uncharacterized protein At4g19900-like [Glycine max]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 173/337 (51%), Positives = 242/337 (71%)

Query: 8   EQEEQYGETPDPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKFSTNQCA 67
           E++E        L+ PF   +E R+ W Q +L + ++F+S NL+R F+ RVL F   +C 
Sbjct: 74  EKDEANSRNQKALVAPFNATEEERIAWLQGQLHNFKIFKSNNLTRQFNARVLGFLGRKCE 133

Query: 68  IQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKI 127
           +QFFM W+SPA +F  R+ L+VE++ K +P +CL+++SR+LD+R GY+ILKPLLD GFK+
Sbjct: 134 VQFFMTWISPASLFGGRELLSVESIFKNHPKACLIILSRTLDSRHGYRILKPLLDRGFKV 193

Query: 128 LAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDF 187
            A  PDL+ LVK TP E W ++++ G +DPG+I LS  LSNLIRLAVLYKYGG+Y+DTDF
Sbjct: 194 QATAPDLSFLVKGTPVEAWFRELRKGRKDPGEIPLSQNLSNLIRLAVLYKYGGIYIDTDF 253

Query: 188 IVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGH 247
           IVLK   GLRN+IG Q ++  ++ W  LNNA L+FD GH +L  F+ EFA TFDGN WGH
Sbjct: 254 IVLKPLTGLRNSIGAQSMNLDSKHWTRLNNAVLIFDIGHQLLHRFINEFALTFDGNKWGH 313

Query: 248 NGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRL 307
           NGPY+++RV +R+G    +N T+L   AFYPV+W +I   F KP T+EESKWV+  +L+L
Sbjct: 314 NGPYLVSRVIKRLGKRHDFNFTVLPPMAFYPVDWNKINGLFMKPKTQEESKWVEAKLLQL 373

Query: 308 SEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQ 344
             ++YG+HLWNK + +  I EGS++ RL   +CI+C+
Sbjct: 374 RRKTYGIHLWNKHSSRLTIEEGSIMGRLASDYCIMCE 410

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440658|ref|XP_002274455.1| PREDICTED: uncharacterized protein At4g19900-like [Vitis vinifera]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 177/349 (50%), Positives = 240/349 (68%)

Query: 1   PRNIEELEQEEQYGETPDPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLK 60
           P N  + E E  Y E      PP  + +E R+ WF+  LP+ E+F+ST L++ F  RV  
Sbjct: 68  PLNSVKEEVERDYSEDQRNFNPPINVTEEERIAWFRTVLPEFEIFKSTRLTQQFEGRVRS 127

Query: 61  FSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPL 120
           F   +C ++FFM W+SPA  F  R+F+A+++L KA+PH CL ++S +LD+R G +ILKPL
Sbjct: 128 FFNGKCEVRFFMTWISPAESFGRREFIAMDSLFKAHPHGCLTILSPTLDSRLGDRILKPL 187

Query: 121 LDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGG 180
            D  F++LAV PD + L KDTPAE W  ++K G +DPG+I L+  LSNL+RLAVLYKYGG
Sbjct: 188 QDREFRVLAVAPDASFLFKDTPAEAWFVEMKSGNKDPGEIPLAQNLSNLLRLAVLYKYGG 247

Query: 181 VYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTF 240
           VYLDTDFI+L  F  LRN IG Q +D  +  W  LNNA L+FDK HP+++ F++EFA TF
Sbjct: 248 VYLDTDFIILNKFSSLRNTIGAQSIDPVSGNWSRLNNAVLIFDKNHPLVYKFIEEFALTF 307

Query: 241 DGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWV 300
           DGN WGHNGPY+++RV  RV   PGYN T+L   AFYPV+W +I  +F +P  +  SKW+
Sbjct: 308 DGNKWGHNGPYLVSRVVNRVARRPGYNFTVLPPMAFYPVDWNRIGDYFPRPKDQVTSKWL 367

Query: 301 DETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQDSYDS 349
           +  +L+L +E+YG+HLWNK + K  I  GS+I RLI  HC +C+  Y S
Sbjct: 368 ETKLLQLGKEAYGVHLWNKQSSKLKIEPGSIIARLILDHCSICEHVYTS 416

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147853779|emb|CAN83821.1| hypothetical protein VITISV_030953 [Vitis vinifera]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 177/349 (50%), Positives = 239/349 (68%)

Query: 1   PRNIEELEQEEQYGETPDPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLK 60
           P N  + E E  Y E     IPP  + +E R+ WF+  LP+  +F+ST L++ F  RV  
Sbjct: 65  PLNSVKEEVERDYSEDQRNFIPPINVTEEERIAWFRTVLPEFXIFKSTRLTQQFEGRVRS 124

Query: 61  FSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPL 120
           F    C ++FFM W+SPA  F  R+F+A+++L KA+PH CL ++S +LD+R G +ILKPL
Sbjct: 125 FFNGXCEVRFFMTWISPAESFXRREFIAMDSLFKAHPHGCLXILSPTLDSRLGDRILKPL 184

Query: 121 LDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGG 180
            D  F++LAV PD + L KDTPAE W  ++K G +DPG+I L+  LSNL+RLAVLYKYGG
Sbjct: 185 QDREFRVLAVAPDASFLFKDTPAEAWFVEMKSGNKDPGEIPLAQNLSNLLRLAVLYKYGG 244

Query: 181 VYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTF 240
           VYLDTDFI+L  F  LRN IG Q +D  +  W  LNNA L+FDK HP+++ F++EFA TF
Sbjct: 245 VYLDTDFIILNKFSSLRNTIGAQSIDPVSGNWSRLNNAVLIFDKNHPLVYKFIEEFALTF 304

Query: 241 DGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWV 300
           DGN WGHNGPY+++RV  RV   PGYN T+L   AFYPV+W +I  +F +P  +  SKW+
Sbjct: 305 DGNKWGHNGPYLVSRVVNRVARRPGYNFTVLPPMAFYPVDWNRIGDYFPRPKDQVTSKWL 364

Query: 301 DETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQDSYDS 349
           +  +L+L +E+YG+HLWNK + K  I  GS+I RLI  HC +C+  Y S
Sbjct: 365 ETKLLQLGKEAYGVHLWNKQSSKLKIEPGSIIARLILDHCSICEHVYTS 413

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740224|emb|CBI30406.3| unnamed protein product [Vitis vinifera]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 177/349 (50%), Positives = 240/349 (68%)

Query: 1   PRNIEELEQEEQYGETPDPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLK 60
           P N  + E E  Y E      PP  + +E R+ WF+  LP+ E+F+ST L++ F  RV  
Sbjct: 147 PLNSVKEEVERDYSEDQRNFNPPINVTEEERIAWFRTVLPEFEIFKSTRLTQQFEGRVRS 206

Query: 61  FSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPL 120
           F   +C ++FFM W+SPA  F  R+F+A+++L KA+PH CL ++S +LD+R G +ILKPL
Sbjct: 207 FFNGKCEVRFFMTWISPAESFGRREFIAMDSLFKAHPHGCLTILSPTLDSRLGDRILKPL 266

Query: 121 LDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGG 180
            D  F++LAV PD + L KDTPAE W  ++K G +DPG+I L+  LSNL+RLAVLYKYGG
Sbjct: 267 QDREFRVLAVAPDASFLFKDTPAEAWFVEMKSGNKDPGEIPLAQNLSNLLRLAVLYKYGG 326

Query: 181 VYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTF 240
           VYLDTDFI+L  F  LRN IG Q +D  +  W  LNNA L+FDK HP+++ F++EFA TF
Sbjct: 327 VYLDTDFIILNKFSSLRNTIGAQSIDPVSGNWSRLNNAVLIFDKNHPLVYKFIEEFALTF 386

Query: 241 DGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWV 300
           DGN WGHNGPY+++RV  RV   PGYN T+L   AFYPV+W +I  +F +P  +  SKW+
Sbjct: 387 DGNKWGHNGPYLVSRVVNRVARRPGYNFTVLPPMAFYPVDWNRIGDYFPRPKDQVTSKWL 446

Query: 301 DETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQDSYDS 349
           +  +L+L +E+YG+HLWNK + K  I  GS+I RLI  HC +C+  Y S
Sbjct: 447 ETKLLQLGKEAYGVHLWNKQSSKLKIEPGSIIARLILDHCSICEHVYTS 495

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
TAIR|locus:2042897	405	AT2G38150 [Arabidopsis thalian	0.934	0.804	0.577	1e-107
TAIR|locus:2150104	407	AT5G01250 [Arabidopsis thalian	0.888	0.761	0.532	6.1e-94
TAIR|locus:2095264	411	AT3G09020 [Arabidopsis thalian	0.882	0.749	0.533	1.9e-92
TAIR|locus:4010713690	380	AT2G38152 [Arabidopsis thalian	0.828	0.760	0.520	3.9e-83
TAIR|locus:2206006	435	AT1G61050 [Arabidopsis thalian	0.914	0.733	0.436	8.4e-74
UNIPROTKB|G3MZ03	368	LOC618369 "Uncharacterized pro	0.659	0.625	0.308	1.7e-27
MGI|MGI:3512453	359	A4galt "alpha 1,4-galactosyltr	0.610	0.593	0.330	5.2e-26
RGD|621583	360	A4galt "alpha 1,4-galactosyltr	0.610	0.591	0.326	1.4e-25
UNIPROTKB|Q9NPC4	353	A4GALT "Lactosylceramide 4-alp	0.659	0.651	0.297	3.6e-25
UNIPROTKB|Q9N290	327	A4GALT "Lactosylceramide 4-alp	0.659	0.703	0.297	4.6e-25

TAIR|locus:2042897 AT2G38150 [Arabidopsis thaliana (taxid:3702)]

 Score = 1065 (380.0 bits), Expect = 1.0e-107, P = 1.0e-107
 Identities = 189/327 (57%), Positives = 246/327 (75%)

Query:    18 DPLIPPFWLKKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKFSTNQCAIQFFMVWLSP 77
             DPL+PP    K  R++WF++KLP+LE+ +ST  S++FH RVL      C+ QFFM+WLSP
Sbjct:    71 DPLLPPRKASKNQRIDWFRRKLPELEILKSTTKSKSFHTRVLDLYNKNCSAQFFMIWLSP 130

Query:    78 ARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASL 137
             A  F PR+ LA++TL   NP +CL ++S SLD+  GY ILKPL D GF ++AVT D+  L
Sbjct:   131 ANSFGPREMLAIDTLFTTNPGACLAILSNSLDSPNGYTILKPLFDQGFNLIAVTIDIPFL 190

Query:   138 VKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLR 197
             VK+TPAE WLK++K G  DPG I L + LS+L RLAVLYKYGGVYLDTD I L D  GLR
Sbjct:   191 VKNTPAEAWLKRLKSGNMDPGSIPLFMNLSDLTRLAVLYKYGGVYLDTDIIFLNDMTGLR 250

Query:   198 NAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVT 257
             NAIG Q  D AT++W  LNNA +VFD  HP++ +FLQE+ATTFDGN WG+N PY+++RV 
Sbjct:   251 NAIGAQSSDPATKRWTRLNNAVMVFDIYHPLMREFLQEYATTFDGNKWGYNSPYLVSRVI 310

Query:   258 RRVGNTPGYN-LTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHL 316
             +R+GN PGYN LTI   +AFYPVNW++I++ FKKPAT  E+KWV++TV  +++ SY +HL
Sbjct:   311 KRLGNKPGYNNLTIFSPDAFYPVNWIKIQKLFKKPATTREAKWVEKTVQDMNKGSYMIHL 370

Query:   317 WNKITRKFVINEGSVIHRLIKSHCILC 343
             WNK+TRK  I EGSV+H L+ +HC +C
Sbjct:   371 WNKVTRKIKIEEGSVMHTLVSTHCTVC 397

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005795 "Golgi stack" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2150104 AT5G01250 [Arabidopsis thaliana (taxid:3702)]

 Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
 Identities = 165/310 (53%), Positives = 223/310 (71%)

Query:    37 KKLPDLEVFQSTNLSRAFHDRVLKFSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKAN 96
             +KL  +EVF   NLS  F  RV +F  + C + F M W+SPA  F  R+ LA+E++ K++
Sbjct:    94 EKLQVIEVFSGDNLSDKFQKRVNEFVGDGCEVNFVMTWISPADFFGNREVLAIESVFKSH 153

Query:    97 PHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERD 156
             P+ CL+++S ++D+ +GY  LKP +D G+K+LAVTPDL  L+K T  E WL +IK G+RD
Sbjct:   154 PYGCLMILSATMDSPQGYATLKPFIDRGYKVLAVTPDLPFLLKGTAGELWLDEIKSGKRD 213

Query:   157 PGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLN 216
             PGKISL+  LSNL+RLA LYKYGGVYLDTD IVLK FKGLRN IG Q +D ++  W  LN
Sbjct:   214 PGKISLAQNLSNLMRLAYLYKYGGVYLDTDMIVLKSFKGLRNVIGAQTLDPSSTNWTRLN 273

Query:   217 NAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAF 276
             NA L+FDK HP+L  F++EFA TF+GN WG+NGPY+++RV R V  + GYN T++    F
Sbjct:   274 NAVLIFDKNHPLLLKFMEEFAKTFNGNIWGYNGPYLVSRVARAVEGSSGYNFTVMRPSVF 333

Query:   277 YPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLI 336
             Y VNW++IK+ FK P TE++SKWV   +L +    YGLHLWNK +RK+ I +GS + +L+
Sbjct:   334 YSVNWLEIKKLFKVPKTEKDSKWVKTKLLHMQRNGYGLHLWNKFSRKYEIEQGSAMWKLV 393

Query:   337 KSHCILCQDS 346
               HCI+C+ S
Sbjct:   394 SEHCIICEIS 403

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005795 "Golgi stack" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2095264 AT3G09020 [Arabidopsis thaliana (taxid:3702)]

 Score = 921 (329.3 bits), Expect = 1.9e-92, P = 1.9e-92
 Identities = 165/309 (53%), Positives = 226/309 (73%)

Query:    38 KLPDLEVFQSTNLSRAFHDRVLKFSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANP 97
             KL  LEVF   ++S  F  R  +F  + C ++F M W+SPA +F  R+ L+VE++ K++ 
Sbjct:    99 KLQVLEVFGGKDVSEKFQQRATEFLRDDCEVKFMMTWISPAELFGKREILSVESVFKSHA 158

Query:    98 HSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDP 157
               CL+++S ++D+ +G++ILKP LD G++++AVTPDL  L+KDT  E+WL++I+ G+RDP
Sbjct:   159 RGCLMILSSTMDSLQGFRILKPFLDRGYRVMAVTPDLPFLLKDTAGESWLEEIQTGKRDP 218

Query:   158 GKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNN 217
             GKISL+  LSNL+RLA L+K+GGVYLDTD IVLK FK LRN IG Q ++  +R W  LNN
Sbjct:   219 GKISLAQNLSNLMRLAYLFKFGGVYLDTDMIVLKSFKTLRNVIGAQTLEPVSRNWTRLNN 278

Query:   218 AALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFY 277
             A L+FDK HP L   ++EFA TF+GN WGHNGPY+++RV R V  T GYN TIL   AFY
Sbjct:   279 AVLIFDKNHPFLLKSIEEFALTFNGNVWGHNGPYLVSRVARAVEGTDGYNFTILTPPAFY 338

Query:   278 PVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIK 337
             PVNWV+I++ FK P TE++SK V   VL + + SYGLHLWNK +RKF I +GS + +L+ 
Sbjct:   339 PVNWVEIEKLFKVPRTEKDSKRVQVKVLEMQKRSYGLHLWNKFSRKFEIEQGSAMDKLVS 398

Query:   338 SHCILCQDS 346
             + CI+C DS
Sbjct:   399 NQCIIC-DS 406

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:4010713690 AT2G38152 [Arabidopsis thaliana (taxid:3702)]

 Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
 Identities = 152/292 (52%), Positives = 208/292 (71%)

Query:    56 DRV--LKFSTNQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRG 113
             DR+  L     +  ++FFM W SPA  F  R+ LAVE++ KA+P  CL+++S SLD+ +G
Sbjct:    85 DRIAWLHSHLTEFEVRFFMTWFSPAEYFGKREMLAVESVFKAHPQGCLMIVSGSLDSLQG 144

Query:   114 YKILKPLLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKISLSVQLSNLIRLA 173
               ILKPL D G+K+ A TPD++ L+++TPA++W +++K  +RDPG+I L   LSNL RLA
Sbjct:   145 DSILKPLNDRGYKVFAATPDMSLLLENTPAKSWFQEMKSCKRDPGRIPLHQNLSNLARLA 204

Query:   174 VLYKYGGVYLDTDFIVLKDFKGLRNAIGPQEVDQATRK-WKTLNNAALVFDKGHPILFDF 232
              LYKYGGVYLDTDFIV + FKGL+N+IG Q V +   K W  LNNA L+F+K HP+++ F
Sbjct:   205 FLYKYGGVYLDTDFIVTRSFKGLKNSIGAQTVVEGDSKNWTRLNNAVLIFEKDHPLVYSF 264

Query:   233 LQEFATTFDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPA 292
             ++EFA+TFDGN WGHNGPY++TRV +R   T G N T+L   AFYP NW+ I R F+ P 
Sbjct:   265 IEEFASTFDGNKWGHNGPYLVTRVAQRARETIGDNFTVLPPVAFYPFNWLDIPRLFQTPR 324

Query:   293 TEEESKWVDETVLRLSEESYGLHLWNKITRKFVINEGSVIHRLIKSHCILCQ 344
                +S  +   +++L+ ESYGLHLWNKITRK  I +GSVI  +I  HC++C+
Sbjct:   325 GSNDSTLLKTDLVKLNRESYGLHLWNKITRKLKIGKGSVIDIIISDHCVVCR 376

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005795 "Golgi stack" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

TAIR|locus:2206006 AT1G61050 [Arabidopsis thaliana (taxid:3702)]

 Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
 Identities = 141/323 (43%), Positives = 196/323 (60%)

Query:    27 KKEGRMEWFQKKLPDLEVFQSTNLSRAFHDRVLKF-STNQCAIQFFMVWLSPARIFRPRD 85
             KK  R +   +  P +         + F  RV    S + C   FFM W+S    F  R+
Sbjct:   109 KKTRRFKRSTELTPAITQRLQVKSRQRFQTRVKSLLSKSSCESLFFMTWISSIESFGDRE 168

Query:    86 FLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAET 145
                +E+L K +P+ CL+L+S S D  RG  ILKP  D G K+L + PD A + KDT AE 
Sbjct:   169 RFTIESLFKFHPNGCLILVSNSFDCDRGTLILKPFTDKGLKVLPIKPDFAYIFKDTSAEK 228

Query:   146 WLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQEV 205
             W +++K G   PG I L   LSNL+RL +LYKYGG+YLDTD I+LK    L N IG Q V
Sbjct:   229 WFERLKKGTLSPGVIPLEQNLSNLLRLVLLYKYGGIYLDTDVIILKSLSNLHNVIGAQTV 288

Query:   206 DQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRV-TR-RVGNT 263
             D  T+KW  LNNA L+FDK HP+L  F+ EF+ TF+GN WGHNGPY+++RV TR ++ ++
Sbjct:   289 DPVTKKWSRLNNAVLIFDKNHPLLKRFIDEFSRTFNGNKWGHNGPYLVSRVITRIKISSS 348

Query:   264 PGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLWNKITRK 323
                  ++L   AFYPV+W +IK F++ P T E   W+ + +  L + ++ +HLWN+ ++K
Sbjct:   349 SDLGFSVLPPSAFYPVDWTRIKGFYRAP-TNESDAWLRKRLTHLRKNTFAVHLWNRESKK 407

Query:   324 FVINEGSVIHRLIKSHCILCQDS 346
               I EGS+IH+L+   CI C  S
Sbjct:   408 LRIEEGSIIHQLMSHSCIFCNSS 430

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005795 "Golgi stack" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

UNIPROTKB|G3MZ03 LOC618369 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 83/269 (30%), Positives = 142/269 (52%)

Query:    88 AVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTP-------DLASLVKD 140
             +VE+  +A+P S +V++ + L    G    +P   LG  +L   P       DL  L +D
Sbjct:   112 SVESAARAHPESPVVVLMKGLP---GGNASRPR-HLGLSLLGCFPNVQMRPLDLGELFRD 167

Query:   141 TPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAI 200
             TP   W   ++    +P  + +   LS+  R+A+L+K+GG+YLDTDFIVLKD + L NA+
Sbjct:   168 TPLAAWYAAVQR-RWEPYLLPV---LSDASRIALLWKFGGIYLDTDFIVLKDLRNLTNAL 223

Query:   201 GPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRV 260
             G Q       ++  LN A L F++ H  +   +++F T ++G  WGH GP +LTRV ++ 
Sbjct:   224 GTQS------RY-VLNGAFLAFEQHHEFMAQCMRDFVTHYNGWIWGHQGPQLLTRVFKKW 276

Query:   261 GNTPGYN-------LTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYG 313
              +    +       +T L  EAFYP+ W   K++F+  + +E        + RL   ++ 
Sbjct:   277 CSIRSLSESRACRGVTTLPPEAFYPIPWQNWKKYFEDISPQE--------LTRLLNATFA 328

Query:   314 LHLWNKITR--KFVINEGSVIHRLIKSHC 340
             +H+WNK ++  +F     +++ +L   +C
Sbjct:   329 VHVWNKKSQGTRFEATSKALLAQLHARYC 357

GO:0016020 "membrane" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0007009 "plasma membrane organization" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

MGI|MGI:3512453 A4galt "alpha 1,4-galactosyltransferase" [Mus musculus (taxid:10090)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 80/242 (33%), Positives = 129/242 (53%)

Query:    88 AVETLMKANPHSCLVLISRSL--DTRRGYKILKPLLDLGFKILAVTP-DLASLVKDTPAE 144
             +VE+  +A+P S +V++ + L  DT    + L   L   F  + + P DL  L +DTP  
Sbjct:   103 SVESAARAHPESQVVVLMKGLPRDTTAQPRNLGISLLSCFPNVWIRPLDLQELFEDTPLA 162

Query:   145 TWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQE 204
              W  + +    +P ++ +   LS+  R+A+L+K+GG+YLDTDFIVLK+   L N +G Q 
Sbjct:   163 AWYSEARH-RWEPYQLPV---LSDASRIALLWKFGGIYLDTDFIVLKNLLNLTNTLGIQS 218

Query:   205 VDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTP 264
                   ++  LN A L F++ H  L   L +F   ++G  WGH GP +LTRV ++  +  
Sbjct:   219 ------RY-VLNGAFLAFERKHEFLALCLHDFVANYNGWIWGHQGPQLLTRVFKKWCSIQ 271

Query:   265 GYN-------LTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLW 317
                       +T L  EAFYP+ W   K++F+  + EE ++ ++ T        Y +H+W
Sbjct:   272 SLEKSHACRGVTALPPEAFYPIPWQNWKKYFEDISPEELTQLLNAT--------YAVHVW 323

Query:   318 NK 319
             NK
Sbjct:   324 NK 325

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0007009 "plasma membrane organization" evidence=ISO

GO:0008152 "metabolic process" evidence=ISO

GO:0008378 "galactosyltransferase activity" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0050512 "lactosylceramide 4-alpha-galactosyltransferase activity" evidence=IEA

RGD|621583 A4galt "alpha 1,4-galactosyltransferase" [Rattus norvegicus (taxid:10116)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 79/242 (32%), Positives = 130/242 (53%)

Query:    88 AVETLMKANPHSCLVLISRSL--DTRRGYKILKPLLDLGFKILAVTP-DLASLVKDTPAE 144
             +VE+  +A+P S +V++ + L  DT    + L   L   F  + + P DL  L +DTP  
Sbjct:   104 SVESAARAHPESQVVVLMKGLPRDTTAWPRNLGISLLSCFPNVQIRPLDLQELFEDTPLA 163

Query:   145 TWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQE 204
              W  + +    +P  + +   LS+  R+A+L+K+GG+YLDTDFIVLK+ + L N +G Q 
Sbjct:   164 AWYLEAQH-RWEPYLLPV---LSDASRIALLWKFGGIYLDTDFIVLKNLRNLTNMLGIQS 219

Query:   205 VDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTP 264
                   ++  LN A L F++ H  L   +++F   ++G  WGH GP +LTRV ++  +  
Sbjct:   220 ------RY-VLNGAFLAFERKHEFLALCIRDFVAHYNGWIWGHQGPQLLTRVFKKWCSIH 272

Query:   265 GYN-------LTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLW 317
                       +T L  EAFYP+ W   K++F+  + EE ++ ++ T        Y +H+W
Sbjct:   273 SLKESRACRGVTALPPEAFYPIPWQNWKKYFEDVSPEELAQLLNAT--------YAVHVW 324

Query:   318 NK 319
             NK
Sbjct:   325 NK 326

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0007009 "plasma membrane organization" evidence=IEA;ISO

GO:0008378 "galactosyltransferase activity" evidence=ISO;ISS;IDA

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0050512 "lactosylceramide 4-alpha-galactosyltransferase activity" evidence=IEA

UNIPROTKB|Q9NPC4 A4GALT "Lactosylceramide 4-alpha-galactosyltransferase" [Homo sapiens (taxid:9606)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 80/269 (29%), Positives = 138/269 (51%)

Query:    88 AVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTP-------DLASLVKD 140
             +VE+  + +P S ++++ + L    G     P   LG  +L+  P       DL  L +D
Sbjct:    97 SVESAARTHPESHVLVLMKGLP---GGNASLPR-HLGISLLSCFPNVQMLPLDLRELFRD 152

Query:   141 TPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAI 200
             TP   W   ++ G  +P  + +   LS+  R+A+++K+GG+YLDTDFIVLK+ + L N +
Sbjct:   153 TPLADWYAAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVL 208

Query:   201 GPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRR- 259
             G Q       ++  LN A L F++ H  +   +++F   ++G  WGH GP +LTRV ++ 
Sbjct:   209 GTQS------RY-VLNGAFLAFERRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKW 261

Query:   260 ------VGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYG 313
                     +     +T L  EAFYP+ W   K++F+    EE        + RL   +Y 
Sbjct:   262 CSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYFEDINPEE--------LPRLLSATYA 313

Query:   314 LHLWNKITR--KFVINEGSVIHRLIKSHC 340
             +H+WNK ++  +F     +++ +L   +C
Sbjct:   314 VHVWNKKSQGTRFEATSRALLAQLHARYC 342

GO:0005795 "Golgi stack" evidence=IEA

GO:0050512 "lactosylceramide 4-alpha-galactosyltransferase activity" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IDA

GO:0030173 "integral to Golgi membrane" evidence=NAS

GO:0006688 "glycosphingolipid biosynthetic process" evidence=NAS

GO:0007009 "plasma membrane organization" evidence=IDA

GO:0016020 "membrane" evidence=IDA

UNIPROTKB|Q9N290 A4GALT "Lactosylceramide 4-alpha-galactosyltransferase" [Gorilla gorilla gorilla (taxid:9595)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 80/269 (29%), Positives = 137/269 (50%)

Query:    88 AVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTP-------DLASLVKD 140
             +VE+  + +P S ++++ + L    G     P   LG  +L+  P       DL  L +D
Sbjct:    71 SVESAARTHPESHVLVLMKGLP---GGNASLPR-HLGISLLSCFPNVQMLPLDLRELFRD 126

Query:   141 TPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAI 200
             TP   W   ++ G  +P  + +   LS+  R+A+++K+GG+YLDTDFIVLK+ + L N +
Sbjct:   127 TPLADWYAAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVL 182

Query:   201 GPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRR- 259
             G Q       ++  LN A L F++ H  +   + +F   ++G  WGH GP +LTRV ++ 
Sbjct:   183 GTQS------RY-VLNGAFLAFERXHEFMALCMXDFVDHYNGWIWGHQGPQLLTRVFKKW 235

Query:   260 ------VGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYG 313
                     +     +T L  EAFYP+ W   K++F+    EE        + RL   +Y 
Sbjct:   236 CSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYFEDINPEE--------LPRLFSATYA 287

Query:   314 LHLWNKITR--KFVINEGSVIHRLIKSHC 340
             +H+WNK ++  +F     +++ +L   +C
Sbjct:   288 VHVWNKKSQGTRFEATSRALLAQLHARYC 316

GO:0008378 "galactosyltransferase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: Al_scaffold_0004_2376 annotation not avaliable (750 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	349
pfam04572	135	pfam04572, Gb3_synth, Alpha 1,4-glycosyltransferas	1e-41
pfam04488	93	pfam04488, Gly_transf_sug, Glycosyltransferase sug	4e-17

>gnl|CDD|146960 pfam04572, Gb3_synth, Alpha 1,4-glycosyltransferase conserved region

 Score =  141 bits (358), Expect = 1e-41
 Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 19/135 (14%)

Query: 220 LVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTP---------GYNLTI 270
           + F+  HP+    L++FA  F+GN WGHNGP ++TRV R+  NT              T+
Sbjct: 1   MNFEPHHPLAEMCLRDFAANFNGNKWGHNGPGLVTRVLRKWCNTGDFAGMTRLRCGGFTV 60

Query: 271 LGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLWNKITRKFVINEGS 330
           L  +AFYP+ W Q K+FF++P  EE   WV        +ESY +HLWNK ++   + EGS
Sbjct: 61  LPPDAFYPIPWPQWKKFFEEPRLEETMNWV--------KESYAVHLWNKASKGLKVEEGS 112

Query: 331 --VIHRLIKSHCILC 343
                 L + HC   
Sbjct: 113 RVAYGTLAEQHCPRV 127

The glycosphingolipids (GSL) form part of eukaryotic cell membranes. They consist of a hydrophilic carbohydrate moiety linked to a hydrophobic ceramide tail embedded within the lipid bilayer of the membrane. Lactosylceramide, Gal1,4Glc1Cer (LacCer), is the common synthetic precursor to the majority of GSL found in vertebrates. Alpha 1.4-glycosyltransferases utilise UDP donors and transfer the sugar to a beta-linked acceptor. This region appears to be confined to higher eukaryotes. No function has been yet assigned to this region. Length = 135

>gnl|CDD|218109 pfam04488, Gly_transf_sug, Glycosyltransferase sugar-binding region containing DXD motif

 Score = 75.1 bits (185), Expect = 4e-17
 Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 33/121 (27%)

Query: 84  RDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPA 143
           R+  A+E+L+  +P  C+V+++  L                        D+  L  DTP 
Sbjct: 3   REMKAIESLISLHPDYCVVVLNDDL--------------------DKILDINFLKSDTP- 41

Query: 144 ETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQ 203
             W  +          + L    S+L+R A+LYKYGG+YLDTD I LK      N+IG Q
Sbjct: 42  --WFLEAYS------LLPLFAAKSDLLRYAILYKYGGIYLDTDVIPLKSL----NSIGAQ 89

Query: 204 E 204
           E
Sbjct: 90  E 90

The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases. Length = 93

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	349
KOG1928	409	consensus Alpha-1,4-N-acetylglucosaminyltransferas	100.0
PF04572	135	Gb3_synth: Alpha 1,4-glycosyltransferase conserved	99.95
PF05704	276	Caps_synth: Capsular polysaccharide synthesis prot	99.84
PF04488	103	Gly_transf_sug: Glycosyltransferase sugar-binding	99.83
COG3774	347	OCH1 Mannosyltransferase OCH1 and related enzymes	99.77
PF12919	514	TcdA_TcdB: TcdA/TcdB catalytic glycosyltransferase	98.74
PRK15382	326	non-LEE encoded effector protein NleB; Provisional	94.84
PRK15383	335	type III secretion system protein; Provisional	94.72
PRK15384	336	type III secretion system protein; Provisional	94.48
cd06914	278	GT8_GNT1 GNT1 is a fungal enzyme that belongs to t	91.4
cd02537	240	GT8_Glycogenin Glycogenin belongs the GT 8 family	91.03
PRK15171	334	lipopolysaccharide 1,3-galactosyltransferase; Prov	90.89
cd06432	248	GT8_HUGT1_C_like The C-terminal domain of HUGT1-li	90.56
cd04194	248	GT8_A4GalT_like A4GalT_like proteins catalyze the	89.98
cd06429	257	GT8_like_1 GT8_like_1 represents a subfamily of GT	87.53
PF01501	250	Glyco_transf_8: Glycosyl transferase family 8; Int	85.61
cd06431	280	GT8_LARGE_C LARGE catalytic domain has closest hom	84.2
PLN00176	333	galactinol synthase	81.49

>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.9e-72  Score=533.66  Aligned_cols=343  Identities=48%  Similarity=0.850  Sum_probs=316.7

Q ss_pred             ChhHHHhhhhhCCCCCCCCC-ccccCcccchhhhc--cCCCceeEeccCcccHHHHHHHhhhccCCcceeEEEEecCCCC
Q 042952            3 NIEELEQEEQYGETPDPLIP-PFWLKKEGRMEWFQ--KKLPDLEVFQSTNLSRAFHDRVLKFSTNQCAIQFFMVWLSPAR   79 (349)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~I~~~W~sg~~   79 (349)
                      +|..|..+..-+.+...+.+ +..+..++++-|++  ..+++++++.|...++.|+.++..++...|+.+|+|+|+|+..
T Consensus        61 ~i~~~~~~~~~~~e~~~~~~~~~~~~~~q~~~~~~e~~~l~e~~~~~s~~~~~sf~~~~~~~~~~~c~~~~fm~w~S~~~  140 (409)
T KOG1928|consen   61 EILSVVPSLPVSNEFELLFSVGRSLSLKQKTTVNGEKIELQELENLSSELKSPSFQSRVNSFFRKECSVRFFMTWISPAE  140 (409)
T ss_pred             EeccccccccccchhhhhcchhhhhhheeeeeeccccchhhheeeccccccCcccCCCcchhhccCCceeEEEEeccccc
Confidence            34445555555555556555 78888999999999  7799999999999999999999999998899999999999999


Q ss_pred             CCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCccccccchhhhhccccEEEeCCChhhhhcCCchHHHHHhhhcCCCCCCC
Q 042952           80 IFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGK  159 (349)
Q Consensus        80 ~l~~r~~~aIeS~~r~nP~~~V~v~s~~~~~~~g~~~l~~~~~~~~nV~~~~~d~~~~f~~tP~~~w~~~~~~g~~~~~~  159 (349)
                      .++.|++||||||+++||++||+|+++++++.+|..++++|.+.|+++..+.+|+..++++||.+.|...++.|+.++|+
T Consensus       141 ~f~~r~~~sIESa~k~hP~~cv~vls~t~ds~~~~s~~kp~~~~~lsv~~v~~~lp~llk~t~~e~~l~~~k~g~~~~~~  220 (409)
T KOG1928|consen  141 SFGVREMCSIESAFKTHPEGCVVVLSKTMDSPNGYSILKPFLDSGLSVIAVTPDLPFLLKDTPGETWLERWKDGRLDPGK  220 (409)
T ss_pred             CCChhhhhhhHHHHhhCCCceEEEEEccccCCCCccccccHhHhhhhhcccccCchhhHhhCccccHHHHHHhcccCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccchhhhHhHHHHHHHHHcCcEEEeCCceecccchhhhccccccccccccCCccccccceEEecCCCHHHHHHHHHHHHh
Q 042952          160 ISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATT  239 (349)
Q Consensus       160 ~~~~a~~SD~~R~~lLyk~GGiYlD~Dv~~lkpl~~l~~~~g~e~~~~~~~~~~~l~n~v~~~~~~hp~l~~~l~~~~~~  239 (349)
                      +++.++.||+.||++||||||||||+||+++|++..+.|.+|...   ....|..+|||+|++.++|||+.+||+++..+
T Consensus       221 ~~l~~~lSdl~RLA~LyKYGGvYLDTDvIvLksl~~l~N~ig~~~---~~~~~~~lnnavl~F~k~Hpfl~~cl~eF~~t  297 (409)
T KOG1928|consen  221 IPLLQNLSDLSRLALLYKYGGVYLDTDVIVLKSLSNLRNVIGVDP---ATQAWTRLNNAVLIFDKNHPFLLECLREFALT  297 (409)
T ss_pred             ccchhhHHHHHHHHHHHHhCCEEeeccEEEecccccccccccccc---hhhHHHhhcCceeecCCCCHHHHHHHHHHHHh
Confidence            998888999999999999999999999999999999999999322   23467899999999999999999999999999


Q ss_pred             cCCCccCccccHHHHHHHHHHhCCCCCceEEccCCccccCCchhhHhhccCCcchhhhhhHHHHHhhcCCCcEEEEeeCC
Q 042952          240 FDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLWNK  319 (349)
Q Consensus       240 ~~~~~w~~tGP~llt~v~~~~~~~~~~~i~ilP~~~FyPi~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~sy~iHlwn~  319 (349)
                      |++++||++||.++|||++++|+..+.+++|.|+.+|||++|.++..||.-|..+-++.|+.++...+.++||++|+||+
T Consensus       298 fNg~~WG~NGP~LvTRVakr~c~~~~~~~~i~~p~~f~~vn~~~i~~fy~iP~~ew~~~~~~~~~~~~~k~Sy~vHlWNk  377 (409)
T KOG1928|consen  298 YNGNIWGHNGPYLVTRVAKRWCNTKNYNLTILPPSAFYPVNWLEIQAFYAIPWTEWDRKFVDEETLKMLKNSYAVHLWNK  377 (409)
T ss_pred             ccccccccCCcHHHHHHHHHHhCCCCccceecCccccCceeeeccccccccchhHhhhhhhHHHHHHHhccCeEEEeeec
Confidence            99999999999999999999999888889999999999999999999999998887888877788889999999999999


Q ss_pred             cccccccCCCCHHHHHHHhcCCCcccccC
Q 042952          320 ITRKFVINEGSVIHRLIKSHCILCQDSYD  348 (349)
Q Consensus       320 ~~~~~~i~~gS~~~~L~~~~cp~~~~~~~  348 (349)
                      .+++++|+.||+|++|+++|||+|.+++.
T Consensus       378 ~S~k~~ie~gS~~~~L~s~~Cp~~~~~s~  406 (409)
T KOG1928|consen  378 FSRKLKIEEGSAVAKLVSKHCPRCYSATG  406 (409)
T ss_pred             cccccccccchHHHHHHHhcCCcccchhh
Confidence            99999999999999999999999998653

>PF04572 Gb3_synth: Alpha 1,4-glycosyltransferase conserved region; InterPro: IPR007652 The glycosphingolipids (GSL) form part of eukaryotic cell membranes

Probab=99.95  E-value=1.3e-28  Score=210.62  Aligned_cols=119  Identities=44%  Similarity=0.898  Sum_probs=107.0

Q ss_pred             EEecCCCHHHHHHHHHHHHhcCCCccCccccHHHHHHHHHHhCCC---------CCceEEccCCccccCCchhhHhhccC
Q 042952          220 LVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTP---------GYNLTILGLEAFYPVNWVQIKRFFKK  290 (349)
Q Consensus       220 ~~~~~~hp~l~~~l~~~~~~~~~~~w~~tGP~llt~v~~~~~~~~---------~~~i~ilP~~~FyPi~~~~~~~~f~~  290 (349)
                      |+++++|||++.+|+++..+|+++.|+++||.++|||++++|...         +.+++|+|+++||||+|.+|+.||++
T Consensus         1 m~F~~~H~~~~~~l~df~~~Y~~~~w~~nGP~lltRVl~~~C~~~~~~~~~~~~C~~~~vlp~~~FYPI~~~~~~~~F~~   80 (135)
T PF04572_consen    1 MAFDKGHPFLWECLEDFVKNYDGNKWGHNGPDLLTRVLKKFCNTENFKDMEDNRCRGFSVLPPEAFYPIPYQDWKRFFEP   80 (135)
T ss_pred             CCCCCCCHHHHHHHHHHHHHcCcchhcccCcHHHHHHHHHHhcCCCccccccccCCCeEEcCccceeccChhHhHHHhcC
Confidence            678999999999999999999999999999999999999998752         24799999999999999999999998


Q ss_pred             CcchhhhhhHHHHHhhcCCCcEEEEeeCCcccccccCCCC--HHHHHHHhcCCCcccc
Q 042952          291 PATEEESKWVDETVLRLSEESYGLHLWNKITRKFVINEGS--VIHRLIKSHCILCQDS  346 (349)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~sy~iHlwn~~~~~~~i~~gS--~~~~L~~~~cp~~~~~  346 (349)
                      +..+...++        ..+||+||+||+++++.++++||  +|++||++|||+|.+.
T Consensus        81 ~~~~~~~~~--------~~~Sy~vHlWN~~s~~~~i~~~S~~~y~~La~~~CP~~~~~  130 (135)
T PF04572_consen   81 PSTEEVMEW--------LKNSYAVHLWNKMSSGLPIEPGSNTLYAKLARQHCPRTYAA  130 (135)
T ss_pred             CcchHHHHH--------hhCceEEEecccccCCccccCCcHHHHHHHHHHhChHHHHH
Confidence            876543332        34899999999999999999999  9999999999999764

They consist of a hydrophilic carbohydrate moiety linked to a hydrophobic ceramide tail embedded within the lipid bilayer of the membrane. Lactosylceramide, Gal1,4Glc1Cer (LacCer), is the common synthetic precursor to the majority of GSL found in vertebrates. Alpha 1.4-glycosyltransferases utilise UDP donors and transfer the sugar to a beta-linked acceptor []. No function has been yet assigned to this domain ; GO: 0008378 galactosyltransferase activity, 0005795 Golgi stack

>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins

Probab=99.84  E-value=1.9e-20  Score=178.12  Aligned_cols=143  Identities=21%  Similarity=0.361  Sum_probs=105.3

Q ss_pred             CcceeEEEEecCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCccccccchhhhhccccEEEeCCChhhhhcCCchH
Q 042952           65 QCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAE  144 (349)
Q Consensus        65 ~~~~~I~~~W~sg~~~l~~r~~~aIeS~~r~nP~~~V~v~s~~~~~~~g~~~l~~~~~~~~nV~~~~~d~~~~f~~tP~~  144 (349)
                      ..++.||++|.+|.+++|+.++.||+|+.+.+|+++|++++..  +      ++.++           ++       |..
T Consensus        43 ~~~k~IW~~W~QG~e~aP~~Vk~ci~s~~k~~~~~~Vi~lt~~--N------i~~Yv-----------~~-------P~~   96 (276)
T PF05704_consen   43 TNEKIIWVCWWQGEENAPEIVKKCINSWRKNAPDYEVILLTED--N------IKDYV-----------DI-------PDF   96 (276)
T ss_pred             CCCCcEEEEECCCccccCHHHHHHHHHHHHHCCCCeEEEEChH--H------HHHHc-----------CC-------chh
Confidence            4577899999999999999999999999999999999999752  1      23332           11       311


Q ss_pred             HHHHhhhcCCCCCCCccchhhhHhHHHHHHHHHcCcEEEeCCceecccchhhh---ccccccccccc--cCCccccccce
Q 042952          145 TWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLR---NAIGPQEVDQA--TRKWKTLNNAA  219 (349)
Q Consensus       145 ~w~~~~~~g~~~~~~~~~~a~~SD~~R~~lLyk~GGiYlD~Dv~~lkpl~~l~---~~~g~e~~~~~--~~~~~~l~n~v  219 (349)
                      . .+.     +..|.++ .||+||++|+.+|++|||+|+|++++|.+|++.+.   .++.+......  ........|.+
T Consensus        97 i-~~k-----~~~g~i~-~a~~SDilR~~LL~~yGGvWiDatv~~t~~l~~~~~~~~ff~~~~~~~~~~~~~~~~w~~~f  169 (276)
T PF05704_consen   97 I-LEK-----YEKGKIS-PAHFSDILRLALLYKYGGVWIDATVYLTKPLDDEIFDSDFFSFSRPDKDYNPISISSWTNFF  169 (276)
T ss_pred             H-HHH-----HHcCCCc-hhHHHHHHHHHHHHHcCcEEeCCceEECCchhHHHhcCCeeEEeccCcCcccchHHHhHhhh
Confidence            1 111     2234454 48999999999999999999999999999999764   24444221110  11122345569


Q ss_pred             EEecCCCHHHHHHHHHHHHhc
Q 042952          220 LVFDKGHPILFDFLQEFATTF  240 (349)
Q Consensus       220 ~~~~~~hp~l~~~l~~~~~~~  240 (349)
                      |++++|||++..+.+.+.+-.
T Consensus       170 i~a~~~n~~~~~~~~~~~~yw  190 (276)
T PF05704_consen  170 IAAKKGNPFIKFWRDLLLEYW  190 (276)
T ss_pred             eeECCCCHHHHHHHHHHHHHH
Confidence            999999999999999988643

Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].

>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif

Probab=99.83  E-value=1.4e-20  Score=153.41  Aligned_cols=96  Identities=30%  Similarity=0.541  Sum_probs=76.3

Q ss_pred             CHHHHHHHHHHHHHCCCCeEEEEeCCCCCccccccchhhhhccccEEEeCCChhhhhcCCchHHHHHhhhcCCCCCCCcc
Q 042952           82 RPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKIS  161 (349)
Q Consensus        82 ~~r~~~aIeS~~r~nP~~~V~v~s~~~~~~~g~~~l~~~~~~~~nV~~~~~d~~~~f~~tP~~~w~~~~~~g~~~~~~~~  161 (349)
                      |.+++|+||||+++||++++++|++...                |+.+..+|+..++.++|   |+..... +++.+..+
T Consensus         1 P~~~~~~i~s~~~~nP~~~~~~~~d~~~----------------~~~~~~~~~~~l~~~~~---~~~~~~~-~~~~~~~~   60 (103)
T PF04488_consen    1 PERFQCSIESWARHNPDYEYILWTDESD----------------NVRVKRIDIEFLFEKTP---WFLELYN-KWEPGRYP   60 (103)
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCc----------------chhhhHHHHHHHHhCCh---HHHHHHh-hhhccccc
Confidence            6799999999999999999999987522                34455667888888887   4433332 23334445


Q ss_pred             chhhhHhHHHHHHHHHcCcEEEeCCceecccc-hhhh
Q 042952          162 LSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDF-KGLR  197 (349)
Q Consensus       162 ~~a~~SD~~R~~lLyk~GGiYlD~Dv~~lkpl-~~l~  197 (349)
                      ..+++||++||++||+|||||+|+|++|+||+ +.+.
T Consensus        61 ~~~~~sD~~R~~~L~~~GGiY~D~D~~~~rpl~~~~~   97 (103)
T PF04488_consen   61 NYAHKSDLLRYLVLYKYGGIYLDLDVICLRPLDDPWL   97 (103)
T ss_pred             chHHHHHHHHHHHHHHcCcEEEeCccccCcchhhhhh
Confidence            57899999999999999999999999999999 7664

The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].

>COG3774 OCH1 Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane]

Probab=99.77  E-value=7.2e-19  Score=170.06  Aligned_cols=191  Identities=18%  Similarity=0.279  Sum_probs=140.1

Q ss_pred             CcceeEEEEecCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCccccccchhhhhccccEEEeCCChhhhhcCCchH
Q 042952           65 QCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPAE  144 (349)
Q Consensus        65 ~~~~~I~~~W~sg~~~l~~r~~~aIeS~~r~nP~~~V~v~s~~~~~~~g~~~l~~~~~~~~nV~~~~~d~~~~f~~tP~~  144 (349)
                      .+.+.||++|.+..  +|+...-+.++++.+|||++..+|++.+.        .++++..                   .
T Consensus        81 ~IPk~IwQTw~~~~--~P~~~~~~~~~~~~~~PdY~yi~~tD~~~--------~~~v~h~-------------------~  131 (347)
T COG3774          81 AIPKIIWQTWSNEK--FPEYVNKLFNRWRSLHPDYRYILWTDEMR--------EPLVEHD-------------------Y  131 (347)
T ss_pred             hHHHHHHHHhcCCC--CCHHHHHHHHHHHhcCCCeEEEecchhhh--------hHHHhhc-------------------c
Confidence            46788999998876  99999999999999999999999887422        2232211                   1


Q ss_pred             HHHHhhhcCCCCCCCccchhhhHhHHHHHHHHHcCcEEEeCCceecccchhhh-c---cccccccccccCCccccccceE
Q 042952          145 TWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLR-N---AIGPQEVDQATRKWKTLNNAAL  220 (349)
Q Consensus       145 ~w~~~~~~g~~~~~~~~~~a~~SD~~R~~lLyk~GGiYlD~Dv~~lkpl~~l~-~---~~g~e~~~~~~~~~~~l~n~v~  220 (349)
                      .|+-...    .  .+|..+.++|++||.+|++|||||+|+|+-|+++++.++ +   ++..+.       ...++|.+|
T Consensus       132 ~~~~~ay----~--~yp~~~~raD~~RYfvL~~~GGIY~DiD~~~~~~id~~l~~~~~~l~~~~-------~~~v~n~~m  198 (347)
T COG3774         132 PWFLDAY----R--RYPYGALRADFWRYFVLYHYGGIYLDIDTGLVKPIDPLLDDAEAWLRRTI-------PLGVGNGVM  198 (347)
T ss_pred             HHHHHHH----H--ccCcchhhhhhHhheeeeccCcEEEeCCcccccCCcccccchHHHhhhcC-------CCcccchhh
Confidence            2332221    1  235568999999999999999999999999999999987 3   233322       257899999


Q ss_pred             EecCCCHHHHHHHHHHHHhc--C---CCccCccccHHHHHHHHHHhCCCCCceEEccCCccccCCchhhHhhccCCcchh
Q 042952          221 VFDKGHPILFDFLQEFATTF--D---GNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEE  295 (349)
Q Consensus       221 ~~~~~hp~l~~~l~~~~~~~--~---~~~w~~tGP~llt~v~~~~~~~~~~~i~ilP~~~FyPi~~~~~~~~f~~~~~~~  295 (349)
                      ++.|+||+++.+++.+....  .   ..++..|||.+++.+.+++...       .|+..|..+.-.+ ..+        
T Consensus       199 ~s~p~hp~~~~~i~~~~~~~~~~~p~~ti~~stGp~iL~~i~~~~~~~-------~~~~~~~~~~~~~-~~~--------  262 (347)
T COG3774         199 GSAPGHPFLKKMIERLPYNIIWKFPYWTIQASTGPLILSEIHSAYTVQ-------TPPASFDAVNLSD-PAF--------  262 (347)
T ss_pred             ccCCCCchHHHHHHHhhhccccCCCceeeecCCCChhHHHHHHHhhcc-------CCccccceeEecc-hhh--------
Confidence            99999999999999998221  1   1345689999999999988543       2666666655432 011        


Q ss_pred             hhhhHHHHHhhcCCCcEEEEeeCCccc
Q 042952          296 ESKWVDETVLRLSEESYGLHLWNKITR  322 (349)
Q Consensus       296 ~~~~~~~~~~~~~~~sy~iHlwn~~~~  322 (349)
                              ....+ ++|..|.+.++|.
T Consensus       263 --------~~~~~-~~~~~~~~g~~W~  280 (347)
T COG3774         263 --------TNKRN-NQYFLHTGGSSWT  280 (347)
T ss_pred             --------hhhcc-ceEEEeecCCccc
Confidence                    12233 7999999999884

>PF12919 TcdA_TcdB: TcdA/TcdB catalytic glycosyltransferase domain; InterPro: IPR024770 Toxins A (TcdA) and B (TcdB) of Clostridium difficile belong to the family of clostridial glucosylating toxins

Probab=98.74  E-value=3.3e-08  Score=100.97  Aligned_cols=39  Identities=18%  Similarity=0.208  Sum_probs=30.2

Q ss_pred             ceeEEEEecCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 042952           67 AIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRS  107 (349)
Q Consensus        67 ~~~I~~~W~sg~~~l~~r~~~aIeS~~r~nP~~~V~v~s~~  107 (349)
                      +|+|||+|.+|.  +|..|.-.|..|...|||+++.+|.++
T Consensus         1 eK~iH~iWigG~--~~~~~~~Yik~w~~~n~dy~~~lW~D~   39 (514)
T PF12919_consen    1 EKNIHFIWIGGA--PPDIQRDYIKTWKDTNPDYTINLWYDS   39 (514)
T ss_dssp             -SEEEEE--SS-----HHHHHHHHHHHHHTTTSEEEEEE-T
T ss_pred             CCeEEEEEeCCC--CchhHHHHHHHHHHHCCCCEEEEEECc
Confidence            589999999987  799999999999999999999999764

These toxins glucosylate small GTPases of Rho and Ras families, inhibiting the signalling and regulatory functions of these switch proteins. After receptor-binding, the toxins are endocytosed to reach acidic endosomal compartments from where the toxins are translocated into the cytosol []. TcdB has been shown to consist of a N-terminal glucosyltransferase domain (GTD), responsible for the biological effects of the toxin, a cysteine protease domain (CPD), responsible for autocatalytic cleavage, a hydrophobic region (HR), which has been suggested to be involved in toxin translocation, and a C-terminal repetitive domain involved in receptor binding. The pore-forming region of toxin B has been described to be in a region in the middle of the protein, within amino acid residues 830 and 990 []. This entry represents the N-terminal glucosyltransferase domain from TcdA and TcdB. It is also found in other toxins. The GTD of TcdB has been shown to glycosylate the host's RhoA protein [].; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 2BVL_A 2BVM_A 2VKH_C 2VL8_A 2VKD_A 3SS1_A 3SRZ_A 2VK9_A.

>PRK15382 non-LEE encoded effector protein NleB; Provisional

Probab=94.84  E-value=0.061  Score=50.17  Aligned_cols=76  Identities=28%  Similarity=0.393  Sum_probs=52.0

Q ss_pred             HhHHHHHHHHHcC-------------------cEEEeCCceecccchhhhc--cccccccccccCCccccccceEEec-C
Q 042952          167 SNLIRLAVLYKYG-------------------GVYLDTDFIVLKDFKGLRN--AIGPQEVDQATRKWKTLNNAALVFD-K  224 (349)
Q Consensus       167 SD~~R~~lLyk~G-------------------GiYlD~Dv~~lkpl~~l~~--~~g~e~~~~~~~~~~~l~n~v~~~~-~  224 (349)
                      =|++|-+.|-|-|                   -||||+|+++..-|..+..  -+...-..  ..+...+.||+|+.. .
T Consensus       182 FDF~RNlalLK~g~~F~e~~k~gch~is~~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r--~~~~~slENg~I~VnRs  259 (326)
T PRK15382        182 FDFFRNLALLKAGELFTETGKTGCHNISPCEGCIYLDADMIITDKLGVLYAPDGIAVHVDC--NDDSKSLENGAIVVNRS  259 (326)
T ss_pred             hHHHHHHHHHhcccceeecCCCCCcccCCCCceEEeecceeeecccccEEcCCceEEEEEe--cCCccccccceEEEccC
Confidence            4899988887754                   3899999999988776532  11111000  011246778887665 5


Q ss_pred             CCHHHHHHHHHHHHhcCCCc
Q 042952          225 GHPILFDFLQEFATTFDGNT  244 (349)
Q Consensus       225 ~hp~l~~~l~~~~~~~~~~~  244 (349)
                      +||.+.+-|+.+....++..
T Consensus       260 nHPALl~GL~iMhsK~da~P  279 (326)
T PRK15382        260 NHPALLAGLDIMKSKVDAHP  279 (326)
T ss_pred             CCHHHHhhhHHhhcCCCCCc
Confidence            99999999999998876654

>PRK15383 type III secretion system protein; Provisional

Probab=94.72  E-value=0.067  Score=49.88  Aligned_cols=77  Identities=21%  Similarity=0.286  Sum_probs=52.4

Q ss_pred             hHhHHHHHHHHHcC-------------------cEEEeCCceecccchhhhc--cccccccccccCCccccccceEEec-
Q 042952          166 LSNLIRLAVLYKYG-------------------GVYLDTDFIVLKDFKGLRN--AIGPQEVDQATRKWKTLNNAALVFD-  223 (349)
Q Consensus       166 ~SD~~R~~lLyk~G-------------------GiYlD~Dv~~lkpl~~l~~--~~g~e~~~~~~~~~~~l~n~v~~~~-  223 (349)
                      -=|++|-+.|-|-|                   -||||+|+++..-|..+..  -+...-..  ..+...+.||+|+.. 
T Consensus       189 wFDF~RNlalLK~g~~F~e~~k~gch~is~~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r--~~~~~slENg~I~VnR  266 (335)
T PRK15383        189 WFDFYRNLFLLKGSDAFLEAGKHGCHHLQPGGGCIYLDADMLLTDKLGTLYLPDGIAIHVSR--KDNHVSLENGIIAVNR  266 (335)
T ss_pred             ehHHHHHHHHHhcccceeeccccCCcccCCCCceEEeecceeeecccccEEcCCceEEEEEe--cCCceecccceEEEcc
Confidence            34999988887754                   3899999999988776532  11111000  011246778887665 


Q ss_pred             CCCHHHHHHHHHHHHhcCCCc
Q 042952          224 KGHPILFDFLQEFATTFDGNT  244 (349)
Q Consensus       224 ~~hp~l~~~l~~~~~~~~~~~  244 (349)
                      .+||.+.+-|+.+....++..
T Consensus       267 snHPALl~GL~iMhsK~da~P  287 (335)
T PRK15383        267 SEHPALIKGLEIMHSKPYGDP  287 (335)
T ss_pred             CCCHHHHhhhHHhhcCCCCCc
Confidence            599999999999998876654

>PRK15384 type III secretion system protein; Provisional

Probab=94.48  E-value=0.084  Score=49.28  Aligned_cols=77  Identities=25%  Similarity=0.422  Sum_probs=52.2

Q ss_pred             hHhHHHHHHHHHcC-------------------cEEEeCCceecccchhhhc--cccccccccccCCccccccceEEec-
Q 042952          166 LSNLIRLAVLYKYG-------------------GVYLDTDFIVLKDFKGLRN--AIGPQEVDQATRKWKTLNNAALVFD-  223 (349)
Q Consensus       166 ~SD~~R~~lLyk~G-------------------GiYlD~Dv~~lkpl~~l~~--~~g~e~~~~~~~~~~~l~n~v~~~~-  223 (349)
                      -=|++|-+.|-|-|                   -||||+|+++..-|..+..  -+...-..  ..+...+.||+|+.. 
T Consensus       186 wFDF~RNlalLK~g~~F~e~~k~gch~is~~~GCIYLDaDMilT~KLG~ly~PDGIavhV~r--~~~~~slENg~I~VnR  263 (336)
T PRK15384        186 WFDFYRNMAMLKAGQLFLEADKVGCYDLSTNSGCIYLDADMIITEKLGGIYIPDGIAVHVER--IDGRASMENGIIAVDR  263 (336)
T ss_pred             hhHHHHHHHHHhccceeeecCCCCCcccCCCCceEEeeccceeecccccEEcCCceEEEEEe--cCCceecccceEEEcc
Confidence            34899988887754                   3899999999988776532  11111000  011246778887665 


Q ss_pred             CCCHHHHHHHHHHHHhcCCCc
Q 042952          224 KGHPILFDFLQEFATTFDGNT  244 (349)
Q Consensus       224 ~~hp~l~~~l~~~~~~~~~~~  244 (349)
                      .+||.+.+-|+.+....++..
T Consensus       264 snHPALl~GL~iMhsK~da~P  284 (336)
T PRK15384        264 NNHPALLAGLEIMHTKFDADP  284 (336)
T ss_pred             CCCHHHHhhHHHhhcCCCCCc
Confidence            599999999999998876654

>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family

Probab=91.40  E-value=0.62  Score=44.71  Aligned_cols=106  Identities=11%  Similarity=0.156  Sum_probs=62.7

Q ss_pred             HHHHHHHHH--cC-cEEEeCCceecccchhhhccc-cccccccccCCccccccceEEecCCCHHHHHHHHHHHHhcCCCc
Q 042952          169 LIRLAVLYK--YG-GVYLDTDFIVLKDFKGLRNAI-GPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNT  244 (349)
Q Consensus       169 ~~R~~lLyk--~G-GiYlD~Dv~~lkpl~~l~~~~-g~e~~~~~~~~~~~l~n~v~~~~~~hp~l~~~l~~~~~~~~~~~  244 (349)
                      +.|+.+...  |- -+|||+|++|+++++.|...- ...-..+ ...| .+|.|+|...|.--....+++.+.+......
T Consensus        81 ~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap-~~~~-~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~  158 (278)
T cd06914          81 LTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAP-RAYW-KFASHLMVIKPSKEAFKELMTEILPAYLNKK  158 (278)
T ss_pred             HHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeee-cCcc-eecceeEEEeCCHHHHHHHHHHHHHhcccCC
Confidence            666655432  32 589999999999999986421 0000000 0112 7899999999999888888888876432111


Q ss_pred             cCccccHHHHHHHHHHhCCCCCceEEccCCccc
Q 042952          245 WGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFY  277 (349)
Q Consensus       245 w~~tGP~llt~v~~~~~~~~~~~i~ilP~~~Fy  277 (349)
                       ...--.++..++....+...-.+.++|...+.
T Consensus       159 -~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~  190 (278)
T cd06914         159 -NEYDMDLINEEFYNSKQLFKPSVLVLPHRQYG  190 (278)
T ss_pred             -CCCChHHHHHHHhCCccccCcceEEcCccccc
Confidence             01112466666654321111147888876443

N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

Probab=91.03  E-value=0.31  Score=45.31  Aligned_cols=84  Identities=18%  Similarity=0.201  Sum_probs=54.1

Q ss_pred             cEEEeCCceecccchhhhcc---ccccccccccCCccccccceEEecCCCHHHHHHHHHHHHhcCCCccCccccHHHHHH
Q 042952          180 GVYLDTDFIVLKDFKGLRNA---IGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATTFDGNTWGHNGPYMLTRV  256 (349)
Q Consensus       180 GiYlD~Dv~~lkpl~~l~~~---~g~e~~~~~~~~~~~l~n~v~~~~~~hp~l~~~l~~~~~~~~~~~w~~tGP~llt~v  256 (349)
                      =+|||+|++++++++++.+.   ++.....   .....+|.|+|.+.++......+++.+.+...   ....--.++..+
T Consensus        93 vlylD~D~~v~~~i~~Lf~~~~~~~a~~d~---~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~---~~~~DQdiLN~~  166 (240)
T cd02537          93 VVFLDADTLVLRNIDELFDLPGEFAAAPDC---GWPDLFNSGVFVLKPSEETFNDLLDALQDTPS---FDGGDQGLLNSY  166 (240)
T ss_pred             EEEEeCCeeEccCHHHHhCCCCceeeeccc---CccccccceEEEEcCCHHHHHHHHHHHhccCC---CCCCCHHHHHHH
Confidence            48999999999999998653   2221111   00146899999999998888888888775421   111223466666


Q ss_pred             HHHHhCCCCCceEEccCC
Q 042952          257 TRRVGNTPGYNLTILGLE  274 (349)
Q Consensus       257 ~~~~~~~~~~~i~ilP~~  274 (349)
                      ++..+     .+..+|+.
T Consensus       167 ~~~~~-----~~~~l~~~  179 (240)
T cd02537         167 FSDRG-----IWKRLPFT  179 (240)
T ss_pred             HcCCC-----CEeECCcc
Confidence            54211     26777776

Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional

Probab=90.89  E-value=0.72  Score=45.31  Aligned_cols=111  Identities=14%  Similarity=0.160  Sum_probs=64.0

Q ss_pred             eeEEEEecCCCCCCCHHHHHHHHHHHHHCCCC--eEEEEeCCCCCccccccchhhhhc-cccEEEeCCChhhhhcCCchH
Q 042952           68 IQFFMVWLSPARIFRPRDFLAVETLMKANPHS--CLVLISRSLDTRRGYKILKPLLDL-GFKILAVTPDLASLVKDTPAE  144 (349)
Q Consensus        68 ~~I~~~W~sg~~~l~~r~~~aIeS~~r~nP~~--~V~v~s~~~~~~~g~~~l~~~~~~-~~nV~~~~~d~~~~f~~tP~~  144 (349)
                      ..++.+-..... +-+--.-+|-|+..+||+.  ++.|+++..... ....+..+.+. +.+|.+..+|.+ .+++.|. 
T Consensus        24 ~~i~Iv~~~D~n-y~~~~~vsi~Sil~nn~~~~~~f~Il~~~is~e-~~~~l~~l~~~~~~~i~~~~id~~-~~~~~~~-   99 (334)
T PRK15171         24 NSLDIAYGIDKN-FLFGCGVSIASVLLNNPDKSLVFHVFTDYISDA-DKQRFSALAKQYNTRINIYLINCE-RLKSLPS-   99 (334)
T ss_pred             CceeEEEECcHh-hHHHHHHHHHHHHHhCCCCCEEEEEEeCCCCHH-HHHHHHHHHHhcCCeEEEEEeCHH-HHhCCcc-
Confidence            456666655433 3334445689999999985  456666543321 11233444433 446777766653 2222221 


Q ss_pred             HHHHhhhcCCCCCCCccchhhhHhHHHHHHHH----HcC-cEEEeCCceecccchhhhc
Q 042952          145 TWLKQIKDGERDPGKISLSVQLSNLIRLAVLY----KYG-GVYLDTDFIVLKDFKGLRN  198 (349)
Q Consensus       145 ~w~~~~~~g~~~~~~~~~~a~~SD~~R~~lLy----k~G-GiYlD~Dv~~lkpl~~l~~  198 (349)
                                  ...    ...+=++|+.+--    .+. =+|||+|++|..++++|.+
T Consensus       100 ------------~~~----~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~  142 (334)
T PRK15171        100 ------------TKN----WTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELID  142 (334)
T ss_pred             ------------cCc----CCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHh
Confidence                        011    1356677885433    233 5899999999999998853

>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family

Probab=90.56  E-value=1.2  Score=41.86  Aligned_cols=109  Identities=20%  Similarity=0.256  Sum_probs=56.2

Q ss_pred             eEEEEecCCCCCCCHHHHHHHHHHHHHCC-CCeEEEEeCCCCCccccccchhhhhc-cccEEEeCCChhhhhcCCchHHH
Q 042952           69 QFFMVWLSPARIFRPRDFLAVETLMKANP-HSCLVLISRSLDTRRGYKILKPLLDL-GFKILAVTPDLASLVKDTPAETW  146 (349)
Q Consensus        69 ~I~~~W~sg~~~l~~r~~~aIeS~~r~nP-~~~V~v~s~~~~~~~g~~~l~~~~~~-~~nV~~~~~d~~~~f~~tP~~~w  146 (349)
                      +||.+ .+ .+..-.-...++-|+..+|. ..++.|+++.... ...+.+..+.+. +.++.++.+|...         |
T Consensus         2 ni~~~-~~-~~~y~~~~~v~l~Sll~nn~~~~~fyil~~~is~-e~~~~l~~~~~~~~~~i~~i~i~~~~---------~   69 (248)
T cd06432           2 NIFSV-AS-GHLYERFLRIMMLSVMKNTKSPVKFWFIKNFLSP-QFKEFLPEMAKEYGFEYELVTYKWPR---------W   69 (248)
T ss_pred             eEEEE-cC-cHHHHHHHHHHHHHHHHcCCCCEEEEEEeCCCCH-HHHHHHHHHHHHhCCceEEEEecChh---------h
Confidence            57777 33 33333334556899988874 4556677764332 112234444443 4566666655322         2


Q ss_pred             HHhhhcCCCCCCCccchhhhHhHHHHHH---HHH-cC-cEEEeCCceecccchhhhc
Q 042952          147 LKQIKDGERDPGKISLSVQLSNLIRLAV---LYK-YG-GVYLDTDFIVLKDFKGLRN  198 (349)
Q Consensus       147 ~~~~~~g~~~~~~~~~~a~~SD~~R~~l---Lyk-~G-GiYlD~Dv~~lkpl~~l~~  198 (349)
                      +......     ..   ...+ +.|+.+   |-. .+ =+|||+|++|..++.+|.+
T Consensus        70 ~~~~~~~-----~~---~~~~-y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~  117 (248)
T cd06432          70 LHKQTEK-----QR---IIWG-YKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMD  117 (248)
T ss_pred             hhccccc-----ch---hHHH-HHHHHHHHhhhhccCEEEEEcCCceecccHHHHHh
Confidence            2210000     00   0011 333322   222 33 5899999999999999864

C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface

Probab=89.98  E-value=0.85  Score=42.24  Aligned_cols=164  Identities=18%  Similarity=0.163  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHCC--CCeEEEEeCCCCCccccccchhhhhc-cccEEEeCCChhhhhcCCchHHHHHhhhcCCCCCCCcc
Q 042952           85 DFLAVETLMKANP--HSCLVLISRSLDTRRGYKILKPLLDL-GFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKIS  161 (349)
Q Consensus        85 ~~~aIeS~~r~nP--~~~V~v~s~~~~~~~g~~~l~~~~~~-~~nV~~~~~d~~~~f~~tP~~~w~~~~~~g~~~~~~~~  161 (349)
                      -+.++.|+.++++  ...+.++++... ......|+.+... +.+|.++.++..... ..+.            ..+.+ 
T Consensus        15 ~~~~l~Sl~~~~~~~~~~~~il~~~is-~~~~~~L~~~~~~~~~~i~~~~i~~~~~~-~~~~------------~~~~~-   79 (248)
T cd04194          15 LAVTIKSILANNSKRDYDFYILNDDIS-EENKKKLKELLKKYNSSIEFIKIDNDDFK-FFPA------------TTDHI-   79 (248)
T ss_pred             HHHHHHHHHhcCCCCceEEEEEeCCCC-HHHHHHHHHHHHhcCCeEEEEEcCHHHHh-cCCc------------ccccc-
Confidence            3445899999999  566677765422 1112234444332 556777766542211 1110            01111 


Q ss_pred             chhhhHhHHHHHHHHHcC----cEEEeCCceecccchhhhc------ccccccccc------------ccCCccccccce
Q 042952          162 LSVQLSNLIRLAVLYKYG----GVYLDTDFIVLKDFKGLRN------AIGPQEVDQ------------ATRKWKTLNNAA  219 (349)
Q Consensus       162 ~~a~~SD~~R~~lLyk~G----GiYlD~Dv~~lkpl~~l~~------~~g~e~~~~------------~~~~~~~l~n~v  219 (349)
                         ..+-+.|+.+-....    =+|||+|++++++++.|.+      .+++-.+..            .......+|.||
T Consensus        80 ---~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsGv  156 (248)
T cd04194          80 ---SYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFNSGV  156 (248)
T ss_pred             ---cHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceeeecc
Confidence               246678888877665    5899999999999998853      122211100            001124688889


Q ss_pred             EEecCC----CHHHHHHHHHHHHhcCCCccCccccHHHHHHHHHHhCCCCCceEEccCCc
Q 042952          220 LVFDKG----HPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEA  275 (349)
Q Consensus       220 ~~~~~~----hp~l~~~l~~~~~~~~~~~w~~tGP~llt~v~~~~~~~~~~~i~ilP~~~  275 (349)
                      |.....    ..+..++++.+.+...  .....--.++..++..       .+..+|+.+
T Consensus       157 ~l~nl~~~r~~~~~~~~~~~~~~~~~--~~~~~DQd~LN~~~~~-------~~~~L~~~~  207 (248)
T cd04194         157 LLINLKKWREENITEKLLELIKEYGG--RLIYPDQDILNAVLKD-------KILYLPPRY  207 (248)
T ss_pred             hheeHHHHHHhhhHHHHHHHHHhCCC--ceeeCChHHHHHHHhC-------CeEEcCccc
Confidence            888754    3456666666665321  1111112355555432       377777654

The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function

Probab=87.53  E-value=3.4  Score=39.12  Aligned_cols=71  Identities=23%  Similarity=0.281  Sum_probs=43.9

Q ss_pred             hhHhHHHHHH---HHHcC-cEEEeCCceecccchhhhcc-ccccccccccCCccccccceEEecC----CCHHHHHHHHH
Q 042952          165 QLSNLIRLAV---LYKYG-GVYLDTDFIVLKDFKGLRNA-IGPQEVDQATRKWKTLNNAALVFDK----GHPILFDFLQE  235 (349)
Q Consensus       165 ~~SD~~R~~l---Lyk~G-GiYlD~Dv~~lkpl~~l~~~-~g~e~~~~~~~~~~~l~n~v~~~~~----~hp~l~~~l~~  235 (349)
                      ..+-++|+.+   |-..+ =+|||+|++|.+++++|.+. ++-......   ...+|.|||....    .+-+..++++.
T Consensus        98 s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav---~dyfNsGV~linl~~wr~~~i~~~~~~~  174 (257)
T cd06429          98 SLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAV---ETSWNPGVNVVNLTEWRRQNVTETYEKW  174 (257)
T ss_pred             CHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEE---hhhcccceEEEeHHHHHhccHHHHHHHH
Confidence            4677889887   33333 59999999999999998642 211100000   0257888988873    44455555555


Q ss_pred             HHH
Q 042952          236 FAT  238 (349)
Q Consensus       236 ~~~  238 (349)
                      +..
T Consensus       175 ~~~  177 (257)
T cd06429         175 MEL  177 (257)
T ss_pred             HHH
Confidence            543

A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=85.61  E-value=0.78  Score=41.54  Aligned_cols=109  Identities=21%  Similarity=0.252  Sum_probs=55.7

Q ss_pred             hHhHHHHHHHHH---cC-cEEEeCCceecccchhhhc------ccccccc---------------ccccCCccccccceE
Q 042952          166 LSNLIRLAVLYK---YG-GVYLDTDFIVLKDFKGLRN------AIGPQEV---------------DQATRKWKTLNNAAL  220 (349)
Q Consensus       166 ~SD~~R~~lLyk---~G-GiYlD~Dv~~lkpl~~l~~------~~g~e~~---------------~~~~~~~~~l~n~v~  220 (349)
                      .+=++|+.+...   ++ =+|||+|++++++++.+.+      .++.-..               .........+|.|||
T Consensus        84 ~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fNsGv~  163 (250)
T PF01501_consen   84 PATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFNSGVM  163 (250)
T ss_dssp             GGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEEEEEE
T ss_pred             HHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCcccccccCcEE
Confidence            344556655444   33 4999999999999998753      1222111               000122367899999


Q ss_pred             EecCCCHHHHHHHHHHHHhc--CCCccCccccHHHHHHHHHHhCCCCCceEEccCCccccCCc
Q 042952          221 VFDKGHPILFDFLQEFATTF--DGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGLEAFYPVNW  281 (349)
Q Consensus       221 ~~~~~hp~l~~~l~~~~~~~--~~~~w~~tGP~llt~v~~~~~~~~~~~i~ilP~~~FyPi~~  281 (349)
                      .+.+...--..+.+.+....  .+......=-.++..++.       ..+..+|..+=+...+
T Consensus       164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~-------~~~~~L~~~~N~~~~~  219 (250)
T PF01501_consen  164 LFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFY-------GNIKPLPCRYNCQPSW  219 (250)
T ss_dssp             EEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHT-------TGEEEEEGGGSEEHHH
T ss_pred             EEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhcc-------ceeEEECchhcccccc
Confidence            99877654444444443321  111111111124444443       1578888765544444

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis

Probab=84.20  E-value=3.1  Score=39.84  Aligned_cols=30  Identities=27%  Similarity=0.352  Sum_probs=22.9

Q ss_pred             HHHHHHHHH----cC-cEEEeCCceecccchhhhc
Q 042952          169 LIRLAVLYK----YG-GVYLDTDFIVLKDFKGLRN  198 (349)
Q Consensus       169 ~~R~~lLyk----~G-GiYlD~Dv~~lkpl~~l~~  198 (349)
                      ++|+.+---    +. =+|||+|++|..+++.|.+
T Consensus        85 y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~  119 (280)
T cd06431          85 LMKLVLTEALPSDLEKVIVLDTDITFATDIAELWK  119 (280)
T ss_pred             HHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHH
Confidence            468876332    33 4999999999999998754

The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil

>PLN00176 galactinol synthase

Probab=81.49  E-value=1.9  Score=42.40  Aligned_cols=69  Identities=19%  Similarity=0.233  Sum_probs=45.1

Q ss_pred             HHHHHHHHcC-cEEEeCCceecccchhhhcc----ccccccc--------------------c-------cc--CCcccc
Q 042952          170 IRLAVLYKYG-GVYLDTDFIVLKDFKGLRNA----IGPQEVD--------------------Q-------AT--RKWKTL  215 (349)
Q Consensus       170 ~R~~lLyk~G-GiYlD~Dv~~lkpl~~l~~~----~g~e~~~--------------------~-------~~--~~~~~l  215 (349)
                      +|+.-|-.|. =+|||+|++|+++++.|.+.    +++-.+.                    +       ..  .....+
T Consensus       105 l~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~g~~~~~yF  184 (333)
T PLN00176        105 LRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELGPPPPLYF  184 (333)
T ss_pred             hhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccchhhccCCCCCeE
Confidence            4444456665 69999999999999998642    1100000                    0       00  011368


Q ss_pred             ccceEEecCCCHHHHHHHHHHHH
Q 042952          216 NNAALVFDKGHPILFDFLQEFAT  238 (349)
Q Consensus       216 ~n~v~~~~~~hp~l~~~l~~~~~  238 (349)
                      |.|+|.+.|..-....+++.+..
T Consensus       185 NSGVlvinps~~~~~~ll~~l~~  207 (333)
T PLN00176        185 NAGMFVFEPSLSTYEDLLETLKI  207 (333)
T ss_pred             EeEEEEEEcCHHHHHHHHHHHHh
Confidence            89999999998887888876653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	349
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 52/325 (16%), Positives = 93/325 (28%), Gaps = 112/325 (34%)

Query: 58  VLKFSTNQCAIQFFMVWLSPARIFRPRDFL------------------------------ 87
           V      QC + F + WL+      P   L                              
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 88  ---AVETLMKANPH-SCLVLISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPA 143
               +  L+K+ P+ +CL L+   L   +  K      +L  KIL  T      V D  +
Sbjct: 230 IQAELRRLLKSKPYENCL-LV---LLNVQNAKAWNA-FNLSCKILLTTRFKQ--VTDFLS 282

Query: 144 ETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGGVYLDTDFIVLKDFKGLRNAIGPQ 203
                 I           L+         ++L K    YLD     L           P+
Sbjct: 283 AATTTHISLDHHSMT---LTPDEV----KSLLLK----YLDCRPQDL-----------PR 320

Query: 204 EVDQATRKWKTLNNAALVFDKGHPILF----DFLQEFATTFDGNTWGHNGPYMLTRVTRR 259
           EV                    +P       + +++   T+D   W H       ++T  
Sbjct: 321 EV-----------------LTTNPRRLSIIAESIRDGLATWD--NWKH---VNCDKLTTI 358

Query: 260 VGNTPGYNLTILGLEAFYPVNWVQIKRFFKKPATEEESKWVDETVLRLSEESYGLHLWNK 319
           + ++         L    P      ++ F + +    S  +   +L L        +W  
Sbjct: 359 IESS---------LNVLEPAE---YRKMFDRLSVFPPSAHIPTILLSL--------IWFD 398

Query: 320 ITRKFVINEGSVIHRLIKSHCILCQ 344
           + +  V+    V+++L K   +  Q
Sbjct: 399 VIKSDVM---VVVNKLHKYSLVEKQ 420

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 30/245 (12%), Positives = 59/245 (24%), Gaps = 88/245 (35%)

Query: 3   NIEELEQEEQYGE----TPDPLIPP-----FWLKKEGR-----MEWFQKK---------- 38
            +E  E  + +       P   IP       W           +    K           
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES 424

Query: 39  ---LPDL--EVFQSTNLSRAFHDRVL-KFSTNQCAIQFFMVWLSPARIFRPRDFLAVET- 91
              +P +  E+        A H  ++  ++  +               F   D +     
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKT--------------FDSDDLIPPYLD 470

Query: 92  ----------LMKANPHSCLVLISRSLDTRRGYKILKPLLDLGF---KILA--------- 129
                     L             R    R  +      LD  F   KI           
Sbjct: 471 QYFYSHIGHHLKNIEHPE------RMTLFRMVF------LDFRFLEQKIRHDSTAWNASG 518

Query: 130 -VTPDLASLVK--------DTPAETWLKQIKDGERDPGKISLSVQLSNLIRLAVLYKYGG 180
            +   L  L          D   E  +  I D      +  +  + ++L+R+A++ +   
Sbjct: 519 SILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEA 578

Query: 181 VYLDT 185
           ++ + 
Sbjct: 579 IFEEA 583

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	349
2vk9_A	551	Alpha-toxin; glycosyltransferase; 2.85A {Clostridi	99.28
2bvl_A	543	Toxin B; glycosyltransferase; HET: GLC UDP TBR; 2.	99.1
4dmv_A	556	Toxin A, TCDA; transferase; 1.50A {Clostridium dif	98.87
3jsz_A	525	LGT1, putative uncharacterized protein; glucosyltr	96.73
3tzt_A	276	Glycosyl transferase family 8; structural genomics	92.65
3u2u_A	263	Glycogenin-1, GN-1, GN1; structural genomics, stru	90.27
1ll2_A	333	Glycogenin-1; protein-substrate complex, beta-alph	89.75

>2vk9_A Alpha-toxin; glycosyltransferase; 2.85A {Clostridium novyi} SCOP: c.68.1.22

Probab=99.28  E-value=1.5e-11  Score=123.13  Aligned_cols=40  Identities=8%  Similarity=0.138  Sum_probs=37.6

Q ss_pred             cceeEEEEecCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 042952           66 CAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRS  107 (349)
Q Consensus        66 ~~~~I~~~W~sg~~~l~~r~~~aIeS~~r~nP~~~V~v~s~~  107 (349)
                      ++|.||+||.+|.  .|..+..+|+||.+.+||+++.+|.++
T Consensus        96 IPKiIHyiW~Gg~--~P~~~~~cI~sWkk~~PDYei~lW~D~  135 (551)
T 2vk9_A           96 ASKNLSFIWIGGP--ISDQSLEYYNMWKMFNKDYNIRLFYDK  135 (551)
T ss_dssp             CCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred             CCcceEEEEcCCC--CCHHHHHHHHHHHHHCcCCEEEEEecc
Confidence            8899999999998  799999999999999999999999864

>2bvl_A Toxin B; glycosyltransferase; HET: GLC UDP TBR; 2.2A {Clostridium difficile} SCOP: c.68.1.22 PDB: 2bvm_A* 2vkh_A* 2vkd_A* 2vl8_A*

Probab=99.10  E-value=1.9e-10  Score=115.13  Aligned_cols=41  Identities=10%  Similarity=0.186  Sum_probs=38.0

Q ss_pred             CcceeEEEEecCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 042952           65 QCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRS  107 (349)
Q Consensus        65 ~~~~~I~~~W~sg~~~l~~r~~~aIeS~~r~nP~~~V~v~s~~  107 (349)
                      .++|.||+||.+|.  +|..+..+|+||.+++||+++++|.++
T Consensus        93 ~IPKiIHyiW~Gg~--~P~~~~~cI~sWkk~~PDYei~lW~D~  133 (543)
T 2bvl_A           93 PVEKNLHFVWIGGQ--INDTAINYINQWKDVNSDYNVNVFYDS  133 (543)
T ss_dssp             ECCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred             CCCCceEEEEeCCC--CCHHHHHHHHHHHHHCcCCEEEEEecc
Confidence            48899999999988  799999999999999999999999864

>4dmv_A Toxin A, TCDA; transferase; 1.50A {Clostridium difficile} PDB: 4dmw_A* 3ss1_A 3srz_A

Probab=98.87  E-value=3.9e-09  Score=104.95  Aligned_cols=42  Identities=12%  Similarity=0.178  Sum_probs=38.5

Q ss_pred             CCcceeEEEEecCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 042952           64 NQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRS  107 (349)
Q Consensus        64 ~~~~~~I~~~W~sg~~~l~~r~~~aIeS~~r~nP~~~V~v~s~~  107 (349)
                      ..++|.||+||.||.  .|..+..+|+||.+.+||+++++|.+.
T Consensus       106 ~~IPKiIHy~W~Gg~--~P~~~~kcI~sWkk~~PDYeI~lW~Ds  147 (556)
T 4dmv_A          106 SPVEKNLHFVWIGGE--VSDIALEYIKQWADINAEYNIKLWYDS  147 (556)
T ss_dssp             EECCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred             cccCCceEEEecCCC--CCHHHHHHHHHHHHHCCCCeEEEEeCc
Confidence            368999999999986  799999999999999999999999874

>3jsz_A LGT1, putative uncharacterized protein; glucosyltransferase, legionnaire'S disease, legionella pneum transferase; HET: MSE UPG; 1.70A {Legionella pneumophila} PDB: 2wzg_A* 3jt1_A* 2wzf_A*

Probab=96.73  E-value=0.0028  Score=60.81  Aligned_cols=117  Identities=21%  Similarity=0.249  Sum_probs=81.8

Q ss_pred             ceeEEEEecCCCC--CCCHHHHHHHHHHHHHCCCCeEEE-EeCCCCCccccccchhhhhccccEEEeCCChhhhhcCCch
Q 042952           67 AIQFFMVWLSPAR--IFRPRDFLAVETLMKANPHSCLVL-ISRSLDTRRGYKILKPLLDLGFKILAVTPDLASLVKDTPA  143 (349)
Q Consensus        67 ~~~I~~~W~sg~~--~l~~r~~~aIeS~~r~nP~~~V~v-~s~~~~~~~g~~~l~~~~~~~~nV~~~~~d~~~~f~~tP~  143 (349)
                      .+..+-+|.|...  -+|..++-.++-++..+|+.++++ ++.+.-+..+..-+++|.++. +|..+  |.+++-.+.++
T Consensus       132 tn~~~~IWFSn~P~~fMp~e~q~~Lle~re~nPG~~i~LVYsStlLn~~a~~ql~~faken-~Isll--Dids~k~e~~L  208 (525)
T 3jsz_A          132 TNVQTSIWFSIKPELFMPSKQQEALKRRREQYPGCKIRLIYSSSLLNPEANRQMKAFAKKQ-NISLI--DIDSVKTDSPL  208 (525)
T ss_dssp             SSEEEEECCCSSTTCSSCHHHHHHHHHHHHHCTTCEEEEEECSTTSCHHHHHHHHHHHHHT-TEEEE--EGGGCCCCCTH
T ss_pred             CCceEEEEEeCChhHhccHHHHHHHHHHHhhCCCCeEEEEeehhhcCHHHHHHHHHHHHhc-CceEe--ehhhhcchHHH
Confidence            3677889987655  789999999999999999977755 555544433334456676543 56554  55556688899


Q ss_pred             HHHHHhhhcCCCCCCCccchhhhHhHHHHHH-HHHcCcEEEeCCceec
Q 042952          144 ETWLKQIKDGERDPGKISLSVQLSNLIRLAV-LYKYGGVYLDTDFIVL  190 (349)
Q Consensus       144 ~~w~~~~~~g~~~~~~~~~~a~~SD~~R~~l-Lyk~GGiYlD~Dv~~l  190 (349)
                      ...++.-.+. ...|--  .|..||++|..- +|.+ |.|.|.|+=+-
T Consensus       209 ynl~k~EL~n-Lg~GGN--pAaASDivRWlspv~~~-gtYtDfD~PvD  252 (525)
T 3jsz_A          209 YPLIKAELAN-LGMGGN--PAAASDLCRWIPELFNE-GFYVDIDLPVD  252 (525)
T ss_dssp             HHHHHHHHHT-TTTTCC--HHHHHHHHTTCTTTCSS-EEEECTTCCBC
T ss_pred             HHHHHHHHHh-ccCCCC--HHHHHHHHHhhHHhccc-Cceeeeecccc
Confidence            9988864432 344442  488999999764 4444 99999998554

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0

Probab=92.65  E-value=0.2  Score=46.33  Aligned_cols=162  Identities=14%  Similarity=0.113  Sum_probs=80.0

Q ss_pred             HHHHHHHHHHHHCCCCe--EEEEeCCCCCccccccchhhhh-ccccEEEeCCChhhhhcCCchHHHHHhhhcCCCCCCCc
Q 042952           84 RDFLAVETLMKANPHSC--LVLISRSLDTRRGYKILKPLLD-LGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKI  160 (349)
Q Consensus        84 r~~~aIeS~~r~nP~~~--V~v~s~~~~~~~g~~~l~~~~~-~~~nV~~~~~d~~~~f~~tP~~~w~~~~~~g~~~~~~~  160 (349)
                      -...++-|+.+++++..  +.|+++..+.. ....|+.+.+ .+.+|.++.++.. .|++.|.             ...+
T Consensus        19 ~~~v~i~Sl~~~~~~~~~~~~il~~~is~~-~~~~L~~~~~~~~~~i~~~~~~~~-~~~~~~~-------------~~~~   83 (276)
T 3tzt_A           19 QMKVLMTSIYINNPGRIFDVYLIHSRISED-KLKDLGEDLKKFSYTLYPIRATDD-LFSFAKV-------------TDRY   83 (276)
T ss_dssp             HHHHHHHHHHHHSTTCCEEEEEEESCCCHH-HHHHHHHHHHTTTCEEEEEECC---------------------------
T ss_pred             HHHHHHHHHHHhCCCCceEEEEEeCCCCHH-HHHHHHHHHHHcCCEEEEEEeCHH-HHhcCcc-------------cccc
Confidence            34445899999999644  45666543321 1123444433 3456666666532 2322110             0111


Q ss_pred             cchhhhHhHHHHHHHHHc----C-cEEEeCCceecccchhhhc------ccccccccccc------------CCcccccc
Q 042952          161 SLSVQLSNLIRLAVLYKY----G-GVYLDTDFIVLKDFKGLRN------AIGPQEVDQAT------------RKWKTLNN  217 (349)
Q Consensus       161 ~~~a~~SD~~R~~lLyk~----G-GiYlD~Dv~~lkpl~~l~~------~~g~e~~~~~~------------~~~~~l~n  217 (349)
                          ..+-+.|+.+-.-.    . =||||+|++|++++++|.+      .+|+-.+....            .....+|.
T Consensus        84 ----s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~~~~l~~~~~yfNs  159 (276)
T 3tzt_A           84 ----PKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVNRIRLGTDTDYYNS  159 (276)
T ss_dssp             ----CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC--------------------CEEE
T ss_pred             ----CHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHHHhcCCCCCCeEEe
Confidence                24567888776543    3 4999999999999998853      23322111000            00146888


Q ss_pred             ceEEecCC----CHHHHHHHHHHHHhcCCCccCccccHHHHHHHHHHhCCCCCceEEccC
Q 042952          218 AALVFDKG----HPILFDFLQEFATTFDGNTWGHNGPYMLTRVTRRVGNTPGYNLTILGL  273 (349)
Q Consensus       218 ~v~~~~~~----hp~l~~~l~~~~~~~~~~~w~~tGP~llt~v~~~~~~~~~~~i~ilP~  273 (349)
                      |||.....    ..+..++++.+.+.-....++..  .++..++..       .+..+|.
T Consensus       160 GV~linl~~~R~~~~~~~~~~~~~~~~~~~~~~DQ--d~LN~~f~~-------~~~~Lp~  210 (276)
T 3tzt_A          160 GLLLINLKRAREEIDPDEIFSFVEDNHMNLLLPDQ--DILNAMYGD-------RIYPLDD  210 (276)
T ss_dssp             EEEEEEHHHHHHHCCHHHHHHHHHHC--------C--HHHHHHHGG-------GEEEEEH
T ss_pred             eEEEEEHHHHHhhhHHHHHHHHHHhccccccCCCh--hHHHHHHhC-------CEEECCc
Confidence            89888753    23445555555432111112222  355555531       4777776

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A

Probab=90.27  E-value=0.34  Score=44.67  Aligned_cols=57  Identities=16%  Similarity=0.230  Sum_probs=42.7

Q ss_pred             cEEEeCCceecccchhhhcc--ccccccccccCCccccccceEEecCCCHHHHHHHHHHHHh
Q 042952          180 GVYLDTDFIVLKDFKGLRNA--IGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFATT  239 (349)
Q Consensus       180 GiYlD~Dv~~lkpl~~l~~~--~g~e~~~~~~~~~~~l~n~v~~~~~~hp~l~~~l~~~~~~  239 (349)
                      =+|||+|++++++++.|...  +++-.+.   +-...+|.|+|...|......++++.+.+.
T Consensus        99 vlylD~D~~v~~~~~~Lf~~~~~aA~~d~---~~~~~fNsGv~li~p~~~~~~~l~~~~~~~  157 (263)
T 3u2u_A           99 CVFMDADTLVLANIDDLFDREELSAAPDP---GWPDCFNSGVFVYQPSVETYNQLLHLASEQ  157 (263)
T ss_dssp             EEEECTTEEECSCCGGGGGSCSSEEEECT---TSTTSEEEEEEEECCCHHHHHHHHHHHHHH
T ss_pred             EEEEcCCEeeccCHHHHhCCCcceEeccC---CCCccccCeEEEEcccHHHHHHHHHHHHhc
Confidence            69999999999999998642  2222111   112468999999999988999999888753

>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*

Probab=89.75  E-value=0.38  Score=45.75  Aligned_cols=68  Identities=18%  Similarity=0.277  Sum_probs=46.4

Q ss_pred             hHHHHHHHH--HcC-cEEEeCCceecccchhhhcc--ccccccccccCCccccccceEEecCCCHHHHHHHHHHHH
Q 042952          168 NLIRLAVLY--KYG-GVYLDTDFIVLKDFKGLRNA--IGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFAT  238 (349)
Q Consensus       168 D~~R~~lLy--k~G-GiYlD~Dv~~lkpl~~l~~~--~g~e~~~~~~~~~~~l~n~v~~~~~~hp~l~~~l~~~~~  238 (349)
                      -+.|+.+..  .|. =+|||+|++++++++.|.+.  +++-.. .  +-...+|.|||...+......++++.+.+
T Consensus        83 t~~Kl~i~~l~~ydrvlYLDaD~lv~~di~eLf~~~~~aAv~d-~--~~~~~fNsGvmlin~~~~~~~~l~~~~~~  155 (333)
T 1ll2_A           83 TLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPD-P--GWPDCFNSGVFVYQPSVETYNQLLHVASE  155 (333)
T ss_dssp             HHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEEC-S--SSTTSEEEEEEEECCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhHhcCCCeEEEEeCCEEeccCHHHHhCCCceeEEec-C--CCCcceeeeEEEEeCCHHHHHHHHHHHHh
Confidence            455555442  222 39999999999999998652  322111 1  11247899999999998888888887765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	349
d2bvla1	542	c.68.1.22 (A:1-542) Toxin B {Clostridium difficile	0.003
d2vk9a1	540	c.68.1.22 (A:2-541) Alpha-toxin {Clostridium novyi	0.004

>d2bvla1 c.68.1.22 (A:1-542) Toxin B {Clostridium difficile [TaxId: 1496]} Length = 542

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycosylating toxin catalytic domain-like
domain: Toxin B
species: Clostridium difficile [TaxId: 1496]

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 9/22 (40%), Positives = 17/22 (77%)

Query: 167 SNLIRLAVLYKYGGVYLDTDFI 188
           S+++R++ L + GG+YLD D +
Sbjct: 269 SDILRISALKEIGGMYLDVDML 290

>d2vk9a1 c.68.1.22 (A:2-541) Alpha-toxin {Clostridium novyi [TaxId: 1542]} Length = 540

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycosylating toxin catalytic domain-like
domain: Alpha-toxin
species: Clostridium novyi [TaxId: 1542]

 Score = 36.8 bits (85), Expect = 0.004
 Identities = 13/21 (61%), Positives = 18/21 (85%)

Query: 167 SNLIRLAVLYKYGGVYLDTDF 187
           S+++R+A+L KYGGVY D DF
Sbjct: 266 SDILRIAILKKYGGVYCDLDF 286

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	349
d2bvla1	542	Toxin B {Clostridium difficile [TaxId: 1496]}	98.85
d2vk9a1	540	Alpha-toxin {Clostridium novyi [TaxId: 1542]}	98.74
d1ll2a_	263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	95.2
d1ga8a_	282	Galactosyltransferase LgtC {Neisseria meningitidis	93.81

>d2bvla1 c.68.1.22 (A:1-542) Toxin B {Clostridium difficile [TaxId: 1496]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycosylating toxin catalytic domain-like
domain: Toxin B
species: Clostridium difficile [TaxId: 1496]

Probab=98.85  E-value=4.3e-09  Score=103.71  Aligned_cols=41  Identities=10%  Similarity=0.186  Sum_probs=38.0

Q ss_pred             CcceeEEEEecCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 042952           65 QCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRS  107 (349)
Q Consensus        65 ~~~~~I~~~W~sg~~~l~~r~~~aIeS~~r~nP~~~V~v~s~~  107 (349)
                      +++|+||++|++|.  +|..+.-.|..|.+.+||+++.+|.++
T Consensus        93 ~I~K~IH~IWIgG~--~Pd~~~~YI~~wl~~~~dy~~~lW~D~  133 (542)
T d2bvla1          93 PVEKNLHFVWIGGQ--INDTAINYINQWKDVNSDYNVNVFYDS  133 (542)
T ss_dssp             ECCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred             ccCCceEEEEeCCC--CCcchHHHHHHHHHHCCCCeEEEEECC
Confidence            58999999999976  899999999999999999999999874

>d2vk9a1 c.68.1.22 (A:2-541) Alpha-toxin {Clostridium novyi [TaxId: 1542]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycosylating toxin catalytic domain-like
domain: Alpha-toxin
species: Clostridium novyi [TaxId: 1542]

Probab=98.74  E-value=7.4e-09  Score=101.46  Aligned_cols=42  Identities=7%  Similarity=0.120  Sum_probs=38.1

Q ss_pred             CCcceeEEEEecCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 042952           64 NQCAIQFFMVWLSPARIFRPRDFLAVETLMKANPHSCLVLISRS  107 (349)
Q Consensus        64 ~~~~~~I~~~W~sg~~~l~~r~~~aIeS~~r~nP~~~V~v~s~~  107 (349)
                      ++.+|+||++|++|.  +|..+.-.|+-|.+.+||+++.+|.++
T Consensus        93 ~~veKniHfIWIaG~--ppd~~~~YIk~wl~ty~dy~~~lW~D~  134 (540)
T d2vk9a1          93 TIASKNLSFIWIGGP--ISDQSLEYYNMWKMFNKDYNIRLFYDK  134 (540)
T ss_dssp             CBCCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred             CccccceEEEEeCCC--CCcchHHHHHHHHHhCCCCeEEEEECc
Confidence            458999999999994  899999999999999999999999764

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycogenin
domain: Glycogenin
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.20  E-value=0.043  Score=47.63  Aligned_cols=126  Identities=15%  Similarity=0.146  Sum_probs=70.9

Q ss_pred             HHHHHHHHCCCCeEEEEe-CCCCCccccccchhhhhccccEEEeC-CChhhhhcCCchHHHHHhhhcCCCCCCCccchhh
Q 042952           88 AVETLMKANPHSCLVLIS-RSLDTRRGYKILKPLLDLGFKILAVT-PDLASLVKDTPAETWLKQIKDGERDPGKISLSVQ  165 (349)
Q Consensus        88 aIeS~~r~nP~~~V~v~s-~~~~~~~g~~~l~~~~~~~~nV~~~~-~d~~~~f~~tP~~~w~~~~~~g~~~~~~~~~~a~  165 (349)
                      .+.|+.++++...++++. +.. +.   ..++.+.+.+..+..+. ++...     +.. .... . .     .    -.
T Consensus        22 l~~SL~~~~~~~~~vvl~~~~i-~~---~~~~~L~~~~~~~~~v~~i~~~~-----~~~-~~~~-~-~-----~----~~   80 (263)
T d1ll2a_          22 LGSSLKQHRTSRRLAVLTTPQV-SD---TMRKALEIVFDEVITVDILDSGD-----SAH-LTLM-K-R-----P----EL   80 (263)
T ss_dssp             HHHHHHHTTCCSEEEEEECTTS-CH---HHHHHHHHHCSEEEECCTTSTTS-----TTH-HHHH-H-C-----G----GG
T ss_pred             HHHHHHHHCCCCCEEEEECCCC-CH---HHHHHHHHhCCcceeEEeecCcc-----hhh-hhhh-c-c-----c----cc
Confidence            468999999999987664 332 21   12333433344443332 22111     101 1110 0 0     1    12


Q ss_pred             hHhHHHHHHHHHcCc----EEEeCCceecccchhhhc--cccccccccccCCccccccceEEecCCCHHHHHHHHHHHH
Q 042952          166 LSNLIRLAVLYKYGG----VYLDTDFIVLKDFKGLRN--AIGPQEVDQATRKWKTLNNAALVFDKGHPILFDFLQEFAT  238 (349)
Q Consensus       166 ~SD~~R~~lLyk~GG----iYlD~Dv~~lkpl~~l~~--~~g~e~~~~~~~~~~~l~n~v~~~~~~hp~l~~~l~~~~~  238 (349)
                      .+-+.|+.+.. ...    +|||+|+++++++++|.+  .++....   ......++.|||...+.--..+.+.+.+.+
T Consensus        81 ~~ty~Kl~i~~-l~~ydkvlYLDaD~lv~~~id~Lf~~~~~~a~~~---~~~~~~~nsGv~l~~p~~~~~~~i~~~~~~  155 (263)
T d1ll2a_          81 GVTLTKLHCWS-LTQYSKCVFMDADTLVLANIDDLFEREELSAAPD---PGWPDCFNSGVFVYQPSVETYNQLLHVASE  155 (263)
T ss_dssp             HHHHHHGGGGG-CTTCSEEEEECTTEEECSCCGGGGGSCSSEEEEC---SSSTTSEEEEEEEECCCHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHhh-hcccceEEEeCCCEEEecCHHHHhcCCccceecc---CCCcccccCCcEEECccHHHHHHHHHHHHh
Confidence            45577776643 444    999999999999999864  2222111   112357889999999987666666665554

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=93.81  E-value=0.067  Score=46.79  Aligned_cols=137  Identities=16%  Similarity=0.131  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHCCCCe--EEEEeCCCCCccccccchhhh-hccccEEEeCCChhhhhcCCchHHHHHhhhcCCCCCCCcc
Q 042952           85 DFLAVETLMKANPHSC--LVLISRSLDTRRGYKILKPLL-DLGFKILAVTPDLASLVKDTPAETWLKQIKDGERDPGKIS  161 (349)
Q Consensus        85 ~~~aIeS~~r~nP~~~--V~v~s~~~~~~~g~~~l~~~~-~~~~nV~~~~~d~~~~f~~tP~~~w~~~~~~g~~~~~~~~  161 (349)
                      ...++.|+.++||+..  +.++++..+... ...+.... ..+.+|.++.++...+. +.|..        .    ..++
T Consensus        15 ~~~~i~SL~~~~~~~~~~~~il~~~~~~~~-~~~l~~~~~~~~~~i~~~~~~~~~~~-~~~~~--------~----~~~s   80 (282)
T d1ga8a_          15 LCVAAKSVEAAHPDTEIRFHVLDAGISEAN-RAAVAANLRGGGGNIRFIDVNPEDFA-GFPLN--------I----RHIS   80 (282)
T ss_dssp             HHHHHHHHHHHCTTSCCEEEEEESSCCHHH-HHHHHHTSGGGTTTEEEEECCGGGGT-TSCCC--------C----TTCC
T ss_pred             HHHHHHHHHHHCcCCCEEEEEEcCCCCHHH-HHHHHHHHHHcCCeEEEEECCchHhc-ccccc--------c----cccC
Confidence            3445899999999865  556665433211 11222222 23457777777654332 22211        0    1111


Q ss_pred             chhhhHhHHHHHHHHH---cC-cEEEeCCceecccchhhhc------ccccccccc--c----------cCCccccccce
Q 042952          162 LSVQLSNLIRLAVLYK---YG-GVYLDTDFIVLKDFKGLRN------AIGPQEVDQ--A----------TRKWKTLNNAA  219 (349)
Q Consensus       162 ~~a~~SD~~R~~lLyk---~G-GiYlD~Dv~~lkpl~~l~~------~~g~e~~~~--~----------~~~~~~l~n~v  219 (349)
                          .+=+.|+.+=..   ++ -||||+|+++++++++|.+      .+|+-....  .          ......+|.||
T Consensus        81 ----~~~y~Rl~l~~~lp~~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsGV  156 (282)
T d1ga8a_          81 ----ITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFNAGV  156 (282)
T ss_dssp             ----GGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEEEEE
T ss_pred             ----HHHHHHHHHhhhCCccceEEEecCCEEEecchHHHHhcccccceeeeehhhhhhhhhhhHHHhCCCCCCceeecce
Confidence                112556654332   33 5999999999999998853      222211100  0          01124589999


Q ss_pred             EEecC----CCHHHHHHHHHHHHh
Q 042952          220 LVFDK----GHPILFDFLQEFATT  239 (349)
Q Consensus       220 ~~~~~----~hp~l~~~l~~~~~~  239 (349)
                      |....    ...+..++++.+.+.
T Consensus       157 ml~n~~~~r~~~~~~~~~~~~~~~  180 (282)
T d1ga8a_         157 LLINLKKWRRHDIFKMSSEWVEQY  180 (282)
T ss_dssp             EEECHHHHTTSCHHHHHHHHHHHH
T ss_pred             eeechhhhhhhhHHHHHHHHHHhc
Confidence            98853    445677777776654