Citrus Sinensis ID: 043027


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
AFEIQNNCIYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFSADGTGNCESGDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKFFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
cEEEEEcccccEEcEEEcccccccccccEEEEEEcccEEEEEccccccccccccccccccccccEEccccccccccEEEEEEEEcccccccccccccccccccEEcccccccccEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccEEccccccEEEEEcc
cEEEEEcccccEEEEEEcccEcEcccccEEEEEccccEEEEEEEEEEEccccEEEEEEcccccEccccccccccccEEEEEEEEHHHEEEEEEEccccEcccEEEEEcccccccccccEEEccccccHHcccccccccHHHHccccccccccccccccccHHHHHHHHHccccEcccccHHHHcEEEEccccEEEEEcc
afeiqnncIYTVWaaanpgggkelhqhQSWHINLTDAGSIwartncnfsadgtgncesgdcdgvlncasdssppvtlAEYSLnvsknfdlfnlslmngfnipmefkgtssMCTQVIKCagdinglcpnelrhpggcnnpctlfkndqfccnvdrrscgataYSKFFknlcpnvytypmddpastlacptgtgykvvfcp
afeiqnnciYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFSADGTGNCESGDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKFFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
AFEIQNNCIYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFSADGTGNCESGDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKFFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
***IQNNCIYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFSADGTGNCESGDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKFFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFC*
AFEIQNNCIYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFSADGTGNCESGDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKFFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
AFEIQNNCIYTVWAAANPG*********SWHINLTDAGSIWARTNCNFSADGTGNCESGDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKFFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
AFEIQNNCIYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFSADGTGNCESGDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKFFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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AFEIQNNCIYTVWAAANPGGGKELHQHQSWHINLTDAGSIWARTNCNFSADGTGNCESGDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKFFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query199 2.2.26 [Sep-21-2011]
P81370225 Thaumatin-like protein OS N/A no 0.984 0.871 0.587 4e-64
P50700244 Osmotin-like protein OSM3 yes no 0.984 0.803 0.562 3e-62
P25096202 Protein P21 OS=Glycine ma no no 0.984 0.970 0.564 8e-62
E3SU11226 Thaumatin-like protein OS N/A no 0.989 0.871 0.537 5e-60
G5DC91200 Thaumatin-like protein 1 N/A no 0.969 0.965 0.530 3e-59
P07052226 Pathogenesis-related prot N/A no 0.984 0.867 0.537 4e-57
P13046226 Pathogenesis-related prot N/A no 0.984 0.867 0.527 5e-56
Q01591238 Osmotin-like protein TPM- N/A no 0.984 0.823 0.536 5e-56
P14170246 Osmotin OS=Nicotiana taba N/A no 0.984 0.796 0.526 4e-55
P50702247 Osmotin-like protein OSML N/A no 0.984 0.793 0.526 7e-55
>sp|P81370|TLP_ACTDE Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2 Back     alignment and function desciption
 Score =  244 bits (622), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 118/201 (58%), Positives = 141/201 (70%), Gaps = 5/201 (2%)

Query: 2   FEIQNNCIYTVWAAANPGGGKELHQHQSWHINL---TDAGSIWARTNCNFSADGTGNCES 58
           F I NNC +TVWAAA PGGGK L + Q+W IN    T    +W RT CNF   G G C++
Sbjct: 27  FNIINNCPFTVWAAAVPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRGKCQT 86

Query: 59  GDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQVIKC 118
           GDC+G+L C +   PP TLAEY+LN   N D F++SL++GFN+ MEF  TS  CT+ IKC
Sbjct: 87  GDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGIKC 146

Query: 119 AGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKFFKNLCPNVYTYPM 178
             DING CPNELR PGGCNNPCT+FK DQ+CCN    +CG T +SKFFK+ CP+ Y+YP 
Sbjct: 147 TADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSG--NCGLTNFSKFFKDRCPDAYSYPK 204

Query: 179 DDPASTLACPTGTGYKVVFCP 199
           DD  ST  CP GT YKVVFCP
Sbjct: 205 DDQTSTFTCPAGTNYKVVFCP 225




Has antifungal activity.
Actinidia deliciosa (taxid: 3627)
>sp|P50700|OSL3_ARATH Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2 Back     alignment and function description
>sp|P25096|P21_SOYBN Protein P21 OS=Glycine max PE=1 SV=1 Back     alignment and function description
>sp|E3SU11|ALL13_OLEEU Thaumatin-like protein OS=Olea europaea PE=1 SV=1 Back     alignment and function description
>sp|G5DC91|TLP1_MANZA Thaumatin-like protein 1 (Fragment) OS=Manilkara zapota GN=TLP PE=3 SV=1 Back     alignment and function description
>sp|P07052|PRR2_TOBAC Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|P13046|PRR1_TOBAC Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1 Back     alignment and function description
>sp|Q01591|TPM1_SOLLC Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1 Back     alignment and function description
>sp|P14170|OSMO_TOBAC Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2 Back     alignment and function description
>sp|P50702|OS81_SOLCO Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query199
449452358223 PREDICTED: thaumatin-like protein-like [ 0.994 0.887 0.577 1e-64
224058461231 predicted protein [Populus trichocarpa] 0.994 0.857 0.563 7e-63
270271313241 pathogenesis-related thaumatin, partial 0.994 0.821 0.563 1e-62
146737976201 thaumatin-like protein [Actinidia delici 0.984 0.975 0.592 1e-62
190358875225 RecName: Full=Thaumatin-like protein; Al 0.984 0.871 0.587 2e-62
255740183225 thaumatin-like protein [Nepenthes raffle 0.984 0.871 0.582 3e-62
255740177225 thaumatin-like protein [Nepenthes x henr 0.984 0.871 0.582 4e-62
161375756230 osmotin [Piper colubrinum] 0.984 0.852 0.572 7e-62
441482370225 thaumatin-like protein [Actinidia chinen 0.984 0.871 0.582 2e-61
34538351242 osmotin-like protein I [Gossypium hirsut 0.989 0.814 0.562 2e-61
>gi|449452358|ref|XP_004143926.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] gi|449495850|ref|XP_004159963.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 116/201 (57%), Positives = 144/201 (71%), Gaps = 3/201 (1%)

Query: 2   FEIQNNCIYTVWAAANPGGGKELHQHQSWHINL---TDAGSIWARTNCNFSADGTGNCES 58
           F+I+NNC + VWAAA PGGG+ L+Q+  W +N+   T A  IWARTNCNF   G G C++
Sbjct: 23  FQIRNNCPFAVWAAAVPGGGRRLNQNDVWTLNVNPGTVAARIWARTNCNFDGSGRGRCQT 82

Query: 59  GDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQVIKC 118
           GDC G+L C +  +PP TLAEY+LN   N D F++SL++GFN+PMEF  TS  C + I+C
Sbjct: 83  GDCGGLLQCQAYGTPPNTLAEYALNQFNNLDFFDISLIDGFNVPMEFSPTSGGCARGIRC 142

Query: 119 AGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKFFKNLCPNVYTYPM 178
             DING CPNELR PGGCNNPCT+F  D++CC     SCG T YS+FFKN CP+ Y+YP 
Sbjct: 143 TADINGQCPNELRAPGGCNNPCTVFGGDRYCCTAPNSSCGPTDYSRFFKNRCPDAYSYPK 202

Query: 179 DDPASTLACPTGTGYKVVFCP 199
           DD  ST  CP GT Y+VVFCP
Sbjct: 203 DDATSTFTCPGGTNYRVVFCP 223




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058461|ref|XP_002299521.1| predicted protein [Populus trichocarpa] gi|222846779|gb|EEE84326.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|270271313|gb|ACZ67185.1| pathogenesis-related thaumatin, partial [Populus deltoides] Back     alignment and taxonomy information
>gi|146737976|gb|ABQ42566.1| thaumatin-like protein [Actinidia deliciosa] Back     alignment and taxonomy information
>gi|190358875|sp|P81370.2|TLP_ACTDE RecName: Full=Thaumatin-like protein; AltName: Allergen=Act d 2; Flags: Precursor gi|71057064|emb|CAI38795.2| thaumatin-like protein [Actinidia deliciosa] gi|441482368|gb|AGC39175.1| thaumatin-like protein [Actinidia deliciosa] Back     alignment and taxonomy information
>gi|255740183|gb|ACU31848.1| thaumatin-like protein [Nepenthes rafflesiana] Back     alignment and taxonomy information
>gi|255740177|gb|ACU31845.1| thaumatin-like protein [Nepenthes x henryana] Back     alignment and taxonomy information
>gi|161375756|gb|ABX71220.1| osmotin [Piper colubrinum] Back     alignment and taxonomy information
>gi|441482370|gb|AGC39176.1| thaumatin-like protein [Actinidia chinensis] Back     alignment and taxonomy information
>gi|34538351|gb|AAQ74156.1| osmotin-like protein I [Gossypium hirsutum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query199
TAIR|locus:2139777244 OSM34 "osmotin 34" [Arabidopsi 0.984 0.803 0.562 9.7e-64
TAIR|locus:2037227246 AT1G75050 "AT1G75050" [Arabido 0.984 0.796 0.406 3.7e-39
TAIR|locus:2027161246 TLP-3 "AT1G75030" [Arabidopsis 0.984 0.796 0.390 7e-38
TAIR|locus:2037235239 PR5 "AT1G75040" [Arabidopsis t 0.979 0.815 0.387 4.4e-36
TAIR|locus:2203236356 AT1G77700 "AT1G77700" [Arabido 0.964 0.539 0.378 8.3e-35
TAIR|locus:2121189345 AT4G38660 "AT4G38660" [Arabido 0.979 0.565 0.382 4.6e-34
TAIR|locus:2016442247 AT1G19320 "AT1G19320" [Arabido 0.979 0.789 0.366 1.1e-32
TAIR|locus:2827805253 AT2G17860 "AT2G17860" [Arabido 0.984 0.774 0.370 2.6e-31
TAIR|locus:2178077256 AT5G40020 "AT5G40020" [Arabido 0.984 0.765 0.339 3e-30
TAIR|locus:2135882260 TLP1 "AT4G24180" [Arabidopsis 0.879 0.673 0.355 3.8e-30
TAIR|locus:2139777 OSM34 "osmotin 34" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
 Identities = 113/201 (56%), Positives = 139/201 (69%)

Query:     2 FEIQNNCIYTVWAAANPGGGKELHQHQSWHINL---TDAGSIWARTNCNFSADGTGNCES 58
             FEI N C YTVWAAA+PGGG+ L   QSW +++   T    IW RTNCNF + G G C++
Sbjct:    25 FEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQT 84

Query:    59 GDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQVIKC 118
             GDC G L C     PP TLAEY+LN   N D +++SL++GFNIPMEF  TSS C +++ C
Sbjct:    85 GDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRIL-C 143

Query:   119 AGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKFFKNLCPNVYTYPM 178
               DING CPN LR PGGCNNPCT+F+ +Q+CC   + SC  T YS+FFK  CP+ Y+YP 
Sbjct:   144 TADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSYPQ 203

Query:   179 DDPASTLACPTGTGYKVVFCP 199
             DDP ST  C T T Y+VVFCP
Sbjct:   204 DDPTSTFTC-TNTNYRVVFCP 223




GO:0005576 "extracellular region" evidence=ISM
GO:0051707 "response to other organism" evidence=ISS
GO:0009651 "response to salt stress" evidence=IEP
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IDA
GO:0009816 "defense response to bacterium, incompatible interaction" evidence=ISS
TAIR|locus:2037227 AT1G75050 "AT1G75050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037235 PR5 "AT1G75040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2203236 AT1G77700 "AT1G77700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827805 AT2G17860 "AT2G17860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178077 AT5G40020 "AT5G40020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135882 TLP1 "AT4G24180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
E3SU11ALL13_OLEEUNo assigned EC number0.53730.98990.8716N/Ano
P81370TLP_ACTDENo assigned EC number0.58700.98490.8711N/Ano
P13046PRR1_TOBACNo assigned EC number0.52730.98490.8672N/Ano
P07052PRR2_TOBACNo assigned EC number0.53730.98490.8672N/Ano
G5DC91TLP1_MANZANo assigned EC number0.53060.96980.965N/Ano
Q01591TPM1_SOLLCNo assigned EC number0.53650.98490.8235N/Ano
P50700OSL3_ARATHNo assigned EC number0.56210.98490.8032yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.I.8918.1
hypothetical protein (231 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query199
pfam00314212 pfam00314, Thaumatin, Thaumatin family 5e-70
smart00205218 smart00205, THN, Thaumatin family 1e-69
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 1e-57
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 2e-45
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 2e-33
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 4e-24
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 1e-23
>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
 Score =  211 bits (540), Expect = 5e-70
 Identities = 92/213 (43%), Positives = 120/213 (56%), Gaps = 20/213 (9%)

Query: 6   NNCIYTVWAAANPG--------GGKELHQHQSWHINLTD--AGSIWARTNCNFSADGTGN 55
           NNC YTVW    PG        GG  L+  QSW +++    +G IW RT C+F A G G+
Sbjct: 1   NNCPYTVWPGILPGGGAPPLSTGGFALNPGQSWSLDVPAGWSGRIWGRTGCSFDAGGRGS 60

Query: 56  CESGDCDGVLNCA-SDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQ 114
           C++GDC G L C  S  +PP TLAE++LN     D +++SL++GFN+PM    T     +
Sbjct: 61  CQTGDCGGKLECNGSGGAPPATLAEFTLNGGGGLDFYDISLVDGFNLPMSVTPTGGGNCK 120

Query: 115 VIKCAGDINGLCPNELR-----HPGGCNNPCTLFKNDQFCCNVD---RRSCGATAYSKFF 166
              CA DING CP+EL+         C + C  F  D++CC        +C  T YSKFF
Sbjct: 121 AAGCAADINGQCPSELQVKSNGRVVACKSACEAFNTDEYCCRGAYGTPDTCKPTDYSKFF 180

Query: 167 KNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP 199
           K  CP+ Y+Y  DDP ST  CP GT YK+ FCP
Sbjct: 181 KAACPDAYSYAYDDPTSTFTCP-GTNYKITFCP 212


Length = 212

>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 199
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 98.25
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
Probab=100.00  E-value=1.1e-82  Score=540.15  Aligned_cols=197  Identities=40%  Similarity=0.929  Sum_probs=186.3

Q ss_pred             CEEEEeCCCCceeeeeeC--------CCCeeecCCCceEEEE--ecceeeeeeecccCCCCCCccCcCCCCCCccccCC-
Q 043027            1 AFEIQNNCIYTVWAAANP--------GGGKELHQHQSWHINL--TDAGSIWARTNCNFSADGTGNCESGDCDGVLNCAS-   69 (199)
Q Consensus         1 t~ti~N~C~~tVWp~~~p--------~~g~~L~~g~s~s~~v--~w~GriWaRtgC~~~~~g~~~C~TGdC~g~l~C~~-   69 (199)
                      +|||+|||+||||||+++        ++||+|+||++++|.|  .|+|||||||+|+||+.|+++|+||||+|+|+|++ 
T Consensus         1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g~   80 (219)
T cd09218           1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCGGGLECNGA   80 (219)
T ss_pred             CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCcceeeeeccCCCCCCCCccccccCCCCCeeecCCC
Confidence            799999999999999964        4799999999999999  89999999999999999999999999999999997 


Q ss_pred             CCCCCcceeEEEeccCCCccceeeccccccCCCceeeecCC--CccCCcccccccccCCCcCCCcc------cCccCCcc
Q 043027           70 DSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSS--MCTQVIKCAGDINGLCPNELRHP------GGCNNPCT  141 (199)
Q Consensus        70 ~g~~p~TlaEftl~~~~~~d~YdVSlVdG~Nlp~~i~p~~~--~C~~~~~C~~dl~~~CP~~l~~~------~gC~SaC~  141 (199)
                      .|.||+|||||+|+..+++|||||||||||||||+|.|+++  .| +.++|.+|||+.||+|||++      +||+|||+
T Consensus        81 ~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~~~C-~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC~  159 (219)
T cd09218          81 GGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGC-RTAGCVADLNAVCPAELQVKNSGGRVVACKSACL  159 (219)
T ss_pred             CCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCCCCC-CCCcccCcccccCCHHHeeccCCCcEeeecCHHH
Confidence            46899999999999877899999999999999999999763  69 78999999999999999985      48999999


Q ss_pred             ccCCCccccccCC---CCCCCchhhhHhhhcCCCCcCCCCCCCCCceeeCCCCceEEEec
Q 043027          142 LFKNDQFCCNVDR---RSCGATAYSKFFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFC  198 (199)
Q Consensus       142 ~~~~~~~CC~g~~---~~C~pt~ys~~fK~~CP~AYsya~Dd~~stftC~~~~~y~itFC  198 (199)
                      +|++|||||+|+|   ++|+|+.||++||++||+||+|||||++|+|+|+++++|+|+||
T Consensus       160 ~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         160 AFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             hhCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            9999999999988   58999999999999999999999999999999998899999998



This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele

>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>smart00205 THN Thaumatin family Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query199
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 2e-63
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 3e-61
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 5e-56
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 3e-55
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 8e-53
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 1e-52
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 2e-49
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 2e-49
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 4e-49
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 4e-49
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 6e-49
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 2e-48
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 2e-47
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 8e-26
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 1e-23
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 1e-16
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure

Iteration: 1

Score = 238 bits (606), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 114/201 (56%), Positives = 143/201 (71%), Gaps = 6/201 (2%) Query: 2 FEIQNNCIYTVWAAANPGGGKELHQHQSWHINL---TDAGSIWARTNCNFSADGTGNCES 58 FEI N C YTVWAAA PGGG++L+Q QSW IN+ T G IW RT C+F G G C++ Sbjct: 3 FEIVNRCSYTVWAAAVPGGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQT 62 Query: 59 GDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQVIKC 118 GDC GVL+C + +PP TLAE++LN N D F++SL++GFN+PM+F TS C + I+C Sbjct: 63 GDCGGVLSCTAYGNPPNTLAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSGGC-RGIRC 121 Query: 119 AGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSCGATAYSKFFKNLCPNVYTYPM 178 A DING CP L+ PGGCNNPCT+FK DQ+CCN +C T YS+FFK CP+ Y+YP Sbjct: 122 AADINGQCPGALKAPGGCNNPCTVFKTDQYCCNSG--ACSPTDYSQFFKRNCPDAYSYPK 179 Query: 179 DDPASTLACPTGTGYKVVFCP 199 DD +T CP GT Y+VVFCP Sbjct: 180 DDQTTTFTCPGGTNYRVVFCP 200
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query199
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 3e-53
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 1e-50
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 1e-45
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 8e-45
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 6e-42
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 3e-20
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
 Score =  168 bits (426), Expect = 3e-53
 Identities = 99/204 (48%), Positives = 126/204 (61%), Gaps = 6/204 (2%)

Query: 2   FEIQNNCIYTVWAAANP-GGGKELHQHQSWHINLTD---AGSIWARTNCNFSADGTGNCE 57
           F + N C +TVWAA+ P GGG++L++ +SW I       A  IWART C F A G G+C 
Sbjct: 3   FTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCR 62

Query: 58  SGDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSM-CTQVI 116
           +GDC GVL C      P TLAEY+L    N D F++SL++GFN+PM F       C++  
Sbjct: 63  TGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGP 122

Query: 117 KCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCC-NVDRRSCGATAYSKFFKNLCPNVYT 175
           +CA D+N  CP ELR  G CNN C +FK D++CC       C  T YS++FK  CP+ Y+
Sbjct: 123 RCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDAYS 182

Query: 176 YPMDDPASTLACPTGTGYKVVFCP 199
           YP DD  ST  CP GT YKVVFCP
Sbjct: 183 YPKDDATSTFTCPAGTNYKVVFCP 206


>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query199
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
4aor_D37 Trypsin inhibitor 3; hydrolase-inhibitor complex, 82.7
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
Probab=100.00  E-value=1.8e-88  Score=567.16  Aligned_cols=196  Identities=58%  Similarity=1.238  Sum_probs=190.3

Q ss_pred             CEEEEeCCCCceeeeeeCCCCeeecCCCceEEEE--ecc-eeeeeeecccCCCCCCccCcCCCCCCccccCCCCCCCcce
Q 043027            1 AFEIQNNCIYTVWAAANPGGGKELHQHQSWHINL--TDA-GSIWARTNCNFSADGTGNCESGDCDGVLNCASDSSPPVTL   77 (199)
Q Consensus         1 t~ti~N~C~~tVWp~~~p~~g~~L~~g~s~s~~v--~w~-GriWaRtgC~~~~~g~~~C~TGdC~g~l~C~~~g~~p~Tl   77 (199)
                      ||||+|||+||||||++|++||+|+|||+++|.+  +|+ |||||||+|+||+.|+++|+||||+|+|+|++.|.||+||
T Consensus         2 t~ti~N~C~~tVWp~~~p~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~g~pPaTL   81 (200)
T 1z3q_A            2 TFEIVNRCSYTVWAAAVPGGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQTGDCGGVLSCTAYGNPPNTL   81 (200)
T ss_dssp             EEEEEECSSSCEEEEEETTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSSCCE
T ss_pred             EEEEEeCCCCCeeceEeCCCCcccCCCCeEEEeCCCcccccceeccccCCCCCCCCccccccCcCCeeecCCCCCCCcce
Confidence            6999999999999999999999999999999999  785 9999999999999999999999999999999988999999


Q ss_pred             eEEEeccCCCccceeeccccccCCCceeeecCCCccCCcccccccccCCCcCCCcccCccCCccccCCCccccccCCCCC
Q 043027           78 AEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSSMCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVDRRSC  157 (199)
Q Consensus        78 aEftl~~~~~~d~YdVSlVdG~Nlp~~i~p~~~~C~~~~~C~~dl~~~CP~~l~~~~gC~SaC~~~~~~~~CC~g~~~~C  157 (199)
                      |||+|++.+++|||||||||||||||+|+|+++.| +.++|.+|||+.||+|||+++||+|||++|++|||||+|  ++|
T Consensus        82 aEftL~~~~~~dfYDVSlVDGfNlP~~i~P~~g~C-~~~~C~~dln~~CP~~L~v~~gC~saC~af~~~~yCC~g--~~C  158 (200)
T 1z3q_A           82 AEFALNQFNNLDFFDISLVDGFNVPMDFSPTSGGC-RGIRCAADINGQCPGALKAPGGCNNPCTVFKTDQYCCNS--GAC  158 (200)
T ss_dssp             EEEEEEETTTEEEEEEECTTCBSSCEEEEESSSSS-CCEEECSCHHHHCCTTTEETTEECCHHHHHCCHHHHCTT--SCC
T ss_pred             EEEEecCCCCCceeeeeeeccccCCeeeeeCCCCC-CccccccchhhhCCHHHcccCcccCcccccCCCcccCCC--CCC
Confidence            99999987789999999999999999999998889 889999999999999999999999999999999999999  599


Q ss_pred             CCchhhhHhhhcCCCCcCCCCCCCCCceeeCCCCceEEEecC
Q 043027          158 GATAYSKFFKNLCPNVYTYPMDDPASTLACPTGTGYKVVFCP  199 (199)
Q Consensus       158 ~pt~ys~~fK~~CP~AYsya~Dd~~stftC~~~~~y~itFCP  199 (199)
                      +|+.||++||++||+||||||||++|||+|+++++|+|+|||
T Consensus       159 ~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP  200 (200)
T 1z3q_A          159 SPTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP  200 (200)
T ss_dssp             CCCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred             CchhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence            999999999999999999999999999999988999999998



>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 199
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 3e-62
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 7e-62
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 5e-60
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Zeamatin
species: Maize (Zea mays) [TaxId: 4577]
 Score =  189 bits (482), Expect = 3e-62
 Identities = 100/204 (49%), Positives = 127/204 (62%), Gaps = 6/204 (2%)

Query: 2   FEIQNNCIYTVWAAANP-GGGKELHQHQSWHINLTD---AGSIWARTNCNFSADGTGNCE 57
           F + N C +TVWAA+ P GGG++L++ +SW I       A  IWART C F A G G+C 
Sbjct: 3   FTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCR 62

Query: 58  SGDCDGVLNCASDSSPPVTLAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTS-SMCTQVI 116
           +GDC GVL C      P TLAEY+L    N D F++SL++GFN+PM F     S C++  
Sbjct: 63  TGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGP 122

Query: 117 KCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVD-RRSCGATAYSKFFKNLCPNVYT 175
           +CA D+N  CP ELR  G CNN C +FK D++CC       C  T YS++FK  CP+ Y+
Sbjct: 123 RCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDAYS 182

Query: 176 YPMDDPASTLACPTGTGYKVVFCP 199
           YP DD  ST  CP GT YKVVFCP
Sbjct: 183 YPKDDATSTFTCPAGTNYKVVFCP 206


>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query199
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00  E-value=3.5e-85  Score=548.70  Aligned_cols=196  Identities=54%  Similarity=1.140  Sum_probs=187.3

Q ss_pred             CEEEEeCCCCceeeeeeC-CCCeeecCCCceEEEE--ec-ceeeeeeecccCCCCCCccCcCCCCCCccccCCCCCCCcc
Q 043027            1 AFEIQNNCIYTVWAAANP-GGGKELHQHQSWHINL--TD-AGSIWARTNCNFSADGTGNCESGDCDGVLNCASDSSPPVT   76 (199)
Q Consensus         1 t~ti~N~C~~tVWp~~~p-~~g~~L~~g~s~s~~v--~w-~GriWaRtgC~~~~~g~~~C~TGdC~g~l~C~~~g~~p~T   76 (199)
                      +|||+|||+||||||++| ++|++|+||++++|.+  .| +|||||||+|+||+.|+++|+||||+|+|+|++.|.||+|
T Consensus         3 ~fti~N~C~~TVWp~~~p~~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCgg~l~C~~~G~pP~T   82 (208)
T d1auna_           3 VFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNT   82 (208)
T ss_dssp             EEEEEECSSSCEEEEEETTTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSSCC
T ss_pred             EEEEEeCCCCCcccccccCCCCcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcCCeEecCCCCCCCcc
Confidence            699999999999999999 7899999999999999  55 6999999999999999999999999999999999999999


Q ss_pred             eeEEEeccCCCccceeeccccccCCCceeeecCC---CccCCcccccccccCCCcCCCcccCccCCccccCCCccccccC
Q 043027           77 LAEYSLNVSKNFDLFNLSLMNGFNIPMEFKGTSS---MCTQVIKCAGDINGLCPNELRHPGGCNNPCTLFKNDQFCCNVD  153 (199)
Q Consensus        77 laEftl~~~~~~d~YdVSlVdG~Nlp~~i~p~~~---~C~~~~~C~~dl~~~CP~~l~~~~gC~SaC~~~~~~~~CC~g~  153 (199)
                      ||||||+..+++|||||||||||||||+|+|+++   .| +.++|.+|||..||+|||+++||+|||.+|++|||||+++
T Consensus        83 laEftl~~~~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C-~~~~C~~dln~~CP~~L~v~~~C~saC~~~~~~~~CCt~~  161 (208)
T d1auna_          83 LAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKC-HGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQG  161 (208)
T ss_dssp             EEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTC-SCEEECSCHHHHCCTTTEETTEECCHHHHTCSHHHHCTTS
T ss_pred             eEEEEeccCCCcceeccccccccccceEEeccCCCCCCc-CcccccCCccccCCHhhccCCCCccceeecCCCccccCCC
Confidence            9999999877899999999999999999999863   69 8899999999999999999999999999999999999975


Q ss_pred             CCCCCCchhhhHhhhcCCCCcCCCCCCCCCceeeCCC-CceEEEecC
Q 043027          154 RRSCGATAYSKFFKNLCPNVYTYPMDDPASTLACPTG-TGYKVVFCP  199 (199)
Q Consensus       154 ~~~C~pt~ys~~fK~~CP~AYsya~Dd~~stftC~~~-~~y~itFCP  199 (199)
                        +|+|++||++||++||+||||||||++|||+|+++ ++|+|+|||
T Consensus       162 --~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP  206 (208)
T d1auna_         162 --PCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP  206 (208)
T ss_dssp             --CCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEEST
T ss_pred             --cCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCC
Confidence              89999999999999999999999999999999865 799999998



>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure