Citrus Sinensis ID: 043030

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470
MENLRKNQALFLLLLSLSSFYGIALSFSPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGPKVTPFNDTVWRTWLPDDEFLKSMRDQKRVYSTGRIWYQSGGASREIGPDNVYNTARVIAATNASIPNLNMTWEFPVIEGYKYLVRLHFCDIASISLGLLFFNVYVNGNLAYKDLDLSIVAGYSLASPFYADFVVDSYHSGVLSVSVGPSDKSLGYAVDGILNAVEIMKMNKSMGILDGELCAGLILKTWPRGNVGILVPLIAAVCVMLSLSVFKHRTFWFKNSVAWSKLPMDVSEITSKSGNQHT
cccccccHHHHHHHHHHHHHHcccccccccccEEEcccccccccccccEEEccccccccccccccccccEEEEccccccccccccEEEEcccccEEEEEcccccEEEEEEEEEEEccccccccccEEEEEEccEEEEEccEEcccccccEEEEEEEEEccccEEEEEEEccccccEEEEEEEEEccccccEEccccccccccccccccccHHHEEEEEEEEccccccccccccccccccccccccccccccEEEEEccEEEEEccccccccccHHHHHcEEEcccccccccccccEEEcccccccEEEEEEEEEEccccccccEEEEEEEccEEccccccccHHccccccccEEEEEEEEcccccEEEEEEEEcccccccccccEEEEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHEEEEEccccccccccEEEEccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEccccccccccccEEEEccccccccccccccccccccccccccccccccEEEEEEccccEEEEEccccccEEEEEEEEEcccccccccccEEEEEEccEEEEccccccccccccEEEEEEEEccccEEEEEEEEcccccEEEEEEEEEEccccHccccccccccccccccccccccccEEEEEEEEccccccccccccccEEccccccHccccccccEccccccEEEcccccccccccHHHHHHHHHHccccccccccEEEEEEEcccccEEEEEEEEEEEEEcccccEEEEEEEccccccccccEEEEccccccccEEEEEEEEcccccEEEEEEccccccccccccEEEccEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccc
MENLRKNQALFLLLLSLSSFYGialsfspaddylidcgstvdttvdnrlfisdssrasshlltfstrsksiqlshrngklpeiynsarvfdrpsryifkIRDKGTHMVRLHFyqlnssqfvsddaqFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTakfvngdkidnFDALSKQALEVMYRVnvggpkvtpfndtvwrtwlpddeflKSMRDQKRVYSTGRIwyqsggasreigpdnvyNTARVIAATnasipnlnmtwefpvieGYKYLVRLHFCDIASISLGLLFFNVYVNgnlaykdldlsivagyslaspfyadfvvdSYHSGvlsvsvgpsdkslgyAVDGILNAVEIMKMNKsmgildgeLCAGLilktwprgnvgilVPLIAAVCVMLSLSVFKHRTFWFKNsvawsklpmdvseitsksgnqht
MENLRKNQALFLLLLSLSSFYGIALSFSPADDYLIDCGSTVDTTVDNRLFISdssrasshlltfstrsksiqlshrngklpeiynsarvfdrpsrYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVnvggpkvtpfndtvWRTWLPDDEFLKSMRDQKRVYSTgriwyqsggasreigpdNVYNTARVIAATnasipnlnmTWEFPVIEGYKYLVRLHFCDIASISLGLLFFNVYVNGNLAYKDLDLSIVAGYSLASPFYADFVVDSYHSGVLSVsvgpsdkslgYAVDGILNAVEIMKMNKSMGILDGELCAGLILKTWPRGNVGILVPLIAAVCVMLSLSVFKHRTFWFKNSvawsklpmdvseitsksgnqht
MENLRKNQAlfllllslssfYGIALSFSPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGPKVTPFNDTVWRTWLPDDEFLKSMRDQKRVYSTGRIWYQSGGASREIGPDNVYNTARVIAATNASIPNLNMTWEFPVIEGYKYLVRLHFCDIASISLGLLFFNVYVNGNLAYKDLDLSIVAGYSLASPFYADFVVDSYHSGVLSVSVGPSDKSLGYAVDGILNAVEIMKMNKSMGILDGELCAGLILKTWPRGNVGILVPLIAAVCVMLSLSVFKHRTFWFKNSVAWSKLPMDVSEITSKSGNQHT
*******QALFLLLLSLSSFYGIALSFSPADDYLIDCGSTVDTTVDNRLFIS**************************KLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGPKVTPFNDTVWRTWLPDDEFLKSMRDQKRVYSTGRIWYQSGGASREIGPDNVYNTARVIAATNASIPNLNMTWEFPVIEGYKYLVRLHFCDIASISLGLLFFNVYVNGNLAYKDLDLSIVAGYSLASPFYADFVVDSYHSGVLSVSVGPSDKSLGYAVDGILNAVEIMKMNKSMGILDGELCAGLILKTWPRGNVGILVPLIAAVCVMLSLSVFKHRTFWFKNSVAWSKLP***************
******N*ALFLLLLSLSSFYGIALSFSPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTR**********GKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGPKVTPFNDTVWRTWLPDDEFLKSMRDQKRVYSTGRIWYQSGGASREIGPDNVYNTARVIAATNASIPNLNMTWEFPVIEGYKYLVRLHFCDIASISLGLLFFNVYVNGNLAYKDLDLSIVAGYSLASPFYADFVVDSYHSGVLSVSVGPSDKSLGYAVDGILNAVEIMKM****************************VPLIAAVCVMLSLSVFK*******************************
MENLRKNQALFLLLLSLSSFYGIALSFSPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGPKVTPFNDTVWRTWLPDDEFLKSMRDQKRVYSTGRIWYQSGGASREIGPDNVYNTARVIAATNASIPNLNMTWEFPVIEGYKYLVRLHFCDIASISLGLLFFNVYVNGNLAYKDLDLSIVAGYSLASPFYADFVVDSYHSGVLSVSVGPSDKSLGYAVDGILNAVEIMKMNKSMGILDGELCAGLILKTWPRGNVGILVPLIAAVCVMLSLSVFKHRTFWFKNSVAWSKLPMDVSE**********
*ENLRKNQALFLLLLSLSSFYGIALSFSPADDYLIDCGSTVDTTVDNRLFI****************************LPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGPKVTPFNDTVWRTWLPDDEFLKSMRDQKRVYSTGRIWYQSGGASREIGPDNVYNTARVIAATNASIPNLNMTWEFPVIEGYKYLVRLHFCDIASISLGLLFFNVYVNGNLAYKDLDLSIVAGYSLASPFYADFVVDSYHSGVLSVSVGPSDKSLGYAVDGILNAVEIMKMNKSMGILDGELC*GLILKTWPRGNVGILVPLIAAVCVMLSLSVFKHRT****************************
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MENLRKNQALFLLLLSLSSFYGIALSFSPADDYLIDCGSTVDTTVDNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGPKVTPFNDTVWRTWLPDDEFLKSMRDQKRVYSTGRIWYQSGGASREIGPDNVYNTARVIAATNASIPNLNMTWEFPVIEGYKYLVRLHFCDIASISLGLLFFNVYVNGNLAYKDLDLSIVAGYSLASPFYADFVVDSYHSGVLSVSVGPSDKSLGYAVDGILNAVEIMKMNKSMGILDGELCAGLILKTWPRGNVGILVPLIAAVCVMLSLSVFKHRTFWFKNSVAWSKLPMDVSEITSKSGNQHT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query470 2.2.26 [Sep-21-2011]
Q9FLW0 824 Probable receptor-like pr no no 0.774 0.441 0.463 7e-83
Q9T020 878 Probable receptor-like pr no no 0.906 0.485 0.391 1e-69
Q9SJT0 871 Probable receptor-like pr no no 0.910 0.491 0.381 4e-68
Q9LX66 830 Receptor-like protein kin no no 0.946 0.536 0.367 3e-65
Q9FLJ8 842 Probable receptor-like pr no no 0.921 0.514 0.374 4e-63
Q9FN92 829 Probable receptor-like pr no no 0.872 0.494 0.365 1e-61
Q9LK35 855 Receptor-like protein kin no no 0.965 0.530 0.345 6e-57
Q9SA72 849 Probable receptor-like pr no no 0.827 0.458 0.313 7e-44
O22187 834 Probable receptor-like pr no no 0.780 0.440 0.328 8e-44
O80623 815 Probable receptor-like pr no no 0.831 0.479 0.292 3e-38
>sp|Q9FLW0|Y5241_ARATH Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1 Back     alignment and function desciption
 Score =  308 bits (788), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 173/373 (46%), Positives = 241/373 (64%), Gaps = 9/373 (2%)

Query: 26  SFSPADDYLIDCGSTVDTTV-DNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIY 84
           +F+P D+YLI+ GS  +T+    R F+SDSS   S  L+ + RS SI  ++ +   P +Y
Sbjct: 25  AFTPTDNYLINSGSNTNTSFFTTRSFLSDSSEPGSSFLS-TDRSISISDTNPSPDSPVLY 83

Query: 85  NSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGN 144
           N+ARVF     Y F++  KGTH +RLHF    +S+F    A+F VL+NG+ V+++FS  +
Sbjct: 84  NTARVFPVGGSYKFQVTTKGTHFIRLHFAPFKASRFNLRSAKFRVLINGFSVINSFSTSS 143

Query: 145 IIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTA-KFVNGDKI 203
           ++    VKE+++ I+   L I+FLP   S F FVNA+EV SAPKD I+D   K V  +  
Sbjct: 144 VV----VKEFILKIDDPVLEISFLPFKASGFGFVNAVEVFSAPKDYIMDQGTKLVIPNSA 199

Query: 204 DNFDALSKQALEVMYRVNVGGPKVTPFNDTVWRTWLPDDEFLKSMRDQKRVYSTGRIWYQ 263
             F  LS Q LE ++R+NVGG K+TPFNDT+WRTW+ DD +L      +R ++T    YQ
Sbjct: 200 QIFSNLSSQVLETVHRINVGGSKLTPFNDTLWRTWVVDDNYLLLRAAARRAWTTHSPNYQ 259

Query: 264 SGGASREIGPDNVYNTARVIAATNASI-PNLNMTWEFPVIEGYK-YLVRLHFCDIASISL 321
           +GGA+REI PDNVY TA+ +   N  +    N++W F V E    +LVRLHFCDI S SL
Sbjct: 260 NGGATREIAPDNVYMTAQEMDRDNQELQARFNISWGFQVDEKRVLHLVRLHFCDIVSSSL 319

Query: 322 GLLFFNVYVNGNLAYKDLDLSIVAGYSLASPFYADFVVDSYHSGVLSVSVGPSDKSLGYA 381
             L+FNV++N  LA+KD+DLS +  + LASP Y DFV +S  SG+L +SVGPSD S    
Sbjct: 320 NQLYFNVFINEYLAFKDVDLSTLTFHVLASPLYIDFVAESDRSGMLRISVGPSDLSNPAR 379

Query: 382 VDGILNAVEIMKM 394
           V+ +LN VEIM++
Sbjct: 380 VNALLNGVEIMRI 392

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -
>sp|Q9T020|Y4391_ARATH Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1 Back     alignment and function description
>sp|Q9SJT0|Y2214_ARATH Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=3 SV=1 Back     alignment and function description
>sp|Q9LX66|HERK_ARATH Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FLJ8|Y5613_ARATH Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1 Back     alignment and function description
>sp|Q9FN92|Y5597_ARATH Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=1 SV=1 Back     alignment and function description
>sp|Q9LK35|THE1_ARATH Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SA72|Y1357_ARATH Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1 Back     alignment and function description
>sp|O22187|Y2232_ARATH Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=3 SV=1 Back     alignment and function description
>sp|O80623|Y2393_ARATH Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query470
225454346481 PREDICTED: probable receptor-like protei 0.936 0.914 0.629 1e-162
255541670476 ATP binding protein, putative [Ricinus c 0.925 0.913 0.605 1e-153
224130350487 predicted protein [Populus trichocarpa] 0.923 0.891 0.627 1e-153
449495325470 PREDICTED: probable receptor-like protei 0.951 0.951 0.568 1e-137
297848346475 hypothetical protein ARALYDRAFT_887290 [ 0.951 0.941 0.534 1e-134
357507443462 hypothetical protein MTR_7g078220 [Medic 0.942 0.958 0.540 1e-133
217075879462 unknown [Medicago truncatula] 0.942 0.958 0.537 1e-133
388510380462 unknown [Medicago truncatula] 0.942 0.958 0.537 1e-132
334186242478 fringe-related protein [Arabidopsis thal 0.923 0.907 0.530 1e-124
449441618 2819 PREDICTED: uncharacterized protein LOC10 0.623 0.103 0.579 7e-98
>gi|225454346|ref|XP_002278060.1| PREDICTED: probable receptor-like protein kinase At5g24010-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  576 bits (1485), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 280/445 (62%), Positives = 358/445 (80%), Gaps = 5/445 (1%)

Query: 27  FSPADDYLIDCGSTVDTTVD--NRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIY 84
           FSP D+YLI+CGS+ + +VD  NR F+ DS ++ S L+   TR+ SI+ S+ +  L  IY
Sbjct: 30  FSPVDNYLINCGSSDEVSVDGNNRKFMGDSVKSDSVLMC-GTRTISIRDSNPDLGLSPIY 88

Query: 85  NSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGN 144
           ++ARVF +PS+Y F+IRDKGTH VR+HF+QLNS+++   DA FHV VNG++VLSNF+ G 
Sbjct: 89  HTARVFTKPSKYEFEIRDKGTHAVRIHFHQLNSAKYDVSDALFHVSVNGFLVLSNFT-GY 147

Query: 145 IIASASVKEYLIWINAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKID 204
              +A +KEYLIW++AEKLVI F+P+ +SKFAFVNAIEVISAPKDLI DTA+FVNGD ++
Sbjct: 148 DNENARIKEYLIWVDAEKLVIGFIPSKRSKFAFVNAIEVISAPKDLIADTAQFVNGDSVE 207

Query: 205 NFDALSKQALEVMYRVNVGGPKVTPFNDTVWRTWLPDDEFLKSMRDQKRVYSTGRIWYQS 264
           NFD L+KQALEV+YRVNVGGPKVTPFND++WRTW+PD+EFLK      RVY++GRI YQ 
Sbjct: 208 NFDGLTKQALEVVYRVNVGGPKVTPFNDSLWRTWVPDEEFLKFSEGSSRVYTSGRIRYQM 267

Query: 265 GGASREIGPDNVYNTARVIAATNASIPNLNMTWEFPVIEGYKYLVRLHFCDIASISLGLL 324
           GGASRE+ PDNVYN+ARVI+++NA++PN N+TW F V+EGYKYLVR+HFCDIASI++GL+
Sbjct: 268 GGASREVCPDNVYNSARVISSSNATVPNHNITWGFDVVEGYKYLVRMHFCDIASIAIGLI 327

Query: 325 FFNVYVNGNLAYKDLDLSIVAGYSLASPFYADFVVDSYHSGVLSVSVGPSDKSLGYAVDG 384
           +FNV+V+G+L YKD+DLS +    L+SPFYADFVVD   SGVL+VSVGPS KS  YAVDG
Sbjct: 328 YFNVHVDGHLVYKDMDLSYITNEVLSSPFYADFVVDGDSSGVLTVSVGPSSKSFPYAVDG 387

Query: 385 ILNAVEIMKMNKSMGILDGELCAGLILKTWPRGNVGILVPLIAAVCVMLSLSVFKH-RTF 443
           ILN VEIMK+N SMG LDGE+    +LK WPRGN+G+ V L A+VC++L+ S+  H R  
Sbjct: 388 ILNGVEIMKLNNSMGSLDGEVSVEQVLKNWPRGNIGVSVALFASVCLLLTASLLMHRRRV 447

Query: 444 WFKNSVAWSKLPMDVSEITSKSGNQ 468
             K+SVAWS LPMD+S+   KS NQ
Sbjct: 448 GVKDSVAWSPLPMDISKGNLKSNNQ 472

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255541670|ref|XP_002511899.1| ATP binding protein, putative [Ricinus communis] gi|223549079|gb|EEF50568.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224130350|ref|XP_002320815.1| predicted protein [Populus trichocarpa] gi|222861588|gb|EEE99130.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449495325|ref|XP_004159800.1| PREDICTED: probable receptor-like protein kinase At5g24010-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297848346|ref|XP_002892054.1| hypothetical protein ARALYDRAFT_887290 [Arabidopsis lyrata subsp. lyrata] gi|297337896|gb|EFH68313.1| hypothetical protein ARALYDRAFT_887290 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357507443|ref|XP_003624010.1| hypothetical protein MTR_7g078220 [Medicago truncatula] gi|87162905|gb|ABD28700.1| ATP binding , related [Medicago truncatula] gi|124360477|gb|ABN08487.1| ATP binding , related [Medicago truncatula] gi|355499025|gb|AES80228.1| hypothetical protein MTR_7g078220 [Medicago truncatula] Back     alignment and taxonomy information
>gi|217075879|gb|ACJ86299.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|388510380|gb|AFK43256.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|334186242|ref|NP_001190642.1| fringe-related protein [Arabidopsis thaliana] gi|110737285|dbj|BAF00589.1| hypothetical protein [Arabidopsis thaliana] gi|332656452|gb|AEE81852.1| fringe-related protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449441618|ref|XP_004138579.1| PREDICTED: uncharacterized protein LOC101220661 [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query470
TAIR|locus:2126076785 AT4G00300 [Arabidopsis thalian 0.648 0.388 0.564 1.3e-84
TAIR|locus:2178707 824 AT5G24010 [Arabidopsis thalian 0.895 0.510 0.429 1.1e-80
TAIR|locus:2136338 878 AT4G39110 [Arabidopsis thalian 0.921 0.493 0.400 2.7e-68
TAIR|locus:2050080 871 AT2G21480 [Arabidopsis thalian 0.908 0.490 0.401 1.3e-66
TAIR|locus:2075346 830 HERK1 "hercules receptor kinas 0.917 0.519 0.375 1.2e-63
TAIR|locus:2163158 842 AT5G61350 [Arabidopsis thalian 0.925 0.516 0.369 4.2e-63
TAIR|locus:2174249 829 AT5G59700 [Arabidopsis thalian 0.9 0.510 0.370 1.6e-61
TAIR|locus:2151349 855 THE1 "THESEUS1" [Arabidopsis t 0.855 0.470 0.361 3.1e-60
TAIR|locus:2204564 849 HERK2 "hercules receptor kinas 0.827 0.458 0.322 1.3e-44
TAIR|locus:2058636 834 AT2G23200 [Arabidopsis thalian 0.853 0.480 0.326 6.8e-44
TAIR|locus:2126076 AT4G00300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
 Identities = 180/319 (56%), Positives = 225/319 (70%)

Query:   162 KLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVN 221
             K+VI F+P+  S FAFVNAIEVISAPKDLI D A  V+ D  + F+ L+KQA+EV+YRVN
Sbjct:   467 KVVIRFVPSKDSNFAFVNAIEVISAPKDLIGDVATSVSHDGTEKFNGLAKQAMEVVYRVN 526

Query:   222 VGGPKVTPFNDTVWRTWLPDDEFLKSMR-DQKRVYSTGRIWYQSGGASREIGPDNVYNTA 280
             VGG KVTPFNDT+WRTW+ D+ FLK+     ++ Y TGRI Y+ GGASRE+GPDNVYNTA
Sbjct:   527 VGGRKVTPFNDTLWRTWVTDEGFLKTGDGSSEKSYFTGRIKYRRGGASREVGPDNVYNTA 586

Query:   281 RVIAATNASIPNLNMTWEFPVIEGYKYLVRLHFCDIASISLGLLFFNVYVNGNLAYKDLD 340
             RV   +N  +   +M+W F V  GYKYL+R+HFCDIAS SLG L+FNVY+NGNLAY+D D
Sbjct:   587 RVGKRSNGLV---DMSWGFKVNVGYKYLIRMHFCDIASKSLGRLYFNVYINGNLAYEDFD 643

Query:   341 LSIVAGYSLASPFYADFVVDSYH-----SGV-LSVSVGPSDKSL--GYAVDGILNAVEIM 392
             +S  A   LASP+Y DFVVD+       SG  ++VSVGPS+K+   G  VD ILN VEIM
Sbjct:   644 ISYAADNVLASPYYIDFVVDATADDNNPSGSSITVSVGPSNKTSVDGNGVDAILNGVEIM 703

Query:   393 KMNKSMGILDGELCAGLILKTWP-RGNVGILVPLIAAVCVMLSLSVFKHRTFWFKNSVAW 451
             KMN SMG LDG +   +IL T P R N+ I + ++A +C+ +S  +   R    K+   W
Sbjct:   704 KMNNSMGSLDGYVSTEMILSTCPNRRNLSIFIAMLAFMCIFMSFYIVTQRKR-VKDQYGW 762

Query:   452 SKLPMDVSEITSKSGNQHT 470
             +KL MDV E  SKSGNQ T
Sbjct:   763 TKLSMDVLEDNSKSGNQFT 781
GO:0005576 "extracellular region" evidence=ISM
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2178707 AT5G24010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136338 AT4G39110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050080 AT2G21480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075346 HERK1 "hercules receptor kinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163158 AT5G61350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174249 AT5G59700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151349 THE1 "THESEUS1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2204564 HERK2 "hercules receptor kinase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2058636 AT2G23200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00026927001
SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (475 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query470
pfam12819335 pfam12819, Malectin_like, Carbohydrate-binding pro 3e-52
pfam11721164 pfam11721, Malectin, Di-glucose binding within end 3e-10
pfam11721164 pfam11721, Malectin, Di-glucose binding within end 9e-05
>gnl|CDD|221790 pfam12819, Malectin_like, Carbohydrate-binding protein of the ER Back     alignment and domain information 
 Score =  179 bits (455), Expect = 3e-52
 Identities = 86/373 (23%), Positives = 146/373 (39%), Gaps = 51/373 (13%)

Query: 35  IDCGSTVDTTV----DNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARVF 90
           IDCG   + +         ++SD+          + +S +I   + +  L + Y + R F
Sbjct: 1   IDCGLPSNESYTDPSTGITWVSDAG------FIDTGKSGNISKENSSSFLSKPYKTLRSF 54

Query: 91  DRPSR--YIFKIRD--KGTHMVRLHFYQLNSSQF--VSDDAQFHVLVNGYVVLSNFSVGN 144
               R  Y   +       +++R  F   N      VS    F + +   +  +     +
Sbjct: 55  PDGKRNCYTLPVTPGKGTKYLIRATFLYGNYDGLNSVSSPPSFDLYLGVNLWTTVNLSND 114

Query: 145 IIASASVKEYLIWI-NAEKLVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKI 203
              S  VKEY+I +  ++ L +  + T  +   F++A+E+   P  L   +         
Sbjct: 115 SGDS-VVKEYIIHVTKSDTLSVCLVNT-GTGTPFISALELRPLPDSLYPSS--------- 163

Query: 204 DNFDALSKQALEVMYRVNVG--GPKVTPFNDTVWRTWLPDDEFLKSMRDQKRVYSTGRIW 261
                   QAL+++ R+N G     +   +D   R W P               ST    
Sbjct: 164 -----GGSQALKLVARLNFGGSEGTIRYPDDVYDRIWEPFFSSPGW-----SQISTSLSV 213

Query: 262 YQSGGASREIGPDNVYNTARVIAATNASIPNLNMTWEFPVIEGYKYLVRLHFCDIASISL 321
             S   +  I P  V  TA      +A    LN TW+  V   ++Y V LHF +I   SL
Sbjct: 214 DISSNNAPYIPPSAVLQTAVTPTNASA---PLNFTWDL-VDPNFEYYVYLHFAEI--QSL 267

Query: 322 GLLFFNVYVNGNLAYKDLDLSIVAGYSLASPFYADFVVDSYHSGVLSVSVGPSDKSLGYA 381
               F++Y+NG   Y D+        +     Y DF V+    G+L++S+ P+  S    
Sbjct: 268 ETREFDIYINGKTVYGDVS--PKYLGTDTGALYLDFPVNVSGGGLLNISLVPTSGS---T 322

Query: 382 VDGILNAVEIMKM 394
           +  +LNA+EI K+
Sbjct: 323 LPPLLNALEIFKV 335

Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. Length = 335
>gnl|CDD|221187 pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum Back     alignment and domain information
>gnl|CDD|221187 pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 470
PLN03150 623 hypothetical protein; Provisional 100.0
PF12819347 Malectin_like: Carbohydrate-binding protein of the 100.0
PF11721174 Malectin: Di-glucose binding within endoplasmic re 99.89
PF11721174 Malectin: Di-glucose binding within endoplasmic re 99.85
PLN03150623 hypothetical protein; Provisional 99.8
PF12819347 Malectin_like: Carbohydrate-binding protein of the 99.55
KOG3593355 consensus Predicted receptor-like serine/threonine 97.81
KOG3593355 consensus Predicted receptor-like serine/threonine 97.06
>PLN03150 hypothetical protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.2e-62  Score=536.39  Aligned_cols=343  Identities=21%  Similarity=0.260  Sum_probs=271.2

Q ss_pred             HHHHHHHHhhhcccccCCCceEEEccCCCCccC--CCCCccccCccccccCceeecCCcceeeccCCCCCCchhccceee
Q 043030           12 LLLLSLSSFYGIALSFSPADDYLIDCGSTVDTT--VDNRLFISDSSRASSHLLTFSTRSKSIQLSHRNGKLPEIYNSARV   89 (470)
Q Consensus        12 ~~~~~~~~~~~~~~~~~p~~~~~InCG~~~~~~--~~gr~w~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lY~TaR~   89 (470)
                      |+++.+++++..++...+++.|+||||++.+.+  .+||+|++|.      .|. .+......  .++ ...++|+|+|+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~I~CGs~~~~~~d~~~~~w~~D~------~~~-~~~~~~~~--~~~-~~~~~~~t~R~   74 (623)
T PLN03150          5 LLAASALLAVLASLASPEPFTMRISCGARVNVRTAPTNTLWYKDF------AYT-GGIPANAT--RPS-FIAPPLKTLRY   74 (623)
T ss_pred             HHHHHHHHHhhcccccCCCccEEEeCCCCCCcccCCCCCEEcCCc------ccc-cCcccccc--Ccc-cccchhhcccc
Confidence            455555555555555556789999999998763  5799999995      343 22222111  222 23568999999


Q ss_pred             cCC----CCeEEEecCCCceEEEEEEEeeccCCCCCCCCceEEEEECC---EEEEEeeeccccccceEEEEEEEEeeCCe
Q 043030           90 FDR----PSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNG---YVVLSNFSVGNIIASASVKEYLIWINAEK  162 (470)
Q Consensus        90 f~~----~~~Y~f~v~~~G~y~VRLhF~~~~y~~~d~~~~~FdV~i~g---~~ll~~f~~~~~~~~~~~kEf~v~v~~~~  162 (470)
                      |+.    ++||+||+.++|+|+|||||++..|++++ ..+.|||++|+   .+++.+|+.   ....++|||++.++++.
T Consensus        75 F~~~~g~~~cY~~~~~~~g~ylVRl~F~~~~y~~~~-~~~~Fdv~~~~~~~~tv~~~~~~---~~~~v~~E~i~~~~~~~  150 (623)
T PLN03150         75 FPLSDGPENCYNINRVPKGHYSVRVFFGLVAEPNFD-SEPLFDVSVEGTQISSLKSGWSS---HDEQVFAEALVFLTDGS  150 (623)
T ss_pred             CCcccccccceEeeecCCCcEEEEEEeecCCcCCCC-CCCceEEEECcEEEEEEecCccc---CCCcEEEEEEEEecCCc
Confidence            995    68999998778999999999877766665 56899999999   667777763   24579999999999999


Q ss_pred             EEEEEEeCCCCCceEEEEeeecccCCcccccccccccCCCCCcccccchhhheeeEEEecCCCC----ccCCCCCC--CC
Q 043030          163 LVIAFLPTMKSKFAFVNAIEVISAPKDLILDTAKFVNGDKIDNFDALSKQALEVMYRVNVGGPK----VTPFNDTV--WR  236 (470)
Q Consensus       163 L~I~f~p~~~~~~aFINaIEI~~~p~~l~~~~~~~v~~~~~~~~~~~~~~al~t~~RiNvGg~~----i~~~~Dt~--~R  236 (470)
                      |.|||+| .+.++||||||||+++|+++|...     +.      +..+.+|+++||+||||+.    +++++|.+  ||
T Consensus       151 l~vcf~~-~~~~~pFIs~iEv~~l~~~~y~~~-----~~------~~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR  218 (623)
T PLN03150        151 ASICFHS-TGHGDPAILSIEILQVDDKAYNFG-----PS------WGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDR  218 (623)
T ss_pred             EEEEEec-CCCCCCceeEEEEEEcCccccccc-----cc------ccCceEEEEEEEEEecCcccccccCCCCCcccCcc
Confidence            9999999 567999999999999999998421     10      0135679999999999974    57788886  99


Q ss_pred             CCCCCCccccccCcceeeecceeeeecCCCCCCCCCcHHHHHhhhccccCCCCCCCcceEEEeeccCCCeEEEEEEeeec
Q 043030          237 TWLPDDEFLKSMRDQKRVYSTGRIWYQSGGASREIGPDNVYNTARVIAATNASIPNLNMTWEFPVIEGYKYLVRLHFCDI  316 (470)
Q Consensus       237 ~W~~D~~y~~~~~~~~~~~~~~~i~~~~~~~~~~~aP~~VY~TAr~~~~~~~~~~~~nltw~f~V~~g~~Y~VrLHF~Ei  316 (470)
                      +|.+|++|+.+.  +..+++...|+++  ..+++.+|+.||||||++..+     ..+++|.|+|++++.|+|||||||+
T Consensus       219 ~W~~d~~~~~~~--~~~~st~~~I~~~--~~~~~~~P~~VyqTA~~~~~~-----~~~lty~~~v~~~~~Y~VrLhFaEi  289 (623)
T PLN03150        219 FWNRMQTFGSGS--DQAISTENVIKKA--SNAPNFYPESLYQSALVSTDT-----QPDLSYTMDVDPNRNYSVWLHFAEI  289 (623)
T ss_pred             ccCcCcccCCCc--ccccccccccccc--cCCCccChHHHhhhhccccCC-----CCceEEEeecCCCCCEEEEEEEEec
Confidence            999999887443  2344556667765  246889999999999998642     2579999999999999999999999


Q ss_pred             cc--CCCCeEEEEEEECCEEeccCcchhhhcccCCCcceEEEEEEEecCCceEEEEEEecCCCCCCCccceeeEEEEEee
Q 043030          317 AS--ISLGLLFFNVYVNGNLAYKDLDLSIVAGYSLASPFYADFVVDSYHSGVLSVSVGPSDKSLGYAVDGILNAVEIMKM  394 (470)
Q Consensus       317 ~~--~~~~~R~F~VyIng~~~~~~~Di~~~~~~~~~~p~~~d~vv~~~~~g~L~Is~~p~~~s~~~~~~aiLNgiEI~k~  394 (470)
                      +.  ...++|+|||||||+.+++++||..+++ +...|++++|.+.+. ++.|+|+|+|...   .  +||||||||||+
T Consensus       290 ~~~~~~~~~R~F~V~ing~~~~~~~di~~~~g-~~~~~~~~~~~v~~~-~g~l~isl~p~~~---s--~pilNaiEI~~~  362 (623)
T PLN03150        290 DNSITAEGKRVFDVLINGDTAFKDVDIVKMSG-ERYTALVLNKTVAVS-GRTLTIVLQPKKG---T--HAIINAIEVFEI  362 (623)
T ss_pred             cCccCCCceEEEEEEECCEEeecccChhhhcC-CcccceEEEeEEeec-CCeEEEEEeeCCC---C--cceeeeeeeeec
Confidence            73  3568999999999999999999998876 566899999999874 4789999999763   2  799999999999


Q ss_pred             ec
Q 043030          395 NK  396 (470)
Q Consensus       395 ~~  396 (470)
                      ..
T Consensus       363 ~~  364 (623)
T PLN03150        363 IT  364 (623)
T ss_pred             cc
Confidence            65

>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] Back     alignment and domain information
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan Back     alignment and domain information
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan Back     alignment and domain information
>PLN03150 hypothetical protein; Provisional Back     alignment and domain information
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] Back     alignment and domain information
>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms] Back     alignment and domain information
>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query470
2jwp_A174 Malectin, MGC80075; sugar binding, sugar binding p 9e-31
2jwp_A174 Malectin, MGC80075; sugar binding, sugar binding p 3e-21
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174 Back     alignment and structure
 Score =  116 bits (291), Expect = 9e-31
 Identities = 40/192 (20%), Positives = 64/192 (33%), Gaps = 35/192 (18%)

Query: 213 ALEVMYRVNVGGPKVTPFNDTVWRTWLPDDEFLKSMRDQKRVYSTGRIWYQSGGASREIG 272
           A +V++ VN GG       D     +  D                GR             
Sbjct: 3   ADKVIWAVNAGGESHV---DVHGIHYRKDPLE----------GRVGRASDYGMKLPILRS 49

Query: 273 ---PDNVYNTARVIAATNASIPNLNMTWEFPVIEGYKYLVRLHFCDIASISLGLLFFNVY 329
                 +Y T R            +  ++ P+ E  +Y++ L F ++         F+V 
Sbjct: 50  NPEDQVLYQTERYN--------EDSFGYDIPIKEEGEYVLVLKFAEVYFAQSQQKVFDVR 101

Query: 330 VNGNLAYKDLDLSIVAGYSLASPFYADFVVDSYHSGVLSVSVGPSDKSLGYAVDG----- 384
           VNG+   KDLD+    G+S A        +     G LSV    S  +   +V+      
Sbjct: 102 VNGHTVVKDLDIFDRVGHSTAHDEIIPISIK---KGKLSVQGEVSTFTGKLSVEFVKGYY 158

Query: 385 ---ILNAVEIMK 393
               + A+ IMK
Sbjct: 159 DNPKVCALFIMK 170
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query470
2jwp_A174 Malectin, MGC80075; sugar binding, sugar binding p 100.0
2jwp_A174 Malectin, MGC80075; sugar binding, sugar binding p 99.97
2w47_A144 Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1. 93.06
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 91.66
2vzp_A127 Aocbm35, EXO-beta-D-glucosaminidase; family 35, CS 91.08
2w3j_A145 Carbohydrate binding module; sugar-binding protein 90.28
2w47_A144 Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1. 90.12
2vzp_A127 Aocbm35, EXO-beta-D-glucosaminidase; family 35, CS 87.61
2w3j_A145 Carbohydrate binding module; sugar-binding protein 86.83
2wz8_A156 Cellulosome protein dockerin type I; sugar binding 82.6
2w87_A139 Esterase D, XYL-CBM35; plant cell WALL degradation 82.26
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Back     alignment and structure
Probab=100.00  E-value=1.9e-34  Score=266.51  Aligned_cols=155  Identities=22%  Similarity=0.222  Sum_probs=124.0

Q ss_pred             eeeEEEecCCCCccCCCCCCCCCCCCCCccccccCcceeeecceeeeecCCCCCCCCCcHHHHHhhhccccCCCCCCCcc
Q 043030          215 EVMYRVNVGGPKVTPFNDTVWRTWLPDDEFLKSMRDQKRVYSTGRIWYQSGGASREIGPDNVYNTARVIAATNASIPNLN  294 (470)
Q Consensus       215 ~t~~RiNvGg~~i~~~~Dt~~R~W~~D~~y~~~~~~~~~~~~~~~i~~~~~~~~~~~aP~~VY~TAr~~~~~~~~~~~~n  294 (470)
                      |++|||||||+.++   |..+|+|.+|..|....... .  ....+.+.    ..+++|+.||||||.+..        +
T Consensus         5 ~~~~~INcGg~~~~---d~~gr~w~~D~~~~~~g~~~-~--~~~~~~~~----~~~~~~~~lY~TaR~~~~--------~   66 (174)
T 2jwp_A            5 KVIWAVNAGGESHV---DVHGIHYRKDPLEGRVGRAS-D--YGMKLPIL----RSNPEDQVLYQTERYNED--------S   66 (174)
T ss_dssp             HEEEEEEETSSSEE---ETTTEEECSSCSSTTCCCCC-C--CCTTSCCS----SSCHHHHHTTTCCCCCCS--------C
T ss_pred             cEEEEEECCCCCcc---CCCCCEEcCCcCcccCCccc-c--cccceEec----ccCCCCchhhhhhccCCC--------C
Confidence            68999999999864   56899999998775322110 0  01111111    246788999999999653        6


Q ss_pred             eEEEeeccCCCeEEEEEEeeecccCCCCeEEEEEEECCEEeccCcchhhhcccCCCcceEEEEEEEe------------c
Q 043030          295 MTWEFPVIEGYKYLVRLHFCDIASISLGLLFFNVYVNGNLAYKDLDLSIVAGYSLASPFYADFVVDS------------Y  362 (470)
Q Consensus       295 ltw~f~V~~g~~Y~VrLHF~Ei~~~~~~~R~F~VyIng~~~~~~~Di~~~~~~~~~~p~~~d~vv~~------------~  362 (470)
                      ++|.|||+++|+|+|||||||+...+.++|+|||||||++++++|||.+++| + .+|++++|.+++            .
T Consensus        67 ~tY~f~v~~~G~Y~VrLhF~ei~~~~~~~rvFdV~ing~~~l~~fdi~~~ag-~-~~~~~~~~~~~v~~~~l~i~~~~~~  144 (174)
T 2jwp_A           67 FGYDIPIKEEGEYVLVLKFAEVYFAQSQQKVFDVRVNGHTVVKDLDIFDRVG-H-STAHDEIIPISIKKGKLSVQGEVST  144 (174)
T ss_dssp             EEEEEECCSCEEEEEEEEEECCSCCCSSSSCEEEEETTEEEEEEECHHHHHS-S-SSCEEEEEEEEEETTEEEETTEEEE
T ss_pred             eEEEEEeCCCeEEEEEEEEeccccCCCCCeEeEEEECCEEeecCcCHHHhhC-C-CeeEEEEEEEEEecCceeeeeeecc
Confidence            9999999988899999999999988899999999999999999999999997 4 689999998864            2


Q ss_pred             CCceEEEEEEecCCCCCCCccceeeEEEEEee
Q 043030          363 HSGVLSVSVGPSDKSLGYAVDGILNAVEIMKM  394 (470)
Q Consensus       363 ~~g~L~Is~~p~~~s~~~~~~aiLNgiEI~k~  394 (470)
                      .++.|+|+|+|...   .  +|+||||||+|-
T Consensus       145 ~~g~L~I~f~p~~~---~--~a~inaIEI~~~  171 (174)
T 2jwp_A          145 FTGKLSVEFVKGYY---D--NPKVCALFIMKG  171 (174)
T ss_dssp             CCSEEEEEEECSSS---C--SSSEEEEEEESS
T ss_pred             cCCeEEEEEeccCC---C--CcEEEEEEEEeC
Confidence            46789999998632   2  899999999984
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Back     alignment and structure
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A* Back     alignment and structure
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium} Back     alignment and structure
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A Back     alignment and structure
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A* Back     alignment and structure
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium} Back     alignment and structure
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum} Back     alignment and structure
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query470
d2o14a1146 Hypothetical protein YxiM {Bacillus subtilis [TaxI 98.46
d2o14a1146 Hypothetical protein YxiM {Bacillus subtilis [TaxI 97.89
>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: YxiM N-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=98.46  E-value=1.7e-06  Score=74.76  Aligned_cols=90  Identities=10%  Similarity=0.136  Sum_probs=69.9

Q ss_pred             hccceeecCCCCeEEEecCCCceEEEEEEEeeccCCCCCCCCceEEEEECCEEEEEeeeccccccceEEEEEEEEeeCCe
Q 043030           83 IYNSARVFDRPSRYIFKIRDKGTHMVRLHFYQLNSSQFVSDDAQFHVLVNGYVVLSNFSVGNIIASASVKEYLIWINAEK  162 (470)
Q Consensus        83 lY~TaR~f~~~~~Y~f~v~~~G~y~VRLhF~~~~y~~~d~~~~~FdV~i~g~~ll~~f~~~~~~~~~~~kEf~v~v~~~~  162 (470)
                      +++..++ +....|.++| ++|.|.|+++|.+         ....+|.+.|...+.++.     .....+.|.|+|++++
T Consensus        55 ~~~~~~~-~~~~~f~v~v-PnG~Y~Vtv~~Gd---------~~~~~~~~eg~~~~~~~~-----g~~~~~~~~V~VtDG~  118 (146)
T d2o14a1          55 EFLAYGT-KSNNTFNVDL-PNGLYEVKVTLGN---------TARASVAAEGVFQVINMT-----GDGAEDTFQIPVTDGQ  118 (146)
T ss_dssp             EESSCST-TCSCCEEEEC-CSEEEEEEEEESS---------CSEEEEEETTEEEEEEEE-----STTCEEEEEEEECSSE
T ss_pred             hhccccc-CCCceEEEEC-CCCeEEEEEEEec---------CCCccEEEeeEEeccccC-----CccEEEEEEEEEECCe
Confidence            3344443 2346899999 5999999999953         235689999988887763     3556788999999999


Q ss_pred             EEEEEEeCCCCCceEEEEeeecccCC
Q 043030          163 LVIAFLPTMKSKFAFVNAIEVISAPK  188 (470)
Q Consensus       163 L~I~f~p~~~~~~aFINaIEI~~~p~  188 (470)
                      |+|.|.....+..|-||+|||.++++
T Consensus       119 L~l~ft~~~~G~~~~in~l~I~~~~d  144 (146)
T d2o14a1         119 LNLLVTEGKAGTAFTLSALKIKKLSD  144 (146)
T ss_dssp             EEEEEEESSTTSCCEEEEEEEEEEES
T ss_pred             EEEEEecCCCCCccEEEEEEEEeccc
Confidence            99999863446789999999998775
>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure