Citrus Sinensis ID: 043079

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460
MDKAQIPLPTFTILLLVVVSISLIHGSEGSIGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYLTKLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHTALVGVSLDRRIQVSTPHSLGILSSSSPPSSGKFHQGYDIHVLKPLLSFLRATKSPFLINPYPFFGCSPETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIAETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQGPTCERNFGLFHPNMTPVYDVGILRSTARSSIPTSNPTPKVETPQRAPEGKRWCVPKTGADIEALQRNIDYVCGMGFNCEAIQEGGSCFLPNTVRAHAAYAMNVYYQAMGRHDYACDFIQTGAVTDLDPSYGKCKY
cccccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHccccEEEEccccHHHHHHHHccccEEEEEcccccHHHcccHHHHHHHHHHccccccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEccccccccccccccccccccccccEEcccccEEEEcccccccHHHHHHHHccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEcccccccccccccEEEEEcccccEEEEEEEccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccEEEEccccccccccc
ccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccHHHHHHHHHHHccccEEEEEcccHHHHHHHHccccEEEEEEccHHHHHHccHHHHHHHHHHHccccccccEEEEEEEccHHccccccHHHHHHHHHHHHHHHHHHHccccccEEEccHHHHHHHccccccccccccHcHHHHHHHHHHHHHHHccccEEEEccccEccccccHHHHcccccccEEccccccEEccHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEccEccccccccHHHHccccEcccccEccccEcccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccEEEEEEcccccccccc
mdkaqiplptFTILLLVVVSISLihgsegsigvnygtvannlpppthVAHFLLESTIINrvrlfdadpKMIRAFAHTGIAVtvtvpndqipyltkLNFAEQWLKnniqpytpatniVRIFVGNEILSTASKLLIASLVPAMQTLHTALVGVsldrriqvstphslgilssssppssgkfhqgydihvLKPLLSFLratkspflinpypffgcspetldyalfrpnsgvfdentKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIAetgwpskgdssqvgvdsqsaaDYNMNLMRhvtsgngtplmpnrtFETYIFALFNedlkqgptcernfglfhpnmtpvydvgilrstarssiptsnptpkvetpqrapegkrwcvpktgaDIEALQRNIDYVCgmgfnceaiqeggscflpntVRAHAAYAMNVYYQAmgrhdyacdfiqtgavtdldpsygkcky
mdkaqiplPTFTILLLVVVSISLIHGSEGSIGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYLTKLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHTALVGVSLDRRIQVSTPHSLGILSSSSPPSSGKFHQGYDIHVLKPLLSFLRATKSPFLINPYPFFGCSPETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIAEtgwpskgdssqVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQGPTCERNFGLFHPNMTPVYDVGILRSTArssiptsnptpkvetpqrapegkrwcvPKTGADIEALQRNIDYVCGMGFNCEAIQEGGSCFLPNTVRAHAAYAMNVYYQAMGRHDYACDFIQTgavtdldpsygkcky
MDKAQIPLPTFTilllvvvsisliHGSEGSIGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYLTKLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHTALVGVSLDRRIQVSTPHslgilssssppssgKFHQGYDIHVLKPLLSFLRATKSPFLINPYPFFGCSPETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIAETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQGPTCERNFGLFHPNMTPVYDVGILRSTARSSIPTSNPTPKVETPQRAPEGKRWCVPKTGADIEALQRNIDYVCGMGFNCEAIQEGGSCFLPNTVRAHAAYAMNVYYQAMGRHDYACDFIQTGAVTDLDPSYGKCKY
*****IPLPTFTILLLVVVSISLIHGSEGSIGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYLTKLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHTALVGVSLDRRIQVS******************FHQGYDIHVLKPLLSFLRATKSPFLINPYPFFGCSPETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIAETGW**************************V*****TPLMPNRTFETYIFALFNEDLKQGPTCERNFGLFHPNMTPVYDVGILR**************************RWCVPKTGADIEALQRNIDYVCGMGFNCEAIQEGGSCFLPNTVRAHAAYAMNVYYQAMGRHDYACDFIQTGAVTDL*********
************ILLLVVVSISLIHGSEGSIGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYLTKLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHTALVGVSLDRRIQVSTPHSLGILSSSSPPSSGKFHQGYDIHVLKPLLSFLRATKSPFLINPYPFFGCSPETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIAETGWPSKGDSSQVGVDSQSAADYNMNLMRHV***********RTFETYIFALFNEDLK***TCERNFGLFHPNMTPVYDVGILRST************************************ALQRNIDYVCGMGFNCEAIQEGGSCFLPNTVRAHAAYAMNVYYQAMGRHDYACDFIQTGAVTDLDPSYGKCKY
MDKAQIPLPTFTILLLVVVSISLIHGSEGSIGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYLTKLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHTALVGVSLDRRIQVSTPHSLGIL**********FHQGYDIHVLKPLLSFLRATKSPFLINPYPFFGCSPETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIAETGWP***********SQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQGPTCERNFGLFHPNMTPVYDVGILRSTARSS*******************KRWCVPKTGADIEALQRNIDYVCGMGFNCEAIQEGGSCFLPNTVRAHAAYAMNVYYQAMGRHDYACDFIQTGAVTDLDPSYGKCKY
***AQIPLPTFTILLLVVVSISLIHGSEGSIGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYLTKLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHTALVGVSLDRRIQVSTPHSLGILSSSSPPSSGKFHQGYDIHVLKPLLSFLRATKSPFLINPYPFFGCSPETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIAETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQGPTCERNFGLFHPNMTPVYDVGILR**********************PEGKRWCVPKTGADIEALQRNIDYVCGMGFNCEAIQEGGSCFLPNTVRAHAAYAMNVYYQAMGRHDYACDFIQTGAVTDLDPSYGKCKY
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDKAQIPLPTFTILLLVVVSISLIHGSEGSIGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYLTKLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHTALVGVSLDRRIQVSTPHSLGILSSSSPPSSGKFHQGYDIHVLKPLLSFLRATKSPFLINPYPFFGCSPETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIAETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQGPTCERNFGLFHPNMTPVYDVGILRSTARSSIPTSNPTPKVETPQRAPEGKRWCVPKTGADIEALQRNIDYVCGMGFNCEAIQEGGSCFLPNTVRAHAAYAMNVYYQAMGRHDYACDFIQTGAVTDLDPSYGKCKY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query460 2.2.26 [Sep-21-2011]
P52409461 Glucan endo-1,3-beta-gluc N/A no 0.930 0.928 0.518 1e-125
Q94G86460 Glucan endo-1,3-beta-D-gl N/A no 0.923 0.923 0.457 1e-111
Q9M069504 Glucan endo-1,3-beta-gluc no no 0.943 0.861 0.484 1e-111
Q9ZU91501 Glucan endo-1,3-beta-gluc no no 0.893 0.820 0.433 2e-93
O65399511 Glucan endo-1,3-beta-gluc no no 0.889 0.800 0.397 1e-83
Q9FJU9506 Glucan endo-1,3-beta-gluc no no 0.915 0.832 0.399 4e-83
Q8VYE5534 Glucan endo-1,3-beta-gluc no no 0.956 0.823 0.372 2e-81
Q9C7U5505 Glucan endo-1,3-beta-gluc no no 0.897 0.817 0.386 1e-80
Q9ZQG9392 Glucan endo-1,3-beta-gluc no no 0.684 0.803 0.459 6e-79
Q94CD8505 Glucan endo-1,3-beta-gluc no no 0.895 0.815 0.375 3e-78
>sp|P52409|E13B_WHEAT Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1 Back     alignment and function desciption
 Score =  449 bits (1154), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/436 (51%), Positives = 297/436 (68%), Gaps = 8/436 (1%)

Query: 31  IGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQI 90
           IGVNYG  A+NLP PT VA FL   T I+RV+LFDA+P  I AFA T I++ V++PN  +
Sbjct: 26  IGVNYGANADNLPSPTSVATFLATKTTIDRVKLFDANPTFISAFAGTPISLAVSLPNSAL 85

Query: 91  PYL----TKLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHT 146
           P L    T L+ A  W++ N+ PY PATN+  +  GNEIL +    LI SL+PAM+ L  
Sbjct: 86  PALADKATGLDAARSWIRANLSPYVPATNVTLLLAGNEILLSTDTNLILSLLPAMRRLAQ 145

Query: 147 ALVGVSLDRRIQVSTPHSLGILS-SSSPPSSGKFHQGYDIHVLKPLLSFLRATKSPFLIN 205
           AL    L   ++V+TPH LGIL+ S   PS+  F  GY+  +   +L F R T SPF++N
Sbjct: 146 ALKAEGL-TGVRVTTPHYLGILAPSDGIPSNASFRAGYNTKLFPAMLQFHRDTGSPFMVN 204

Query: 206 PYPFFGCSPETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIA 265
           PYP+F   PETL+YALFRPNSG++D  TK+ YT+MLD Q+DA+++AMK LG+ DV+I + 
Sbjct: 205 PYPYFSYRPETLNYALFRPNSGIYDPATKLNYTSMLDAQMDAIYTAMKKLGYGDVDIAVG 264

Query: 266 ETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQG 325
           E GWP++ +  Q+GV  Q A D+N  ++R  +SG GTPLMPNRTFETY+F+LF+E+ K G
Sbjct: 265 EAGWPTQAEPGQIGVGVQEARDFNEGMIRVCSSGKGTPLMPNRTFETYLFSLFDENQKPG 324

Query: 326 PTCERNFGLFHPNMTPVYDVGILRSTAR-SSIPTSNPTPKVETPQRAPEGKRWCVPKTGA 384
           P  ER+FGLF+P+ TPVYD+G+LR  A  +  P+ NP+P          G +WCV K GA
Sbjct: 325 PIAERHFGLFNPDFTPVYDLGLLRDGASVAPTPSPNPSPNPSPKPAPSGGGKWCVAKDGA 384

Query: 385 DIEALQRNIDYVCGMGFNCEAIQEGGSCFLPNTVRAHAAYAMNVYYQAMGRHDYACDFIQ 444
           +   LQ NI+Y CG   +C+ IQ GG+CF PN+++AHA+Y MN YYQA G  D ACDF  
Sbjct: 385 NGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKG 443

Query: 445 TGAVTDLDPSYGKCKY 460
           TG VT  DPSYG CKY
Sbjct: 444 TGIVTSSDPSYGGCKY 459
Is thought to be an important plant defense-related product against fungal pathogens.
Triticum aestivum (taxid: 4565)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 9
>sp|Q94G86|ALL9_OLEEU Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1 Back     alignment and function description
>sp|Q9M069|E137_ARATH Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2 Back     alignment and function description
>sp|Q9ZU91|E133_ARATH Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2 Back     alignment and function description
>sp|O65399|E131_ARATH Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3 Back     alignment and function description
>sp|Q9FJU9|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1 Back     alignment and function description
>sp|Q8VYE5|E1312_ARATH Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1 Back     alignment and function description
>sp|Q9C7U5|E132_ARATH Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2 Back     alignment and function description
>sp|Q9ZQG9|E1314_ARATH Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500 PE=1 SV=2 Back     alignment and function description
>sp|Q94CD8|E134_ARATH Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query460
255570591476 Glucan endo-1,3-beta-glucosidase precurs 0.986 0.953 0.729 0.0
302143931461 unnamed protein product [Vitis vinifera] 0.969 0.967 0.729 0.0
224120870463 predicted protein [Populus trichocarpa] 0.971 0.965 0.716 0.0
359490812 874 PREDICTED: glucan endo-1,3-beta-glucosid 0.965 0.508 0.703 0.0
224132710419 predicted protein [Populus trichocarpa] 0.904 0.992 0.761 0.0
449456419497 PREDICTED: glucan endo-1,3-beta-glucosid 0.980 0.907 0.673 0.0
79328626458 O-Glycosyl hydrolases family 17 protein 0.976 0.980 0.657 0.0
297812609443 hydrolase, hydrolyzing O-glycosyl compou 0.952 0.988 0.659 1e-179
186525331452 O-Glycosyl hydrolases family 17 protein 0.963 0.980 0.657 1e-179
116787932485 unknown [Picea sitchensis] 0.969 0.919 0.578 1e-154
>gi|255570591|ref|XP_002526252.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gi|223534417|gb|EEF36121.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/466 (72%), Positives = 397/466 (85%), Gaps = 12/466 (2%)

Query: 1   MDKAQIPLPTFTILLLVVVSISLIHGSEGSIGVNYGTVANNLPPPTHVAHFLLESTIINR 60
           M++    L    +  ++ +  ++I G+EG++GVNYGTVANNLPPP  VA+FL+ESTIINR
Sbjct: 1   MERESAALYASMVTAILFLQSTIIPGAEGTLGVNYGTVANNLPPPAQVANFLVESTIINR 60

Query: 61  VRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYLTKLNFAEQWLKNNIQPYTPATNIVRIF 120
           VRLFD + ++++AFAHTGI VTVTVPNDQIP LTKLNFA+QW+K+NIQPY PATNI+RI 
Sbjct: 61  VRLFDTNREILQAFAHTGIEVTVTVPNDQIPRLTKLNFAQQWVKSNIQPYVPATNIIRIL 120

Query: 121 VGNEILSTASKLLIASLVPAMQTLHTALVGVSLDRRIQVSTPHSLGILSSSSPPSSGKFH 180
           VGNE++STA+K+LIA LVPAMQTLHTALVG SLDR+I+VSTPHSLGILS+SSPPS+GKF 
Sbjct: 121 VGNEVISTANKMLIAGLVPAMQTLHTALVGASLDRKIKVSTPHSLGILSTSSPPSTGKFR 180

Query: 181 QGYDIHVLKPLLSFLRATKSPFLINPYPFFGCSPETLDYALFRPNSGVFDENTKIVYTNM 240
           QGYD+HVLKPLLSFLR T SPF+INPYPFFGCSP+TLDYALFRPN+GV D+NTK++YTNM
Sbjct: 181 QGYDVHVLKPLLSFLRDTNSPFMINPYPFFGCSPDTLDYALFRPNAGVMDDNTKLMYTNM 240

Query: 241 LDGQLDAVFSAMKLLGFDDVEIVIAETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGN 300
           LDGQLDAVFSA+KLLGF D++IVIAETGWPSKGDS Q+GVD+ SAA YN NLM+HVTSG+
Sbjct: 241 LDGQLDAVFSAIKLLGFTDIDIVIAETGWPSKGDSLQLGVDADSAAHYNGNLMKHVTSGS 300

Query: 301 GTPLMPNRTFETYIFALFNEDLKQGPTCERNFGLFHPNMTPVYDVGILRST--------- 351
           GTPLMPNRTFETYIFALFNE+LK GPTCERNFGLF P+MTPVYD+GILR T         
Sbjct: 301 GTPLMPNRTFETYIFALFNENLKPGPTCERNFGLFQPDMTPVYDIGILRPTVAAAANNQH 360

Query: 352 ARSSIPTS-NPTPKVETPQRA-PEGKRWCVPKTGADIEALQRNIDYVCGMGFN-CEAIQE 408
           A SSIP +  P P V  P  + PEGKRWC+PKTGAD EALQRNIDYVCG+G   CE IQ+
Sbjct: 361 ASSSIPKNPTPVPMVAPPASSDPEGKRWCLPKTGADTEALQRNIDYVCGLGAEYCEPIQD 420

Query: 409 GGSCFLPNTVRAHAAYAMNVYYQAMGRHDYACDFIQTGAVTDLDPS 454
            G CFLPNTVRAHAA+AMN YYQA GR+ Y CDF QTGA++ +DPS
Sbjct: 421 NGKCFLPNTVRAHAAFAMNAYYQANGRNAYDCDFEQTGAISSVDPS 466

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|302143931|emb|CBI23036.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224120870|ref|XP_002318439.1| predicted protein [Populus trichocarpa] gi|222859112|gb|EEE96659.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359490812|ref|XP_002271991.2| PREDICTED: glucan endo-1,3-beta-glucosidase 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224132710|ref|XP_002321390.1| predicted protein [Populus trichocarpa] gi|222868386|gb|EEF05517.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449456419|ref|XP_004145947.1| PREDICTED: glucan endo-1,3-beta-glucosidase-like [Cucumis sativus] gi|449497400|ref|XP_004160391.1| PREDICTED: glucan endo-1,3-beta-glucosidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|79328626|ref|NP_001031936.1| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] gi|332005907|gb|AED93290.1| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297812609|ref|XP_002874188.1| hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis lyrata subsp. lyrata] gi|297320025|gb|EFH50447.1| hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|186525331|ref|NP_001119271.1| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] gi|332005908|gb|AED93291.1| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|116787932|gb|ABK24695.1| unknown [Picea sitchensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query460
TAIR|locus:1009023441458 AT5G24318 [Arabidopsis thalian 0.936 0.941 0.652 2.8e-160
TAIR|locus:2100011449 AT3G55430 [Arabidopsis thalian 0.910 0.933 0.470 6.9e-102
TAIR|locus:2139519504 AT4G34480 [Arabidopsis thalian 0.915 0.835 0.478 3.8e-101
TAIR|locus:2042604503 AT2G16230 [Arabidopsis thalian 0.919 0.840 0.456 3.9e-99
TAIR|locus:2075205356 AT3G46570 [Arabidopsis thalian 0.691 0.893 0.541 4.1e-88
TAIR|locus:2116327455 AT4G26830 [Arabidopsis thalian 0.919 0.929 0.401 1.4e-85
TAIR|locus:2039742 549 AT2G39640 [Arabidopsis thalian 0.895 0.750 0.414 1.8e-85
TAIR|locus:2161710465 AT5G55180 [Arabidopsis thalian 0.921 0.911 0.399 8e-85
TAIR|locus:2056519472 AT2G05790 [Arabidopsis thalian 0.934 0.911 0.401 1e-84
TAIR|locus:2065403501 AT2G01630 [Arabidopsis thalian 0.893 0.820 0.419 5.6e-84
TAIR|locus:1009023441 AT5G24318 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1561 (554.6 bits), Expect = 2.8e-160, P = 2.8e-160
 Identities = 284/435 (65%), Positives = 345/435 (79%)

Query:    26 GSEGSIGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTV 85
             GSE SIGVNYGT+ANNLPPP  VA FLL ST+INR+RLFD DP++++AFA+TGIAVTVTV
Sbjct:    25 GSEASIGVNYGTLANNLPPPQQVAEFLLHSTVINRIRLFDTDPQILQAFANTGIAVTVTV 84

Query:    86 PNDQIPYLTKLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLH 145
             PNDQIP+LT L+ A+QW+ ++IQP+ P+TNI+RI VGNE++STA  LLI +L+PAMQ+LH
Sbjct:    85 PNDQIPHLTNLSSAKQWISDHIQPHFPSTNIIRILVGNEVISTADHLLIRTLIPAMQSLH 144

Query:   146 TALVGVSLDRRIQVSTPHXXXXXXXXXXXXXXKFHQGYDIHVLKPLLSFLRATKSPFLIN 205
             TALV  SL RRIQ+STPH              KF +GYD  VLKPLLSFLR+T SPF++N
Sbjct:   145 TALVSASLHRRIQISTPHSLGTLTNSTPPSSAKFRRGYDAQVLKPLLSFLRSTSSPFVVN 204

Query:   206 PYPFFGCSPETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIA 265
             PYPFFG S ETLD+ALFRPN G+FD++TK++YTNMLD QLD+V+SAM  LGF DVEIVI 
Sbjct:   205 PYPFFGYSIETLDFALFRPNPGLFDQHTKLLYTNMLDAQLDSVYSAMDKLGFSDVEIVIG 264

Query:   266 ETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQG 325
             E GWPS+GD  Q+GVD  +AA++N NL+  V SG GTPLMPNRTFETYIFALFNE+LK G
Sbjct:   265 EIGWPSEGDIDQIGVDVDTAAEFNKNLIARVDSGTGTPLMPNRTFETYIFALFNENLKSG 324

Query:   326 PTCERNFGLFHPNMTPVYDVGILRSTARSSIPTSNPTPKVETPQRAPEGKRWCVPKTGAD 385
             PT ERNFG+F  ++TP+YD+GILR T RSS P  NP     +P R    KRWCV K GA+
Sbjct:   325 PTSERNFGIFRSDLTPIYDIGILRPTFRSSDPVYNP----RSPVRGSSSKRWCVTKAGAE 380

Query:   386 IEALQRNIDYVCGMGFNCEAIQEGGSCFLPNTVRAHAAYAMNVYYQAMGRHDYACDFIQT 445
               ALQRNIDYVCG+G +C  I EGG C+LPNTV+AH+ YAMN+YYQ M +H++ CDF  T
Sbjct:   381 TVALQRNIDYVCGLGLDCRPINEGGLCYLPNTVKAHSKYAMNLYYQTMEKHEFDCDFDNT 440

Query:   446 GAVTDLDPSYGKCKY 460
             G +T +DPSYG C+Y
Sbjct:   441 GEITTIDPSYGNCEY 455
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
TAIR|locus:2100011 AT3G55430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139519 AT4G34480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042604 AT2G16230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075205 AT3G46570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116327 AT4G26830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2039742 AT2G39640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161710 AT5G55180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056519 AT2G05790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065403 AT2G01630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P52409E13B_WHEAT3, ., 2, ., 1, ., 3, 90.51830.93040.9284N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.390.914
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query460
pfam00332310 pfam00332, Glyco_hydro_17, Glycosyl hydrolases fam 1e-89
smart0076885 smart00768, X8, Possibly involved in carbohydrate 6e-39
pfam0798377 pfam07983, X8, X8 domain 3e-22
>gnl|CDD|215863 pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 Back     alignment and domain information 
 Score =  275 bits (704), Expect = 1e-89
 Identities = 125/320 (39%), Positives = 180/320 (56%), Gaps = 17/320 (5%)

Query: 31  IGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQI 90
           IGV YG   NNLP P+ V   L +S  I R+R++D D K ++A   +GI V + VPND +
Sbjct: 1   IGVCYGVKGNNLPSPSDVVS-LYKSNNIRRMRIYDPDTKALKALRGSGINVILGVPNDDL 59

Query: 91  PYL-TKLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHTALV 149
             L    + A  W+++N++PY P   I  I VGNE+    ++   + LVPAM+ +  AL 
Sbjct: 60  AELAGSQSNAASWVQDNVRPYAPKVKIRYIAVGNEVSPGTTQ---SFLVPAMRNIRNALT 116

Query: 150 GVSLDRRIQVSTPHSLGILSSSSPPSSGKFHQGYDIHVLKPLLSFLRATKSPFLINPYPF 209
              L  +I+VST     IL +S PPS G F       +  P++ FL  T +P L N YP+
Sbjct: 117 AAGLGNKIKVSTSVRFDILGNSFPPSYGSFRVETRSFMD-PIIVFLAGTNAPLLANVYPY 175

Query: 210 FGCSPET----LDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIA 265
           F  S       L+YALF+P + V D      Y N+ D  +DAV++A++  G   VE+V++
Sbjct: 176 FAYSNNPRDISLNYALFQPGTTVVDGGL--GYQNLFDAMVDAVYAALEKAGGPSVEVVVS 233

Query: 266 ETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQG 325
           E+GWPS G         ++A  YN NL+ HV    GTP  P    ETY+FA+F+E+ K G
Sbjct: 234 ESGWPSDGGF---AATIENARTYNQNLINHV--KKGTPKRPGWAIETYVFAMFDENQKPG 288

Query: 326 PTCERNFGLFHPNMTPVYDV 345
            + E++FGLF+PN  P Y +
Sbjct: 289 ESVEKHFGLFYPNKQPKYPI 308

Length = 310
>gnl|CDD|197867 smart00768, X8, Possibly involved in carbohydrate binding Back     alignment and domain information
>gnl|CDD|219681 pfam07983, X8, X8 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 460
PF00332310 Glyco_hydro_17: Glycosyl hydrolases family 17; Int 100.0
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 100.0
smart0076885 X8 Possibly involved in carbohydrate binding. The 99.95
PF0798378 X8: X8 domain; InterPro: IPR012946 The X8 domain [ 99.86
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 98.87
PF03198314 Glyco_hydro_72: Glucanosyltransferase; InterPro: I 98.58
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 98.24
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 97.76
PRK10150604 beta-D-glucuronidase; Provisional 97.66
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 97.37
PF11790239 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; 96.72
PF02836298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 91.34
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 85.24
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 Back     alignment and domain information 
Probab=100.00  E-value=4.6e-87  Score=672.61  Aligned_cols=305  Identities=50%  Similarity=0.905  Sum_probs=249.9

Q ss_pred             eeEEecCCCCCCCChHHHHHHHHhcCCCCEEEEccCChHHHHHHHhCCCeEEEeeCCCCcccc-cCHHHHHHHHHhcccc
Q 043079           31 IGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYL-TKLNFAEQWLKNNIQP  109 (460)
Q Consensus        31 ~GvnYg~~~~n~ps~~~vv~ll~k~~~~~~VRiY~~d~~vL~A~~~tgi~v~vGv~n~~l~~~-~~~~~a~~wv~~nv~~  109 (460)
                      ||||||+.++|+|+|.+|+++| |+++|++||||++|+++|+|+++|||+|++||+|++++++ +++..|..||++||.+
T Consensus         1 iGvnyG~~~~nlp~p~~vv~l~-ks~~i~~vri~d~~~~iL~a~a~S~i~v~v~vpN~~l~~la~~~~~A~~Wv~~nv~~   79 (310)
T PF00332_consen    1 IGVNYGRVGNNLPSPCKVVSLL-KSNGITKVRIYDADPSILRAFAGSGIEVMVGVPNEDLASLASSQSAAGSWVRTNVLP   79 (310)
T ss_dssp             EEEEE---SSS---HHHHHHHH-HHTT--EEEESS--HHHHHHHTTS--EEEEEE-GGGHHHHHHHHHHHHHHHHHHTCT
T ss_pred             CeEeccCccCCCCCHHHHHHHH-HhcccccEEeecCcHHHHHHHhcCCceeeeccChHHHHHhccCHHHHhhhhhhcccc
Confidence            7999999999999999999999 9999999999999999999999999999999999999999 8889999999999999


Q ss_pred             CCCCccEEEEEeccccccccchhhHHHHHHHHHHHHHHHhhCCCCCceEEeccccccccccCCCCCCccccCCccchhhh
Q 043079          110 YTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHTALVGVSLDRRIQVSTPHSLGILSSSSPPSSGKFHQGYDIHVLK  189 (460)
Q Consensus       110 ~~~~~~I~~I~VGNEvl~~~~~~~~~~Lv~am~~v~~aL~~~gl~~~IkVsT~~~~~vl~~s~pPS~g~f~~~~~~~~~~  189 (460)
                      |+|+++|++|+||||++......   .|||+|+++|++|+++||+++|||+|+++++++.++||||+|.|++++. ++|+
T Consensus        80 ~~~~~~i~~i~VGnEv~~~~~~~---~lvpAm~ni~~aL~~~~L~~~IkVst~~~~~vl~~s~PPS~g~F~~~~~-~~~~  155 (310)
T PF00332_consen   80 YLPAVNIRYIAVGNEVLTGTDNA---YLVPAMQNIHNALTAAGLSDQIKVSTPHSMDVLSNSFPPSAGVFRSDIA-SVMD  155 (310)
T ss_dssp             CTTTSEEEEEEEEES-TCCSGGG---GHHHHHHHHHHHHHHTT-TTTSEEEEEEEGGGEEE-SSGGG-EESHHHH-HHHH
T ss_pred             cCcccceeeeecccccccCccce---eeccHHHHHHHHHHhcCcCCcceeccccccccccccCCCccCcccccch-hhhh
Confidence            99999999999999999875322   8999999999999999999999999999999999999999999999987 7899


Q ss_pred             hHHHHHhhcCCCccccCCCCCCC----CCCCcccccccCCCceecCCCCceecchhHHHHHHHHHHHHHhCCCCceEEEe
Q 043079          190 PLLSFLRATKSPFLINPYPFFGC----SPETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIA  265 (460)
Q Consensus       190 ~~ldfL~~~~sp~~vNiyPyf~~----~~~~ldyA~f~~~~~~~d~~~~~~Y~n~fda~~Da~~~a~~k~g~~~~~vvVt  265 (460)
                      ++++||..+++|||+|+||||++    .+++||||+|+++..++|+  +++|+||||+|+|++++||+|+|+++++|+||
T Consensus       156 ~~l~fL~~t~spf~vN~yPyfa~~~~~~~~~l~yAlf~~~~~~~D~--~~~y~nlfDa~~da~~~a~~~~g~~~~~vvv~  233 (310)
T PF00332_consen  156 PLLKFLDGTNSPFMVNVYPYFAYQNNPQNISLDYALFQPNSGVVDG--GLAYTNLFDAMVDAVYAAMEKLGFPNVPVVVG  233 (310)
T ss_dssp             HHHHHHHHHT--EEEE--HHHHHHHSTTTS-HHHHTT-SSS-SEET--TEEESSHHHHHHHHHHHHHHTTT-TT--EEEE
T ss_pred             HHHHHhhccCCCceeccchhhhccCCcccCCccccccccccccccc--chhhhHHHHHHHHHHHHHHHHhCCCCceeEEe
Confidence            99999999999999999999988    6899999999998877755  88999999999999999999999999999999


Q ss_pred             eeccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEcccCCCCCCCCCCcceeccCCCCCeeeee
Q 043079          266 ETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQGPTCERNFGLFHPNMTPVYDV  345 (460)
Q Consensus       266 ETGWPS~G~~~~~~as~~na~~y~~~lv~~~~s~~GtP~rp~~~i~~yiF~lFDE~~K~G~~~E~~wGlf~~d~~~ky~l  345 (460)
                      ||||||+|+   .+|+++||+.|++|+++|+.  .|||+||+..+++||||||||+||+|+.+|||||||++||+|||+|
T Consensus       234 ETGWPs~G~---~~a~~~nA~~~~~nl~~~~~--~gt~~~~~~~~~~y~F~~FdE~~K~~~~~E~~wGlf~~d~~~ky~~  308 (310)
T PF00332_consen  234 ETGWPSAGD---PGATPENAQAYNQNLIKHVL--KGTPLRPGNGIDVYIFEAFDENWKPGPEVERHWGLFYPDGTPKYDL  308 (310)
T ss_dssp             EE---SSSS---TTCSHHHHHHHHHHHHHHCC--GBBSSSBSS---EEES-SB--TTSSSSGGGGG--SB-TTSSBSS--
T ss_pred             ccccccCCC---CCCCcchhHHHHHHHHHHHh--CCCcccCCCCCeEEEEEEecCcCCCCCcccceeeeECCCCCeecCC
Confidence            999999999   35999999999999999997  6999999999999999999999999977999999999999999999


Q ss_pred             ee
Q 043079          346 GI  347 (460)
Q Consensus       346 ~~  347 (460)
                      +|
T Consensus       309 ~f  310 (310)
T PF00332_consen  309 DF  310 (310)
T ss_dssp             --
T ss_pred             CC
Confidence            86

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00768 X8 Possibly involved in carbohydrate binding Back     alignment and domain information
>PF07983 X8: X8 domain; InterPro: IPR012946 The X8 domain [] contains 6 conserved cysteine residues that presumably form three disulphide bridges Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query460
1ghs_A306 The Three-Dimensional Structures Of Two Plant Beta- 1e-47
2cyg_A312 Crystal Structure At 1.45- Resolution Of The Major 3e-47
3ur7_A323 Higher-density Crystal Structure Of Potato Endo-1,3 6e-42
3em5_A316 Crystal Structure Of A Native Endo Beta-1,3-Glucana 3e-41
4gzi_A323 Active-site Mutant Of Potato Endo-1,3-beta-glucanas 4e-41
1aq0_A306 Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space G 7e-41
2jon_A101 Solution Structure Of The C-Terminal Domain Ole E 9 1e-24
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities Length = 306 Back     alignment and structure 
Iteration: 1

 Score =  187 bits (474), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 175/320 (54%), Gaps = 21/320 (6%)
Query: 31  IGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQI 90
           IGV YG + NNLP  + V   L  S  IN +R++ AD + + A  ++GI + + + NDQ+
Sbjct: 1   IGVCYGVIGNNLPSRSDVVQ-LYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQL 59
Query: 91  PYLT-KLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHTALV 149
             +    + A  W++NN++PY PA NI  I  GNE+   A++    S++PAM+ L+ AL 
Sbjct: 60  ANIAASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQGGATQ----SILPAMRNLNAALS 115
Query: 150 GVSLDRRIQVSTPHXXXXXXXXXXXXXXKFHQGYDIHVLKPLLSFLRATKSPFLINPYPF 209
             +    I+VST                 F   Y   V +     L +T +P L N YP+
Sbjct: 116 -AAGLGAIKVSTSIRFDEVANSFPPSAGVFKNAYMTDVAR----LLASTGAPLLANVYPY 170
Query: 210 FGCSPE----TLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIA 265
           F         +L+YA F+P + V D+N  + YT++ D  +DAV++A++  G   V++V++
Sbjct: 171 FAYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVS 230
Query: 266 ETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQG 325
           E+GWPS G        + +A  YN  L+ HV  G GTP       ETYIFA+FNE+ K G
Sbjct: 231 ESGWPSAGG---FAASAGNARTYNQGLINHV--GGGTP-KKREALETYIFAMFNENQKTG 284
Query: 326 PTCERNFGLFHPNMTPVYDV 345
              ER+FGLF+P+ +P Y++
Sbjct: 285 DATERSFGLFNPDKSPAYNI 304
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome Length = 312 Back     alignment and structure
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase Length = 323 Back     alignment and structure
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis Length = 316 Back     alignment and structure
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose Length = 323 Back     alignment and structure
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group Length = 306 Back     alignment and structure
>pdb|2JON|A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 Length = 101 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query460
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 1e-102
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 1e-102
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 1e-101
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 2e-96
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 7e-96
2jon_A101 Beta-1,3-glucanase; olive pollen, allergen; NMR {O 7e-40
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 5e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Length = 323 Back     alignment and structure
 Score =  308 bits (789), Expect = e-102
 Identities = 107/331 (32%), Positives = 168/331 (50%), Gaps = 15/331 (4%)

Query: 30  SIGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQ 89
            IGV YG +ANNLP    V   L  +  I ++R++     +  A   + I + + VPN  
Sbjct: 2   PIGVCYGKIANNLPSDQDVIK-LYNANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQD 60

Query: 90  IPYLTKLNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIAS-LVPAMQTLHTAL 148
           +  L   + A  W+++NI+ + P      I VGNE+         A  + PAM+ ++ AL
Sbjct: 61  LEALANPSNANGWVQDNIRNHFPDVKFKYIAVGNEVDPGRESGKYARFVGPAMENIYNAL 120

Query: 149 VGVSLDRRIQVSTPHSLGILSSSSPPSSGKFHQGYDIHVLKPLLSFLRATKSPFLINPYP 208
               L  +I+VST    G+L+++ PP    F + Y    + P++ FL     P L N YP
Sbjct: 121 SSAGLQNQIKVSTSTYSGLLTNTYPPRDSIFREEYK-SFINPIIGFLARHNLPLLANIYP 179

Query: 209 FFGCSPET----LDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVI 264
           +FG    T    L YALF              Y N+ D  +D+++ A + LG  ++EI++
Sbjct: 180 YFGHIDNTNAVPLSYALFNQQR-----RNDTGYQNLFDALVDSMYFATEKLGGQNIEIIV 234

Query: 265 AETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQ 324
           +E+GWPS+G         ++A  Y  NL+ HV  G GTP  P +T ETY+FA+F+E+ K+
Sbjct: 235 SESGWPSEGHP---AATLKNARTYYTNLINHVKRGAGTPKKPGKTIETYLFAMFDENEKK 291

Query: 325 GPTCERNFGLFHPNMTPVYDVGILRSTARSS 355
           G   E++FGLF+P+  P Y +    +     
Sbjct: 292 GEASEKHFGLFNPDQRPKYQLNFNLNHHHHH 322
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Length = 306 Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Length = 312 Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A* Length = 316 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Length = 306 Back     alignment and structure
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} Length = 101 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Length = 555 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query460
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 100.0
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 100.0
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 100.0
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 100.0
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 100.0
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 100.0
2jon_A101 Beta-1,3-glucanase; olive pollen, allergen; NMR {O 99.97
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 99.54
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 99.51
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 99.3
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 98.96
4ekj_A500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 98.42
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 98.36
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 98.29
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 98.23
3cmg_A667 Putative beta-galactosidase; structural genomics, 98.2
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 98.11
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 98.09
1w91_A503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 98.02
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 97.99
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 97.97
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 97.94
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 97.91
1uhv_A500 Beta-xylosidase; family 39 glycoside hydrolase, xy 97.9
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 97.89
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 97.88
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 97.87
3fn9_A692 Putative beta-galactosidase; structural genomics, 97.87
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 97.84
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 97.8
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 97.77
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 97.77
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 97.75
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 97.73
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 97.72
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 97.65
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 97.64
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 97.59
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 97.52
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 97.48
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 97.47
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 97.38
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 97.38
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 97.3
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 97.19
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 97.18
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 97.17
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 97.16
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 97.06
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 97.06
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 96.98
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 96.96
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 96.9
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 96.65
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 96.26
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 96.19
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 96.18
1ug6_A431 Beta-glycosidase; glucosidase, atomic resolution, 95.62
1vff_A423 Beta-glucosidase; glycosyl hydrolase, membrane-bou 95.56
3fj0_A465 Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase 95.5
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 95.45
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 95.39
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 95.25
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 95.19
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 95.19
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 95.15
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 95.05
1qw9_A502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 94.94
2c7f_A513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 94.6
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 94.54
3d3a_A 612 Beta-galactosidase; protein structure initiative I 94.5
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 94.18
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 93.78
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 93.72
2y2w_A574 Arabinofuranosidase; hydrolase, arabinoxylan, glyc 93.57
2vrq_A496 Alpha-L-arabinofuranosidase; hydrolase, glycosidas 92.96
3vny_A488 Beta-glucuronidase; TIM barrel, greek-KEY, glycosi 92.45
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 90.59
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 89.92
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 89.19
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 88.07
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 86.46
3thd_A 654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 85.59
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 84.32
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 83.36
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
Probab=100.00  E-value=2.4e-97  Score=744.71  Aligned_cols=309  Identities=35%  Similarity=0.628  Sum_probs=294.8

Q ss_pred             ceeEEecCCCCCCCChHHHHHHHHhcCCCCEEEEccCChHHHHHHHhCCCeEEEeeCCCCcccccCHHHHHHHHHhcccc
Q 043079           30 SIGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYLTKLNFAEQWLKNNIQP  109 (460)
Q Consensus        30 ~~GvnYg~~~~n~ps~~~vv~ll~k~~~~~~VRiY~~d~~vL~A~~~tgi~v~vGv~n~~l~~~~~~~~a~~wv~~nv~~  109 (460)
                      .||||||+.++|||+|++|+++| |+++|++||||++|+++|+|++++||+|+|||||+++++++++.+|.+||++||.+
T Consensus         1 ~iGvnyG~~~~nlp~p~~vv~ll-ks~gi~~VRlYdaD~~vL~Al~~sgi~v~vGV~n~~l~~la~~~~A~~WV~~nV~~   79 (316)
T 3em5_A            1 EVGVCYGMQGNNLPPVSEVIALY-KKSNITRMRIYDPNQAVLEALRGSNIELILGVPNSDLQSLTNPSNAKSWVQKNVRG   79 (316)
T ss_dssp             CCEEECCCCCTTCCCHHHHHHHH-HHTTCCEEECSSCCHHHHHHHTTCCCEEEEEECGGGHHHHTSHHHHHHHHHHHTGG
T ss_pred             CeeEEcCcCCCCCCCHHHHHHHH-HHcCCCEEEEecCCHHHHHHhhcCCceEEEecccchhhhccCHHHHHHHHHHhhhh
Confidence            38999999999999999999999 99999999999999999999999999999999999998887788999999999999


Q ss_pred             CCCCccEEEEEeccccccccchhh---HHHHHHHHHHHHHHHhhCCCCCceEEeccccccccccCCCCCCccccCCccch
Q 043079          110 YTPATNIVRIFVGNEILSTASKLL---IASLVPAMQTLHTALVGVSLDRRIQVSTPHSLGILSSSSPPSSGKFHQGYDIH  186 (460)
Q Consensus       110 ~~~~~~I~~I~VGNEvl~~~~~~~---~~~Lv~am~~v~~aL~~~gl~~~IkVsT~~~~~vl~~s~pPS~g~f~~~~~~~  186 (460)
                      |+|.++|++|+||||++.+++ .+   ++.|+|+|++||++|+++||+++|||||++++++|.+|||||+|.||+++. +
T Consensus        80 y~p~~~I~~IaVGNEvl~~~~-~t~~~~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s~~vl~~s~pPS~g~F~~~~~-~  157 (316)
T 3em5_A           80 FWSSVRFRYIAVGNEISPVNR-GTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVR-S  157 (316)
T ss_dssp             GTTTSCEEEEEEEESCCTTCT-TTGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEECTTSEEECSSGGGCEECGGGH-H
T ss_pred             cCCCceEEEEEEecccccCCC-ccccCHHHHHHHHHHHHHHHHHCCCCCceEEEecccccccccCCCCCCceechhHH-H
Confidence            999999999999999999863 22   889999999999999999999999999999999999999999999999998 7


Q ss_pred             hhhhHHHHHhhcCCCccccCCCCCCC----CCCCcccccccCCCceecCCCCceecchhHHHHHHHHHHHHHhCCCCceE
Q 043079          187 VLKPLLSFLRATKSPFLINPYPFFGC----SPETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEI  262 (460)
Q Consensus       187 ~~~~~ldfL~~~~sp~~vNiyPyf~~----~~~~ldyA~f~~~~~~~d~~~~~~Y~n~fda~~Da~~~a~~k~g~~~~~v  262 (460)
                      +|+++++||++++||||||+||||+|    .+|++|||||++ .+++|++++++|+||||||+||+++||+|+|+++++|
T Consensus       158 ~~~pil~fL~~~~sp~~vN~YPyf~~~~~~~~i~l~yAlf~~-~~~~~~~~~~~Y~nlfDa~~Da~~~Al~~~g~~~~~v  236 (316)
T 3em5_A          158 YLNPIIRFLSSIRSPLLANIYPYFTYAGNPRDISLPYALFTS-PSVVVWDGQRGYKNLFDATLDALYSALERASGGSLEV  236 (316)
T ss_dssp             HHHHHHHHHHHTTCCEEEECCHHHHHHHCTTTSCHHHHTTCC-SSCSEEETTEEECSHHHHHHHHHHHHHHHTTCTTCCE
T ss_pred             HHHHHHHHHHhcCCeeEeecchhhhccCCCCCcCchhhcccC-CCcccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCce
Confidence            99999999999999999999999999    689999999998 6778889999999999999999999999999999999


Q ss_pred             EEeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEcccCCCCCCCCCCcceeccCCCCCee
Q 043079          263 VIAETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQGPTCERNFGLFHPNMTPV  342 (460)
Q Consensus       263 vVtETGWPS~G~~~~~~as~~na~~y~~~lv~~~~s~~GtP~rp~~~i~~yiF~lFDE~~K~G~~~E~~wGlf~~d~~~k  342 (460)
                      +|+||||||+|+.   +||++||++|++++++|+  +.|||+|||..+++|||+||||+||+| +.|||||||++|++||
T Consensus       237 ~V~EtGWPs~G~~---~as~~na~~y~~~li~~~--~~GTP~rp~~~~~~y~F~lfDe~~K~~-~~E~~~Glf~~d~~~k  310 (316)
T 3em5_A          237 VVSESGWPSAGAF---AATFDNGRTYLSNLIQHV--KRGTPKRPKRAIETYLFAMFDENKKQP-EVEKHFGLFFPNKWQK  310 (316)
T ss_dssp             EEEEECCCSSSST---TCCHHHHHHHHHHHHHHT--TSCCSSSCSSCCCEEESCSBCCTTCSS-GGGGCCCSBCTTSCBS
T ss_pred             EeccccCCCCCCC---CCCHHHHHHHHHHHHHhc--cCCCCCCCCCCceEEEEEeecCCCCCC-CCCceeeEECCCCCEe
Confidence            9999999999974   699999999999999998  479999999899999999999999995 8999999999999999


Q ss_pred             eeeeec
Q 043079          343 YDVGIL  348 (460)
Q Consensus       343 y~l~~~  348 (460)
                      |+|+|+
T Consensus       311 y~l~~~  316 (316)
T 3em5_A          311 YNLNFS  316 (316)
T ss_dssp             SCCCCC
T ss_pred             ecCCCC
Confidence            999873
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A Back     alignment and structure
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Back     alignment and structure
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Back     alignment and structure
>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 460
d2cyga1312 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana ( 1e-108
d1ghsa_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 1e-103
d1aq0a_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 1e-98
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Length = 312 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

 Score =  321 bits (824), Expect = e-108
 Identities = 121/321 (37%), Positives = 185/321 (57%), Gaps = 15/321 (4%)

Query: 31  IGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQI 90
           IGV YG + NNLPPP+ V   L +S  I R+RL+D +   ++A  ++ I V + VP   +
Sbjct: 1   IGVCYGMLGNNLPPPSEVVS-LYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDV 59

Query: 91  PYLTK-LNFAEQWLKNNIQPYTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHTALV 149
             L    + A  W++ N+  Y P+ +   I VGNE++  +   L   ++PAM+ ++ AL 
Sbjct: 60  QSLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSD--LAQYILPAMRNIYNALS 117

Query: 150 GVSLDRRIQVSTPHSLGILSSSSPPSSGKFHQGYDIHVLKPLLSFLRATKSPFLINPYPF 209
              L  +I+VST    G+L +S PPS+G F        L P++ FL +  +P L+N YP+
Sbjct: 118 SAGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQ-AYLSPIVQFLASNGAPLLVNVYPY 176

Query: 210 FGCSP----ETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIA 265
           F  +      +L YALF  + GV  ++ +  Y N+ D  +DAVF+A++ +G  +V +V++
Sbjct: 177 FSYTGNPGQISLPYALFTAS-GVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVS 235

Query: 266 ETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQG 325
           E+GWPS G  ++      +A  YN NL+RHV  G GTP  P +  E YIF +FNE+ K G
Sbjct: 236 ESGWPSAGGGAEASTS--NAQTYNQNLIRHV--GGGTPRRPGKEIEAYIFEMFNENQKAG 291

Query: 326 PTCERNFGLFHPNMTPVYDVG 346
              E+NFGLF+PN  PVY + 
Sbjct: 292 GI-EQNFGLFYPNKQPVYQIS 311
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query460
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 100.0
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 99.03
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 98.99
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 98.87
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 98.64
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 98.45
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 98.44
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 98.44
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 98.31
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 98.16
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 97.91
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 97.88
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 97.87
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 97.82
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 97.78
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 97.75
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 97.71
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 97.67
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 97.64
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 97.62
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 97.44
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 97.39
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 96.93
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 96.47
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 96.2
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 96.19
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 95.19
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 94.91
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 94.84
d2je8a5348 Five-domain beta-mannosidase, domain 3 {Bacteroide 94.7
d1jz8a5292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 94.12
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 93.89
d1qoxa_449 Beta-glucosidase A {Bacillus circulans, subsp. alk 93.82
d1yq2a5297 beta-Galactosidase, domain 3 {Arthrobacter sp. c2- 93.23
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 92.68
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 90.98
d1v02a_484 Plant beta-glucosidase (myrosinase) {Sorghum bicol 90.77
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 86.26
d2f6ka1306 Putative amidohydrolase LP2961 {Lactobacillus plan 80.48
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

Probab=100.00  E-value=2.4e-85  Score=658.44  Aligned_cols=307  Identities=39%  Similarity=0.747  Sum_probs=291.3

Q ss_pred             eeEEecCCCCCCCChHHHHHHHHhcCCCCEEEEccCChHHHHHHHhCCCeEEEeeCCCCcccc-cCHHHHHHHHHhcccc
Q 043079           31 IGVNYGTVANNLPPPTHVAHFLLESTIINRVRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYL-TKLNFAEQWLKNNIQP  109 (460)
Q Consensus        31 ~GvnYg~~~~n~ps~~~vv~ll~k~~~~~~VRiY~~d~~vL~A~~~tgi~v~vGv~n~~l~~~-~~~~~a~~wv~~nv~~  109 (460)
                      +|||||++++|||||++|+++| |+++|++||||++||+||+|++++||+|||||||+++.++ +++..|++|++++|.+
T Consensus         1 ~gi~yg~~~~nlps~~~vv~lL-k~~~i~~IRlY~~d~~vL~A~~~tgi~v~lGv~n~~l~~~~~~~~~a~~wv~~~v~~   79 (312)
T d2cyga1           1 IGVCYGMLGNNLPPPSEVVSLY-KSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNPSAAGDWIRRNVVA   79 (312)
T ss_dssp             CEEECCCCCSSCCCHHHHHHHH-HHTTCCEEEESSCCHHHHHHHTTSCCEEEEEECHHHHHHHHHCTTHHHHHHHHHTGG
T ss_pred             CeeeCCCccCCCCCHHHHHHHH-HhCCCCEEEEeCCCHHHHHHHHhcCCEEEEeeccchhhhccCCHHHHHHHHHHHHhc
Confidence            6999999999999999999999 9999999999999999999999999999999999999999 8999999999999999


Q ss_pred             CCCCccEEEEEeccccccccchhhHHHHHHHHHHHHHHHhhCCCCCceEEeccccccccccCCCCCCccccCCccchhhh
Q 043079          110 YTPATNIVRIFVGNEILSTASKLLIASLVPAMQTLHTALVGVSLDRRIQVSTPHSLGILSSSSPPSSGKFHQGYDIHVLK  189 (460)
Q Consensus       110 ~~~~~~I~~I~VGNEvl~~~~~~~~~~Lv~am~~v~~aL~~~gl~~~IkVsT~~~~~vl~~s~pPS~g~f~~~~~~~~~~  189 (460)
                      |++.++|++|+||||+|.+++  ....++|+|+++|++|+.+|+.+.||+++++++++|..|+|||++.|++++. +.|+
T Consensus        80 ~~~~~~I~~IaVGNE~l~~~~--~~~~~lpa~~~~~~aL~~~g~~~~i~~t~~~~~~~~~~s~p~sa~~~~~~~~-~~l~  156 (312)
T d2cyga1          80 YWPSVSFRYIAVGNELIPGSD--LAQYILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQ-AYLS  156 (312)
T ss_dssp             GTTTSEEEEEEEEESCTTTST--TGGGHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGBSCCSSGGGCCBCHHHH-HHHH
T ss_pred             cCCCceEEEEEecCEEeeCCc--CchhhcccHHHHHHHHHHCCCCCCceeeeeeeeeccccCCCCccccccchhH-HHHH
Confidence            999999999999999999864  4577899999999999999999999999999999999999999999999987 7999


Q ss_pred             hHHHHHhhcCCCccccCCCCCCC----CCCCcccccccCCCceecCCCCceecchhHHHHHHHHHHHHHhCCCCceEEEe
Q 043079          190 PLLSFLRATKSPFLINPYPFFGC----SPETLDYALFRPNSGVFDENTKIVYTNMLDGQLDAVFSAMKLLGFDDVEIVIA  265 (460)
Q Consensus       190 ~~ldfL~~~~sp~~vNiyPyf~~----~~~~ldyA~f~~~~~~~d~~~~~~Y~n~fda~~Da~~~a~~k~g~~~~~vvVt  265 (460)
                      +++|||..+++|||+|+||||++    .+++++||+|+++ +..+.+++..|+|+||+|+|++++||+|+|+++++|+|+
T Consensus       157 ~~~~fl~~~~~~~~~n~ypy~~~~~~~~~~~l~~a~f~~~-~~~~~~~~~~y~n~~d~~~d~~~~a~~~~g~~~~~ivI~  235 (312)
T d2cyga1         157 PIVQFLASNGAPLLVNVYPYFSYTGNPGQISLPYALFTAS-GVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVS  235 (312)
T ss_dssp             HHHHHHHHHTCCEEEECCHHHHHHHSTTTSCHHHHHTCCC-SCSEEETTEEECSHHHHHHHHHHHHHHTTTCTTCCEEEE
T ss_pred             HHHHHHHhcCCeeeEeccchhhhccCcccccchhhhccCC-CccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEe
Confidence            99999999999999999999987    6799999999987 345566889999999999999999999999999999999


Q ss_pred             eeccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEcccCCCCCCCCCCcceeccCCCCCeeeee
Q 043079          266 ETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGNGTPLMPNRTFETYIFALFNEDLKQGPTCERNFGLFHPNMTPVYDV  345 (460)
Q Consensus       266 ETGWPS~G~~~~~~as~~na~~y~~~lv~~~~s~~GtP~rp~~~i~~yiF~lFDE~~K~G~~~E~~wGlf~~d~~~ky~l  345 (460)
                      ||||||+|+.  ..|+++||++|+++|++|+.  .|||+||+.++++||||||||+|||| ++|||||||++||+|||+|
T Consensus       236 EtGWPs~G~~--~~as~~na~~y~~~l~~~~~--~gtp~~~~~~i~~f~FeaFDE~wK~G-~~E~~wGlf~~d~~~ky~l  310 (312)
T d2cyga1         236 ESGWPSAGGG--AEASTSNAQTYNQNLIRHVG--GGTPRRPGKEIEAYIFEMFNENQKAG-GIEQNFGLFYPNKQPVYQI  310 (312)
T ss_dssp             EECCCSSSSS--TTSSHHHHHHHHHHHHHHGG--GCCSSSCSSCCCEEESCSBCCTTSCS-SGGGCCCSBCTTSCBSSCC
T ss_pred             cCCcccCCCC--CCCCHHHHHHHHHHHHHHHh--cCCCCCCCCCccEEEEeEeCCCCCCC-CccCccccCCCCCCEecCC
Confidence            9999999975  36999999999999999984  59999999999999999999999999 7999999999999999999


Q ss_pred             ee
Q 043079          346 GI  347 (460)
Q Consensus       346 ~~  347 (460)
                      +|
T Consensus       311 ~f  312 (312)
T d2cyga1         311 SF  312 (312)
T ss_dssp             CC
T ss_pred             CC
Confidence            86
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure