Citrus Sinensis ID: 043087

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750----
MHITQELCSSIHPFNPLVSTFVQISLMLVIAHIFNLIFKPLGQPGPISQMLAGLVLSPSFLSQINKIRSFFIQDLSAFYYRVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVSFVFGIILTYISRFVLDIKDNTPAFSITITILLANSASPVVMRLIDELKFNTSELGRLASTTSLINEVGCIIYYSSFVTVLSSKNFANAIYSIILTALLIIINMYLAKWFARWNKDSKYVSNAQVLFLLVLVVSLAFSIEVLGYNSTITGFLLGVFFPRDGKTTRTLFKKLAYSIHNFVLPIYFGYMGFQFDIRDLLKHYQNILLVLLLLFSCIASRMIGTLFVCHRLKIPRIKAVLLAFVLNLKGNFELILIDVEAGRSATWWSPMIHRMLLIVVVLNTLITGPIIASILRRNENYFAHRNTSVESLDPESEFRILSCAYEPRHASGQLVLSASFGSSISPYLMHLVELPKRRRKAKLLYNQLEDGGQYSDEEDYGGNDVLEINEAVDSFTAQTRIRISQVKIVNTFANMYEDVCNAAEDFRVTIIFLPFHKHQRIDQRLENSKEGYRTTNQKILRHAPCSVGVLVHKNQTGFQLPVAAMLFFGGADDREALALSKRIGKNSNINLTVIRFLYAAKKEEESSPSSQSSSASSPMVGEPSRKVRVLRSLSRNHEIEIAKDNVFFEEFRLRYVTSGEVGLIERYVNNGIETLQVLREIMDSIEFSLFIVGKGSYGGSVMTTGLSDWEECPELGP
ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccHHHHHccccHHccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEcccccHHHHHHHcccccccccccEEEcccccccccHHHHHHHccccccccccccccccccHHHHHHHHHHHHccccEEEEEEEEEcccccHHHHHHHHHHHccccEEEEccccccccccccccccccHHHHHHHHHccccccEEEEEccccccccccEEEEEccccccHHHHHHHHHHHHHcccEEEEEEEEEEcccccccccccccccccccccccccccccHHHHcccccHHHHHHccHHHHHHHHHHHcccccEEEEEEEEcccHHHHHHHHHHHccccccEEEEccccccccccccccccccccccccc
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcHHHHcccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHEEHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHEHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcHHccccccccccccccEEEEEEEccccccccHHHcccccccccEEEEEEEEEcccccccEEEHcccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEEEEEccHHHHHHHHHHHHHHccEEEEEEEccccccccccEccccHHHHHHHHHHHHccccEEEEEEEcccccccEEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEcccccccccccccHHHHcccccccccccccccEEEEccccHHHHHHcHHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHHHccccccEEEEEccccccccHHcccccHHHcccccc
mhitqelcssihpfnplvSTFVQISLMLVIAHIFNLifkplgqpgpisqmlaglvlspsflSQINKIRSFFIQDLSAFYYRVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVSFVFGIILTYISRFvldikdntpaFSITITILLANSASPVVMRLIDELKFNtselgrlasttSLINEVGCIIYYSSFVTVLSSKNFANAIYSIILTALLIIINMYLAKWFARWNKDSKYVSNAQVLFLLVLVVSLAFSIEVLGYNSTITGFLLgvffprdgkttRTLFKKLAYSIHNFVLpiyfgymgfqFDIRDLLKHYQNILLVLLLLFSCIASRMIGTLFVCHRLKIPRIKAVLLAFVLNLKGNFELILIDVEagrsatwwspMIHRMLLIVVVLNTLITGPIIASILRRNenyfahrntsvesldpesefrilscayeprhasgqlvlsasfgssispYLMHLVELPKRRRKAKLLYNQledggqysdeedyggndvleINEAVDSFTAQTRIRISQVKIVNTFANMYEDVCNAAEDFRVTIIflpfhkhqrIDQRLEnskegyrtTNQKilrhapcsvgvlvhknqtgfqlPVAAMLFFGGADDREALALSKRIGKNSNINLTVIRFLYAAkkeeesspssqsssasspmvgepsrkVRVLRSLSRNheieiakdnvfFEEFRLRYVTSGEVGLIERYVNNGIETLQVLREIMDSIEFSLFIVgkgsyggsvmttglsdweecpelgp
MHITQELCSSIHPFNPLVSTFVQISLMLVIAHIFNLIFKPLGQPGPISQMLAGLVLSPSFLSQINKIRSFFIQDLSAFYYRVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVSFVFGIILTYISRFVLDIKDNTPAFSITITILLANSASPVVMRLIDELKFNTSELGRLASTTSLINEVGCIIYYSSFVTVLSSKNFANAIYSIILTALLIIINMYLAKWFARWNKDSKYVSNAQVLFLLVLVVSLAFSIEVLGYNSTITGFLLGVFFPRDGKTTRTLFKKLAYSIHNFVLPIYFGYMGFQFDIRDLLKHYQNILLVLLLLFSCIASRMIGTLFVCHRLKIPRIKAVLLAFVLNLKGNFELILIDVEAGRSATWWSPMIHRMLLIVVVLNTLITGPIIASILRRNENYFAHRntsvesldpeSEFRILSCAYEPRHASGQLVLSASFGSSISPYLMHLVELPKRRRKAKLLYnqledggqysdEEDYGGNDVLEINEAVDsftaqtrirISQVKIVNTFANMYEDVCNAAEDFRVTIIFLPFHKHQRIDQRLENSKEGYRTTNQKILRHAPCSVGVLVHKNQTGFQLPVAAMLFFGGADDREALALSkrigknsninlTVIRFLYAAKKEeesspssqsssasspmvgepsrKVRVLRslsrnheieiakdnvffeeFRLRYVTSgevglieryvNNGIETLQVLREIMDSIEFSLFIVGKGSYGGSVMTtglsdweecpelgp
MHITQELCSSIHPFNPLVSTFVQISLMLVIAHIFNLIFKPLGQPGPISQMLAGLVLSPSFLSQINKIRSFFIQDLSAFYYRVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVSFVFGIILTYISRFVLDIKDNTPAFSITITILLANSASPVVMRLIDELKFNTSELGRLASTTSLINEVGCIIYYSSFVTVLSSKNFANAIYSIILTALLIIINMYLAKWFARWNKDSKYVSNAQvlfllvlvvslAFSIEVLGYNSTITGFLLGVFFPRDGKTTRTLFKKLAYSIHNFVLPIYFGYMGFQFDIRDLLKHYQNIllvllllFSCIASRMIGTLFVCHRLKIPRIKAVLLAFVLNLKGNFELILIDVEAGRSATWWSPMIHRMllivvvlntlitGPIIASILRRNENYFAHRNTSVESLDPESEFRILSCAYEPRHASGQLVLSASFGSSISPYLMHLVELPKRRRKAKLLYNQLEDGGQYSDEEDYGGNDVLEINEAVDSFTAQTRIRISQVKIVNTFANMYEDVCNAAEDFRVTIIFLPFHKHQRIDQRLENSKEGYRTTNQKILRHAPCSVGVLVHKNQTGFQLPVAAMLFFGGADDREALALSKRIGKNSNINLTVIRFLYaakkeeesspssqsssasspMVGEPsrkvrvlrslsrNHEIEIAKDNVFFEEFRLRYVTSGEVGLIERYVNNGIETLQVLREIMDSIEFSLFIVGKGSYGGSVMTTGLSDWEECPELGP
******LCSSIHPFNPLVSTFVQISLMLVIAHIFNLIFKPLGQPGPISQMLAGLVLSPSFLSQINKIRSFFIQDLSAFYYRVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVSFVFGIILTYISRFVLDIKDNTPAFSITITILLANSASPVVMRLIDELKFNTSELGRLASTTSLINEVGCIIYYSSFVTVLSSKNFANAIYSIILTALLIIINMYLAKWFARWNKDSKYVSNAQVLFLLVLVVSLAFSIEVLGYNSTITGFLLGVFFPRDGKTTRTLFKKLAYSIHNFVLPIYFGYMGFQFDIRDLLKHYQNILLVLLLLFSCIASRMIGTLFVCHRLKIPRIKAVLLAFVLNLKGNFELILIDVEAGRSATWWSPMIHRMLLIVVVLNTLITGPIIASILRRNENYFAHRNTSVE*****SEFRILSCAYEPRHASGQLVLSASFGSSISPYLMHLVELPKRRRKAKLLYNQLEDG*******DYGGNDVLEINEAVDSFTAQTRIRISQVKIVNTFANMYEDVCNAAEDFRVTIIFLPFHKHQRIDQRL*****GYRTTNQKILRHAPCSVGVLVHKNQTGFQLPVAAMLFFGGADDREALALSKRIGKNSNINLTVIRFLYAA***********************************NHEIEIAKDNVFFEEFRLRYVTSGEVGLIERYVNNGIETLQVLREIMDSIEFSLFIVGKGSYGGSVMTTGLSDW********
**ITQELCSSIHPFNPLVSTFVQISLMLVIAHIFNLIFKPLGQPGPISQMLAGLVLSPSFLSQINKIRSFFIQDLSAFYYRVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVSFVFGIILTYISRFVLDIKDNTPAFSITITILLANSASPVVMRLIDELKFNTSELGRLASTTSLINEVGCIIYYSSFVTVLSSKNFANAIYSIILTALLIIINMYLAKWFARWNKDSKYVSNAQVLFLLVLVVSLAFSIEVLGYNSTITGFLLGVFFPRDGKTTRTLFKKLAYSIHNFVLPIYFGYMGFQFDIRDLLKHYQNILLVLLLLFSCIASRMIGTLFVCHRLKIPRIKAVLLAFVLNLKGNFELILIDVEAGRSATWWSPMIHRMLLIVVVLNTLITGPIIASILRR**********************ILSCAYEPRHASGQLVLSASFGSS**PY*****************************************NEAVDSFTAQTRIRISQVKIVNTFANMYEDVCNAAEDFRVTIIFLPFH***************YRTTNQKILRHAPCSVGVLVHKNQTGFQLPVAAMLFFGGADDREALALSKRIGKNSNINLTVIRFLYAA*****************************L***S******IAKDNVFFEEFRLRYVTSGEVGLIERYVNNGIETLQVLREIMDSIEFSLFIVGKGSYGG*VMTTGLSDWEECPELGP
MHITQELCSSIHPFNPLVSTFVQISLMLVIAHIFNLIFKPLGQPGPISQMLAGLVLSPSFLSQINKIRSFFIQDLSAFYYRVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVSFVFGIILTYISRFVLDIKDNTPAFSITITILLANSASPVVMRLIDELKFNTSELGRLASTTSLINEVGCIIYYSSFVTVLSSKNFANAIYSIILTALLIIINMYLAKWFARWNKDSKYVSNAQVLFLLVLVVSLAFSIEVLGYNSTITGFLLGVFFPRDGKTTRTLFKKLAYSIHNFVLPIYFGYMGFQFDIRDLLKHYQNILLVLLLLFSCIASRMIGTLFVCHRLKIPRIKAVLLAFVLNLKGNFELILIDVEAGRSATWWSPMIHRMLLIVVVLNTLITGPIIASILRRNENYFAHRNTSVESLDPESEFRILSCAYEPRHASGQLVLSASFGSSISPYLMHLVELPKRRRKAKLLYNQLEDGGQYSDEEDYGGNDVLEINEAVDSFTAQTRIRISQVKIVNTFANMYEDVCNAAEDFRVTIIFLPFHKHQRIDQRLENSKEGYRTTNQKILRHAPCSVGVLVHKNQTGFQLPVAAMLFFGGADDREALALSKRIGKNSNINLTVIRFLYAAK*************************VRVLRSLSRNHEIEIAKDNVFFEEFRLRYVTSGEVGLIERYVNNGIETLQVLREIMDSIEFSLFIVGKGSYGGSVMTTGLSDW********
***TQELCSSIHPFNPLVSTFVQISLMLVIAHIFNLIFKPLGQPGPISQMLAGLVLSPSFLSQINKIRSFFIQDLSAFYYRVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVSFVFGIILTYISRFVLDIKDNTPAFSITITILLANSASPVVMRLIDELKFNTSELGRLASTTSLINEVGCIIYYSSFVTVLSSKNFANAIYSIILTALLIIINMYLAKWFARWNKDSKYVSNAQVLFLLVLVVSLAFSIEVLGYNSTITGFLLGVFFPRDGKTTRTLFKKLAYSIHNFVLPIYFGYMGFQFDIRDLLKHYQNILLVLLLLFSCIASRMIGTLFVCHRLKIPRIKAVLLAFVLNLKGNFELILIDVEAGRSATWWSPMIHRMLLIVVVLNTLITGPIIASILRRNENYFAHRNTSVESLDPESEFRILSCAYEPRHASGQLVLSASFGSSISPYLMHLVELPKRRRKAKLLYNQ**************GNDVLEINEAVDSFTAQTRIRISQVKIVNTFANMYEDVCNAAEDFRVTIIFLPFHKHQRIDQRLENSKEGYRTTNQKILRHAPCSVGVLVHKNQTGFQLPVAAMLFFGGADDREALALSKRIGKNSNINLTVIRFLYAA**************************VRVLRSLSRNHEIEIAKDNVFFEEFRLRYVTSGEVGLIERYVNNGIETLQVLREIMDSIEFSLFIVGKGSYGGSVMTTGLSDWEECP*LG*
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MHITQELCSSIHPFNPLVSTFVQISLMLVIAHIFNLIFKPLGQPGPISQMLAGLVLSPSFLSQINKIRSFFIQDLSAFYYRVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVSFVFGIILTYISRFVLDIKDNTPAFSITITILLANSASPVVMRLIDELKFNTSELGRLASTTSLINEVGCIIYYSSFVTVLSSKNFANAIYSIILTALLIIINMYLAKWFARWNKDSKYVSNAQVLFLLVLVVSLAFSIEVLGYNSTITGFLLGVFFPRDGKTTRTLFKKLAYSIHNFVLPIYFGYMGFQFDIRDLLKHYQNILLVLLLLFSCIASRMIGTLFVCHRLKIPRIKAVLLAFVLNLKGNFELILIDVEAGRSATWWSPMIHRMLLIVVVLNTLITGPIIASILRRNENYFAHRNTSVESLDPESEFRILSCAYEPRHASGQLVLSASFGSSISPYLMHLVELPKRRRKAKLLYNQLEDGGQYSDEEDYGGNDVLEINEAVDSFTAQTRIRISQVKIVNTFANMYEDVCNAAEDFRVTIIFLPFHKHQRIDQRLENSKEGYRTTNQKILRHAPCSVGVLVHKNQTGFQLPVAAMLFFGGADDREALALSKRIGKNSNINLTVIRFLYAAKKEEESSPSSQSSSASSPMVGEPSRKVRVLRSLSRNHEIEIAKDNVFFEEFRLRYVTSGEVGLIERYVNNGIETLQVLREIMDSIEFSLFIVGKGSYGGSVMTTGLSDWEECPELGP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query754 2.2.26 [Sep-21-2011]
Q9SAK8783 Cation/H(+) antiporter 2 yes no 0.953 0.918 0.420 1e-166
Q9SA37785 Cation/H(+) antiporter 1 no no 0.946 0.909 0.414 1e-158
Q9SIT5821 Cation/H(+) antiporter 15 no no 0.917 0.842 0.289 7e-85
Q9FFR9810 Cation/H(+) antiporter 18 no no 0.925 0.861 0.260 4e-70
Q8VYD4867 Cation/H(+) antiporter 23 no no 0.899 0.782 0.271 3e-69
Q9SUQ7820 Cation/H(+) antiporter 17 no no 0.932 0.857 0.246 7e-64
Q8L709801 Cation/H(+) antiporter 28 no no 0.904 0.851 0.265 1e-63
Q9LUN4800 Cation/H(+) antiporter 19 no no 0.929 0.876 0.259 7e-62
Q9M353842 Cation/H(+) antiporter 20 no no 0.956 0.856 0.250 5e-59
Q1HDT3811 Cation/H(+) antiporter 16 no no 0.923 0.858 0.246 2e-57
>sp|Q9SAK8|CHX2_ARATH Cation/H(+) antiporter 2 OS=Arabidopsis thaliana GN=CHX2 PE=2 SV=1 Back     alignment and function desciption
 Score =  585 bits (1509), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 318/757 (42%), Positives = 466/757 (61%), Gaps = 38/757 (5%)

Query: 14  FNPLVSTFVQISLMLVIAHIFNLIFKPLGQPGPISQMLAGLVLSPSFLSQINKIRSFFIQ 73
           FNPL + F+Q++ +LV + +F L+ KP GQ GP++Q+LAG+VLSP  LS+I K++ FF+Q
Sbjct: 16  FNPLNTMFIQMACILVFSQLFYLLLKPCGQAGPVAQILAGIVLSPVLLSRIPKVKEFFLQ 75

Query: 74  DLSAFYYRVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVS--FVFGIILTY 131
             +A YY  F+F  R  FMFLIGLE+D  ++R N   AA I     +VS    F  ++ +
Sbjct: 76  KNAADYYSFFSFALRTSFMFLIGLEVDLHFMRRNFKKAAVITLSSFVVSGLLSFASLMLF 135

Query: 132 ISRFVLDIKDNTPAFSITITILLANSASPVVMRLIDELKFNTSELGRLASTTSLINEVGC 191
           I  F   IK++   F + + + L+N+ASPVV+R I + K NT E+GRL  + +L  E+  
Sbjct: 136 IPLF--GIKEDYFTFFLVLLVTLSNTASPVVVRSIADWKLNTCEIGRLTISCALFIELTN 193

Query: 192 IIYYSSFVTVLSSKNFANAIYSIILTALLIIINMYLAKWFARWNKDSKYVSNAQVLFLLV 251
           ++ Y+  +  +S          ++ T  LI+INM LA W  + N   KY+S A+ L   +
Sbjct: 194 VVLYTIIMAFISGTIILELFLFLLATVALILINMVLAPWLPKRNPKEKYLSKAETLVFFI 253

Query: 252 LVVSLAFSIEVLGYNSTITGFLLGVFFPRDGKTTRTLFKKLAYSIHNFVLPIYFGYMGFQ 311
            ++ +  +IE    NS+++ F +G+ FPR GKT RTL ++L+Y IH FVLP+YFGY+GF+
Sbjct: 254 FLLIIGITIESYDVNSSVSVFAIGIMFPRQGKTHRTLIQRLSYPIHEFVLPVYFGYIGFR 313

Query: 312 FDIRDLLKHYQNILLVLLLLFSCIASRMIGTLFVCHRLKIPRIKAVLLAFVLNLKGNFEL 371
           F I  L K +   L +++++   IA + IG +  C  LKIP+   + L  +L++KG+  L
Sbjct: 314 FSIIALTKRFY--LGIVIIVIVTIAGKFIGVISACMYLKIPKKYWLFLPTILSVKGHVGL 371

Query: 372 ILIDVEAGRSATWWSPMIHRMLLIVVVLNTLITGPIIASILRRNENYFAHRNTSVESLDP 431
           +L+D        WW+  IH M++  +V+ TL++G + + +L+  E  FA+  TS+ES + 
Sbjct: 372 LLLDSNYSEKK-WWTTTIHDMMVAALVITTLVSGVLASFLLKTREKDFAYEKTSLESHNT 430

Query: 432 ESEFRILSCAYEPRHASGQL----VLSASFGSS--ISPYLMHLVELPKRRRKAKLLYNQL 485
             E RILSCAY  RHA G +     LS S G+S   +P LMHLV LPK+R+   + +   
Sbjct: 431 NEELRILSCAYGVRHARGAISLVSALSGSRGASDPFTPLLMHLVPLPKKRKSELMYHEHD 490

Query: 486 EDGGQYSDEEDYGGNDVLEINEAVDSFTAQTRIRISQVKIVNTFANMYEDVCNAAEDFRV 545
           EDGG  + ++++G N+ LEIN+++DSF   ++I I QVK+V    NM+E++CNA ED RV
Sbjct: 491 EDGGNANGDDEFGTNEGLEINDSIDSFAKDSKILIQQVKLVTQMLNMHEEICNATEDLRV 550

Query: 546 TIIFLPFHKHQRIDQRLENSKEGYRTTNQKILRHAPCSVGVLVHKNQTGFQLPVA----- 600
           +I+FLPFHKHQRID +  N  E +R  N+ +LRH PCS+G+ V +N TGFQ P       
Sbjct: 551 SIVFLPFHKHQRIDGKTTNDGELFRQMNRNVLRHGPCSIGIFVDRNITGFQQPHGFDSVQ 610

Query: 601 --AMLFFGGADDREALALSKRIGKNSNINLTVIRFLYAAKKEEESSPSSQSSSASSPMVG 658
             A LFFGG DDREALAL + +  N+ I+LTVI+F+            S+ S A +P+  
Sbjct: 611 HVATLFFGGPDDREALALCRWLANNTLIHLTVIQFV------------SEESKAETPVGN 658

Query: 659 EPSRKVR--VLRSLSRNHEIEIAKDNVFFEEFRLRYVTSGEVGLIERYVNNGIETLQVLR 716
             +R      +  L RN + E   D  F EEF  R+VT+G+VG IE+ V+NG  TL +LR
Sbjct: 659 AMTRDNNEVFMEVLGRN-QTEQETDRSFLEEFYNRFVTTGQVGFIEKLVSNGPHTLTILR 717

Query: 717 EIMDSIEFSLFIVGKGSYGGSVMTTGLSDWEECPELG 753
           EI +   +SLF+VGK S G   MT  + DWEECPELG
Sbjct: 718 EIGEM--YSLFVVGK-STGDCPMTVRMKDWEECPELG 751
May operate as a cation/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SA37|CHX1_ARATH Cation/H(+) antiporter 1 OS=Arabidopsis thaliana GN=CHX1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1 Back     alignment and function description
>sp|Q9FFR9|CHX18_ARATH Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 PE=2 SV=1 Back     alignment and function description
>sp|Q8VYD4|CHX23_ARATH Cation/H(+) antiporter 23, chloroplastic OS=Arabidopsis thaliana GN=CHX23 PE=1 SV=1 Back     alignment and function description
>sp|Q9SUQ7|CHX17_ARATH Cation/H(+) antiporter 17 OS=Arabidopsis thaliana GN=CHX17 PE=1 SV=1 Back     alignment and function description
>sp|Q8L709|CHX28_ARATH Cation/H(+) antiporter 28 OS=Arabidopsis thaliana GN=CHX28 PE=2 SV=2 Back     alignment and function description
>sp|Q9LUN4|CHX19_ARATH Cation/H(+) antiporter 19 OS=Arabidopsis thaliana GN=CHX19 PE=2 SV=1 Back     alignment and function description
>sp|Q9M353|CHX20_ARATH Cation/H(+) antiporter 20 OS=Arabidopsis thaliana GN=CHX20 PE=2 SV=1 Back     alignment and function description
>sp|Q1HDT3|CHX16_ARATH Cation/H(+) antiporter 16 OS=Arabidopsis thaliana GN=CHX16 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query754
255582783788 monovalent cation:proton antiporter, put 0.962 0.921 0.490 0.0
255578251780 monovalent cation:proton antiporter, put 0.954 0.923 0.510 0.0
255578247769 Na(+)/H(+) antiporter, putative [Ricinus 0.958 0.940 0.496 0.0
224072959778 cation proton exchanger [Populus trichoc 0.966 0.937 0.488 0.0
449461587783 PREDICTED: cation/H(+) antiporter 1-like 0.976 0.939 0.470 0.0
224072955742 cation proton exchanger [Populus trichoc 0.921 0.936 0.463 0.0
356542407 869 PREDICTED: cation/H(+) antiporter 1-like 0.949 0.823 0.439 1e-176
147799211781 hypothetical protein VITISV_037264 [Viti 0.970 0.937 0.438 1e-175
359479084786 PREDICTED: LOW QUALITY PROTEIN: cation/H 0.973 0.933 0.434 1e-175
296084012781 unnamed protein product [Vitis vinifera] 0.970 0.937 0.437 1e-175
>gi|255582783|ref|XP_002532167.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223528154|gb|EEF30220.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/752 (49%), Positives = 525/752 (69%), Gaps = 26/752 (3%)

Query: 13  PFNPLVSTFVQISLMLVIAHIFNLIFKPLGQPGPISQMLAGLVLSPSFLSQINKIRSFFI 72
           PFNPL++T +Q++ MLVI+HIF+LI  P GQ GPI+ ++AGLVL PS L +I +++ FFI
Sbjct: 16  PFNPLITTGMQVACMLVISHIFHLILAPSGQTGPIANIIAGLVLGPSLLCRIKQLKEFFI 75

Query: 73  QDLSAFYYRVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVSFVFGIILTYI 132
           Q  S  YY+V  F  R+ FMFLIGL+ D  Y++ N+ L++T+A GG+++  +FG    + 
Sbjct: 76  QSSSIEYYQVLTFNFRVFFMFLIGLDTDVPYMKRNLRLSSTVAYGGIIICTLFGGASAFF 135

Query: 133 SRFVLDIKDNTPAFSITITILLANSASPVVMRLIDELKFNTSELGRLASTTSLINEVGCI 192
              +L  K NT    + I ++LANSASPVV+RL  E+K +TS++GRL   +SL+NE+ C+
Sbjct: 136 ILHLLKFKYNTLLLVMIIPLILANSASPVVIRLAAEMKIDTSDVGRLGIASSLVNEMSCV 195

Query: 193 IYYSSFVTVLSSKNFANAIYSIILTALLIIINMYLAKWFARWNKDSKYVSNAQVLFLLVL 252
           + YS F++V S K F + I  +    +L+I+N YLA WF + N++ KYVSN +VL + +L
Sbjct: 196 LLYSIFISVKSWKMFGHGILCLFCIVVLVILNKYLATWFNKRNQNQKYVSNTEVLVVFIL 255

Query: 253 VVSLAFSIEVLGYNSTITGFLLGVFFPRDGKTTRTLFKKLAYSIHNFVLPIYFGYMGFQF 312
           V+++A  IE  G+ ST+  FLLG+ FPR+GKT RTL +KL YS+HNF+LPIYFG++GFQF
Sbjct: 256 VIAIAMVIEAYGFLSTLACFLLGLLFPREGKTARTLLRKLTYSVHNFMLPIYFGFVGFQF 315

Query: 313 DIRDLLKHYQNILLVLLLLFSCIASRMIGTLFVCHRLKIPRIKAVLLAFVLNLKGNFELI 372
           D+   + +++NI+++ L++      +++GTL  C  L IPR + V+LAF+LNLKG+ ELI
Sbjct: 316 DVLYFM-NFENIIMIGLMILLSTGGKIVGTLAACRYLNIPRTEGVILAFILNLKGHTELI 374

Query: 373 LIDVEAGRSATWWSPMIHRMLLIVVVLNTLITGPIIASILRRNENYFAHRNTSVESLDPE 432
           ++++   R  +WWS  +H +++IVVVL+TLI G ++  +LR  ENYFAHR T +ES DP+
Sbjct: 375 ILEL-LPRFISWWSRRLHSLVIIVVVLDTLIAGLVVVFMLRTRENYFAHRYTELESHDPD 433

Query: 433 SEFRILSCAYEPRHASGQLVLSAS-----FGSSISPYLMHLVELPKRRRKAKLLYNQLED 487
           SE R+LSC Y  RH S  + L ++     + + I+PYLMHLVELPK+RRK KL+Y+QL+D
Sbjct: 434 SELRVLSCVYASRHTSATVGLISAMSGTPYTTPIAPYLMHLVELPKKRRKTKLMYHQLQD 493

Query: 488 GGQYSDEEDYGGNDVLEINEAVDSFTAQTRIRISQVKIVNTFANMYEDVCNAAEDFRVTI 547
           G Q+SDEE+YGGNDVLEIN+ VD+F ++T+I I Q K+V ++  MYEDVC+ AED RV+I
Sbjct: 494 GDQFSDEEEYGGNDVLEINDVVDAFVSETKIMIHQRKVVASYERMYEDVCSGAEDLRVSI 553

Query: 548 IFLPFHKHQRIDQRLENSKEGYRTTNQKILRHAPCSVGVLVHKNQTGFQLP------VAA 601
           IF+  HKHQRID++LEN KEG R++NQKILRHAPCSVG+LV +  TGF+ P        A
Sbjct: 554 IFIHLHKHQRIDEKLENGKEGVRSSNQKILRHAPCSVGMLVDRGHTGFKKPGPEIVQEVA 613

Query: 602 MLFFGGADDREALALSKRIGKNSNINLTVIRFLYAAKKEEESSPSSQSSSASSPMVGEPS 661
           +LFFGG DDREAL  S RI  +  + LTVIRFL    KE+ +  ++ +S  +        
Sbjct: 614 ILFFGGPDDREALTCSNRIAIHPYLKLTVIRFLPTTSKEQLNKWTNDASHKND------- 666

Query: 662 RKVRVLRSLSRNHEIEIAKDNVFFEEFRLRYVTSGEVGLIERYVNNGIETLQVLREIMDS 721
               VL ++S + E E   ++    +F  R+V SG+V   E+YV+ G +T+  LRE+ D 
Sbjct: 667 ---EVLLAIS-DPEAENEMNDAALGDFVNRHVKSGKVAYTEKYVSTGDQTVAALREVGD- 721

Query: 722 IEFSLFIVGKGSYGGSVMTTGLSDWEECPELG 753
            ++SL IVGKG    S + +GLSDWEECPELG
Sbjct: 722 -KYSLIIVGKGRREHSPLLSGLSDWEECPELG 752

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255578251|ref|XP_002529993.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223530516|gb|EEF32398.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255578247|ref|XP_002529991.1| Na(+)/H(+) antiporter, putative [Ricinus communis] gi|223530514|gb|EEF32396.1| Na(+)/H(+) antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224072959|ref|XP_002303942.1| cation proton exchanger [Populus trichocarpa] gi|222841374|gb|EEE78921.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449461587|ref|XP_004148523.1| PREDICTED: cation/H(+) antiporter 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224072955|ref|XP_002303941.1| cation proton exchanger [Populus trichocarpa] gi|222841373|gb|EEE78920.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356542407|ref|XP_003539658.1| PREDICTED: cation/H(+) antiporter 1-like [Glycine max] Back     alignment and taxonomy information
>gi|147799211|emb|CAN74725.1| hypothetical protein VITISV_037264 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359479084|ref|XP_002272831.2| PREDICTED: LOW QUALITY PROTEIN: cation/H(+) antiporter 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296084012|emb|CBI24400.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query754
TAIR|locus:2206360783 CHX2 "cation/H+ exchanger 2" [ 0.954 0.919 0.407 1.2e-143
TAIR|locus:2032805785 ATCHX1 [Arabidopsis thaliana ( 0.948 0.910 0.410 2.9e-142
TAIR|locus:2054152821 CHX15 "cation/hydrogen exchang 0.945 0.868 0.278 4.3e-77
TAIR|locus:2160457810 CHX18 "cation/H+ exchanger 18" 0.805 0.749 0.255 7.7e-68
TAIR|locus:2090462800 CHX19 "cation/H+ exchanger 19" 0.806 0.76 0.258 6.1e-62
TAIR|locus:2031968867 CHX23 "cation/H+ exchanger 23" 0.805 0.700 0.261 3.8e-61
TAIR|locus:2128484820 CHX17 "cation/H+ exchanger 17" 0.755 0.695 0.234 1.4e-54
TAIR|locus:2024578811 CHX16 "cation/H+ exchanger 16" 0.537 0.499 0.229 2.3e-52
TAIR|locus:2007392829 CHX14 "cation/hydrogen exchang 0.799 0.727 0.226 2.9e-43
TAIR|locus:2084370842 CHX20 "cation/H+ exchanger 20" 0.580 0.520 0.233 2.1e-42
TAIR|locus:2206360 CHX2 "cation/H+ exchanger 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1404 (499.3 bits), Expect = 1.2e-143, P = 1.2e-143
 Identities = 308/756 (40%), Positives = 441/756 (58%)

Query:    14 FNPLVSTFVQISLMLVIAHIFNLIFKPLGQPGPISQMLAGLVLSPSFLSQINKIRSFFIQ 73
             FNPL + F+Q++ +LV + +F L+ KP GQ GP++Q+LAG+VLSP  LS+I K++ FF+Q
Sbjct:    16 FNPLNTMFIQMACILVFSQLFYLLLKPCGQAGPVAQILAGIVLSPVLLSRIPKVKEFFLQ 75

Query:    74 DLSAFYYRVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVSFV--FGIILTY 131
               +A YY  F+F  R  FMFLIGLE+D  ++R N   AA I     +VS +  F  ++ +
Sbjct:    76 KNAADYYSFFSFALRTSFMFLIGLEVDLHFMRRNFKKAAVITLSSFVVSGLLSFASLMLF 135

Query:   132 ISRFVLDIKDNTPAFSITITILLANSASPVVMRLIDELKFNTSELGRLASTTSLINEVGC 191
             I  F   IK++   F + + + L+N+ASPVV+R I + K NT E+GRL  + +L  E+  
Sbjct:   136 IPLF--GIKEDYFTFFLVLLVTLSNTASPVVVRSIADWKLNTCEIGRLTISCALFIELTN 193

Query:   192 IIYYSSFVTVLSSKNFANAIYSIILTALLIIINMYLAKWFARWNKDSKYVSNAQXXXXXX 251
             ++ Y+  +  +S          ++ T  LI+INM LA W  + N   KY+S A+      
Sbjct:   194 VVLYTIIMAFISGTIILELFLFLLATVALILINMVLAPWLPKRNPKEKYLSKAETLVFFI 253

Query:   252 XXXXXAFSIEVLGYNSTITGFLLGVFFPRDGKTTRTLFKKLAYSIHNFVLPIYFGYMGFQ 311
                    +IE    NS+++ F +G+ FPR GKT RTL ++L+Y IH FVLP+YFGY+GF+
Sbjct:   254 FLLIIGITIESYDVNSSVSVFAIGIMFPRQGKTHRTLIQRLSYPIHEFVLPVYFGYIGFR 313

Query:   312 FDIRDLLKHYQNIXXXXXXXFSCIASRMIGTLFVCHRLKIPRIKAVLLAFVLNLKGNFEL 371
             F I  L K +             IA + IG +  C  LKIP+   + L  +L++KG+  L
Sbjct:   314 FSIIALTKRFY--LGIVIIVIVTIAGKFIGVISACMYLKIPKKYWLFLPTILSVKGHVGL 371

Query:   372 ILIDVEAGRSATWWSPMIHRMXXXXXXXXXXXXGPIIASILRRNENYFAHRNTSVESLDP 431
             +L+D        WW+  IH M            G + + +L+  E  FA+  TS+ES + 
Sbjct:   372 LLLDSNYSEKK-WWTTTIHDMMVAALVITTLVSGVLASFLLKTREKDFAYEKTSLESHNT 430

Query:   432 ESEFRILSCAYEPRHASGQL----VLSASFGSS--ISPYLMHLVELPKRRRKAKLLYNQL 485
               E RILSCAY  RHA G +     LS S G+S   +P LMHLV LPK+R K++L+Y++ 
Sbjct:   431 NEELRILSCAYGVRHARGAISLVSALSGSRGASDPFTPLLMHLVPLPKKR-KSELMYHEH 489

Query:   486 -EDGGQYSDEEDYGGNDVLEINEAVDSFTAQTRIRISQVKIVNTFANMYEDVCNAAEDFR 544
              EDGG  + ++++G N+ LEIN+++DSF   ++I I QVK+V    NM+E++CNA ED R
Sbjct:   490 DEDGGNANGDDEFGTNEGLEINDSIDSFAKDSKILIQQVKLVTQMLNMHEEICNATEDLR 549

Query:   545 VTIIFLPFHKHQRIDQRLENSKEGYRTTNQKILRHAPCSVGVLVHKNQTGFQLPVA---- 600
             V+I+FLPFHKHQRID +  N  E +R  N+ +LRH PCS+G+ V +N TGFQ P      
Sbjct:   550 VSIVFLPFHKHQRIDGKTTNDGELFRQMNRNVLRHGPCSIGIFVDRNITGFQQPHGFDSV 609

Query:   601 ---AMLFFGGADDREALALSKRIGKNSNINLTVIRFLYXXXXXXXXXXXXXXXXXXXXMV 657
                A LFFGG DDREALAL + +  N+ I+LTVI+F+                      +
Sbjct:   610 QHVATLFFGGPDDREALALCRWLANNTLIHLTVIQFVSEESKAETPVGNAMTRDNNEVFM 669

Query:   658 GEPXXXXXXXXXXXXNHEIEIAKDNVFFEEFRLRYVTSGEVGLIERYVNNGIETLQVLRE 717
                             ++ E   D  F EEF  R+VT+G+VG IE+ V+NG  TL +LRE
Sbjct:   670 -----------EVLGRNQTEQETDRSFLEEFYNRFVTTGQVGFIEKLVSNGPHTLTILRE 718

Query:   718 IMDSIEFSLFIVGKGSYGGSVMTTGLSDWEECPELG 753
             I +   +SLF+VGK S G   MT  + DWEECPELG
Sbjct:   719 IGEM--YSLFVVGK-STGDCPMTVRMKDWEECPELG 751
GO:0006812 "cation transport" evidence=IEA;IC
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0035725 "sodium ion transmembrane transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005451 "monovalent cation:hydrogen antiporter activity" evidence=NAS
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0009827 "plant-type cell wall modification" evidence=RCA
GO:0009860 "pollen tube growth" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
TAIR|locus:2032805 ATCHX1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2054152 CHX15 "cation/hydrogen exchanger 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160457 CHX18 "cation/H+ exchanger 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090462 CHX19 "cation/H+ exchanger 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031968 CHX23 "cation/H+ exchanger 23" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128484 CHX17 "cation/H+ exchanger 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024578 CHX16 "cation/H+ exchanger 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007392 CHX14 "cation/hydrogen exchanger 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084370 CHX20 "cation/H+ exchanger 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SAK8CHX2_ARATHNo assigned EC number0.42000.95350.9182yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query754
PLN03159832 PLN03159, PLN03159, cation/H(+) antiporter 15; Pro 1e-95
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 8e-39
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 7e-36
TIGR00932273 TIGR00932, 2a37, transporter, monovalent cation:pr 6e-20
PRK03562621 PRK03562, PRK03562, glutathione-regulated potassiu 0.001
COG0025429 COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiport 0.004
>gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
 Score =  315 bits (808), Expect = 1e-95
 Identities = 218/767 (28%), Positives = 384/767 (50%), Gaps = 53/767 (6%)

Query: 14  FNPL---VSTFV-QISLMLVIAHIFNLIFKPLGQPGPISQMLAGLVLSPSFLSQINKIRS 69
            NPL   +  F+ Q++L++V   +   I KP  QP  IS++L G++L PS L Q     +
Sbjct: 34  DNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEVFAN 93

Query: 70  FFIQDLSAFYYRVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVSFVFGIIL 129
                 S       A +  + F+FL+G+EMD + +R     A  IA  G+ + F  G+  
Sbjct: 94  TIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAF 153

Query: 130 TYI----SRFVLDIKDNTPAFSITITILLANSASPVVMRLIDELKFNTSELGRLASTTSL 185
           ++I    SR V     +   F + + + L+ +A PV+ R++ E+K   +ELGR+A + +L
Sbjct: 154 SFIFHQVSRNV-----HQGTFILFLGVALSVTAFPVLARILAEIKLINTELGRIAMSAAL 208

Query: 186 INEVGCIIYYSSFVTVLSSKNFA-NAIYSIILTALLIIINMYLAK----WFARWNKDSKY 240
           +N++   I  +  + +  + + +  +++ ++ +   ++   Y+ +    W  R   + + 
Sbjct: 209 VNDMCAWILLALAIALAENDSTSLASLWVLLSSVAFVLFCFYVVRPGIWWIIRRTPEGET 268

Query: 241 VSNAQVLFLLVLVVSLAFSIEVLGYNSTITGFLLGVFFPRDGKTTRTLFKKLAYSIHNFV 300
            S   +  +L  V+   F  + +G +S    F+ G+  P +G    TL +KL   +   +
Sbjct: 269 FSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIP-NGPLGVTLIEKLEDFVSGLL 327

Query: 301 LPIYFGYMGFQFDIRDLLKHYQNILLVLLLLFSCIASRMIGTLFVCHRLKIPRIKAVLLA 360
           LP++F   G + ++  +       LLVL+++ +    +++GT+ +     +P  + + L 
Sbjct: 328 LPLFFAISGLKTNVTKIQGPATWGLLVLVIIMASAG-KIMGTIIIAFFYTMPFREGITLG 386

Query: 361 FVLNLKGNFELILIDVEAGRSATWWSPMIHRMLLIVVVLNTLITGPIIASILRRNENYFA 420
           F++N KG  E+I+++V  GR           ++++V V  T +  P++  + R       
Sbjct: 387 FLMNTKGLVEMIVLNV--GRDQEVLDDESFAVMVLVAVAMTALITPVVTVVYRPARRLVG 444

Query: 421 HRNTSVESLDPESEFRILSCAYEPRHASGQL-VLSASFGSSISP---YLMHLVELPKRRR 476
           ++  +++    ++E R+L C + PR+    + +L AS  +  SP   Y++HLVEL  R  
Sbjct: 445 YKRRTIQRSKHDAELRMLVCVHTPRNVPTIINLLEASHPTKRSPICIYVLHLVELTGRA- 503

Query: 477 KAKLLYNQLEDGGQYSDEEDYGGNDVLEINEAVDSFTAQT-RIRISQVKIVNTFANMYED 535
            A L+ +     G+ +       +D   I  A +++      + +  +  ++ ++ M+ED
Sbjct: 504 SAMLIVHNTRKSGRPALNRTQAQSD--HIINAFENYEQHAGCVSVQPLTAISPYSTMHED 561

Query: 536 VCNAAEDFRVTIIFLPFHKHQRIDQRLENSKEGYRTTNQKILRHAPCSVGVLVHKNQTGF 595
           VCN AED RV++I +PFHK Q +D  +E +   +R  NQ +L +APCSVG+LV +  +G 
Sbjct: 562 VCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGA 621

Query: 596 QLPVA-------AMLFFGGADDREALALSKRIGKNSNINLTVIRFLYAA-KKEEESSPSS 647
               +       A+LFFGG DDREALA + R+ ++  I LTV+RF+         S P+S
Sbjct: 622 TRLASNQVSHHVAVLFFGGPDDREALAYAWRMSEHPGITLTVMRFIPGEDAAPTASQPAS 681

Query: 648 QSSSASSPMVGEPSRKVRVLRSLSRNHEIEIAKDNVFFEEFRLRYVTSGEVGLIERYVNN 707
             S    P V    +K R L             D  +  EFR R   +  +   E+ V+N
Sbjct: 682 SPSDPRIPTVETDGKKERQL-------------DEEYINEFRARNAGNESIVYTEKVVSN 728

Query: 708 GIETLQVLREIMDSIEFSLFIVGKGSYGGSVMTTGLSDWEECPELGP 754
           G ET+  +R  MDS    LFIVG+G    S +T GL+DW ECPELG 
Sbjct: 729 GEETVAAIRS-MDSAH-DLFIVGRGQGMISPLTAGLTDWSECPELGA 773

Length = 832
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information
>gnl|CDD|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>gnl|CDD|235131 PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>gnl|CDD|223104 COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 754
PLN03159832 cation/H(+) antiporter 15; Provisional 100.0
KOG1650769 consensus Predicted K+/H+-antiporter [Inorganic io 100.0
PRK03562621 glutathione-regulated potassium-efflux system prot 100.0
PRK03659601 glutathione-regulated potassium-efflux system prot 100.0
PRK10669558 putative cation:proton antiport protein; Provision 100.0
COG0475397 KefB Kef-type K+ transport systems, membrane compo 100.0
PRK05326562 potassium/proton antiporter; Reviewed 100.0
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 100.0
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 100.0
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 100.0
TIGR00844810 c_cpa1 na(+)/h(+) antiporter. This model is specif 99.96
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.96
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.92
COG3263574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 99.91
TIGR00840559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.91
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 99.75
KOG4505467 consensus Na+/H+ antiporter [Inorganic ion transpo 99.65
KOG1965575 consensus Sodium/hydrogen exchanger protein [Inorg 99.65
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 99.45
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 99.07
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 98.94
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 98.94
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 98.94
PRK11175305 universal stress protein UspE; Provisional 98.93
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 98.87
KOG1966670 consensus Sodium/hydrogen exchanger protein [Inorg 98.83
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 98.8
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 98.7
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 98.63
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 98.19
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 98.04
PF03812314 KdgT: 2-keto-3-deoxygluconate permease; InterPro: 97.83
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 97.61
cd01987124 USP_OKCHK USP domain is located between the N-term 97.52
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 97.26
TIGR00793314 kdgT 2-keto-3-deoxygluconate transporter. This fam 97.22
PF00582140 Usp: Universal stress protein family; InterPro: IP 97.19
PRK15005144 universal stress protein F; Provisional 97.11
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 97.03
PRK15456142 universal stress protein UspG; Provisional 97.03
COG3180352 AbrB Putative ammonia monooxygenase [General funct 97.01
cd00293130 USP_Like Usp: Universal stress protein family. The 96.82
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 96.75
PRK03562 621 glutathione-regulated potassium-efflux system prot 96.71
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 96.62
PRK09982142 universal stress protein UspD; Provisional 96.59
PRK05274326 2-keto-3-deoxygluconate permease; Provisional 96.58
cd00293130 USP_Like Usp: Universal stress protein family. The 96.49
COG0385319 Predicted Na+-dependent transporter [General funct 96.47
PF00582140 Usp: Universal stress protein family; InterPro: IP 96.42
PRK10669558 putative cation:proton antiport protein; Provision 96.39
PRK03659601 glutathione-regulated potassium-efflux system prot 96.31
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 96.24
PRK15118144 universal stress global response regulator UspA; P 96.23
COG0475397 KefB Kef-type K+ transport systems, membrane compo 96.2
PRK11175305 universal stress protein UspE; Provisional 96.18
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 96.13
PRK09982142 universal stress protein UspD; Provisional 96.0
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 95.95
PRK05326562 potassium/proton antiporter; Reviewed 95.91
COG2855334 Predicted membrane protein [Function unknown] 95.81
TIGR00698335 conserved hypothetical integral membrane protein. 95.68
TIGR00841286 bass bile acid transporter. Functionally character 95.49
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 95.44
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 95.4
PF03956191 DUF340: Membrane protein of unknown function (DUF3 95.39
cd01987124 USP_OKCHK USP domain is located between the N-term 95.38
PRK10116142 universal stress protein UspC; Provisional 95.26
TIGR00832328 acr3 arsenical-resistance protein. The first prote 95.2
PRK10116142 universal stress protein UspC; Provisional 95.11
PRK10537393 voltage-gated potassium channel; Provisional 95.09
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 95.01
PLN03159 832 cation/H(+) antiporter 15; Provisional 94.91
PRK12652 357 putative monovalent cation/H+ antiporter subunit E 94.71
PF03390414 2HCT: 2-hydroxycarboxylate transporter family; Int 94.59
COG0589154 UspA Universal stress protein UspA and related nuc 94.49
PRK15005144 universal stress protein F; Provisional 94.47
PF01758187 SBF: Sodium Bile acid symporter family; InterPro: 94.45
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 94.41
TIGR00698335 conserved hypothetical integral membrane protein. 94.33
PRK15118144 universal stress global response regulator UspA; P 94.27
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 94.27
PF06826169 Asp-Al_Ex: Predicted Permease Membrane Region; Int 94.25
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 93.46
PRK15456142 universal stress protein UspG; Provisional 93.44
TIGR01625154 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplicati 93.18
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 93.04
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 92.6
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 92.58
PRK03818552 putative transporter; Validated 92.57
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 90.78
PF13593313 DUF4137: SBF-like CPA transporter family (DUF4137) 90.03
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 89.95
PRK04972558 putative transporter; Provisional 89.5
TIGR00946321 2a69 he Auxin Efflux Carrier (AEC) Family. 88.34
COG3329372 Predicted permease [General function prediction on 88.3
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 87.85
PF03547385 Mem_trans: Membrane transport protein; InterPro: I 87.52
COG3493438 CitS Na+/citrate symporter [Energy production and 86.37
PRK04972558 putative transporter; Provisional 85.44
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 84.78
TIGR00946321 2a69 he Auxin Efflux Carrier (AEC) Family. 84.23
COG0679311 Predicted permeases [General function prediction o 84.01
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 83.49
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 83.14
PRK03818552 putative transporter; Validated 82.51
PF03956191 DUF340: Membrane protein of unknown function (DUF3 81.9
COG2985544 Predicted permease [General function prediction on 81.65
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 81.64
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.7e-138  Score=1226.02  Aligned_cols=728  Identities=27%  Similarity=0.504  Sum_probs=633.8

Q ss_pred             ccccccCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHhcCccccccccc-ccccccccchHHHH
Q 043087            3 ITQELCSSIHPFN-PLVSTFVQISLMLVIAHIFNLIFKPLGQPGPISQMLAGLVLSPSFLSQINK-IRSFFIQDLSAFYY   80 (754)
Q Consensus         3 ~~~~~~~~~~~l~-~l~~~l~~i~lil~~~~~~~~l~~rl~lP~ivg~ilaGillGP~~lg~i~~-~~~~f~~~~~~~~~   80 (754)
                      ..+|.|.|+||++ ++|.+++|+++++++++++++++||+|||+++|||++|+++||+++|+++. .+.+||.++ .+.+
T Consensus        26 ~s~g~~~g~~pl~~~l~~~llql~lil~~a~l~~~ll~rl~~P~ivgeIlaGIlLGPs~lg~i~~~~~~~fp~~~-~~~l  104 (832)
T PLN03159         26 TTNGIWQGDNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEVFANTIFPLRS-VMVL  104 (832)
T ss_pred             cCCcccccCCcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHhcCHhhhCcChhhhhhcCCcch-HHHH
Confidence            3568999999999 999999999999999999999999999999999999999999999999876 456888765 4456


Q ss_pred             HHHHHHHHHHHHHHHhhccChhHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCchHHHHHHHHHHhcccHH
Q 043087           81 RVFAFISRILFMFLIGLEMDTAYLRTNMDLAATIASGGLLVSFVFGIILTYISRFVLDIKDNTPAFSITITILLANSASP  160 (754)
Q Consensus        81 ~~l~~igli~llF~~Gle~d~~~l~~~~k~~~~i~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~i~~~ls~Ts~~  160 (754)
                      +.++++|++++||++|+|+|++.+|+++|+++.+|+.++++|+++|+++++++ +............+++++++|+||+|
T Consensus       105 ~~la~lGlillmFliGLE~Dl~~lr~~~k~a~~ia~~~~ilpf~lg~~~~~~l-~~~~~~~~~~~~~l~~g~alS~Ts~p  183 (832)
T PLN03159        105 ETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIF-HQVSRNVHQGTFILFLGVALSVTAFP  183 (832)
T ss_pred             HHHHHHHHHHHHHHHHHcCcHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH-hhcccccchhHHHHHHHHHHHHhhHH
Confidence            88999999999999999999999999999999999999999999998888766 43221122345578999999999999


Q ss_pred             HHHHHHHhcCccCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc--hh--HHHH-HHHHHHHHHHHHHHHHHHHHHHc
Q 043087          161 VVMRLIDELKFNTSELGRLASTTSLINEVGCIIYYSSFVTVLSSKN--FA--NAIY-SIILTALLIIINMYLAKWFARWN  235 (754)
Q Consensus       161 vv~~lL~e~~~l~s~~g~l~ls~a~~~Di~~i~ll~~~~~~~~~~~--~~--~~~l-~~~~~~~~~~v~r~~~~~l~~~~  235 (754)
                      +++++|+|+|+++|+.||+++++++++|+++|++++++.++...+.  ..  +.++ .+++++++++++|+++.|+.+++
T Consensus       184 Vv~riL~Elkll~s~~GrlaLsaavv~Dl~~~ilLav~~~l~~~~~~~~~~l~~~l~~~~f~~~~~~v~r~~~~~~~r~~  263 (832)
T PLN03159        184 VLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAENDSTSLASLWVLLSSVAFVLFCFYVVRPGIWWIIRRT  263 (832)
T ss_pred             HHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999998877654332  11  1222 23345566778899999999999


Q ss_pred             cCCCccchhHHHHHHHHHHHHHHHHHHhCchHhHHHHHHHhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcccchh
Q 043087          236 KDSKYVSNAQVLFLLVLVVSLAFSIEVLGYNSTITGFLLGVFFPRDGKTTRTLFKKLAYSIHNFVLPIYFGYMGFQFDIR  315 (754)
Q Consensus       236 ~~~~~~~~~~~~~vl~~~l~~~~~a~~~G~s~~lGaflaGl~i~~~~~~~~~~~ek~~~~~~~~f~plFF~~~G~~~dl~  315 (754)
                      +++++.++.++.++++++++++++++.+|+|+++|||++|+++|+ +|.++.+.+|++.++.++|+|+||+++||++|+.
T Consensus       264 ~~~~~~~e~~v~~il~~vl~~a~lae~~Gl~~ilGAFlaGl~lp~-~~~~~~l~ekle~~~~~lflPlFFv~vGl~idl~  342 (832)
T PLN03159        264 PEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPN-GPLGVTLIEKLEDFVSGLLLPLFFAISGLKTNVT  342 (832)
T ss_pred             cCCCCcccchhHHHHHHHHHHHHHHHHhCccHHHHHHHHhhccCC-cchHHHHHHHHHHHHHHHHHHHHHHHhhheeeHH
Confidence            988888899999999999999999999999999999999999995 6888999999999999999999999999999998


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHhhhhhhHHHHHHHHhhhccccccchhhHHHHHH
Q 043087          316 DLLKHYQNILLVLLLLFSCIASRMIGTLFVCHRLKIPRIKAVLLAFVLNLKGNFELILIDVEAGRSATWWSPMIHRMLLI  395 (754)
Q Consensus       316 ~l~~~~~~~~~~~~~~~~~~~~K~~~~~l~~~~~~~~~~~~~~lg~~l~~kG~~~l~l~~~~~~~~~ii~~~~~~~~lv~  395 (754)
                      .+.+. ..|..+++++++++++|+++++++++++|+|++|++.+|++|++||+++++++++|++ .|++ +++.|+++++
T Consensus       343 ~l~~~-~~~~~~~~liv~a~~gK~~g~~l~a~~~g~~~~eal~lG~lm~~kG~~~Lii~~ig~~-~gvi-~~~~f~~lVl  419 (832)
T PLN03159        343 KIQGP-ATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRD-QEVL-DDESFAVMVL  419 (832)
T ss_pred             HhcCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccHHHHHHHHHHHh-cCcc-CchhhhHHHH
Confidence            88654 4566667777888999999999999999999999999999999999999999999999 9999 9999999999


Q ss_pred             HHHHHHHhHHHHHHHHhccccccccccccccccCCCCCceeEEEEeecCCCcccchhh-hcccC---CCCcceeeeeecc
Q 043087          396 VVVLNTLITGPIIASILRRNENYFAHRNTSVESLDPESEFRILSCAYEPRHASGQLVL-SASFG---SSISPYLMHLVEL  471 (754)
Q Consensus       396 ~~vls~~i~~pl~~~l~~~~~~~~~~~~~~i~~~~~~~e~rIlic~~~~~~~~~~i~l-~~~~~---~p~~v~~l~lVel  471 (754)
                      +++++|.+.+|++.++|+|.||+..|++|++|+.+++.|+|||+|+|++++++++++| +++++   +|+++|++|+||+
T Consensus       420 ~avl~T~i~~Plv~~ly~p~rk~~~~~~r~i~~~~~~~elriL~cv~~~~~v~~li~Lle~s~~t~~sp~~vy~lhLveL  499 (832)
T PLN03159        420 VAVAMTALITPVVTVVYRPARRLVGYKRRTIQRSKHDAELRMLVCVHTPRNVPTIINLLEASHPTKRSPICIYVLHLVEL  499 (832)
T ss_pred             HHHHHHHHHHHHHHHHhCHHhhhccccccccccCCCCCceeEEEEeccCCcHHHHHHHHHhcCCCCCCCceEEEEEEEee
Confidence            9988888999999999999999999999999999999999999999999999999999 99877   9999999999999


Q ss_pred             ccccchhhhhhhhccCCC-CCCCCcccCCCchhhHhHHHHhhhcc-CceeEEEeEEeeCCCchHHHHHHHHhccCccEEE
Q 043087          472 PKRRRKAKLLYNQLEDGG-QYSDEEDYGGNDVLEINEAVDSFTAQ-TRIRISQVKIVNTFANMYEDVCNAAEDFRVTIIF  549 (754)
Q Consensus       472 ~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~il~i~~a~~~~~~~-~~V~v~~~~~vs~~~~m~edI~~~A~e~~a~LIi  549 (754)
                      ++| +.+..++|+..+.. +..++....+|+++   ++|++|+++ +.|++|++|++||+++||||||+.|+|+++++||
T Consensus       500 ~~r-~~~~l~~h~~~~~~~~~~~~~~~~~~~i~---~af~~~~~~~~~v~v~~~t~vs~~~~mh~dIc~~A~d~~~slIi  575 (832)
T PLN03159        500 TGR-ASAMLIVHNTRKSGRPALNRTQAQSDHII---NAFENYEQHAGCVSVQPLTAISPYSTMHEDVCNLAEDKRVSLII  575 (832)
T ss_pred             cCC-CccceeeeecccccccccccccccccHHH---HHHHHHHhhcCceEEEEEEEEeCcccHHHHHHHHHHhcCCCEEE
Confidence            999 55556666544322 11112223478777   999999865 5899999999999999999999999999999999


Q ss_pred             ecCCCCCcccccccccchhhhHHHHHHhccCCCceEEEecCCCCCCCC------CcE-EEEeccCcchHHHHHHHHHHhh
Q 043087          550 LPFHKHQRIDQRLENSKEGYRTTNQKILRHAPCSVGVLVHKNQTGFQL------PVA-AMLFFGGADDREALALSKRIGK  622 (754)
Q Consensus       550 lpfhk~~~~dg~~~~~~~~~r~~n~~Vl~~apCsVgIlvdrg~~~~~~------~~~-~~~f~GG~ddreaL~~a~rma~  622 (754)
                      +||||+|+.||++++.++.+|.+|+|||++||||||||||||..+.++      ..+ +++|+|||||||||+||+|||+
T Consensus       576 lpfhk~~~~dg~~~~~~~~~r~~n~~VL~~ApCsVgIlVDRg~~~~~~~~~~~~~~~v~~~F~GG~DDREALa~a~rma~  655 (832)
T PLN03159        576 IPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGATRLASNQVSHHVAVLFFGGPDDREALAYAWRMSE  655 (832)
T ss_pred             ECCCCccCCCCCccccCchHHHHHHHHHccCCCCEEEEEeCCCCccccccccccceeEEEEecCCcchHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999653221      112 9999999999999999999999


Q ss_pred             CCCEEEEEEEeeecccccccCCCCCCCCCCCCCCCCCCcccchhhhcccccchhhHhhHHHHHHHHHhhccCCCceEEEE
Q 043087          623 NSNINLTVIRFLYAAKKEEESSPSSQSSSASSPMVGEPSRKVRVLRSLSRNHEIEIAKDNVFFEEFRLRYVTSGEVGLIE  702 (754)
Q Consensus       623 ~~~v~ltv~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~d~~~~~~f~~~~~~~~~v~y~e  702 (754)
                      ||++++||+||++.+...++. .     +.+  +.+    +++.......++++|+++||++++|||.+++++++|.|+|
T Consensus       656 ~p~v~lTVirf~~~~~~~~~~-~-----~~~--~~~----~~~~~~~~~~~~~~e~~~D~~~~~ef~~~~~~~~~v~y~E  723 (832)
T PLN03159        656 HPGITLTVMRFIPGEDAAPTA-S-----QPA--SSP----SDPRIPTVETDGKKERQLDEEYINEFRARNAGNESIVYTE  723 (832)
T ss_pred             CCCeEEEEEEEEccccccccc-c-----ccc--ccc----cccccccccccchhHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence            999999999999753322110 0     000  000    1111222333356899999999999999999999999999


Q ss_pred             EEecChHHHHHHHHHhhcCCceeEEEEccCCCCCCcccccCccCCCCCCCCC
Q 043087          703 RYVNNGIETLQVLREIMDSIEFSLFIVGKGSYGGSVMTTGLSDWEECPELGP  754 (754)
Q Consensus       703 ~~v~~~~~~~~~~~~~~~~~~~dL~iVGr~~~~~~~~~~gl~~w~e~pELG~  754 (754)
                      |+|+||+||+++||+|+++  |||+||||+|+.+|++|+||+||+|||||||
T Consensus       724 ~~V~~~~e~~~~l~~~~~~--ydL~iVGr~~~~~~~~~~gL~~w~e~pELG~  773 (832)
T PLN03159        724 KVVSNGEETVAAIRSMDSA--HDLFIVGRGQGMISPLTAGLTDWSECPELGA  773 (832)
T ss_pred             EecCCHHHHHHHHHHhhcc--CcEEEEecCCCCCcchhccccccccCCccch
Confidence            9999999999999999998  9999999999888999999999999999997

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>COG3180 AbrB Putative ammonia monooxygenase [General function prediction only] Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PRK05274 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>COG0385 Predicted Na+-dependent transporter [General function prediction only] Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>TIGR00841 bass bile acid transporter Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>TIGR00832 acr3 arsenical-resistance protein Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>PRK10537 voltage-gated potassium channel; Provisional Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>TIGR01625 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplication domain Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137) Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family Back     alignment and domain information
>COG3329 Predicted permease [General function prediction only] Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea Back     alignment and domain information
>COG3493 CitS Na+/citrate symporter [Energy production and conversion] Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family Back     alignment and domain information
>COG0679 Predicted permeases [General function prediction only] Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>COG2985 Predicted permease [General function prediction only] Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query754
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 65.6 bits (159), Expect = 4e-11
 Identities = 104/662 (15%), Positives = 204/662 (30%), Gaps = 156/662 (23%)

Query: 127 IILTYISRFV--LDIKDNTPAFSITIT------ILLANSASPVVMRLIDELKFNTSELGR 178
           I+  +   FV   D KD        ++      I+++  A    +RL   L     E+  
Sbjct: 21  ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM-- 78

Query: 179 LASTTSLINEVGCIIYYSSFVTVLSSKNFANAIYSIILTAL-------LIIINMYLAKWF 231
                              FV  +   N     Y  +++ +        ++  MY+ +  
Sbjct: 79  ----------------VQKFVEEVLRIN-----YKFLMSPIKTEQRQPSMMTRMYIEQRD 117

Query: 232 ARWNKD---SKY-VSNAQVLFLLVLVVSLAFSIEVLGYNSTIT--GFLLGVFFPRDGKTT 285
             +N +   +KY VS  Q        + L  ++  L     +   G +LG      GKT 
Sbjct: 118 RLYNDNQVFAKYNVSRLQ------PYLKLRQALLELRPAKNVLIDG-VLGS-----GKTW 165

Query: 286 RTLFKKLAYSIH-NFVLPIYFGYMGFQFDIRDLLKHYQNILLVLLLLFSCIASRMIGTLF 344
             L   L+Y +       I++  +        +L+  Q +L  +   ++  +        
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI-- 223

Query: 345 VCHRLKIPRIKAVLLAFVLNLKGNFEL-ILIDVEAGRSATWWSPM-IH-RMLLI---VVV 398
              +L+I  I+A L   + +      L +L++V   ++A  W+   +  ++LL      V
Sbjct: 224 ---KLRIHSIQAELRRLLKSKPYENCLLVLLNV---QNAKAWNAFNLSCKILLTTRFKQV 277

Query: 399 LNTLITGPIIASILRRNENYFAHRNTSVESLDPESEF-RILSCAYE--PRHASGQ--LVL 453
            + L         L  +           +SL       + L C  +  PR         L
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEV--KSL-----LLKYLDCRPQDLPREVLTTNPRRL 330

Query: 454 SASFGSSISPYLMHL-----VELPKRRRKAKLLYNQLEDG---GQYSD----EEDYGGND 501
           S     SI   L        V   K     +   N LE       +              
Sbjct: 331 S-IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS----- 384

Query: 502 VLEINEAVDSFTAQTRIRISQVKIVNTFANMYEDVCNAAEDFRVTI--IFLPFHKHQRID 559
              I   + S      I+   + +VN     Y  V    ++  ++I  I+L        +
Sbjct: 385 -AHIPTILLSLIWFDVIKSDVMVVVNKLHK-YSLVEKQPKESTISIPSIYLELKVKLENE 442

Query: 560 QRLENSKEGYRTTNQKILRHAPCSVGVLVHKNQTGFQLPVAAMLFF-------GGADDRE 612
             L          ++ I+ H      +    +      P     F+          +  E
Sbjct: 443 YAL----------HRSIVDH----YNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE 488

Query: 613 ALALSKRIGKNSNINLTVIRFLYAAKKEEESSPSSQSSSASSPMVGEPSRKVRVLRSLSR 672
            + L + +     ++    RFL   K   +S+  + S S  +            L+ L +
Sbjct: 489 RMTLFRMV----FLDF---RFL-EQKIRHDSTAWNASGSILN-----------TLQQL-K 528

Query: 673 NHEIEIAKDNVFFEEFRLRYVTSGEVGLIERYVNNGIETLQVLREIMDSIEFSLFIVGKG 732
            ++  I  ++  +E           V  I  ++   IE   +  +  D +  +L    + 
Sbjct: 529 FYKPYICDNDPKYERL---------VNAILDFLPK-IEENLICSKYTDLLRIALMAEDEA 578

Query: 733 SY 734
            +
Sbjct: 579 IF 580
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query754
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.89
3mt0_A290 Uncharacterized protein PA1789; structural genomic 99.09
3loq_A294 Universal stress protein; structural genomics, PSI 98.96
3olq_A319 Universal stress protein E; structural genomics, P 98.87
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 98.86
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 98.82
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 97.67
3zux_A332 Transporter, ASBTNM; transport protein, membrane p 97.67
3s3t_A146 Nucleotide-binding protein, universal stress PROT 97.65
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 97.44
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 97.43
3fg9_A156 Protein of universal stress protein USPA family; A 97.42
3fdx_A143 Putative filament protein / universal stress PROT; 97.39
3dlo_A155 Universal stress protein; unknown function, struct 97.32
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 97.3
3tnj_A150 Universal stress protein (USP); structural genomic 97.13
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 97.09
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 97.03
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 96.87
2z08_A137 Universal stress protein family; uncharacterized c 96.8
3dlo_A155 Universal stress protein; unknown function, struct 96.69
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 96.66
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 96.65
3s3t_A146 Nucleotide-binding protein, universal stress PROT 96.49
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 96.45
3tnj_A150 Universal stress protein (USP); structural genomic 96.44
1q77_A138 Hypothetical protein AQ_178; structural genomics, 96.4
3fdx_A143 Putative filament protein / universal stress PROT; 96.35
2z08_A137 Universal stress protein family; uncharacterized c 96.12
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 95.95
3loq_A294 Universal stress protein; structural genomics, PSI 95.83
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 95.62
3fg9_A156 Protein of universal stress protein USPA family; A 95.56
3mt0_A290 Uncharacterized protein PA1789; structural genomic 95.06
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 94.75
1q77_A138 Hypothetical protein AQ_178; structural genomics, 94.63
3olq_A319 Universal stress protein E; structural genomics, P 94.49
3cis_A 309 Uncharacterized protein; alpha/beta hydrolase, ATP 94.13
3ab8_A 268 Putative uncharacterized protein TTHA0350; tandem- 94.12
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 91.37
3zux_A332 Transporter, ASBTNM; transport protein, membrane p 80.58
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
Probab=99.89  E-value=1e-23  Score=226.79  Aligned_cols=298  Identities=15%  Similarity=0.200  Sum_probs=208.8

Q ss_pred             HHHHHHHHHHHHHhhccChhHH----Hhchh--HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCchHHHHHHHHHHhc
Q 043087           83 FAFISRILFMFLIGLEMDTAYL----RTNMD--LAATIASGGLLVSFVFGIILTYISRFVLDIKDNTPAFSITITILLAN  156 (754)
Q Consensus        83 l~~igli~llF~~Gle~d~~~l----~~~~k--~~~~i~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~i~~~ls~  156 (754)
                      +-.-.+.++||.+|+|+|.+.+    ++.+|  .....++.|+++|++++.     .++.    .  .........+.+.
T Consensus        63 indglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~iy~-----~~~~----~--~~~~~~gw~ip~A  131 (388)
T 1zcd_A           63 INDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYL-----AFNY----A--DPITREGWAIPAA  131 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHG-----GGCC----S--STTHHHHTSSSSC
T ss_pred             HhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHH-----HHhc----C--ChhhhhhhHHHHH
Confidence            5556667899999999999877    55444  367789999999988732     2232    1  1113445556777


Q ss_pred             ccHHHHHHHHHhcCc-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 043087          157 SASPVVMRLIDELKF-NTSELGRLASTTSLINEVGCIIYYSSFVTVLSSKNFANAIYSIILTALLIIINMYLAKWFARWN  235 (754)
Q Consensus       157 Ts~~vv~~lL~e~~~-l~s~~g~l~ls~a~~~Di~~i~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~l~~~~  235 (754)
                      |+.+....++..++. .++..++.+++.+++||+.+|++++++.+  .+.+.........     .++..    +..+|.
T Consensus       132 TdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt--~~~~~~~l~~~~~-----~~~~~----~~l~r~  200 (388)
T 1zcd_A          132 TDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT--NDLSMASLGVAAV-----AIAVL----AVLNLC  200 (388)
T ss_dssp             CCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC--CCCCHHHHHHHHH-----HHHHH----HHHHHT
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc--CCccHHHHHHHHH-----HHHHH----HHHHHh
Confidence            999899999999765 55667799999999999999999988853  1112111111111     11111    222222


Q ss_pred             cCCCccchhHHHHHHHHHHHHHHHHHHhCchHhHHHHHHHhhccCCC----CchHHHHHHHHHHHHHHHHHHH-HHHhhc
Q 043087          236 KDSKYVSNAQVLFLLVLVVSLAFSIEVLGYNSTITGFLLGVFFPRDG----KTTRTLFKKLAYSIHNFVLPIY-FGYMGF  310 (754)
Q Consensus       236 ~~~~~~~~~~~~~vl~~~l~~~~~a~~~G~s~~lGaflaGl~i~~~~----~~~~~~~ek~~~~~~~~f~plF-F~~~G~  310 (754)
                      ..    +....+.++ . +.+.+.++..|+|+++|+|++|+++|+.+    +..++..++++.+...+++|+| |+..|.
T Consensus       201 ~v----~~~~~y~~l-g-l~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l~p~v~~~ilPlFaFanaGv  274 (388)
T 1zcd_A          201 GA----RRTGVYILV-G-VVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGV  274 (388)
T ss_dssp             TC----CCTHHHHHH-H-HHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHHHHHHHHTHHHHHHHHHCCC
T ss_pred             cc----hhHHHHHHH-H-HHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCe
Confidence            21    223233333 2 24456779999999999999999999642    3356777888888888999999 999999


Q ss_pred             ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHH----HHHhhc------CCChHHHHHHHHHhhhhhhHHHHHHHHhhhc
Q 043087          311 QFDIRDLLKHYQNILLVLLLLFSCIASRMIGTL----FVCHRL------KIPRIKAVLLAFVLNLKGNFELILIDVEAGR  380 (754)
Q Consensus       311 ~~dl~~l~~~~~~~~~~~~~~~~~~~~K~~~~~----l~~~~~------~~~~~~~~~lg~~l~~kG~~~l~l~~~~~~~  380 (754)
                      ++|....... .. .....+++..+++|+++++    +..|+.      |++++|...+|++++.++++++++++++++ 
T Consensus       275 ~l~~~~~~~l-~~-~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~gigftmsL~Ia~laf~-  351 (388)
T 1zcd_A          275 SLQGVTLDGL-TS-ILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFIASLAFG-  351 (388)
T ss_dssp             CCSSSCCCTH-HH-HSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTTCCHHHHHHHHHHHST-
T ss_pred             eecccchhhc-cC-hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhccchHHHHHHHHHhcc-
Confidence            9998532211 11 1223455667899998844    444444      999999999999999999999999999998 


Q ss_pred             ccc--ccchhhHHHHHHHHHHHHHhHHHHHHHHh
Q 043087          381 SAT--WWSPMIHRMLLIVVVLNTLITGPIIASIL  412 (754)
Q Consensus       381 ~~i--i~~~~~~~~lv~~~vls~~i~~pl~~~l~  412 (754)
                      .+.  + .++.+..+++++++++++++.++++.+
T Consensus       352 ~~~~~~-~~~ak~~il~~s~~s~i~g~~~L~~~~  384 (388)
T 1zcd_A          352 SVDPEL-INWAKLGILVGSISSAVIGYSWLRVRL  384 (388)
T ss_dssp             TSSCSS-HHHHHHHHHHHHHTTTSTTTGGGTTTC
T ss_pred             CCchhh-HhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            765  4 466788888999999888877776543
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query754
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 97.85
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 97.81
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 97.5
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 97.34
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 96.92
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 96.67
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 96.62
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 96.29
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 96.05
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 95.65
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 95.53
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 81.83
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: "Hypothetical" protein MJ0577
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.85  E-value=1.2e-05  Score=73.63  Aligned_cols=140  Identities=16%  Similarity=0.176  Sum_probs=80.5

Q ss_pred             eEEEEeecCCCcccchhh--hcccCCCCcceeeeeeccccccchhhhhhhhccCC--CCCCCC--c------ccCCCchh
Q 043087          436 RILSCAYEPRHASGQLVL--SASFGSSISPYLMHLVELPKRRRKAKLLYNQLEDG--GQYSDE--E------DYGGNDVL  503 (754)
Q Consensus       436 rIlic~~~~~~~~~~i~l--~~~~~~p~~v~~l~lVel~~r~~~~~~~~~~~~~~--~~~~~~--~------~~~~~~il  503 (754)
                      |||+++-+.+.....+..  +..+.....++.+|.++.... .............  ......  .      ....++.+
T Consensus         5 ~ILvavD~s~~s~~al~~a~~la~~~~a~l~llhV~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (160)
T d1mjha_           5 KILYPTDFSETAEIALKHVKAFKTLKAEEVILLHVIDEREI-KKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNKM   83 (160)
T ss_dssp             EEEEECCSCHHHHHHHHHHHHTCCSSCCEEEEEEEEEGGGT-C-----------------CHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCHHHHHHHHHHHHHHHhcCCEEEEEEecccccc-cccccccccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence            788888665554445554  444555667888888766543 1111111000000  000000  0      00011111


Q ss_pred             hHhHHHHhhhccCceeEEEeEEeeCCCchHHHHHHHHhccCccEEEecCCCCCcccccccccchhhhHHHHHHhccCCCc
Q 043087          504 EINEAVDSFTAQTRIRISQVKIVNTFANMYEDVCNAAEDFRVTIIFLPFHKHQRIDQRLENSKEGYRTTNQKILRHAPCS  583 (754)
Q Consensus       504 ~i~~a~~~~~~~~~V~v~~~~~vs~~~~m~edI~~~A~e~~a~LIilpfhk~~~~dg~~~~~~~~~r~~n~~Vl~~apCs  583 (754)
                         +.+..-....++.++......   +..+.||+.|++.++|+|++|.|++....+.+.      +++.++|++++|||
T Consensus        84 ---~~~~~~~~~~gv~~~~~~~~G---~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~------GS~a~~vl~~s~~p  151 (160)
T d1mjha_          84 ---ENIKKELEDVGFKVKDIIVVG---IPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILL------GSVTENVIKKSNKP  151 (160)
T ss_dssp             ---HHHHHHHHHTTCEEEEEEEEE---CHHHHHHHHHHHTTCSEEEEESCCSSCCTTCSS------CHHHHHHHHHCCSC
T ss_pred             ---HHHHHHHHhcCCeEEEEEEec---cHHHHHhhhhhccccceEEeccCCCCccccccc------CcHHHHHHhcCCCC
Confidence               222222334567777666554   567999999999999999999998776655443      44789999999999


Q ss_pred             eEEEe
Q 043087          584 VGVLV  588 (754)
Q Consensus       584 VgIlv  588 (754)
                      |-|+-
T Consensus       152 VlvV~  156 (160)
T d1mjha_         152 VLVVK  156 (160)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            88763
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure