Citrus Sinensis ID: 043128

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-
VSLSYIVIPILVAAFHCQLNQLRSPCIQRVKELPDEVSSEIKSLRVKSNQECEANIAEVDPMHATRVRGIHEALDSYDFELLKLLLDESNVTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVSFARCLFPSEAIIAMDIADADATNFCTGLSASKSKGSSGNLKEVDLNETPSMQAKRLAFTELSMIAVETGRRYFPHSSKVIEEFMNCDWSDASLLEFGTPEAQKLKRACFHVRKAFCQDMASDNRSGPSSSSSAFFVP
cccccHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccHHHHHHHHccccccccccHHHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHHHccccHHHHHHHHcccccccccccccccHHHHHHHHccHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc
ccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHHHccHHHHcccccccccccccHHHHHHHHccccHHHHHHHHHccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHccccccccccccHHHHHHHHHHHcccccccccccHHHcHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccccccccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHcccccHHHHHHHHHHHHHHHHHHHcHHHHcccccccccccEEcc
VSLSYIVIPILVAAFHCQlnqlrspciqrvkelpdevSSEIKSLRVKSNQeceaniaevdpmhatrVRGIHEALDSYDFELLKLLLDESNVTLDDAYALHYAAAYCSPKVFKEVLNMDsaglnlkdarghTVLHVAARRKEPAVLVTLLskggcasettsdGQTAVAICRRMTRRKDYIEATKQgqetnkdrLCIDVLEREMRRnsmsgnlalssevmaDDFQMKLNYLENRVSFARCLFPSEAIIAMdiadadatnfctglsaskskgssgnlkevdlnetpsmQAKRLAFTELSMIAVETgrryfphssKVIEEFmncdwsdasllefgtpeaQKLKRACFHVRKAFCqdmasdnrsgpsssssaffvp
VSLSYIVIPILVAAFHCQLNQLRSPCIQRVKELPDEVSSEIKSLRVKSNQECEaniaevdpmhaTRVRGIHEALDSYDFELLKLLLDESNVTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLskggcasettsdgqtaVAICRRMTRRKDYIeatkqgqetnkdrlcIDVLEREMRRnsmsgnlalsseVMADDFQMKLNYLENRVSFARCLFPSEAIIAMDIADADATNFCTGLsaskskgssgnlkevdlnetpsmqAKRLAFTELSMIAVETGRRYFPHSSKVIEEFMNCDWSDASLLEFGTPEAQKLKRACFHVRKAFCQDMasdnrsgpsssssaffvp
VSLSYIVIPILVAAFHCQLNQLRSPCIQRVKELPDEVSSEIKSLRVKSNQECEANIAEVDPMHATRVRGIHEALDSYDFELLKLLLDESNVTlddayalhyaaayCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVSFARCLFPSEaiiamdiadadaTNFCTglsaskskgssgnlkEVDLNETPSMQAKRLAFTELSMIAVETGRRYFPHSSKVIEEFMNCDWSDASLLEFGTPEAQKLKRACFHVRKAFCQDMAsdnrsgpsssssAFFVP
**LSYIVIPILVAAFHCQLNQLRSPCIQRVK**********************ANIAEVDPMHATRVRGIHEALDSYDFELLKLLLDESNVTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETT*DGQTAVAICRRMTRRKDYI************RLCIDVL*****************EVMADDFQMKLNYLENRVSFARCLFPSEAIIAMDIADADATNFCTGL***************************LAFTELSMIAVETGRRYFPHSSKVIEEFMNCDWSDASLLEFGTPEAQKLKRACFHVRKAFCQ********************
VSLSYIVIPILVAAFHCQLNQLRSPCIQRVKELPDEVSSEIKSLRVKSNQECEANIAEVDPMHATRVRGIHEALDSYDFELLKLLLDESNVTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVSFARCLFPSEAIIAMDIADADATNFCT*****************DLNETPSMQAKRLAFTELSMIAVETGRRYFPHSSKVIEEFMNCDWSDAS****************FHVRKAFCQ***************AFFVP
VSLSYIVIPILVAAFHCQLNQLRSPCIQRVKELPDEVSSEIKSLRVKSNQECEANIAEVDPMHATRVRGIHEALDSYDFELLKLLLDESNVTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVSFARCLFPSEAIIAMDIADADATNFCTGLSA**********KEVDLNETPSMQAKRLAFTELSMIAVETGRRYFPHSSKVIEEFMNCDWSDASLLEFGTPEAQKLKRACFHVRKAFCQDMA*****************
VSLSYIVIPILVAAFHCQLNQLRSPCIQRVKELPDEVSSEIKSLRVKSNQECEANIAEVDPMHATRVRGIHEALDSYDFELLKLLLDESNVTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVSFARCLFPSEAIIAMDIADADATNFCTGLSASK***SSGNLKEVDLNETPSMQAKRLAFTELSMIAVETGRRYFPHSSKVIEEFMNCDWSDASLLEFGTPEAQKLKRACFHVRKAFCQDMA*****************
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VSLSYIVIPILVAAFHCQLNQLRSPCIQRVKELPDEVSSEIKSLRVKSNQECEANIAEVDPMHATRVRGIHEALDSYDFELLKLLLDESNVTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVSFARCLFPSEAIIAMDIADADATNFCTGLSASKSKGSSGNLKEVDLNETPSMQAKRLAFTELSMIAVETGRRYFPHSSKVIEEFMNCDWSDASLLEFGTPEAQKLKRACFHVRKAFCQDMASDNRSGPSSSSSAFFVP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query371 2.2.26 [Sep-21-2011]
Q5ICL9574 Regulatory protein NPR4 O yes no 0.929 0.601 0.467 1e-82
Q8L746586 Regulatory protein NPR3 O no no 0.935 0.592 0.448 1e-81
P93002593 Regulatory protein NPR1 O no no 0.843 0.527 0.369 4e-47
Q9SZI3600 Regulatory protein NPR2 O no no 0.881 0.545 0.359 4e-45
Q9ZVC2491 Regulatory protein NPR5 O no no 0.509 0.384 0.296 3e-14
Q9M1I7467 Regulatory protein NPR6 O no no 0.514 0.408 0.293 5e-14
Q25338 1214 Delta-latroinsectotoxin-L N/A no 0.277 0.084 0.293 0.0006
P0CQ68363 Arginine N-methyltransfer yes no 0.245 0.250 0.333 0.0007
P0CQ69363 Arginine N-methyltransfer N/A no 0.245 0.250 0.333 0.0007
>sp|Q5ICL9|NPR4_ARATH Regulatory protein NPR4 OS=Arabidopsis thaliana GN=NPR4 PE=1 SV=1 Back     alignment and function desciption
 Score =  306 bits (785), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 175/374 (46%), Positives = 240/374 (64%), Gaps = 29/374 (7%)

Query: 2   SLSYIVIPILVAAFHCQLNQLRSPCIQRV-----------KELPDEVSSEIKSLRVKSNQ 50
           SL   V+PIL+ AFHC L QL   CI+RV           KELP EV  +IK LRVKS  
Sbjct: 183 SLVENVLPILLVAFHCDLTQLLDQCIERVARSDLDRFCIEKELPLEVLEKIKQLRVKS-- 240

Query: 51  ECEANIAEVDPMHATRVRGIHEALDSYDFELLKLLLDESNVTLDDAYALHYAAAYCSPKV 110
               NI EV+     R   + +ALDS D EL+KLLL ES++TLD A  LHYA AY  PKV
Sbjct: 241 ---VNIPEVEDKSIERTGKVLKALDSDDVELVKLLLTESDITLDQANGLHYAVAYSDPKV 297

Query: 111 FKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICR 170
             +VL++D A +N +++RG+TVLH+AA R+EP +++ L+ KG  AS+ T DG++AV ICR
Sbjct: 298 VTQVLDLDMADVNFRNSRGYTVLHIAAMRREPTIIIPLIQKGANASDFTFDGRSAVNICR 357

Query: 171 RMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSM-SGNLALSSEVMADDFQMKLNYL 229
           R+TR KDY   T + +E +K RLCID+LERE+RRN + SG+    S  M +D QM+L YL
Sbjct: 358 RLTRPKDYHTKTSR-KEPSKYRLCIDILEREIRRNPLVSGDTPTCSHSMPEDLQMRLLYL 416

Query: 230 ENRVSFARCLFPSEAIIAMDIADADATNFCTG-LSASKSKGSSGNLKEVDLNETPSMQAK 288
           E RV  A+  FP+EA +AMD+A+ + T+ CTG L+   S  ++ NL +VDLNETP +Q K
Sbjct: 417 EKRVGLAQLFFPAEANVAMDVANVEGTSECTGLLTPPPSNDTTENLGKVDLNETPYVQTK 476

Query: 289 R-LAFTELSMIAVETGRRYFPHSSKVI----EEFMNCDWSDASLLEFGTPEAQKLKRACF 343
           R L   +  M  VETGRRYFP   +V+    +++M+ +  D S  E GT + ++ KR  +
Sbjct: 477 RMLTRMKALMKTVETGRRYFPSCYEVLDKYMDQYMDEEIPDMSYPEKGTVKERRQKRMRY 536

Query: 344 H-----VRKAFCQD 352
           +     V+KA+ +D
Sbjct: 537 NELKNDVKKAYSKD 550
May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Involved in the regulation of basal defense responses against pathogens, and may be implicated in the cross-talk between the SA- and JA-dependent signaling pathways.
Arabidopsis thaliana (taxid: 3702)
>sp|Q8L746|NPR3_ARATH Regulatory protein NPR3 OS=Arabidopsis thaliana GN=NPR3 PE=1 SV=1 Back     alignment and function description
>sp|P93002|NPR1_ARATH Regulatory protein NPR1 OS=Arabidopsis thaliana GN=NPR1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SZI3|NPR2_ARATH Regulatory protein NPR2 OS=Arabidopsis thaliana GN=NPR2 PE=3 SV=1 Back     alignment and function description
>sp|Q9ZVC2|NPR5_ARATH Regulatory protein NPR5 OS=Arabidopsis thaliana GN=NPR5 PE=1 SV=1 Back     alignment and function description
>sp|Q9M1I7|NPR6_ARATH Regulatory protein NPR6 OS=Arabidopsis thaliana GN=NPR6 PE=1 SV=1 Back     alignment and function description
>sp|Q25338|LITD_LATTR Delta-latroinsectotoxin-Lt1a OS=Latrodectus tredecimguttatus PE=1 SV=1 Back     alignment and function description
>sp|P0CQ68|RMT2_CRYNJ Arginine N-methyltransferase 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=RMT2 PE=3 SV=1 Back     alignment and function description
>sp|P0CQ69|RMT2_CRYNB Arginine N-methyltransferase 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=RMT2 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query371
224062625 597 NPR1/NIM1-like regulatory protein [Popul 0.954 0.592 0.602 1e-119
351726319 590 NPR1-1 protein [Glycine max] gi|21326848 0.938 0.589 0.578 1e-110
351726790 590 NPR1-2 protein [Glycine max] gi|21326851 0.938 0.589 0.569 1e-109
449525948 585 PREDICTED: regulatory protein NPR3-like 0.932 0.591 0.569 1e-108
449460026 585 PREDICTED: regulatory protein NPR3-like 0.932 0.591 0.564 1e-108
255559053 590 Regulatory protein NPR1, putative [Ricin 0.948 0.596 0.554 1e-107
397134444 512 non-expressor of PR1-like protein, parti 0.946 0.685 0.556 1e-107
224136524 589 NPR1/NIM1-like regulatory protein [Popul 0.948 0.597 0.552 1e-107
332656172 587 regulatory protein NPR2 [Populus deltoid 0.948 0.599 0.557 1e-106
357448377 589 NPR1-1 protein [Medicago truncatula] gi| 0.932 0.587 0.561 1e-105
>gi|224062625|ref|XP_002300863.1| NPR1/NIM1-like regulatory protein [Populus trichocarpa] gi|222842589|gb|EEE80136.1| NPR1/NIM1-like regulatory protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/377 (60%), Positives = 287/377 (76%), Gaps = 23/377 (6%)

Query: 7   VIPILVAAFHCQLNQLRSPCIQRV-----------KELPDEVSSEIKSLRVKSNQECEAN 55
           VIPIL+AAFH QL+QL S CI+R+           KELPDE+SS+IK LR KS  E E++
Sbjct: 198 VIPILMAAFHYQLDQLLSHCIERLVRSDLDSTCIDKELPDEISSKIKLLRKKSLPEAESS 257

Query: 56  IAEVDPMHATRVRGIHEALDSYDFELLKLLLDESNVTLDDAYALHYAAAYCSPKVFKEVL 115
           + EVDP+     R IH+ALDS D EL++LLL ESN+TLDDAYALHYA AYC PK+ KEVL
Sbjct: 258 VEEVDPILEKSFRRIHKALDSDDVELVELLLSESNLTLDDAYALHYAVAYCDPKIVKEVL 317

Query: 116 NMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRR 175
           ++ SA LNL+++RG++VLHVAARRKEP++++ LL++G  ASETT DGQ AVAICRR+TR 
Sbjct: 318 SLGSADLNLRNSRGYSVLHVAARRKEPSIIMALLTRGASASETTLDGQNAVAICRRLTRP 377

Query: 176 KDYIEATKQGQETNKDRLCIDVLEREM-RRNSMSGNLALSSEVMADDFQMKLNYLENRVS 234
           KDY E TKQGQE+NKDR+CIDVLE +M RRNSMS N++  S  +ADD  MKL+YLENRV+
Sbjct: 378 KDYNENTKQGQESNKDRICIDVLETDMRRRNSMSANVSTLSPSVADDLSMKLDYLENRVA 437

Query: 235 FARCLFPSEAIIAMDIADADATNFCTGLSASKSKGSSGNLKEVDLNETPSMQAKRL---- 290
           FAR LFP+EA +AMD A+A++T+  TGL ASKSKGSSG+L+EVDLNETP++QAKRL    
Sbjct: 438 FARLLFPAEARLAMDSANANSTSMYTGLLASKSKGSSGDLREVDLNETPTVQAKRLQSRL 497

Query: 291 -AFTELSMI-AVETGRRYFPHSSKVIEEFMNCDWSDASLLEFGTPEAQKLKRACF----- 343
            A  +   I  +ETGR YFPH SKV+++F++ D  DA  L+ GTPE QK K+  F     
Sbjct: 498 QALHKTGTIYCMETGRHYFPHCSKVVDKFLDDDMPDALFLDKGTPEEQKTKKMRFTELKD 557

Query: 344 HVRKAFCQDMASDNRSG 360
            V+KAF +DM ++NRS 
Sbjct: 558 DVQKAFYKDMENNNRSA 574

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|351726319|ref|NP_001238658.1| NPR1-1 protein [Glycine max] gi|213268485|gb|ACJ45013.1| NPR1-1 protein [Glycine max] Back     alignment and taxonomy information
>gi|351726790|ref|NP_001238674.1| NPR1-2 protein [Glycine max] gi|213268511|gb|ACJ45015.1| NPR1-2 protein [Glycine max] Back     alignment and taxonomy information
>gi|449525948|ref|XP_004169978.1| PREDICTED: regulatory protein NPR3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449460026|ref|XP_004147747.1| PREDICTED: regulatory protein NPR3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255559053|ref|XP_002520549.1| Regulatory protein NPR1, putative [Ricinus communis] gi|223540263|gb|EEF41835.1| Regulatory protein NPR1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|397134444|gb|AFO10948.1| non-expressor of PR1-like protein, partial [Gossypium barbadense] Back     alignment and taxonomy information
>gi|224136524|ref|XP_002322351.1| NPR1/NIM1-like regulatory protein [Populus trichocarpa] gi|222869347|gb|EEF06478.1| NPR1/NIM1-like regulatory protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|332656172|gb|AEE81755.1| regulatory protein NPR2 [Populus deltoides] Back     alignment and taxonomy information
>gi|357448377|ref|XP_003594464.1| NPR1-1 protein [Medicago truncatula] gi|355483512|gb|AES64715.1| NPR1-1 protein [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query371
TAIR|locus:2133925574 NPR4 "NPR1-like protein 4" [Ar 0.927 0.599 0.416 4.3e-61
TAIR|locus:2153192586 NPR3 "AT5G45110" [Arabidopsis 0.924 0.585 0.394 3.5e-59
TAIR|locus:2120800600 AT4G26120 "AT4G26120" [Arabido 0.808 0.5 0.338 6.8e-37
TAIR|locus:2014200593 NPR1 "AT1G64280" [Arabidopsis 0.843 0.527 0.321 1.9e-35
TAIR|locus:2080595467 BOP1 "BLADE ON PETIOLE 1" [Ara 0.509 0.404 0.277 1.7e-09
TAIR|locus:2040292491 BOP2 "BLADE ON PETIOLE2" [Arab 0.444 0.336 0.277 7.2e-08
TAIR|locus:2133925 NPR4 "NPR1-like protein 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
 Identities = 156/375 (41%), Positives = 215/375 (57%)

Query:     2 SLSYIVIPILVAAFHCQLNQLRSPCIQRV-----------KELPDEVSSEIKSLRVKSNQ 50
             SL   V+PIL+ AFHC L QL   CI+RV           KELP EV  +IK LRVKS  
Sbjct:   183 SLVENVLPILLVAFHCDLTQLLDQCIERVARSDLDRFCIEKELPLEVLEKIKQLRVKS-- 240

Query:    51 ECEANIAEVDPMHATRVRGIHEALDSYDFELLKLLLDESNVTXXXXXXXXXXXXXCSPKV 110
                 NI EV+     R   + +ALDS D EL+KLLL ES++T               PKV
Sbjct:   241 ---VNIPEVEDKSIERTGKVLKALDSDDVELVKLLLTESDITLDQANGLHYAVAYSDPKV 297

Query:   111 FKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICR 170
               +VL++D A +N +++RG+TVLH+AA R+EP +++ L+ KG  AS+ T DG++AV ICR
Sbjct:   298 VTQVLDLDMADVNFRNSRGYTVLHIAAMRREPTIIIPLIQKGANASDFTFDGRSAVNICR 357

Query:   171 RMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSM-SGNLALSSEVMADDFQMKLNYL 229
             R+TR KDY   T + +E +K RLCID+LERE+RRN + SG+    S  M +D QM+L YL
Sbjct:   358 RLTRPKDYHTKTSR-KEPSKYRLCIDILEREIRRNPLVSGDTPTCSHSMPEDLQMRLLYL 416

Query:   230 ENRVSFARCLFPSEXXXXXXXXXXXXTNFCTXXXXXX-XXXXXXXXXEVDLNETPSMQAK 288
             E RV  A+  FP+E            T+ CT                +VDLNETP +Q K
Sbjct:   417 EKRVGLAQLFFPAEANVAMDVANVEGTSECTGLLTPPPSNDTTENLGKVDLNETPYVQTK 476

Query:   289 RLAFTELS--MIAVETGRRYFPHSSKVIEEFMNC----DWSDASLLEFGTPEAQKLKRAC 342
             R+  T +   M  VETGRRYFP   +V++++M+     +  D S  E GT + ++ KR  
Sbjct:   477 RM-LTRMKALMKTVETGRRYFPSCYEVLDKYMDQYMDEEIPDMSYPEKGTVKERRQKRMR 535

Query:   343 FH-----VRKAFCQD 352
             ++     V+KA+ +D
Sbjct:   536 YNELKNDVKKAYSKD 550
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0005515 "protein binding" evidence=IPI
GO:0009617 "response to bacterium" evidence=IEP;RCA;IMP
GO:0009620 "response to fungus" evidence=IMP
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0050832 "defense response to fungus" evidence=IMP
GO:2000022 "regulation of jasmonic acid mediated signaling pathway" evidence=IMP
GO:2000031 "regulation of salicylic acid mediated signaling pathway" evidence=IMP
GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IMP
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IMP
GO:0009410 "response to xenobiotic stimulus" evidence=RCA
GO:0009627 "systemic acquired resistance" evidence=IGI;RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0031347 "regulation of defense response" evidence=RCA
GO:0080185 "effector dependent induction by symbiont of host immune response" evidence=IGI
GO:1901149 "salicylic acid binding" evidence=IDA
TAIR|locus:2153192 NPR3 "AT5G45110" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120800 AT4G26120 "AT4G26120" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014200 NPR1 "AT1G64280" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080595 BOP1 "BLADE ON PETIOLE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040292 BOP2 "BLADE ON PETIOLE2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query371
pfam12313203 pfam12313, NPR1_like_C, NPR1/NIM1 like defence pro 2e-83
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 4e-12
pfam1279691 pfam12796, Ank_2, Ankyrin repeats (3 copies) 8e-10
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 7e-09
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 3e-08
pfam1190048 pfam11900, DUF3420, Domain of unknown function (DU 3e-07
PHA03100422 PHA03100, PHA03100, ankyrin repeat protein; Provis 6e-05
PHA03095471 PHA03095, PHA03095, ankyrin-like protein; Provisio 6e-04
pfam1279691 pfam12796, Ank_2, Ankyrin repeats (3 copies) 8e-04
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 0.001
pfam1385756 pfam13857, Ank_5, Ankyrin repeats (many copies) 0.004
>gnl|CDD|204877 pfam12313, NPR1_like_C, NPR1/NIM1 like defence protein C terminal Back     alignment and domain information 
 Score =  251 bits (644), Expect = 2e-83
 Identities = 112/204 (54%), Positives = 144/204 (70%), Gaps = 8/204 (3%)

Query: 170 RRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYL 229
           +R+TR KDY   T+QG+E+NKDRLCI++LE+EMRRN M G+ ++SS + ADD +M+L YL
Sbjct: 1   KRLTRPKDYNTKTEQGKESNKDRLCIEILEQEMRRNPMPGDASVSSALAADDLRMRLLYL 60

Query: 230 ENRVSFARCLFPSEAIIAMDIADADATNFCTGLSASKSKGSSGNLKEVDLNETPSMQAKR 289
           ENRV+ AR LFP+EA +AMDIA AD T+  TGLSA  SKGS GNL EVDLNETP +Q +R
Sbjct: 61  ENRVALARLLFPAEAKLAMDIAQADGTSEFTGLSA--SKGSGGNLTEVDLNETPFVQKER 118

Query: 290 L-AFTELSMIAVETGRRYFPHSSKVIEEFMNCDWSDASLLEFGTPEAQKLKRACFH---- 344
             +  +     VE GRR+FP  S+V+++ M+ D  D + LE GTPE QK KR  F     
Sbjct: 119 HLSRLKALSKTVELGRRFFPRCSEVLDKIMDDDLPDLAYLEKGTPEEQKQKRMRFMELKE 178

Query: 345 -VRKAFCQDMASDNRSGPSSSSSA 367
            V+KAF +D    NRS  SSSSS+
Sbjct: 179 DVQKAFSKDKEELNRSSLSSSSSS 202

This family of proteins is found in eukaryotes. Proteins in this family are typically between 251 and 588 amino acids in length. The family is found in association with pfam00023, pfam00651. There are two conserved sequence motifs: LENRV and DLN. NPR1 (NIM1) is a defence protein in many plant species. Length = 203
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|192869 pfam11900, DUF3420, Domain of unknown function (DUF3420) Back     alignment and domain information
>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional Back     alignment and domain information
>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional Back     alignment and domain information
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 371
PF12313207 NPR1_like_C: NPR1/NIM1 like defence protein C term 100.0
KOG4412226 consensus 26S proteasome regulatory complex, subun 99.93
PHA02791284 ankyrin-like protein; Provisional 99.9
KOG4412226 consensus 26S proteasome regulatory complex, subun 99.89
KOG0509 600 consensus Ankyrin repeat and DHHC-type Zn-finger d 99.89
PHA02791284 ankyrin-like protein; Provisional 99.86
PHA02946446 ankyin-like protein; Provisional 99.85
PHA02875413 ankyrin repeat protein; Provisional 99.84
PHA02874434 ankyrin repeat protein; Provisional 99.84
PHA03095471 ankyrin-like protein; Provisional 99.84
PHA02878477 ankyrin repeat protein; Provisional 99.83
PHA02859209 ankyrin repeat protein; Provisional 99.83
PHA02878477 ankyrin repeat protein; Provisional 99.83
PHA02874434 ankyrin repeat protein; Provisional 99.83
PHA02741169 hypothetical protein; Provisional 99.83
PHA02875413 ankyrin repeat protein; Provisional 99.82
PHA02876 682 ankyrin repeat protein; Provisional 99.82
PHA03100480 ankyrin repeat protein; Provisional 99.82
PHA02859209 ankyrin repeat protein; Provisional 99.82
PHA02946446 ankyin-like protein; Provisional 99.81
PHA02743166 Viral ankyrin protein; Provisional 99.81
KOG0509 600 consensus Ankyrin repeat and DHHC-type Zn-finger d 99.81
PHA03100480 ankyrin repeat protein; Provisional 99.81
KOG0510 929 consensus Ankyrin repeat protein [General function 99.81
PHA02736154 Viral ankyrin protein; Provisional 99.8
PHA02716 764 CPXV016; CPX019; EVM010; Provisional 99.8
PHA02884300 ankyrin repeat protein; Provisional 99.79
KOG0508 615 consensus Ankyrin repeat protein [General function 99.78
PHA02716 764 CPXV016; CPX019; EVM010; Provisional 99.77
PHA02876682 ankyrin repeat protein; Provisional 99.77
KOG0195 448 consensus Integrin-linked kinase [Signal transduct 99.77
PHA03095471 ankyrin-like protein; Provisional 99.76
PHA02989494 ankyrin repeat protein; Provisional 99.76
PHA02795437 ankyrin-like protein; Provisional 99.75
PF1279689 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 99.75
PHA02989 494 ankyrin repeat protein; Provisional 99.75
PHA02798489 ankyrin-like protein; Provisional 99.75
PLN03192823 Voltage-dependent potassium channel; Provisional 99.74
PHA02795437 ankyrin-like protein; Provisional 99.74
KOG0512228 consensus Fetal globin-inducing factor (contains a 99.73
KOG0514452 consensus Ankyrin repeat protein [General function 99.73
PHA02798489 ankyrin-like protein; Provisional 99.73
KOG0508 615 consensus Ankyrin repeat protein [General function 99.72
KOG4177 1143 consensus Ankyrin [Cell wall/membrane/envelope bio 99.72
PHA02743166 Viral ankyrin protein; Provisional 99.72
KOG0510 929 consensus Ankyrin repeat protein [General function 99.72
KOG0502296 consensus Integral membrane ankyrin-repeat protein 99.71
PHA02917 661 ankyrin-like protein; Provisional 99.71
KOG0512228 consensus Fetal globin-inducing factor (contains a 99.7
PHA02917 661 ankyrin-like protein; Provisional 99.67
PLN03192823 Voltage-dependent potassium channel; Provisional 99.67
KOG4177 1143 consensus Ankyrin [Cell wall/membrane/envelope bio 99.66
cd00204126 ANK ankyrin repeats; ankyrin repeats mediate prote 99.65
PHA02730672 ankyrin-like protein; Provisional 99.64
PHA02736154 Viral ankyrin protein; Provisional 99.63
PHA02741169 hypothetical protein; Provisional 99.62
KOG0502296 consensus Integral membrane ankyrin-repeat protein 99.6
KOG0505527 consensus Myosin phosphatase, regulatory subunit [ 99.6
KOG4214117 consensus Myotrophin and similar proteins [Transcr 99.59
TIGR00870 743 trp transient-receptor-potential calcium channel p 99.58
KOG0195 448 consensus Integrin-linked kinase [Signal transduct 99.57
PF1279689 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 99.56
PHA02792631 ankyrin-like protein; Provisional 99.54
TIGR00870 743 trp transient-receptor-potential calcium channel p 99.54
PHA02730 672 ankyrin-like protein; Provisional 99.53
PHA02884300 ankyrin repeat protein; Provisional 99.52
COG0666235 Arp FOG: Ankyrin repeat [General function predicti 99.51
KOG3676 782 consensus Ca2+-permeable cation channel OSM-9 and 99.5
PF1385756 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 99.49
KOG0507 854 consensus CASK-interacting adaptor protein (caskin 99.47
PHA02792 631 ankyrin-like protein; Provisional 99.45
KOG0505527 consensus Myosin phosphatase, regulatory subunit [ 99.43
PTZ00322 664 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas 99.37
KOG1710396 consensus MYND Zn-finger and ankyrin repeat protei 99.37
KOG3676 782 consensus Ca2+-permeable cation channel OSM-9 and 99.34
PF1363754 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 99.33
KOG0515752 consensus p53-interacting protein 53BP/ASPP, conta 99.31
KOG0507 854 consensus CASK-interacting adaptor protein (caskin 99.27
KOG4214117 consensus Myotrophin and similar proteins [Transcr 99.27
PTZ00322 664 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas 99.25
cd00204126 ANK ankyrin repeats; ankyrin repeats mediate prote 99.24
KOG0514452 consensus Ankyrin repeat protein [General function 99.22
PF1363754 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 99.21
PF1385756 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 99.17
COG0666235 Arp FOG: Ankyrin repeat [General function predicti 99.11
KOG0515752 consensus p53-interacting protein 53BP/ASPP, conta 99.04
KOG1710396 consensus MYND Zn-finger and ankyrin repeat protei 98.92
KOG4369 2131 consensus RTK signaling protein MASK/UNC-44 [Signa 98.85
KOG4369 2131 consensus RTK signaling protein MASK/UNC-44 [Signa 98.79
PF1360630 Ank_3: Ankyrin repeat 98.76
PF0002333 Ank: Ankyrin repeat Hereditary spherocytosis; Inte 98.75
KOG0783 1267 consensus Uncharacterized conserved protein, conta 98.69
KOG0506622 consensus Glutaminase (contains ankyrin repeat) [A 98.68
KOG0818 669 consensus GTPase-activating proteins of the GIT fa 98.64
KOG0506622 consensus Glutaminase (contains ankyrin repeat) [A 98.59
KOG0818 669 consensus GTPase-activating proteins of the GIT fa 98.58
KOG0705749 consensus GTPase-activating protein Centaurin gamm 98.58
KOG0522 560 consensus Ankyrin repeat protein [General function 98.44
PF1360630 Ank_3: Ankyrin repeat 98.3
KOG0522 560 consensus Ankyrin repeat protein [General function 98.28
KOG0783 1267 consensus Uncharacterized conserved protein, conta 98.27
PF0002333 Ank: Ankyrin repeat Hereditary spherocytosis; Inte 98.27
KOG0705749 consensus GTPase-activating protein Centaurin gamm 98.26
KOG0520975 consensus Uncharacterized conserved protein, conta 98.21
KOG07821004 consensus Predicted diacylglycerol kinase [Signal 98.16
KOG07821004 consensus Predicted diacylglycerol kinase [Signal 98.14
KOG0521785 consensus Putative GTPase activating proteins (GAP 98.13
KOG2384223 consensus Major histocompatibility complex protein 97.87
KOG0511 516 consensus Ankyrin repeat protein [General function 97.85
KOG0521785 consensus Putative GTPase activating proteins (GAP 97.55
KOG3609 822 consensus Receptor-activated Ca2+-permeable cation 97.33
KOG0520 975 consensus Uncharacterized conserved protein, conta 97.31
KOG3609 822 consensus Receptor-activated Ca2+-permeable cation 97.06
smart0024830 ANK ankyrin repeats. Ankyrin repeats are about 33 97.03
KOG0511 516 consensus Ankyrin repeat protein [General function 96.78
KOG2505591 consensus Ankyrin repeat protein [General function 96.73
KOG2384223 consensus Major histocompatibility complex protein 96.42
PF1190049 DUF3420: Domain of unknown function (DUF3420); Int 96.37
smart0024830 ANK ankyrin repeats. Ankyrin repeats are about 33 96.18
KOG2505591 consensus Ankyrin repeat protein [General function 95.97
PF06128284 Shigella_OspC: Shigella flexneri OspC protein; Int 92.7
PF1192976 DUF3447: Domain of unknown function (DUF3447); Int 85.27
>PF12313 NPR1_like_C: NPR1/NIM1 like defence protein C terminal; InterPro: IPR021094 This entry represents the NPR1/NIM1 like defence protein, which is found in many plant species [] Back     alignment and domain information 
Probab=100.00  E-value=3.1e-67  Score=452.25  Aligned_cols=195  Identities=56%  Similarity=0.771  Sum_probs=187.9

Q ss_pred             CCCCcHhhHHhcCCChhhccCCHHHHHHHH-HhcccCCCccchhhhhhhhHHHHHhhhhchhhHHHhhCccccHHHhhhh
Q 043128          173 TRRKDYIEATKQGQETNKDRLCIDVLEREM-RRNSMSGNLALSSEVMADDFQMKLNYLENRVSFARCLFPSEAIIAMDIA  251 (371)
Q Consensus       173 ~~~~~v~~~~~~G~t~l~~~~~~~ile~~~-~~~p~~~~~~~~~~~~~~~l~~~ll~le~rv~~arll~~~e~~~~~~ia  251 (371)
                      .+..+++...+.|+..++.+.|++|+|+++ +++|+.+++++++++++|+++|+|+||||||++||+|||.||+++|+||
T Consensus         4 Tr~~Dy~~~te~gkes~KdrLCIeILEq~~~rr~p~~~eas~s~~~~~ddL~mrLLyLENRValARllFP~EAkvaMdIA   83 (207)
T PF12313_consen    4 TRAKDYNKKTEQGKESNKDRLCIEILEQEERRRNPMPGEASVSSPMAADDLHMRLLYLENRVALARLLFPMEAKVAMDIA   83 (207)
T ss_pred             CchhhhccchhhccccccCcchHHHHHHHHHhcCCCccccccccccchHhhhhhHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            456788899999999999999999999999 7999999999999999999999999999999999999999999999999


Q ss_pred             hhcCcccccccccccCCCCCCCCccccCCCChHHHHHhhHH-HHHHHHHHhhcccccCCchHHHHHhh-hCCCCcccccc
Q 043128          252 DADATNFCTGLSASKSKGSSGNLKEVDLNETPSMQAKRLAF-TELSMIAVETGRRYFPHSSKVIEEFM-NCDWSDASLLE  329 (371)
Q Consensus       252 ~~~~~~e~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~~~~~-~~~l~~~~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  329 (371)
                      +++||+||++.++++++.+++++++|||||+||+|+++|+. |.||+||||+|||||||||+|||||| +||++|+++++
T Consensus        84 ~~d~T~Eft~~s~~~~~~~~~~~~~vDLNetP~~~~~~l~~Rl~AL~KTVElGrRfFP~CSeVLdK~md~ddl~dl~~le  163 (207)
T PF12313_consen   84 QADGTSEFTGLSASPSKGSGGNRSEVDLNETPFKQNERLLSRLRALSKTVELGRRFFPRCSEVLDKIMDDDDLPDLAYLE  163 (207)
T ss_pred             ccCccccccccccccccCCccccCcCccccCcHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHhccCcchhhhhcc
Confidence            99999999999887788899999999999999999999999 99999999999999999999999999 56699999999


Q ss_pred             CCChHHHHhhhHhh-----HHHHhhhhhhhhccCCCCCCCCCC
Q 043128          330 FGTPEAQKLKRACF-----HVRKAFCQDMASDNRSGPSSSSSA  367 (371)
Q Consensus       330 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  367 (371)
                      +||||||++|||||     +|+|||+|||||+++|++||||||
T Consensus       164 ~~t~eeq~~Kr~Rf~ELke~v~kAFskDkeE~~~s~~ssSsSs  206 (207)
T PF12313_consen  164 KGTPEEQLVKRMRFMELKEDVQKAFSKDKEEFDRSSLSSSSSS  206 (207)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhcccccCcCCCC
Confidence            99999999999999     999999999999999999998887

The eukaryotic proteins are typically between 251 and 588 amino acids in length. NPR1/NIM1 like defence protein mediates the binding of TGA factors to the as-1 motif, found in the pathogenesis-related PR-1 gene which leads to the transcriptional regulation of the gene defence. Controls the onset of systemic acquired resistance (SAR) [].
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PHA02791 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] Back     alignment and domain information
>PHA02791 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02946 ankyin-like protein; Provisional Back     alignment and domain information
>PHA02875 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02874 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA03095 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02878 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02859 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02878 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02874 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02741 hypothetical protein; Provisional Back     alignment and domain information
>PHA02875 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02876 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA03100 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02859 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02946 ankyin-like protein; Provisional Back     alignment and domain information
>PHA02743 Viral ankyrin protein; Provisional Back     alignment and domain information
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] Back     alignment and domain information
>PHA03100 ankyrin repeat protein; Provisional Back     alignment and domain information
>KOG0510 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PHA02736 Viral ankyrin protein; Provisional Back     alignment and domain information
>PHA02716 CPXV016; CPX019; EVM010; Provisional Back     alignment and domain information
>PHA02884 ankyrin repeat protein; Provisional Back     alignment and domain information
>KOG0508 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PHA02716 CPXV016; CPX019; EVM010; Provisional Back     alignment and domain information
>PHA02876 ankyrin repeat protein; Provisional Back     alignment and domain information
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] Back     alignment and domain information
>PHA03095 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02989 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02795 ankyrin-like protein; Provisional Back     alignment and domain information
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain Back     alignment and domain information
>PHA02989 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02798 ankyrin-like protein; Provisional Back     alignment and domain information
>PLN03192 Voltage-dependent potassium channel; Provisional Back     alignment and domain information
>PHA02795 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] Back     alignment and domain information
>KOG0514 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PHA02798 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG0508 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PHA02743 Viral ankyrin protein; Provisional Back     alignment and domain information
>KOG0510 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] Back     alignment and domain information
>PHA02917 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] Back     alignment and domain information
>PHA02917 ankyrin-like protein; Provisional Back     alignment and domain information
>PLN03192 Voltage-dependent potassium channel; Provisional Back     alignment and domain information
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>PHA02730 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02736 Viral ankyrin protein; Provisional Back     alignment and domain information
>PHA02741 hypothetical protein; Provisional Back     alignment and domain information
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] Back     alignment and domain information
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>KOG4214 consensus Myotrophin and similar proteins [Transcription] Back     alignment and domain information
>TIGR00870 trp transient-receptor-potential calcium channel protein Back     alignment and domain information
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain Back     alignment and domain information
>PHA02792 ankyrin-like protein; Provisional Back     alignment and domain information
>TIGR00870 trp transient-receptor-potential calcium channel protein Back     alignment and domain information
>PHA02730 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02884 ankyrin repeat protein; Provisional Back     alignment and domain information
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only] Back     alignment and domain information
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A Back     alignment and domain information
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] Back     alignment and domain information
>PHA02792 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional Back     alignment and domain information
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A Back     alignment and domain information
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] Back     alignment and domain information
>KOG4214 consensus Myotrophin and similar proteins [Transcription] Back     alignment and domain information
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional Back     alignment and domain information
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>KOG0514 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A Back     alignment and domain information
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A Back     alignment and domain information
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only] Back     alignment and domain information
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] Back     alignment and domain information
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] Back     alignment and domain information
>PF13606 Ank_3: Ankyrin repeat Back     alignment and domain information
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] Back     alignment and domain information
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] Back     alignment and domain information
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0522 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PF13606 Ank_3: Ankyrin repeat Back     alignment and domain information
>KOG0522 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature Back     alignment and domain information
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] Back     alignment and domain information
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] Back     alignment and domain information
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] Back     alignment and domain information
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] Back     alignment and domain information
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>smart00248 ANK ankyrin repeats Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG2505 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] Back     alignment and domain information
>PF11900 DUF3420: Domain of unknown function (DUF3420); InterPro: IPR024228 This presumed domain is functionally uncharacterised Back     alignment and domain information
>smart00248 ANK ankyrin repeats Back     alignment and domain information
>KOG2505 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC Back     alignment and domain information
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query371
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-13
2rfa_A232 Transient receptor potential cation channel subfa 9e-09
2rfa_A232 Transient receptor potential cation channel subfa 6e-06
2rfa_A232 Transient receptor potential cation channel subfa 1e-04
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 6e-08
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 4e-05
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 6e-04
1bd8_A156 P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr 1e-07
1bd8_A156 P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr 2e-06
1sw6_A327 Regulatory protein SWI6; transcription regulation, 1e-07
1sw6_A327 Regulatory protein SWI6; transcription regulation, 1e-05
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 2e-07
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 1e-05
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 9e-05
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 2e-04
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 2e-07
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 1e-06
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 3e-05
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 1e-04
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 2e-04
3t8k_A186 Uncharacterized protein; structural genomics, PSI- 2e-07
3t8k_A186 Uncharacterized protein; structural genomics, PSI- 6e-04
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 4e-07
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 4e-07
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 3e-06
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 3e-06
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 5e-06
1n11_A 437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 5e-06
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 1e-04
1dcq_A278 PYK2-associated protein beta; zinc-binding module, 4e-07
2vge_A229 RELA-associated inhibitor; iaspp, nucleus, apoptos 4e-07
3twr_A165 Tankyrase-2; ankyrin repeat, protein-protein inter 4e-07
3twr_A165 Tankyrase-2; ankyrin repeat, protein-protein inter 4e-05
3twr_A165 Tankyrase-2; ankyrin repeat, protein-protein inter 2e-04
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 6e-07
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 4e-06
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 1e-05
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 2e-05
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 4e-04
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 5e-04
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 6e-07
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 8e-07
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 2e-06
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 9e-07
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 7e-06
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 2e-04
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 4e-04
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 7e-04
1s70_B299 130 kDa myosin-binding subunit of smooth muscle my 9e-07
1s70_B299 130 kDa myosin-binding subunit of smooth muscle my 1e-05
1s70_B299 130 kDa myosin-binding subunit of smooth muscle my 1e-04
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 1e-06
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 8e-06
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 2e-05
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 5e-05
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 6e-04
3lvq_E497 ARF-GAP with SH3 domain, ANK repeat and PH domain 2e-06
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 2e-06
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 9e-06
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 1e-04
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 3e-04
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 6e-04
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 3e-06
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 9e-06
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 1e-05
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 3e-05
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 4e-06
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 5e-06
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 4e-05
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 1e-04
3aji_A231 26S proteasome non-ATPase regulatory subunit 10; g 4e-06
3aji_A231 26S proteasome non-ATPase regulatory subunit 10; g 7e-05
3aji_A231 26S proteasome non-ATPase regulatory subunit 10; g 7e-05
3aji_A231 26S proteasome non-ATPase regulatory subunit 10; g 2e-04
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 5e-06
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 1e-05
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 1e-05
3d9h_A285 CDNA FLJ77766, highly similar to HOMO sapiens anky 5e-06
3d9h_A285 CDNA FLJ77766, highly similar to HOMO sapiens anky 3e-05
3d9h_A285 CDNA FLJ77766, highly similar to HOMO sapiens anky 6e-05
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 5e-06
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 8e-05
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 1e-05
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 1e-05
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 2e-05
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 3e-04
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 7e-04
3ui2_A244 Signal recognition particle 43 kDa protein, chlor; 2e-05
3ui2_A244 Signal recognition particle 43 kDa protein, chlor; 2e-05
3deo_A183 Signal recognition particle 43 kDa protein; chloro 2e-05
3deo_A183 Signal recognition particle 43 kDa protein; chloro 3e-05
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 2e-05
3c5r_A137 BARD-1, BRCA1-associated ring domain protein 1; an 2e-05
3c5r_A137 BARD-1, BRCA1-associated ring domain protein 1; an 1e-04
2zgd_A110 3 repeat synthetic ankyrin; ankyrin repeat, hydrox 2e-05
1awc_B153 Protein (GA binding protein beta 1); complex (tran 3e-05
1awc_B153 Protein (GA binding protein beta 1); complex (tran 4e-05
1awc_B153 Protein (GA binding protein beta 1); complex (tran 1e-04
3v31_A167 Ankyrin repeat family A protein 2; structural geno 3e-05
3v31_A167 Ankyrin repeat family A protein 2; structural geno 9e-05
3hra_A201 Ankyrin repeat family protein; structural protein; 5e-05
3hra_A201 Ankyrin repeat family protein; structural protein; 9e-05
3hra_A201 Ankyrin repeat family protein; structural protein; 2e-04
3b7b_A237 Euchromatic histone-lysine N-methyltransferase 1; 5e-05
3b7b_A237 Euchromatic histone-lysine N-methyltransferase 1; 7e-05
3b7b_A237 Euchromatic histone-lysine N-methyltransferase 1; 2e-04
3v30_A172 DNA-binding protein rfxank; structural genomics co 6e-05
3v30_A172 DNA-binding protein rfxank; structural genomics co 6e-05
3v30_A172 DNA-binding protein rfxank; structural genomics co 4e-04
2rfm_A192 Putative ankyrin repeat protein TV1425; ANK repeat 6e-05
2rfm_A192 Putative ankyrin repeat protein TV1425; ANK repeat 2e-04
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 7e-05
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 2e-04
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 3e-04
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 3e-04
2b0o_E301 UPLC1; arfgap, structural genomics, structural gen 8e-05
3eu9_A240 Huntingtin-interacting protein 14; epigenetics, an 1e-04
3eu9_A240 Huntingtin-interacting protein 14; epigenetics, an 3e-04
2y1l_E169 Darpin-8.4; hydrolase-inhibitor complex, DEVD darp 1e-04
2y1l_E169 Darpin-8.4; hydrolase-inhibitor complex, DEVD darp 3e-04
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 1e-04
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 2e-04
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 3e-04
2l6b_A115 NR1C; ankyrin, consensus, repeat protein, ising mo 2e-04
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 2e-04
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 5e-04
1n0r_A126 4ANK, 4 ankyrin repeats; structural protein; 1.50A 2e-04
3jue_A368 Arfgap with coiled-coil, ANK repeat and PH domain 4e-04
2pnn_A273 Transient receptor potential cation channel subfa 5e-04
3aaa_C123 Myotrophin, protein V-1; actin capping protein, ba 6e-04
3jxi_A260 Vanilloid receptor-related osmotically activated p 6e-04
1bi7_B156 P16INK4A, MTS1, multiple tumor suppressor; cyclin 7e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 71.0 bits (173), Expect = 2e-13
 Identities = 66/410 (16%), Positives = 128/410 (31%), Gaps = 124/410 (30%)

Query: 7   VIPILVAAFHCQLNQLRSPCIQRVKELPDEVSSEIKSLRVKSNQECEANIAEVDPMHATR 66
           ++ +   AF    +          K++ D   S      + S +E +  I   D +  T 
Sbjct: 21  ILSVFEDAFVDNFD---------CKDVQDMPKS------ILSKEEIDHIIMSKDAVSGTL 65

Query: 67  V--------------RGIHEALD-SYDFELLKLLLDESNVT--LDDAYALHYAAAYCSPK 109
                          + + E L  +Y F L+  +  E      +   Y       Y   +
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVLRINYKF-LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124

Query: 110 VFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAI- 168
           VF +         N+   + +  L  A     PA  V +    G        G+T VA+ 
Sbjct: 125 VFAK--------YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS-------GKTWVALD 169

Query: 169 -CR--RMTRRKD----YIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMA-- 219
            C   ++  + D    ++         N     +++L++ + +  +  N    S+  +  
Sbjct: 170 VCLSYKVQCKMDFKIFWL---NLKNC-NSPETVLEMLQKLLYQ--IDPNWTSRSDHSSNI 223

Query: 220 ----DDFQMKLNYLENRVSFARCLFPSEAIIAMDIADA---DATNF-CTGLSASKSKG-- 269
                  Q +L  L     +  CL     ++ +++ +A   +A N  C  L  ++ K   
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCL-----LVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278

Query: 270 ---SSGNLKEVDLN---------ETPSMQAKRL--AFTEL------------SMIA---- 299
              S+     + L+         E  S+  K L     +L            S+IA    
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR 338

Query: 300 VETGR-RYFPHS-----SKVIEEFMNCDWSDASLLEFGTPEAQKLKRACF 343
                   + H      + +IE  +N        LE    E +K+     
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNV-------LE--PAEYRKMFDRLS 379
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 Back     alignment and structure
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 Back     alignment and structure
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 Back     alignment and structure
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156 Back     alignment and structure
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156 Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 Back     alignment and structure
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186 Back     alignment and structure
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278 Back     alignment and structure
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229 Back     alignment and structure
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165 Back     alignment and structure
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165 Back     alignment and structure
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 Back     alignment and structure
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 Back     alignment and structure
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 Back     alignment and structure
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 Back     alignment and structure
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497 Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 Back     alignment and structure
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231 Back     alignment and structure
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231 Back     alignment and structure
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231 Back     alignment and structure
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231 Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 Back     alignment and structure
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 Back     alignment and structure
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 Back     alignment and structure
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 Back     alignment and structure
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244 Back     alignment and structure
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244 Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136 Back     alignment and structure
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137 Back     alignment and structure
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137 Back     alignment and structure
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110 Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153 Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153 Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153 Back     alignment and structure
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 Back     alignment and structure
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 Back     alignment and structure
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201 Back     alignment and structure
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201 Back     alignment and structure
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201 Back     alignment and structure
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 Back     alignment and structure
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 Back     alignment and structure
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 Back     alignment and structure
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 Back     alignment and structure
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 Back     alignment and structure
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 Back     alignment and structure
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192 Back     alignment and structure
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192 Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 Back     alignment and structure
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301 Back     alignment and structure
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240 Back     alignment and structure
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240 Back     alignment and structure
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169 Back     alignment and structure
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169 Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 Back     alignment and structure
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115 Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 Back     alignment and structure
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126 Back     alignment and structure
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368 Back     alignment and structure
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273 Back     alignment and structure
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123 Back     alignment and structure
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260 Back     alignment and structure
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query371
4gpm_A169 Engineered protein OR264; de novo protein, structu 99.94
4gpm_A169 Engineered protein OR264; de novo protein, structu 99.92
1d9s_A136 Cyclin-dependent kinase 4 inhibitor B; helix-turn- 99.91
2y1l_E169 Darpin-8.4; hydrolase-inhibitor complex, DEVD darp 99.91
2rfa_A232 Transient receptor potential cation channel subfa 99.91
3v31_A167 Ankyrin repeat family A protein 2; structural geno 99.9
2rfm_A192 Putative ankyrin repeat protein TV1425; ANK repeat 99.9
4b93_B269 Ankyrin repeat domain-containing protein 27; endoc 99.9
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 99.9
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 99.9
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 99.9
1awc_B153 Protein (GA binding protein beta 1); complex (tran 99.9
3hra_A201 Ankyrin repeat family protein; structural protein; 99.9
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 99.9
3v30_A172 DNA-binding protein rfxank; structural genomics co 99.9
2rfm_A192 Putative ankyrin repeat protein TV1425; ANK repeat 99.9
3twr_A165 Tankyrase-2; ankyrin repeat, protein-protein inter 99.9
1awc_B153 Protein (GA binding protein beta 1); complex (tran 99.9
1n0r_A126 4ANK, 4 ankyrin repeats; structural protein; 1.50A 99.89
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 99.89
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 99.89
3v31_A167 Ankyrin repeat family A protein 2; structural geno 99.89
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 99.89
2y1l_E169 Darpin-8.4; hydrolase-inhibitor complex, DEVD darp 99.89
3aji_A231 26S proteasome non-ATPase regulatory subunit 10; g 99.89
3aji_A231 26S proteasome non-ATPase regulatory subunit 10; g 99.89
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 99.89
2etb_A256 Transient receptor potential cation channel subfam 99.89
1bi7_B156 P16INK4A, MTS1, multiple tumor suppressor; cyclin 99.89
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 99.89
1s70_B299 130 kDa myosin-binding subunit of smooth muscle my 99.89
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 99.89
3twr_A165 Tankyrase-2; ankyrin repeat, protein-protein inter 99.89
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 99.89
3c5r_A137 BARD-1, BRCA1-associated ring domain protein 1; an 99.89
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 99.88
3d9h_A285 CDNA FLJ77766, highly similar to HOMO sapiens anky 99.88
3aaa_C123 Myotrophin, protein V-1; actin capping protein, ba 99.88
3v30_A172 DNA-binding protein rfxank; structural genomics co 99.88
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 99.88
1bd8_A156 P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr 99.88
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 99.88
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 99.88
3b7b_A237 Euchromatic histone-lysine N-methyltransferase 1; 99.88
3b7b_A237 Euchromatic histone-lysine N-methyltransferase 1; 99.88
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 99.88
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 99.88
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 99.88
1n11_A 437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 99.88
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 99.88
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 99.88
3hra_A201 Ankyrin repeat family protein; structural protein; 99.88
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 99.88
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 99.88
4hbd_A276 KN motif and ankyrin repeat domain-containing Pro; 99.88
1bd8_A156 P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr 99.87
3jxi_A260 Vanilloid receptor-related osmotically activated p 99.87
2rfa_A232 Transient receptor potential cation channel subfa 99.87
4b93_B269 Ankyrin repeat domain-containing protein 27; endoc 99.87
3jxi_A260 Vanilloid receptor-related osmotically activated p 99.87
2etb_A256 Transient receptor potential cation channel subfam 99.87
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 99.87
2pnn_A273 Transient receptor potential cation channel subfa 99.87
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 99.87
3d9h_A285 CDNA FLJ77766, highly similar to HOMO sapiens anky 99.87
4g8k_A337 2-5A-dependent ribonuclease; ankyrin-repeat domain 99.87
2pnn_A273 Transient receptor potential cation channel subfa 99.87
3eu9_A240 Huntingtin-interacting protein 14; epigenetics, an 99.86
1s70_B299 130 kDa myosin-binding subunit of smooth muscle my 99.86
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 99.86
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 99.86
2vge_A229 RELA-associated inhibitor; iaspp, nucleus, apoptos 99.86
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 99.86
1sw6_A327 Regulatory protein SWI6; transcription regulation, 99.86
4hbd_A276 KN motif and ankyrin repeat domain-containing Pro; 99.86
3deo_A183 Signal recognition particle 43 kDa protein; chloro 99.86
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 99.86
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 99.85
3t8k_A186 Uncharacterized protein; structural genomics, PSI- 99.85
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 99.85
3t8k_A186 Uncharacterized protein; structural genomics, PSI- 99.85
3ui2_A244 Signal recognition particle 43 kDa protein, chlor; 99.84
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 99.84
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 99.84
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 99.83
4g8k_A337 2-5A-dependent ribonuclease; ankyrin-repeat domain 99.83
3eu9_A240 Huntingtin-interacting protein 14; epigenetics, an 99.83
1n0q_A93 3ANK, 3 ankyrin repeats; structural protein; 1.26A 99.82
1dcq_A278 PYK2-associated protein beta; zinc-binding module, 99.81
2l6b_A115 NR1C; ankyrin, consensus, repeat protein, ising mo 99.81
1n0q_A93 3ANK, 3 ankyrin repeats; structural protein; 1.26A 99.81
3lvq_E497 ARF-GAP with SH3 domain, ANK repeat and PH domain 99.81
1bi7_B156 P16INK4A, MTS1, multiple tumor suppressor; cyclin 99.81
2vge_A229 RELA-associated inhibitor; iaspp, nucleus, apoptos 99.8
1sw6_A327 Regulatory protein SWI6; transcription regulation, 99.8
3jue_A368 Arfgap with coiled-coil, ANK repeat and PH domain 99.79
2b0o_E301 UPLC1; arfgap, structural genomics, structural gen 99.79
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 99.76
1d9s_A136 Cyclin-dependent kinase 4 inhibitor B; helix-turn- 99.75
3aaa_C123 Myotrophin, protein V-1; actin capping protein, ba 99.75
3c5r_A137 BARD-1, BRCA1-associated ring domain protein 1; an 99.75
2b0o_E301 UPLC1; arfgap, structural genomics, structural gen 99.75
1n0r_A126 4ANK, 4 ankyrin repeats; structural protein; 1.50A 99.75
2l6b_A115 NR1C; ankyrin, consensus, repeat protein, ising mo 99.71
2zgd_A110 3 repeat synthetic ankyrin; ankyrin repeat, hydrox 99.71
2aja_A376 Ankyrin repeat family protein; NESG, Q5ZSV0, struc 99.7
3lvq_E497 ARF-GAP with SH3 domain, ANK repeat and PH domain 99.7
1dcq_A278 PYK2-associated protein beta; zinc-binding module, 99.69
3ui2_A244 Signal recognition particle 43 kDa protein, chlor; 99.69
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 99.68
2zgd_A110 3 repeat synthetic ankyrin; ankyrin repeat, hydrox 99.67
2aja_A376 Ankyrin repeat family protein; NESG, Q5ZSV0, struc 99.66
3deo_A183 Signal recognition particle 43 kDa protein; chloro 99.65
3jue_A368 Arfgap with coiled-coil, ANK repeat and PH domain 99.64
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A Back     alignment and structure
Probab=99.94  E-value=8.4e-26  Score=197.56  Aligned_cols=127  Identities=29%  Similarity=0.349  Sum_probs=116.2

Q ss_pred             CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHH
Q 043128           60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHV  135 (371)
Q Consensus        60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~  135 (371)
                      |..|.+|.||||+|+..++.+++++|++.| ++   |.+|+||||+|+..|+.+++..|| .+|+++|.+|..|+||||+
T Consensus        31 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~gadvn~~d~~G~TpLh~  109 (169)
T 4gpm_A           31 NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHH  109 (169)
T ss_dssp             TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHH
T ss_pred             CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHH-HCcCCCCCCCCCCCCHHHH
Confidence            445779999999999999999999999999 55   478999999999999999877766 6799999999999999999


Q ss_pred             HHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCC
Q 043128          136 AARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQE  187 (371)
Q Consensus       136 Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t  187 (371)
                      |+..|+.+++++|+++|++++.+|.+|+||||+|+..|+...+..+.+.|.+
T Consensus       110 A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~  161 (169)
T 4gpm_A          110 AAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGW  161 (169)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC---
T ss_pred             HHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence            9999999999999999999999999999999999999999999999999864
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A Back     alignment and structure
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Back     alignment and structure
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Back     alignment and structure
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Back     alignment and structure
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Back     alignment and structure
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Back     alignment and structure
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Back     alignment and structure
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Back     alignment and structure
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Back     alignment and structure
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Back     alignment and structure
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Back     alignment and structure
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Back     alignment and structure
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Back     alignment and structure
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Back     alignment and structure
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Back     alignment and structure
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Back     alignment and structure
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Back     alignment and structure
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Back     alignment and structure
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Back     alignment and structure
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Back     alignment and structure
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Back     alignment and structure
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Back     alignment and structure
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Back     alignment and structure
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Back     alignment and structure
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Back     alignment and structure
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Back     alignment and structure
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} Back     alignment and structure
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Back     alignment and structure
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* Back     alignment and structure
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Back     alignment and structure
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} Back     alignment and structure
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* Back     alignment and structure
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Back     alignment and structure
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Back     alignment and structure
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Back     alignment and structure
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* Back     alignment and structure
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Back     alignment and structure
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Back     alignment and structure
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Back     alignment and structure
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Back     alignment and structure
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Back     alignment and structure
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Back     alignment and structure
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Back     alignment and structure
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Back     alignment and structure
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* Back     alignment and structure
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Back     alignment and structure
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Back     alignment and structure
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Back     alignment and structure
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Back     alignment and structure
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Back     alignment and structure
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Back     alignment and structure
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Back     alignment and structure
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A Back     alignment and structure
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Back     alignment and structure
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Back     alignment and structure
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Back     alignment and structure
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Back     alignment and structure
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Back     alignment and structure
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Back     alignment and structure
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Back     alignment and structure
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Back     alignment and structure
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Back     alignment and structure
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Back     alignment and structure
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Back     alignment and structure
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Back     alignment and structure
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Back     alignment and structure
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 371
d1n11a_ 408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 6e-08
d1n11a_408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 4e-07
d1n11a_408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 1e-05
d1n11a_408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 2e-04
d1n11a_408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 3e-04
d1wdya_285 d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas 9e-08
d1wdya_285 d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas 1e-05
d1sw6a_301 d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker 4e-07
d1ixva_229 d.211.1.1 (A:) 26S proteasome non-ATPase regulator 1e-06
d1ixva_229 d.211.1.1 (A:) 26S proteasome non-ATPase regulator 5e-04
d1s70b_291 d.211.1.1 (B:) Myosin phosphatase targeting subuni 3e-05
d2fo1e1277 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele 7e-05
d2fo1e1277 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele 1e-04
d1oy3d_255 d.211.1.1 (D:) Transcription factor inhibitor I-ka 3e-04
d1oy3d_255 d.211.1.1 (D:) Transcription factor inhibitor I-ka 0.004
d1uoha_223 d.211.1.1 (A:) 26S proteasome non-ATPase regulator 0.001
d1iknd_221 d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien 0.001
d2ajaa1346 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 0.002
d1k1aa_228 d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 0.003
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (122), Expect = 6e-08
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 98  ALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASE 157
            LH A+      + K +L    A  N+ + +  T LH+AAR     V   LL      + 
Sbjct: 3   PLHVASFMGHLPIVKNLLQRG-ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 158 TTSDGQTA 165
              D QT 
Sbjct: 62  KAKDDQTP 69
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 Back     information, alignment and structure
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 Back     information, alignment and structure
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301 Back     information, alignment and structure
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229 Back     information, alignment and structure
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229 Back     information, alignment and structure
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291 Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255 Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255 Back     information, alignment and structure
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223 Back     information, alignment and structure
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346 Back     information, alignment and structure
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query371
d1myoa_118 Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] 99.89
d1awcb_153 GA bindinig protein (GABP) beta 1 {Mouse (Mus musc 99.87
d1bi7b_125 Cell cycle inhibitor p16ink4A {Human (Homo sapiens 99.87
d1uoha_223 26S proteasome non-ATPase regulatory subunit 10, g 99.86
d1oy3d_255 Transcription factor inhibitor I-kappa-B-beta, IKB 99.85
d1ycsb1130 53BP2 {Human (Homo sapiens) [TaxId: 9606]} 99.85
d1uoha_223 26S proteasome non-ATPase regulatory subunit 10, g 99.84
d1ot8a_209 Neurogenic locus notch receptor domain {Fruit fly 99.84
d1bd8a_156 Cell cycle inhibitor p19ink4D {Human (Homo sapiens 99.83
d1oy3d_255 Transcription factor inhibitor I-kappa-B-beta, IKB 99.83
d2fo1e1277 Lin-12 {Caenorhabditis elegans [TaxId: 6239]} 99.82
d1dcqa1154 Pyk2-associated protein beta {Mouse (Mus musculus) 99.82
d1sw6a_301 Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch 99.82
d1ixva_229 26S proteasome non-ATPase regulatory subunit 10, g 99.82
d1ihba_156 p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] 99.81
d1n11a_408 Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} 99.81
d1bd8a_156 Cell cycle inhibitor p19ink4D {Human (Homo sapiens 99.8
d1iknd_221 I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 99.8
d1s70b_291 Myosin phosphatase targeting subunit 1, MYPT1 {Chi 99.79
d1n11a_408 Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} 99.79
d1ihba_156 p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] 99.79
d1ixva_229 26S proteasome non-ATPase regulatory subunit 10, g 99.78
d1k1aa_228 bcl-3 {Human (Homo sapiens) [TaxId: 9606]} 99.78
d2fo1e1277 Lin-12 {Caenorhabditis elegans [TaxId: 6239]} 99.77
d1k1aa_228 bcl-3 {Human (Homo sapiens) [TaxId: 9606]} 99.77
d1wdya_285 RNase L, 2-5a-dependent ribonuclease {Human (Homo 99.75
d1iknd_221 I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 99.74
d1myoa_118 Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] 99.74
d1s70b_291 Myosin phosphatase targeting subunit 1, MYPT1 {Chi 99.72
d1dcqa1154 Pyk2-associated protein beta {Mouse (Mus musculus) 99.72
d1ycsb1130 53BP2 {Human (Homo sapiens) [TaxId: 9606]} 99.72
d2ajaa1346 Hypothetical protein LPG2416 {Legionella pneumophi 99.71
d2ajaa1346 Hypothetical protein LPG2416 {Legionella pneumophi 99.68
d1bi7b_125 Cell cycle inhibitor p16ink4A {Human (Homo sapiens 99.67
d1wdya_285 RNase L, 2-5a-dependent ribonuclease {Human (Homo 99.63
d1ot8a_209 Neurogenic locus notch receptor domain {Fruit fly 99.57
d1awcb_153 GA bindinig protein (GABP) beta 1 {Mouse (Mus musc 99.54
d1sw6a_301 Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch 99.52
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=4.4e-24  Score=173.51  Aligned_cols=103  Identities=25%  Similarity=0.256  Sum_probs=95.9

Q ss_pred             chHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcCCH
Q 043128           67 VRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEP  142 (371)
Q Consensus        67 ~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g~~  142 (371)
                      .|||++|++.|+.++|++|++.| ++   |..|+||||+|+..|+.+++..++ .+|+++|.+|..|+||||+|+.+|+.
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll-~~g~din~~d~~g~tpLh~A~~~~~~   81 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLL-LKGADINAPDKHHITPLLSAVYEGHV   81 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHH-HSSCTTTCCSSSCSCHHHHHHTTTCC
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccc-cccceeeecccccccchhhhhhcCch
Confidence            48999999999999999999999 55   478999999999999988776666 67999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCccCCCCCcHHHHHH
Q 043128          143 AVLVTLLSKGGCASETTSDGQTAVAICR  170 (371)
Q Consensus       143 ~iv~~LL~~Ga~in~~d~~G~TpLh~A~  170 (371)
                      +++++|+++|++++.+|.+|+||||+|.
T Consensus        82 ~~v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          82 SCVKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             HHHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             hhhhhhhcccccceeeCCCCCCHHHHHh
Confidence            9999999999999999999999999883
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure