Citrus Sinensis ID: 043196


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------
MVSIYSFFLVTLSVTWAHATKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCPSLTRLSK
cHHHHHHHHHHHHHHccccEEEEEEEccccccccEEEccccccccccccEEEEEcccccEEEEccccccccccccccccEEccccccEEEcccccccccEEEEEEEcccccccEEccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccHHHHHHHHcccccccccccccccEEccccccEEEEEccccccccc
cHHHHHHHHHHHHHHHcccEEEEEEEcccccEEEEEcccEEEEEccccEEEEEcccccccEEEEEEEEEEEccccEEEEEEcccccEccccccccccccEEEEEEEEHHHEEEEEEEccccEcccEEEEEccccccccEEEcccHHHHcccccEEcccEccHHHHHccHHHHcccccccccHHHHHHHHHcccEEcccccccccEEEEEccccEEEEEccccccccc
MVSIYSFFLVTLSVTWAHAtkfnitnncpntvwaaavpgggrkldngqtwtitaepgttRARIWARTncqfdasgkgkcetgdcngllecqgygtapSTLAEYALKqfndmdfidmsnidgfnvpmefsslspscnrVIKCTANilgecpnelkvpggcngpchvfktdkyccnsgncgptnfsrffkercpdvysypkddatsvftcpsgtdykvvfcpsltrlsk
MVSIYSFFLVTLSVTWAHATKFnitnncpnTVWAAAVPGGGRKLDNGQTWTItaepgttrarIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCGPTNFSRFFKERCPDVYSYPKDDAtsvftcpsgtdykvvfcpsltrlsk
MVSIYSFFLVTLSVTWAHATKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCPSLTRLSK
**SIYSFFLVTLSVTWAHATKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCPSL*****
MVSIYSFFLVTLSVTWAHATKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVF**SL*****
MVSIYSFFLVTLSVTWAHATKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCPSLTRLSK
MVSIYSFFLVTLSVTWAHATKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCPSL*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVSIYSFFLVTLSVTWAHATKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCPSLTRLSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query227 2.2.26 [Sep-21-2011]
P81370225 Thaumatin-like protein OS N/A no 0.964 0.973 0.662 1e-85
E3SU11226 Thaumatin-like protein OS N/A no 0.947 0.951 0.625 2e-80
P13046226 Pathogenesis-related prot N/A no 0.903 0.907 0.650 2e-76
Q01591238 Osmotin-like protein TPM- N/A no 0.947 0.903 0.607 3e-75
P50701246 Osmotin-like protein OSML N/A no 0.969 0.894 0.595 3e-75
P14170246 Osmotin OS=Nicotiana taba N/A no 0.969 0.894 0.591 8e-75
P25096202 Protein P21 OS=Glycine ma no no 0.881 0.990 0.641 3e-74
G5DC91200 Thaumatin-like protein 1 N/A no 0.863 0.98 0.621 6e-74
P50700244 Osmotin-like protein OSM3 yes no 0.955 0.889 0.585 1e-73
P07052226 Pathogenesis-related prot N/A no 0.903 0.907 0.622 6e-73
>sp|P81370|TLP_ACTDE Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2 Back     alignment and function desciption
 Score =  316 bits (809), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 145/219 (66%), Positives = 170/219 (77%)

Query: 2   VSIYSFFLVTLSVTWAHATKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRA 61
           +S+ +   +    T A    FNI NNCP TVWAAAVPGGG++LD GQ W I    GT  A
Sbjct: 7   LSLSALLFIAFLFTCARGATFNIINNCPFTVWAAAVPGGGKRLDRGQNWIINPGAGTKGA 66

Query: 62  RIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDG 121
           R+W RT C FD +G+GKC+TGDCNGLL+CQ +G  P+TLAEYAL QFN++DF D+S +DG
Sbjct: 67  RVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDG 126

Query: 122 FNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCGPT 181
           FNV MEFS  S  C R IKCTA+I G+CPNEL+ PGGCN PC VFKTD+YCCNSGNCG T
Sbjct: 127 FNVAMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLT 186

Query: 182 NFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCP 220
           NFS+FFK+RCPD YSYPKDD TS FTCP+GT+YKVVFCP
Sbjct: 187 NFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFCP 225




Has antifungal activity.
Actinidia deliciosa (taxid: 3627)
>sp|E3SU11|ALL13_OLEEU Thaumatin-like protein OS=Olea europaea PE=1 SV=1 Back     alignment and function description
>sp|P13046|PRR1_TOBAC Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1 Back     alignment and function description
>sp|Q01591|TPM1_SOLLC Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1 Back     alignment and function description
>sp|P50701|OS13_SOLCO Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1 Back     alignment and function description
>sp|P14170|OSMO_TOBAC Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2 Back     alignment and function description
>sp|P25096|P21_SOYBN Protein P21 OS=Glycine max PE=1 SV=1 Back     alignment and function description
>sp|G5DC91|TLP1_MANZA Thaumatin-like protein 1 (Fragment) OS=Manilkara zapota GN=TLP PE=3 SV=1 Back     alignment and function description
>sp|P50700|OSL3_ARATH Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2 Back     alignment and function description
>sp|P07052|PRR2_TOBAC Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query227
329130216223 thaumatin-like protein [Litchi chinensis 0.955 0.973 0.801 1e-102
255537367225 Osmotin precursor, putative [Ricinus com 0.955 0.964 0.764 2e-97
224108780225 predicted protein [Populus trichocarpa] 0.964 0.973 0.739 3e-96
224058573225 predicted protein [Populus trichocarpa] 0.964 0.973 0.735 3e-95
441482370225 thaumatin-like protein [Actinidia chinen 0.964 0.973 0.666 2e-84
225426801225 PREDICTED: thaumatin-like protein [Vitis 0.964 0.973 0.648 3e-84
147789487225 hypothetical protein VITISV_001194 [Viti 0.964 0.973 0.652 4e-84
225426805225 PREDICTED: thaumatin-like protein-like [ 0.964 0.973 0.652 5e-84
190358875225 RecName: Full=Thaumatin-like protein; Al 0.964 0.973 0.662 5e-84
225426807225 PREDICTED: thaumatin-like protein [Vitis 0.964 0.973 0.648 6e-84
>gi|329130216|gb|AEB77709.1| thaumatin-like protein [Litchi chinensis] Back     alignment and taxonomy information
 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/217 (80%), Positives = 196/217 (90%)

Query: 4   IYSFFLVTLSVTWAHATKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRARI 63
           + SFF + LS T  +A KF+ITNNCP T+WAAAVPGGG+KLD G+TWTITA PGT  ARI
Sbjct: 7   LLSFFAIALSTTLVYAAKFDITNNCPETIWAAAVPGGGKKLDKGETWTITAAPGTKEARI 66

Query: 64  WARTNCQFDASGKGKCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFN 123
           W RT C FDASGKGKCETGDCNG+LECQGYG+ P+TLAEYAL+QFN+MDFIDMSNIDGFN
Sbjct: 67  WGRTKCNFDASGKGKCETGDCNGVLECQGYGSPPNTLAEYALQQFNNMDFIDMSNIDGFN 126

Query: 124 VPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCGPTNF 183
           VPMEFSS SP CNRVIKCT +++G+CPNELKVPGGC GPC VFKT+++CCNSG+CGPT+F
Sbjct: 127 VPMEFSSTSPGCNRVIKCTGDLVGQCPNELKVPGGCQGPCWVFKTNEHCCNSGSCGPTDF 186

Query: 184 SRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCP 220
           SRFFK+RCPDVYSYPKDDATSVFTCPSGTDYKVVFCP
Sbjct: 187 SRFFKDRCPDVYSYPKDDATSVFTCPSGTDYKVVFCP 223




Source: Litchi chinensis

Species: Litchi chinensis

Genus: Litchi

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537367|ref|XP_002509750.1| Osmotin precursor, putative [Ricinus communis] gi|223549649|gb|EEF51137.1| Osmotin precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224108780|ref|XP_002333345.1| predicted protein [Populus trichocarpa] gi|222836270|gb|EEE74691.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224058573|ref|XP_002299549.1| predicted protein [Populus trichocarpa] gi|222846807|gb|EEE84354.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|441482370|gb|AGC39176.1| thaumatin-like protein [Actinidia chinensis] Back     alignment and taxonomy information
>gi|225426801|ref|XP_002283030.1| PREDICTED: thaumatin-like protein [Vitis vinifera] gi|147770982|emb|CAN60240.1| hypothetical protein VITISV_027469 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147789487|emb|CAN76134.1| hypothetical protein VITISV_001194 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225426805|ref|XP_002283064.1| PREDICTED: thaumatin-like protein-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|190358875|sp|P81370.2|TLP_ACTDE RecName: Full=Thaumatin-like protein; AltName: Allergen=Act d 2; Flags: Precursor gi|71057064|emb|CAI38795.2| thaumatin-like protein [Actinidia deliciosa] gi|441482368|gb|AGC39175.1| thaumatin-like protein [Actinidia deliciosa] Back     alignment and taxonomy information
>gi|225426807|ref|XP_002283082.1| PREDICTED: thaumatin-like protein [Vitis vinifera] gi|147857465|emb|CAN82850.1| hypothetical protein VITISV_030860 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query227
TAIR|locus:2139777244 OSM34 "osmotin 34" [Arabidopsi 0.955 0.889 0.585 2.5e-74
TAIR|locus:2037235239 PR5 "AT1G75040" [Arabidopsis t 0.872 0.828 0.452 3.1e-44
TAIR|locus:2037227246 AT1G75050 "AT1G75050" [Arabido 0.951 0.878 0.409 1.2e-42
TAIR|locus:2203236356 AT1G77700 "AT1G77700" [Arabido 0.885 0.564 0.408 2.8e-41
TAIR|locus:2016442247 AT1G19320 "AT1G19320" [Arabido 0.929 0.854 0.396 3.6e-41
TAIR|locus:2027161246 TLP-3 "AT1G75030" [Arabidopsis 0.955 0.882 0.394 5.3e-40
TAIR|locus:2121189345 AT4G38660 "AT4G38660" [Arabido 0.933 0.614 0.4 1.1e-39
TAIR|locus:2027864264 AT1G73620 [Arabidopsis thalian 0.947 0.814 0.379 1.3e-34
WB|WBGene00009213233 thn-1 [Caenorhabditis elegans 0.907 0.884 0.372 4.6e-34
UNIPROTKB|O80327244 TL1 "Thaumatin-like protein 1" 0.784 0.729 0.389 9.5e-34
TAIR|locus:2139777 OSM34 "osmotin 34" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
 Identities = 130/222 (58%), Positives = 169/222 (76%)

Query:     1 MVSIYSFFLVTLSVTWAHATKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTR 60
             +VS + F  + L ++ A A  F I N C  TVWAAA PGGGR+LD GQ+W +    GT  
Sbjct:     5 LVSTFIFSALLL-ISTATAATFEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGTKM 63

Query:    61 ARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNID 120
             ARIW RTNC FD+SG+G+C+TGDC+G L+C G+G  P+TLAEYAL QFN++DF D+S +D
Sbjct:    64 ARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVD 123

Query:   121 GFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSG--NC 178
             GFN+PMEFS  S +C+R++ CTA+I G+CPN L+ PGGCN PC VF+T++YCC +G  +C
Sbjct:   124 GFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSC 182

Query:   179 GPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCP 220
               T +SRFFK+RCPD YSYP+DD TS FTC + T+Y+VVFCP
Sbjct:   183 SDTEYSRFFKQRCPDAYSYPQDDPTSTFTC-TNTNYRVVFCP 223




GO:0005576 "extracellular region" evidence=ISM
GO:0051707 "response to other organism" evidence=ISS
GO:0009651 "response to salt stress" evidence=IEP
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IDA
GO:0009816 "defense response to bacterium, incompatible interaction" evidence=ISS
TAIR|locus:2037235 PR5 "AT1G75040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037227 AT1G75050 "AT1G75050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2203236 AT1G77700 "AT1G77700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027864 AT1G73620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00009213 thn-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|O80327 TL1 "Thaumatin-like protein 1" [Pyrus pyrifolia (taxid:3767)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P33679ZEAM_MAIZENo assigned EC number0.59820.96030.9603N/Ano
E3SU11ALL13_OLEEUNo assigned EC number0.62550.94710.9513N/Ano
P25871OLPA_TOBACNo assigned EC number0.58660.96470.8725N/Ano
P14170OSMO_TOBACNo assigned EC number0.59110.96910.8943N/Ano
P81370TLP_ACTDENo assigned EC number0.66210.96470.9733N/Ano
P12670NP24_SOLLCNo assigned EC number0.59190.95590.8785N/Ano
P13046PRR1_TOBACNo assigned EC number0.65070.90300.9070N/Ano
P81295PRR3_JUNASNo assigned EC number0.52330.90740.9155N/Ano
P13867IAAT_MAIZENo assigned EC number0.62250.87660.9660N/Ano
P02883THM1_THADANo assigned EC number0.54580.86780.9516N/Ano
P02884THM2_THADANo assigned EC number0.53210.91620.8851N/Ano
P07052PRR2_TOBACNo assigned EC number0.62200.90300.9070N/Ano
G5DC91TLP1_MANZANo assigned EC number0.62120.86340.98N/Ano
Q01591TPM1_SOLLCNo assigned EC number0.60730.94710.9033N/Ano
P50700OSL3_ARATHNo assigned EC number0.58550.95590.8893yesno
P50701OS13_SOLCONo assigned EC number0.59550.96910.8943N/Ano
P50702OS81_SOLCONo assigned EC number0.58140.97350.8947N/Ano
P50703OS35_SOLCONo assigned EC number0.58660.96470.876N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_Genewise1_v1.C_4720001
hypothetical protein (226 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query227
smart00205218 smart00205, THN, Thaumatin family 1e-92
pfam00314212 pfam00314, Thaumatin, Thaumatin family 3e-88
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 6e-70
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 6e-65
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 2e-46
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 3e-34
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 5e-23
>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
 Score =  270 bits (692), Expect = 1e-92
 Identities = 116/218 (53%), Positives = 143/218 (65%), Gaps = 19/218 (8%)

Query: 22  FNITNNCPNTVWAAAVP-------GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDAS 74
           F   NNCP TVWAAA+P       GGG +L++G +W + A PGT   RIWART C FDAS
Sbjct: 1   FEFVNNCPYTVWAAALPSGKPQLSGGGFELNSGASWQLDAPPGTKMGRIWARTGCNFDAS 60

Query: 75  GKGKCETGDCNGLLECQGYGT-APSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFS-SLS 132
           G+G+C TGDC G+L+C G+G   P+TLAE+AL QF  +DF D+S +DGFN+PM F+ +  
Sbjct: 61  GRGRCATGDCGGVLQCNGWGGRPPATLAEFALNQFGGLDFYDVSLVDGFNIPMSFTPTGG 120

Query: 133 PSCNRVIKCTANILGECPNELKVPGG-----CNGPCHVFKTDKYCCNSGN-----CGPTN 182
               +   CTA++  +CP EL+VPGG     CN  C VF TD+YCC  G      C PTN
Sbjct: 121 SGDCKGAGCTADLNAQCPAELQVPGGGSVVACNSACTVFGTDQYCCTGGQNNPETCPPTN 180

Query: 183 FSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCP 220
           +SR FK  CPD YSY  DD TS FTC  GT+YKV FCP
Sbjct: 181 YSRIFKNACPDAYSYAYDDPTSTFTCTGGTNYKVTFCP 218


The thaumatin family gathers proteins related to plant pathogenesis. The thaumatin family includes very basic members with extracellular and vacuolar localization. Thaumatin itsel is a potent sweet-tasting protein. Several members of this family display significant in vitro activity of inhibiting hyphal growth or spore germination of various fungi probably by a membrane permeabilizing mechanism. Length = 218

>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 227
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 98.71
cd09216 353 GH64-LPHase-like glycoside hydrolase family 64: la 91.05
cd09220 369 GH64-GluB-like glycoside hydrolase family 64: beta 88.58
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
Probab=100.00  E-value=2.8e-78  Score=523.85  Aligned_cols=197  Identities=48%  Similarity=1.015  Sum_probs=186.2

Q ss_pred             EEEEEeCCCCceeceeeC--------CCceeecCCCcEEEEcCCCCceeeeeeecccccCCCCCccccCCCCCCceeecC
Q 043196           21 KFNITNNCPNTVWAAAVP--------GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQG   92 (227)
Q Consensus        21 t~tv~N~C~~tVw~g~~p--------~~g~~L~~G~s~s~~~p~~w~sGriw~RtgC~~~~~g~~~C~TGdCgg~~~C~~   92 (227)
                      +|||+|||+||||||++|        .+||+|+||++++|.+|++| +|||||||||++|+.|+++|+||||+|.++|++
T Consensus         1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~W-sGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g   79 (219)
T cd09218           1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGW-SGRFWGRTGCSFDSSGKGSCATGDCGGGLECNG   79 (219)
T ss_pred             CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCc-ceeeeeccCCCCCCCCccccccCCCCCeeecCC
Confidence            599999999999999975        37999999999999999999 799999999999999999999999999999997


Q ss_pred             C-CCCCcceeeeeeccCCCCcceeccccCCcCCceeeeeCCC--CccCCccCcccccCCCCCCCcCCC------CccCCc
Q 043196           93 Y-GTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSP--SCNRVIKCTANILGECPNELKVPG------GCNGPC  163 (227)
Q Consensus        93 ~-g~~paTlaEftl~~~~~~d~YDvSlVdGfNlP~~i~P~~g--~C~~~~~C~~dl~~~CP~~l~~~~------gC~S~C  163 (227)
                      . |.||+|||||||++.+++|||||||||||||||+|.|+++  .| +..+|.+|||..||.||++++      ||+|||
T Consensus        80 ~~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~~~C-~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC  158 (219)
T cd09218          80 AGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGC-RTAGCVADLNAVCPAELQVKNSGGRVVACKSAC  158 (219)
T ss_pred             CCCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCCCCC-CCCcccCcccccCCHHHeeccCCCcEeeecCHH
Confidence            5 4799999999998877899999999999999999999763  69 999999999999999999862      799999


Q ss_pred             cccCCCCcCCCCC-----CCCCchhhHHHhhhCCCcccCCCCCCCCeeecCCCCceEEEee
Q 043196          164 HVFKTDKYCCNSG-----NCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFC  219 (227)
Q Consensus       164 ~~~~~~~~CC~g~-----~C~pt~ys~~fK~~CP~AYsya~DD~ts~~tC~~~~~y~VtFC  219 (227)
                      .+|++|||||+|+     +|+|+.||++||++||+||+|+|||++++|+|+++++|+|+||
T Consensus       159 ~~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         159 LAFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             HhhCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            9999999999986     7999999999999999999999999999999998899999998



This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele

>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information
>cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like Back     alignment and domain information
>cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query227
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 9e-79
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 2e-76
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 1e-71
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 5e-71
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 8e-71
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 2e-70
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 2e-61
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 6e-61
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 8e-61
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 1e-60
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 2e-60
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 2e-59
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 3e-59
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 3e-32
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 2e-29
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 6e-16
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure

Iteration: 1

Score = 289 bits (739), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 135/201 (67%), Positives = 166/201 (82%), Gaps = 7/201 (3%) Query: 22 FNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCET 81 F+I N C TVWAAA PGGGR+LD+GQ+WTIT PGTT ARIW RT+C FDA+G+GKCET Sbjct: 3 FDILNKCTYTVWAAASPGGGRRLDSGQSWTITVNPGTTNARIWGRTSCTFDANGRGKCET 62 Query: 82 GDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNRVIKC 141 GDCNGLLECQGYG+ P+TLAE+AL Q N++D+ID+S +DGFN+PM+FS R I+C Sbjct: 63 GDCNGLLECQGYGSPPNTLAEFALNQPNNLDYIDISLVDGFNIPMDFSGC-----RGIQC 117 Query: 142 TANILGECPNELKVPGGCNGPCHVFKTDKYCCNS--GNCGPTNFSRFFKERCPDVYSYPK 199 + +I G+CP+ELK PGGCN PC VFKT++YCC G+CGPT +S+FFK+RCPD YSYP+ Sbjct: 118 SVDINGQCPSELKAPGGCNNPCTVFKTNEYCCTDGPGSCGPTTYSKFFKDRCPDAYSYPQ 177 Query: 200 DDATSVFTCPSGTDYKVVFCP 220 DD TS+FTCPSGT+YKV FCP Sbjct: 178 DDKTSLFTCPSGTNYKVTFCP 198
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query227
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 4e-69
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 5e-66
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 1e-64
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 7e-63
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 2e-54
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 2e-29
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
 Score =  210 bits (534), Expect = 4e-69
 Identities = 127/204 (62%), Positives = 153/204 (75%), Gaps = 5/204 (2%)

Query: 22  FNITNNCPNTVWAAAVP-GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCE 80
           F + N CP TVWAA+VP GGGR+L+ G++W ITA  GTT ARIWART C+FDASG+G C 
Sbjct: 3   FTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCR 62

Query: 81  TGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCN-RVI 139
           TGDC G+L+C GYG AP+TLAEYALKQFN++DF D+S IDGFNVPM F     S   R  
Sbjct: 63  TGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGP 122

Query: 140 KCTANILGECPNELKVPGGCNGPCHVFKTDKYCCN---SGNCGPTNFSRFFKERCPDVYS 196
           +C  ++   CP EL+  G CN  C VFK D+YCC    + +C PTN+SR+FK +CPD YS
Sbjct: 123 RCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDAYS 182

Query: 197 YPKDDATSVFTCPSGTDYKVVFCP 220
           YPKDDATS FTCP+GT+YKVVFCP
Sbjct: 183 YPKDDATSTFTCPAGTNYKVVFCP 206


>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query227
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
3gd0_A 367 Laminaripentaose-producing beta-1,3-guluase (lphas 93.62
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
Probab=100.00  E-value=3.1e-87  Score=571.07  Aligned_cols=200  Identities=65%  Similarity=1.355  Sum_probs=195.3

Q ss_pred             eEEEEEeCCCCceeceeeCCCceeecCCCcEEEEcCCCCceeeeeeecccccCCCCCccccCCCCCCceeecCCCCCCcc
Q 043196           20 TKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPST   99 (227)
Q Consensus        20 ~t~tv~N~C~~tVw~g~~p~~g~~L~~G~s~s~~~p~~w~sGriw~RtgC~~~~~g~~~C~TGdCgg~~~C~~~g~~paT   99 (227)
                      ++|||+|+|+||||||++|++||+|+|||++++.+|++|++|||||||||+||++|+++|+||||+|.++|++.|.||+|
T Consensus         1 ~t~ti~N~C~~tVWp~~~p~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~g~pPaT   80 (200)
T 1z3q_A            1 ATFEIVNRCSYTVWAAAVPGGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQTGDCGGVLSCTAYGNPPNT   80 (200)
T ss_dssp             CEEEEEECSSSCEEEEEETTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSSCC
T ss_pred             CEEEEEeCCCCCeeceEeCCCCcccCCCCeEEEeCCCcccccceeccccCCCCCCCCccccccCcCCeeecCCCCCCCcc
Confidence            58999999999999999999999999999999999999977999999999999999999999999999999998899999


Q ss_pred             eeeeeeccCCCCcceeccccCCcCCceeeeeCCCCccCCccCcccccCCCCCCCcCCCCccCCccccCCCCcCCCCCCCC
Q 043196          100 LAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCG  179 (227)
Q Consensus       100 laEftl~~~~~~d~YDvSlVdGfNlP~~i~P~~g~C~~~~~C~~dl~~~CP~~l~~~~gC~S~C~~~~~~~~CC~g~~C~  179 (227)
                      ||||+|++.+++|||||||||||||||+|+|+++.| +.++|.+|||..||.|||+++||+|||++|++|||||+|++|+
T Consensus        81 LaEftL~~~~~~dfYDVSlVDGfNlP~~i~P~~g~C-~~~~C~~dln~~CP~~L~v~~gC~saC~af~~~~yCC~g~~C~  159 (200)
T 1z3q_A           81 LAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSGGC-RGIRCAADINGQCPGALKAPGGCNNPCTVFKTDQYCCNSGACS  159 (200)
T ss_dssp             EEEEEEEETTTEEEEEEECTTCBSSCEEEEESSSSS-CCEEECSCHHHHCCTTTEETTEECCHHHHHCCHHHHCTTSCCC
T ss_pred             eEEEEecCCCCCceeeeeeeccccCCeeeeeCCCCC-CccccccchhhhCCHHHcccCcccCcccccCCCcccCCCCCCC
Confidence            999999987789999999999999999999998889 9999999999999999999999999999999999999999999


Q ss_pred             CchhhHHHhhhCCCcccCCCCCCCCeeecCCCCceEEEeeC
Q 043196          180 PTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCP  220 (227)
Q Consensus       180 pt~ys~~fK~~CP~AYsya~DD~ts~~tC~~~~~y~VtFCP  220 (227)
                      |++||++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus       160 pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP  200 (200)
T 1z3q_A          160 PTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP  200 (200)
T ss_dssp             CCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred             chhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence            99999999999999999999999999999988999999998



>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 227
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 2e-82
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 1e-78
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 2e-76
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
 Score =  242 bits (619), Expect = 2e-82
 Identities = 126/206 (61%), Positives = 151/206 (73%), Gaps = 4/206 (1%)

Query: 19  ATKFNITNNCPNTVWAAAVP-GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKG 77
           +  F + NNCP TVWAAA P GGGR+L+ GQ+W   A PGT  ARIW RTNC FD +G+G
Sbjct: 1   SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRG 60

Query: 78  KCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNR 137
            C+TGDC G+LEC+G+G  P+TLAEYAL QF+++DF D+S IDGFN+PM F    P   +
Sbjct: 61  WCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGK 120

Query: 138 --VIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCGPTNFSRFFKERCPDVY 195
              I+CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  SR+FK+RCPD Y
Sbjct: 121 CHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAY 180

Query: 196 SYPKDDATSVFTCPSG-TDYKVVFCP 220
           SYP+DD TS FTC S  TDYKV+FCP
Sbjct: 181 SYPQDDPTSTFTCTSWTTDYKVMFCP 206


>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query227
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00  E-value=2.1e-84  Score=555.19  Aligned_cols=203  Identities=63%  Similarity=1.287  Sum_probs=195.3

Q ss_pred             ceEEEEEeCCCCceeceeeC-CCceeecCCCcEEEEcCCCCceeeeeeecccccCCCCCccccCCCCCCceeecCCCCCC
Q 043196           19 ATKFNITNNCPNTVWAAAVP-GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAP   97 (227)
Q Consensus        19 a~t~tv~N~C~~tVw~g~~p-~~g~~L~~G~s~s~~~p~~w~sGriw~RtgC~~~~~g~~~C~TGdCgg~~~C~~~g~~p   97 (227)
                      +++|||+|||+|||||+++| ++|++|+||+++++.+|++|++|||||||||+||++|+++|+||||+|.++|++.|.||
T Consensus         1 ~~~fti~N~C~~TVWp~~~p~~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCgg~l~C~~~G~pP   80 (208)
T d1auna_           1 SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPP   80 (208)
T ss_dssp             CCEEEEEECSSSCEEEEEETTTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSS
T ss_pred             CCEEEEEeCCCCCcccccccCCCCcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcCCeEecCCCCCCC
Confidence            46899999999999999998 67999999999999999999889999999999999999999999999999999999999


Q ss_pred             cceeeeeeccCCCCcceeccccCCcCCceeeeeCCC---CccCCccCcccccCCCCCCCcCCCCccCCccccCCCCcCCC
Q 043196           98 STLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSP---SCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCN  174 (227)
Q Consensus        98 aTlaEftl~~~~~~d~YDvSlVdGfNlP~~i~P~~g---~C~~~~~C~~dl~~~CP~~l~~~~gC~S~C~~~~~~~~CC~  174 (227)
                      +|||||||++.+++|||||||||||||||+|+|+++   .| +.++|.+|||..||.|||+++||+|+|.+|++|||||+
T Consensus        81 ~TlaEftl~~~~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C-~~~~C~~dln~~CP~~L~v~~~C~saC~~~~~~~~CCt  159 (208)
T d1auna_          81 NTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKC-HGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCT  159 (208)
T ss_dssp             CCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTC-SCEEECSCHHHHCCTTTEETTEECCHHHHTCSHHHHCT
T ss_pred             cceEEEEeccCCCcceeccccccccccceEEeccCCCCCCc-CcccccCCccccCCHhhccCCCCccceeecCCCccccC
Confidence            999999999877899999999999999999999863   69 99999999999999999999999999999999999999


Q ss_pred             CCCCCCchhhHHHhhhCCCcccCCCCCCCCeeecCCC-CceEEEeeCCC
Q 043196          175 SGNCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSG-TDYKVVFCPSL  222 (227)
Q Consensus       175 g~~C~pt~ys~~fK~~CP~AYsya~DD~ts~~tC~~~-~~y~VtFCP~~  222 (227)
                      +++|+|++|+++||++||+||+|||||++|+|+|+++ ++|+|||||.|
T Consensus       160 ~~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP~g  208 (208)
T d1auna_         160 QGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPYG  208 (208)
T ss_dssp             TSCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTTC
T ss_pred             CCcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCCCC
Confidence            9999999999999999999999999999999999875 79999999975



>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure