Citrus Sinensis ID: 043196
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 227 | ||||||
| 329130216 | 223 | thaumatin-like protein [Litchi chinensis | 0.955 | 0.973 | 0.801 | 1e-102 | |
| 255537367 | 225 | Osmotin precursor, putative [Ricinus com | 0.955 | 0.964 | 0.764 | 2e-97 | |
| 224108780 | 225 | predicted protein [Populus trichocarpa] | 0.964 | 0.973 | 0.739 | 3e-96 | |
| 224058573 | 225 | predicted protein [Populus trichocarpa] | 0.964 | 0.973 | 0.735 | 3e-95 | |
| 441482370 | 225 | thaumatin-like protein [Actinidia chinen | 0.964 | 0.973 | 0.666 | 2e-84 | |
| 225426801 | 225 | PREDICTED: thaumatin-like protein [Vitis | 0.964 | 0.973 | 0.648 | 3e-84 | |
| 147789487 | 225 | hypothetical protein VITISV_001194 [Viti | 0.964 | 0.973 | 0.652 | 4e-84 | |
| 225426805 | 225 | PREDICTED: thaumatin-like protein-like [ | 0.964 | 0.973 | 0.652 | 5e-84 | |
| 190358875 | 225 | RecName: Full=Thaumatin-like protein; Al | 0.964 | 0.973 | 0.662 | 5e-84 | |
| 225426807 | 225 | PREDICTED: thaumatin-like protein [Vitis | 0.964 | 0.973 | 0.648 | 6e-84 |
| >gi|329130216|gb|AEB77709.1| thaumatin-like protein [Litchi chinensis] | Back alignment and taxonomy information |
|---|
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/217 (80%), Positives = 196/217 (90%)
Query: 4 IYSFFLVTLSVTWAHATKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRARI 63
+ SFF + LS T +A KF+ITNNCP T+WAAAVPGGG+KLD G+TWTITA PGT ARI
Sbjct: 7 LLSFFAIALSTTLVYAAKFDITNNCPETIWAAAVPGGGKKLDKGETWTITAAPGTKEARI 66
Query: 64 WARTNCQFDASGKGKCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFN 123
W RT C FDASGKGKCETGDCNG+LECQGYG+ P+TLAEYAL+QFN+MDFIDMSNIDGFN
Sbjct: 67 WGRTKCNFDASGKGKCETGDCNGVLECQGYGSPPNTLAEYALQQFNNMDFIDMSNIDGFN 126
Query: 124 VPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCGPTNF 183
VPMEFSS SP CNRVIKCT +++G+CPNELKVPGGC GPC VFKT+++CCNSG+CGPT+F
Sbjct: 127 VPMEFSSTSPGCNRVIKCTGDLVGQCPNELKVPGGCQGPCWVFKTNEHCCNSGSCGPTDF 186
Query: 184 SRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCP 220
SRFFK+RCPDVYSYPKDDATSVFTCPSGTDYKVVFCP
Sbjct: 187 SRFFKDRCPDVYSYPKDDATSVFTCPSGTDYKVVFCP 223
|
Source: Litchi chinensis Species: Litchi chinensis Genus: Litchi Family: Sapindaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255537367|ref|XP_002509750.1| Osmotin precursor, putative [Ricinus communis] gi|223549649|gb|EEF51137.1| Osmotin precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224108780|ref|XP_002333345.1| predicted protein [Populus trichocarpa] gi|222836270|gb|EEE74691.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224058573|ref|XP_002299549.1| predicted protein [Populus trichocarpa] gi|222846807|gb|EEE84354.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|441482370|gb|AGC39176.1| thaumatin-like protein [Actinidia chinensis] | Back alignment and taxonomy information |
|---|
| >gi|225426801|ref|XP_002283030.1| PREDICTED: thaumatin-like protein [Vitis vinifera] gi|147770982|emb|CAN60240.1| hypothetical protein VITISV_027469 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147789487|emb|CAN76134.1| hypothetical protein VITISV_001194 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225426805|ref|XP_002283064.1| PREDICTED: thaumatin-like protein-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|190358875|sp|P81370.2|TLP_ACTDE RecName: Full=Thaumatin-like protein; AltName: Allergen=Act d 2; Flags: Precursor gi|71057064|emb|CAI38795.2| thaumatin-like protein [Actinidia deliciosa] gi|441482368|gb|AGC39175.1| thaumatin-like protein [Actinidia deliciosa] | Back alignment and taxonomy information |
|---|
| >gi|225426807|ref|XP_002283082.1| PREDICTED: thaumatin-like protein [Vitis vinifera] gi|147857465|emb|CAN82850.1| hypothetical protein VITISV_030860 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 227 | ||||||
| TAIR|locus:2139777 | 244 | OSM34 "osmotin 34" [Arabidopsi | 0.955 | 0.889 | 0.585 | 2.5e-74 | |
| TAIR|locus:2037235 | 239 | PR5 "AT1G75040" [Arabidopsis t | 0.872 | 0.828 | 0.452 | 3.1e-44 | |
| TAIR|locus:2037227 | 246 | AT1G75050 "AT1G75050" [Arabido | 0.951 | 0.878 | 0.409 | 1.2e-42 | |
| TAIR|locus:2203236 | 356 | AT1G77700 "AT1G77700" [Arabido | 0.885 | 0.564 | 0.408 | 2.8e-41 | |
| TAIR|locus:2016442 | 247 | AT1G19320 "AT1G19320" [Arabido | 0.929 | 0.854 | 0.396 | 3.6e-41 | |
| TAIR|locus:2027161 | 246 | TLP-3 "AT1G75030" [Arabidopsis | 0.955 | 0.882 | 0.394 | 5.3e-40 | |
| TAIR|locus:2121189 | 345 | AT4G38660 "AT4G38660" [Arabido | 0.933 | 0.614 | 0.4 | 1.1e-39 | |
| TAIR|locus:2027864 | 264 | AT1G73620 [Arabidopsis thalian | 0.947 | 0.814 | 0.379 | 1.3e-34 | |
| WB|WBGene00009213 | 233 | thn-1 [Caenorhabditis elegans | 0.907 | 0.884 | 0.372 | 4.6e-34 | |
| UNIPROTKB|O80327 | 244 | TL1 "Thaumatin-like protein 1" | 0.784 | 0.729 | 0.389 | 9.5e-34 |
| TAIR|locus:2139777 OSM34 "osmotin 34" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 130/222 (58%), Positives = 169/222 (76%)
Query: 1 MVSIYSFFLVTLSVTWAHATKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTR 60
+VS + F + L ++ A A F I N C TVWAAA PGGGR+LD GQ+W + GT
Sbjct: 5 LVSTFIFSALLL-ISTATAATFEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGTKM 63
Query: 61 ARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNID 120
ARIW RTNC FD+SG+G+C+TGDC+G L+C G+G P+TLAEYAL QFN++DF D+S +D
Sbjct: 64 ARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVD 123
Query: 121 GFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSG--NC 178
GFN+PMEFS S +C+R++ CTA+I G+CPN L+ PGGCN PC VF+T++YCC +G +C
Sbjct: 124 GFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSC 182
Query: 179 GPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCP 220
T +SRFFK+RCPD YSYP+DD TS FTC + T+Y+VVFCP
Sbjct: 183 SDTEYSRFFKQRCPDAYSYPQDDPTSTFTC-TNTNYRVVFCP 223
|
|
| TAIR|locus:2037235 PR5 "AT1G75040" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2037227 AT1G75050 "AT1G75050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2203236 AT1G77700 "AT1G77700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2027864 AT1G73620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| WB|WBGene00009213 thn-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O80327 TL1 "Thaumatin-like protein 1" [Pyrus pyrifolia (taxid:3767)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_Genewise1_v1.C_4720001 | hypothetical protein (226 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 227 | |||
| smart00205 | 218 | smart00205, THN, Thaumatin family | 1e-92 | |
| pfam00314 | 212 | pfam00314, Thaumatin, Thaumatin family | 3e-88 | |
| cd09218 | 219 | cd09218, TLP-PA, allergenic/antifungal thaumatin-l | 6e-70 | |
| cd09217 | 151 | cd09217, TLP-P, thaumatin and allergenic/antifunga | 6e-65 | |
| cd09215 | 157 | cd09215, Thaumatin-like, the sweet-tasting protein | 2e-46 | |
| cd08961 | 153 | cd08961, GH64-TLP-SF, glycoside hydrolase family 6 | 3e-34 | |
| cd09219 | 229 | cd09219, TLP-F, thaumatin-like proteins: basidiomy | 5e-23 |
| >gnl|CDD|128501 smart00205, THN, Thaumatin family | Back alignment and domain information |
|---|
Score = 270 bits (692), Expect = 1e-92
Identities = 116/218 (53%), Positives = 143/218 (65%), Gaps = 19/218 (8%)
Query: 22 FNITNNCPNTVWAAAVP-------GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDAS 74
F NNCP TVWAAA+P GGG +L++G +W + A PGT RIWART C FDAS
Sbjct: 1 FEFVNNCPYTVWAAALPSGKPQLSGGGFELNSGASWQLDAPPGTKMGRIWARTGCNFDAS 60
Query: 75 GKGKCETGDCNGLLECQGYGT-APSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFS-SLS 132
G+G+C TGDC G+L+C G+G P+TLAE+AL QF +DF D+S +DGFN+PM F+ +
Sbjct: 61 GRGRCATGDCGGVLQCNGWGGRPPATLAEFALNQFGGLDFYDVSLVDGFNIPMSFTPTGG 120
Query: 133 PSCNRVIKCTANILGECPNELKVPGG-----CNGPCHVFKTDKYCCNSGN-----CGPTN 182
+ CTA++ +CP EL+VPGG CN C VF TD+YCC G C PTN
Sbjct: 121 SGDCKGAGCTADLNAQCPAELQVPGGGSVVACNSACTVFGTDQYCCTGGQNNPETCPPTN 180
Query: 183 FSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCP 220
+SR FK CPD YSY DD TS FTC GT+YKV FCP
Sbjct: 181 YSRIFKNACPDAYSYAYDDPTSTFTCTGGTNYKVTFCP 218
|
The thaumatin family gathers proteins related to plant pathogenesis. The thaumatin family includes very basic members with extracellular and vacuolar localization. Thaumatin itsel is a potent sweet-tasting protein. Several members of this family display significant in vitro activity of inhibiting hyphal growth or spore germination of various fungi probably by a membrane permeabilizing mechanism. Length = 218 |
| >gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family | Back alignment and domain information |
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| >gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs | Back alignment and domain information |
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| >gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs | Back alignment and domain information |
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| >gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense | Back alignment and domain information |
|---|
| >gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 227 | |||
| cd09218 | 219 | TLP-PA allergenic/antifungal thaumatin-like protei | 100.0 | |
| smart00205 | 218 | THN Thaumatin family. The thaumatin family gathers | 100.0 | |
| cd09219 | 229 | TLP-F thaumatin-like proteins: basidiomycete homol | 100.0 | |
| PF00314 | 213 | Thaumatin: Thaumatin family; InterPro: IPR001938 T | 100.0 | |
| cd09215 | 157 | Thaumatin-like the sweet-tasting protein, thaumati | 100.0 | |
| cd09217 | 151 | TLP-P thaumatin and allergenic/antifungal thaumati | 100.0 | |
| cd08961 | 153 | GH64-TLP-SF glycoside hydrolase family 64 (beta-1, | 100.0 | |
| PF04681 | 155 | Bys1: Blastomyces yeast-phase-specific protein; In | 98.71 | |
| cd09216 | 353 | GH64-LPHase-like glycoside hydrolase family 64: la | 91.05 | |
| cd09220 | 369 | GH64-GluB-like glycoside hydrolase family 64: beta | 88.58 |
| >cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-78 Score=523.85 Aligned_cols=197 Identities=48% Similarity=1.015 Sum_probs=186.2
Q ss_pred EEEEEeCCCCceeceeeC--------CCceeecCCCcEEEEcCCCCceeeeeeecccccCCCCCccccCCCCCCceeecC
Q 043196 21 KFNITNNCPNTVWAAAVP--------GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQG 92 (227)
Q Consensus 21 t~tv~N~C~~tVw~g~~p--------~~g~~L~~G~s~s~~~p~~w~sGriw~RtgC~~~~~g~~~C~TGdCgg~~~C~~ 92 (227)
+|||+|||+||||||++| .+||+|+||++++|.+|++| +|||||||||++|+.|+++|+||||+|.++|++
T Consensus 1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~W-sGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g 79 (219)
T cd09218 1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGW-SGRFWGRTGCSFDSSGKGSCATGDCGGGLECNG 79 (219)
T ss_pred CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCc-ceeeeeccCCCCCCCCccccccCCCCCeeecCC
Confidence 599999999999999975 37999999999999999999 799999999999999999999999999999997
Q ss_pred C-CCCCcceeeeeeccCCCCcceeccccCCcCCceeeeeCCC--CccCCccCcccccCCCCCCCcCCC------CccCCc
Q 043196 93 Y-GTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSP--SCNRVIKCTANILGECPNELKVPG------GCNGPC 163 (227)
Q Consensus 93 ~-g~~paTlaEftl~~~~~~d~YDvSlVdGfNlP~~i~P~~g--~C~~~~~C~~dl~~~CP~~l~~~~------gC~S~C 163 (227)
. |.||+|||||||++.+++|||||||||||||||+|.|+++ .| +..+|.+|||..||.||++++ ||+|||
T Consensus 80 ~~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~~~C-~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC 158 (219)
T cd09218 80 AGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGC-RTAGCVADLNAVCPAELQVKNSGGRVVACKSAC 158 (219)
T ss_pred CCCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCCCCC-CCCcccCcccccCCHHHeeccCCCcEeeecCHH
Confidence 5 4799999999998877899999999999999999999763 69 999999999999999999862 799999
Q ss_pred cccCCCCcCCCCC-----CCCCchhhHHHhhhCCCcccCCCCCCCCeeecCCCCceEEEee
Q 043196 164 HVFKTDKYCCNSG-----NCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFC 219 (227)
Q Consensus 164 ~~~~~~~~CC~g~-----~C~pt~ys~~fK~~CP~AYsya~DD~ts~~tC~~~~~y~VtFC 219 (227)
.+|++|||||+|+ +|+|+.||++||++||+||+|+|||++++|+|+++++|+|+||
T Consensus 159 ~~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC 219 (219)
T cd09218 159 LAFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219 (219)
T ss_pred HhhCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence 9999999999986 7999999999999999999999999999999998899999998
|
This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele |
| >smart00205 THN Thaumatin family | Back alignment and domain information |
|---|
| >cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs | Back alignment and domain information |
|---|
| >PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein | Back alignment and domain information |
|---|
| >cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense | Back alignment and domain information |
|---|
| >cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs | Back alignment and domain information |
|---|
| >cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins | Back alignment and domain information |
|---|
| >PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C | Back alignment and domain information |
|---|
| >cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like | Back alignment and domain information |
|---|
| >cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 227 | ||||
| 4h8t_A | 198 | Structure Of Haze Forming Proteins In White Wines: | 9e-79 | ||
| 1z3q_A | 200 | Resolution Of The Structure Of The Allergenic And A | 2e-76 | ||
| 1pcv_A | 205 | Crystal Structure Of Osmotin, A Plant Antifungal Pr | 1e-71 | ||
| 1aun_A | 208 | Pathogenesis-Related Protein 5d From Nicotiana Taba | 5e-71 | ||
| 1du5_A | 206 | The Crystal Structure Of Zeamatin. Length = 206 | 8e-71 | ||
| 2i0w_A | 207 | Crystal Structure Analysis Of Np24-I, A Thaumatin-L | 2e-70 | ||
| 3aok_A | 207 | Crystal Structure Of Sweet-Tasting Protein Thaumati | 2e-61 | ||
| 1rqw_A | 207 | Thaumatin Structure At 1.05 A Resolution Length = 2 | 6e-61 | ||
| 1thv_A | 207 | The Structures Of Three Crystal Forms Of The Sweet | 8e-61 | ||
| 1kwn_A | 207 | 1.2 A Structure Of Thaumatin Crystallized In Gel Le | 1e-60 | ||
| 2blr_A | 206 | Thaumatin Before A High Dose X-Ray "burn" Length = | 2e-60 | ||
| 2d8o_A | 207 | Structure Of Vil-Thaumatin Length = 207 | 2e-59 | ||
| 2d8p_A | 207 | Structure Of Hyper-Vil-Thaumatin Length = 207 | 3e-59 | ||
| 3zs3_A | 222 | High Resolution Structure Of Mal D 2, The Thaumatin | 3e-32 | ||
| 2ahn_A | 222 | High Resolution Structure Of A Cherry Allergen Pru | 2e-29 | ||
| 3g7m_A | 151 | Structure Of The Thaumatin-Like Xylanase Inhibitor | 6e-16 |
| >pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 | Back alignment and structure |
|
| >pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 | Back alignment and structure |
| >pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 | Back alignment and structure |
| >pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 | Back alignment and structure |
| >pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 | Back alignment and structure |
| >pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 | Back alignment and structure |
| >pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 | Back alignment and structure |
| >pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 | Back alignment and structure |
| >pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 | Back alignment and structure |
| >pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 | Back alignment and structure |
| >pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 | Back alignment and structure |
| >pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 | Back alignment and structure |
| >pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 | Back alignment and structure |
| >pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 | Back alignment and structure |
| >pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 | Back alignment and structure |
| >pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 227 | |||
| 1du5_A | 206 | Zeamatin; beta sandwich, antifungal protein; 2.50A | 4e-69 | |
| 1z3q_A | 200 | Thaumatin-like protein; beta sandwich, antifungal | 5e-66 | |
| 1aun_A | 208 | PR-5D; antifungal protein, pathogenesis-related pr | 1e-64 | |
| 2vhk_A | 206 | Thaumatin-I; kinetics of crystallization, chiralit | 7e-63 | |
| 2ahn_A | 222 | Thaumatin-like protein; allergen; 1.30A {Prunus av | 2e-54 | |
| 3g7m_A | 151 | Xylanase inhibitor TL-XI; beta-sheets, xylan degra | 2e-29 |
| >1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 | Back alignment and structure |
|---|
Score = 210 bits (534), Expect = 4e-69
Identities = 127/204 (62%), Positives = 153/204 (75%), Gaps = 5/204 (2%)
Query: 22 FNITNNCPNTVWAAAVP-GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCE 80
F + N CP TVWAA+VP GGGR+L+ G++W ITA GTT ARIWART C+FDASG+G C
Sbjct: 3 FTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCR 62
Query: 81 TGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCN-RVI 139
TGDC G+L+C GYG AP+TLAEYALKQFN++DF D+S IDGFNVPM F S R
Sbjct: 63 TGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGP 122
Query: 140 KCTANILGECPNELKVPGGCNGPCHVFKTDKYCCN---SGNCGPTNFSRFFKERCPDVYS 196
+C ++ CP EL+ G CN C VFK D+YCC + +C PTN+SR+FK +CPD YS
Sbjct: 123 RCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDAYS 182
Query: 197 YPKDDATSVFTCPSGTDYKVVFCP 220
YPKDDATS FTCP+GT+YKVVFCP
Sbjct: 183 YPKDDATSTFTCPAGTNYKVVFCP 206
|
| >1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 | Back alignment and structure |
|---|
| >1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 | Back alignment and structure |
|---|
| >2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 | Back alignment and structure |
|---|
| >2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 | Back alignment and structure |
|---|
| >3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 227 | |||
| 1z3q_A | 200 | Thaumatin-like protein; beta sandwich, antifungal | 100.0 | |
| 1aun_A | 208 | PR-5D; antifungal protein, pathogenesis-related pr | 100.0 | |
| 1du5_A | 206 | Zeamatin; beta sandwich, antifungal protein; 2.50A | 100.0 | |
| 2vhk_A | 206 | Thaumatin-I; kinetics of crystallization, chiralit | 100.0 | |
| 2ahn_A | 222 | Thaumatin-like protein; allergen; 1.30A {Prunus av | 100.0 | |
| 3g7m_A | 151 | Xylanase inhibitor TL-XI; beta-sheets, xylan degra | 100.0 | |
| 3gd0_A | 367 | Laminaripentaose-producing beta-1,3-guluase (lphas | 93.62 |
| >1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-87 Score=571.07 Aligned_cols=200 Identities=65% Similarity=1.355 Sum_probs=195.3
Q ss_pred eEEEEEeCCCCceeceeeCCCceeecCCCcEEEEcCCCCceeeeeeecccccCCCCCccccCCCCCCceeecCCCCCCcc
Q 043196 20 TKFNITNNCPNTVWAAAVPGGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAPST 99 (227)
Q Consensus 20 ~t~tv~N~C~~tVw~g~~p~~g~~L~~G~s~s~~~p~~w~sGriw~RtgC~~~~~g~~~C~TGdCgg~~~C~~~g~~paT 99 (227)
++|||+|+|+||||||++|++||+|+|||++++.+|++|++|||||||||+||++|+++|+||||+|.++|++.|.||+|
T Consensus 1 ~t~ti~N~C~~tVWp~~~p~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~g~g~pPaT 80 (200)
T 1z3q_A 1 ATFEIVNRCSYTVWAAAVPGGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQTGDCGGVLSCTAYGNPPNT 80 (200)
T ss_dssp CEEEEEECSSSCEEEEEETTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSSCC
T ss_pred CEEEEEeCCCCCeeceEeCCCCcccCCCCeEEEeCCCcccccceeccccCCCCCCCCccccccCcCCeeecCCCCCCCcc
Confidence 58999999999999999999999999999999999999977999999999999999999999999999999998899999
Q ss_pred eeeeeeccCCCCcceeccccCCcCCceeeeeCCCCccCCccCcccccCCCCCCCcCCCCccCCccccCCCCcCCCCCCCC
Q 043196 100 LAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCG 179 (227)
Q Consensus 100 laEftl~~~~~~d~YDvSlVdGfNlP~~i~P~~g~C~~~~~C~~dl~~~CP~~l~~~~gC~S~C~~~~~~~~CC~g~~C~ 179 (227)
||||+|++.+++|||||||||||||||+|+|+++.| +.++|.+|||..||.|||+++||+|||++|++|||||+|++|+
T Consensus 81 LaEftL~~~~~~dfYDVSlVDGfNlP~~i~P~~g~C-~~~~C~~dln~~CP~~L~v~~gC~saC~af~~~~yCC~g~~C~ 159 (200)
T 1z3q_A 81 LAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSGGC-RGIRCAADINGQCPGALKAPGGCNNPCTVFKTDQYCCNSGACS 159 (200)
T ss_dssp EEEEEEEETTTEEEEEEECTTCBSSCEEEEESSSSS-CCEEECSCHHHHCCTTTEETTEECCHHHHHCCHHHHCTTSCCC
T ss_pred eEEEEecCCCCCceeeeeeeccccCCeeeeeCCCCC-CccccccchhhhCCHHHcccCcccCcccccCCCcccCCCCCCC
Confidence 999999987789999999999999999999998889 9999999999999999999999999999999999999999999
Q ss_pred CchhhHHHhhhCCCcccCCCCCCCCeeecCCCCceEEEeeC
Q 043196 180 PTNFSRFFKERCPDVYSYPKDDATSVFTCPSGTDYKVVFCP 220 (227)
Q Consensus 180 pt~ys~~fK~~CP~AYsya~DD~ts~~tC~~~~~y~VtFCP 220 (227)
|++||++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus 160 pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP 200 (200)
T 1z3q_A 160 PTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP 200 (200)
T ss_dssp CCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred chhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence 99999999999999999999999999999988999999998
|
| >1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A | Back alignment and structure |
|---|
| >1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 | Back alignment and structure |
|---|
| >2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... | Back alignment and structure |
|---|
| >2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} | Back alignment and structure |
|---|
| >3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} | Back alignment and structure |
|---|
| >3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 227 | ||||
| d1auna_ | 208 | b.25.1.1 (A:) Pathogenesis-related protein 5d {Com | 2e-82 | |
| d1du5a_ | 206 | b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 | 1e-78 | |
| d1rqwa_ | 207 | b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d | 2e-76 |
| >d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Osmotin, thaumatin-like protein superfamily: Osmotin, thaumatin-like protein family: Osmotin, thaumatin-like protein domain: Pathogenesis-related protein 5d species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 242 bits (619), Expect = 2e-82
Identities = 126/206 (61%), Positives = 151/206 (73%), Gaps = 4/206 (1%)
Query: 19 ATKFNITNNCPNTVWAAAVP-GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKG 77
+ F + NNCP TVWAAA P GGGR+L+ GQ+W A PGT ARIW RTNC FD +G+G
Sbjct: 1 SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRG 60
Query: 78 KCETGDCNGLLECQGYGTAPSTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSPSCNR 137
C+TGDC G+LEC+G+G P+TLAEYAL QF+++DF D+S IDGFN+PM F P +
Sbjct: 61 WCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGK 120
Query: 138 --VIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCNSGNCGPTNFSRFFKERCPDVY 195
I+CTANI GECP L+VPGGCN PC F +YCC G CGPT SR+FK+RCPD Y
Sbjct: 121 CHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAY 180
Query: 196 SYPKDDATSVFTCPSG-TDYKVVFCP 220
SYP+DD TS FTC S TDYKV+FCP
Sbjct: 181 SYPQDDPTSTFTCTSWTTDYKVMFCP 206
|
| >d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 | Back information, alignment and structure |
|---|
| >d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 227 | |||
| d1auna_ | 208 | Pathogenesis-related protein 5d {Common tobacco (N | 100.0 | |
| d1du5a_ | 206 | Zeamatin {Maize (Zea mays) [TaxId: 4577]} | 100.0 | |
| d1rqwa_ | 207 | Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax | 100.0 |
| >d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Osmotin, thaumatin-like protein superfamily: Osmotin, thaumatin-like protein family: Osmotin, thaumatin-like protein domain: Pathogenesis-related protein 5d species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=2.1e-84 Score=555.19 Aligned_cols=203 Identities=63% Similarity=1.287 Sum_probs=195.3
Q ss_pred ceEEEEEeCCCCceeceeeC-CCceeecCCCcEEEEcCCCCceeeeeeecccccCCCCCccccCCCCCCceeecCCCCCC
Q 043196 19 ATKFNITNNCPNTVWAAAVP-GGGRKLDNGQTWTITAEPGTTRARIWARTNCQFDASGKGKCETGDCNGLLECQGYGTAP 97 (227)
Q Consensus 19 a~t~tv~N~C~~tVw~g~~p-~~g~~L~~G~s~s~~~p~~w~sGriw~RtgC~~~~~g~~~C~TGdCgg~~~C~~~g~~p 97 (227)
+++|||+|||+|||||+++| ++|++|+||+++++.+|++|++|||||||||+||++|+++|+||||+|.++|++.|.||
T Consensus 1 ~~~fti~N~C~~TVWp~~~p~~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCgg~l~C~~~G~pP 80 (208)
T d1auna_ 1 SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPP 80 (208)
T ss_dssp CCEEEEEECSSSCEEEEEETTTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSCCCSS
T ss_pred CCEEEEEeCCCCCcccccccCCCCcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcCCeEecCCCCCCC
Confidence 46899999999999999998 67999999999999999999889999999999999999999999999999999999999
Q ss_pred cceeeeeeccCCCCcceeccccCCcCCceeeeeCCC---CccCCccCcccccCCCCCCCcCCCCccCCccccCCCCcCCC
Q 043196 98 STLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSLSP---SCNRVIKCTANILGECPNELKVPGGCNGPCHVFKTDKYCCN 174 (227)
Q Consensus 98 aTlaEftl~~~~~~d~YDvSlVdGfNlP~~i~P~~g---~C~~~~~C~~dl~~~CP~~l~~~~gC~S~C~~~~~~~~CC~ 174 (227)
+|||||||++.+++|||||||||||||||+|+|+++ .| +.++|.+|||..||.|||+++||+|+|.+|++|||||+
T Consensus 81 ~TlaEftl~~~~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C-~~~~C~~dln~~CP~~L~v~~~C~saC~~~~~~~~CCt 159 (208)
T d1auna_ 81 NTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKC-HGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCT 159 (208)
T ss_dssp CCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTC-SCEEECSCHHHHCCTTTEETTEECCHHHHTCSHHHHCT
T ss_pred cceEEEEeccCCCcceeccccccccccceEEeccCCCCCCc-CcccccCCccccCCHhhccCCCCccceeecCCCccccC
Confidence 999999999877899999999999999999999863 69 99999999999999999999999999999999999999
Q ss_pred CCCCCCchhhHHHhhhCCCcccCCCCCCCCeeecCCC-CceEEEeeCCC
Q 043196 175 SGNCGPTNFSRFFKERCPDVYSYPKDDATSVFTCPSG-TDYKVVFCPSL 222 (227)
Q Consensus 175 g~~C~pt~ys~~fK~~CP~AYsya~DD~ts~~tC~~~-~~y~VtFCP~~ 222 (227)
+++|+|++|+++||++||+||+|||||++|+|+|+++ ++|+|||||.|
T Consensus 160 ~~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP~g 208 (208)
T d1auna_ 160 QGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPYG 208 (208)
T ss_dssp TSCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTTC
T ss_pred CCcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCCCC
Confidence 9999999999999999999999999999999999875 79999999975
|
| >d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} | Back information, alignment and structure |
|---|