Citrus Sinensis ID: 043272

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350------
QRKHTKTAANRQSIAAIRRELTATTTTNPSTIISPFFPATPAANRRPVHRKSKPTSNCHFKSIFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDQTYLNYLVSTGKTGGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGDDDNNNNNKSSTGASSRSSSTGTLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHRGASIVSIKTDRIAPQWHLKGQKKGDEGNLEVGGFRMRDFLKVTSPNK
cccccccccccHHHHHHHHcccccccccccEEEcccccccHHHHccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccccccccccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHcccccccHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHccccccccccccccccHEEEcccccccccHHHHHHHHHHHHHHHHHHccccccccccEcccccEEEEcccccHHHHHHHHHHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHccccccccccccEEEccccccccccEEEcccccccccccccccc
QRKHTKTAANRQSIAAIRRELtattttnpstiispffpatpaanrrpvhrkskptsnchfksiffGQLTSYTNQLLAHAKQLFQFArnypglhqnsipvidkfysstryEDELLLATAWLHRATNDQTYLNYLVStgktggtrslfawddkyVGAQVLAGRLVfegqglsgdddnnnnnksstgassrssstgtlllpqykSQAEQFICLCVQegnnnnnlqktpggllwfqpwiKLQYAATATFVVTVCSNYLTAAHASiqcsgglvqpsdlMDLARSQADYIlrknpkemsytvgfganyptqpnhrgasivsiktdriapqwhlkgqkkgdegnlevggfrmrdflkvtspnk
qrkhtktaanrqsiAAIRREltattttnpstiispffpatpaanRRPVHRKSKPTSNCHFKSIFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDQTYLNYLVSTGKTGGTRSLFAWDDKYVGAQVLAGRLVFEGqglsgdddnnnnnksstgassrssstgTLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHRGASIVSIKTDRIApqwhlkgqkkgdegnlevggfrmrdflkvtspnk
QRKHTKTAANRQSIAAIRRELtattttnpstiispFFPATPAANRRPVHRKSKPTSNCHFKSIFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDQTYLNYLVSTGKTGGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGdddnnnnnKsstgassrssstgtlllPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHRGASIVSIKTDRIAPQWHLKGQKKGDEGNLEVGGFRMRDFLKVTSPNK
********************************************************NCHFKSIFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDQTYLNYLVSTGKTGGTRSLFAWDDKYVGAQVLAGRLVFEG******************************LPQYKSQAEQFICLCV**************GLLWFQPWIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQ**HRGASIVSIKTDRIAPQWHL**************GF*************
*RKHTKTAANRQSIAAIRRELTATTTTNPSTIISPFFPATPAANRRPVHRKSKPTSNCHFKSIFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDQTYLNYLVSTGKTGGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGDDDNNNNNKSSTGASSRSSSTGTLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHRGASIVSIKTDRIAPQWHLKGQKKGDEGNLEVGGFRMRDF********
**********RQSIAAIRRELTATTTTNPSTIISPFFPATP*************TSNCHFKSIFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDQTYLNYLVSTGKTGGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGDDDNNNN***************TLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHRGASIVSIKTDRIAPQWHLKGQKKGDEGNLEVGGFRMRDFLKVTSPNK
*********************TATTTTNPSTIISPFFPATPAANRRPVHRKSKPTSNCHFKSIFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDQTYLNYLVSTGKTGGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGDDDNNNNNKSSTGASSRSSSTGTLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHRGASIVSIKTDRIAPQWHLKGQKKGDEGNLEVGGFRMRDFLKV*****
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QRKHTKTAANRQSIAAIRRELTATTTTNPSTIISPFFPATPAANRRPVHRKSKPTSNCHFKSIFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDQTYLNYLVSTGKTGGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGDDDNNNNNKSSTGASSRSSSTGTLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHRGASIVSIKTDRIAPQWHLKGQKKGDEGNLEVGGFRMRDFLKVTSPNK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query356 2.2.26 [Sep-21-2011]
O80497492 Endoglucanase 15 OS=Arabi yes no 0.634 0.459 0.543 1e-74
Q8S8Q4491 Endoglucanase 14 OS=Arabi no no 0.634 0.460 0.545 1e-72
O64889491 Endoglucanase 12 OS=Arabi no no 0.634 0.460 0.549 1e-72
O64890490 Endoglucanase 13 OS=Arabi no no 0.632 0.459 0.537 4e-71
Q9M995 627 Endoglucanase 5 OS=Arabid no no 0.643 0.365 0.457 3e-54
Q0J930 625 Endoglucanase 13 OS=Oryza yes no 0.632 0.36 0.422 1e-51
A2XYW8 625 Endoglucanase 13 OS=Oryza N/A no 0.632 0.36 0.422 2e-51
Q8L7I0 626 Endoglucanase 19 OS=Arabi no no 0.637 0.362 0.414 2e-51
Q42059 620 Endoglucanase 6 OS=Arabid no no 0.634 0.364 0.4 3e-49
Q6L4I2 629 Endoglucanase 15 OS=Oryza no no 0.654 0.370 0.406 9e-49
>sp|O80497|GUN15_ARATH Endoglucanase 15 OS=Arabidopsis thaliana GN=At2g44570 PE=2 SV=1 Back     alignment and function desciption
 Score =  280 bits (716), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 137/252 (54%), Positives = 176/252 (69%), Gaps = 26/252 (10%)

Query: 69  TSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDQT 128
           ++Y   L++HAK+LF+FA++YPG++ NSIP    FY S+ YEDELL A AWLHRAT DQT
Sbjct: 200 SAYAKTLISHAKELFEFAKDYPGVYHNSIPNAGGFYPSSGYEDELLWAAAWLHRATGDQT 259

Query: 129 YLNYLVSTGKTGGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGDDDNNNNNKSSTGASSR 188
           YL++L     +GG RS+FAWDDK++GAQVL  +LVFEG                     +
Sbjct: 260 YLDHLTQASNSGGARSVFAWDDKFLGAQVLVAKLVFEG---------------------K 298

Query: 189 SSSTGTLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVT 248
             + G ++  +YKS AEQFIC C Q+G   NN++KTPGGLLWF PW  LQY ATA+F + 
Sbjct: 299 VKNEGKMI--EYKSMAEQFICNCAQKG--FNNVKKTPGGLLWFLPWDNLQYTATASFALA 354

Query: 249 VCSNYLTAAHASIQC-SGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPN 307
             + YL AA  SIQC +G ++Q SDL++LAR+Q DYIL  NPK+MSY VG+G NYP +P+
Sbjct: 355 TYAKYLEAAQTSIQCPNGDVLQASDLLNLARAQVDYILGSNPKKMSYMVGYGTNYPKRPH 414

Query: 308 HRGASIVSIKTD 319
           HRGASIVSIK D
Sbjct: 415 HRGASIVSIKND 426

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q8S8Q4|GUN14_ARATH Endoglucanase 14 OS=Arabidopsis thaliana GN=At2g44560 PE=2 SV=2 Back     alignment and function description
>sp|O64889|GUN12_ARATH Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44540 PE=3 SV=1 Back     alignment and function description
>sp|O64890|GUN13_ARATH Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44550 PE=2 SV=1 Back     alignment and function description
>sp|Q9M995|GUN5_ARATH Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g48930 PE=2 SV=1 Back     alignment and function description
>sp|Q0J930|GUN13_ORYSJ Endoglucanase 13 OS=Oryza sativa subsp. japonica GN=GLU6 PE=2 SV=1 Back     alignment and function description
>sp|A2XYW8|GUN13_ORYSI Endoglucanase 13 OS=Oryza sativa subsp. indica GN=GLU6 PE=3 SV=2 Back     alignment and function description
>sp|Q8L7I0|GUN19_ARATH Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1 Back     alignment and function description
>sp|Q42059|GUN6_ARATH Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2 Back     alignment and function description
>sp|Q6L4I2|GUN15_ORYSJ Endoglucanase 15 OS=Oryza sativa subsp. japonica GN=Os05g0212300 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
15224908 492 endoglucanase 15 [Arabidopsis thaliana] 0.634 0.459 0.543 8e-73
449522855 491 PREDICTED: endoglucanase 13-like, partia 0.634 0.460 0.561 1e-71
449472797 489 PREDICTED: endoglucanase 12-like [Cucumi 0.634 0.462 0.561 2e-71
15224906 491 endoglucanase 14 [Arabidopsis thaliana] 0.634 0.460 0.545 6e-71
15224896 491 endoglucanase 12 [Arabidopsis thaliana] 0.634 0.460 0.549 7e-71
297828163 491 glycosyl hydrolase family 9 protein [Ara 0.634 0.460 0.541 2e-70
297828165 494 glycosyl hydrolase family 9 protein [Ara 0.632 0.455 0.537 7e-70
15224903 490 endoglucanase 13 [Arabidopsis thaliana] 0.632 0.459 0.537 3e-69
297828161 490 glycosyl hydrolase family 9 protein [Ara 0.632 0.459 0.537 5e-69
20197185277 hypothetical protein [Arabidopsis thalia 0.595 0.765 0.548 3e-66
>gi|15224908|ref|NP_181985.1| endoglucanase 15 [Arabidopsis thaliana] gi|75223201|sp|O80497.1|GUN15_ARATH RecName: Full=Endoglucanase 15; AltName: Full=Endo-1,4-beta glucanase 15; Flags: Precursor gi|3341677|gb|AAC27459.1| putative glucanase [Arabidopsis thaliana] gi|330255345|gb|AEC10439.1| endoglucanase 15 [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  280 bits (716), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 137/252 (54%), Positives = 176/252 (69%), Gaps = 26/252 (10%)

Query: 69  TSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDQT 128
           ++Y   L++HAK+LF+FA++YPG++ NSIP    FY S+ YEDELL A AWLHRAT DQT
Sbjct: 200 SAYAKTLISHAKELFEFAKDYPGVYHNSIPNAGGFYPSSGYEDELLWAAAWLHRATGDQT 259

Query: 129 YLNYLVSTGKTGGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGDDDNNNNNKSSTGASSR 188
           YL++L     +GG RS+FAWDDK++GAQVL  +LVFEG                     +
Sbjct: 260 YLDHLTQASNSGGARSVFAWDDKFLGAQVLVAKLVFEG---------------------K 298

Query: 189 SSSTGTLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVT 248
             + G ++  +YKS AEQFIC C Q+G   NN++KTPGGLLWF PW  LQY ATA+F + 
Sbjct: 299 VKNEGKMI--EYKSMAEQFICNCAQKG--FNNVKKTPGGLLWFLPWDNLQYTATASFALA 354

Query: 249 VCSNYLTAAHASIQC-SGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPN 307
             + YL AA  SIQC +G ++Q SDL++LAR+Q DYIL  NPK+MSY VG+G NYP +P+
Sbjct: 355 TYAKYLEAAQTSIQCPNGDVLQASDLLNLARAQVDYILGSNPKKMSYMVGYGTNYPKRPH 414

Query: 308 HRGASIVSIKTD 319
           HRGASIVSIK D
Sbjct: 415 HRGASIVSIKND 426

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449522855|ref|XP_004168441.1| PREDICTED: endoglucanase 13-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|449472797|ref|XP_004153697.1| PREDICTED: endoglucanase 12-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15224906|ref|NP_181984.1| endoglucanase 14 [Arabidopsis thaliana] gi|114149309|sp|Q8S8Q4.2|GUN14_ARATH RecName: Full=Endoglucanase 14; AltName: Full=Endo-1,4-beta glucanase 14; Flags: Precursor gi|3341676|gb|AAC27458.1| putative glucanase [Arabidopsis thaliana] gi|51969920|dbj|BAD43652.1| putative glucanase [Arabidopsis thaliana] gi|330255344|gb|AEC10438.1| endoglucanase 14 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15224896|ref|NP_181982.1| endoglucanase 12 [Arabidopsis thaliana] gi|75219861|sp|O64889.1|GUN12_ARATH RecName: Full=Endoglucanase 12; AltName: Full=Endo-1,4-beta glucanase 12; Flags: Precursor gi|3341674|gb|AAC27456.1| putative cellulase [Arabidopsis thaliana] gi|20197190|gb|AAM14965.1| putative cellulase [Arabidopsis thaliana] gi|330255342|gb|AEC10436.1| endoglucanase 12 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297828163|ref|XP_002881964.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp. lyrata] gi|297327803|gb|EFH58223.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297828165|ref|XP_002881965.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp. lyrata] gi|297327804|gb|EFH58224.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15224903|ref|NP_181983.1| endoglucanase 13 [Arabidopsis thaliana] gi|75219862|sp|O64890.1|GUN13_ARATH RecName: Full=Endoglucanase 13; AltName: Full=Endo-1,4-beta glucanase 13; Flags: Precursor gi|3341675|gb|AAC27457.1| putative glucanase [Arabidopsis thaliana] gi|20197189|gb|AAM14964.1| putative glucanase [Arabidopsis thaliana] gi|330255343|gb|AEC10437.1| endoglucanase 13 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297828161|ref|XP_002881963.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp. lyrata] gi|297327802|gb|EFH58222.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|20197185|gb|AAM14961.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
TAIR|locus:2042461492 GH9B12 "glycosyl hydrolase 9B1 0.334 0.241 0.631 2.6e-71
TAIR|locus:2042376491 GH9B9 "glycosyl hydrolase 9B9" 0.337 0.244 0.614 3.3e-69
TAIR|locus:2042451491 GH9B11 "glycosyl hydrolase 9B1 0.337 0.244 0.631 4.2e-69
TAIR|locus:2042441490 GH9B10 "glycosyl hydrolase 9B1 0.337 0.244 0.606 1.6e-67
TAIR|locus:2028441 627 GH9C1 "glycosyl hydrolase 9C1" 0.339 0.192 0.508 4e-55
TAIR|locus:2136073 626 GH9C3 "glycosyl hydrolase 9C3" 0.337 0.191 0.450 3.4e-49
TAIR|locus:2014205 620 GH9C2 "glycosyl hydrolase 9C2" 0.337 0.193 0.459 3e-48
TAIR|locus:2059375525 GH9B8 "glycosyl hydrolase 9B8" 0.334 0.226 0.445 6.6e-45
TAIR|locus:2035384515 GH9B5 "glycosyl hydrolase 9B5" 0.289 0.2 0.481 1.9e-43
TAIR|locus:2128394479 GH9B15 "glycosyl hydrolase 9B1 0.334 0.248 0.454 1.9e-42
TAIR|locus:2042461 GH9B12 "glycosyl hydrolase 9B12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 405 (147.6 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
 Identities = 77/122 (63%), Positives = 94/122 (77%)

Query:   199 QYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSNYLTAAH 258
             +YKS AEQFIC C Q+G NN  ++KTPGGLLWF PW  LQY ATA+F +   + YL AA 
Sbjct:   307 EYKSMAEQFICNCAQKGFNN--VKKTPGGLLWFLPWDNLQYTATASFALATYAKYLEAAQ 364

Query:   259 ASIQC-SGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHRGASIVSIK 317
              SIQC +G ++Q SDL++LAR+Q DYIL  NPK+MSY VG+G NYP +P+HRGASIVSIK
Sbjct:   365 TSIQCPNGDVLQASDLLNLARAQVDYILGSNPKKMSYMVGYGTNYPKRPHHRGASIVSIK 424

Query:   318 TD 319
              D
Sbjct:   425 ND 426
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
TAIR|locus:2042376 GH9B9 "glycosyl hydrolase 9B9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042451 GH9B11 "glycosyl hydrolase 9B11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042441 GH9B10 "glycosyl hydrolase 9B10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028441 GH9C1 "glycosyl hydrolase 9C1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136073 GH9C3 "glycosyl hydrolase 9C3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014205 GH9C2 "glycosyl hydrolase 9C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059375 GH9B8 "glycosyl hydrolase 9B8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035384 GH9B5 "glycosyl hydrolase 9B5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128394 GH9B15 "glycosyl hydrolase 9B15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.4LOW CONFIDENCE prediction!
3rd Layer3.2.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
AtGH9B12
AtGH9B12 (Arabidopsis thaliana glycosyl hydrolase 9B12); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds; Arabidopsis thaliana glycosyl hydrolase 9B12 (AtGH9B12); FUNCTIONS IN- hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN- carbohydrate metabolic process; LOCATED IN- endomembrane system; EXPRESSED IN- male gametophyte, pollen tube; EXPRESSED DURING- L mature pollen stage; CONTAINS InterPro DOMAIN/s- Six-hairpin glycosidase (InterPro-IPR012341), Glycoside hydrolase, family 9, active site (InterPro-IPR018221), Six-hairpin glycosidase-like (I [...] (492 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT3G57480
zinc finger (C2H2 type, AN1-like) family protein; zinc finger (C2H2 type, AN1-like) family prot [...] (249 aa)
      • 0.885
ESC
ESC (ESCAROLA); double-stranded DNA binding; Encodes an AT hook domain containing protein that [...] (311 aa)
      • 0.560
ACA6
ACA6 (ALPHA CARBONIC ANHYDRASE 6); carbonate dehydratase/ zinc ion binding; ALPHA CARBONIC ANHY [...] (260 aa)
      • 0.420
TRE1
TRE1 (TREHALASE 1); alpha,alpha-trehalase/ trehalase; Encodes a trehalase, member of Glycoside [...] (626 aa)
      • 0.409
EDA30
EDA30 (embryo sac development arrest 30); embryo sac development arrest 30 (EDA30); FUNCTIONS I [...] (656 aa)
      • 0.408
AT1G11910
aspartyl protease family protein; aspartyl protease family protein; FUNCTIONS IN- aspartic-type [...] (506 aa)
      • 0.408

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
PLN00119489 PLN00119, PLN00119, endoglucanase 1e-108
PLN02340 614 PLN02340, PLN02340, endoglucanase 9e-79
PLN02171 629 PLN02171, PLN02171, endoglucanase 1e-74
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 4e-63
PLN02345469 PLN02345, PLN02345, endoglucanase 4e-63
PLN02420525 PLN02420, PLN02420, endoglucanase 1e-62
PLN02613498 PLN02613, PLN02613, endoglucanase 7e-58
PLN02266510 PLN02266, PLN02266, endoglucanase 2e-46
PLN02909486 PLN02909, PLN02909, Endoglucanase 4e-41
PLN03009495 PLN03009, PLN03009, cellulase 7e-41
PLN02175484 PLN02175, PLN02175, endoglucanase 7e-40
PLN02308492 PLN02308, PLN02308, endoglucanase 2e-34
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information 
 Score =  324 bits (832), Expect = e-108
 Identities = 142/251 (56%), Positives = 173/251 (68%), Gaps = 25/251 (9%)

Query: 70  SYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDQTY 129
           +Y + L+ HAK LF+FA+ +PGL+QNSIP    FY+S+ YEDELL A AWLHRATNDQTY
Sbjct: 199 AYASILIGHAKDLFEFAKAHPGLYQNSIPNAGGFYASSGYEDELLWAAAWLHRATNDQTY 258

Query: 130 LNYLVSTGKTGGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGDDDNNNNNKSSTGASSRS 189
           L+YL     TGG R++FAWDDK+VGAQVL  +L  EG                     + 
Sbjct: 259 LDYLTQASNTGGPRTVFAWDDKFVGAQVLVAKLALEG---------------------KV 297

Query: 190 SSTGTLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTV 249
            S G ++  +YKS AEQFIC C Q+G  +NN++KTPGGLLWF PW  LQY   A+FV++ 
Sbjct: 298 ESNGKIV--EYKSMAEQFICNCAQKG--SNNVKKTPGGLLWFLPWNNLQYTTAASFVLSA 353

Query: 250 CSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHR 309
            S YL AA ASIQC  G +Q SDL+ LARSQ DYIL  NPK MSY VG+G NYP +P+HR
Sbjct: 354 YSKYLEAAKASIQCPNGALQASDLLQLARSQVDYILGSNPKNMSYMVGYGTNYPKKPHHR 413

Query: 310 GASIVSIKTDR 320
           GASIVSIK D+
Sbjct: 414 GASIVSIKKDK 424

Length = 489
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 356
PLN02340 614 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN02266510 endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN03009495 cellulase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 95.09
COG1331667 Highly conserved protein containing a thioredoxin 93.83
KOG2787403 consensus Lanthionine synthetase C-like protein 1 93.29
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 91.79
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 89.48
>PLN02340 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-72  Score=585.94  Aligned_cols=299  Identities=43%  Similarity=0.706  Sum_probs=257.1

Q ss_pred             cCCCCCceeeCCCCCCccccccCCCcCCCchhhHHhHhhhhcc-cCHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCcccc
Q 043272           24 TTTTNPSTIISPFFPATPAANRRPVHRKSKPTSNCHFKSIFFG-QLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDK  102 (356)
Q Consensus        24 ~t~~rp~~~~~~~~pgsd~a~~~~~~~~s~~aaAlA~AS~VFk-~D~ayA~kcL~aAk~ly~fA~~~pg~y~~s~~~~~g  102 (356)
                      ||++||+|+|++++||||+++++        |||||+|||||| +||+||++||+|||+||+||+++||.|.++++...+
T Consensus       159 ~~~~R~~y~i~~~~pgSd~a~e~--------AAAlAaas~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~s~~~a~~  230 (614)
T PLN02340        159 MTTPRTAYKLDQNHPGSDLAGET--------AAALAAASKAFKPYNSSYSDLLLVHAKQLFSFADKFRGLYDDSIQNAKK  230 (614)
T ss_pred             cCCcCceeecCCCCCccHHHHHH--------HHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCcccc
Confidence            48889999999999999999999        999999999999 999999999999999999999999999888888889


Q ss_pred             cCCCCcccchHHHHHHHHHHHcCChhHHHHHHHc----CCCCCCCcccCccchhHHHHHHhhhhcccCCCCCCCCCCCCC
Q 043272          103 FYSSTRYEDELLLATAWLHRATNDQTYLNYLVST----GKTGGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGDDDNNNN  178 (356)
Q Consensus       103 ~Y~ss~~~DEl~WAAawLy~ATGd~~Yl~~a~~~----~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~  178 (356)
                      ||+|++|.|||+|||+|||+||||++||+++..+    ++..|....|+||+|..|+++||++++.+++..         
T Consensus       231 ~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~~~~~~~~~~~~~~~~~~f~WD~k~~g~~~lla~~~~~~~~~---------  301 (614)
T PLN02340        231 FYTSSGYSDELLWAAAWLYRATGDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKILLEGRGG---------  301 (614)
T ss_pred             CCCCCCcchHHHHHHHHHHHHhCCHHHHHHHHHHHHhcccccccCCcCCccchhhHHHHHHHHHhhcCCcc---------
Confidence            9999999999999999999999999999999753    334455567999999999999999876433110         


Q ss_pred             CCCCCCCCCCCCcchhchHHHHHHHHHHHHHHHhcCCCCCCccccCCCCcccccCCCcHHHHHHHHHHHHHHHhhhhhcc
Q 043272          179 NKSSTGASSRSSSTGTLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSNYLTAAH  258 (356)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~g~~~~~~tp~Gl~~~~~WGSn~~aan~a~lll~ya~~~~~~~  258 (356)
                                   .....++.|++.+|.|+|.++.++.++ ++.+||+|+.|...|||+||++|++||+++|+++++.+.
T Consensus       302 -------------~~~~~~~~~~~~ad~~~~~~~~~~~g~-~v~~TpgGl~~~~~Wgn~rya~~aafl~~vyad~l~~~~  367 (614)
T PLN02340        302 -------------AYTSTLKQYQAKADYFACACLQKNGGY-NIQLTPGGLMYVREWNNLQYASSAAFLLAVYSDYLSAAN  367 (614)
T ss_pred             -------------hhHHHHHHHHHHHHHHHHhhhccCCCC-ccccCCCceEEeCCCChHHHHHHHHHHHHHHHHHhhhcc
Confidence                         112456779999999999888765555 889999999999999999999999999999999998777


Q ss_pred             cccccCCCCCChhHHHHHHHhcchhhcccCCCCCceEeecCCCCCCCCCCCCCCCCCcccCC--CCCc--ccc-CCCCCC
Q 043272          259 ASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHRGASIVSIKTDR--IAPQ--WHL-KGQKKG  333 (356)
Q Consensus       259 ~~~~~~~~~~~~~~y~~~A~~Q~dYlLG~Np~g~SyVvG~G~n~P~~PHHR~ss~~~~~~~p--~~~~--~~l-~Gal~~  333 (356)
                      ..++|+++.+.+++|++||++|||||||+||+++|||||||+|+|+|||||+||||.+..++  ..|.  |.- .....+
T Consensus       368 ~~~~c~~~~~~~~~y~~fA~sQidYiLG~NP~~~SYVVGyG~n~P~~pHHR~as~~~~~~~~~~v~c~~g~~~~~~~~~~  447 (614)
T PLN02340        368 AKLRCPDGLVQPQELLDFARSQADYILGKNPKGMSYMVGYGPKYPIHVHHRGSSIPSIFALHSTVGCVQGFDSWYRRKEA  447 (614)
T ss_pred             cccccCccccCHHHHHHHHHHhhHhhcCCCCCCCceEeccCCCCCCccccccccCCccccccccccCcccccccccCCCC
Confidence            78999988889999999999999999999999999999999999999999999999876543  2332  211 111222


Q ss_pred             ---CCCcccccCCCCCCCCCCCC
Q 043272          334 ---DEGNLEVGGFRMRDFLKVTS  353 (356)
Q Consensus       334 ---~p~~~~vGGp~~~d~~~~~~  353 (356)
                         .++|.||||||..|.|.+..
T Consensus       448 np~vL~GALVGGPd~~D~y~D~r  470 (614)
T PLN02340        448 DPNVIYGALVGGPDANDNFSDDR  470 (614)
T ss_pred             CCCCCCCceeeCCCCCCCCCccc
Confidence               23556699999999988754

>PLN00119 endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 5e-27
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 3e-19
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 9e-17
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 1e-16
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 6e-13
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 7e-11
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 8e-11
2yik_A 611 Catalytic Domain Of Clostridium Thermocellum Celt L 3e-09
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 116/255 (45%), Gaps = 57/255 (22%)
Query: 62  SIFFGQLT-SYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWL 120
           SI F  +  +Y+N LL HA+QLF FA NY G + +SI     FY+S  Y DEL+ A AWL
Sbjct: 163 SIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWL 222
Query: 121 HRATNDQTYLNYLVSTGKTGGTRSL---FAWDDKYVGAQVLAGRLVFEGQGLSGXXXXXX 177
           +RATND TYLN   S     G ++      WD K  G QVL  +L               
Sbjct: 223 YRATNDNTYLNTAESLYDEFGLQNWGGGLNWDSKVSGVQVLLAKLT-------------- 268
Query: 178 XXKXXXXXXXXXXXXXXXXXPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKL 237
                                 YK   + ++   +      NN QKTP GLL+   W  L
Sbjct: 269 ------------------NKQAYKDTVQSYVNYLI------NNQQKTPKGLLYIDMWGTL 304
Query: 238 QYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVG 297
           ++AA A F++      L AA   +  S            A++Q DY L    +  S+  G
Sbjct: 305 RHAANAAFIM------LEAAELGLSASS-------YRQFAQTQIDYALGDGGR--SFVCG 349
Query: 298 FGANYPTQPNHRGAS 312
           FG+N PT+P+HR +S
Sbjct: 350 FGSNPPTRPHHRSSS 364
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
2yik_A 611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-53
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 1e-52
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 8e-51
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 3e-48
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 2e-47
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-45
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 2e-45
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 5e-45
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 5e-43
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 1e-26
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
 Score =  185 bits (471), Expect = 1e-53
 Identities = 60/268 (22%), Positives = 99/268 (36%), Gaps = 27/268 (10%)

Query: 63  IFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHR 122
            F      Y  + L +AK LF FA   P            +Y S++++D+   A AWL+ 
Sbjct: 232 NFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGEDGPKGYYGSSKWQDDYCWAAAWLYL 291

Query: 123 ATNDQTYLNYLVSTGKT-GGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGDDDNNNNNKS 181
           AT ++ YL+              +  W+D + G   +   +      L   D  N  ++ 
Sbjct: 292 ATQNEHYLDEAFKYYDYYAPPGWIHCWNDVWSGTACILAEI----NDLYDKDSQNFEDRY 347

Query: 182 STGASSRSSSTGTLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAA 241
              ++              +    + I   +    +   +  TPGG ++   W   +Y  
Sbjct: 348 KRASNKNQ---------WEQIDFWKPIQDLLD-KWSGGGITVTPGGYVFLNQWGSARYNT 397

Query: 242 TATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGAN 301
            A  +  V   +                PS   + ARSQ DY+L KNP    Y VG+ +N
Sbjct: 398 AAQLIALVYDKHHGD------------TPSKYANWARSQMDYLLGKNPLNRCYVVGYSSN 445

Query: 302 YPTQPNHRGASIVSIKTDRIAPQWHLKG 329
               P+HR AS +    D    ++ L G
Sbjct: 446 SVKYPHHRAASGLKDANDSSPHKYVLYG 473
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query356
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
2yik_A 611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 95.86
1nc5_A373 Hypothetical protein YTER; structural genomics, he 94.46
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 93.49
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 92.72
3pmm_A382 Putative cytoplasmic protein; structural genomics, 90.38
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 89.91
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 89.44
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 86.77
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 86.6
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 82.64
3k11_A445 Putative glycosyl hydrolase; structural genomics, 81.31
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
Probab=100.00  E-value=4.4e-64  Score=510.76  Aligned_cols=269  Identities=29%  Similarity=0.437  Sum_probs=224.7

Q ss_pred             cCCCCCceeeCCCCCCccccccCCCcCCCchhhHHhHhhhhcc-cCHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCcccc
Q 043272           24 TTTTNPSTIISPFFPATPAANRRPVHRKSKPTSNCHFKSIFFG-QLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDK  102 (356)
Q Consensus        24 ~t~~rp~~~~~~~~pgsd~a~~~~~~~~s~~aaAlA~AS~VFk-~D~ayA~kcL~aAk~ly~fA~~~pg~y~~s~~~~~g  102 (356)
                      |++.||+|+|++++||||+++++        |||||+|||||| +||+||++||+|||+||+||++||+.|.  .+..++
T Consensus       155 ~~~~R~~y~i~~~~pgsd~a~e~--------AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~--~~~~~~  224 (466)
T 2xfg_A          155 MPMERPSYKVDRSSPGSTVVAET--------SAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDG--YTAANG  224 (466)
T ss_dssp             CCSCCCEEEEESSSCCHHHHHHH--------HHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTT--CCTTTT
T ss_pred             CCCCCceeEecCCCCccHHHHHH--------HHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCC--CCcccc
Confidence            66789999999999999999999        999999999999 9999999999999999999999999983  456789


Q ss_pred             cCCC-CcccchHHHHHHHHHHHcCChhHHHHHHHcCCC--------C-CCCcccCccchhHHHHHHhhhhcccCCCCCCC
Q 043272          103 FYSS-TRYEDELLLATAWLHRATNDQTYLNYLVSTGKT--------G-GTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGD  172 (356)
Q Consensus       103 ~Y~s-s~~~DEl~WAAawLy~ATGd~~Yl~~a~~~~~~--------~-~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~  172 (356)
                      ||+| ++|.|||+|||+|||+||||++||+++..+...        . ...+.|+||+|..|+++||++++  ++     
T Consensus       225 ~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~-----  297 (466)
T 2xfg_A          225 FYNSWSGFYDELSWAAVWLYLATNDSSYLDKAESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIK--ND-----  297 (466)
T ss_dssp             TSCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHHH--CS-----
T ss_pred             ccCCCCCCchHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccccccccccCcCCcchhHHHHHHHHHHhc--CC-----
Confidence            9999 999999999999999999999999999865321        0 02357999999999999999875  31     


Q ss_pred             CCCCCCCCCCCCCCCCCCcchhchHHHHHHHHHHHHHHHhcCCCCCCccccCCCCcccccCCCcHHHHHHHHHHHHHHHh
Q 043272          173 DDNNNNNKSSTGASSRSSSTGTLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSN  252 (356)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~g~~~~~~tp~Gl~~~~~WGSn~~aan~a~lll~ya~  252 (356)
                             ..                 .|++.++.+++.++++.++. ++.+||+|+.|.+.||||+|++|++||+++|++
T Consensus       298 -------~~-----------------~~~~~~~~~~~~~~~~~~~~-~~~~tp~Gl~~~~~Wgs~~~~~n~afl~~~y~~  352 (466)
T 2xfg_A          298 -------NG-----------------KYKEAIERHLDWWTTGYNGE-RITYTPKGLAWLDQWGSLRYATTTAFLACVYSD  352 (466)
T ss_dssp             -------SC-----------------HHHHHHHHHHHHHTTCBTTB-CCCBCTTSCBCCCSSSHHHHHHHHHHHHHHHHT
T ss_pred             -------cH-----------------HHHHHHHHHHHHHHhccCCC-ccccCCccccccCCCCchHHHHHHHHHHHHHHH
Confidence                   10                 24445555555555433334 789999999999999999999999999999999


Q ss_pred             hhhhcccccccCCCCCChhHHHHHHHhcchhhcccCCCCCceEeecCCCCCCCCCCCCCCCCCcc--cCCCCCccccCCC
Q 043272          253 YLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHRGASIVSIK--TDRIAPQWHLKGQ  330 (356)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~y~~~A~~Q~dYlLG~Np~g~SyVvG~G~n~P~~PHHR~ss~~~~~--~~p~~~~~~l~Ga  330 (356)
                      +++       |+  ..++++|+++|++|||||||+|  ++|||||||+|+|+|||||+|+|+...  +.|.++.+++.|+
T Consensus       353 ~~~-------~~--~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p~~pHHR~ss~~~~~~~~~p~p~~~vl~Ga  421 (466)
T 2xfg_A          353 WEN-------GD--KEKAKTYLEFARSQADYALGST--GRSFVVGFGENPPKRPHHRTAHGSWADSQMEPPEHRHVLYGA  421 (466)
T ss_dssp             CTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHHTCSSSCTTSSSSCSSCCTTC
T ss_pred             hcC-------CC--cccHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCCCCCcCchhccCccccccCCCCCCCCCccc
Confidence            863       31  2247899999999999999999  999999999999999999999997532  3345555555555


Q ss_pred             CCCCCCcccccCCCCCCCCCCCC
Q 043272          331 KKGDEGNLEVGGFRMRDFLKVTS  353 (356)
Q Consensus       331 l~~~p~~~~vGGp~~~d~~~~~~  353 (356)
                              ||||||..|.|.+..
T Consensus       422 --------LVGGP~~~D~y~D~~  436 (466)
T 2xfg_A          422 --------LVGGPDSTDNYTDDI  436 (466)
T ss_dssp             --------BCCCCCTTSCCCCCT
T ss_pred             --------eeeCCCCccCcCccc
Confidence                    599999999998653
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 356
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 5e-48
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-42
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 8e-41
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 3e-40
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-36
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-33
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  166 bits (421), Expect = 5e-48
 Identities = 69/260 (26%), Positives = 99/260 (38%), Gaps = 52/260 (20%)

Query: 63  IFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHR 122
           +F     +Y   L+ HAKQL+ FA  Y G++ + +P    + S + Y+DEL+    WL++
Sbjct: 166 VFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYK 225

Query: 123 ATNDQTYLNYLVS---------TGKTGGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGDD 173
           AT D +YL                     R   AWDDK  G  VL  +            
Sbjct: 226 ATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET---------- 275

Query: 174 DNNNNNKSSTGASSRSSSTGTLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQP 233
                                    +Y   A +++      G N   +  +PGG+     
Sbjct: 276 ----------------------GKQKYIDDANRWLDYW-TVGVNGQRVPYSPGGMAVLDT 312

Query: 234 WIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMS 293
           W  L+YAA   FV  V +  +             V+     D A  Q +Y L  NP+  S
Sbjct: 313 WGALRYAANTAFVALVYAKVIDDP----------VRKQRYHDFAVRQINYALGDNPRNSS 362

Query: 294 YTVGFGANYPTQPNHRGASI 313
           Y VGFG N P  P+HR A  
Sbjct: 363 YVVGFGNNPPRNPHHRTAHG 382
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query356
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 85.54
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 80.96
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=3.5e-56  Score=449.68  Aligned_cols=269  Identities=30%  Similarity=0.460  Sum_probs=219.0

Q ss_pred             cCCCCCceeeCCCCCCccccccCCCcCCCchhhHHhHhhhhcc-cCHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCcccc
Q 043272           24 TTTTNPSTIISPFFPATPAANRRPVHRKSKPTSNCHFKSIFFG-QLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDK  102 (356)
Q Consensus        24 ~t~~rp~~~~~~~~pgsd~a~~~~~~~~s~~aaAlA~AS~VFk-~D~ayA~kcL~aAk~ly~fA~~~pg~y~~s~~~~~g  102 (356)
                      |+..||.+++.+..|++++++++        +||||+|||||+ +||+||++||++|+++|+||+++|+.|.+..+....
T Consensus       134 ~~~~~~~~~~~~~~~~t~~~~~~--------aAalA~as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~~~~~  205 (460)
T d1tf4a1         134 MPMERPSFKVDPSCPGSDVAAET--------AAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAF  205 (460)
T ss_dssp             CCSCCCEEEEBTTBCCHHHHHHH--------HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHH
T ss_pred             CCCCCCcceecCCCccHHHHHHH--------HHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCc
Confidence            45678889999999999999999        999999999999 999999999999999999999999999877766666


Q ss_pred             cCCCCcccchHHHHHHHHHHHcCChhHHHHHHHcC----C-----CCCCCcccCccchhHHHHHHhhhhcccCCCCCCCC
Q 043272          103 FYSSTRYEDELLLATAWLHRATNDQTYLNYLVSTG----K-----TGGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGDD  173 (356)
Q Consensus       103 ~Y~ss~~~DEl~WAAawLy~ATGd~~Yl~~a~~~~----~-----~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~  173 (356)
                      +|.++++.||++|||+|||++|||++|++++....    .     .....+.++|+++..+++++|++.+  .       
T Consensus       206 ~~~~~~~~De~~wAAaeLy~aTG~~~Y~~~a~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~~--~-------  276 (460)
T d1tf4a1         206 YNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET--G-------  276 (460)
T ss_dssp             HCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHGGGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHH--C-------
T ss_pred             CCCccccchHHHHHHHHHHHHhCCHHHHHHHHHHhhhcccccccccccccccccccchhHHHHHHHHHHh--h-------
Confidence            88889999999999999999999999999997431    1     1112346899999988888887754  2       


Q ss_pred             CCCCCCCCCCCCCCCCCcchhchHHHHHHHHHHHHHHHhcCCCCCCccccCCCCcccccCCCcHHHHHHHHHHHHHHHhh
Q 043272          174 DNNNNNKSSTGASSRSSSTGTLLLPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSNY  253 (356)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~g~~~~~~tp~Gl~~~~~WGSn~~aan~a~lll~ya~~  253 (356)
                            +                 ..+++.++.+++.+.....+. .+.++|+|+.+.+.||||++++|.+|++++++++
T Consensus       277 ------~-----------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~WGsn~~~~n~a~~~~~a~~~  332 (460)
T d1tf4a1         277 ------K-----------------QKYIDDANRWLDYWTVGVNGQ-RVPYSPGGMAVLDTWGALRYAANTAFVALVYAKV  332 (460)
T ss_dssp             ------C-----------------HHHHHHHHHHHHHTTTCBTTB-CCCBCTTSCBCCCSSSHHHHHHHHHHHHHHHHHH
T ss_pred             ------h-----------------hHHHHHHHHHHHHHhhhcccc-cCCcCCCcceecCCCchHHHHHHHHHHHHHHHHH
Confidence                  1                 246777788877665543333 6778899999999999999999999999999998


Q ss_pred             hhhcccccccCCCCCChhHHHHHHHhcchhhcccCCCCCceEeecCCCCCCCCCCCCCCCCCcc--cCCCCCccccCCCC
Q 043272          254 LTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHRGASIVSIK--TDRIAPQWHLKGQK  331 (356)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~y~~~A~~Q~dYlLG~Np~g~SyVvG~G~n~P~~PHHR~ss~~~~~--~~p~~~~~~l~Gal  331 (356)
                      +...          .++.+|+++|++|||||||+||+++|||||||.|+|+|||||+++|+...  ..|.++.       
T Consensus       333 ~~~~----------~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~s~~~~~~~~~~~~p~~-------  395 (460)
T d1tf4a1         333 IDDP----------VRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWTDSIASPAENR-------  395 (460)
T ss_dssp             CCCH----------HHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHTCSSSCTTSSSSCS-------
T ss_pred             hccc----------CCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCccccCCCccccCCCCCCC-------
Confidence            6421          14579999999999999999999999999999999999999999886532  1111111       


Q ss_pred             CCCCCcccccCCCC-CCCCCC
Q 043272          332 KGDEGNLEVGGFRM-RDFLKV  351 (356)
Q Consensus       332 ~~~p~~~~vGGp~~-~d~~~~  351 (356)
                       ..++|+||||||+ .|.|-+
T Consensus       396 -~~l~G~lvGGPn~~~~~y~D  415 (460)
T d1tf4a1         396 -HVLYGALVGGPGSPNDAYTD  415 (460)
T ss_dssp             -SCCTTCBCCCCSSTTCCCCC
T ss_pred             -CCcceeEecCCCCCCCCcCc
Confidence             2346788999984 555544
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure