Citrus Sinensis ID: 043280

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
Protein Sequence
MPKHLQKSLQDYLSKIRKHTQHNIQHSSSFPPSKEWILSGCKRPKTLSFAIARGQNNNIDDDNNNNNNNNNNDAAATLSDIDRFLFENFRSLYLKDDNEDNNNNNSKKTGFEDQDDHQASFSPSPRGVLFGSPRFVEPPPDLCGSHRFFVSPGSSGSLIEEARNSLTATSEDLGSTSTSTTTLNDHSSTISNDSNDVKLPEECIAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRENSNKVPARSRNFRVARERRRRVRNVT
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHccccccccccccccccHHHHHccccccccccEEEccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEccccccccccccccccccccccccccccccccEEcccccccccccccccccccEccccccccHHHcccccccccccccccccccccccccccccccccccccEEccccEEEEEEccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccHHHcccccccc
Coil and Loop (DISEMBL)
MPKHLQKSLQDYLSKIRKHtqhniqhsssfppskewilsgckrpkTLSFAIARgqnnnidddnnnnnnnnnndaaatlsDIDRFLFENFRSLylkddnednnnnnskktgfedqddhqasfspsprgvlfgsprfvepppdlcgshrffvspgssgslIEEARNSLtatsedlgstststttlndhsstisndsndvklpEECIAVlkyspspyddFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLrensnkvparsrnFRVARERRRRVRNVT
Flexible Loop (DISEMBL)
MPKHLQKSLQDYLSKIRKHTqhniqhsssfppskeWILSGCKRPKTLSFAIARGQnnnidddnnnnNNNNNNDAAATLSDIDRFLFENFRSLylkddnednnnNNSKKTGFEDQDDHQASFSPSPRGVLFGSPRFVEPPPDLCGSHRFFVSPGSSGSLIEEARNSLTatsedlgstststttlndhsstisndsndvkLPEECIAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVlrensnkvparsrnfrvarerrrrvrnvt
Low Complexity Region (SEG)
MPKHLQKSLQDYLSKIRKHTQHNIQHSSSFPPSKEWILSGCKRPKTLSFAIARGQnnnidddnnnnnnnnnndAAATLSDIDRFLFENFRSLYLKddnednnnnnSKKTGFEDQDDHQASFSPSPRGVLFGSPRFVEPPPDLCGSHRFFVSPGSSGSLIEEARNSLTAtsedlgstststttlndhsstISNDSNDVKLPEECIAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRENSNKVParsrnfrvarerrrrvrnvT
Disordered region (IsUnstruct)
***********************************WILSGCKR**TLSFA*****************************DIDRFLFENFRSLYL*****************************************************F*****************************************************ECIAVLKYSP**Y*********MVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLR***************************
Disordered Region (DISOPRED)
*****Q*************************************************************************************L**************************************************************************************************************CIAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVL****************************
Disordered Region (DISEMBL)
*********QDYLSKIRK**************SKEWILSGCKRPKTLSFAIARGQNNNIDDDNNNNNNNNNNDAAATLSDIDRFLFENFRSLYLKDDNEDNNNNNSKKTG************PSPRGVLFGSPRFVEPPPDLCGSHRFFVSPGSSGSLIEEARNSLT**************************SNDVKLPEECIAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRENSNKVPARSRNFRVARE*********
Disordered Region (DISPRO)
MPKHLQKSLQDYLSKIRKHTQ*NIQHSSSFPPSKEWILSGCKRPKTLSFAIARG*********************ATLSDIDRFLFENFRSLYLKDD****************************RGVLFGSPRFVEPPPDLCGSHRFFVS********************************************DVKLPEECIAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLREN*************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPKHLQKSLQDYLSKIRKHTQHNIQHSSSFPPSKEWILSGCKRPKTLSFAIARGQNNNIDDDNNNNNNNNNNDAAATLSDIDRFLFENFRSLYLKDDNEDNNNNNSKKTGFEDQDDHQASFSPSPRGVLFGSPRFVEPPPDLCGSHRFFVSPGSSGSLIEEARNSLTATSEDLGSTSTSTTTLNDHSSTISNDSNDVKLPEECIAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRENSNKVPARSRNFRVARERRRRVRNVT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
224058858	295	predicted protein [Populus trichocarpa]	0.953	0.962	0.601	1e-88
255574580	291	conserved hypothetical protein [Ricinus	0.929	0.951	0.538	1e-70
357454987	311	hypothetical protein MTR_2g102140 [Medic	0.956	0.916	0.5	6e-62
297743287	309	unnamed protein product [Vitis vinifera]	0.916	0.883	0.5	5e-61
225442657	278	PREDICTED: uncharacterized protein LOC10	0.916	0.982	0.5	7e-61
351721810	249	uncharacterized protein LOC100527503 [Gl	0.808	0.967	0.477	6e-50
297839939	291	ATOFP14/OFP14 [Arabidopsis lyrata subsp.	0.889	0.910	0.426	2e-43
15220029	294	ovate family protein 14 [Arabidopsis tha	0.895	0.908	0.402	1e-42
356522009	198	PREDICTED: uncharacterized protein LOC10	0.604	0.909	0.380	1e-30
14164419	246	hypothetical protein [Oryza sativa Japon	0.677	0.821	0.330	1e-22

>gi|224058858|ref|XP_002299642.1| predicted protein [Populus trichocarpa] gi|222846900|gb|EEE84447.1| predicted protein [Populus trichocarpa]

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 186/309 (60%), Positives = 229/309 (74%), Gaps = 25/309 (8%)

Query: 1   MPKHLQKSLQDYLSKIRKHTQHNIQHSS-SFPPSKEWILSGCKRPKTLSFAIARGQNNNI 59
           MPK LQKSLQDY+ KI+  TQ NIQ SS SF  SK WIL GCK P+TLSFAIA  QN + 
Sbjct: 1   MPKKLQKSLQDYIYKIKNPTQ-NIQLSSDSFSNSKNWILRGCKHPRTLSFAIAGNQNKSR 59

Query: 60  DDDNNNNNNNNNNDAAATLSDIDRFLFENFRSLYLKDDNEDNNNNNSKKTGFEDQDDHQA 119
           D+++           AATLSD+DRFLFENFRSLY+ DD+ +    + +++   DQ     
Sbjct: 60  DEEDEEKG------GAATLSDVDRFLFENFRSLYINDDDGNFQKESDRRSRGGDQ----- 108

Query: 120 SFSPSPRGVLFGSPRFVEPPPDLCGSHRFFVSPGSS-GSLIEEARNSLTATSEDLGSTST 178
             +PS   +L  SPR+++ P DLCGSHRFFV  GSS GSL+EEAR+SLTATSE++GS+S+
Sbjct: 109 --APSMNEILIDSPRYIDQPLDLCGSHRFFVERGSSSGSLVEEARSSLTATSENMGSSSS 166

Query: 179 STTT-------LNDHSSTI-SNDSNDVKLPEECIAVLKYSPSPYDDFRRSMQEMVEARVQ 230
           S++T       LND S+T+ SND   V+LP++CIAVL YSPSPYDDFRRSMQEMVE ++Q
Sbjct: 167 SSSTSVSTTSTLNDDSATVASNDPKQVRLPDDCIAVLTYSPSPYDDFRRSMQEMVEEKLQ 226

Query: 231 HNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRENSNKVPARSRNFRVARE- 289
           +N KVDWDFMEELL CYLNLNEK S+KFILSAFVDLI  LR+N +KVP RSR+ R+AR  
Sbjct: 227 NNGKVDWDFMEELLLCYLNLNEKTSHKFILSAFVDLIVGLRKNPDKVPVRSRHSRIARSG 286

Query: 290 RRRRVRNVT 298
            RR++ NVT
Sbjct: 287 GRRKLENVT 295

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574580|ref|XP_002528201.1| conserved hypothetical protein [Ricinus communis] gi|223532413|gb|EEF34208.1| conserved hypothetical protein [Ricinus communis]

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 168/312 (53%), Positives = 211/312 (67%), Gaps = 35/312 (11%)

Query: 1   MPKHLQKSLQDYLSKIRKHTQHNIQHSSSFPPSKEWILSGCKRPKTLSFAIARGQNNNID 60
           MP  L+KSLQ+YLSK++              PS++WILSGCK PKT SFA  R ++N+  
Sbjct: 1   MPTKLKKSLQEYLSKVKNPKN----------PSRKWILSGCKHPKTPSFAFDRSRDND-- 48

Query: 61  DDNNNNNNNNNNDAAATLSDIDRFLFENFRSLYLKDDNEDNNNNNSKKT------GFEDQ 114
                 ++++ +  AATLSDIDRFL ENF+SLY+K+D+ED+N++   K       G E +
Sbjct: 49  ------DHDHRDGPAATLSDIDRFLLENFKSLYIKNDDEDHNSHQKNKVEGHREDGQESE 102

Query: 115 D-DHQASFSPSPRG-VLFGSPRFVEPPPDLCGSHRFFVSPGSSGSLIEEARNSLTATSED 172
           D  HQ    PSP G +LF SPRFVEPPP LCGSHRFFV+  SS SLIEEAR SLT T+  
Sbjct: 103 DYRHQV---PSPAGGILFDSPRFVEPPPHLCGSHRFFVAAASSSSLIEEARLSLTTTTIT 159

Query: 173 LGSTSTSTTTLNDHSSTISNDSND------VKLPEECIAVLKYSPSPYDDFRRSMQEMVE 226
             STS    + +  + + SN + D       K  ++ IAV  YS SP +DFRRSMQEMVE
Sbjct: 160 TTSTSDEGGSRSTSTRSSSNINTDYIKNVNTKFSDDYIAVKTYSRSPSNDFRRSMQEMVE 219

Query: 227 ARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRENSNKVPARSRNFRV 286
           AR+Q + KV+WDFM+ELLFCYLNLNEKKS+KFILSAFVDLI  LR+ S+ VPAR R    
Sbjct: 220 ARLQEDGKVNWDFMQELLFCYLNLNEKKSHKFILSAFVDLIVGLRQRSDDVPARPRRNSS 279

Query: 287 ARERRRRVRNVT 298
            RER+R++RNVT
Sbjct: 280 RRERKRKLRNVT 291

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357454987|ref|XP_003597774.1| hypothetical protein MTR_2g102140 [Medicago truncatula] gi|357455001|ref|XP_003597781.1| hypothetical protein MTR_2g102260 [Medicago truncatula] gi|355486822|gb|AES68025.1| hypothetical protein MTR_2g102140 [Medicago truncatula] gi|355486829|gb|AES68032.1| hypothetical protein MTR_2g102260 [Medicago truncatula]

 Score =  243 bits (621), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 159/318 (50%), Positives = 209/318 (65%), Gaps = 33/318 (10%)

Query: 1   MPKHLQKSLQDYLSKIR-KHTQHNIQHSSSFPPSKEWILSGCKRPKTLSFAIARGQNNNI 59
           MPK LQK+LQDYL+KI+ K+ Q  I+ +         +LSGCK PKT SF++  G+N + 
Sbjct: 1   MPKKLQKTLQDYLNKIKNKNPQPQIRLTK--------MLSGCKHPKTPSFSLDNGRNIS- 51

Query: 60  DDDNNNNNNNNNNDAAATLSDIDRFLFENFRSLYLKDDNEDNNNNNSKKTGFEDQDDHQA 119
              N  NNNNN  + AATL+D+DRFLFENF+SLY KDD E   NNN+        D+   
Sbjct: 52  -SSNAVNNNNNKINDAATLADVDRFLFENFKSLYFKDDEETEQNNNNNNKNKRISDEKNN 110

Query: 120 SFSPSPRG--VLFGSPRFVEPPP-DLCGSHRFFVSPGSSGSLIEEARNSLTATSEDLGST 176
              P   G   L  SPRF+  PP DLCGS RFFV PG+SGSL+E+A   L+ T+ D   +
Sbjct: 111 EEPPKRIGGSWLLESPRFITTPPQDLCGSARFFVKPGNSGSLMEDA---LSLTNSDEADS 167

Query: 177 STSTTTLNDHSSTIS--------NDSNDVKLPEECIAVLKYSPSPYDDFRRSMQEMVEAR 228
           S S  + +  +++ S        +D N   LPE C+A+L YSPSPYDDFRRSMQE+VE++
Sbjct: 168 SNSNNSNSSSTASPSKQVIVVNHDDHNHHTLPENCVALLSYSPSPYDDFRRSMQELVESK 227

Query: 229 ---VQHNA-KVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRENSNKVPARS--- 281
              +++N  K+DWDFMEE+LFCYLN+NEKKS+KFILSAFVDLI V+R+NS   PA+    
Sbjct: 228 YGKIENNQRKIDWDFMEEILFCYLNVNEKKSHKFILSAFVDLITVMRKNSEAAPAKPCSV 287

Query: 282 RNFRVARE-RRRRVRNVT 298
           R  R+ RE R+++ + VT
Sbjct: 288 RTVRIGREVRKKKTKQVT 305

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743287|emb|CBI36154.3| unnamed protein product [Vitis vinifera]

 Score =  240 bits (613), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 148/296 (50%), Positives = 199/296 (67%), Gaps = 23/296 (7%)

Query: 1   MPKHLQKSLQDYLSKIRKHTQHNIQHSS--SFPPSKEWILSGCKRPKTLSFAIARGQNNN 58
           MP+ +QKSLQDYLSK++K T H IQ S+  +   S   +L GCK PKTL           
Sbjct: 32  MPRKIQKSLQDYLSKLKKPTPH-IQLSANNALSASINRMLLGCKYPKTL----------- 79

Query: 59  IDDDNNNNNNNNNNDA-AATLSDIDRFLFENFRSLYLKDDNEDNNNNNSKKTGFEDQDDH 117
           ID D +  N+  ++   AATLSDIDRFLFENFRSLY K+D++D++++++KK     +++ 
Sbjct: 80  IDVDRDQTNSRGSDHGHAATLSDIDRFLFENFRSLYQKNDDDDDDDDDTKKR----EEEE 135

Query: 118 QASFSPSPRGVLFGSPRFVEPPPDLCGSHRFFVSPGSSGSLIEEARNSLTATSEDLGSTS 177
           +      P GVLF SPR ++P  ++C  HRFF +P SS SL+E+AR SL  +SE + S+ 
Sbjct: 136 EEEEEEKPGGVLFESPRIMDPTSNICSCHRFFTTPCSSSSLMEDARASLAVSSEGIASSY 195

Query: 178 TSTTTLNDHSSTIS-NDSNDVKLPEECIAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVD 236
            +++T     S+ S ND  +V  P +CIAVL  SP+PY DFR SMQEM+EAR+  + KVD
Sbjct: 196 ATSSTSTVDCSSSSSNDIKEVLAPHDCIAVLTNSPNPYVDFRLSMQEMIEARLHSHEKVD 255

Query: 237 WDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRENSNKVPARSRNFRVARERRR 292
           WDFME+LLFCYLNLN+K S+K+IL AFVDLI VLR+ ++KV   S N R   E RR
Sbjct: 256 WDFMEDLLFCYLNLNDKDSHKYILQAFVDLICVLRQKTDKV---SMNARGEGEWRR 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442657|ref|XP_002279759.1| PREDICTED: uncharacterized protein LOC100242914 [Vitis vinifera]

 Score =  240 bits (612), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 148/296 (50%), Positives = 199/296 (67%), Gaps = 23/296 (7%)

Query: 1   MPKHLQKSLQDYLSKIRKHTQHNIQHSS--SFPPSKEWILSGCKRPKTLSFAIARGQNNN 58
           MP+ +QKSLQDYLSK++K T H IQ S+  +   S   +L GCK PKTL           
Sbjct: 1   MPRKIQKSLQDYLSKLKKPTPH-IQLSANNALSASINRMLLGCKYPKTL----------- 48

Query: 59  IDDDNNNNNNNNNNDA-AATLSDIDRFLFENFRSLYLKDDNEDNNNNNSKKTGFEDQDDH 117
           ID D +  N+  ++   AATLSDIDRFLFENFRSLY K+D++D++++++KK     +++ 
Sbjct: 49  IDVDRDQTNSRGSDHGHAATLSDIDRFLFENFRSLYQKNDDDDDDDDDTKKR----EEEE 104

Query: 118 QASFSPSPRGVLFGSPRFVEPPPDLCGSHRFFVSPGSSGSLIEEARNSLTATSEDLGSTS 177
           +      P GVLF SPR ++P  ++C  HRFF +P SS SL+E+AR SL  +SE + S+ 
Sbjct: 105 EEEEEEKPGGVLFESPRIMDPTSNICSCHRFFTTPCSSSSLMEDARASLAVSSEGIASSY 164

Query: 178 TSTTTLNDHSSTIS-NDSNDVKLPEECIAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVD 236
            +++T     S+ S ND  +V  P +CIAVL  SP+PY DFR SMQEM+EAR+  + KVD
Sbjct: 165 ATSSTSTVDCSSSSSNDIKEVLAPHDCIAVLTNSPNPYVDFRLSMQEMIEARLHSHEKVD 224

Query: 237 WDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRENSNKVPARSRNFRVARERRR 292
           WDFME+LLFCYLNLN+K S+K+IL AFVDLI VLR+ ++KV   S N R   E RR
Sbjct: 225 WDFMEDLLFCYLNLNDKDSHKYILQAFVDLICVLRQKTDKV---SMNARGEGEWRR 277

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721810|ref|NP_001236966.1| uncharacterized protein LOC100527503 [Glycine max] gi|255632496|gb|ACU16598.1| unknown [Glycine max]

 Score =  203 bits (517), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 141/295 (47%), Positives = 176/295 (59%), Gaps = 54/295 (18%)

Query: 5   LQKSLQDYLSKIRKHTQHNIQHSSSFPPSKEWILSGCKRPKTLSFAIARGQNNNIDDDNN 64
           + K ++DYL KI K+ +  ++      PSK WILSGCK P+T SFA+  G+N +    +N
Sbjct: 1   MPKKIRDYLFKI-KNPRPQVRL-----PSKNWILSGCKHPRTPSFALYSGRNQS---HHN 51

Query: 65  NNNNNNNNDAAATLSDIDRFLFENFRSLYLKDDNEDNNNNNSKKTGFEDQDDHQASFSPS 124
              NNNNN+ AATL+D+DRFL ENF+SLYLKD+++  N+         DQ+         
Sbjct: 52  PVLNNNNNNDAATLADVDRFLMENFKSLYLKDEHDHQNH---------DQE--------- 93

Query: 125 PRGVLFGSPRFVEPPPDLCGSHRFFVSP-GSSGSLIEEARNSLTATSEDLGSTSTSTTTL 183
                      +  P DL GS RFFV P G SGSL+E+A  S  ATS          +T+
Sbjct: 94  -----------ITTPRDLPGSTRFFVKPAGFSGSLVEDAFTSDEATS---------ISTI 133

Query: 184 NDHSSTISNDSNDVKLPEECIAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEEL 243
           ND SS  SN      LP+  IA+L  S SPY+DF+RSMQEMV     H + VDWDFMEEL
Sbjct: 134 NDVSS--SNSYEKEALPDNSIALLTRSTSPYEDFKRSMQEMVN---NHESVVDWDFMEEL 188

Query: 244 LFCYLNLNEKKSYKFILSAFVDLIGVLRENSNKVPARSRNFRVARERRRRVRNVT 298
           LFCYLNLNEKKS+KFILSAFVDLI V+R NS       ++ R  R   R  RNVT
Sbjct: 189 LFCYLNLNEKKSHKFILSAFVDLITVMRRNSETPSNNPQSVRTVRS-HRGTRNVT 242

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839939|ref|XP_002887851.1| ATOFP14/OFP14 [Arabidopsis lyrata subsp. lyrata] gi|297333692|gb|EFH64110.1| ATOFP14/OFP14 [Arabidopsis lyrata subsp. lyrata]

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/312 (42%), Positives = 181/312 (58%), Gaps = 47/312 (15%)

Query: 1   MPKHLQKSLQDYLSKIRKHT-QHNIQHSSSFPPSKEWILSGCKRPKTLSFAIA-RGQNNN 58
           MP  LQKSL  YLSKI++ T +  +  S+SF  SK W+L   K PK LSF+   R +++ 
Sbjct: 1   MPNPLQKSLHGYLSKIKRETGKLQLSSSNSFSSSKNWVLG--KHPKKLSFSFKHRRRSSK 58

Query: 59  IDDDNNNNNNNNNNDAAATLSDIDRFLFENFRSLYLKDDNEDNNN-----NNSKK----- 108
                ++  +  ++  AATLSDIDRFL ENF+SL ++DD ED +      N  K+     
Sbjct: 59  TRFSKDDPVHQQDSAHAATLSDIDRFLEENFKSLCIRDDQEDEHQVRLTKNKEKRESSSD 118

Query: 109 TGFEDQDDHQASFSPSPRGVLFGSPRFVEPPPDLCGSHRFFVSPGSSGSLIEEARNSL-- 166
              +D DD++  F  +    ++ SP+    PPDL  + R    PGSS     E R S+  
Sbjct: 119 DSDDDDDDYRHRFERTWGQAVYDSPK---QPPDLLRTERLSPPPGSS-----EGRPSMET 170

Query: 167 TATSEDLGSTSTSTTTLNDHSSTISNDSNDVKLPEECIAVLKYSPSPYDDFRRSMQEMVE 226
           T+TSED  S ST                  + LPE CIAVL+Y+  P +DFR SM EM+E
Sbjct: 171 TSTSEDRQSRST------------------LVLPENCIAVLRYTDEPQEDFRLSMVEMME 212

Query: 227 ARV-QHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRENSNKVP----ARS 281
           +++   +++VDWD MEELLFCYL+LN+KKS+KFILSAFVDLI  LRE   ++      RS
Sbjct: 213 SKLGMPDSEVDWDLMEELLFCYLDLNDKKSHKFILSAFVDLIIALREKEKRITRKGLVRS 272

Query: 282 RNFRVARERRRR 293
            + R ARER R+
Sbjct: 273 LSTRAARERLRK 284

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15220029|ref|NP_178114.1| ovate family protein 14 [Arabidopsis thaliana] gi|5902362|gb|AAD55464.1|AC009322_4 Hypothetical protein [Arabidopsis thaliana] gi|12324577|gb|AAG52238.1|AC011717_6 hypothetical protein; 23631-24515 [Arabidopsis thaliana] gi|67633504|gb|AAY78676.1| ovate protein-related [Arabidopsis thaliana] gi|332198213|gb|AEE36334.1| ovate family protein 14 [Arabidopsis thaliana]

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/313 (40%), Positives = 170/313 (54%), Gaps = 46/313 (14%)

Query: 1   MPKHLQKSLQDYLSKIRKHT-QHNIQHSSSFPPSKEWILSGCKRPKTLSFAIA-RGQNNN 58
           MP  LQKSL  YLSKI+K T +  +  S SF  SK W+L   K PK LSF+   R +++ 
Sbjct: 1   MPNPLQKSLHGYLSKIKKETGKLQLSSSHSFSSSKNWVLG--KHPKKLSFSFKHRRRSSK 58

Query: 59  IDDDNNNNNNNNNNDAAATLSDIDRFLFENFRSLYLKDDNEDNNNNNSKKTGFEDQDD-- 116
                     + ++  AATLSDIDRFL ENF+SL ++DD ED+ +        E ++   
Sbjct: 59  TRFSKEEPVYHQDSAHAATLSDIDRFLEENFKSLCIRDDQEDDQHQARVTKNKEKRESSS 118

Query: 117 -----------HQASFSPSPRGVLFGSPRFVEPPPDLCGSHRFFVSPGSSGSLIEEARNS 165
                      ++  F  +    ++ SP+    PPDL  + R    PGSS     E R S
Sbjct: 119 DDSDDDDDDDDYRHRFERTWGHAVYDSPK---QPPDLLRTERLSPPPGSS-----EGRPS 170

Query: 166 LTATSEDLGSTSTSTTTLNDHSSTISNDSNDVKLPEECIAVLKYSPSPYDDFRRSMQEMV 225
           +  TS      S ST  L                PE CIAVL+Y+  P +DFR+SM EM+
Sbjct: 171 METTSTSSERQSRSTLVL----------------PENCIAVLRYTDEPQEDFRQSMVEMM 214

Query: 226 EARV-QHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRENSNKVP----AR 280
           E+++    ++VDWD MEELLFCYL+LN+KKS+KFILSAFVDLI  LRE   ++      R
Sbjct: 215 ESKLGMRESEVDWDLMEELLFCYLDLNDKKSHKFILSAFVDLIIALREKEKRITRKGHVR 274

Query: 281 SRNFRVARERRRR 293
           S + R AR+R R+
Sbjct: 275 SLSTRAARDRLRK 287

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522009|ref|XP_003529642.1| PREDICTED: uncharacterized protein LOC100777653 [Glycine max]

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/234 (38%), Positives = 125/234 (53%), Gaps = 54/234 (23%)

Query: 68  NNNNNDAAATLSDIDRFLFENFRSLYLKDDNEDNNNNNSKKTGFEDQDDHQASFSPSPRG 127
           NNN  D  A L+DIDRFLFENF+SL+L D  E +NN N            +A  SP    
Sbjct: 3   NNNVKDDEAMLADIDRFLFENFKSLFLDDREEPDNNIN-----------RRAEMSPKLDP 51

Query: 128 VLFGSPRFVEPPPDLCGSHRFFVSPGSSGSLIEEARNSLTATSEDLGSTSTSTTTLNDHS 187
           + F S            S RFF                  AT+E+ GS+S  + +     
Sbjct: 52  IRFDS------------SRRFFTD----------------ATTEE-GSSSAMSESETAEE 82

Query: 188 STISNDSNDVKLPEECIAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCY 247
           ST+        +P  C+ VL  S +P +DF+RSM+ +VEAR+++  KVDWDFM+ELLFC+
Sbjct: 83  STV--------VPGNCVVVLANSGNPSEDFQRSMEGVVEARLRNCEKVDWDFMQELLFCH 134

Query: 248 LNLNEKKSYKFILSAFVDLIGVLRENSNKVPARS------RNFRVARERRRRVR 295
           +NLN+KKS+KFILSAFV+++  +R      P +       R  R+ RE R++ +
Sbjct: 135 MNLNQKKSHKFILSAFVNVVTAMRSPPEIAPPKPTPPRSVRTVRIGREVRKKTK 188

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|14164419|dbj|BAB55818.1| hypothetical protein [Oryza sativa Japonica Group] gi|125526654|gb|EAY74768.1| hypothetical protein OsI_02660 [Oryza sativa Indica Group] gi|125571022|gb|EAZ12537.1| hypothetical protein OsJ_02438 [Oryza sativa Japonica Group]

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 125/272 (45%), Gaps = 70/272 (25%)

Query: 5   LQKSLQDYLSKIRKHTQHNIQHSSSFPP--SKEWILSGCKRPKTLSF---AIARGQNNNI 59
           L+KS+Q +LS+  K        SS+ P   +   +LS C+ P+T S        G +   
Sbjct: 12  LRKSIQLFLSRNLKKIPPIHIPSSAIPAKITSNRLLSTCRFPRTPSLHGGGGGGGDHRTT 71

Query: 60  DDDNNNNNNNNNNDAAATLSDIDRFLFENFRSLYLKDDNEDNNNNNSKKTGFEDQDDHQA 119
           DDD+ +N      D AATLSD+DRFLF+NFRSLY+                  D D+HQ 
Sbjct: 72  DDDDGSNGR----DQAATLSDVDRFLFDNFRSLYI-----------------HDGDNHQQ 110

Query: 120 SFSPSPRGVLFGSPRFVEPPPDLCGSHRFFVSPGSSGSLIEEARNSLTATSEDLGSTSTS 179
              P P    F  P   E             S   S S+ E+AR + +   +D  S++  
Sbjct: 111 RRQPPPSPGKFTQPAAAE------------TSSSRSESVAEDARGTSSGDEDDNNSST-- 156

Query: 180 TTTLNDHSSTISNDSNDVKLPEECIAVLKYSPSPYDDFRRSMQEMVEARVQHNAK---VD 236
                                    A++ +S  PY DFRRSMQ ++E  + H  +   +D
Sbjct: 157 -------------------------AIMLFSVDPYTDFRRSMQNIIE--MHHGEEPQPLD 189

Query: 237 WDFMEELLFCYLNLNEKKSYKFILSAFVDLIG 268
           WDF+EELLF YL LNE+  +K+IL AF DL  
Sbjct: 190 WDFLEELLFYYLQLNEQSVHKYILKAFADLTA 221

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
TAIR|locus:2016344	294	OFP14 "ovate family protein 14	0.842	0.853	0.385	2.6e-38
TAIR|locus:2201011	226	OFP12 "ovate family protein 12	0.244	0.323	0.426	1.4e-13
TAIR|locus:2130399	182	OFP11 "AT4G14860" [Arabidopsis	0.211	0.346	0.515	1.2e-12
TAIR|locus:2039290	261	OFP15 "ovate family protein 15	0.214	0.245	0.462	1.9e-10
TAIR|locus:2175453	260	OFP13 "ovate family protein 13	0.382	0.438	0.333	1.1e-09
TAIR|locus:2079969	282	OFP18 "ovate family protein 18	0.234	0.248	0.418	3e-09
TAIR|locus:2045472	244	OFP16 "ovate family protein 16	0.429	0.524	0.311	3.7e-08
TAIR|locus:2183209	221	OFP8 "ovate family protein 8"	0.218	0.294	0.391	1.7e-05
TAIR|locus:2176297	196	OFP10 [Arabidopsis thaliana (t	0.221	0.336	0.319	5.7e-05
TAIR|locus:2033060	315	OFP4 "ovate family protein 4"	0.204	0.193	0.415	0.00013

TAIR|locus:2016344 OFP14 "ovate family protein 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 113/293 (38%), Positives = 149/293 (50%)

Query:     1 MPKHLQKSLQDYLSKIRKHT-QHNIQHSSSFPPSKEWILSGCKRPKTLSFAIARGQXXXX 59
             MP  LQKSL  YLSKI+K T +  +  S SF  SK W+L   K PK LSF+    +    
Sbjct:     1 MPNPLQKSLHGYLSKIKKETGKLQLSSSHSFSSSKNWVLG--KHPKKLSFSFKHRRRSSK 58

Query:    60 XXXXXXXXXXXXXXA-AATLSDIDRFLFENFRSLYLKXXX------XXXXXXXSKKTGF- 111
                           A AATLSDIDRFL ENF+SL ++                 K+    
Sbjct:    59 TRFSKEEPVYHQDSAHAATLSDIDRFLEENFKSLCIRDDQEDDQHQARVTKNKEKRESSS 118

Query:   112 ------EDQDDHQASFSPSPRGVLFGSPRFVEPPPDLCGSHRFFVSPGSSGSLIEEARNS 165
                   +D DD++  F  +    ++ SP+    PPDL  + R    PGSS     E R S
Sbjct:   119 DDSDDDDDDDDYRHRFERTWGHAVYDSPK---QPPDLLRTERLSPPPGSS-----EGRPS 170

Query:   166 LTAXXXXXXXXXXXXXXXXXXXXXISNDSNDVKLPEECIAVLKYSPSPYDDFRRSMQEMV 225
             +                            + + LPE CIAVL+Y+  P +DFR+SM EM+
Sbjct:   171 METTSTSSER----------------QSRSTLVLPENCIAVLRYTDEPQEDFRQSMVEMM 214

Query:   226 EARV-QHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRENSNKV 277
             E+++    ++VDWD MEELLFCYL+LN+KKS+KFILSAFVDLI  LRE   ++
Sbjct:   215 ESKLGMRESEVDWDLMEELLFCYLDLNDKKSHKFILSAFVDLIIALREKEKRI 267

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2201011 OFP12 "ovate family protein 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
 Identities = 32/75 (42%), Positives = 48/75 (64%)

Query:   205 AVLKY--SPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSA 262
             AV  Y  SP PY+DFRRSMQEM++A         ++F+ ELL  YL+LN   ++KFI+ A
Sbjct:   151 AVKHYVQSPDPYNDFRRSMQEMIDAVTNAGDLRRYEFLHELLLSYLSLNAADTHKFIIRA 210

Query:   263 FVDLIGVLRENSNKV 277
             F D++  L  + +++
Sbjct:   211 FADILVSLLSDGHRI 225

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2130399 OFP11 "AT4G14860" [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 34/66 (51%), Positives = 48/66 (72%)

Query:   205 AVLKY--SPSPYDDFRRSMQEMVEAR-VQHNAKVDWDFMEELLFCYLNLNEKKSYKFILS 261
             A++K+  SP PY DF RSM+EMVEAR +  +   D +++ ELLFCYL LN K +++FI+S
Sbjct:   102 AIMKHIESPDPYRDFGRSMREMVEARDLTRDVVADREYLHELLFCYLYLNPKHTHRFIVS 161

Query:   262 AFVDLI 267
             AF D +
Sbjct:   162 AFADTL 167

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2039290 OFP15 "ovate family protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
 Identities = 31/67 (46%), Positives = 45/67 (67%)

Query:   210 SPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGV 269
             S  PY DF+RSM+EMVEA   H+   DW  +E+LL  +L +N K S+++I +AFVDL+  
Sbjct:   116 SDDPYSDFKRSMEEMVEAHALHH---DWKSLEKLLLQFLKVNAKTSHRYIFAAFVDLLMN 172

Query:   270 LRENSNK 276
             L  ++ K
Sbjct:   173 LALDTKK 179

GO:0009507 "chloroplast" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

TAIR|locus:2175453 OFP13 "ovate family protein 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 43/129 (33%), Positives = 63/129 (48%)

Query:   145 SHRFFVSPGSSGSLIEEARNSLTAXXXXXXXXXXXXXXXXXXXXXISNDSNDVKLPEECI 204
             S R F  PG + S++EE                            +  D +   + E  +
Sbjct:   102 SERLFFDPGVTSSILEEIEEK------------SKSDLKSKETVAVGEDRS-TPIEEISV 148

Query:   205 AVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFV 264
             AV   S  PY DFRRSM+EMV +  +  AK DW+ +E +L  YL +N +KS+  I+SAFV
Sbjct:   149 AVAMESEDPYGDFRRSMEEMVTSHGEL-AK-DWESLESMLAWYLRMNGRKSHGVIVSAFV 206

Query:   265 DLIGVLREN 273
             DL+  L ++
Sbjct:   207 DLLSGLSDS 215

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2079969 OFP18 "ovate family protein 18" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
 Identities = 31/74 (41%), Positives = 49/74 (66%)

Query:   195 NDVKLPEECIAVLKY-SPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEK 253
             +D +  E+ + +L   S  PY DF+ SM++MVE  V H+   DW  +E+LLF +L +N K
Sbjct:   127 DDHEEEEDGLMLLSLESNDPYTDFKNSMEKMVEVHVLHH---DWISLEKLLFWFLKVNVK 183

Query:   254 KSYKFILSAFVDLI 267
              S+++I +AFVDL+
Sbjct:   184 ASHRYIFAAFVDLV 197

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2045472 OFP16 "ovate family protein 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 43/138 (31%), Positives = 64/138 (46%)

Query:   145 SHRFFVS-PGSSGSLIEEAR-NSLTAXXXXXXXXXXXXXXXXXXXXXISNDSNDVKLPEE 202
             S RFF S PG S ++ +     S                         S  +   +L   
Sbjct:   102 SRRFFFSSPGRSNAITDSPEPRSREFSDNYDDATITSTKKKKKKVYDNSVTTTTTRLISG 161

Query:   203 CIAVLKY--SPSPYDDFRRSMQEMVEARVQ-----HNAKVDWDFMEELLFCYLNLNEKKS 255
               AV ++  SP P  DFRRSMQEM++A +       +    +DF++ELL  YL+LN   +
Sbjct:   162 GTAVTQHVDSPDPLTDFRRSMQEMIDAAIDAGELSRDPNDGYDFLDELLLTYLSLNPADT 221

Query:   256 YKFILSAFVD-LIGVLRE 272
             +KF++ AF D L+ +L E
Sbjct:   222 HKFVIRAFSDILVSLLSE 239

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2183209 OFP8 "ovate family protein 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 27/69 (39%), Positives = 43/69 (62%)

Query:   202 ECIAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILS 261
             E  AV+K S  PY+DFR SM EM+  R Q  A  +   +++LL C+L+LN ++ +K I+ 
Sbjct:   154 ESFAVVKKSKDPYEDFRTSMVEMIVER-QIFAPAE---LQQLLQCFLSLNSRQHHKVIVQ 209

Query:   262 AFVDLIGVL 270
              F+++   L
Sbjct:   210 VFLEIYATL 218

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2176297 OFP10 [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 5.7e-05, P = 5.7e-05
 Identities = 23/72 (31%), Positives = 47/72 (65%)

Query:   201 EECIAVLKYSPSPYDDFRRSMQEMVEAR-VQHNAKVDWDFMEELLFCYLNLNEKKSYKFI 259
             +E +A+ K S +P++D+++SM +M+E R ++  ++     ++ELL C+L++N    +  I
Sbjct:    95 DESVAMAKESINPFEDYKKSMNQMIEERYIETESE-----LKELLRCFLDINPSPQHNLI 149

Query:   260 LSAFVDLIGVLR 271
             + AFVD+   L+
Sbjct:   150 VRAFVDVCSHLQ 161

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2033060 OFP4 "ovate family protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 0.00013, P = 0.00013
 Identities = 27/65 (41%), Positives = 38/65 (58%)

Query:   202 ECIAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILS 261
             +  AV+K S  P  DFR SM EM+    ++N +   D ME+LL CYL LN K+ +  I+ 
Sbjct:   243 DSFAVIKSSIDPSKDFRESMVEMI---AENNIRTSND-MEDLLVCYLTLNPKEYHDLIIK 298

Query:   262 AFVDL 266
              FV +
Sbjct:   299 VFVQV 303

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:2000652 "regulation of secondary cell wall biogenesis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.I.9667.1 hypothetical protein (291 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	298
TIGR01568	66	TIGR01568, A_thal_3678, uncharacterized plant-spec	6e-27
pfam04844	60	pfam04844, Ovate, Transcriptional repressor, ovate	4e-22

>gnl|CDD|130631 TIGR01568, A_thal_3678, uncharacterized plant-specific domain TIGR01568

 Score = 99.7 bits (249), Expect = 6e-27
 Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 3/69 (4%)

Query: 204 IAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAF 263
           +AV K S  PY+DFRRSM+EM+E       + DW  +EELL CYL+LN KKS++FI+ AF
Sbjct: 1   VAVAKESDDPYEDFRRSMEEMIEE---RELEADWKELEELLACYLDLNPKKSHRFIVRAF 57

Query: 264 VDLIGVLRE 272
           VD++  L  
Sbjct: 58  VDILSALLS 66

This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence. Length = 66

>gnl|CDD|191110 pfam04844, Ovate, Transcriptional repressor, ovate

 Score = 86.9 bits (216), Expect = 4e-22
 Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 4/57 (7%)

Query: 210 SPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDL 266
           S  PY+DFRRSM EM+      N   DWD +EELL CYL+LN K+ ++ I++AF D+
Sbjct: 1   SSDPYEDFRRSMVEMIVE----NGIRDWDDLEELLACYLSLNAKEHHRAIVAAFADV 53

This is a family of transcriptional repressors. In plants, these proteins are important regulators of growth and development. Length = 60

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	298
TIGR01568	66	A_thal_3678 uncharacterized plant-specific domain	100.0
PF04844	59	Ovate: Transcriptional repressor, ovate; InterPro:	99.97

>TIGR01568 A_thal_3678 uncharacterized plant-specific domain TIGR01568

Probab=100.00  E-value=3.6e-33  Score=212.92  Aligned_cols=66  Identities=56%  Similarity=0.939  Sum_probs=62.1

Q ss_pred             EEEEeeCCCcHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHhc
Q 043280          204 IAVLKYSPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRE  272 (298)
Q Consensus       204 vAVvk~S~DPy~DFR~SM~EMI~~~~~~~~i~dw~dLEELL~CYLsLN~~~~H~~Iv~AF~Dl~~~L~~  272 (298)
                      |||+|+|.|||.|||+||+|||+++++   ..+|++|||||+|||+||+++||++|++||+|||++|++
T Consensus         1 vAv~k~S~DPy~DFr~SM~EMI~~~~i---~~~w~~LeeLL~cYL~LN~~~~H~~Iv~AF~dl~~~L~~   66 (66)
T TIGR01568         1 VAVAKESDDPYEDFRRSMEEMIEEREL---EADWKELEELLACYLDLNPKKSHRFIVRAFVDILSALLS   66 (66)
T ss_pred             CeeeeCCCChHHHHHHHHHHHHHHcCC---CCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHHHHHhC
Confidence            699999999999999999999999862   358999999999999999999999999999999999974

This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence.

>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length

Probab=99.97  E-value=4.5e-31  Score=197.48  Aligned_cols=59  Identities=53%  Similarity=0.820  Sum_probs=56.7

Q ss_pred             CCCcHHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHhc
Q 043280          210 SPSPYDDFRRSMQEMVEARVQHNAKVDWDFMEELLFCYLNLNEKKSYKFILSAFVDLIGVLRE  272 (298)
Q Consensus       210 S~DPy~DFR~SM~EMI~~~~~~~~i~dw~dLEELL~CYLsLN~~~~H~~Iv~AF~Dl~~~L~~  272 (298)
                      |.|||.|||+||+|||++++    +.+|++|||||+|||+||+++||++||+||+|||++|++
T Consensus         1 S~DP~~DFr~SM~EMI~~~~----i~~~~~LeeLL~cYL~LN~~~~H~~Iv~aF~dv~~~l~s   59 (59)
T PF04844_consen    1 SSDPYEDFRESMVEMIEENG----IRDWDDLEELLACYLSLNSPEHHKFIVEAFVDVWVELFS   59 (59)
T ss_pred             CCCHHHHHHHHHHHHHHHcC----CCCHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHHhC
Confidence            78999999999999999997    779999999999999999999999999999999999974

At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	298
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 5e-05
 Identities = 38/280 (13%), Positives = 83/280 (29%), Gaps = 50/280 (17%)

Query: 2   PKHLQKSLQDYLSKIRKHTQHNIQHSSSFPPSKEWILSGCKRPKTLSFAIARGQNNN--- 58
           P+ + + LQ  L +I  +      HSS+       I       + L   +      N   
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ---AELRRL---LKSKPYENCLL 248

Query: 59  IDDDNNNNNNNNNNDAAATLSDIDRFLFENF--RSLYLKDDNEDNNNNNSKKTGFEDQDD 116
           +  +  N                + F   N   + L      +  +  ++  T     D 
Sbjct: 249 VLLNVQNAK------------AWNAF---NLSCKILLTTRFKQVTDFLSAATTTHISLDH 293

Query: 117 HQASFSPSPRGVLFGS---PRFVEPPPDLCGSHRFFVSPGSSGSLIEE--AR--NSLTAT 169
           H  + +P     L       R  + P ++  ++   +S       I +  A   N     
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS--IIAESIRDGLATWDNWKHVN 351

Query: 170 SEDLGST-STSTTTLND-------HSSTISNDSNDVKLPEECIAVLKYSPSPYDDFRRSM 221
            + L +   +S   L            ++        +P   ++++ +      D    +
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP--SAHIPTILLSLI-WFDVIKSDVMVVV 408

Query: 222 QEMVEAR-VQHNAKVDWDFMEELLFCYLNLNEKKSYKFIL 260
            ++ +   V+   K   +    +   YL L  K   ++ L
Sbjct: 409 NKLHKYSLVEKQPK---ESTISIPSIYLELKVKLENEYAL 445

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00