Citrus Sinensis ID: 043305
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 892 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LF79 | 1074 | Calcium-transporting ATPa | yes | no | 0.737 | 0.612 | 0.739 | 0.0 | |
| Q9SZR1 | 1069 | Calcium-transporting ATPa | no | no | 0.735 | 0.613 | 0.724 | 0.0 | |
| Q9LU41 | 1086 | Calcium-transporting ATPa | no | no | 0.721 | 0.593 | 0.723 | 0.0 | |
| Q9LIK7 | 1017 | Putative calcium-transpor | no | no | 0.698 | 0.612 | 0.585 | 0.0 | |
| Q9LY77 | 1033 | Calcium-transporting ATPa | no | no | 0.710 | 0.613 | 0.553 | 0.0 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.670 | 0.583 | 0.518 | 1e-178 | |
| Q37145 | 1020 | Calcium-transporting ATPa | no | no | 0.658 | 0.575 | 0.526 | 1e-177 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.677 | 0.586 | 0.506 | 1e-177 | |
| O81108 | 1014 | Calcium-transporting ATPa | no | no | 0.658 | 0.578 | 0.537 | 1e-175 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 0.681 | 0.597 | 0.514 | 1e-173 |
| >sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 991 bits (2562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/667 (73%), Positives = 565/667 (84%), Gaps = 9/667 (1%)
Query: 217 ASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVV 276
S+ L + L + R+FTGHTK+ G QF GKTKV +D +K+LTVAVTIVV
Sbjct: 377 GSIGLAVAAAVLV-ILLTRYFTGHTKDNNGGPQFVKGKTKVGHVIDDVVKVLTVAVTIVV 435
Query: 277 VAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVV 336
VAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVV
Sbjct: 436 VAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVV 495
Query: 337 EAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQ 396
E+Y GG+K TD+ QL +TSL+VEGI+QNTTGS+++P GG+ E SGSPTEKAIL
Sbjct: 496 ESYAGGKK---TDT-EQLPATITSLVVEGISQNTTGSIFVPEGGGDLEYSGSPTEKAILG 551
Query: 397 WGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGY 456
WG+KLGMNFE RS+ S+LH FPFNS KKRGGVAV+ + EVH+HWKGA+EIVL SC Y
Sbjct: 552 WGVKLGMNFETARSQSSILHAFPFNSEKKRGGVAVKTADGEVHVHWKGASEIVLASCRSY 611
Query: 457 IDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDD 516
ID D + M +DK FK I DMA +LRCVA+A+RTYE E++P EELS+W LPEDD
Sbjct: 612 IDEDGNVAPMTDDKASFFKNGINDMAGRTLRCVALAFRTYEAEKVPTGEELSKWVLPEDD 671
Query: 517 LVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATE 576
L+LLAIVGIKDPCRP VKD++ LC+ AGVKVRMVTGDN+QTARAIALECGIL+S+AD +E
Sbjct: 672 LILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIALECGILSSDADLSE 731
Query: 577 PNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGT 636
P +IEGKSFR +++ +R++I+ + I VMGRSSP+DKLLLVQ+LR++G VVAVTGDGT
Sbjct: 732 PTLIEGKSFREMTDAERDKISDK----ISVMGRSSPNDKLLLVQSLRRQGHVVAVTGDGT 787
Query: 637 NDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQ 696
NDAPALHEADIGLAMGI GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQ
Sbjct: 788 NDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQ 847
Query: 697 LTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGR 756
LTVNVAALVIN VAA+SSGDVPL AVQLLWVNLIMDTLGALALATEPPTDHLM R PVGR
Sbjct: 848 LTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGR 907
Query: 757 REPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLC 816
+EPLITNIMWRNLLIQA YQVSVLL LNF+G IL LE + + H+ +VKNT+IFN+FVLC
Sbjct: 908 KEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFVLC 967
Query: 817 QIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWII 876
Q FNEFNARKPDEKNIF G+ KNRLFMGI+ +TLVLQ++I++FLGKFASTT+LNWK W+I
Sbjct: 968 QAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVIIVEFLGKFASTTKLNWKQWLI 1027
Query: 877 SVVIGFI 883
V IG I
Sbjct: 1028 CVGIGVI 1034
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q9SZR1|ACA10_ARATH Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/668 (72%), Positives = 566/668 (84%), Gaps = 12/668 (1%)
Query: 221 LGIKTEYLAGVRF----VRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVV 276
+GI +AGV VR+FTGHTKN G QF GKTK +D ++I TVAVTIVV
Sbjct: 376 IGIVGLTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKTKFEHVLDDLVEIFTVAVTIVV 435
Query: 277 VAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVV 336
VAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLN+MTVV
Sbjct: 436 VAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVV 495
Query: 337 EAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQ 396
E Y G +KM+ DS+S+L TS+LVEGIA NTTGSV+ +G E +VSGSPTE+AIL
Sbjct: 496 ECYAGLQKMDSPDSSSKLPSAFTSILVEGIAHNTTGSVFRSESG-EIQVSGSPTERAILN 554
Query: 397 WGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGY 456
W +KLGM+F+A++SE S + FPFNS KKRGGVAV+ P+S VHIHWKGAAEIVL SCT Y
Sbjct: 555 WAIKLGMDFDALKSESSAVQFFPFNSEKKRGGVAVKSPDSSVHIHWKGAAEIVLGSCTHY 614
Query: 457 IDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIP-DEEELSRWALPED 515
+D + V M EDK+ K AI+DMA+ SLRCVAIA+RT+E ++IP DEE+LSRW LPED
Sbjct: 615 MDESESFVDMSEDKMGGLKDAIDDMAARSLRCVAIAFRTFEADKIPTDEEQLSRWELPED 674
Query: 516 DLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADAT 575
DL+LLAIVGIKDPCRP VK+++ LC+ AGVKVRMVTGDNIQTA+AIALECGIL S++DA+
Sbjct: 675 DLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIALECGILASDSDAS 734
Query: 576 EPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDG 635
EPN+IEGK FR+ SE +R+ I E I VMGRSSP+DKLLLVQ+L++RG VVAVTGDG
Sbjct: 735 EPNLIEGKVFRSYSEEERDRICEE----ISVMGRSSPNDKLLLVQSLKRRGHVVAVTGDG 790
Query: 636 TNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQF 695
TNDAPALHEADIGLAMGIQGTEVAKE SDIIILDDNF SVVKVVRWGRSVYANIQKFIQF
Sbjct: 791 TNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVYANIQKFIQF 850
Query: 696 QLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVG 755
QLTVNVAALVIN VAA+S+G+VPL AVQLLWVNLIMDTLGALALATEPPTDHLM R+PVG
Sbjct: 851 QLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMDRAPVG 910
Query: 756 RREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVL 815
RREPLITNIMWRNL IQA YQV+VLL+LNF+G IL+L+S NA +VKNT+IFN+FV+
Sbjct: 911 RREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKSKPNAE--RVKNTVIFNAFVI 968
Query: 816 CQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWI 875
CQ+FNEFNARKPDE NIF G+ +N LF+GI+++T+VLQ++I++FLG FASTT+L+W+ W+
Sbjct: 969 CQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVVIVEFLGTFASTTKLDWEMWL 1028
Query: 876 ISVVIGFI 883
+ + IG I
Sbjct: 1029 VCIGIGSI 1036
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LU41|ACA9_ARATH Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/650 (72%), Positives = 547/650 (84%), Gaps = 6/650 (0%)
Query: 235 RFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYS 294
R+FTG T++ G QF G T +SD VD +KI T+AVTIVVVAVPEGLPLAVTLTLAYS
Sbjct: 407 RYFTGTTQDTNGATQFIKGTTSISDIVDDCVKIFTIAVTIVVVAVPEGLPLAVTLTLAYS 466
Query: 295 MRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQL 354
MRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVE Y GG KM+ D+ S L
Sbjct: 467 MRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVETYAGGSKMDVADNPSGL 526
Query: 355 SPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSV 414
P + +L+ EG+AQNTTG+++ P +GGE E+SGSPTEKAIL W KLGM F+ +RSE ++
Sbjct: 527 HPKLVALISEGVAQNTTGNIFHPKDGGEVEISGSPTEKAILSWAYKLGMKFDTIRSESAI 586
Query: 415 LHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTF 474
+H FPFNS KKRGGVAV +SEV IHWKGAAEIVL CT Y+D++ L ++ K F
Sbjct: 587 IHAFPFNSEKKRGGVAVLRGDSEVFIHWKGAAEIVLACCTQYMDSNGTLQSIESQKEF-F 645
Query: 475 KKAIEDMASSSLRCVAIAYRTYERERIPDEEE-LSRWALPEDDLVLLAIVGIKDPCRPSV 533
+ AI+ MA +SLRCVAIA RT E ++P E+E L +WALPED+L+LLAIVGIKDPCRP V
Sbjct: 646 RVAIDSMAKNSLRCVAIACRTQELNQVPKEQEDLDKWALPEDELILLAIVGIKDPCRPGV 705
Query: 534 KDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQR 593
++A+R+C AGVKVRMVTGDN+QTA+AIALECGIL+S+ +A EP IIEGK FR LSE +R
Sbjct: 706 REAVRICTSAGVKVRMVTGDNLQTAKAIALECGILSSDTEAVEPTIIEGKVFRELSEKER 765
Query: 594 EEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGI 653
E++A + I VMGRSSP+DKLLLVQALRK GDVVAVTGDGTNDAPALHEADIGL+MGI
Sbjct: 766 EQVAKK----ITVMGRSSPNDKLLLVQALRKNGDVVAVTGDGTNDAPALHEADIGLSMGI 821
Query: 654 QGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVS 713
GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAAL+IN VAA+S
Sbjct: 822 SGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAMS 881
Query: 714 SGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQA 773
SGDVPL AVQLLWVNLIMDTLGALALATEPPTDHLM R+PVGRREPLITNIMWRNLL+Q+
Sbjct: 882 SGDVPLKAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLLVQS 941
Query: 774 SYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIF 833
YQV+VLLVLNF G IL L +++AH+ +VKNT+IFN+FV+CQIFNEFNARKPDE N+F
Sbjct: 942 FYQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTMIFNAFVMCQIFNEFNARKPDEMNVF 1001
Query: 834 GGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFI 883
G+ KN LF+ IV VT +LQI+I+ FLGKFA T RL W+ W+ S++IG +
Sbjct: 1002 RGVNKNPLFVAIVGVTFILQIIIVTFLGKFAHTVRLGWQLWLASIIIGLV 1051
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/651 (58%), Positives = 475/651 (72%), Gaps = 28/651 (4%)
Query: 234 VRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAY 293
+R+FTG TK+ G ++ TK + V+ +K++ AVTI+VVA+PEGLPLAVTLTLAY
Sbjct: 360 IRYFTGTTKDESGNREYNGKTTKSDEIVNAVVKMVAAAVTIIVVAIPEGLPLAVTLTLAY 419
Query: 294 SMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQ 353
SM++MM D A+VR+LSACETMGSAT IC+DKTGTLTLNQM V + + G + S
Sbjct: 420 SMKRMMKDNAMVRKLSACETMGSATVICTDKTGTLTLNQMKVTDFWFGLE----SGKASS 475
Query: 354 LSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMK-LGMNFEAVRSEC 412
+S V L +G+A NTTGSV+ G E E SGSPTEKAIL W ++ L M E V E
Sbjct: 476 VSQRVVELFHQGVAMNTTGSVFKAKAGTEYEFSGSPTEKAILSWAVEELEMGMEKVIEEH 535
Query: 413 SVLHVFPFNSLKKRGGVAVQLP--NSEVHI-HWKGAAEIVLDSCTGYIDTDDRLVQMDED 469
V+HV FNS KKR GV ++ N+E ++ HWKGAAE +L C+ + D + +M ED
Sbjct: 536 DVVHVEGFNSEKKRSGVLMKKKGVNTENNVVHWKGAAEKILAMCSTFCDGSGVVREMKED 595
Query: 470 KLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPC 529
+ F+K I+ MA+ SLRC+A AY D E+ + L E+ L LL I+GIKDPC
Sbjct: 596 DKIQFEKIIQSMAAKSLRCIAFAYS-------EDNEDNKK--LKEEKLSLLGIIGIKDPC 646
Query: 530 RPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALS 589
RP VK A+ C+ AGV ++M+TGDNI TARAIA+ECGILT E + ++EG+ FR +
Sbjct: 647 RPGVKKAVEDCQFAGVNIKMITGDNIFTARAIAVECGILTPEDEMNSEAVLEGEKFRNYT 706
Query: 590 ETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL 649
+ +R E I VM RSSP DKLL+V+ L++ G VVAVTGDGTNDAPAL EADIGL
Sbjct: 707 QEERLE----KVERIKVMARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAPALKEADIGL 762
Query: 650 AMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFV 709
+MGIQGTEVAKESSDI+ILDDNFASV V++WGR VY NIQKFIQFQLTVNVAALVINFV
Sbjct: 763 SMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFV 822
Query: 710 AAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNL 769
AAVS+GDVPL AVQLLWVNLIMDTLGALALATE PT+ LM++ P+GR PLITNIMWRNL
Sbjct: 823 AAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPTNDLMKKKPIGRVAPLITNIMWRNL 882
Query: 770 LIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDE 829
L QA YQ+SVLLVL F+G+ I N+ + KVKNTLIFN+FVLCQ+FNEFNAR ++
Sbjct: 883 LAQAFYQISVLLVLQFRGRSIFNV-------TEKVKNTLIFNTFVLCQVFNEFNARSLEK 935
Query: 830 KNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVI 880
KN+F G+ KNRLF+GI+ VT+VLQ+++++FL +FA T RLN W + + I
Sbjct: 936 KNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLGQWGVCIAI 986
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LY77|ACA12_ARATH Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/670 (55%), Positives = 482/670 (71%), Gaps = 36/670 (5%)
Query: 235 RFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYS 294
R+FTG+T+ G ++ KT V V+ ++I+ AVTIVVVA+PEGLPLAVTLTLAYS
Sbjct: 366 RYFTGNTEKE-GKREYNGSKTPVDTVVNSVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYS 424
Query: 295 MRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQL 354
M++MM+D+A+VR+LSACETMGSAT IC+DKTGTLTLN+M V + ++G ++ DS +
Sbjct: 425 MKRMMSDQAMVRKLSACETMGSATVICTDKTGTLTLNEMKVTKFWLGQESIHE-DSTKMI 483
Query: 355 SPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWG-MKLGMNFEAVRSECS 413
SP V LL +G NTTGSV + +G E SGSPTEKA+L W + LGM+ E+V+ +
Sbjct: 484 SPDVLDLLYQGTGLNTTGSVCVSDSGSTPEFSGSPTEKALLSWTVLNLGMDMESVKQKHE 543
Query: 414 VLHVFPFNSLKKRGGVAVQL-PNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLL 472
VL V F+S KKR GV V+ ++ VH+HWKGAAE+VL C+ Y + + MD
Sbjct: 544 VLRVETFSSAKKRSGVLVRRKSDNTVHVHWKGAAEMVLAMCSHYYTSTGSVDLMDSTAKS 603
Query: 473 TFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPS 532
+ I+ MA+SSLRC+A A++ + + L ED L L+ IVG+KDPCRP
Sbjct: 604 RIQAIIQGMAASSLRCIAFAHKIASNDSV----------LEEDGLTLMGIVGLKDPCRPG 653
Query: 533 VKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQ 592
V A+ C++AGV ++M+TGDN+ TA+AIA ECGIL E ++EG FR ++ +
Sbjct: 654 VSKAVETCKLAGVTIKMITGDNVFTAKAIAFECGILDHNDKDEEDAVVEGVQFRNYTDEE 713
Query: 593 REEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMG 652
R + + I VM RSSPSDKLL+V+ LR +G VVAVTGDGTNDAPAL EADIGL+MG
Sbjct: 714 RMQKVDK----IRVMARSSPSDKLLMVKCLRLKGHVVAVTGDGTNDAPALKEADIGLSMG 769
Query: 653 IQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAV 712
IQGTEVAKESSDI+ILDDNFASV V++WGR VY NIQKFIQFQLTVNVAALVINF+AA+
Sbjct: 770 IQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAI 829
Query: 713 SSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQ 772
S+G+VPL AVQLLWVNLIMDTLGALALATE PT+ L++R PVGR E LITN+MWRNLL+Q
Sbjct: 830 SAGEVPLTAVQLLWVNLIMDTLGALALATERPTNELLKRKPVGRTEALITNVMWRNLLVQ 889
Query: 773 ASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNI 832
+ YQ++VLL+L F+G I ++ + VK+TLIFN+FVLCQ+FNEFNAR+ ++KN+
Sbjct: 890 SLYQIAVLLILQFKGMSIFSVRKE-------VKDTLIFNTFVLCQVFNEFNAREMEKKNV 942
Query: 833 FGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLN-WK----------HWIISVVIG 881
F G+ +NRLF+GI+A+T+VLQ+++++FL KFA T RLN W+ W I
Sbjct: 943 FKGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGWQWGTCIALASLSWPIGFFTK 1002
Query: 882 FIRLFEHPVL 891
FI + E P L
Sbjct: 1003 FIPVSETPFL 1012
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 626 bits (1614), Expect = e-178, Method: Compositional matrix adjust.
Identities = 322/621 (51%), Positives = 430/621 (69%), Gaps = 23/621 (3%)
Query: 268 LTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGT 327
+AVTI+VVAVPEGLPLAVTL+LA++M+++M+D+ALVR L+ACETMGS+T IC+DKTGT
Sbjct: 396 FAIAVTIIVVAVPEGLPLAVTLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGT 455
Query: 328 LTLNQMTVVEAYVGGRKMNPTDSNSQL--SPMVTSLLVEGIAQNTTGSVYLPPNGGEAEV 385
LT N M V + ++ + N QL S V ++L++ I QNT GS + G+ ++
Sbjct: 456 LTTNHMVVNKVWICENIKERQEENFQLNLSEQVKNILIQAIFQNT-GSEVVKDKEGKTQI 514
Query: 386 SGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGA 445
GSPTE+AIL++G+ LG + + R E +L + PFNS KK+ V +V KGA
Sbjct: 515 LGSPTERAILEFGLLLGGDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGA 574
Query: 446 AEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEE 505
+EIVL C +D++ V + E+K+ + IE AS +LR + + Y D +
Sbjct: 575 SEIVLKMCEKVVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVY--------TDLD 626
Query: 506 ELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALEC 565
E R LP L+A+VGIKDP RP V++A++ C+ AG+ VRMVTGDNI TA+AIA EC
Sbjct: 627 EAPRGDLPNGGYTLVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKEC 686
Query: 566 GILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKR 625
GILT+ A IEG FR L + I I VM RS P DK LV LRK
Sbjct: 687 GILTAGGVA-----IEGSDFRNLPPHEMRAI----LPKIQVMARSLPLDKHTLVNNLRKM 737
Query: 626 GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSV 685
G+VVAVTGDGTNDAPALHEADIGLAMGI GTEVAKE++D+II+DDNFA++V V +WGR+V
Sbjct: 738 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAV 797
Query: 686 YANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPT 745
Y NIQKF+QFQLTVNV AL+INFV+A +G PL AVQLLWVN+IMDTLGALALATEPP
Sbjct: 798 YINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPN 857
Query: 746 DHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVK 805
+ LM+R P+GR IT MWRN++ Q+ YQ+ VL +LNF GK+ILNL + S V
Sbjct: 858 EGLMKRQPIGRTASFITRAMWRNIIGQSIYQLIVLGILNFAGKQILNL---NGPDSTIVL 914
Query: 806 NTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFAS 865
NT+IFNSFV CQ+FNE N+R+ ++ N+F G+ K+ +F+ ++ T+ Q++I++FLG FAS
Sbjct: 915 NTIIFNSFVFCQVFNEVNSREIEKINVFEGMFKSWVFVAVMTATVGFQVIIVEFLGAFAS 974
Query: 866 TTRLNWKHWIISVVIGFIRLF 886
T L+W+HW++ ++IG + +
Sbjct: 975 TVPLSWQHWLLCILIGSVSMI 995
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 623 bits (1606), Expect = e-177, Method: Compositional matrix adjust.
Identities = 323/613 (52%), Positives = 432/613 (70%), Gaps = 26/613 (4%)
Query: 280 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAY 339
PEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSATTICSDKTGTLT N MTVV+A
Sbjct: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKAC 472
Query: 340 VG--GRKMNPTDSNSQLSPMV----TSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKA 393
+ +++N D+ + + + LL++ I NT G + + G + E+ G+PTE A
Sbjct: 473 ICEQAKEVNGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVG-KGNKTEILGTPTETA 531
Query: 394 ILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSC 453
+L++G+ LG +F+ VR +V+ V PFNS KKR GV ++LP H KGA+EIVLDSC
Sbjct: 532 LLEFGLSLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSC 591
Query: 454 TGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALP 513
YI+ D +V +DE K IE+ AS +LR + +AY +E I DE L +P
Sbjct: 592 DKYINKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAY--FE---IGDEFSLEA-PIP 645
Query: 514 EDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD 573
+ IVGIKDP RP VK+++ +C+ AG+ VRMVTGDN+ TA+AIA ECGILT +
Sbjct: 646 SGGYTCIGIVGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGI 705
Query: 574 ATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKR-GDVVAVT 632
A IEG FR S+ + ++ + + VM RSSP DK LV+ LR +VVAVT
Sbjct: 706 A-----IEGPEFREKSDEELLKLIPK----LQVMARSSPMDKHTLVRLLRTMFQEVVAVT 756
Query: 633 GDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKF 692
GDGTNDAPALHEADIGLAMGI GTEVAKES+D+IILDDNF+++V V +WGRSVY NIQKF
Sbjct: 757 GDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKF 816
Query: 693 IQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRS 752
+QFQLTVNV AL++NF++A +G+ PL AVQLLWVN+IMDTLGALALATEPP D LM+RS
Sbjct: 817 VQFQLTVNVVALIVNFLSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRS 876
Query: 753 PVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNS 812
PVGR+ I+N+MWRN+L Q+ YQ+ ++ L +GK + L+ S+ NTLIFN
Sbjct: 877 PVGRKGNFISNVMWRNILGQSLYQLVIIWCLQTKGKTMFGLD---GPDSDLTLNTLIFNI 933
Query: 813 FVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWK 872
FV CQ+FNE ++R+ ++ ++F GI KN +F+ ++ T+V Q++II+ LG FA TT LN
Sbjct: 934 FVFCQVFNEISSREMEKIDVFKGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTPLNLG 993
Query: 873 HWIISVVIGFIRL 885
W++S+++GF+ +
Sbjct: 994 QWLVSIILGFLGM 1006
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 621 bits (1601), Expect = e-177, Method: Compositional matrix adjust.
Identities = 319/630 (50%), Positives = 431/630 (68%), Gaps = 26/630 (4%)
Query: 268 LTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGT 327
++VTI+VVAVPEGLPLAVTL+LA++M+K+M+D+ALVR L+ACETMGS+T IC+DKTGT
Sbjct: 396 FAISVTIIVVAVPEGLPLAVTLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGT 455
Query: 328 LTLNQMTVVEAYVGGRKMNPTDSNSQLSPM-----VTSLLVEGIAQNTTGSVYLPPNGGE 382
LT N M V + ++ + + + + + V S L++GI QNT GS + G
Sbjct: 456 LTTNHMVVNKVWICDKVQERQEGSKESFELELSEEVQSTLLQGIFQNT-GSEVVKDKDGN 514
Query: 383 AEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHW 442
++ GSPTE+AIL++G+ LG +F R E +L + PFNS KK+ V + LP
Sbjct: 515 TQILGSPTERAILEFGLLLGGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFC 574
Query: 443 KGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIP 502
KGA+EIVL C +D++ V + E+++ + IE AS +LR + + Y+
Sbjct: 575 KGASEIVLKMCENVVDSNGESVPLTEERITSISDIIEGFASEALRTLCLVYK-------- 626
Query: 503 DEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIA 562
D +E LP+ ++A+VGIKDP RP V++A++ C+ AG+ VRMVTGDNI TA+AIA
Sbjct: 627 DLDEAPSGELPDGGYTMVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIA 686
Query: 563 LECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQAL 622
ECGI T A IEG FR LS + I + I VM RS P DK LV L
Sbjct: 687 KECGIYTEGGLA-----IEGSEFRDLSPHEMRAIIPK----IQVMARSLPLDKHTLVSNL 737
Query: 623 RKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWG 682
RK G+VVAVTGDGTNDAPALHEADIGLAMGI GTEVAKE++D+II+DDNF ++V V RWG
Sbjct: 738 RKIGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWG 797
Query: 683 RSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATE 742
R+VY NIQKF+QFQLTVNV AL+INFV+A +G PL AVQLLWVN+IMDTLGALALATE
Sbjct: 798 RAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATE 857
Query: 743 PPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSN 802
PP + LM+R+P+ R IT MWRN+ Q+ YQ+ VL +LNF GK +L L+ S
Sbjct: 858 PPNEGLMKRAPIARTASFITKTMWRNIAGQSVYQLIVLGILNFAGKSLLKLD---GPDST 914
Query: 803 KVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGK 862
V NT+IFNSFV CQ+FNE N+R+ ++ N+F G+ + +F ++ VT+V Q++I++FLG
Sbjct: 915 AVLNTVIFNSFVFCQVFNEINSREIEKINVFKGMFNSWVFTWVMTVTVVFQVIIVEFLGA 974
Query: 863 FASTTRLNWKHWIISVVIGFIRLFEHPVLQ 892
FAST L+W+HW++S++IG + + +L+
Sbjct: 975 FASTVPLSWQHWLLSILIGSLNMIVAVILK 1004
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 616 bits (1588), Expect = e-175, Method: Compositional matrix adjust.
Identities = 329/612 (53%), Positives = 416/612 (67%), Gaps = 25/612 (4%)
Query: 280 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAY 339
PEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSATTICSDKTGTLT N MTVV++
Sbjct: 411 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSC 470
Query: 340 VGGRKMNPTDSNSQLSPMV----TSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAIL 395
+ + + S L + LL++ I NT G V + +G + E+ G+PTE AIL
Sbjct: 471 ICMNVQDVANKGSSLQSEIPESAVKLLIQSIFNNTGGEVVVNKHG-KTELLGTPTETAIL 529
Query: 396 QWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLP-NSEVHIHWKGAAEIVLDSCT 454
+ G+ LG F+ R V+ V PFNS KKR GV ++LP + H KGA+EIVL +C
Sbjct: 530 ELGLSLGGKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACD 589
Query: 455 GYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPE 514
+++ +V +DE+ + I + A+ +LR + +AY E PD+ A+P
Sbjct: 590 KVVNSSGEVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDD------AIPA 643
Query: 515 DDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADA 574
+ IVGIKDP RP VK+++ LCR AG+ VRMVTGDNI TA+AIA ECGILT + A
Sbjct: 644 SGFTCVGIVGIKDPVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIA 703
Query: 575 TEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGD-VVAVTG 633
IEG FR E +EE+ E I VM RSSP DK LV+ LR D VVAVTG
Sbjct: 704 -----IEGPVFR---EKNQEELL-ELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTG 754
Query: 634 DGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFI 693
DGTNDAPALHEADIGLAMGI GTEVAKES+D+IILDDNF+++V V +WGRSVY NIQKF+
Sbjct: 755 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFV 814
Query: 694 QFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSP 753
QFQLTVNV ALV+NF +A +G PL AVQLLWVN+IMDTLGALALATEPP D LM+R P
Sbjct: 815 QFQLTVNVVALVVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLP 874
Query: 754 VGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSF 813
VGRR ITN MWRN+L QA YQ V+ +L +GK + L+ S + NTLIFN F
Sbjct: 875 VGRRGNFITNAMWRNILGQAVYQFIVIWILQAKGKAMFGLD---GPDSTLMLNTLIFNCF 931
Query: 814 VLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKH 873
V CQ+FNE ++R+ +E ++F GI N +F+ ++ T+ QI+II+FLG FASTT L
Sbjct: 932 VFCQVFNEISSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTITQ 991
Query: 874 WIISVVIGFIRL 885
WI S+ IGF+ +
Sbjct: 992 WIFSIFIGFLGM 1003
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 609 bits (1570), Expect = e-173, Method: Compositional matrix adjust.
Identities = 327/636 (51%), Positives = 426/636 (66%), Gaps = 28/636 (4%)
Query: 265 IKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDK 324
+ AVTI+VVAVPEGLPLAVTL+LA++M+K+M DKALVR LSACETMGSA TIC+DK
Sbjct: 376 VNYFATAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDK 435
Query: 325 TGTLTLNQMTVVEAYVGGRKMNPTDS------NSQLSPMVTSLLVEGIAQNTTGSVYLPP 378
TGTLT N M V + ++ + T + NS +S SLL++GI +NT+ V +
Sbjct: 436 TGTLTTNYMVVDKIWISEVSKSVTSNTISGELNSVVSSRTLSLLLQGIFENTSAEV-VKE 494
Query: 379 NGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEV 438
G+ V G+PTE+AIL++G+ L +A S C+ + V PFNS+KK+ V + LP+
Sbjct: 495 KDGKQTVLGTPTERAILEFGLGLEGVHDAEYSACTKVKVEPFNSVKKKMAVLISLPSGTS 554
Query: 439 HIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYER 498
KGA+EI+L C +D D + + E + I AS +LR + +AY+ +
Sbjct: 555 RWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNILDTINSFASDALRTLCLAYKEVDD 614
Query: 499 ERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTA 558
+ + + P L+AI GIKDP RP VKDA++ C AG+ VRMVTGDNI TA
Sbjct: 615 DIDDNADS------PTSGFTLIAIFGIKDPVRPGVKDAVKTCMSAGITVRMVTGDNINTA 668
Query: 559 RAIALECGILTSEADATEPNIIEGKSFRALS-ETQREEIAGEDFGMICVMGRSSPSDKLL 617
+AIA ECGILT + A IEG F + S E R+ I I VM RS P DK
Sbjct: 669 KAIAKECGILTEDGVA-----IEGPEFHSKSPEEMRDLIPN-----IQVMARSLPLDKHT 718
Query: 618 LVQALRKRGD-VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVV 676
LV LR D VV+VTGDGTNDAPALHEADIGLAMGI GTEVAKES+D+I+LDDNF +++
Sbjct: 719 LVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIVLDDNFTTII 778
Query: 677 KVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGA 736
V RWGR+VY NIQKF+QFQLTVN+ ALVINFV+A +G PL AVQLLWVN+IMDTLGA
Sbjct: 779 NVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNMIMDTLGA 838
Query: 737 LALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESD 796
LALATEPP D +M+R PV + E IT +MWRN++ Q+ YQ+ VL L F G+ +LN++
Sbjct: 839 LALATEPPNDEMMKRPPVRKGESFITKVMWRNIMGQSLYQLFVLGALMFGGESLLNIK-- 896
Query: 797 SNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILI 856
A S + NTLIFNSFV CQ+FNE N+R+ + N+F GI N +F+ ++A T+ Q++I
Sbjct: 897 -GADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWIFIAVIAATVAFQVVI 955
Query: 857 IQFLGKFASTTRLNWKHWIISVVIGFIRLFEHPVLQ 892
I+FLG FAST LNW+HW++SV +G I L +L+
Sbjct: 956 IEFLGTFASTVPLNWQHWLLSVGLGSISLIVGVILK 991
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 892 | ||||||
| 255554448 | 1075 | cation-transporting atpase plant, putati | 0.727 | 0.603 | 0.799 | 0.0 | |
| 356530348 | 1085 | PREDICTED: calcium-transporting ATPase 8 | 0.726 | 0.597 | 0.786 | 0.0 | |
| 224144297 | 1062 | autoinhibited calcium ATPase [Populus tr | 0.723 | 0.607 | 0.773 | 0.0 | |
| 449465342 | 1076 | PREDICTED: calcium-transporting ATPase 1 | 0.715 | 0.592 | 0.787 | 0.0 | |
| 449521431 | 888 | PREDICTED: calcium-transporting ATPase 8 | 0.715 | 0.718 | 0.787 | 0.0 | |
| 297735450 | 1080 | unnamed protein product [Vitis vinifera] | 0.723 | 0.597 | 0.784 | 0.0 | |
| 359485123 | 1078 | PREDICTED: calcium-transporting ATPase 1 | 0.723 | 0.598 | 0.784 | 0.0 | |
| 350539882 | 1081 | auto-inhibited Ca2 -transporting ATPase | 0.726 | 0.599 | 0.758 | 0.0 | |
| 8843813 | 1099 | Ca2+-transporting ATPase-like protein [A | 0.737 | 0.598 | 0.720 | 0.0 | |
| 356547482 | 1092 | PREDICTED: calcium-transporting ATPase 9 | 0.721 | 0.589 | 0.758 | 0.0 |
| >gi|255554448|ref|XP_002518263.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223542610|gb|EEF44149.1| cation-transporting atpase plant, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1059 bits (2739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/654 (79%), Positives = 590/654 (90%), Gaps = 5/654 (0%)
Query: 231 VRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLT 290
V VRFFTGHTKNA G+ QF AGKT V DAVDGAIKILTVAVTIVVVAVPEGLPLAVTLT
Sbjct: 390 VLIVRFFTGHTKNADGSRQFTAGKTSVGDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLT 449
Query: 291 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS 350
LAYSMRKMMADKALVRRL+ACETMGSATTICSDKTGTLTLNQMTVV+AYVGG+K++P D+
Sbjct: 450 LAYSMRKMMADKALVRRLAACETMGSATTICSDKTGTLTLNQMTVVDAYVGGKKIDPPDN 509
Query: 351 NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRS 410
SQLSP + SLL+EG++QNT GSV++P +GGE EVSGSPTEKAIL WG+KLGMNF+A RS
Sbjct: 510 KSQLSPNLFSLLIEGVSQNTNGSVFIPEDGGETEVSGSPTEKAILVWGVKLGMNFQAARS 569
Query: 411 ECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDK 470
E +++HVFPFNS KKRGGVA+QLP+SEVHIHWKGAAEIVL SCT Y+D +D+LV +D++K
Sbjct: 570 ESTIIHVFPFNSQKKRGGVALQLPDSEVHIHWKGAAEIVLASCTTYMDGNDQLVPLDDEK 629
Query: 471 LLTFKKAIEDMASSSLRCVAIAYRTYERERIP-DEEELSRWALPEDDLVLLAIVGIKDPC 529
L FKK+IEDMA+ SLRC+AIAYR YE ++IP +E++L++W LPED+LVLLAIVG+KDPC
Sbjct: 630 ALFFKKSIEDMAAHSLRCIAIAYRPYEMDKIPVNEQDLTQWQLPEDNLVLLAIVGLKDPC 689
Query: 530 RPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALS 589
RP VK+A++LC+ AGVKVRMVTGDNIQTARAIALECGIL S+ DA EP +IEGK FRA S
Sbjct: 690 RPGVKEAVQLCQDAGVKVRMVTGDNIQTARAIALECGILGSDEDAVEPILIEGKVFRAYS 749
Query: 590 ETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL 649
+ +RE++A I VMGRSSP+DKLLLVQALRKR VVAVTGDGTNDAPALHEADIGL
Sbjct: 750 DEEREKVAER----ISVMGRSSPNDKLLLVQALRKRKHVVAVTGDGTNDAPALHEADIGL 805
Query: 650 AMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFV 709
+MGIQGTEVAKE+SDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAAL+IN V
Sbjct: 806 SMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVV 865
Query: 710 AAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNL 769
AAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLM R PVGRREPLITNIMWRNL
Sbjct: 866 AAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRPPVGRREPLITNIMWRNL 925
Query: 770 LIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDE 829
LIQA+YQV VLLVLNF GK +L L++D H+NKVK+TLIFN+FVLCQIFNEFNARKPDE
Sbjct: 926 LIQAAYQVIVLLVLNFHGKSLLGLKNDDPEHANKVKDTLIFNAFVLCQIFNEFNARKPDE 985
Query: 830 KNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFI 883
N+F GITKN LFMGIVAVTLVLQ++II+F+GKF ST RLNWK W+IS+VI FI
Sbjct: 986 LNVFDGITKNHLFMGIVAVTLVLQVIIIEFIGKFTSTVRLNWKQWVISLVIAFI 1039
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356530348|ref|XP_003533744.1| PREDICTED: calcium-transporting ATPase 8, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/655 (78%), Positives = 577/655 (88%), Gaps = 7/655 (1%)
Query: 231 VRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLT 290
V R+F+GHTKN G++QF AGKTKV DA+DGAIKI+TVAVTIVVVAVPEGLPLAVTLT
Sbjct: 400 VLLARYFSGHTKNPDGSVQFTAGKTKVGDAIDGAIKIITVAVTIVVVAVPEGLPLAVTLT 459
Query: 291 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS 350
LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLT+NQMTVVEAY GG+K++P
Sbjct: 460 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYAGGKKIDPP-H 518
Query: 351 NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGG-EAEVSGSPTEKAILQWGMKLGMNFEAVR 409
+ PM+ SLL+EG+AQNT GSVY P + EVSGSPTEKAILQWG+++GMNF A R
Sbjct: 519 KLESYPMLRSLLIEGVAQNTNGSVYAPEGAANDVEVSGSPTEKAILQWGIQIGMNFTAAR 578
Query: 410 SECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDED 469
SE S++HVFPFNS KKRGGVA+Q +S +HIHWKGAAEIVL CTGY+D +D+LV MDE+
Sbjct: 579 SESSIIHVFPFNSEKKRGGVAIQTADSNIHIHWKGAAEIVLACCTGYVDVNDQLVGMDEE 638
Query: 470 KLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEEL-SRWALPEDDLVLLAIVGIKDP 528
K+ FKKAIEDMA+ SLRCVAIAYR+YE+E++P EEL S+W+LPEDDL+LLAIVG+KDP
Sbjct: 639 KMTFFKKAIEDMAADSLRCVAIAYRSYEKEKVPTNEELLSQWSLPEDDLILLAIVGLKDP 698
Query: 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRAL 588
CRP VK A+ LC+ AGVKV+MVTGDN++TA+AIA+ECGIL S ADATEPNIIEGK+FR L
Sbjct: 699 CRPGVKHAVELCQKAGVKVKMVTGDNVKTAKAIAVECGILNSYADATEPNIIEGKTFRGL 758
Query: 589 SETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648
S+ QR+EIA I VMGRSSP+DKLLLVQALR++G VVAVTGDGTNDAPALHEADIG
Sbjct: 759 SDAQRDEIADR----ISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIG 814
Query: 649 LAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINF 708
LAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVIN
Sbjct: 815 LAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINV 874
Query: 709 VAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRN 768
VAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLM R+PVGRREPLITNIMWRN
Sbjct: 875 VAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRTPVGRREPLITNIMWRN 934
Query: 769 LLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPD 828
LLIQA YQVSVLLVLNF+G IL L D H+ KVKNTLIFN+FVLCQIFNEFNARKPD
Sbjct: 935 LLIQAMYQVSVLLVLNFRGISILGLSHDRKDHAIKVKNTLIFNAFVLCQIFNEFNARKPD 994
Query: 829 EKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFI 883
E NIF G+T+N LFMGI+ +T+VLQI+II FLGKF +T RLNWK W+ISVVIG I
Sbjct: 995 EFNIFKGVTRNYLFMGIIGLTVVLQIVIILFLGKFTTTVRLNWKQWLISVVIGLI 1049
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224144297|ref|XP_002325251.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222866685|gb|EEF03816.1| autoinhibited calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/650 (77%), Positives = 586/650 (90%), Gaps = 5/650 (0%)
Query: 235 RFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYS 294
R+FTGHTKN G+ +F AGKTKVS AVDGA+KILTVAVTIVVVAVPEGLPLAVTLTLAYS
Sbjct: 399 RYFTGHTKNFDGSPEFVAGKTKVSKAVDGAVKILTVAVTIVVVAVPEGLPLAVTLTLAYS 458
Query: 295 MRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQL 354
MRKMM DKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEA+ GG+KM+ +S SQL
Sbjct: 459 MRKMMRDKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAFSGGKKMDLPESKSQL 518
Query: 355 SPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSV 414
P+++SLL+EGIAQNTTGSV++P GG+ E+SGSPTEKAI+ W +KLGMNF+AVRSE +V
Sbjct: 519 PPILSSLLIEGIAQNTTGSVFVPEGGGDLEISGSPTEKAIMGWAIKLGMNFDAVRSESNV 578
Query: 415 LHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTF 474
+HVFPFNS KK+GGVA+QLPNS+VHIHWKGAAEIVL SCT Y+D V +D+DK+ F
Sbjct: 579 IHVFPFNSEKKKGGVALQLPNSQVHIHWKGAAEIVLASCTKYVDASGNTVPLDQDKVSFF 638
Query: 475 KKAIEDMASSSLRCVAIAYRTYERERIP-DEEELSRWALPEDDLVLLAIVGIKDPCRPSV 533
KKAIEDMA SSLRCV+IAYRTY+ +++P DE++L++W +P+DDLVLLAI+GIKDPCRP V
Sbjct: 639 KKAIEDMACSSLRCVSIAYRTYDMDKVPADEQQLAQWVIPQDDLVLLAIIGIKDPCRPGV 698
Query: 534 KDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQR 593
+DA+RLC+ AGVKVRMVTGDN QTA+AIALECGIL+SE DA EPN+IEG+ FR S+++R
Sbjct: 699 RDAVRLCQNAGVKVRMVTGDNPQTAKAIALECGILSSEEDAVEPNVIEGRVFREYSDSER 758
Query: 594 EEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGI 653
E+IA + I VMGRSSP+DKLLLVQAL++RG VVAVTGDGTNDAPALHEADIGL+MGI
Sbjct: 759 EDIAEK----ISVMGRSSPNDKLLLVQALKRRGHVVAVTGDGTNDAPALHEADIGLSMGI 814
Query: 654 QGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVS 713
QGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAAL+IN V+A+S
Sbjct: 815 QGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVSAMS 874
Query: 714 SGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQA 773
SG+VPLNAVQLLWVNLIMDTLGALALATEPPTDHLM RSPVGRREPLITNIMWRNLL+QA
Sbjct: 875 SGEVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMNRSPVGRREPLITNIMWRNLLVQA 934
Query: 774 SYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIF 833
+YQV+VLLVLNF+G+ IL LE ++ + +VKNTLIFN+FVLCQIFNEFNARKPDE NIF
Sbjct: 935 AYQVTVLLVLNFRGESILGLEHETPQRAIEVKNTLIFNAFVLCQIFNEFNARKPDEINIF 994
Query: 834 GGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFI 883
GI+KN LF+ I+ +TLVLQ++I++F+GKF ST +LNWK W+IS++IGFI
Sbjct: 995 KGISKNHLFIAIIGITLVLQVIIVEFVGKFTSTVKLNWKQWLISIIIGFI 1044
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449465342|ref|XP_004150387.1| PREDICTED: calcium-transporting ATPase 10, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1020 bits (2638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/645 (78%), Positives = 577/645 (89%), Gaps = 7/645 (1%)
Query: 231 VRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLT 290
V R+FTGH+KN G+ QF AG+TKV AVDGAIKI+T+AVTIVVVAVPEGLPLAVTLT
Sbjct: 395 VLLARYFTGHSKNPDGSRQFIAGQTKVGRAVDGAIKIVTIAVTIVVVAVPEGLPLAVTLT 454
Query: 291 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS 350
LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLT+NQMT+VEAY GG+K++P +
Sbjct: 455 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTVNQMTIVEAYAGGKKIDPPEK 514
Query: 351 NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRS 410
S+ SP + SLLVEGIA N+ GSVY+P +GGE EV+GSPTEKAIL WG+KLGMNFEA+R+
Sbjct: 515 KSEFSPTLHSLLVEGIALNSNGSVYVPESGGEVEVTGSPTEKAILNWGIKLGMNFEALRT 574
Query: 411 ECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDK 470
E ++LHVFPF+S KKRGGVA Q N +VH+HWKGAAEIVL SCT Y+D D+ VQ+DEDK
Sbjct: 575 ESTILHVFPFSSDKKRGGVACQQDN-QVHVHWKGAAEIVLASCTQYMDEHDQFVQLDEDK 633
Query: 471 LLTFKKAIEDMASSSLRCVAIAYRTYERERIPD-EEELSRWALPEDDLVLLAIVGIKDPC 529
+ FK+AIEDMAS SLRCVAIAYR + E +PD EE+LS+WALPE+DLVLLAIVG+KDPC
Sbjct: 634 MKYFKRAIEDMASRSLRCVAIAYRPVDPENVPDSEEQLSKWALPEEDLVLLAIVGLKDPC 693
Query: 530 RPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALS 589
RP VKDA+RLC+ AGVKVRMVTGDN+QTARAIALECGIL S++DATEPN+IEGK FRALS
Sbjct: 694 RPGVKDAVRLCQNAGVKVRMVTGDNVQTARAIALECGILGSDSDATEPNLIEGKVFRALS 753
Query: 590 ETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL 649
+ QREE+A + I VMGRSSP+DKLLLVQALRKRG VVAVTGDGTNDAPALHEADIGL
Sbjct: 754 DAQREEVAEK----ISVMGRSSPNDKLLLVQALRKRGHVVAVTGDGTNDAPALHEADIGL 809
Query: 650 AMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFV 709
AMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAAL+IN V
Sbjct: 810 AMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVV 869
Query: 710 AAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNL 769
AA+SSG VPLNAVQLLWVNLIMDTLGALALATEPPT+HLM R PVGRREPLITNIMWRNL
Sbjct: 870 AAISSGGVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDRPPVGRREPLITNIMWRNL 929
Query: 770 LIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDE 829
LIQA YQV+VLLVLNF+G+ +L+L + S + KV+NTLIFN+FVLCQIFNEFNARKPDE
Sbjct: 930 LIQAFYQVTVLLVLNFRGRSLLHL-NHSKFEAIKVQNTLIFNAFVLCQIFNEFNARKPDE 988
Query: 830 KNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHW 874
KNIF G+TKN LF+GI+A+T++LQ++II+FLGKF ST RLNWK+W
Sbjct: 989 KNIFKGVTKNYLFIGIIAITVILQVIIIEFLGKFTSTVRLNWKYW 1033
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449521431|ref|XP_004167733.1| PREDICTED: calcium-transporting ATPase 8, plasma membrane-type-like, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1020 bits (2637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/645 (78%), Positives = 577/645 (89%), Gaps = 7/645 (1%)
Query: 231 VRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLT 290
V R+FTGH+KN G+ QF AG+TKV AVDGAIKI+T+AVTIVVVAVPEGLPLAVTLT
Sbjct: 207 VLLARYFTGHSKNPDGSRQFIAGQTKVGRAVDGAIKIVTIAVTIVVVAVPEGLPLAVTLT 266
Query: 291 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS 350
LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLT+NQMT+VEAY GG+K++P +
Sbjct: 267 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTVNQMTIVEAYAGGKKIDPPEK 326
Query: 351 NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRS 410
S+ SP + SLLVEGIA N+ GSVY+P +GGE EV+GSPTEKAIL WG+KLGMNFEA+R+
Sbjct: 327 KSEFSPTLHSLLVEGIALNSNGSVYVPESGGEVEVTGSPTEKAILNWGIKLGMNFEALRT 386
Query: 411 ECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDK 470
E ++LHVFPF+S KKRGGVA Q N +VH+HWKGAAEIVL SCT Y+D D+ VQ+DEDK
Sbjct: 387 ESTILHVFPFSSDKKRGGVACQQDN-QVHVHWKGAAEIVLASCTQYMDEHDQFVQLDEDK 445
Query: 471 LLTFKKAIEDMASSSLRCVAIAYRTYERERIPD-EEELSRWALPEDDLVLLAIVGIKDPC 529
+ FK+AIEDMAS SLRCVAIAYR + E +PD EE+LS+WALPE+DLVLLAIVG+KDPC
Sbjct: 446 MKYFKRAIEDMASRSLRCVAIAYRPVDPENVPDSEEQLSKWALPEEDLVLLAIVGLKDPC 505
Query: 530 RPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALS 589
RP VKDA+RLC+ AGVKVRMVTGDN+QTARAIALECGIL S++DATEPN+IEGK FRALS
Sbjct: 506 RPGVKDAVRLCQNAGVKVRMVTGDNVQTARAIALECGILGSDSDATEPNLIEGKVFRALS 565
Query: 590 ETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL 649
+ QREE+A + I VMGRSSP+DKLLLVQALRKRG VVAVTGDGTNDAPALHEADIGL
Sbjct: 566 DAQREEVAEK----ISVMGRSSPNDKLLLVQALRKRGHVVAVTGDGTNDAPALHEADIGL 621
Query: 650 AMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFV 709
AMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAAL+IN V
Sbjct: 622 AMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVV 681
Query: 710 AAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNL 769
AA+SSG VPLNAVQLLWVNLIMDTLGALALATEPPT+HLM R PVGRREPLITNIMWRNL
Sbjct: 682 AAISSGGVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDRPPVGRREPLITNIMWRNL 741
Query: 770 LIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDE 829
LIQA YQV+VLLVLNF+G+ +L+L + S + KV+NTLIFN+FVLCQIFNEFNARKPDE
Sbjct: 742 LIQAFYQVTVLLVLNFRGRSLLHL-NHSKFEAIKVQNTLIFNAFVLCQIFNEFNARKPDE 800
Query: 830 KNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHW 874
KNIF G+TKN LF+GI+A+T++LQ++II+FLGKF ST RLNWK+W
Sbjct: 801 KNIFKGVTKNYLFIGIIAITVILQVIIIEFLGKFTSTVRLNWKYW 845
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297735450|emb|CBI17890.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1011 bits (2615), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/650 (78%), Positives = 575/650 (88%), Gaps = 5/650 (0%)
Query: 235 RFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYS 294
R+FTGHTKN+ G+ QF G+T V DAVDGAIKI+TVAVTIVVVAVPEGLPLAVTLTLAYS
Sbjct: 399 RYFTGHTKNSDGSKQFIPGRTGVGDAVDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYS 458
Query: 295 MRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQL 354
MRKMM DKALVRRLSACETMGS+TTICSDKTGTLTLNQMTVV AY GG+K++ D S
Sbjct: 459 MRKMMVDKALVRRLSACETMGSSTTICSDKTGTLTLNQMTVVVAYAGGKKIDTPDRGSLS 518
Query: 355 SPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSV 414
S +++SLL+EGIAQNT GSV++P GG+ EVSGSPTEKAIL WG+K+GMNFEAVRS S+
Sbjct: 519 SSLLSSLLIEGIAQNTNGSVFIPEGGGDVEVSGSPTEKAILNWGIKIGMNFEAVRSGSSI 578
Query: 415 LHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTF 474
+ VFPFNS KKRGGVA++LP+S+VH+HWKGAAEIVL SCT YID +D +V M EDK+L F
Sbjct: 579 IQVFPFNSEKKRGGVAIKLPDSQVHLHWKGAAEIVLASCTRYIDENDNVVPMTEDKVLFF 638
Query: 475 KKAIEDMASSSLRCVAIAYRTYERERIP-DEEELSRWALPEDDLVLLAIVGIKDPCRPSV 533
KKAIEDMA+ SLRCVAIAYR YE E +P DEE+L +W LPEDDLVLLAIVGIKDPCRP V
Sbjct: 639 KKAIEDMAAGSLRCVAIAYRPYEMENVPTDEEQLDQWVLPEDDLVLLAIVGIKDPCRPGV 698
Query: 534 KDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQR 593
++A++LC+ AGVKVRMVTGDN+QTA+AIALECGIL S+ADATEPN+IEGKSFRAL E QR
Sbjct: 699 REAVQLCQKAGVKVRMVTGDNLQTAKAIALECGILVSDADATEPNLIEGKSFRALPELQR 758
Query: 594 EEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGI 653
++IA + I VMGRSSP+DKLLLVQAL+K+G VVAVTGDGTNDAPALHEADIGLAMGI
Sbjct: 759 QDIADK----ISVMGRSSPNDKLLLVQALKKKGHVVAVTGDGTNDAPALHEADIGLAMGI 814
Query: 654 QGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVS 713
GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAAL+IN VAA+S
Sbjct: 815 SGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAIS 874
Query: 714 SGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQA 773
SG+VPLNAVQLLWVNLIMDTLGALALATEPPTDHLM R PVGRREPLITNIMWRNLLIQA
Sbjct: 875 SGNVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRPPVGRREPLITNIMWRNLLIQA 934
Query: 774 SYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIF 833
YQV VLLVLNF+G IL LE D+ ++K KNT+IFN+FVLCQIFNEFNARKPDE N+F
Sbjct: 935 LYQVIVLLVLNFRGTSILKLEGDTPERASKEKNTVIFNAFVLCQIFNEFNARKPDEINVF 994
Query: 834 GGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFI 883
G+T NRLF+GIV +TLVLQILII+FLGKF ST RLNW+ W++ + IG I
Sbjct: 995 KGVTTNRLFIGIVGITLVLQILIIEFLGKFTSTVRLNWQLWLVCIGIGII 1044
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359485123|ref|XP_002262829.2| PREDICTED: calcium-transporting ATPase 10, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1011 bits (2615), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/650 (78%), Positives = 575/650 (88%), Gaps = 5/650 (0%)
Query: 235 RFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYS 294
R+FTGHTKN+ G+ QF G+T V DAVDGAIKI+TVAVTIVVVAVPEGLPLAVTLTLAYS
Sbjct: 399 RYFTGHTKNSDGSKQFIPGRTGVGDAVDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYS 458
Query: 295 MRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQL 354
MRKMM DKALVRRLSACETMGS+TTICSDKTGTLTLNQMTVV AY GG+K++ D S
Sbjct: 459 MRKMMVDKALVRRLSACETMGSSTTICSDKTGTLTLNQMTVVVAYAGGKKIDTPDRGSLS 518
Query: 355 SPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSV 414
S +++SLL+EGIAQNT GSV++P GG+ EVSGSPTEKAIL WG+K+GMNFEAVRS S+
Sbjct: 519 SSLLSSLLIEGIAQNTNGSVFIPEGGGDVEVSGSPTEKAILNWGIKIGMNFEAVRSGSSI 578
Query: 415 LHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTF 474
+ VFPFNS KKRGGVA++LP+S+VH+HWKGAAEIVL SCT YID +D +V M EDK+L F
Sbjct: 579 IQVFPFNSEKKRGGVAIKLPDSQVHLHWKGAAEIVLASCTRYIDENDNVVPMTEDKVLFF 638
Query: 475 KKAIEDMASSSLRCVAIAYRTYERERIP-DEEELSRWALPEDDLVLLAIVGIKDPCRPSV 533
KKAIEDMA+ SLRCVAIAYR YE E +P DEE+L +W LPEDDLVLLAIVGIKDPCRP V
Sbjct: 639 KKAIEDMAAGSLRCVAIAYRPYEMENVPTDEEQLDQWVLPEDDLVLLAIVGIKDPCRPGV 698
Query: 534 KDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQR 593
++A++LC+ AGVKVRMVTGDN+QTA+AIALECGIL S+ADATEPN+IEGKSFRAL E QR
Sbjct: 699 REAVQLCQKAGVKVRMVTGDNLQTAKAIALECGILVSDADATEPNLIEGKSFRALPELQR 758
Query: 594 EEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGI 653
++IA + I VMGRSSP+DKLLLVQAL+K+G VVAVTGDGTNDAPALHEADIGLAMGI
Sbjct: 759 QDIADK----ISVMGRSSPNDKLLLVQALKKKGHVVAVTGDGTNDAPALHEADIGLAMGI 814
Query: 654 QGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVS 713
GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAAL+IN VAA+S
Sbjct: 815 SGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAIS 874
Query: 714 SGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQA 773
SG+VPLNAVQLLWVNLIMDTLGALALATEPPTDHLM R PVGRREPLITNIMWRNLLIQA
Sbjct: 875 SGNVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRPPVGRREPLITNIMWRNLLIQA 934
Query: 774 SYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIF 833
YQV VLLVLNF+G IL LE D+ ++K KNT+IFN+FVLCQIFNEFNARKPDE N+F
Sbjct: 935 LYQVIVLLVLNFRGTSILKLEGDTPERASKEKNTVIFNAFVLCQIFNEFNARKPDEINVF 994
Query: 834 GGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFI 883
G+T NRLF+GIV +TLVLQILII+FLGKF ST RLNW+ W++ + IG I
Sbjct: 995 KGVTTNRLFIGIVGITLVLQILIIEFLGKFTSTVRLNWQLWLVCIGIGII 1044
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350539882|ref|NP_001234817.1| auto-inhibited Ca2 -transporting ATPase 10 [Solanum lycopersicum] gi|345548126|gb|AEO12147.1| auto-inhibited Ca2+-transporting ATPase 10 [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/653 (75%), Positives = 570/653 (87%), Gaps = 5/653 (0%)
Query: 231 VRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLT 290
V +RFFTGHT N G+ QFKAGKTKV AVDGAIKI T+AVTIVVVAVPEGLPLAVTLT
Sbjct: 398 VXMIRFFTGHTYNPDGSPQFKAGKTKVGKAVDGAIKIFTIAVTIVVVAVPEGLPLAVTLT 457
Query: 291 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS 350
LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVE Y+ G+K++P D
Sbjct: 458 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEVYISGKKIDPPDD 517
Query: 351 NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRS 410
S++ P V SLL EG+ NTTGSV++P GG E+SGSPTEKAILQWG+ LGMNF+AVRS
Sbjct: 518 RSEVPPTVLSLLHEGVGLNTTGSVFVPQGGGAVEISGSPTEKAILQWGLNLGMNFDAVRS 577
Query: 411 ECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDK 470
E S++H FPFNS KKRGGVAV+L +SEVH+HWKGAAEIVL CT +ID + +V + +DK
Sbjct: 578 EASIIHAFPFNSEKKRGGVAVKL-DSEVHLHWKGAAEIVLSCCTSFIDENGSVVPLGDDK 636
Query: 471 LLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCR 530
+ K+AI +MA+SSLRCVAIAYR YE +++P EEE+ W +PE DL+LLAIVGIKDPCR
Sbjct: 637 MSLLKEAISNMAASSLRCVAIAYRPYEVDKVPTEEEIDHWEIPEGDLILLAIVGIKDPCR 696
Query: 531 PSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSE 590
P V+DA++LC AGVKVRMVTGDN+QTARAIALECGIL S+ADATEPN+IEGK FRA+S+
Sbjct: 697 PGVRDAVQLCIDAGVKVRMVTGDNLQTARAIALECGILRSDADATEPNLIEGKRFRAMSD 756
Query: 591 TQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLA 650
+R+ +A + I VMGRSSP+DKLLLVQALR G VVAVTGDGTNDAPALHEADIGLA
Sbjct: 757 EERKNVADK----ISVMGRSSPNDKLLLVQALRSNGHVVAVTGDGTNDAPALHEADIGLA 812
Query: 651 MGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVA 710
MGI GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAAL+IN VA
Sbjct: 813 MGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVA 872
Query: 711 AVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLL 770
AV++GDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLM R PVGRREPL+TNIMWRNLL
Sbjct: 873 AVTAGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHREPVGRREPLVTNIMWRNLL 932
Query: 771 IQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEK 830
IQA YQVSVLLVLNF+GK+IL+L+ +++A + +VKNTLIFN+FV CQ+FNEFNARKPDE
Sbjct: 933 IQALYQVSVLLVLNFRGKQILHLDHETSARAIEVKNTLIFNAFVFCQVFNEFNARKPDEM 992
Query: 831 NIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFI 883
N+F G+ KNRLF+ IV +T+VLQ++II FLGKF ST RL+W+ W++S+VIG I
Sbjct: 993 NVFKGVLKNRLFVSIVGLTVVLQVIIIFFLGKFTSTVRLSWQLWLVSIVIGVI 1045
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|8843813|dbj|BAA97361.1| Ca2+-transporting ATPase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/684 (72%), Positives = 565/684 (82%), Gaps = 26/684 (3%)
Query: 217 ASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAV---- 272
S+ L + L + R+FTGHTK+ G QF GKTKV +D +K+LTVAV
Sbjct: 377 GSIGLAVAAAVLV-ILLTRYFTGHTKDNNGGPQFVKGKTKVGHVIDDVVKVLTVAVCFLV 435
Query: 273 -------------TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATT 319
TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATT
Sbjct: 436 NNLSLIGIRDPAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATT 495
Query: 320 ICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPN 379
ICSDKTGTLTLNQMTVVE+Y GG+K TD+ QL +TSL+VEGI+QNTTGS+++P
Sbjct: 496 ICSDKTGTLTLNQMTVVESYAGGKK---TDT-EQLPATITSLVVEGISQNTTGSIFVPEG 551
Query: 380 GGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVH 439
GG+ E SGSPTEKAIL WG+KLGMNFE RS+ S+LH FPFNS KKRGGVAV+ + EVH
Sbjct: 552 GGDLEYSGSPTEKAILGWGVKLGMNFETARSQSSILHAFPFNSEKKRGGVAVKTADGEVH 611
Query: 440 IHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERE 499
+HWKGA+EIVL SC YID D + M +DK FK I DMA +LRCVA+A+RTYE E
Sbjct: 612 VHWKGASEIVLASCRSYIDEDGNVAPMTDDKASFFKNGINDMAGRTLRCVALAFRTYEAE 671
Query: 500 RIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTAR 559
++P EELS+W LPEDDL+LLAIVGIKDPCRP VKD++ LC+ AGVKVRMVTGDN+QTAR
Sbjct: 672 KVPTGEELSKWVLPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTAR 731
Query: 560 AIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLV 619
AIALECGIL+S+AD +EP +IEGKSFR +++ +R++I+ + I VMGRSSP+DKLLLV
Sbjct: 732 AIALECGILSSDADLSEPTLIEGKSFREMTDAERDKISDK----ISVMGRSSPNDKLLLV 787
Query: 620 QALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679
Q+LR++G VVAVTGDGTNDAPALHEADIGLAMGI GTEVAKESSDIIILDDNFASVVKVV
Sbjct: 788 QSLRRQGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVV 847
Query: 680 RWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALAL 739
RWGRSVYANIQKFIQFQLTVNVAALVIN VAA+SSGDVPL AVQLLWVNLIMDTLGALAL
Sbjct: 848 RWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALAL 907
Query: 740 ATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA 799
ATEPPTDHLM R PVGR+EPLITNIMWRNLLIQA YQVSVLL LNF+G IL LE + +
Sbjct: 908 ATEPPTDHLMGRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHE 967
Query: 800 HSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQF 859
H+ +VKNT+IFN+FVLCQ FNEFNARKPDEKNIF G+ KNRLFMGI+ +TLVLQ++I++F
Sbjct: 968 HATRVKNTIIFNAFVLCQAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVIIVEF 1027
Query: 860 LGKFASTTRLNWKHWIISVVIGFI 883
LGKFASTT+LNWK W+I V IG I
Sbjct: 1028 LGKFASTTKLNWKQWLICVGIGVI 1051
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356547482|ref|XP_003542141.1| PREDICTED: calcium-transporting ATPase 9, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1000 bits (2586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/650 (75%), Positives = 571/650 (87%), Gaps = 6/650 (0%)
Query: 235 RFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYS 294
R+F+GH+K+ G +QF AG+T +S AVDG IKI T+AVTIVVVAVPEGLPLAVTLTLAYS
Sbjct: 410 RYFSGHSKDLDGKVQFVAGETSISKAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYS 469
Query: 295 MRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQL 354
MRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEA+VG +K+NP D ++L
Sbjct: 470 MRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAFVGRKKLNPPDDLTKL 529
Query: 355 SPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSV 414
P V+SL+ EGIAQNTTG++++P +GGEAEVSGSPTEKAIL W +KLGMNF+ +RS ++
Sbjct: 530 HPEVSSLINEGIAQNTTGNIFVPKDGGEAEVSGSPTEKAILSWAVKLGMNFDLIRSNSTI 589
Query: 415 LHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTF 474
LHVFPFNS KKRGG+A++LP+S VHIHWKGAAEIVL CT Y+D+D L ++E+K+ F
Sbjct: 590 LHVFPFNSEKKRGGLALKLPDSAVHIHWKGAAEIVLGKCTQYLDSDGHLKSIEEEKVF-F 648
Query: 475 KKAIEDMASSSLRCVAIAYRTYERERIP-DEEELSRWALPEDDLVLLAIVGIKDPCRPSV 533
K AIEDMA+ SLRCVAIAYR+Y+ ++IP +EEEL +W LPE +LVLLAIVGIKDPCRP V
Sbjct: 649 KNAIEDMAAQSLRCVAIAYRSYDLDKIPSNEEELDQWCLPEHELVLLAIVGIKDPCRPGV 708
Query: 534 KDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQR 593
KDA+++C AGVKVRMVTGDN+QTA+AIALECGIL S DA EPNIIEGK+FR LSE +R
Sbjct: 709 KDAVKVCTEAGVKVRMVTGDNLQTAKAIALECGILMSTEDAVEPNIIEGKTFRELSEKER 768
Query: 594 EEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGI 653
E++A + I VMGRSSP+DKLL+VQALR G+VVAVTGDGTNDAPALHEADIGL+MGI
Sbjct: 769 EQVAKK----ITVMGRSSPTDKLLIVQALRTGGEVVAVTGDGTNDAPALHEADIGLSMGI 824
Query: 654 QGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVS 713
QGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVIN VAA+S
Sbjct: 825 QGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAIS 884
Query: 714 SGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQA 773
SGDVPLNAVQLLWVNLIMDTLGALALATEPPTD+LM RSPVGRREPLITN+MWRNL++QA
Sbjct: 885 SGDVPLNAVQLLWVNLIMDTLGALALATEPPTDNLMHRSPVGRREPLITNVMWRNLIVQA 944
Query: 774 SYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIF 833
YQV VLLVLNF G+ IL DS AH+ +VKNTLIFN+FV CQIFNEFNARKP+E N+F
Sbjct: 945 LYQVIVLLVLNFGGESILRNNQDSIAHTIQVKNTLIFNAFVFCQIFNEFNARKPEEMNVF 1004
Query: 834 GGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFI 883
G+TKNRLFMGIV +T VLQI+II+FLGKF +T +L+WK W+ S+ IG +
Sbjct: 1005 RGVTKNRLFMGIVGMTFVLQIIIIEFLGKFTTTVKLDWKLWLASLCIGLV 1054
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 892 | ||||||
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.724 | 0.604 | 0.717 | 2.2e-304 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.723 | 0.600 | 0.733 | 2.8e-304 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.723 | 0.593 | 0.708 | 4.8e-291 | |
| TAIR|locus:2084578 | 1017 | AT3G22910 [Arabidopsis thalian | 0.701 | 0.615 | 0.576 | 1e-193 | |
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.696 | 0.601 | 0.554 | 2.4e-192 | |
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.655 | 0.573 | 0.533 | 4.5e-176 | |
| TAIR|locus:2120096 | 1014 | ACA2 "calcium ATPase 2" [Arabi | 0.655 | 0.576 | 0.539 | 1.6e-171 | |
| TAIR|locus:2059201 | 1015 | ACA7 "auto-regulated Ca2+-ATPa | 0.655 | 0.576 | 0.529 | 8.9e-169 | |
| TAIR|locus:2168397 | 1049 | AT5G53010 [Arabidopsis thalian | 0.590 | 0.502 | 0.480 | 3e-150 | |
| TAIR|locus:2082528 | 1025 | ACA11 "autoinhibited Ca2+-ATPa | 0.575 | 0.500 | 0.525 | 2e-149 |
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2386 (845.0 bits), Expect = 2.2e-304, Sum P(2) = 2.2e-304
Identities = 469/654 (71%), Positives = 549/654 (83%)
Query: 231 VRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILXXXXXXXXXXXPEGLPLAVTLT 290
V VR+FTGHTKN G QF GKTK +D ++I PEGLPLAVTLT
Sbjct: 390 VLVVRYFTGHTKNEQGGPQFIGGKTKFEHVLDDLVEIFTVAVTIVVVAVPEGLPLAVTLT 449
Query: 291 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS 350
LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLN+MTVVE Y G +KM+ DS
Sbjct: 450 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVECYAGLQKMDSPDS 509
Query: 351 NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRS 410
+S+L TS+LVEGIA NTTGSV+ +G E +VSGSPTE+AIL W +KLGM+F+A++S
Sbjct: 510 SSKLPSAFTSILVEGIAHNTTGSVFRSESG-EIQVSGSPTERAILNWAIKLGMDFDALKS 568
Query: 411 ECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDK 470
E S + FPFNS KKRGGVAV+ P+S VHIHWKGAAEIVL SCT Y+D + V M EDK
Sbjct: 569 ESSAVQFFPFNSEKKRGGVAVKSPDSSVHIHWKGAAEIVLGSCTHYMDESESFVDMSEDK 628
Query: 471 LLTFKKAIEDMASSSLRCVAIAYRTYERERIP-DEEELSRWALPEDDLVLLAIVGIKDPC 529
+ K AI+DMA+ SLRCVAIA+RT+E ++IP DEE+LSRW LPEDDL+LLAIVGIKDPC
Sbjct: 629 MGGLKDAIDDMAARSLRCVAIAFRTFEADKIPTDEEQLSRWELPEDDLILLAIVGIKDPC 688
Query: 530 RPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALS 589
RP VK+++ LC+ AGVKVRMVTGDNIQTA+AIALECGIL S++DA+EPN+IEGK FR+ S
Sbjct: 689 RPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIALECGILASDSDASEPNLIEGKVFRSYS 748
Query: 590 ETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL 649
E +R+ I E I VMGRSSP+DKLLLVQ+L++RG VVAVTGDGTNDAPALHEADIGL
Sbjct: 749 EEERDRICEE----ISVMGRSSPNDKLLLVQSLKRRGHVVAVTGDGTNDAPALHEADIGL 804
Query: 650 AMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFV 709
AMGIQGTEVAKE SDIIILDDNF SVVKVVRWGRSVYANIQKFIQFQLTVNVAALVIN V
Sbjct: 805 AMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVV 864
Query: 710 AAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNL 769
AA+S+G+VPL AVQLLWVNLIMDTLGALALATEPPTDHLM R+PVGRREPLITNIMWRNL
Sbjct: 865 AAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMDRAPVGRREPLITNIMWRNL 924
Query: 770 LIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDE 829
IQA YQV+VLL+LNF+G IL+L+S NA +VKNT+IFN+FV+CQ+FNEFNARKPDE
Sbjct: 925 FIQAMYQVTVLLILNFRGISILHLKSKPNAE--RVKNTVIFNAFVICQVFNEFNARKPDE 982
Query: 830 KNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFI 883
NIF G+ +N LF+GI+++T+VLQ++I++FLG FASTT+L+W+ W++ + IG I
Sbjct: 983 INIFRGVLRNHLFVGIISITIVLQVVIVEFLGTFASTTKLDWEMWLVCIGIGSI 1036
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2465 (872.8 bits), Expect = 2.8e-304, Sum P(2) = 2.8e-304
Identities = 479/653 (73%), Positives = 549/653 (84%)
Query: 231 VRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILXXXXXXXXXXXPEGLPLAVTLT 290
+ R+FTGHTK+ G QF GKTKV +D +K+L PEGLPLAVTLT
Sbjct: 390 ILLTRYFTGHTKDNNGGPQFVKGKTKVGHVIDDVVKVLTVAVTIVVVAVPEGLPLAVTLT 449
Query: 291 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS 350
LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVE+Y GG+K TD+
Sbjct: 450 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVESYAGGKK---TDT 506
Query: 351 NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRS 410
QL +TSL+VEGI+QNTTGS+++P GG+ E SGSPTEKAIL WG+KLGMNFE RS
Sbjct: 507 E-QLPATITSLVVEGISQNTTGSIFVPEGGGDLEYSGSPTEKAILGWGVKLGMNFETARS 565
Query: 411 ECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDK 470
+ S+LH FPFNS KKRGGVAV+ + EVH+HWKGA+EIVL SC YID D + M +DK
Sbjct: 566 QSSILHAFPFNSEKKRGGVAVKTADGEVHVHWKGASEIVLASCRSYIDEDGNVAPMTDDK 625
Query: 471 LLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCR 530
FK I DMA +LRCVA+A+RTYE E++P EELS+W LPEDDL+LLAIVGIKDPCR
Sbjct: 626 ASFFKNGINDMAGRTLRCVALAFRTYEAEKVPTGEELSKWVLPEDDLILLAIVGIKDPCR 685
Query: 531 PSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSE 590
P VKD++ LC+ AGVKVRMVTGDN+QTARAIALECGIL+S+AD +EP +IEGKSFR +++
Sbjct: 686 PGVKDSVVLCQNAGVKVRMVTGDNVQTARAIALECGILSSDADLSEPTLIEGKSFREMTD 745
Query: 591 TQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLA 650
+R++I+ + I VMGRSSP+DKLLLVQ+LR++G VVAVTGDGTNDAPALHEADIGLA
Sbjct: 746 AERDKISDK----ISVMGRSSPNDKLLLVQSLRRQGHVVAVTGDGTNDAPALHEADIGLA 801
Query: 651 MGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVA 710
MGI GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVIN VA
Sbjct: 802 MGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVA 861
Query: 711 AVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLL 770
A+SSGDVPL AVQLLWVNLIMDTLGALALATEPPTDHLM R PVGR+EPLITNIMWRNLL
Sbjct: 862 AISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGRKEPLITNIMWRNLL 921
Query: 771 IQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEK 830
IQA YQVSVLL LNF+G IL LE + + H+ +VKNT+IFN+FVLCQ FNEFNARKPDEK
Sbjct: 922 IQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFVLCQAFNEFNARKPDEK 981
Query: 831 NIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFI 883
NIF G+ KNRLFMGI+ +TLVLQ++I++FLGKFASTT+LNWK W+I V IG I
Sbjct: 982 NIFKGVIKNRLFMGIIVITLVLQVIIVEFLGKFASTTKLNWKQWLICVGIGVI 1034
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2365 (837.6 bits), Expect = 4.8e-291, Sum P(2) = 4.8e-291
Identities = 461/651 (70%), Positives = 537/651 (82%)
Query: 234 VRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILXXXXXXXXXXXPEGLPLAVTLTLAY 293
VR+FTG T++ G QF G T +SD VD +KI PEGLPLAVTLTLAY
Sbjct: 406 VRYFTGTTQDTNGATQFIKGTTSISDIVDDCVKIFTIAVTIVVVAVPEGLPLAVTLTLAY 465
Query: 294 SMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQ 353
SMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVE Y GG KM+ D+ S
Sbjct: 466 SMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVETYAGGSKMDVADNPSG 525
Query: 354 LSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECS 413
L P + +L+ EG+AQNTTG+++ P +GGE E+SGSPTEKAIL W KLGM F+ +RSE +
Sbjct: 526 LHPKLVALISEGVAQNTTGNIFHPKDGGEVEISGSPTEKAILSWAYKLGMKFDTIRSESA 585
Query: 414 VLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLT 473
++H FPFNS KKRGGVAV +SEV IHWKGAAEIVL CT Y+D++ L ++ K
Sbjct: 586 IIHAFPFNSEKKRGGVAVLRGDSEVFIHWKGAAEIVLACCTQYMDSNGTLQSIESQKEF- 644
Query: 474 FKKAIEDMASSSLRCVAIAYRTYERERIPDEEE-LSRWALPEDDLVLLAIVGIKDPCRPS 532
F+ AI+ MA +SLRCVAIA RT E ++P E+E L +WALPED+L+LLAIVGIKDPCRP
Sbjct: 645 FRVAIDSMAKNSLRCVAIACRTQELNQVPKEQEDLDKWALPEDELILLAIVGIKDPCRPG 704
Query: 533 VKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQ 592
V++A+R+C AGVKVRMVTGDN+QTA+AIALECGIL+S+ +A EP IIEGK FR LSE +
Sbjct: 705 VREAVRICTSAGVKVRMVTGDNLQTAKAIALECGILSSDTEAVEPTIIEGKVFRELSEKE 764
Query: 593 REEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMG 652
RE++A + I VMGRSSP+DKLLLVQALRK GDVVAVTGDGTNDAPALHEADIGL+MG
Sbjct: 765 REQVAKK----ITVMGRSSPNDKLLLVQALRKNGDVVAVTGDGTNDAPALHEADIGLSMG 820
Query: 653 IQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAV 712
I GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAAL+IN VAA+
Sbjct: 821 ISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAM 880
Query: 713 SSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQ 772
SSGDVPL AVQLLWVNLIMDTLGALALATEPPTDHLM R+PVGRREPLITNIMWRNLL+Q
Sbjct: 881 SSGDVPLKAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLLVQ 940
Query: 773 ASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNI 832
+ YQV+VLLVLNF G IL L +++AH+ +VKNT+IFN+FV+CQIFNEFNARKPDE N+
Sbjct: 941 SFYQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTMIFNAFVMCQIFNEFNARKPDEMNV 1000
Query: 833 FGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFI 883
F G+ KN LF+ IV VT +LQI+I+ FLGKFA T RL W+ W+ S++IG +
Sbjct: 1001 FRGVNKNPLFVAIVGVTFILQIIIVTFLGKFAHTVRLGWQLWLASIIIGLV 1051
|
|
| TAIR|locus:2084578 AT3G22910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1797 (637.6 bits), Expect = 1.0e-193, Sum P(2) = 1.0e-193
Identities = 377/654 (57%), Positives = 468/654 (71%)
Query: 231 VRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILXXXXXXXXXXXPEGLPLAVTLT 290
V +R+FTG TK+ G ++ TK + V+ +K++ PEGLPLAVTLT
Sbjct: 357 VLLIRYFTGTTKDESGNREYNGKTTKSDEIVNAVVKMVAAAVTIIVVAIPEGLPLAVTLT 416
Query: 291 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS 350
LAYSM++MM D A+VR+LSACETMGSAT IC+DKTGTLTLNQM V + + G +
Sbjct: 417 LAYSMKRMMKDNAMVRKLSACETMGSATVICTDKTGTLTLNQMKVTDFWFGLE----SGK 472
Query: 351 NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMK-LGMNFEAVR 409
S +S V L +G+A NTTGSV+ G E E SGSPTEKAIL W ++ L M E V
Sbjct: 473 ASSVSQRVVELFHQGVAMNTTGSVFKAKAGTEYEFSGSPTEKAILSWAVEELEMGMEKVI 532
Query: 410 SECSVLHVFPFNSLKKRGGVAVQLP--NSEVHI-HWKGAAEIVLDSCTGYIDTDDRLVQM 466
E V+HV FNS KKR GV ++ N+E ++ HWKGAAE +L C+ + D + +M
Sbjct: 533 EEHDVVHVEGFNSEKKRSGVLMKKKGVNTENNVVHWKGAAEKILAMCSTFCDGSGVVREM 592
Query: 467 DEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIK 526
ED + F+K I+ MA+ SLRC+A AY D E+ + L E+ L LL I+GIK
Sbjct: 593 KEDDKIQFEKIIQSMAAKSLRCIAFAYSE-------DNEDNKK--LKEEKLSLLGIIGIK 643
Query: 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFR 586
DPCRP VK A+ C+ AGV ++M+TGDNI TARAIA+ECGILT E + ++EG+ FR
Sbjct: 644 DPCRPGVKKAVEDCQFAGVNIKMITGDNIFTARAIAVECGILTPEDEMNSEAVLEGEKFR 703
Query: 587 ALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEAD 646
+ TQ E + E I VM RSSP DKLL+V+ L++ G VVAVTGDGTNDAPAL EAD
Sbjct: 704 --NYTQEERL--EKVERIKVMARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAPALKEAD 759
Query: 647 IGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVI 706
IGL+MGIQGTEVAKESSDI+ILDDNFASV V++WGR VY NIQKFIQFQLTVNVAALVI
Sbjct: 760 IGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVI 819
Query: 707 NFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMW 766
NFVAAVS+GDVPL AVQLLWVNLIMDTLGALALATE PT+ LM++ P+GR PLITNIMW
Sbjct: 820 NFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPTNDLMKKKPIGRVAPLITNIMW 879
Query: 767 RNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARK 826
RNLL QA YQ+SVLLVL F+G+ I N+ + KVKNTLIFN+FVLCQ+FNEFNAR
Sbjct: 880 RNLLAQAFYQISVLLVLQFRGRSIFNV-------TEKVKNTLIFNTFVLCQVFNEFNARS 932
Query: 827 PDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVI 880
++KN+F G+ KNRLF+GI+ VT+VLQ+++++FL +FA T RLN W + + I
Sbjct: 933 LEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLGQWGVCIAI 986
|
|
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1772 (628.8 bits), Expect = 2.4e-192, Sum P(2) = 2.4e-192
Identities = 358/646 (55%), Positives = 465/646 (71%)
Query: 231 VRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILXXXXXXXXXXXPEGLPLAVTLT 290
V VR+FTG+T+ G ++ KT V V+ ++I+ PEGLPLAVTLT
Sbjct: 362 VLLVRYFTGNTEKE-GKREYNGSKTPVDTVVNSVVRIVAAAVTIVVVAIPEGLPLAVTLT 420
Query: 291 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS 350
LAYSM++MM+D+A+VR+LSACETMGSAT IC+DKTGTLTLN+M V + ++G ++ DS
Sbjct: 421 LAYSMKRMMSDQAMVRKLSACETMGSATVICTDKTGTLTLNEMKVTKFWLGQESIHE-DS 479
Query: 351 NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWG-MKLGMNFEAVR 409
+SP V LL +G NTTGSV + +G E SGSPTEKA+L W + LGM+ E+V+
Sbjct: 480 TKMISPDVLDLLYQGTGLNTTGSVCVSDSGSTPEFSGSPTEKALLSWTVLNLGMDMESVK 539
Query: 410 SECSVLHVFPFNSLKKRGGVAVQLPNSE-VHIHWKGAAEIVLDSCTGYIDTDDRLVQMDE 468
+ VL V F+S KKR GV V+ + VH+HWKGAAE+VL C+ Y + + MD
Sbjct: 540 QKHEVLRVETFSSAKKRSGVLVRRKSDNTVHVHWKGAAEMVLAMCSHYYTSTGSVDLMDS 599
Query: 469 DKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDP 528
+ I+ MA+SSLRC+A A++ + + L ED L L+ IVG+KDP
Sbjct: 600 TAKSRIQAIIQGMAASSLRCIAFAHKIASNDSV----------LEEDGLTLMGIVGLKDP 649
Query: 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRAL 588
CRP V A+ C++AGV ++M+TGDN+ TA+AIA ECGIL E ++EG FR
Sbjct: 650 CRPGVSKAVETCKLAGVTIKMITGDNVFTAKAIAFECGILDHNDKDEEDAVVEGVQFRNY 709
Query: 589 SETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648
++ +R + + I VM RSSPSDKLL+V+ LR +G VVAVTGDGTNDAPAL EADIG
Sbjct: 710 TDEERMQKVDK----IRVMARSSPSDKLLMVKCLRLKGHVVAVTGDGTNDAPALKEADIG 765
Query: 649 LAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINF 708
L+MGIQGTEVAKESSDI+ILDDNFASV V++WGR VY NIQKFIQFQLTVNVAALVINF
Sbjct: 766 LSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINF 825
Query: 709 VAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRN 768
+AA+S+G+VPL AVQLLWVNLIMDTLGALALATE PT+ L++R PVGR E LITN+MWRN
Sbjct: 826 IAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNELLKRKPVGRTEALITNVMWRN 885
Query: 769 LLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPD 828
LL+Q+ YQ++VLL+L F+G I ++ + VK+TLIFN+FVLCQ+FNEFNAR+ +
Sbjct: 886 LLVQSLYQIAVLLILQFKGMSIFSVRKE-------VKDTLIFNTFVLCQVFNEFNAREME 938
Query: 829 EKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHW 874
+KN+F G+ +NRLF+GI+A+T+VLQ+++++FL KFA T RLN W
Sbjct: 939 KKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGWQW 984
|
|
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1565 (556.0 bits), Expect = 4.5e-176, Sum P(2) = 4.5e-176
Identities = 326/611 (53%), Positives = 430/611 (70%)
Query: 280 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAY 339
PEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSATTICSDKTGTLT N MTVV+A
Sbjct: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKAC 472
Query: 340 V--GGRKMNPTDSN----SQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKA 393
+ +++N D+ S + LL++ I NT G + + G + E+ G+PTE A
Sbjct: 473 ICEQAKEVNGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVG-KGNKTEILGTPTETA 531
Query: 394 ILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSC 453
+L++G+ LG +F+ VR +V+ V PFNS KKR GV ++LP H KGA+EIVLDSC
Sbjct: 532 LLEFGLSLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSC 591
Query: 454 TGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALP 513
YI+ D +V +DE K IE+ AS +LR + +AY +E I DE L +P
Sbjct: 592 DKYINKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAY--FE---IGDEFSLEA-PIP 645
Query: 514 EDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD 573
+ IVGIKDP RP VK+++ +C+ AG+ VRMVTGDN+ TA+AIA ECGILT +
Sbjct: 646 SGGYTCIGIVGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGI 705
Query: 574 ATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKR-GDVVAVT 632
A IEG FR S+ EE+ + + VM RSSP DK LV+ LR +VVAVT
Sbjct: 706 A-----IEGPEFREKSD---EELL-KLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVT 756
Query: 633 GDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKF 692
GDGTNDAPALHEADIGLAMGI GTEVAKES+D+IILDDNF+++V V +WGRSVY NIQKF
Sbjct: 757 GDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKF 816
Query: 693 IQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRS 752
+QFQLTVNV AL++NF++A +G+ PL AVQLLWVN+IMDTLGALALATEPP D LM+RS
Sbjct: 817 VQFQLTVNVVALIVNFLSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRS 876
Query: 753 PVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNS 812
PVGR+ I+N+MWRN+L Q+ YQ+ ++ L +GK + L+ S+ NTLIFN
Sbjct: 877 PVGRKGNFISNVMWRNILGQSLYQLVIIWCLQTKGKTMFGLDGPD---SDLTLNTLIFNI 933
Query: 813 FVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWK 872
FV CQ+FNE ++R+ ++ ++F GI KN +F+ ++ T+V Q++II+ LG FA TT LN
Sbjct: 934 FVFCQVFNEISSREMEKIDVFKGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTPLNLG 993
Query: 873 HWIISVVIGFI 883
W++S+++GF+
Sbjct: 994 QWLVSIILGFL 1004
|
|
| TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1538 (546.5 bits), Expect = 1.6e-171, Sum P(2) = 1.6e-171
Identities = 329/610 (53%), Positives = 415/610 (68%)
Query: 280 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAY 339
PEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSATTICSDKTGTLT N MTVV++
Sbjct: 411 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSC 470
Query: 340 VGGRKMNPTDSNSQLSPMV----TSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAIL 395
+ + + S L + LL++ I NT G V + +G + E+ G+PTE AIL
Sbjct: 471 ICMNVQDVANKGSSLQSEIPESAVKLLIQSIFNNTGGEVVVNKHG-KTELLGTPTETAIL 529
Query: 396 QWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNS-EVHIHWKGAAEIVLDSCT 454
+ G+ LG F+ R V+ V PFNS KKR GV ++LP + H KGA+EIVL +C
Sbjct: 530 ELGLSLGGKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACD 589
Query: 455 GYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPE 514
+++ +V +DE+ + I + A+ +LR + +AY E PD+ A+P
Sbjct: 590 KVVNSSGEVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDD------AIPA 643
Query: 515 DDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADA 574
+ IVGIKDP RP VK+++ LCR AG+ VRMVTGDNI TA+AIA ECGILT + A
Sbjct: 644 SGFTCVGIVGIKDPVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIA 703
Query: 575 TEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGD-VVAVTG 633
IEG FR E +EE+ E I VM RSSP DK LV+ LR D VVAVTG
Sbjct: 704 -----IEGPVFR---EKNQEELL-ELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTG 754
Query: 634 DGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFI 693
DGTNDAPALHEADIGLAMGI GTEVAKES+D+IILDDNF+++V V +WGRSVY NIQKF+
Sbjct: 755 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFV 814
Query: 694 QFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSP 753
QFQLTVNV ALV+NF +A +G PL AVQLLWVN+IMDTLGALALATEPP D LM+R P
Sbjct: 815 QFQLTVNVVALVVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLP 874
Query: 754 VGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSF 813
VGRR ITN MWRN+L QA YQ V+ +L +GK + L+ S + NTLIFN F
Sbjct: 875 VGRRGNFITNAMWRNILGQAVYQFIVIWILQAKGKAMFGLDGPD---STLMLNTLIFNCF 931
Query: 814 VLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKH 873
V CQ+FNE ++R+ +E ++F GI N +F+ ++ T+ QI+II+FLG FASTT L
Sbjct: 932 VFCQVFNEISSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTITQ 991
Query: 874 WIISVVIGFI 883
WI S+ IGF+
Sbjct: 992 WIFSIFIGFL 1001
|
|
| TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1507 (535.5 bits), Expect = 8.9e-169, Sum P(2) = 8.9e-169
Identities = 323/610 (52%), Positives = 411/610 (67%)
Query: 280 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAY 339
PEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSATTICSDKTGTLT N MTVV++
Sbjct: 412 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSC 471
Query: 340 VGGRKMNPTDSNSQLSPMVTS----LLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAIL 395
+ + +S L + LL++ I NT G V + G + E+ G+PTE AIL
Sbjct: 472 ICMNVQDVASKSSSLQSDIPEAALKLLLQLIFNNTGGEVVVNERG-KTEILGTPTETAIL 530
Query: 396 QWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNS-EVHIHWKGAAEIVLDSCT 454
+ G+ LG F+ R V+ V PFNS KKR GV ++LP + H KGA+EIVL +C
Sbjct: 531 ELGLSLGGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVLAACD 590
Query: 455 GYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPE 514
I++ +V +D++ + I++ A+ +LR + +AY E DE +PE
Sbjct: 591 KVINSSGEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSADE------GIPE 644
Query: 515 DDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADA 574
+ IVGIKDP RP V++++ LCR AG+ VRMVTGDNI TA+AIA ECGILT + A
Sbjct: 645 KGFTCIGIVGIKDPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILTDDGIA 704
Query: 575 TEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGD-VVAVTG 633
IEG FR E +EE+ E I VM RSSP DK LV+ LR D VVAVTG
Sbjct: 705 -----IEGPVFR---EKNQEEML-ELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTG 755
Query: 634 DGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFI 693
DGTNDAPALHEADIGLAMGI GTEVAKE +D+IILDDNF+++V V +WGRSVY NIQKF+
Sbjct: 756 DGTNDAPALHEADIGLAMGIAGTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKFV 815
Query: 694 QFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSP 753
QFQLTVNV AL++NF +A +G PL AVQLLWVN+IMDTLGALALATEPP + LM+R P
Sbjct: 816 QFQLTVNVVALIVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNNELMKRMP 875
Query: 754 VGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSF 813
VGRR ITN MWRN+L QA YQ ++ +L +GK + L S V NTLIFN F
Sbjct: 876 VGRRGNFITNAMWRNILGQAVYQFIIIWILQAKGKSMFGLVGSD---STLVLNTLIFNCF 932
Query: 814 VLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKH 873
V CQ+FNE ++R+ +E ++F GI N +F+ ++ T+ QI+II+FLG FASTT L
Sbjct: 933 VFCQVFNEVSSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTIVQ 992
Query: 874 WIISVVIGFI 883
W S+ +GF+
Sbjct: 993 WFFSIFVGFL 1002
|
|
| TAIR|locus:2168397 AT5G53010 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1220 (434.5 bits), Expect = 3.0e-150, Sum P(3) = 3.0e-150
Identities = 265/552 (48%), Positives = 357/552 (64%)
Query: 333 MTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEK 392
M+VV+ + GG +M D SQL + L++EGIAQNT GSV E EV GSPTE+
Sbjct: 505 MSVVDVWAGGIRMQDMDDVSQLPTFLKELIIEGIAQNTNGSVVFETGVTEPEVYGSPTEQ 564
Query: 393 AILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDS 452
AIL +G KLGM F+ RS V H PFN KK GGVA+QL + H+HWKG+A+ +L S
Sbjct: 565 AILNFGNKLGMKFDDARSASLVRHTIPFNPKKKYGGVALQL-GTHAHVHWKGSAKTILSS 623
Query: 453 CTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWAL 512
C GY+D + ++E K +F+ IE+M+ LRC A+AY+ E +P E
Sbjct: 624 CEGYMDGANNSRAINEQKRKSFEGTIENMSKEGLRCAALAYQPCELGSLPTITE------ 677
Query: 513 PEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEA 572
P + LVLLAIVGIKDPCRP +DAI+LC VKV MVT ++ TA+AIA+ECGILT
Sbjct: 678 PRN-LVLLAIVGIKDPCRPGTRDAIQLCNSGSVKVCMVTDNDGLTAQAIAIECGILT--- 733
Query: 573 DATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVT 632
DA+ NI G FR LS+ +RE+IAG+ I V +SSP+D LLLVQAL+KRG +VA T
Sbjct: 734 DASGRNIRTGAQFRELSDLEREQIAGD----ILVFAQSSPNDNLLLVQALKKRGHIVAAT 789
Query: 633 GDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKF 692
G G +D L EAD+ LAMG+ GT AKE+SD IILDDNFA++VK + W RS+Y N+QK
Sbjct: 790 GMGIHDPKTLREADVSLAMGVGGTAAAKENSDFIILDDNFATIVKCIIWSRSLYNNVQKS 849
Query: 693 IQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDH-LMQR 751
I F+LTV+V+AL + V V PLNAVQ L VNLI+D LGALALA P +DH LM +
Sbjct: 850 ILFRLTVSVSALAVCVVEVVVYDAFPLNAVQFLLVNLIIDILGALALAYRPRSDHHLMGK 909
Query: 752 SPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFN 811
PVG R+PLIT MW ++IQ Y V L+++N +++L L+ ++ K+ NTLIFN
Sbjct: 910 PPVGIRDPLITKTMWSKMIIQVFYLVLSLVLIN--SEKLLKLKHGQTGNAEKMMNTLIFN 967
Query: 812 SFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNW 871
SFV +FNEF + D+ F + + +F+ + T++ QI++I+F G F ++
Sbjct: 968 SFVFYLVFNEFEIQSVDQT--FKEVLRENMFLVTITSTIISQIIVIKFAGIF-----IDL 1020
Query: 872 KHWIISVVIGFI 883
K W+ + ++G +
Sbjct: 1021 KKWVTTSLLGLL 1032
|
|
| TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1318 (469.0 bits), Expect = 2.0e-149, Sum P(2) = 2.0e-149
Identities = 281/535 (52%), Positives = 364/535 (68%)
Query: 280 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAY 339
PEGLPLAVTL+LA++M+++M+D+ALVR L+ACETMGS+T IC+DKTGTLT N M V + +
Sbjct: 408 PEGLPLAVTLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVW 467
Query: 340 VGGRKMNPTDSNSQL--SPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQW 397
+ + N QL S V ++L++ I QNT GS + G+ ++ GSPTE+AIL++
Sbjct: 468 ICENIKERQEENFQLNLSEQVKNILIQAIFQNT-GSEVVKDKEGKTQILGSPTERAILEF 526
Query: 398 GMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYI 457
G+ LG + + R E +L + PFNS KK+ V +V KGA+EIVL C +
Sbjct: 527 GLLLGGDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGASEIVLKMCEKVV 586
Query: 458 DTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDL 517
D++ V + E+K+ + IE AS +LR + + Y D +E R LP
Sbjct: 587 DSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYT--------DLDEAPRGDLPNGGY 638
Query: 518 VLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEP 577
L+A+VGIKDP RP V++A++ C+ AG+ VRMVTGDNI TA+AIA ECGILT+ A
Sbjct: 639 TLVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVA--- 695
Query: 578 NIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTN 637
IEG FR L + I + I VM RS P DK LV LRK G+VVAVTGDGTN
Sbjct: 696 --IEGSDFRNLPPHEMRAILPK----IQVMARSLPLDKHTLVNNLRKMGEVVAVTGDGTN 749
Query: 638 DAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQL 697
DAPALHEADIGLAMGI GTEVAKE++D+II+DDNFA++V V +WGR+VY NIQKF+QFQL
Sbjct: 750 DAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQL 809
Query: 698 TVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRR 757
TVNV AL+INFV+A +G PL AVQLLWVN+IMDTLGALALATEPP + LM+R P+GR
Sbjct: 810 TVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRT 869
Query: 758 EPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLES-DSNAHSNKVK-NTLIF 810
IT MWRN++ Q+ YQ+ VL +LNF GK+ILNL DS N + N+ +F
Sbjct: 870 ASFITRAMWRNIIGQSIYQLIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVF 924
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LF79 | ACA8_ARATH | 3, ., 6, ., 3, ., 8 | 0.7391 | 0.7376 | 0.6126 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.XVIII.392.1 | autoinhibited calcium ATPase (1062 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 892 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-169 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-105 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-104 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 7e-88 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-71 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-71 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 9e-46 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 4e-43 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-42 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 3e-32 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 4e-31 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 4e-30 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 8e-30 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-28 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 4e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 7e-25 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 9e-25 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 4e-20 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 2e-19 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 1e-18 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 2e-16 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 2e-15 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 3e-15 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 6e-15 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 9e-15 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 7e-13 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 2e-12 | |
| pfam12515 | 47 | pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoi | 3e-11 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 6e-10 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 9e-10 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 4e-09 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 3e-07 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-06 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 4e-06 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 1e-05 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-05 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-05 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-04 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.003 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 0.003 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 727 bits (1878), Expect = 0.0
Identities = 311/626 (49%), Positives = 412/626 (65%), Gaps = 24/626 (3%)
Query: 265 IKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDK 324
+ +AVTIVVVAVPEGLPLAVT+ LAYSM+KMM D LVR L+ACETMGSAT ICSDK
Sbjct: 326 LDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDK 385
Query: 325 TGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPN---GG 381
TGTLT N M+VV+ Y+G ++ N D + V ++LVEGI+ N++ GG
Sbjct: 386 TGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSS----SEEVVDRGG 441
Query: 382 EAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIH 441
+ GS TE A+L +G+ L +++ VR+E V+ ++PFNS +K V V+ +
Sbjct: 442 KRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREF 501
Query: 442 WKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERI 501
KGA+EIVL C +D++ + +D IE +AS +LR + +AYR + E
Sbjct: 502 RKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEF 561
Query: 502 PDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAI 561
P R P L L+ +VGIKDP RP V++A++ C+ AG+ VRMVTGDNI TA+AI
Sbjct: 562 P------RKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAI 615
Query: 562 ALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQA 621
A CGILT A +EGK FR+L + + I + V+ RSSP DK LLV
Sbjct: 616 ARNCGILTFGGLA-----MEGKEFRSLVYEEMDPI----LPKLRVLARSSPLDKQLLVLM 666
Query: 622 LRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681
L+ G+VVAVTGDGTNDAPAL AD+G +MGI GTEVAKE+SDII+LDDNFAS+V+ V+W
Sbjct: 667 LKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKW 726
Query: 682 GRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALAT 741
GR+VY NI+KF+QFQLTVNV A+++ FV + S PL AVQLLWVNLIMDTL ALALAT
Sbjct: 727 GRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALAT 786
Query: 742 EPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA-- 799
EPPT+ L+ R P+GR PLI+ MW+N+L QA YQ+ V +L F G I ++
Sbjct: 787 EPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITS 846
Query: 800 HSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQF 859
H NT++FN+FVL Q+FNE NARK E+N+F G+ KNR+F+ I+ T Q++I++F
Sbjct: 847 HQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEF 906
Query: 860 LGKFASTTRLNWKHWIISVVIGFIRL 885
G F ST L+ + WI V++G + L
Sbjct: 907 GGSFFSTVSLSIEQWIGCVLLGMLSL 932
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 514 bits (1327), Expect = e-169
Identities = 226/634 (35%), Positives = 346/634 (54%), Gaps = 32/634 (5%)
Query: 262 DGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTIC 321
+G ++ A+ + V AVPEGLP VT+ LA ++M D A+VR L+A ET+GS IC
Sbjct: 293 NGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVIC 352
Query: 322 SDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGG 381
SDKTGTLT N+MTV + Y+ G + D + + SP + L+ N+ P
Sbjct: 353 SDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVT-----PEKN 407
Query: 382 EAEVSGSPTEKAILQWGMKLGM--NFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVH 439
+G PTE A++++ KLG + + E +L PF+S +KR V V+ +
Sbjct: 408 GWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYI 467
Query: 440 IHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERE 499
+ KGA E++L+ C + L + E+ L T ++A++++AS LR +A+AY+
Sbjct: 468 LFVKGAPEVILERCK----SIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKK---- 519
Query: 500 RIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTAR 559
+ E+ E DLV L + GI+DP R VK+AI R AG+KV M+TGD+++TA
Sbjct: 520 -LDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAI 578
Query: 560 AIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLV 619
AIA ECGI EA+A +I+G ALS+ + E+ E + V R SP K +V
Sbjct: 579 AIAKECGI---EAEAESALVIDGAELDALSDEELAELVEE----LSVFARVSPEQKARIV 631
Query: 620 QALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679
+AL+K G VVA+TGDG NDAPAL AD+G+AMG +GT+ AKE++DI++LDDNFA++V V
Sbjct: 632 EALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAV 691
Query: 680 RWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDV-PLNAVQLLWVNLIMDTLGALA 738
GR VY NI+KFI + L+ NV ++ + ++ + PL +QLLW+NL+ D+L ALA
Sbjct: 692 VEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALA 751
Query: 739 LATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSN 798
L E P +M+R P G E L ++ ++ ++L +L F + + +
Sbjct: 752 LGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLG 811
Query: 799 AHSNKVK-NTLIFNSFVLCQIFNEFNARKPDEKNIFG-GITKNRLFMGIVAVTLVLQILI 856
+ T F VL Q+ R + + N+ + V ++LQ+LI
Sbjct: 812 LDLFQALLQTTAFTVLVLIQLLLTLAVRS-RGRPFLSSLLFSNKYLWLALLVIIILQLLI 870
Query: 857 IQFLGKFAS----TTRLNWKHWIISVVIGFIRLF 886
I FL T L+ W+I++ + + L+
Sbjct: 871 I-FLPPLNLKIFQPTPLSLFEWLIAIAVALLLLY 903
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 347 bits (891), Expect = e-105
Identities = 193/612 (31%), Positives = 319/612 (52%), Gaps = 58/612 (9%)
Query: 265 IKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDK 324
+++ T++V++ V A+PEGLP+ VT+TLA + +M +A+VR+L + ET+GS ICSDK
Sbjct: 272 LEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDK 331
Query: 325 TGTLTLNQMTVVEAY--------VGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTT----- 371
TGTLT N MTV + + + +N ++ +++
Sbjct: 332 TGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLC 391
Query: 372 -GSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVA 430
+ + + G+PT+ A+++ MK G+ + +R + PF+S +K V
Sbjct: 392 NNAKF---RNEADTLLGNPTDVALIELLMKFGL--DDLRETYIRVAEVPFSSERKWMAVK 446
Query: 431 VQLP-NSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCV 489
+ KGA E VL CT Y D + + + + + ++ +MAS+ LR +
Sbjct: 447 CVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVI 506
Query: 490 AIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRM 549
A A + L L +VGI DP RP VK+A+ GV++ M
Sbjct: 507 AFASGP-----------------EKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIM 549
Query: 550 VTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGR 609
+TGD+ +TA +IA G+ + + + G+ A+ + Q +I + + V R
Sbjct: 550 ITGDSQETAVSIARRLGMPSKTSQSVS-----GEKLDAMDDQQLSQIVPK----VAVFAR 600
Query: 610 SSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILD 669
+SP K+ +V+AL+KRGDVVA+TGDG NDAPAL ADIG+AMG GT+VAKE++D+I+ D
Sbjct: 601 ASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTD 660
Query: 670 DNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNL 729
D+FA+++ + G+ ++ NI+ FI FQL+ +VAAL + +A + PLNA+Q+LW+N+
Sbjct: 661 DDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINI 720
Query: 730 IMDTLGALALATEPPTDHLMQRSPVGRREPLIT-NIMWRNLLIQASYQVSVLLVLNFQGK 788
+MD A +L EP +M++ P R + ++T +++ + L+ V L V + +
Sbjct: 721 LMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQ 780
Query: 789 RILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFG-GITKNRLFMGIVA 847
D T+ F FV +FN R K++F G NR+F V
Sbjct: 781 -------DGVI--TARDTTMTFTCFVFFDMFNALACRS-QTKSVFEIGFFSNRMFNYAVG 830
Query: 848 VTLVLQILIIQF 859
+++ Q+L+I F
Sbjct: 831 GSIIGQLLVIYF 842
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 342 bits (880), Expect = e-104
Identities = 215/685 (31%), Positives = 324/685 (47%), Gaps = 85/685 (12%)
Query: 263 GAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICS 322
GAI +AV + V A+PEGLP +T LA RKM A+VR+L + ET+G T ICS
Sbjct: 235 GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICS 294
Query: 323 DKTGTLTLNQMTVVEAY-------------VGGRKMNPTDSNSQLSPMVTSLLVEGIAQN 369
DKTGTLT NQM+V + V G P + V G+ +
Sbjct: 295 DKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEEL 354
Query: 370 TT-------GSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNS 422
T S+ G E G TE A+ K+G+ NS
Sbjct: 355 ATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNS 414
Query: 423 LKK--------------RGGVAVQLPNSEVHIHW-KGAAEIVLDSCTGYIDTDDRLVQMD 467
+ R ++V S + + KGA E VL+ CT ++ D R V +
Sbjct: 415 VWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLT 474
Query: 468 EDKLLTFKKAIEDMASS-SLRCVAIAYRTYERERIPDEEEL------SRWALPEDDLVLL 520
+ T I++M ++ +LRC+A+A++ IPD E + + E DL +
Sbjct: 475 DKMKNTILSVIKEMGTTKALRCLALAFK-----DIPDPREEDLLSDPANFEAIESDLTFI 529
Query: 521 AIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNII 580
+VG+ DP RP V DAI CR AG++V M+TGDN +TA AI GI + + D T +
Sbjct: 530 GVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFT 589
Query: 581 EGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAP 640
G+ F + ++ + R PS K LV+ L+++G++VA+TGDG NDAP
Sbjct: 590 -GREFDEMGPAKQRAACRS----AVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAP 644
Query: 641 ALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVN 700
AL +ADIG+AMG GTEVAKE+SD+++ DDNFA++V V GR++Y N+++FI++ ++ N
Sbjct: 645 ALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSN 703
Query: 701 VAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPL 760
+ +V F+ A L VQLLWVNL+ D L A AL PP +M + P EPL
Sbjct: 704 IGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPL 763
Query: 761 ITNIMWRNLLIQASY----------------------QVSVLLVLNFQGKRILNLESDSN 798
IT ++ L+ Y + S +F+ D
Sbjct: 764 ITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDP-------DCY 816
Query: 799 AHSNKVK-NTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILI- 856
K T+ + V+ ++FN NA D+ + N+ +G + +++ L LI
Sbjct: 817 VFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLIL 876
Query: 857 -IQFLGKFASTTRLNWKHWIISVVI 880
+ FL + T L+ W++ + +
Sbjct: 877 YVPFLSRIFGVTPLSLTDWLMVLKL 901
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 289 bits (743), Expect = 7e-88
Identities = 147/474 (31%), Positives = 222/474 (46%), Gaps = 119/474 (25%)
Query: 266 KILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKT 325
K L A+ ++V+ VP LP AVT+ LA ++ LVR L+A E +G +CSDKT
Sbjct: 189 KALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELGKVDYLCSDKT 248
Query: 326 GTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEV 385
GTLT N+MT+ Y+ G K + + S +
Sbjct: 249 GTLTKNKMTLQGVYIDGGKEDNSSSLV--------------------------ACDNNYL 282
Query: 386 SGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGA 445
SG P EKA+L+ +G + E +L VFPF+S+ KR V V+ P+ + KGA
Sbjct: 283 SGDPMEKALLKSAELVGKADKG-NKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGA 341
Query: 446 AEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEE 505
E +L+ C +++ ++A LR +A A +
Sbjct: 342 PEFILERCN------------------NYEEKYLELARQGLRVLAFASKEL--------- 374
Query: 506 ELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALEC 565
EDDL L ++ +DP RP K+ I + AG+KV M+TGDN+ TA+AIA E
Sbjct: 375 --------EDDLEFLGLITFEDPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKEL 426
Query: 566 GILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKR 625
GI V R SP KL +V+AL+K+
Sbjct: 427 GID-------------------------------------VFARVSPEQKLQIVEALQKK 449
Query: 626 GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSV 685
G +VA+TGDG NDAPAL +AD+G+AMG AK ++DI++LDD+ +++VK V+ GR +
Sbjct: 450 GHIVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDDLSAIVKAVKEGRKI 503
Query: 686 YANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALAL 739
++NI+ I + + N+ + + + V + L++ L ALAL
Sbjct: 504 FSNIKSNIFWAIAYNLILIPLALLLIV--------------IILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 255 bits (652), Expect = 1e-71
Identities = 171/545 (31%), Positives = 279/545 (51%), Gaps = 54/545 (9%)
Query: 274 IVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQM 333
I+V VPEGL VT+ L + ++M LV+ L A ET+GS +TICSDKTGTLT N+M
Sbjct: 301 IIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRM 360
Query: 334 TVVEAYVGGR--KMNPTDSNS-----QLSPMVTSLLVEGIAQNTTGSVYLPPNGG----E 382
TV + + + + T+ S + S +L IA +V+ +
Sbjct: 361 TVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLAL--SRIAGLCNRAVFKAGQENVPILK 418
Query: 383 AEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIH- 441
V+G +E A+L+ + +R + PFNS K + + H
Sbjct: 419 RAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHL 478
Query: 442 --WKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERE 499
KGA E +L+ C+ I + +DE+ F+ A ++ R + + E
Sbjct: 479 LVMKGAPERILERCSS-ILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDE 537
Query: 500 RIP-----DEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDN 554
+ P D ++++ P D+L + ++ + DP R +V DA+ CR AG+KV MVTGD+
Sbjct: 538 QFPEGFQFDTDDVN---FPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDH 594
Query: 555 IQTARAIALECGILTSEADATEPNI--------------------IEGKSFRALSETQRE 594
TA+AIA GI+ SE + T +I + G + ++ Q +
Sbjct: 595 PITAKAIAKGVGII-SEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLD 653
Query: 595 EIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQ 654
EI + V R+SP KL++V+ +++G +VAVTGDG ND+PAL +ADIG+AMGI
Sbjct: 654 EILKYHTEI--VFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIA 711
Query: 655 GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSS 714
G++V+K+++D+I+LDDNFAS+V V GR ++ N++K I + LT N+ + + +++
Sbjct: 712 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIAN 771
Query: 715 GDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRR------EPLITNIMWRN 768
+PL + +L ++L D + A++LA E +M+R P + E LI+ +
Sbjct: 772 IPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQI 831
Query: 769 LLIQA 773
+IQA
Sbjct: 832 GMIQA 836
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 254 bits (650), Expect = 3e-71
Identities = 171/634 (26%), Positives = 284/634 (44%), Gaps = 101/634 (15%)
Query: 261 VDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTI 320
VD + I + + I ++ PE L +++T+A M +VR+L A E +G+ I
Sbjct: 305 VDKEVAIYAICLAISII--PESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDI 362
Query: 321 CSDKTGTLTLNQMTVVEAYV----------GGRKMNPTDSNSQLSPMVTSLLV------- 363
CSDKTGT+T +M + ++ NP + N P +
Sbjct: 363 CSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAAD 422
Query: 364 EGIAQNTTGSVY---LPPN--------------------------GGEAEVSGSPTEKAI 394
+ I + + LP + + G PTE AI
Sbjct: 423 QDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAI 482
Query: 395 LQWGMKLGMNFEAVRSECSVL-----------------------HV--FPFNSLKKRGGV 429
+ K + A+ E +L + FPF+S KR
Sbjct: 483 HVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMAS 542
Query: 430 AVQLPNSEVH-IHWKGAAEIVLDSC-TGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLR 487
+ + E + I+ KGA E +++ C + ++ +++ +E +A+ LR
Sbjct: 543 IYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLR 602
Query: 488 CVAIAYRTYERERIPDEE---ELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAG 544
+A A +++++ D++ E A E DL L ++GI DP R A+ C AG
Sbjct: 603 VLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAG 662
Query: 545 VKVRMVTGDNIQTARAIALECGIL-TSEADATEPN----IIEGKSFRALSETQREEIAGE 599
+ V M+TGD +TA+AIA E GI+ + + ++ G F ALS+ EE+ +
Sbjct: 663 INVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSD---EEV--D 717
Query: 600 DFGMIC-VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV 658
D +C V+ R +P K+ +++AL +R A+TGDG ND+P+L A++G+AMGI G++V
Sbjct: 718 DLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV 777
Query: 659 AKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDV- 717
AK++SDI++ DDNFAS++ + GR ++ NI KF+ L NVA ++ + +
Sbjct: 778 AKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENG 837
Query: 718 ----PLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSP----VG-RREPLITNIMWRN 768
PL+ V++LW +I A+ L E LM R P VG ++ LI ++
Sbjct: 838 KSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYG 897
Query: 769 LLIQASYQVSVLLVLNFQGKRILNLESDSNAHSN 802
+ S S +L G NL D +AH +
Sbjct: 898 FFLGGSCLASFTGIL--YGFGSGNLGHDCDAHYH 929
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 9e-46
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Query: 717 VPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQ 776
+PL +Q+LW+NL+ D L ALAL EPP LM+R P +EPL + + R +L+Q
Sbjct: 2 LPLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLLI 61
Query: 777 VSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGI 836
V L++ F G + A T+ FN+ VL Q+FN NAR G+
Sbjct: 62 AIVTLLVFFLGLLGFGISESGLAQ------TMAFNTLVLSQLFNALNARSLRRSLFKIGL 115
Query: 837 TKNRLFMGIVAVTLVLQILIIQ--FLGKFASTTRLNWKHWIISVVIGFI 883
N+L + V ++L+LQ+LII L TT L+ + W+I + + +
Sbjct: 116 FSNKLLLLAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALV 164
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 4e-43
Identities = 113/455 (24%), Positives = 205/455 (45%), Gaps = 75/455 (16%)
Query: 265 IKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDK 324
+ L A+ ++V +P +P +++T+A ++ KA+V RL+A E + +CSDK
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 325 TGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAE 384
TGTLTLN++++ E + D LL +A
Sbjct: 294 TGTLTLNKLSIDEILPFFNGFDKDDV----------LLYAALASREEDQ----------- 332
Query: 385 VSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNS-EVHIHWK 443
+ A+L L + + VL PF+ + KR V+ P + + K
Sbjct: 333 ---DAIDTAVLGSAKDLKEARDGYK----VLEFVPFDPVDKRTEATVEDPETGKRFKVTK 385
Query: 444 GAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPD 503
GA +++LD C D + + E+K ++++AS R + +A RT E R
Sbjct: 386 GAPQVILDLC----DNKKEIEEKVEEK-------VDELASRGYRALGVA-RTDEEGR--- 430
Query: 504 EEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNI----QTAR 559
W L ++ + DP R K+ I R GV+V+MVTGD++ +TAR
Sbjct: 431 ------WHF-------LGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETAR 477
Query: 560 AIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLV 619
+ L I T++ ++ R + E+ + G V P K +V
Sbjct: 478 RLGLGTNIYTAD-------VLLKGDNRDDLPSGLGEMVEDADGFAEVF----PEHKYEIV 526
Query: 620 QALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQG-TEVAKESSDIIILDDNFASVVKV 678
+ L+KRG +V +TGDG NDAPAL +AD+G+A + G T+ A+ ++DI++ + + +V
Sbjct: 527 EILQKRGHLVGMTGDGVNDAPALKKADVGIA--VAGATDAARSAADIVLTEPGLSVIVDA 584
Query: 679 VRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVS 713
+ R ++ ++ ++ +++ + + + +
Sbjct: 585 ILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILI 619
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 1e-42
Identities = 122/462 (26%), Positives = 213/462 (46%), Gaps = 44/462 (9%)
Query: 271 AVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTL 330
A+ + V PE LP+ V+ LA M K +V+ LSA + G+ +C+DKTGTLT
Sbjct: 290 ALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQ 349
Query: 331 NQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPT 390
+++ + DS+ + S V + + TG + + A++ S
Sbjct: 350 DKIELE---------KHIDSSGETSERVLKMAWLN-SYFQTGWKNVLDHAVLAKLDESAA 399
Query: 391 EKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVL 450
+ +W K+ PF+ ++R V V+ + KGA E +L
Sbjct: 400 RQTASRW-KKVDE--------------IPFDFDRRRLSVVVENRAEVTRLICKGAVEEML 444
Query: 451 DSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRW 510
CT + +V + E + + +M +R +A+A +T + E + ++
Sbjct: 445 TVCT-HKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVG----EADFTK- 498
Query: 511 ALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTS 570
E+ L++ +G DP + S K+AI G+ V+++TGDN I E GI +
Sbjct: 499 -TDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN 557
Query: 571 EADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVA 630
+ + G LS+ EE+A E + R +P K ++ L+K G V
Sbjct: 558 -------DFLLGADIEELSD---EELARE-LRKYHIFARLTPMQKSRIIGLLKKAGHTVG 606
Query: 631 VTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQ 690
GDG NDAPAL +AD+G+++ ++AKE+SDII+L+ + + + V GR+ + NI
Sbjct: 607 FLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNIL 665
Query: 691 KFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMD 732
K+++ + N + VA+ +P+ ++ LL NL+ D
Sbjct: 666 KYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD 707
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 133 bits (338), Expect = 3e-32
Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 48/218 (22%)
Query: 519 LLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPN 578
L+ ++ + D RP K+AI + G+KV M+TGDN +TA AIA E GI A+
Sbjct: 528 LVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELL--- 584
Query: 579 IIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTND 638
P DK +V+ L+ G VA+ GDG ND
Sbjct: 585 ---------------------------------PEDKAEIVRELQAEGRKVAMVGDGIND 611
Query: 639 APALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLT 698
APAL AD+G+AMG GT+VA E++D++++ D+ ++V + + R+ I++ + +
Sbjct: 612 APALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFG 670
Query: 699 VNVAALVINF-------VAAV----SSGDVPLNAVQLL 725
N A+ + +AA+ SS V LNA++LL
Sbjct: 671 YNAIAIPLAAGGLLTPWIAALAMSGSSVLVVLNALRLL 708
|
Length = 713 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 131 bits (331), Expect = 4e-31
Identities = 132/522 (25%), Positives = 191/522 (36%), Gaps = 131/522 (25%)
Query: 303 ALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGG----RKMNP--TDSNSQLSP 356
A VR + E +G I SDKTGTLT N M + + G +L
Sbjct: 345 ASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGS 404
Query: 357 MVTS---LLVEGIAQNTTGSVYL------------------------------PPNGGEA 383
V + +LVE + +G E
Sbjct: 405 YVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEE 464
Query: 384 EV--SGSPTEKAILQWGMKLGMNFE--------------AVRSECSVLHVFPFNSLKKRG 427
+ SP E A+++ +G F E +L+V FNS +KR
Sbjct: 465 ITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRM 524
Query: 428 GVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLR 487
V V+ P+ + + KGA ++ RL K+ +E+ AS LR
Sbjct: 525 SVIVRNPDGRIKLLCKGADTVIFK----------RLSSGGNQVNEETKEHLENYASEGLR 574
Query: 488 CVAIAYRT-----YER--ER-------IPDEEELSRWA--LPEDDLVLLAIVGIKDPCRP 531
+ IAYR YE E + D EE E DL+LL I+D +
Sbjct: 575 TLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQE 634
Query: 532 SVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEA----------DATEPN--- 578
V + I L R AG+K+ ++TGD ++TA I C +L+ DAT
Sbjct: 635 GVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSVEAA 694
Query: 579 -----------------------IIEGKSFR-ALSETQREEIAGEDFGMIC---VMGRSS 611
+I+GKS AL E +E + C + R S
Sbjct: 695 IKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFL--QLALKCKAVICCRVS 752
Query: 612 PSDKLLLVQALRKR-GDVVAVTGDGTNDAPALHEADIGLAMGIQGTE--VAKESSDIIIL 668
PS K +V+ ++K G GDG ND + EAD+G+ GI G E A +SD I
Sbjct: 753 PSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISGKEGMQAVMASDFAI- 809
Query: 669 DDNFASVVKVVRW-GRSVYANIQKFIQFQLTVNVAALVINFV 709
F + K++ GR Y I K I + N+ +I F
Sbjct: 810 -GQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFW 850
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 4e-30
Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 38/190 (20%)
Query: 519 LLAIVGIKDPCRPSVKDAIR-LCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEP 577
LL ++ ++D RP K+AI L R G+K+ M+TGDN A A+A E GI A+
Sbjct: 375 LLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL-- 432
Query: 578 NIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTN 637
P DKL +V+ L++ G VVA+ GDG N
Sbjct: 433 ----------------------------------PEDKLAIVKELQEEGGVVAMVGDGIN 458
Query: 638 DAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQL 697
DAPAL AD+G+AMG G++VA E++DI++L+D+ +S+ + R I++ + + L
Sbjct: 459 DAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWAL 517
Query: 698 TVNVAALVIN 707
N+ A+ +
Sbjct: 518 GYNLVAIPLA 527
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 8e-30
Identities = 86/314 (27%), Positives = 153/314 (48%), Gaps = 19/314 (6%)
Query: 419 PFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAI 478
PF+ ++R V V + KGA E +L+ C+ + + +V +D+ L K+
Sbjct: 448 PFDFERRRMSVVVAENTEHHQLICKGALEEILNVCS-QVRHNGEIVPLDDIMLRRIKRVT 506
Query: 479 EDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIR 538
+ + LR VA+A + E + R E DL+L + DP + + A++
Sbjct: 507 DTLNRQGLRVVAVATK----YLPAREGDYQR--ADESDLILEGYIAFLDPPKETTAPALK 560
Query: 539 LCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAG 598
+ +GV V+++TGD+ A + E G+ +A ++ G LS+ + +A
Sbjct: 561 ALKASGVTVKILTGDSELVAAKVCHEVGL---DAG----EVLIGSDIETLSDDELANLAE 613
Query: 599 EDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV 658
+ R +P K +V L++ G VV GDG NDAPAL ADIG+++ ++
Sbjct: 614 R----TTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDI 668
Query: 659 AKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVP 718
A+E++DII+L+ + + + V GR +AN+ K+I+ + N + VA+ +P
Sbjct: 669 AREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLP 728
Query: 719 LNAVQLLWVNLIMD 732
+ + LL NL+ D
Sbjct: 729 MLPLHLLIQNLLYD 742
|
Length = 902 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 1e-28
Identities = 122/558 (21%), Positives = 215/558 (38%), Gaps = 119/558 (21%)
Query: 266 KILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSAC------ETMGSATT 319
KI+ ++ I+ + VP LP +++ + S+ L ++ C G
Sbjct: 397 KIILRSLDIITIVVPPALPAELSIGINNSL------ARLKKKGIFCTSPFRINFAGKIDV 450
Query: 320 ICSDKTGTLTLNQMTV-----VEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSV 374
C DKTGTLT + + + + K+ DS+ + S +L T
Sbjct: 451 CCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALA--------TCHS 502
Query: 375 YLPPNGGEAEVSGSPTEKAILQ---WGMKLGMNFE-------AVRSEC-----SVLHVFP 419
G ++ G P +K + + W ++ VR++ S++ F
Sbjct: 503 LTKLEG---KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQ 559
Query: 420 FNSLKKRGGVAVQLPNSEVHIHW-KGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAI 478
F+S +R V V + + KGA E + C V D +++ +
Sbjct: 560 FSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLC------SPETVPSD------YQEVL 607
Query: 479 EDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIR 538
+ R +A+AY+ + + ++LSR A+ E +L L + ++P +P K+ I+
Sbjct: 608 KSYTREGYRVLALAYKELPKLTLQKAQDLSRDAV-ESNLTFLGFIVFENPLKPDTKEVIK 666
Query: 539 LCRIAGVKVRMVTGDNIQTARAIALECGIL-------TSEADATE---PNIIE------- 581
+ A ++ M+TGDN TA +A ECGI+ +EA+ E PN I+
Sbjct: 667 ELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSI 726
Query: 582 -------------------------------GKSFRALSETQREEIAGEDFGMIC----V 606
GK+F L E + + V
Sbjct: 727 PFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLL-----RLLSHTTV 781
Query: 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDII 666
R +P K LV+ L+K V + GDG ND AL +AD+G+++ VA +
Sbjct: 782 FARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAEASVA---APFT 838
Query: 667 ILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLW 726
+ + V V+R GR A + F F+ + + V+ + L Q L
Sbjct: 839 SKLASISCVPNVIREGRC--ALVTSFQMFKYMALYSLIQFYSVSILYLIGSNLGDGQFLT 896
Query: 727 VNLIMDTLGALALATEPP 744
++L++ AL ++ P
Sbjct: 897 IDLLLIFPVALLMSRNKP 914
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 4e-25
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 37/188 (19%)
Query: 519 LLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPN 578
L ++ + D +P K+ I+ + G++ M+TGDN +TA+A+A E GI A+
Sbjct: 405 LAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIENVRAEV---- 460
Query: 579 IIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTND 638
P DK L++ L+++G VVA+ GDG ND
Sbjct: 461 --------------------------------LPDDKAALIKKLQEKGKVVAMVGDGIND 488
Query: 639 APALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLT 698
APAL +AD+G+A+G GT+VA E++D+++L ++ V + R I++ + +
Sbjct: 489 APALAQADVGIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFG 547
Query: 699 VNVAALVI 706
NV A+ I
Sbjct: 548 YNVIAIPI 555
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 7e-25
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 44/220 (20%)
Query: 497 ERERIPDEEELSRWALPEDDLVLLAI-------VGIKDPCRPSVKDAIRLCRIAGV-KVR 548
R + +R +V +A + + D RP +AI + G+ KV
Sbjct: 324 GNPRSLEAAVGARPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVV 383
Query: 549 MVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMG 608
M+TGD A +A E GI A+
Sbjct: 384 MLTGDRRAVAERVARELGIDEVHAELL--------------------------------- 410
Query: 609 RSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIIL 668
P DKL +V+ LR++ VA+ GDG NDAPAL AD+G+AMG G++VA E++D+++L
Sbjct: 411 ---PEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLL 467
Query: 669 DDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINF 708
+D+ + + + +R R +++ + L + + +++
Sbjct: 468 NDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLAL 507
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 9e-25
Identities = 94/324 (29%), Positives = 150/324 (46%), Gaps = 35/324 (10%)
Query: 419 PFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAI 478
PF+ +++R V V+ + + KGA E +L T ++ D + +DE +
Sbjct: 446 PFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVAT-HVRDGDTVRPLDEARRERLLALA 504
Query: 479 EDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIR 538
E + R + +A RE E E DLV+ + DP + S AI
Sbjct: 505 EAYNADGFRVLLVA----TREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIA 560
Query: 539 LCRIAGVKVRMVTGDN-IQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIA 597
R GV V+++TGDN I TA+ I E G+ + EP + G A+ +
Sbjct: 561 ALRENGVAVKVLTGDNPIVTAK-ICREVGL-----EPGEP--LLGTEIEAMDDAALAREV 612
Query: 598 GEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTE 657
E V + +P K +++AL+ G V GDG NDAPAL +AD+G+++ G +
Sbjct: 613 EER----TVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGAD 667
Query: 658 VAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVN--------VAALVINFV 709
+AKES+DII+L+ + + + V GR + NI K++ + N VA+ I F
Sbjct: 668 IAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPF- 726
Query: 710 AAVSSGDVPLNAVQLLWVNLIMDT 733
+P+ A+ LL NL+ D
Sbjct: 727 -------LPMLAIHLLLQNLMYDI 743
|
Length = 903 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 4e-20
Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 37/169 (21%)
Query: 515 DDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADA 574
++ +L ++ +KD +P +K+ R G+K M+TGDN TA AIA E G+
Sbjct: 434 ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV------- 486
Query: 575 TEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGD 634
+DF + ++P DKL L++ + G +VA+TGD
Sbjct: 487 ------------------------DDF-----IAEATPEDKLALIRQEQAEGRLVAMTGD 517
Query: 635 GTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGR 683
GTNDAPAL +AD+G+AM GT+ AKE+++++ LD N +++VV G+
Sbjct: 518 GTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGK 565
|
Length = 681 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 93.4 bits (232), Expect = 2e-19
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 519 LLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPN 578
+ ++ +KD + +K+ R G+K M+TGDN TA AIA E G+
Sbjct: 437 IYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV----------- 485
Query: 579 IIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTND 638
+DF + ++P DK+ L++ + G +VA+TGDGTND
Sbjct: 486 --------------------DDF-----IAEATPEDKIALIRQEQAEGKLVAMTGDGTND 520
Query: 639 APALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLT 698
APAL +AD+G+AM GT+ AKE+++++ LD + +++VV G+ + F +
Sbjct: 521 APALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIA 579
Query: 699 VNVAALVINFVAAVSSGDVPLNAVQLL 725
+VA A ++ L A+ ++
Sbjct: 580 NDVAKYFAIIPAIFAAAYPQLQALNIM 606
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 90.6 bits (226), Expect = 1e-18
Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 37/168 (22%)
Query: 515 DDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADA 574
+D +L ++ +KD +P +K+ R G+K M+TGDN TA AIA E G+ A+A
Sbjct: 432 EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAEA 491
Query: 575 TEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGD 634
T P DKL L++ + G +VA+TGD
Sbjct: 492 T------------------------------------PEDKLALIRQEQAEGRLVAMTGD 515
Query: 635 GTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWG 682
GTNDAPAL +AD+G+AM GT+ AKE+ +++ LD N +++VV G
Sbjct: 516 GTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIG 562
|
Length = 679 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 2e-16
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 369 NTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGG 428
N G E+ G PTE A+L + KLG++ E +R+ + PFNS +KR
Sbjct: 4 NDAKFGENEEKNGG-EIIGDPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMS 62
Query: 429 VAVQLP-NSEVHIHWKGAAEIVLDSCTGY 456
+L + + KGA E +L+ C+
Sbjct: 63 TVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 2e-15
Identities = 66/228 (28%), Positives = 108/228 (47%), Gaps = 53/228 (23%)
Query: 515 DDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADA 574
+ +L ++ ++D R + AI + G+K M+TGDN + A AIA E GI
Sbjct: 555 RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI------- 607
Query: 575 TEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGD 634
FRA G++ P DK+ V L + + A+ GD
Sbjct: 608 ---------DFRA--------------GLL-------PEDKVKAVTELNQHAPL-AMVGD 636
Query: 635 GTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQ 694
G NDAPA+ A IG+AMG GT+VA E++D + + + +++ R+ +ANI++
Sbjct: 637 GINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQ--- 692
Query: 695 FQLTVNVA-ALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALAT 741
N+ AL + + V++ L + LW+ ++ D+ GA AL T
Sbjct: 693 -----NITIALGLKAIFLVTT----LLGITGLWLAVLADS-GATALVT 730
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 3e-15
Identities = 75/233 (32%), Positives = 108/233 (46%), Gaps = 62/233 (26%)
Query: 518 VLLAIVG-------IKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTS 570
VLLA+ G I+DP R A++ AG ++ M+TGDN TA AIA E GI
Sbjct: 633 VLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI--- 689
Query: 571 EADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVA 630
E IAG V+ P K ++ L+ +G VA
Sbjct: 690 ----------------------DEVIAG-------VL----PDGKAEAIKRLQSQGRQVA 716
Query: 631 VTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQ 690
+ GDG NDAPAL +AD+G+AMG G++VA E++ I ++ + V + R+ N++
Sbjct: 717 MVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775
Query: 691 K-----FIQFQLTVNVAA---------LVINFVA----AVSSGDVPLNAVQLL 725
+ FI L + +AA L+ VA A+SS V NA +LL
Sbjct: 776 QNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLL 828
|
Length = 834 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 79.0 bits (195), Expect = 6e-15
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 153 VKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILM 212
+G++ LKT+L +G+ L +R +G N P K +SF +W A D TLI+L
Sbjct: 45 AEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLS 104
Query: 213 IAAAASLALGI 223
+AA SL LG+
Sbjct: 105 VAAVVSLVLGL 115
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 78.2 bits (192), Expect = 9e-15
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 37/208 (17%)
Query: 518 VLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEP 577
+L ++ +KD + + + R R G++ M TGDN TA IA E G+
Sbjct: 431 EILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV---------- 480
Query: 578 NIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTN 637
+ F C P DK+ +++ + +G +VA+TGDGTN
Sbjct: 481 ---------------------DRFVAEC-----KPEDKINVIREEQAKGHIVAMTGDGTN 514
Query: 638 DAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQL 697
DAPAL EA++GLAM GT AKE++++I LD N +++VV G+ + F +
Sbjct: 515 DAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSI 573
Query: 698 TVNVAALVINFVAAVSSGDVPLNAVQLL 725
++A A + +N + ++
Sbjct: 574 ANDIAKYFAILPAMFMAAMPAMNHLNIM 601
|
Length = 673 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 64.1 bits (157), Expect = 7e-13
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 148 FSSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLT 207
+ +L V+ + L T+LEKG+ + + +R +G N P KK +S W ++D
Sbjct: 1 WHTLSVEEVLARLGTDLEKGLTEAEAE--ERLEKYGPNELPEKKPKSLWKIFLRQFKDPL 58
Query: 208 LIILMIAAAAS 218
+IIL+IAA S
Sbjct: 59 VIILLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 67.2 bits (165), Expect = 2e-12
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 263 GAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACET 313
++ L A+ ++V A PE LPLAV L LA ++ LV+ LSA ET
Sbjct: 172 DFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|204949 pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoinhibitory domain | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 3e-11
Identities = 24/43 (55%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 33 FSIPRTKDAPIVRLKRWRQAA-LVLNASRRFRYTLDLKKEEEK 74
F IP K++ L+RWRQA LV NA RRFRYT DL K E
Sbjct: 6 FDIP-AKNSSEEALRRWRQAVGLVKNARRRFRYTADLAKRCEA 47
|
This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00689, pfam00122, pfam00702, pfam00690. There is a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important. This family is the N terminal autoinhibitory domain of an endosomal Ca2+-ATPase. Length = 47 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 63.0 bits (153), Expect = 6e-10
Identities = 103/480 (21%), Positives = 170/480 (35%), Gaps = 149/480 (31%)
Query: 306 RRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEG 365
R L+ E +G + SDKTGTLT N+M A + G + + +Q S+ V+G
Sbjct: 442 RALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDG 501
Query: 366 IAQNTTGSVYLPPNGGEAEVSG-------------------------------------- 387
V + P E SG
Sbjct: 502 KILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLM 561
Query: 388 -----SPTEKAILQWGMKLG------------MNFEAVRSECSVLHVFPFNSLKKRGGVA 430
SP E+A++ G ++ R +VL + F+S +KR V
Sbjct: 562 DYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVI 621
Query: 431 VQLPNSEVHIHWKGAAEIVLDSCTGYID--TDDRLVQMDEDKLLTFKKAIEDMASSSLRC 488
+ P+ V + KGA S ID + +++ E L T+ +S LR
Sbjct: 622 LGCPDKTVKVFVKGADT----SMFSVIDRSLNMNVIRATEAHLHTY-------SSLGLRT 670
Query: 489 VAIAYRTYERERIPDEEELSRWALP----------------------EDDLVLLAIVGIK 526
+ + R ++ E +W E++L +L I+
Sbjct: 671 LVVGMREL------NDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIE 724
Query: 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSE--------------- 571
D + V +AI R AG+KV ++TGD +TA +I +LT++
Sbjct: 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCR 784
Query: 572 -------------------------ADATEPN----IIEGKSFRALSETQREE----IAG 598
+ A + II+G S + +++ EE +A
Sbjct: 785 KSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLAS 844
Query: 599 EDFGMICVMGRSSPSDKLLLVQALRKR-GDVVAVTGDGTNDAPALHEADIGLAMGIQGTE 657
+ ++C R +P K +V ++ R D+ GDG ND + AD+G+ GI G E
Sbjct: 845 KCSVVLCC--RVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQE 900
|
Length = 1178 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 9e-10
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 496 YERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNI 555
E + + + DLV+L ++ + DP P ++A++ + AG+K+ ++TGDN
Sbjct: 62 AGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNR 121
Query: 556 QTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDK 615
TA AIA G+ ++ + +G++ V G+ P
Sbjct: 122 LTANAIARLLGL------------------------FDALVSADLYGLVGV-GKPDPKIF 156
Query: 616 LLLVQALRKRGDVVAVTGDGTNDAPALHEAD 646
L ++ L + + V + GDG ND PA A
Sbjct: 157 ELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 4e-09
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 147 PFSSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDL 206
+ +L ++ + + L+T+LEKG+ ++ +R +G N P K S + + +
Sbjct: 3 DWHALSLEEVLERLQTDLEKGLSSEEAA--RRLERYGPNELPPPKKTSPLLRFLRQFHNP 60
Query: 207 TLIILMIAAAASLAL 221
+ IL+ AA S L
Sbjct: 61 LIYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 3e-07
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 253 GKTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACE 312
G TK D + A+ L+VAV + PE LP+ VT TLA K+ K +V+RL A +
Sbjct: 312 GYTK-GDWWEAALFALSVAVGLT----PEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQ 366
Query: 313 TMGSATTICSDKTGTLT 329
G+ +C+DKTGTLT
Sbjct: 367 NFGAMDILCTDKTGTLT 383
|
Length = 902 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 2e-06
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 263 GAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICS 322
GA+ L A+ ++VVA P L LA + + ++ L++ A E + T+
Sbjct: 192 GALGALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVF 251
Query: 323 DKTGTLTLNQMTVVEAYV 340
DKTGTLT + TVV+
Sbjct: 252 DKTGTLTTGKPTVVDIEP 269
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 4e-06
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 268 LTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGT 327
L VAVT++++A P L LA +A + + L++ A E + T+ DKTGT
Sbjct: 235 LEVAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGT 294
Query: 328 LTLNQMTVVEA 338
LT + TV +
Sbjct: 295 LTQGKPTVTDV 305
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 1e-05
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 268 LTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGT 327
L A+ + V PE LP+ V+ LA M K +V+RL+A + G+ +C+DKTGT
Sbjct: 320 LLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGT 379
Query: 328 LT 329
LT
Sbjct: 380 LT 381
|
Length = 903 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 2e-05
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 268 LTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGT 327
L A+ ++V+A P L LA + + + L++ A E + T+ DKTGT
Sbjct: 356 LYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGT 415
Query: 328 LTLNQMTVVEAYV 340
LT + V +
Sbjct: 416 LTEGKPEVTDVVA 428
|
Length = 713 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 2e-05
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 606 VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV---AKES 662
V + P K +++ L+KR + V + G+G ND AL EAD+G+ IQ V +
Sbjct: 73 VFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI-CTIQQEGVPERLLLT 131
Query: 663 SDIIILD 669
+D+++ +
Sbjct: 132 ADVVLKE 138
|
Length = 152 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 1e-04
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 271 AVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTL 330
A+ ++VVA P L ++ ++ L++ +A E + T+ DKTGTLT
Sbjct: 200 ALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTT 259
Query: 331 NQMTVVE 337
+ VV+
Sbjct: 260 GRPKVVD 266
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.003
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 139 RASLASYFPFSSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMF 198
+ ++ P S + + L + L T+ G+ ++V +R +G N P +K RS
Sbjct: 17 PVTSETWHPLSVERNELLLE-LFTSPTTGLSEEEVK--RRLKKYGPNELPEEKKRSLLKK 73
Query: 199 LWEAWQDLTLIILMIAAAASLALGI 223
++D +I+L++AA S +G
Sbjct: 74 FLRQFKDPFIILLLVAALLSAFVGD 98
|
Length = 917 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.003
Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 24/129 (18%)
Query: 531 PSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILT------SEADATEPNIIEGKS 584
P VK+A++ + G+K+ + T + + + E G+ + A EG
Sbjct: 27 PGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLF 86
Query: 585 FRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALR-KRGDVVAVTGDGTNDAPAL- 642
G +G+ +P L ++ L +V+ V GD ND
Sbjct: 87 LG---------------GGPFDIGKPNPDKLLAALKLLGVDPEEVLMV-GDSLNDIEMAK 130
Query: 643 HEADIGLAM 651
+G+A+
Sbjct: 131 AAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 892 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.94 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.92 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.73 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.62 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.47 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.46 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.37 | |
| PF12515 | 47 | CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory d | 99.36 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.91 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.9 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.9 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.88 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.87 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.86 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.85 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.84 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.79 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.76 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.75 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.74 | |
| PLN02887 | 580 | hydrolase family protein | 98.69 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.68 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.64 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.6 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.56 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.56 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.44 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.43 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.36 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.35 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.29 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.24 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.12 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.11 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.1 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.08 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.07 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.0 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.99 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.96 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 97.94 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.91 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.86 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.85 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.84 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.84 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.76 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.73 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.66 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.57 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.52 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.46 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.46 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.3 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.23 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.16 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.15 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.03 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.92 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.87 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.84 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.78 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.76 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.59 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.54 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.54 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.44 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.29 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.27 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.2 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.15 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.09 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.05 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 95.97 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.95 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 95.9 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.81 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.7 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.56 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.48 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.45 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 95.42 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.3 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.28 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.26 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 94.96 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 94.89 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 94.89 | |
| PLN02580 | 384 | trehalose-phosphatase | 94.57 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 94.51 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 94.45 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.43 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.12 | |
| PRK06769 | 173 | hypothetical protein; Validated | 94.06 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.0 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 93.99 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 93.94 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.88 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.79 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 93.75 | |
| PLN02940 | 382 | riboflavin kinase | 93.58 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 93.48 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.17 | |
| PLN02811 | 220 | hydrolase | 93.0 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 92.95 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 92.94 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 92.9 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 92.62 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 92.2 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 92.09 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 91.82 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.62 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 91.29 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 91.18 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 91.12 | |
| PLN03017 | 366 | trehalose-phosphatase | 90.59 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 90.0 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 90.0 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 89.69 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 88.95 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 88.24 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 87.41 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 87.39 | |
| PLN02423 | 245 | phosphomannomutase | 87.3 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 87.17 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 86.18 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 82.92 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 81.23 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 80.44 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 80.22 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 80.08 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-210 Score=1776.98 Aligned_cols=824 Identities=56% Similarity=0.893 Sum_probs=761.8
Q ss_pred CCCCccCCCCCCCchHHhHHHHHHhhhhcccccccccccchhHHHHHHHHHhhhhhHHHHHHHHHHHHhccccccccccc
Q 043305 29 DEGTFSIPRTKDAPIVRLKRWRQAALVLNASRRFRYTLDLKKEEEKLQTLRKIRAHAQAIRAAVLFKEAGEQANGAEKLI 108 (892)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (892)
.+++|..+ .+|++.++++|||.|..++|++|||||++++++.......+++.|++..+++|+.+|+++....++.
T Consensus 3 ~~~~~~~~-~~n~~~~~~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~r~~~r~~~~~~~a~~~~~~~~~~~e~~---- 77 (1034)
T KOG0204|consen 3 LDKDFVVS-MKNSSIEALQRWRLAYIVLEASRRFRFGASLKKLRELMEPRRKIRSAVLVSKAAALFIDAGSRTEYT---- 77 (1034)
T ss_pred cccccccc-cccchhhhhhhhhhhhhhcccchhhccccCHHHHHHHHHHHhhhhhhhcccchhhhhhccccccccc----
Confidence 45566555 6899999999999999999999999999999998876677779999999999999999887652211
Q ss_pred cCCCCCcccCHHHHHhhhccCChhHHHHhCCCcccCCCCcccccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCC
Q 043305 109 AVPSGDFAIGQEQLSIMTRDHNNNALQQFGRASLASYFPFSSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYP 188 (892)
Q Consensus 109 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~ 188 (892)
-+|++|+|.+|++++|.++|+++|| ++||+++|+||+..||+++++|+.+|++.||+|+||
T Consensus 78 ------~~i~~e~l~~i~~~~~~~~L~~~gG-------------v~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p 138 (1034)
T KOG0204|consen 78 ------LGIGAEELVKIVKEHDLKALNAYGG-------------VEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYP 138 (1034)
T ss_pred ------cccCHHHHHHHhhccchhhhhhccC-------------HHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCC
Confidence 2789999999999999999999999 999999999999999999989999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceec----------------------------------------
Q 043305 189 RKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYL---------------------------------------- 228 (892)
Q Consensus 189 ~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~---------------------------------------- 228 (892)
++|+|+||+|+|||++|.||+||++||++|+++|+|++|+
T Consensus 139 ~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~ 218 (1034)
T KOG0204|consen 139 EKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKR 218 (1034)
T ss_pred CCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhh
Confidence 9999999999999999999999999999999999997654
Q ss_pred ------------------------------------Cc------------------------------------------
Q 043305 229 ------------------------------------AG------------------------------------------ 230 (892)
Q Consensus 229 ------------------------------------~g------------------------------------------ 230 (892)
||
T Consensus 219 ~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGs 298 (1034)
T KOG0204|consen 219 NIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGS 298 (1034)
T ss_pred ceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCc
Confidence 11
Q ss_pred -------------------------------------------------------EEEEEEeeccccccccceEEeeccc
Q 043305 231 -------------------------------------------------------VRFVRFFTGHTKNAYGTIQFKAGKT 255 (892)
Q Consensus 231 -------------------------------------------------------vl~~~~~~~~~~~~~~~~~~~~~~~ 255 (892)
||.+||+++.+....++ +..
T Consensus 299 gkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-----~~~ 373 (1034)
T KOG0204|consen 299 GKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-----GTT 373 (1034)
T ss_pred ceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-----Ccc
Confidence 22233444433332211 122
Q ss_pred cccchhhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEE
Q 043305 256 KVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTV 335 (892)
Q Consensus 256 ~~~~~~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V 335 (892)
...+..+.++++|+++||++|||||||||||||++|||+|+|||+||+|||||+||||||++|+||+|||||||+|+|+|
T Consensus 374 ~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtV 453 (1034)
T KOG0204|consen 374 WSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTV 453 (1034)
T ss_pred ccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEE
Confidence 33445788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCcccCCCCCC-CCCCHHHHHHHHHHHHhcCCCccccCCCCC-CccccCChHHHHHHHHHHHcCCChhhhhcccc
Q 043305 336 VEAYVGGRKMNPTDSN-SQLSPMVTSLLVEGIAQNTTGSVYLPPNGG-EAEVSGSPTEKAILQWGMKLGMNFEAVRSECS 413 (892)
Q Consensus 336 ~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~-~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~ 413 (892)
++.|++++.++..... ..+++.+.+++.++|+.|++++++.++.++ +++++|||||+|||.|+.++|++++..|++.+
T Consensus 454 V~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~ 533 (1034)
T KOG0204|consen 454 VQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEK 533 (1034)
T ss_pred EeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhh
Confidence 9999999887743332 469999999999999999999999888765 88999999999999999999999999999999
Q ss_pred eeeeeccccCCceeEEEEecCCCc-EEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEE
Q 043305 414 VLHVFPFNSLKKRGGVAVQLPNSE-VHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIA 492 (892)
Q Consensus 414 i~~~~pF~S~rK~msvvv~~~~~~-~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A 492 (892)
+++++||||.||+|+|+++.++++ | +|||||+|+||++|++|++.+|+.++++++.++.+++.|+.||++||||+|+|
T Consensus 534 v~kv~~FNS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lA 612 (1034)
T KOG0204|consen 534 VVKVYPFNSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLA 612 (1034)
T ss_pred eeEEeccCcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEE
Confidence 999999999999999999988777 6 99999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcC
Q 043305 493 YRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEA 572 (892)
Q Consensus 493 yk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~ 572 (892)
||++..... ++...+.++.++.||+++|++||+||+||||++||+.|++|||+|+|+||||..||+|||.+|||++++.
T Consensus 613 y~df~~~~~-~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~ 691 (1034)
T KOG0204|consen 613 YRDFVAGPD-EEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGG 691 (1034)
T ss_pred eeccccCCC-CCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCC
Confidence 999875411 1122334567889999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeec
Q 043305 573 DATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 573 ~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmg 652 (892)
+ .+++||++||+++++|+++++| +++|+||+||.||+.+|+.|+++||+||+||||+||+||||+||||+|||
T Consensus 692 d---~~~lEG~eFr~~s~ee~~~i~p----kl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMG 764 (1034)
T KOG0204|consen 692 D---FLALEGKEFRELSQEERDKIWP----KLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMG 764 (1034)
T ss_pred c---cceecchhhhhcCHHHHHhhhh----hheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhcc
Confidence 3 6899999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhh
Q 043305 653 IQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMD 732 (892)
Q Consensus 653 i~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d 732 (892)
|+|||+|||+|||||+||||++|+++++|||++|+||+||+|||||+|++|++++|++++..+.+||+++||||||||||
T Consensus 765 IaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMD 844 (1034)
T KOG0204|consen 765 IAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMD 844 (1034)
T ss_pred ccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCcccccccchhHHHHH
Q 043305 733 TLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNS 812 (892)
Q Consensus 733 ~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~~~~~~~~~~~~~T~~F~~ 812 (892)
||+|||||||||+++||+|+|++|++|||++.||+||++|++||++++++++|.|..+|+.++.. ...+.+++|++||+
T Consensus 845 TLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~-~~~~~~~nTiIFNt 923 (1034)
T KOG0204|consen 845 TLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPL-HSPPSVHNTIIFNT 923 (1034)
T ss_pred HHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCC-CCchhhheeeehhH
Confidence 99999999999999999999999999999999999999999999999999999999999876543 23567899999999
Q ss_pred HHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhccccccCChHHHHHHHHHHHHHHHHHhhc
Q 043305 813 FVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFIRLFEHPVL 891 (892)
Q Consensus 813 fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~v~~~~~~f~~~~L~~~~w~~~i~~~~~~l~~~eiv 891 (892)
|||||+||+||+|++++.|+|+|+++|++|++++.+++++|+++++|+|.+|+|+||+|.||++|+++|+++||++.++
T Consensus 924 FV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~i 1002 (1034)
T KOG0204|consen 924 FVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLL 1002 (1034)
T ss_pred HHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999876
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-138 Score=1184.69 Aligned_cols=732 Identities=33% Similarity=0.519 Sum_probs=618.0
Q ss_pred cccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceec-
Q 043305 150 SLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYL- 228 (892)
Q Consensus 150 ~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~- 228 (892)
+.+++++++.+.||+++||+.+ |+.+|++.||.|++|..+.+++|+++++||.|+++.||+++|++|++++.+.|+.
T Consensus 6 ~~~v~e~~~~f~t~~~~GLt~~--ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~~~e~~v 83 (972)
T KOG0202|consen 6 AKSVSEVLAEFGTDLEEGLTSD--EVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLADFDEPFV 83 (972)
T ss_pred cCcHHHHHHHhCcCcccCCCHH--HHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccccee
Confidence 4569999999999999999999 9999999999999999999999999999999999999999999999999988775
Q ss_pred --------------------------------------Cc----------------------------------------
Q 043305 229 --------------------------------------AG---------------------------------------- 230 (892)
Q Consensus 229 --------------------------------------~g---------------------------------------- 230 (892)
+|
T Consensus 84 I~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~sl~iDe 163 (972)
T KOG0202|consen 84 ITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKSLRIDE 163 (972)
T ss_pred eeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeeeeeeec
Confidence 11
Q ss_pred -------------------------------------EEEEE--Eee---c-------------cccccccceE------
Q 043305 231 -------------------------------------VRFVR--FFT---G-------------HTKNAYGTIQ------ 249 (892)
Q Consensus 231 -------------------------------------vl~~~--~~~---~-------------~~~~~~~~~~------ 249 (892)
|..+| .++ | .+..+.+|+|
T Consensus 164 S~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~ 243 (972)
T KOG0202|consen 164 SSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEF 243 (972)
T ss_pred ccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcHHHHHHHH
Confidence 11111 000 0 0111123333
Q ss_pred ---------------Eee--c----cccccchhhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeecc
Q 043305 250 ---------------FKA--G----KTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRL 308 (892)
Q Consensus 250 ---------------~~~--~----~~~~~~~~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l 308 (892)
|.. + ....+.+++.++++|.+||++.|+|||||||+.+|++||.|++||+|+|++||+|
T Consensus 244 G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakknaIVRkL 323 (972)
T KOG0202|consen 244 GKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKKNAIVRKL 323 (972)
T ss_pred HHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhhhhhhhcc
Confidence 000 0 1112345577899999999999999999999999999999999999999999999
Q ss_pred ccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccC-------------CCC----------CCCCCCHHHHHHHHHH
Q 043305 309 SACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMN-------------PTD----------SNSQLSPMVTSLLVEG 365 (892)
Q Consensus 309 ~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~-------------~~~----------~~~~~~~~~~~ll~~~ 365 (892)
+++||||.+++||||||||||+|+|+|.++|+.+.... +.. ......+.+.+++..+
T Consensus 324 PsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~ 403 (972)
T KOG0202|consen 324 PSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEIC 403 (972)
T ss_pred cchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHH
Confidence 99999999999999999999999999999998654221 110 0112344566666666
Q ss_pred HHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhh---------------hhcccceeeeeccccCCceeEEE
Q 043305 366 IAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEA---------------VRSECSVLHVFPFNSLKKRGGVA 430 (892)
Q Consensus 366 i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~---------------~r~~~~i~~~~pF~S~rK~msvv 430 (892)
..||++ .+..++. +.++..|.|||.||..++.+.|+.-.. ....++.+..+||+|+||+|+|.
T Consensus 404 ~lCNda-~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~ 481 (972)
T KOG0202|consen 404 ALCNDA-TVEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVK 481 (972)
T ss_pred Hhhhhh-hhhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEE
Confidence 666654 3433433 677889999999999999999875322 12234566899999999999999
Q ss_pred EecCCC--cEEEEEcCceeeeeccccccccCCC-cccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh-
Q 043305 431 VQLPNS--EVHIHWKGAAEIVLDSCTGYIDTDD-RLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE- 506 (892)
Q Consensus 431 v~~~~~--~~~~~~KGA~e~IL~~C~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~- 506 (892)
+..+.+ ++.+|+|||+|.||++|++++..+| ..+||++..|+.+.+...+|+++||||||+|+++... ..+++.+
T Consensus 482 c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~-~~~~~~~l 560 (972)
T KOG0202|consen 482 CSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPG-QVPDDQDL 560 (972)
T ss_pred EecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcc-cChhhhhh
Confidence 986644 4899999999999999988887776 5599999999999999999999999999999998764 1222211
Q ss_pred --hhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchh
Q 043305 507 --LSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKS 584 (892)
Q Consensus 507 --~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~ 584 (892)
...+...|+||+|+|+|||.||||+||++||+.|++|||+|+|+||||..||++||+++||...+.+ -...+++|.+
T Consensus 561 ~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed-~~~~~~TG~e 639 (972)
T KOG0202|consen 561 NDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED-VSSMALTGSE 639 (972)
T ss_pred cccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc-ccccccchhh
Confidence 2234568999999999999999999999999999999999999999999999999999999876654 4568999999
Q ss_pred hhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhccc
Q 043305 585 FRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSD 664 (892)
Q Consensus 585 ~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaD 664 (892)
|+.|+++|+++... +..||||++|++|.+||+.||++|++|||||||+|||||||.||||||||++||+|||||||
T Consensus 640 fD~ls~~~~~~~~~----~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsD 715 (972)
T KOG0202|consen 640 FDDLSDEELDDAVR----RVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASD 715 (972)
T ss_pred hhcCCHHHHHHHhh----cceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhh
Confidence 99999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCC
Q 043305 665 IIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPP 744 (892)
Q Consensus 665 iil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p 744 (892)
+||.||||++|+.|++|||.+|+||++|+.|+|+.|+.+++..|+++.+..+.||+|+|+||+|++||.+||.+|+.|||
T Consensus 716 MVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~ 795 (972)
T KOG0202|consen 716 MVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPV 795 (972)
T ss_pred cEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHH---HHHHHHhh-hhcccCC-------------CCc-ccccccch
Q 043305 745 TDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVL---LVLNFQGK-RILNLES-------------DSN-AHSNKVKN 806 (892)
Q Consensus 745 ~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~---~~l~~~g~-~~~~~~~-------------~~~-~~~~~~~~ 806 (892)
++|+|+|||+++++++|+...+.+++..++|..+.. |+.+|.+. ....+.. .+. ........
T Consensus 796 D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~ 875 (972)
T KOG0202|consen 796 DPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPL 875 (972)
T ss_pred ChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccc
Confidence 999999999999999999999888888888875433 22233321 0000000 000 01112356
Q ss_pred hHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHH--HHHhhhccccccCChHHHHHHHHHHHHH
Q 043305 807 TLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILI--IQFLGKFASTTRLNWKHWIISVVIGFIR 884 (892)
Q Consensus 807 T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~--v~~~~~~f~~~~L~~~~w~~~i~~~~~~ 884 (892)
||.|..||+...||.+|||+.++.-+..++|+|+||++.+++++++|+++ +++++..|.++||++.+|++.+.+.+-.
T Consensus 876 tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V 955 (972)
T KOG0202|consen 876 TMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPV 955 (972)
T ss_pred eEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhhh
Confidence 99999999999999999999887666679999999999999999999654 7899999999999999999999999999
Q ss_pred HHHHhhc
Q 043305 885 LFEHPVL 891 (892)
Q Consensus 885 l~~~eiv 891 (892)
+++.|++
T Consensus 956 ~i~dEil 962 (972)
T KOG0202|consen 956 IIVDEIL 962 (972)
T ss_pred hhHHHHH
Confidence 9999875
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-127 Score=1188.16 Aligned_cols=751 Identities=46% Similarity=0.739 Sum_probs=644.4
Q ss_pred CCCCcccCHHHHHhhhcc-CChhHHHHhCCCcccCCCCcccccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCC
Q 043305 111 PSGDFAIGQEQLSIMTRD-HNNNALQQFGRASLASYFPFSSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPR 189 (892)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~-~~~~~~~~~gg~~~~~~~~~~~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~ 189 (892)
.+++|++..+|+.++.+. ++.+.|+.||| ++++++.|+||+++||+++++|+++|+++||+|++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~ 80 (941)
T TIGR01517 14 FTDGFDVGVSILTDLTDIFKRAPIYEKLGG-------------AEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPE 80 (941)
T ss_pred cCCCCCCCHHHHHHhcCchhhHHHHHHhCC-------------HHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCC
Confidence 357899999999999976 57899999999 9999999999999999955559999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-------------cceec----------------------------
Q 043305 190 KKGRSFWMFLWEAWQDLTLIILMIAAAASLALGI-------------KTEYL---------------------------- 228 (892)
Q Consensus 190 ~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~-------------~~eg~---------------------------- 228 (892)
++++++|++++++|+|+++++|++|+++|+++|+ |.+|.
T Consensus 81 ~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~ 160 (941)
T TIGR01517 81 KPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLN 160 (941)
T ss_pred CCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999884 23332
Q ss_pred ------------Cc-----------------------------EEEE-E------Eeecccc------------------
Q 043305 229 ------------AG-----------------------------VRFV-R------FFTGHTK------------------ 242 (892)
Q Consensus 229 ------------~g-----------------------------vl~~-~------~~~~~~~------------------ 242 (892)
|| ++-+ . .++|...
T Consensus 161 ~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v 240 (941)
T TIGR01517 161 REKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVV 240 (941)
T ss_pred hccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeE
Confidence 11 1101 0 0000000
Q ss_pred ----------------------------ccccceE---------------------Eeecc----c---ccc-----chh
Q 043305 243 ----------------------------NAYGTIQ---------------------FKAGK----T---KVS-----DAV 261 (892)
Q Consensus 243 ----------------------------~~~~~~~---------------------~~~~~----~---~~~-----~~~ 261 (892)
...++++ |.... . ... ...
T Consensus 241 ~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (941)
T TIGR01517 241 NEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDA 320 (941)
T ss_pred EeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhh
Confidence 0000000 00000 0 000 000
Q ss_pred hhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeC
Q 043305 262 DGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVG 341 (892)
Q Consensus 262 ~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~ 341 (892)
..+.+.+..+++++|++||||||+++|+++++++++|+|+|++||+++++|+||++|+||||||||||+|+|+|++++..
T Consensus 321 ~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 400 (941)
T TIGR01517 321 QTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIG 400 (941)
T ss_pred HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEe
Confidence 13455678889999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CcccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccc
Q 043305 342 GRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFN 421 (892)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~ 421 (892)
+..++..+.....++...+++..++++|+...... ++.+..+..|||+|.||++++.+.|.+....+.++++++.+||+
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~-~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~ 479 (941)
T TIGR01517 401 EQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVV-DRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFN 479 (941)
T ss_pred cceEecCcccccCCHHHHHHHHHHHHhCCCCcccc-CCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccC
Confidence 64443222112233455667777888887653211 11234567899999999999999888887777888899999999
Q ss_pred cCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCC
Q 043305 422 SLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERI 501 (892)
Q Consensus 422 S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~ 501 (892)
|++|+|+++++.+++++++++|||||.|+++|+++++.+|+..++++ .++.+++.+++++++|+||+++|||+++.++.
T Consensus 480 s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~ 558 (941)
T TIGR01517 480 SERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEF 558 (941)
T ss_pred CCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCcccc
Confidence 99999999999777779999999999999999988777888888887 78889999999999999999999999875433
Q ss_pred CchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceec
Q 043305 502 PDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIE 581 (892)
Q Consensus 502 ~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~ 581 (892)
+. ++..|+||+|+|+++++||+|||++++|++||++||+|+|+||||+.||.+||++|||.+++ ..+++
T Consensus 559 ~~------~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~-----~~vi~ 627 (941)
T TIGR01517 559 PR------KDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG-----GLAME 627 (941)
T ss_pred cc------ccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCC-----ceEee
Confidence 21 22357899999999999999999999999999999999999999999999999999998654 37999
Q ss_pred chhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhh
Q 043305 582 GKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE 661 (892)
Q Consensus 582 G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAke 661 (892)
|+++++++++|++++++ +..||||++|+||.++|+.||++|++|||||||+||+||||+||||||||++|+|+||+
T Consensus 628 G~~~~~l~~~el~~~i~----~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~ 703 (941)
T TIGR01517 628 GKEFRRLVYEEMDPILP----KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKE 703 (941)
T ss_pred HHHhhhCCHHHHHHHhc----cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHH
Confidence 99999999999999999 88999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhccc
Q 043305 662 SSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALAT 741 (892)
Q Consensus 662 aaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~ 741 (892)
+||++|+||||++|+++++|||++|+||+|+++|++++|+..+++.+++.++.++.|++++|+||+|+++|.+|+++|++
T Consensus 704 aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~ 783 (941)
T TIGR01517 704 ASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALAT 783 (941)
T ss_pred hCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCc--ccccccchhHHHHHHHHHHHh
Q 043305 742 EPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSN--AHSNKVKNTLIFNSFVLCQIF 819 (892)
Q Consensus 742 e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~~~~~--~~~~~~~~T~~F~~fV~~qvf 819 (892)
|||++++|++||++++++++++.||++++++++|++++.+++++.+..+++..+... .+....++|++|++||++|+|
T Consensus 784 e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~ 863 (941)
T TIGR01517 784 EPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLF 863 (941)
T ss_pred CCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988887777665554332100 112356789999999999999
Q ss_pred hhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhccccccCChHHHHHHHHHHHHHHHHHhhc
Q 043305 820 NEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFIRLFEHPVL 891 (892)
Q Consensus 820 n~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~v~~~~~~f~~~~L~~~~w~~~i~~~~~~l~~~eiv 891 (892)
|.+|+|+.++.++|+++++|++|+.++++++++|++++++++.+|++.||++.+|++|++++++.+++.+++
T Consensus 864 ~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~ 935 (941)
T TIGR01517 864 NEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLL 935 (941)
T ss_pred HHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999977568899999999999999999999999999999999999999999999999999999998864
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-120 Score=1130.52 Aligned_cols=733 Identities=25% Similarity=0.410 Sum_probs=590.9
Q ss_pred ccccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceec
Q 043305 149 SSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYL 228 (892)
Q Consensus 149 ~~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~ 228 (892)
.+++++++++.|+||+++||+++ |+++|+++||+|++++++++|+|++++++|.|+++++|++||++|+++|.|.+|.
T Consensus 8 ~~~~~~~v~~~l~t~~~~GLs~~--ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~~~~~~~ 85 (1053)
T TIGR01523 8 FSDIADEAAEFIGTSIPEGLTHD--EAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMHDWIEGG 85 (1053)
T ss_pred hhCCHHHHHHHhCcCcccCCCHH--HHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhHHHHH
Confidence 46779999999999998999998 8999999999999999999999999999999999999999999999999888875
Q ss_pred ---------------------------------------Cc--------------EEEE----------E----------
Q 043305 229 ---------------------------------------AG--------------VRFV----------R---------- 235 (892)
Q Consensus 229 ---------------------------------------~g--------------vl~~----------~---------- 235 (892)
|| ++.. |
T Consensus 86 iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~L~VD 165 (1053)
T TIGR01523 86 VISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTD 165 (1053)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCceEEE
Confidence 22 0000 0
Q ss_pred --Eeeccc----cc--------cccce------EEee-----c-------------------------------------
Q 043305 236 --FFTGHT----KN--------AYGTI------QFKA-----G------------------------------------- 253 (892)
Q Consensus 236 --~~~~~~----~~--------~~~~~------~~~~-----~------------------------------------- 253 (892)
.++|.. +. .+.++ -|.+ |
T Consensus 166 ES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~ 245 (1053)
T TIGR01523 166 EALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDP 245 (1053)
T ss_pred chhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcccccccccc
Confidence 011100 00 00000 0000 0
Q ss_pred --------------------------cccccch------------------------hhhHHHHHHHHHHHhhhcccCCc
Q 043305 254 --------------------------KTKVSDA------------------------VDGAIKILTVAVTIVVVAVPEGL 283 (892)
Q Consensus 254 --------------------------~~~~~~~------------------------~~~~~~~~~~avtilvvavPegL 283 (892)
.+..... ...+...+..+++++|++|||||
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~av~l~Va~VPegL 325 (1053)
T TIGR01523 246 NKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDVDKEVAIYAICLAISIIPESL 325 (1053)
T ss_pred ccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHcccch
Confidence 0000000 00113455678899999999999
Q ss_pred hhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCc-c---------cCCC-CC--
Q 043305 284 PLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR-K---------MNPT-DS-- 350 (892)
Q Consensus 284 plavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~-~---------~~~~-~~-- 350 (892)
|+++|++|+++++||+|+|++||+++++||||++|+||||||||||+|+|+|+++|+++. . |.+. ..
T Consensus 326 p~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~ 405 (1053)
T TIGR01523 326 IAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVS 405 (1053)
T ss_pred HHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccc
Confidence 999999999999999999999999999999999999999999999999999999998641 1 1110 00
Q ss_pred -------------C--------------C--C-----CCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHH
Q 043305 351 -------------N--------------S--Q-----LSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQ 396 (892)
Q Consensus 351 -------------~--------------~--~-----~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~ 396 (892)
. . . .++...+++..+..||+. .+..+++++.+...|||+|.||++
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a-~~~~~~~~~~~~~~GdptE~ALl~ 484 (1053)
T TIGR01523 406 GIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIA-TVFKDDATDCWKAHGDPTEIAIHV 484 (1053)
T ss_pred cccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCC-eeeccCCCCceeeCcCccHHHHHH
Confidence 0 0 0 012234455555555543 332222223456789999999999
Q ss_pred HHHHcCCChh------hh-------------------hcccceeeeeccccCCceeEEEEecCCC-cEEEEEcCceeeee
Q 043305 397 WGMKLGMNFE------AV-------------------RSECSVLHVFPFNSLKKRGGVAVQLPNS-EVHIHWKGAAEIVL 450 (892)
Q Consensus 397 ~a~~~g~~~~------~~-------------------r~~~~i~~~~pF~S~rK~msvvv~~~~~-~~~~~~KGA~e~IL 450 (892)
++.+.|++.. .. +.++++++.+||||+||||+++++.+++ .+++|+|||||.|+
T Consensus 485 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il 564 (1053)
T TIGR01523 485 FAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERII 564 (1053)
T ss_pred HHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHH
Confidence 9999887531 11 2357899999999999999999986544 48899999999999
Q ss_pred ccccccccCCC-cccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh---hhhccCCCCCcEEEEEEEec
Q 043305 451 DSCTGYIDTDD-RLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE---LSRWALPEDDLVLLAIVGIK 526 (892)
Q Consensus 451 ~~C~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~---~~~~~~~e~~l~~lGlvgi~ 526 (892)
++|+++...+| +..+++++.++.+.+.+++|+++|+||||+|||+++.++...... ....+..|+||+|+|+++++
T Consensus 565 ~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~ 644 (1053)
T TIGR01523 565 ECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIY 644 (1053)
T ss_pred HhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeee
Confidence 99998766555 578999999999999999999999999999999987532211000 00123468999999999999
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC-----CCCCceecchhhhhcCHHHHHHHhcccc
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD-----ATEPNIIEGKSFRALSETQREEIAGEDF 601 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~-----~~~~~vi~G~~~~~l~~~e~~~i~~~~~ 601 (892)
||+|+|++++|++||+|||+|+|+||||+.||.+||++|||.+++.. .....+++|++++.++++++++++.
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~--- 721 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKA--- 721 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhh---
Confidence 99999999999999999999999999999999999999999864211 1134799999999999999999988
Q ss_pred cceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 602 GMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 602 ~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
+..||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||++|+++||++||++++||||++|+++++|
T Consensus 722 -~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~ 800 (1053)
T TIGR01523 722 -LCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEE 800 (1053)
T ss_pred -cCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C--CCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCC
Q 043305 682 GRSVYANIQKFIQFQLTVNVAALVINFVAAVSS---G--DVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGR 756 (892)
Q Consensus 682 GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~---~--~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r 756 (892)
||++|+||+|+++|+|+.|+..+++.+++.+++ + +.||+++|+||+|+++|.+|+++|++|||++++|+|||+.+
T Consensus 801 gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~ 880 (1053)
T TIGR01523 801 GRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDN 880 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCC
Confidence 999999999999999999999999999988874 2 47999999999999999999999999999999999999999
Q ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--cCCCC------cc-cccccchhHHHHHHHHHHHhhhhcccCC
Q 043305 757 REPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILN--LESDS------NA-HSNKVKNTLIFNSFVLCQIFNEFNARKP 827 (892)
Q Consensus 757 ~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~--~~~~~------~~-~~~~~~~T~~F~~fV~~qvfn~~n~R~~ 827 (892)
+++++++.+|+.++.+++++.++.+..++...+.+. ..+.. .. .....++|+.|.+++++|++|.+|||+.
T Consensus 881 ~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~ 960 (1053)
T TIGR01523 881 EVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDF 960 (1053)
T ss_pred CccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999987766554432111110 00000 00 0134578999999999999999999986
Q ss_pred CCccccc----------------CCcchHHHHHHHHHHHHHHHHH--HHHhhh-ccccccCChHHHHHHHHHHHHHHHHH
Q 043305 828 DEKNIFG----------------GITKNRLFMGIVAVTLVLQILI--IQFLGK-FASTTRLNWKHWIISVVIGFIRLFEH 888 (892)
Q Consensus 828 ~~~~~f~----------------~~~~N~~f~~~i~~~~~~qi~~--v~~~~~-~f~~~~L~~~~w~~~i~~~~~~l~~~ 888 (892)
+. ++|+ +.++|+++++.+++++++|+++ +|+++. +|+++||++ +|+++++++++.+++.
T Consensus 961 ~~-~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~ 1038 (1053)
T TIGR01523 961 DN-SFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGA 1038 (1053)
T ss_pred ch-hhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHH
Confidence 53 3332 4689999999888888888654 678885 999999997 8999999999999888
Q ss_pred hh
Q 043305 889 PV 890 (892)
Q Consensus 889 ei 890 (892)
|+
T Consensus 1039 e~ 1040 (1053)
T TIGR01523 1039 EI 1040 (1053)
T ss_pred HH
Confidence 76
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-117 Score=1109.09 Aligned_cols=735 Identities=26% Similarity=0.362 Sum_probs=588.1
Q ss_pred ccccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc------
Q 043305 149 SSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALG------ 222 (892)
Q Consensus 149 ~~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg------ 222 (892)
.+.+.+++.+.|+||+++||+++ |+++|+++||+|++++++++++|++++++|.|++.++|++||++|+++.
T Consensus 18 ~~~~~~~~~~~l~t~~~~GLs~~--e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~ 95 (997)
T TIGR01106 18 HKLSLDELERKYGTDLSKGLSAA--RAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAST 95 (997)
T ss_pred hhCCHHHHHHHhCcCcccCCCHH--HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc
Confidence 45569999999999999999998 8999999999999999999999999999999999999999999988762
Q ss_pred -------ccceec---------------------------------------Cc--------------------------
Q 043305 223 -------IKTEYL---------------------------------------AG-------------------------- 230 (892)
Q Consensus 223 -------~~~eg~---------------------------------------~g-------------------------- 230 (892)
.+.+|+ ||
T Consensus 96 ~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPa 175 (997)
T TIGR01106 96 EEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPA 175 (997)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEee
Confidence 222332 22
Q ss_pred --E-EEEE-------Eeecccc----ccc----cc-----eEEee---------------c-c-----------------
Q 043305 231 --V-RFVR-------FFTGHTK----NAY----GT-----IQFKA---------------G-K----------------- 254 (892)
Q Consensus 231 --v-l~~~-------~~~~~~~----~~~----~~-----~~~~~---------------~-~----------------- 254 (892)
+ +.+. .++|... ... .+ .-|.+ | .
T Consensus 176 D~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 255 (997)
T TIGR01106 176 DLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGK 255 (997)
T ss_pred eEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCC
Confidence 0 1000 0111100 000 00 00000 0 0
Q ss_pred ccccch--------------------------hhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeecc
Q 043305 255 TKVSDA--------------------------VDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRL 308 (892)
Q Consensus 255 ~~~~~~--------------------------~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l 308 (892)
...... ...+.+.+..+++++|++||||||+++|+++++++++|+++|++||++
T Consensus 256 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~ 335 (997)
T TIGR01106 256 TPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNL 335 (997)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCc
Confidence 000000 012345666788899999999999999999999999999999999999
Q ss_pred ccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCC------CCCCCHHHHHHHHHHHHhcCCCccccCCCCC-
Q 043305 309 SACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS------NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGG- 381 (892)
Q Consensus 309 ~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~------~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~- 381 (892)
+++|+||++++||||||||||+|+|+|+++|+++..+..... .........+.+...+++|+++... ++.++
T Consensus 336 ~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~-~~~~~~ 414 (997)
T TIGR01106 336 EAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFK-AGQENV 414 (997)
T ss_pred HHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeec-cccCCC
Confidence 999999999999999999999999999999987765432110 0011112232333444444444321 11111
Q ss_pred ---CccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecC---CCcEEEEEcCceeeeeccccc
Q 043305 382 ---EAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLP---NSEVHIHWKGAAEIVLDSCTG 455 (892)
Q Consensus 382 ---~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~---~~~~~~~~KGA~e~IL~~C~~ 455 (892)
+....|||+|.||++++.+.+.+....+.++++++.+||||+||||+++++.. ++.+++|+|||||.|+++|++
T Consensus 415 ~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~ 494 (997)
T TIGR01106 415 PILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSS 494 (997)
T ss_pred cccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhH
Confidence 24568999999999999987777777888999999999999999999988643 246889999999999999998
Q ss_pred cccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh--hhhccCCCCCcEEEEEEEecCCCchhH
Q 043305 456 YIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE--LSRWALPEDDLVLLAIVGIKDPCRPSV 533 (892)
Q Consensus 456 ~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~--~~~~~~~e~~l~~lGlvgi~DplR~~v 533 (892)
++ .+|+.++++++.++.+.+.+++|+++|+||+|+|||+++.++.+.... .+..+..|+||+|+|+++++||+|+|+
T Consensus 495 ~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v 573 (997)
T TIGR01106 495 IL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAV 573 (997)
T ss_pred Hh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHH
Confidence 76 578889999999999999999999999999999999987543321100 011123488999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC-------------------CCCCceecchhhhhcCHHHHH
Q 043305 534 KDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD-------------------ATEPNIIEGKSFRALSETQRE 594 (892)
Q Consensus 534 ~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~-------------------~~~~~vi~G~~~~~l~~~e~~ 594 (892)
+++|++|+++||+|+|+|||++.||.++|+++||.+++.+ .....+++|++++.++++|++
T Consensus 574 ~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~ 653 (997)
T TIGR01106 574 PDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLD 653 (997)
T ss_pred HHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHH
Confidence 9999999999999999999999999999999999865321 012379999999999999999
Q ss_pred HHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchH
Q 043305 595 EIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFAS 674 (892)
Q Consensus 595 ~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~s 674 (892)
+++++. +..||||++|+||.++|+.||++|++|||||||+||+||||+||||||||++|+|+||++||++|+||||++
T Consensus 654 ~~~~~~--~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~ 731 (997)
T TIGR01106 654 EILKYH--TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731 (997)
T ss_pred HHHHhc--CCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHH
Confidence 998821 225999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCC
Q 043305 675 VVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPV 754 (892)
Q Consensus 675 Iv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~ 754 (892)
|+++++|||++|+||+|+++|+++.|+..+++.++++++..++||+++|+||+|++||++|+++|++|||++++|+|||+
T Consensus 732 Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~ 811 (997)
T TIGR01106 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPR 811 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCccHHHHHHH-HHHHHHHHHHHHHHHHHhhh--------hcccCC--C-----C---cc-----c-----cccc
Q 043305 755 GR-REPLITNIMWRNL-LIQASYQVSVLLVLNFQGKR--------ILNLES--D-----S---NA-----H-----SNKV 804 (892)
Q Consensus 755 ~r-~~~li~~~m~~~i-~~~ai~q~~v~~~l~~~g~~--------~~~~~~--~-----~---~~-----~-----~~~~ 804 (892)
++ .++++++.||..+ +..++++.++.++.++.... .+++.. . + .. . ....
T Consensus 812 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (997)
T TIGR01106 812 NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFT 891 (997)
T ss_pred CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhh
Confidence 85 7899999887664 44466666554444332211 111100 0 0 00 0 0014
Q ss_pred chhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHH--HHHhhhccccccCChHHHHHHHHHHH
Q 043305 805 KNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILI--IQFLGKFASTTRLNWKHWIISVVIGF 882 (892)
Q Consensus 805 ~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~--v~~~~~~f~~~~L~~~~w~~~i~~~~ 882 (892)
++|++|++|+++|+||.+|||+. +.++|++.++|++++.++++.+++++++ +|+++.+|++.||++.+|++|+++++
T Consensus 892 ~~t~~f~~~v~~q~~~~~~~R~~-~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 970 (997)
T TIGR01106 892 CHTAFFVSIVVVQWADLIICKTR-RNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSL 970 (997)
T ss_pred hhHHHHHHHHHHHHHHHHHhccC-cccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHH
Confidence 68999999999999999999995 5578865589999998888888887554 56789999999999999999999999
Q ss_pred HHHHHHhh
Q 043305 883 IRLFEHPV 890 (892)
Q Consensus 883 ~~l~~~ei 890 (892)
+.+++.++
T Consensus 971 ~~~~~~~~ 978 (997)
T TIGR01106 971 LIFVYDEI 978 (997)
T ss_pred HHHHHHHH
Confidence 99998876
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-117 Score=1095.29 Aligned_cols=699 Identities=32% Similarity=0.514 Sum_probs=594.7
Q ss_pred ccccHHHHHHHhcCCCCCCCC-CChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHH-HHHHHHHHHHHHHHHhhccccce
Q 043305 149 SSLQVKGLSDMLKTNLEKGIP-GDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAW-QDLTLIILMIAAAASLALGIKTE 226 (892)
Q Consensus 149 ~~~~~~gl~~~L~t~~~~GL~-~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~-~D~~liIL~vaAvvSl~lg~~~e 226 (892)
..++++++++.|+||+++||+ ++ |+++|+++||+|++++++++|+|++++++| +|++.++|++||++|+++|.|.|
T Consensus 5 ~~~~~~~v~~~l~t~~~~GLs~~~--ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g~~~~ 82 (884)
T TIGR01522 5 CELSVEETCSKLQTDLQNGLNSSQ--EASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMGNIDD 82 (884)
T ss_pred hhCCHHHHHHHhCcCcccCCCcHH--HHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHcchhh
Confidence 456799999999999999999 55 899999999999999999999999999999 99999999999999999999988
Q ss_pred ec---------------------------------------Cc-----------------------------EEEEE---
Q 043305 227 YL---------------------------------------AG-----------------------------VRFVR--- 235 (892)
Q Consensus 227 g~---------------------------------------~g-----------------------------vl~~~--- 235 (892)
|. || ++-+.
T Consensus 83 ~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~ 162 (884)
T TIGR01522 83 AVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLS 162 (884)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCceE
Confidence 75 12 11110
Q ss_pred ----Eeeccc----ccccc-------------ceEEee---------------c------------------cccccch-
Q 043305 236 ----FFTGHT----KNAYG-------------TIQFKA---------------G------------------KTKVSDA- 260 (892)
Q Consensus 236 ----~~~~~~----~~~~~-------------~~~~~~---------------~------------------~~~~~~~- 260 (892)
.++|.. +.... +.-|.+ | .+.....
T Consensus 163 VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~l 242 (884)
T TIGR01522 163 IDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSM 242 (884)
T ss_pred EEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHHHH
Confidence 011100 00000 000000 0 0000000
Q ss_pred -----------------------h--hhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccC
Q 043305 261 -----------------------V--DGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMG 315 (892)
Q Consensus 261 -----------------------~--~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG 315 (892)
+ ..+.+.+.++++++|++||||||+++|++++++++||+|+|++||+++++|+||
T Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg 322 (884)
T TIGR01522 243 DLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLG 322 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhcc
Confidence 0 124567778899999999999999999999999999999999999999999999
Q ss_pred ceeEEEeCCCCCcccCceEEEEEEeCCcccC--------CCCC--------CCCCCHHHHHHHHHHHHhcCCCccccCCC
Q 043305 316 SATTICSDKTGTLTLNQMTVVEAYVGGRKMN--------PTDS--------NSQLSPMVTSLLVEGIAQNTTGSVYLPPN 379 (892)
Q Consensus 316 ~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~--------~~~~--------~~~~~~~~~~ll~~~i~~n~~~~~~~~~~ 379 (892)
++|+||||||||||+|+|+|+++|..+.... +.+. ....++...+++..+..||+.. . ..+
T Consensus 323 ~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~-~~~- 399 (884)
T TIGR01522 323 SVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAK-F-RNE- 399 (884)
T ss_pred CccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCe-e-cCC-
Confidence 9999999999999999999999997653211 0000 0011234445555555555542 1 111
Q ss_pred CCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecC-CCcEEEEEcCceeeeecccccccc
Q 043305 380 GGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLP-NSEVHIHWKGAAEIVLDSCTGYID 458 (892)
Q Consensus 380 ~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~-~~~~~~~~KGA~e~IL~~C~~~~~ 458 (892)
.....|||+|+||++++.+.|++ ..+..++.++.+||+|+||||+++++.. ++++++++|||||.|+.+|++++.
T Consensus 400 --~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~ 475 (884)
T TIGR01522 400 --ADTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQK 475 (884)
T ss_pred --CCCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhh
Confidence 12456999999999999988753 4456788999999999999999998753 567899999999999999999988
Q ss_pred CCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHH
Q 043305 459 TDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIR 538 (892)
Q Consensus 459 ~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~ 538 (892)
.+|...+++++.++.+.+.+++++++|+||+++|||+++ ++|+|+|+++++||+|||++++|+
T Consensus 476 ~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~-----------------~~l~~lGli~l~Dp~r~~~~~~i~ 538 (884)
T TIGR01522 476 KDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEK-----------------GQLTFLGLVGINDPPRPGVKEAVT 538 (884)
T ss_pred cCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCC-----------------CCeEEEEEEeccCcchhHHHHHHH
Confidence 788888999999999999999999999999999998652 479999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHH
Q 043305 539 LCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLL 618 (892)
Q Consensus 539 ~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~l 618 (892)
+||++||+++|+|||+..||.+||++|||..... .+++|++++++++++++++++ +..||||++|+||..+
T Consensus 539 ~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~-----~~v~g~~l~~~~~~~l~~~~~----~~~Vfar~~P~~K~~i 609 (884)
T TIGR01522 539 TLITGGVRIIMITGDSQETAVSIARRLGMPSKTS-----QSVSGEKLDAMDDQQLSQIVP----KVAVFARASPEHKMKI 609 (884)
T ss_pred HHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCC-----ceeEhHHhHhCCHHHHHHHhh----cCeEEEECCHHHHHHH
Confidence 9999999999999999999999999999986432 578999999999999999999 8999999999999999
Q ss_pred HHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 619 VQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLT 698 (892)
Q Consensus 619 V~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt 698 (892)
|+.||++|++|+|||||+||+||||+||||||||.+|+++||++||++++||||++|+++++|||++|+||+|+++|+++
T Consensus 610 v~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~ 689 (884)
T TIGR01522 610 VKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLS 689 (884)
T ss_pred HHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHH
Q 043305 699 VNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVS 778 (892)
Q Consensus 699 ~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~ 778 (892)
.|+..+++.+++.++..+.||+++|+||+|+++|.+|+++|++|||++++|+|||++++++++++.||++++++++++++
T Consensus 690 ~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~ 769 (884)
T TIGR01522 690 TSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVV 769 (884)
T ss_pred hhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHhhhhcccCCCCcccccccchhHHHHHHHHHHHhhhhcccCCCCccccc-CCcchHHHHHHHHHHHHHHHHHH
Q 043305 779 VLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFG-GITKNRLFMGIVAVTLVLQILII 857 (892)
Q Consensus 779 v~~~l~~~g~~~~~~~~~~~~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~-~~~~N~~f~~~i~~~~~~qi~~v 857 (892)
+.+++++... .. + .....++|++|++||++|+||.||||+. +.++|+ ++++|++|++++++++++|++++
T Consensus 770 ~~~~~~~~~~--~~--~----~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 840 (884)
T TIGR01522 770 GTLFVFVREM--QD--G----VITARDTTMTFTCFVFFDMFNALACRSQ-TKSVFEIGFFSNRMFNYAVGGSIIGQLLVI 840 (884)
T ss_pred HHHHHHHHHH--cC--C----cchhhHHHHHHHHHHHHHHHHHHHHccC-CccccccCcccCHHHHHHHHHHHHHHHHHH
Confidence 7665544321 11 1 1124578999999999999999999995 567886 88999999999999999998775
Q ss_pred --HHhhhccccccCChHHHHHHHHHHHHHHHHHhhc
Q 043305 858 --QFLGKFASTTRLNWKHWIISVVIGFIRLFEHPVL 891 (892)
Q Consensus 858 --~~~~~~f~~~~L~~~~w~~~i~~~~~~l~~~eiv 891 (892)
|+++.+|++.||++.+|++|++++++.+++.|+.
T Consensus 841 ~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~ 876 (884)
T TIGR01522 841 YFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIR 876 (884)
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999998863
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-116 Score=1084.94 Aligned_cols=704 Identities=36% Similarity=0.555 Sum_probs=587.5
Q ss_pred HHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccc----ceec--
Q 043305 155 GLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIK----TEYL-- 228 (892)
Q Consensus 155 gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~----~eg~-- 228 (892)
.+...+.++...||+.+ ++.+|++.||.|++++.+..++|..++.+|.|++.++|++++++|..+|.+ .+.+
T Consensus 32 ~~~~~~~~~~~~GLs~~--e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~~~~~I 109 (917)
T COG0474 32 ELLLELFTSPTTGLSEE--EVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDAIVI 109 (917)
T ss_pred hHHHhhcCCcccCCCHH--HHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcceeee
Confidence 88889999999999996 899999999999999999999999999999999999999999999999998 3433
Q ss_pred -------------------------------------Cc-----------------------------EEEEE-------
Q 043305 229 -------------------------------------AG-----------------------------VRFVR------- 235 (892)
Q Consensus 229 -------------------------------------~g-----------------------------vl~~~------- 235 (892)
|| ++...
T Consensus 110 ~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~VdEs 189 (917)
T COG0474 110 LLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDES 189 (917)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCceEEcc
Confidence 12 00000
Q ss_pred Eeeccc----c-------------------------------------------------------ccccceEEeecccc
Q 043305 236 FFTGHT----K-------------------------------------------------------NAYGTIQFKAGKTK 256 (892)
Q Consensus 236 ~~~~~~----~-------------------------------------------------------~~~~~~~~~~~~~~ 256 (892)
.++|.+ + ...++++.......
T Consensus 190 ~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~ 269 (917)
T COG0474 190 ALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLG 269 (917)
T ss_pred cccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHH
Confidence 011100 0 00000000000000
Q ss_pred -----------ccchh------h-hHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCcee
Q 043305 257 -----------VSDAV------D-GAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSAT 318 (892)
Q Consensus 257 -----------~~~~~------~-~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt 318 (892)
.-.++ . ++.+.|..+++++|++||||||+.+|+++++++++|+|++++||+++++|+||+++
T Consensus 270 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~ 349 (917)
T COG0474 270 KFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVD 349 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCcc
Confidence 00000 1 15788999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCcccCceEEEEEEeCC-c-ccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHH
Q 043305 319 TICSDKTGTLTLNQMTVVEAYVGG-R-KMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQ 396 (892)
Q Consensus 319 ~IcsDKTGTLT~n~M~V~~~~~~~-~-~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~ 396 (892)
+||||||||||+|+|+|++++..+ . ..+ +.....++...+++..+..|| +... ..+ + ++..|||||.||++
T Consensus 350 vICsDKTGTLTqN~M~v~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~lc~-~~~~--~~~-~-~~~~gdptE~Al~~ 422 (917)
T COG0474 350 VICSDKTGTLTQNKMTVKKIYINGGGKDID--DKDLKDSPALLRFLLAAALCN-SVTP--EKN-G-WYQAGDPTEGALVE 422 (917)
T ss_pred EEEecCCCCCccCeEEEEEEEeCCCccccc--ccccccchHHHHHHHHHHhcC-cccc--ccc-C-ceecCCccHHHHHH
Confidence 999999999999999999999984 2 111 111122233334444444444 3322 112 2 77899999999999
Q ss_pred HHHHcCC--ChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHH
Q 043305 397 WGMKLGM--NFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTF 474 (892)
Q Consensus 397 ~a~~~g~--~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~ 474 (892)
++.+.|. +....+.++++++.+||||+|||||++++.+++++.+++|||||.|+++|+++ |+..+++++.++.+
T Consensus 423 ~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~ 498 (917)
T COG0474 423 FAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRTL 498 (917)
T ss_pred HHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHHH
Confidence 9999998 88888888999999999999999999999777779999999999999999987 77889999999999
Q ss_pred HHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCC
Q 043305 475 KKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDN 554 (892)
Q Consensus 475 ~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn 554 (892)
++..++|+++|||++++|||..+..+.... . +..|+||+|+|++||+||||+|++++|+.|++|||+|||+||||
T Consensus 499 ~~~~~~la~~glRvla~A~k~~~~~~~~~~----~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~ 573 (917)
T COG0474 499 EEAVKELASEGLRVLAVAYKKLDRAEKDDE----V-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDH 573 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcccccch----h-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCC
Confidence 999999999999999999997764332211 1 45789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCC
Q 043305 555 IQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGD 634 (892)
Q Consensus 555 ~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGD 634 (892)
+.||++||++|||..+... ..+++|.+++.++++|+.+.++ +..||||+||+||.++|+.||++|++||||||
T Consensus 574 ~~TA~aIa~~~Gi~~~~~~---~~vi~G~el~~l~~~el~~~~~----~~~VfARvsP~qK~~IV~~lq~~g~vVamtGD 646 (917)
T COG0474 574 VETAIAIAKECGIEAEAES---ALVIDGAELDALSDEELAELVE----ELSVFARVSPEQKARIVEALQKSGHVVAMTGD 646 (917)
T ss_pred HHHHHHHHHHcCCCCCCCc---eeEeehHHhhhcCHHHHHHHhh----hCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCC
Confidence 9999999999999865421 4699999999999999999999 78899999999999999999999999999999
Q ss_pred CCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043305 635 GTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSS 714 (892)
Q Consensus 635 G~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~ 714 (892)
|+||+||||+||||||||+.|||+||++||+++.||||.+|+.+++|||++|.||+|+++|.++.|+..+++.+++.++.
T Consensus 647 GvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~ 726 (917)
T COG0474 647 GVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFN 726 (917)
T ss_pred CchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CC-CchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 043305 715 GD-VPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNL 793 (892)
Q Consensus 715 ~~-~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~ 793 (892)
.+ .||+++|+||+|+++|++|+++|+.++|+.++|++||+++.++++++..+..++++..++.+++.++.|........
T Consensus 727 ~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~ 806 (917)
T COG0474 727 LFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFI 806 (917)
T ss_pred cccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 77 99999999999999999999999999999999999999999999999988887777777777666655544333221
Q ss_pred CCCCccc-ccccchhHHHHHHHHHHHhhhhcccCCCCccccc-CCcchHHHHHHHHHHHHHHHHHH--HHhh-hcccccc
Q 043305 794 ESDSNAH-SNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFG-GITKNRLFMGIVAVTLVLQILII--QFLG-KFASTTR 868 (892)
Q Consensus 794 ~~~~~~~-~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~-~~~~N~~f~~~i~~~~~~qi~~v--~~~~-~~f~~~~ 868 (892)
....... .....+|+.|++++++|.++.+++|... .++|+ +++.|+.++++++++++++++++ ++.. ..|.+.|
T Consensus 807 ~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~ 885 (917)
T COG0474 807 ANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRG-RPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTP 885 (917)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCC
Confidence 1110011 1456789999999999999999999864 34554 46899999999998888887765 4555 6899999
Q ss_pred CChHHHHHHHHHHHHH
Q 043305 869 LNWKHWIISVVIGFIR 884 (892)
Q Consensus 869 L~~~~w~~~i~~~~~~ 884 (892)
+++.+|++++++....
T Consensus 886 ~~~~~~~~~~~~~~~~ 901 (917)
T COG0474 886 LSLFEWLIAIAVALLL 901 (917)
T ss_pred CcHHHHHHHHHHHHHH
Confidence 9999999998887444
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-111 Score=1042.64 Aligned_cols=681 Identities=22% Similarity=0.295 Sum_probs=550.3
Q ss_pred ccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-----
Q 043305 151 LQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKT----- 225 (892)
Q Consensus 151 ~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~----- 225 (892)
++.+++.+.|+||. +||+++ |+++|+++||+|++|+++++++|++++++|+|+++++|++||++|+++|.+.
T Consensus 30 ~~~~~v~~~l~~~~-~GLs~~--ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~ 106 (903)
T PRK15122 30 NSLEETLANLNTHR-QGLTEE--DAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRG 106 (903)
T ss_pred CCHHHHHHHhCCCC-CCCCHH--HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 34899999999995 699998 8999999999999999999999999999999999999999999999997542
Q ss_pred ------eec---------------------------------------C------c------------------------
Q 043305 226 ------EYL---------------------------------------A------G------------------------ 230 (892)
Q Consensus 226 ------eg~---------------------------------------~------g------------------------ 230 (892)
+++ | |
T Consensus 107 ~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 107 EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 222 3 3
Q ss_pred -----EEEEE-------Eeeccc----ccc---------------c-------cceEEee---------------c-c--
Q 043305 231 -----VRFVR-------FFTGHT----KNA---------------Y-------GTIQFKA---------------G-K-- 254 (892)
Q Consensus 231 -----vl~~~-------~~~~~~----~~~---------------~-------~~~~~~~---------------~-~-- 254 (892)
++-+. .++|.. +.. + +..-|.+ | .
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 00000 011100 000 0 0000000 0 0
Q ss_pred ----------ccccch------------------------------hhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHH
Q 043305 255 ----------TKVSDA------------------------------VDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYS 294 (892)
Q Consensus 255 ----------~~~~~~------------------------------~~~~~~~~~~avtilvvavPegLplavtl~la~~ 294 (892)
...... ..++.+.+.++++++|++||||||+++|++++.|
T Consensus 267 ~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g 346 (903)
T PRK15122 267 FGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKG 346 (903)
T ss_pred hhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 000000 0124567788999999999999999999999999
Q ss_pred HHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCCCCCCHHHHHHHHHHHHhcCCCcc
Q 043305 295 MRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSV 374 (892)
Q Consensus 295 ~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~ 374 (892)
+++|+|+|++||+++++|+||++|+||||||||||+|+|+|++++..+.. .+++ ++..+ +.|+..
T Consensus 347 ~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~---------~~~~---~l~~a-~l~s~~-- 411 (903)
T PRK15122 347 AIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR---------KDER---VLQLA-WLNSFH-- 411 (903)
T ss_pred HHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC---------ChHH---HHHHH-HHhCCC--
Confidence 99999999999999999999999999999999999999999998742210 0122 22222 223211
Q ss_pred ccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeecccc
Q 043305 375 YLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCT 454 (892)
Q Consensus 375 ~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~ 454 (892)
+ ...|||+|.||++++.+.+.+ ..+.+++.++.+||+|.+|+|+++++..++++++++|||||.|+++|+
T Consensus 412 ---~-----~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~ 481 (903)
T PRK15122 412 ---Q-----SGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVAT 481 (903)
T ss_pred ---C-----CCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhch
Confidence 1 126899999999999887643 234567889999999999999999987677889999999999999999
Q ss_pred ccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHH
Q 043305 455 GYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVK 534 (892)
Q Consensus 455 ~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~ 534 (892)
++. .+|+..+++++.++++.+.+++++++|+|++++|||+++.++... ...+..|+|++|+|+++++||+|||++
T Consensus 482 ~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~----~~~~~~e~~l~~lGli~l~Dp~R~~a~ 556 (903)
T PRK15122 482 HVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRA----QYSTADERDLVIRGFLTFLDPPKESAA 556 (903)
T ss_pred hhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccc----ccccccccCcEEEEEEeccCccHHHHH
Confidence 875 467788999999999999999999999999999999886432110 011235789999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhh
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSD 614 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~d 614 (892)
++|++||++||+|+|+||||+.||.+||++|||.. ..+++|+++++++++|+.+.++ +..||||++|+|
T Consensus 557 ~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~-------~~vi~G~el~~~~~~el~~~v~----~~~VfAr~sPe~ 625 (903)
T PRK15122 557 PAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP-------GEPLLGTEIEAMDDAALAREVE----ERTVFAKLTPLQ 625 (903)
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC-------CCccchHhhhhCCHHHHHHHhh----hCCEEEEeCHHH
Confidence 99999999999999999999999999999999952 2589999999999999999999 889999999999
Q ss_pred HHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHH
Q 043305 615 KLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQ 694 (892)
Q Consensus 615 K~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~ 694 (892)
|.++|+.||++|++|||||||+||+||||+|||||||| +|||+||++||+||+||||++|+++++|||++|+||+||++
T Consensus 626 K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~ 704 (903)
T PRK15122 626 KSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLN 704 (903)
T ss_pred HHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHH
Q 043305 695 FQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQAS 774 (892)
Q Consensus 695 f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai 774 (892)
|+++.|+..++..+++.++..+.|++|+|+||+|++||+ |+++|++|||++++| |||++++++++++.|+...+..++
T Consensus 705 ~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~~g~~~~~ 782 (903)
T PRK15122 705 MTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLWIGPTSSI 782 (903)
T ss_pred HHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHHHHHHHHH
Confidence 999999999988888877777799999999999999995 999999999999999 999999999999988754333333
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCcccccccchhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHH
Q 043305 775 YQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQI 854 (892)
Q Consensus 775 ~q~~v~~~l~~~g~~~~~~~~~~~~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi 854 (892)
+.++.+++ .++ .+.. +. .......+|..|.+++++|+||.||+|+.+. ++ |+|++.+..+++++++|+
T Consensus 783 ~~~~~~~~-~~~---~~~~-~~--~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~~-~~----~~~~~~~~~~~~~~~~~~ 850 (903)
T PRK15122 783 FDITTFAL-MWF---VFAA-NS--VEMQALFQSGWFIEGLLSQTLVVHMLRTQKI-PF----IQSTAALPVLLTTGLIMA 850 (903)
T ss_pred HHHHHHHH-HHH---Hhcc-Cc--HhhhhhhHHHHHHHHHHHHHHHHHhhCcCCC-Cc----CcchHHHHHHHHHHHHHH
Confidence 33322222 221 1111 10 0001134688899999999999999998632 33 456655555556666665
Q ss_pred H--HHHH--hhhccccccCChHHHHHHHHHHHHHHHHHhh
Q 043305 855 L--IIQF--LGKFASTTRLNWKHWIISVVIGFIRLFEHPV 890 (892)
Q Consensus 855 ~--~v~~--~~~~f~~~~L~~~~w~~~i~~~~~~l~~~ei 890 (892)
+ ++++ ++.+|+++||++.+|+++++++++.+++.|+
T Consensus 851 ~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~ 890 (903)
T PRK15122 851 IGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQG 890 (903)
T ss_pred HHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4 4565 7999999999999999999999988888765
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-109 Score=1023.70 Aligned_cols=672 Identities=23% Similarity=0.328 Sum_probs=537.0
Q ss_pred ccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceec--
Q 043305 151 LQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYL-- 228 (892)
Q Consensus 151 ~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~-- 228 (892)
++.+++.+.|+|+.+ ||+++ |+++|+++||+|++|+++++++|+++|++|.|++.++|++||++|+++|.+.++.
T Consensus 52 ~~~~~v~~~l~~~~~-GLs~~--ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~~~~~a~~I 128 (902)
T PRK10517 52 MPEEELWKTFDTHPE-GLNEA--EVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATEDLFAAGVI 128 (902)
T ss_pred CCHHHHHHHhCCCCC-CCCHH--HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 458999999999984 99988 8999999999999999999999999999999999999999999999999876664
Q ss_pred -------------------------------------C------c-----------------------------EEEEE-
Q 043305 229 -------------------------------------A------G-----------------------------VRFVR- 235 (892)
Q Consensus 229 -------------------------------------~------g-----------------------------vl~~~- 235 (892)
| | ++-+.
T Consensus 129 ~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~ 208 (902)
T PRK10517 129 ALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD 208 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc
Confidence 3 4 00010
Q ss_pred ------Eeecccc---ccccc-------------eEEee---------------------------------ccccccch
Q 043305 236 ------FFTGHTK---NAYGT-------------IQFKA---------------------------------GKTKVSDA 260 (892)
Q Consensus 236 ------~~~~~~~---~~~~~-------------~~~~~---------------------------------~~~~~~~~ 260 (892)
.++|... ...+. .-|.+ ........
T Consensus 209 l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~ 288 (902)
T PRK10517 209 LFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQG 288 (902)
T ss_pred eEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHH
Confidence 0111000 00000 00000 00000000
Q ss_pred --------------------------hhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeecccccccc
Q 043305 261 --------------------------VDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETM 314 (892)
Q Consensus 261 --------------------------~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~Etl 314 (892)
...+.+.+.++++++|++||||||+++|+++++|+++|+|+|++||+++++|+|
T Consensus 289 ~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~l 368 (902)
T PRK10517 289 ISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNF 368 (902)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhc
Confidence 012456778899999999999999999999999999999999999999999999
Q ss_pred CceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHH
Q 043305 315 GSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAI 394 (892)
Q Consensus 315 G~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~AL 394 (892)
|++|+||||||||||+|+|+|.+++... . .++ .+++. ..+.|+.. . ...|||+|.|+
T Consensus 369 g~v~vic~DKTGTLT~n~m~V~~~~~~~------~----~~~--~~ll~-~a~l~~~~----~------~~~~~p~d~Al 425 (902)
T PRK10517 369 GAMDILCTDKTGTLTQDKIVLENHTDIS------G----KTS--ERVLH-SAWLNSHY----Q------TGLKNLLDTAV 425 (902)
T ss_pred cCCCEEEecCCCccccceEEEEEEecCC------C----CCH--HHHHH-HHHhcCCc----C------CCCCCHHHHHH
Confidence 9999999999999999999999864210 0 011 12222 23334321 1 11589999999
Q ss_pred HHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHH
Q 043305 395 LQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTF 474 (892)
Q Consensus 395 l~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~ 474 (892)
+.++.+.+ ....+..++.++.+||||++|+|+++++..++.+++++|||||.|+++|+++. .+|+..+++++.++.+
T Consensus 426 l~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i 502 (902)
T PRK10517 426 LEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVR-HNGEIVPLDDIMLRRI 502 (902)
T ss_pred HHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhh-cCCCeecCCHHHHHHH
Confidence 99987543 12334567888999999999999999987677788999999999999999875 4667789999999999
Q ss_pred HHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCC
Q 043305 475 KKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDN 554 (892)
Q Consensus 475 ~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn 554 (892)
.+.+++++++|+||+++|||+++.++.. .....|+|++|+|+++++||+|||++++|++||++||+|+|+||||
T Consensus 503 ~~~~~~~a~~G~rvlavA~k~~~~~~~~------~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~ 576 (902)
T PRK10517 503 KRVTDTLNRQGLRVVAVATKYLPAREGD------YQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDS 576 (902)
T ss_pred HHHHHHHHhcCCEEEEEEEecCCccccc------cccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCC
Confidence 9999999999999999999988643211 0112378999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCC
Q 043305 555 IQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGD 634 (892)
Q Consensus 555 ~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGD 634 (892)
+.||.+||++|||.. ..+++|+++++++++|+++.++ +..||||++|+||.++|+.||++|++||||||
T Consensus 577 ~~tA~~IA~~lGI~~-------~~v~~G~el~~l~~~el~~~~~----~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GD 645 (902)
T PRK10517 577 ELVAAKVCHEVGLDA-------GEVLIGSDIETLSDDELANLAE----RTTLFARLTPMHKERIVTLLKREGHVVGFMGD 645 (902)
T ss_pred HHHHHHHHHHcCCCc-------cCceeHHHHHhCCHHHHHHHHh----hCcEEEEcCHHHHHHHHHHHHHCCCEEEEECC
Confidence 999999999999952 2689999999999999999999 88999999999999999999999999999999
Q ss_pred CCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043305 635 GTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSS 714 (892)
Q Consensus 635 G~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~ 714 (892)
|+||+||||+|||||||| +|||+||++||+||+||||++|++++++||++|+||+|+++|+++.|+..++..++++++.
T Consensus 646 GvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~ 724 (902)
T PRK10517 646 GINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL 724 (902)
T ss_pred CcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 999999999999999999 9999999999999999999999999999999999999999999999999999998888776
Q ss_pred CCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC
Q 043305 715 GDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLE 794 (892)
Q Consensus 715 ~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~ 794 (892)
.+.||+|+|+||+|+++| ++++||++|||++++|+|||+. +...+ ++.++..+++..++.+..++..+..++..
T Consensus 725 ~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~-~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 798 (902)
T PRK10517 725 PFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRW-NPADL----GRFMVFFGPISSIFDILTFCLMWWVFHAN 798 (902)
T ss_pred hhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCC-CHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 568999999999999999 7899999999999999999983 22223 33344444444333222222222222211
Q ss_pred CCCcccccccchhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHH--HH--HhhhccccccCC
Q 043305 795 SDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILI--IQ--FLGKFASTTRLN 870 (892)
Q Consensus 795 ~~~~~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~--v~--~~~~~f~~~~L~ 870 (892)
. .......+|..|.+++++|+|+.+|+|+.+. ++++|++.+..++++++++++. ++ +++.+|+++||+
T Consensus 799 ~---~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~ 870 (902)
T PRK10517 799 T---PETQTLFQSGWFVVGLLSQTLIVHMIRTRRI-----PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALP 870 (902)
T ss_pred c---hhhHhHHHHHHHHHHHHHHHHHHHhhccCCC-----CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCC
Confidence 0 0001124455699999999999999998532 4557777777777777776544 45 678999999999
Q ss_pred --hHHHHHHHHHHHH
Q 043305 871 --WKHWIISVVIGFI 883 (892)
Q Consensus 871 --~~~w~~~i~~~~~ 883 (892)
+..|+++++++++
T Consensus 871 ~~~~~~~~~~~~~~~ 885 (902)
T PRK10517 871 LSYFPWLVAILAGYM 885 (902)
T ss_pred hhHHHHHHHHHHHHH
Confidence 7889888888777
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-108 Score=1013.68 Aligned_cols=677 Identities=23% Similarity=0.309 Sum_probs=541.3
Q ss_pred ccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceec--
Q 043305 151 LQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYL-- 228 (892)
Q Consensus 151 ~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~-- 228 (892)
.+.+++++.|+|+. +||+++ |+++|+++||+|++++++++++|++++++|.|++.++|++|+++|+++|.+.+++
T Consensus 18 ~~~~~~~~~l~~~~-~GLs~~--ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~~~~~~~iI 94 (867)
T TIGR01524 18 MGKETLLRKLGVHE-TGLTNV--EVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTDDLEATVII 94 (867)
T ss_pred CCHHHHHHHhCCCC-CCCCHH--HHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHh
Confidence 45899999999987 599988 8999999999999999999999999999999999999999999999999876664
Q ss_pred ------------------------------------C-------c-----------------------------EEEEE-
Q 043305 229 ------------------------------------A-------G-----------------------------VRFVR- 235 (892)
Q Consensus 229 ------------------------------------~-------g-----------------------------vl~~~- 235 (892)
. | ++-+.
T Consensus 95 ~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~ 174 (867)
T TIGR01524 95 ALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD 174 (867)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc
Confidence 1 2 00000
Q ss_pred ------Eeeccccc---cccc-------------eEEee--------------------------------cccccc---
Q 043305 236 ------FFTGHTKN---AYGT-------------IQFKA--------------------------------GKTKVS--- 258 (892)
Q Consensus 236 ------~~~~~~~~---~~~~-------------~~~~~--------------------------------~~~~~~--- 258 (892)
.++|.... ..+. .-|.+ ......
T Consensus 175 l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~t~lq~~~ 254 (867)
T TIGR01524 175 LFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFDKGV 254 (867)
T ss_pred eEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCCCCcHHHHH
Confidence 01110000 0000 00000 000000
Q ss_pred -c----------------------hhhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccC
Q 043305 259 -D----------------------AVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMG 315 (892)
Q Consensus 259 -~----------------------~~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG 315 (892)
. ....+.+.+..+++++|++||||||+++|++++.|++||+|+|++||+++++|+||
T Consensus 255 ~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg 334 (867)
T TIGR01524 255 KSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFG 334 (867)
T ss_pred HHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhcc
Confidence 0 00124567888999999999999999999999999999999999999999999999
Q ss_pred ceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHH
Q 043305 316 SATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAIL 395 (892)
Q Consensus 316 ~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl 395 (892)
++|+||||||||||+|+|+|++++.... .+. .+++..+ ++|+.. . ...+||+|.|++
T Consensus 335 ~v~vic~DKTGTLT~~~m~v~~~~~~~~----------~~~--~~~l~~a-~l~~~~----~------~~~~~p~~~Al~ 391 (867)
T TIGR01524 335 AMDILCTDKTGTLTQDKIELEKHIDSSG----------ETS--ERVLKMA-WLNSYF----Q------TGWKNVLDHAVL 391 (867)
T ss_pred CccEEEecCCCccccCeEEEEEEecCCC----------CCH--HHHHHHH-HHhCCC----C------CCCCChHHHHHH
Confidence 9999999999999999999998763111 011 1222222 334321 0 125799999999
Q ss_pred HHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHH
Q 043305 396 QWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFK 475 (892)
Q Consensus 396 ~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~ 475 (892)
+++.+.. ....+..++.++.+||||++|+|+++++.+++.+++++|||||.|+++|+++. .+|...+++++.+++++
T Consensus 392 ~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~ 468 (867)
T TIGR01524 392 AKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQ 468 (867)
T ss_pred HHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhh-cCCceecCCHHHHHHHH
Confidence 9987542 23345577889999999999999999986666688999999999999999774 46777899999999999
Q ss_pred HHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCH
Q 043305 476 KAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNI 555 (892)
Q Consensus 476 ~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~ 555 (892)
+.+++++++|+||+++|||+++.++.. ..+..|++|+|+|+++++||+|||++++|++||++||+|+|+||||+
T Consensus 469 ~~~~~~a~~G~rvlavA~~~~~~~~~~------~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~ 542 (867)
T TIGR01524 469 DMTAEMNRQGIRVIAVATKTLKVGEAD------FTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNE 542 (867)
T ss_pred HHHHHHHhcCCEEEEEEEeccCccccc------ccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCH
Confidence 999999999999999999988653211 01123689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCC
Q 043305 556 QTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDG 635 (892)
Q Consensus 556 ~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG 635 (892)
.||++||+++||.++ .+++|.++++++++|+.+.++ +..||||++|+||.++|+.||++|++|||||||
T Consensus 543 ~tA~aIA~~lGI~~~-------~v~~g~~l~~~~~~el~~~~~----~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDG 611 (867)
T TIGR01524 543 IVTARICQEVGIDAN-------DFLLGADIEELSDEELARELR----KYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDG 611 (867)
T ss_pred HHHHHHHHHcCCCCC-------CeeecHhhhhCCHHHHHHHhh----hCeEEEECCHHHHHHHHHHHHhCCCEEEEECCC
Confidence 999999999999632 589999999999999999999 889999999999999999999999999999999
Q ss_pred CCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 043305 636 TNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSG 715 (892)
Q Consensus 636 ~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~ 715 (892)
+||+||||+|||||||| +|||+||++||+||+||||++|+++++|||++|+||+|+++|+++.|+..++..+++.++..
T Consensus 612 vNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~ 690 (867)
T TIGR01524 612 INDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIP 690 (867)
T ss_pred cccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Confidence 99999999999999999 99999999999999999999999999999999999999999999999999998888888776
Q ss_pred CCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCC
Q 043305 716 DVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLES 795 (892)
Q Consensus 716 ~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~~ 795 (892)
+.||+++|+||+|++|| +|++||++|||++++|++||+ ++++.+. +.++..+++..++.+..++..+..+...+
T Consensus 691 ~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 764 (867)
T TIGR01524 691 FLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMG----RFMLCIGPVSSIFDIATFLLMWFVFSANT 764 (867)
T ss_pred hhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHH----HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 69999999999999999 799999999999999987776 6665444 34444555443332222221111111111
Q ss_pred CCcccccccchhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHHH--HH--hhhccccccC--
Q 043305 796 DSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILII--QF--LGKFASTTRL-- 869 (892)
Q Consensus 796 ~~~~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~v--~~--~~~~f~~~~L-- 869 (892)
. ......+|..|.+++++|++|.||+|+.+. ++|+|++.+..+++++++|++++ ++ ++.+|+++||
T Consensus 765 ~---~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~-----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~ 836 (867)
T TIGR01524 765 V---EEQALFQSGWFVVGLLSQTLVVHMIRTEKI-----PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPL 836 (867)
T ss_pred h---hhhhHHHHHHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCc
Confidence 0 011234788899999999999999997532 45578888888888888886654 45 4889999987
Q ss_pred ChHHHHHHHHHHHHHHHHHhh
Q 043305 870 NWKHWIISVVIGFIRLFEHPV 890 (892)
Q Consensus 870 ~~~~w~~~i~~~~~~l~~~ei 890 (892)
++..|+++++++++ ++.|+
T Consensus 837 ~~~~~~~~~~~~~~--~~~e~ 855 (867)
T TIGR01524 837 SYFPWLIAILVGYM--ATMQL 855 (867)
T ss_pred cHHHHHHHHHHHHH--HHHHH
Confidence 66788888887776 44443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-108 Score=1015.51 Aligned_cols=622 Identities=33% Similarity=0.518 Sum_probs=528.1
Q ss_pred hhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeC
Q 043305 262 DGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVG 341 (892)
Q Consensus 262 ~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~ 341 (892)
..+...+..++++++++||||||+++|+++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..
T Consensus 234 ~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~ 313 (917)
T TIGR01116 234 QGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVAL 313 (917)
T ss_pred HHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEec
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred Ccc-------------cCCCCCC-------CCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHc
Q 043305 342 GRK-------------MNPTDSN-------SQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKL 401 (892)
Q Consensus 342 ~~~-------------~~~~~~~-------~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~ 401 (892)
+.. +++.... ....+...+.+..+.+.|+++....+++++.++..|||+|.||++++.+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~ 393 (917)
T TIGR01116 314 DPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKM 393 (917)
T ss_pred CCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHc
Confidence 531 1110000 00011222333334444444443222222334557999999999999998
Q ss_pred CCChhh----------------hhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccc
Q 043305 402 GMNFEA----------------VRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQ 465 (892)
Q Consensus 402 g~~~~~----------------~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~ 465 (892)
|.+... .++++++++.+||||+||||+|+++. ++++++|+|||||.|+++|++++..+|...|
T Consensus 394 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~ 472 (917)
T TIGR01116 394 GLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVP 472 (917)
T ss_pred CCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeee
Confidence 876543 24567899999999999999999985 4668999999999999999999887888899
Q ss_pred cCHHHHHHHHHHHHHHHh-ccCeEEEEEEeccccCCCCc-hhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhC
Q 043305 466 MDEDKLLTFKKAIEDMAS-SSLRCVAIAYRTYERERIPD-EEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIA 543 (892)
Q Consensus 466 l~~~~~~~~~~~i~~~a~-~glR~l~~Ayk~~~~~~~~~-~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~A 543 (892)
++++.++++++.+++|++ +|+||+++|||+++.+.... .......+..|+||+|+|+++++||+|++++++|++||+|
T Consensus 473 l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~a 552 (917)
T TIGR01116 473 LTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTA 552 (917)
T ss_pred CCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHC
Confidence 999999999999999999 99999999999986432110 0001122446899999999999999999999999999999
Q ss_pred CCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHH
Q 043305 544 GVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALR 623 (892)
Q Consensus 544 GI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq 623 (892)
||+++|+|||+..||.+||+++||..++.+ ....+++|+++.+++++++.+... +..||||++|+||.++|+.+|
T Consensus 553 GI~v~miTGD~~~tA~~ia~~~gi~~~~~~-v~~~~~~g~~l~~~~~~~~~~~~~----~~~v~ar~~P~~K~~iV~~lq 627 (917)
T TIGR01116 553 GIRVIMITGDNKETAEAICRRIGIFSPDED-VTFKSFTGREFDEMGPAKQRAACR----SAVLFSRVEPSHKSELVELLQ 627 (917)
T ss_pred CCEEEEecCCCHHHHHHHHHHcCCCCCCcc-ccceeeeHHHHhhCCHHHHHHhhh----cCeEEEecCHHHHHHHHHHHH
Confidence 999999999999999999999999865321 113578999999999999988887 889999999999999999999
Q ss_pred HcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 624 KRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAA 703 (892)
Q Consensus 624 ~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~ 703 (892)
+.|++|+|+|||+||+||||+|||||||| +|+++||++||+++.||||++|+++++|||++|+||+|+++|+++.|+..
T Consensus 628 ~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~ 706 (917)
T TIGR01116 628 EQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGE 706 (917)
T ss_pred hcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Q 043305 704 LVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVL 783 (892)
Q Consensus 704 ~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l 783 (892)
+++.+++.++..+.||+++|+||+|+++|++|+++|++|||++++|++||+.++++++++.||+.+++++++|.++.+..
T Consensus 707 ~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~ 786 (917)
T TIGR01116 707 VVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGG 786 (917)
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988889999999999999999999999999999999999999999999999999999999999998775443
Q ss_pred HHHhhhhcccCC---------C--Cc-----ccccccchhHHHHHHHHHHHhhhhcccCCCCccccc-CCcchHHHHHHH
Q 043305 784 NFQGKRILNLES---------D--SN-----AHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFG-GITKNRLFMGIV 846 (892)
Q Consensus 784 ~~~g~~~~~~~~---------~--~~-----~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~-~~~~N~~f~~~i 846 (892)
+++.....+..+ . +. ......++|++|++||++|+||.||||+. +.++|+ ++++|++|++++
T Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~ 865 (917)
T TIGR01116 787 FVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE-DQSLLRMPPWVNKWLIGAI 865 (917)
T ss_pred HHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC-cccccccCCccCHHHHHHH
Confidence 332211111100 0 00 01235678999999999999999999996 457776 789999999999
Q ss_pred HHHHHHHHHH--HHHhhhccccccCChHHHHHHHHHHHHHHHHHhhc
Q 043305 847 AVTLVLQILI--IQFLGKFASTTRLNWKHWIISVVIGFIRLFEHPVL 891 (892)
Q Consensus 847 ~~~~~~qi~~--v~~~~~~f~~~~L~~~~w~~~i~~~~~~l~~~eiv 891 (892)
++++++|+++ +|+++.+|+++||++.+|++|++++++.+++.|+.
T Consensus 866 ~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~ 912 (917)
T TIGR01116 866 CLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVL 912 (917)
T ss_pred HHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887 78999999999999999999999999999998863
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-105 Score=910.94 Aligned_cols=732 Identities=27% Similarity=0.388 Sum_probs=592.1
Q ss_pred ccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--c---
Q 043305 151 LQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIK--T--- 225 (892)
Q Consensus 151 ~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~--~--- 225 (892)
+++++|+++++||..+||+.. ++.+|++.-|+|.+++||..+-|..+.+++....-++|.++|+++++.=.+ +
T Consensus 42 ~~~~eL~~r~~t~~~~Glt~~--~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~ 119 (1019)
T KOG0203|consen 42 LSVDELCERYGTSVSQGLTSQ--EAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTED 119 (1019)
T ss_pred CCHHHHHHHhcCChhhcccHH--HHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCC
Confidence 349999999999999999998 899999999999999999999999999999999999999999999752110 0
Q ss_pred ---------------------------eec--------------------Cc----------------------------
Q 043305 226 ---------------------------EYL--------------------AG---------------------------- 230 (892)
Q Consensus 226 ---------------------------eg~--------------------~g---------------------------- 230 (892)
|.+ ||
T Consensus 120 ~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADi 199 (1019)
T KOG0203|consen 120 DPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADI 199 (1019)
T ss_pred CCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCccccee
Confidence 100 11
Q ss_pred -EEEEEE-------eeccc-------------------------------------------------------cccccc
Q 043305 231 -VRFVRF-------FTGHT-------------------------------------------------------KNAYGT 247 (892)
Q Consensus 231 -vl~~~~-------~~~~~-------------------------------------------------------~~~~~~ 247 (892)
++..+. ++|.. .+..++
T Consensus 200 Riis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~ 279 (1019)
T KOG0203|consen 200 RIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTP 279 (1019)
T ss_pred EEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCc
Confidence 000000 00000 000001
Q ss_pred eE-----Eeecccc-----c-c------chhhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeecccc
Q 043305 248 IQ-----FKAGKTK-----V-S------DAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSA 310 (892)
Q Consensus 248 ~~-----~~~~~~~-----~-~------~~~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a 310 (892)
.+ |..-.+. . . ....++++++...+.++|+.+|||||..||.+|+.-.+||+++|.+||+|.|
T Consensus 280 ~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLea 359 (1019)
T KOG0203|consen 280 IAKEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEA 359 (1019)
T ss_pred chhhhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeh
Confidence 00 0000000 0 0 0013456666677889999999999999999999999999999999999999
Q ss_pred ccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCC-------CCCCCCHHHHHHHHHHHHhcCCCccccCCCCC--
Q 043305 311 CETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTD-------SNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGG-- 381 (892)
Q Consensus 311 ~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~-------~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~-- 381 (892)
+||+|+.++||||||||||+|+|+|.++|.++....... .....++....++..+..||... . .+.+.+
T Consensus 360 vetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~-~-~~gq~dvP 437 (1019)
T KOG0203|consen 360 VETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAV-F-KPGQDDVP 437 (1019)
T ss_pred eeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcce-e-cccccCCc
Confidence 999999999999999999999999999999876432211 11122445556666666666542 2 222222
Q ss_pred --CccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCC---CcEEEEEcCceeeeecccccc
Q 043305 382 --EAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPN---SEVHIHWKGAAEIVLDSCTGY 456 (892)
Q Consensus 382 --~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~---~~~~~~~KGA~e~IL~~C~~~ 456 (892)
+....||+.|.||++|+...-.+.+.+|..++.+..+||||.+|+.-.+++..+ .++.+.+|||||.++++|+.+
T Consensus 438 v~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi 517 (1019)
T KOG0203|consen 438 VLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTI 517 (1019)
T ss_pred eeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccce
Confidence 234679999999999998665667889999999999999999999999987654 467788999999999999987
Q ss_pred ccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh--hhhccCCCCCcEEEEEEEecCCCchhHH
Q 043305 457 IDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE--LSRWALPEDDLVLLAIVGIKDPCRPSVK 534 (892)
Q Consensus 457 ~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~--~~~~~~~e~~l~~lGlvgi~DplR~~v~ 534 (892)
. .+|+..|++++.++.+.....++...|-||++|+++.++.+++|..-. .+..+.+..++.|+|++.+.||||..+|
T Consensus 518 ~-i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP 596 (1019)
T KOG0203|consen 518 L-INGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVP 596 (1019)
T ss_pred e-ecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCc
Confidence 5 478999999999999999999999999999999999998776664322 1233456789999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC-------------------CCCCceecchhhhhcCHHHHHH
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD-------------------ATEPNIIEGKSFRALSETQREE 595 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~-------------------~~~~~vi~G~~~~~l~~~e~~~ 595 (892)
+||.+||.|||+|+|+|||++.||+|||++.||+....+ .....|+.|.++..++.+++++
T Consensus 597 ~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~ 676 (1019)
T KOG0203|consen 597 DAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDE 676 (1019)
T ss_pred hhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHH
Confidence 999999999999999999999999999999998875442 1256889999999999999999
Q ss_pred HhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHH
Q 043305 596 IAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASV 675 (892)
Q Consensus 596 i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sI 675 (892)
++.++ .--||||.||+||+.||+..|++|.+|++||||+||+||||+||||||||++|+|++|+|||+||+||||+||
T Consensus 677 il~nh--~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASI 754 (1019)
T KOG0203|consen 677 LLQNH--QEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASI 754 (1019)
T ss_pred HHHhC--CceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhh
Confidence 99854 4479999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCC
Q 043305 676 VKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVG 755 (892)
Q Consensus 676 v~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~ 755 (892)
|..+++||.+|+|+||.|.|.||.|+..+...+++.+++.|.|+.++++|.+.|.+|..||++||+|+|+.++|+|+|+.
T Consensus 755 VtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~ 834 (1019)
T KOG0203|consen 755 VTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRN 834 (1019)
T ss_pred eeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -CCCCCccHHHHHHHHHH-HHHHHHHHHHHHHHhhh--------hcccCC-------CC-------------cccccccc
Q 043305 756 -RREPLITNIMWRNLLIQ-ASYQVSVLLVLNFQGKR--------ILNLES-------DS-------------NAHSNKVK 805 (892)
Q Consensus 756 -r~~~li~~~m~~~i~~~-ai~q~~v~~~l~~~g~~--------~~~~~~-------~~-------------~~~~~~~~ 805 (892)
+++.|++.+....-.+| +++|++..|+.+|.-.. +.++.. .+ ......+.
T Consensus 835 p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc 914 (1019)
T KOG0203|consen 835 PKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTC 914 (1019)
T ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhh
Confidence 77889998766444433 56776666555443111 111100 00 01112345
Q ss_pred hhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHH--HHHHHHHhhhccccccCChHHHHHHHHHHHH
Q 043305 806 NTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVL--QILIIQFLGKFASTTRLNWKHWIISVVIGFI 883 (892)
Q Consensus 806 ~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~--qi~~v~~~~~~f~~~~L~~~~w~~~i~~~~~ 883 (892)
+|..|.++|.+|+++.+-|... +.++|+.-++||+++..+++.+++ ++.+++.....+++.||.|.+|+..+..+++
T Consensus 915 ~taFfvsIvV~Q~adLii~KTR-RnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~il 993 (1019)
T KOG0203|consen 915 YTAFFISIVVVQWADLIICKTR-RNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGIL 993 (1019)
T ss_pred hhheeeeehHHhHhhHHhhhcc-hhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccceee
Confidence 7889999999999999988654 567888668999988776665544 4445677888999999999999999999998
Q ss_pred HHHHHhh
Q 043305 884 RLFEHPV 890 (892)
Q Consensus 884 ~l~~~ei 890 (892)
.|+.+|+
T Consensus 994 IfvydE~ 1000 (1019)
T KOG0203|consen 994 IFVYDEV 1000 (1019)
T ss_pred eeeHHHH
Confidence 8888774
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-97 Score=932.20 Aligned_cols=575 Identities=21% Similarity=0.266 Sum_probs=457.0
Q ss_pred HHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcc
Q 043305 265 IKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRK 344 (892)
Q Consensus 265 ~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~ 344 (892)
.+.+..++++++++||||||+++|+++++|++||+|+|++||+++++|++|++++||||||||||+|+|+|.+++..+..
T Consensus 396 ~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~ 475 (1054)
T TIGR01657 396 GKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGN 475 (1054)
T ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCc
Confidence 35567789999999999999999999999999999999999999999999999999999999999999999999875431
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHc-CC-C---hhh----------hh
Q 043305 345 MNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKL-GM-N---FEA----------VR 409 (892)
Q Consensus 345 ~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~-g~-~---~~~----------~r 409 (892)
.................+..+++.|++... . ++ +..|||+|.|+++++... .. + ... -.
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~--~--~~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 549 (1054)
T TIGR01657 476 QEFLKIVTEDSSLKPSITHKALATCHSLTK--L--EG--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPP 549 (1054)
T ss_pred cccccccccccccCchHHHHHHHhCCeeEE--E--CC--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCC
Confidence 110000000000111223345556665432 1 12 578999999999986311 11 0 000 02
Q ss_pred cccceeeeeccccCCceeEEEEecCC-CcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeE
Q 043305 410 SECSVLHVFPFNSLKKRGGVAVQLPN-SEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRC 488 (892)
Q Consensus 410 ~~~~i~~~~pF~S~rK~msvvv~~~~-~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~ 488 (892)
.++++++.+||+|++|||||+++.++ +++++++|||||.|+++|+.. ..++.+.+.+++|+++|+||
T Consensus 550 ~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RV 617 (1054)
T TIGR01657 550 QELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRV 617 (1054)
T ss_pred ceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEE
Confidence 46788999999999999999998654 567899999999999999741 12456888899999999999
Q ss_pred EEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCC
Q 043305 489 VAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL 568 (892)
Q Consensus 489 l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~ 568 (892)
||+|||+++..+..... ...++..|+||+|+|+++++||+||+++++|+.|++|||+|+|+||||+.||.+||++|||+
T Consensus 618 LalA~k~l~~~~~~~~~-~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 618 LALAYKELPKLTLQKAQ-DLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred EEEEEeecCccchhhhh-hccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 99999998742211110 11234578999999999999999999999999999999999999999999999999999998
Q ss_pred CCcCC------------------------------------------------CCCCceecchhhhh---cCHHHHHHHh
Q 043305 569 TSEAD------------------------------------------------ATEPNIIEGKSFRA---LSETQREEIA 597 (892)
Q Consensus 569 ~~~~~------------------------------------------------~~~~~vi~G~~~~~---l~~~e~~~i~ 597 (892)
+++.. .....+++|++|+. +.++++.+++
T Consensus 697 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~ 776 (1054)
T TIGR01657 697 NPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLL 776 (1054)
T ss_pred CCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHH
Confidence 65320 01136899999876 4667888888
Q ss_pred cccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHH
Q 043305 598 GEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVK 677 (892)
Q Consensus 598 ~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~ 677 (892)
. +..||||++|+||.++|+.||+.|++|||||||+||+||||+||||||||. +|+ ..+||+++.+|||++|++
T Consensus 777 ~----~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~--~da-s~AA~f~l~~~~~~~I~~ 849 (1054)
T TIGR01657 777 S----HTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSE--AEA-SVAAPFTSKLASISCVPN 849 (1054)
T ss_pred h----cCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeecc--ccc-eeecccccCCCcHHHHHH
Confidence 8 889999999999999999999999999999999999999999999999983 354 489999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCC
Q 043305 678 VVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRR 757 (892)
Q Consensus 678 ~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~ 757 (892)
+|+|||++|.|++++++|.+.+++...+..++ ++....||+++|+||+|+++|++++++|+.+||.+++|++||.
T Consensus 850 ~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~--- 924 (1054)
T TIGR01657 850 VIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP--- 924 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCC---
Confidence 99999999999999999999999887555443 3345699999999999999999999999999999999999994
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc---CC--CCcccccccchhHHHHHHHHHHHhhhhcccCCCCccc
Q 043305 758 EPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNL---ES--DSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNI 832 (892)
Q Consensus 758 ~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~---~~--~~~~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~ 832 (892)
++++++.++..+++|+++++++.++.++.....-.. .. .+........+|++| .++.+|.++.+++++. ..++
T Consensus 925 ~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~-g~pf 1002 (1054)
T TIGR01657 925 SNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSK-GPPF 1002 (1054)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcC-Ccch
Confidence 689999999999999999998887776654321110 00 000122344579999 5555566666777775 4466
Q ss_pred ccCCcchHHHHHHHHHHHHHHHH----HHHHhhhccccccCChH
Q 043305 833 FGGITKNRLFMGIVAVTLVLQIL----IIQFLGKFASTTRLNWK 872 (892)
Q Consensus 833 f~~~~~N~~f~~~i~~~~~~qi~----~v~~~~~~f~~~~L~~~ 872 (892)
.+++++|++|++.+++++++++. ++++++.+|+++|++..
T Consensus 1003 ~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1046 (1054)
T TIGR01657 1003 REPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQE 1046 (1054)
T ss_pred hhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCHH
Confidence 67999999998887777666653 25789999999999853
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-95 Score=888.22 Aligned_cols=515 Identities=22% Similarity=0.346 Sum_probs=421.6
Q ss_pred HHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCc
Q 043305 264 AIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR 343 (892)
Q Consensus 264 ~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~ 343 (892)
+.+.+.++++++|++||||||+++|++++++++||+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 233 ~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~ 312 (755)
T TIGR01647 233 FREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFN 312 (755)
T ss_pred HHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCC
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999986432
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccC
Q 043305 344 KMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSL 423 (892)
Q Consensus 344 ~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~ 423 (892)
. .+++ +++..+..+|. +..+||+|.|+++++.+.+ ..+..+++++.+||+|.
T Consensus 313 ~---------~~~~--~~l~~a~~~~~-------------~~~~~pi~~Ai~~~~~~~~----~~~~~~~~~~~~pf~~~ 364 (755)
T TIGR01647 313 G---------FDKD--DVLLYAALASR-------------EEDQDAIDTAVLGSAKDLK----EARDGYKVLEFVPFDPV 364 (755)
T ss_pred C---------CCHH--HHHHHHHHhCC-------------CCCCChHHHHHHHHHHHhH----HHHhcCceEEEeccCCC
Confidence 1 1111 23333333331 1147999999999987643 33456788899999999
Q ss_pred CceeEEEEecCC-CcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCC
Q 043305 424 KKRGGVAVQLPN-SEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIP 502 (892)
Q Consensus 424 rK~msvvv~~~~-~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~ 502 (892)
+|+|+++++.++ ++.+.++|||||.++++|++. ++.++++++.+++++++|+|++++|||+
T Consensus 365 ~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~------- 426 (755)
T TIGR01647 365 DKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKVDELASRGYRALGVARTD------- 426 (755)
T ss_pred CCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHHHHHHhCCCEEEEEEEEc-------
Confidence 999999987653 667788999999999999742 3446678889999999999999999973
Q ss_pred chhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecc
Q 043305 503 DEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEG 582 (892)
Q Consensus 503 ~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G 582 (892)
.|++|+|+|+++++||+|||++++|++||++||+|+|+||||+.||++||++|||..... ....+.+|
T Consensus 427 ----------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~--~~~~l~~~ 494 (755)
T TIGR01647 427 ----------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIY--TADVLLKG 494 (755)
T ss_pred ----------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCc--CHHHhcCC
Confidence 146899999999999999999999999999999999999999999999999999974311 12245567
Q ss_pred hhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhc
Q 043305 583 KSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKES 662 (892)
Q Consensus 583 ~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkea 662 (892)
.++..+++++++++++ +..||||++|+||.++|+.||++|++|||||||+||+||||+|||||||| +|||+||++
T Consensus 495 ~~~~~~~~~~~~~~~~----~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkea 569 (755)
T TIGR01647 495 DNRDDLPSGELGEMVE----DADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSA 569 (755)
T ss_pred cchhhCCHHHHHHHHH----hCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHh
Confidence 7777899999999999 88999999999999999999999999999999999999999999999999 899999999
Q ss_pred ccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccC
Q 043305 663 SDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATE 742 (892)
Q Consensus 663 aDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e 742 (892)
||+||+||||++|++++++||++|+||+|+++|+++.|+..+++.+++.++.+ .||+|+|+||+|+++|. +++++++|
T Consensus 570 ADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~~l~~~ 647 (755)
T TIGR01647 570 ADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIMTIAYD 647 (755)
T ss_pred CCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHhhccCC
Confidence 99999999999999999999999999999999999999998887777766444 56999999999999996 69999999
Q ss_pred CCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhh---hcccCCCCcccccccchhHHHHHHHHHHHh
Q 043305 743 PPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKR---ILNLESDSNAHSNKVKNTLIFNSFVLCQIF 819 (892)
Q Consensus 743 ~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~---~~~~~~~~~~~~~~~~~T~~F~~fV~~qvf 819 (892)
++++. |+| +...++ .+++.++..+.+..+..+.++++... .+...+. .......+|+.|.++++.|.|
T Consensus 648 ~~~~~---~~p---~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~t~~f~~~~~~~~~ 718 (755)
T TIGR01647 648 NVKPS---KLP---QRWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL--QLLHGNLQSLIYLQVSISGQA 718 (755)
T ss_pred CCCCC---CCC---CccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc--cccHhhhHHHHHHHHHHHHHH
Confidence 98753 333 333444 67777888888887765555543321 1101110 012245789999999999999
Q ss_pred hhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHH
Q 043305 820 NEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQIL 855 (892)
Q Consensus 820 n~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~ 855 (892)
+.+++|+.. ..|+.. .|++++...++.+++.++
T Consensus 719 ~~~~~r~~~--~~~~~~-p~~~l~~~~~~~~~~~~~ 751 (755)
T TIGR01647 719 TIFVTRTHG--FFWSER-PGKLLFIAFVIAQIIATF 751 (755)
T ss_pred HHheeccCC--CCcccC-CcHHHHHHHHHHHHHHHH
Confidence 999999753 334433 455555554444444433
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-85 Score=824.66 Aligned_cols=604 Identities=23% Similarity=0.293 Sum_probs=456.9
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cceecCcEEEEEEeeccccccccceEEeecc-ccccc
Q 043305 182 FGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGI-KTEYLAGVRFVRFFTGHTKNAYGTIQFKAGK-TKVSD 259 (892)
Q Consensus 182 ~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~-~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 259 (892)
.|.|.-..+.++|.++.-.+.+--.+++++++.++++.+++. +.. .... . .|.... .....
T Consensus 229 ~~~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~-------------~~~~---~-~~yl~~~~~~~~ 291 (1057)
T TIGR01652 229 LMRNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWND-------------AHGK---D-LWYIRLDVSERN 291 (1057)
T ss_pred hhhcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheec-------------ccCC---C-ccceecCccccc
Confidence 366776667777888777766655444444444444444432 210 0000 0 010000 00001
Q ss_pred hhhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHH------HHHHhCC----ceeeccccccccCceeEEEeCCCCCcc
Q 043305 260 AVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSM------RKMMADK----ALVRRLSACETMGSATTICSDKTGTLT 329 (892)
Q Consensus 260 ~~~~~~~~~~~avtilvvavPegLplavtl~la~~~------~~m~k~~----~lVr~l~a~EtlG~vt~IcsDKTGTLT 329 (892)
....++..|..++.+++.+||++||..+++++++.+ ++|++++ ++||+++++|+||++++||||||||||
T Consensus 292 ~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT 371 (1057)
T TIGR01652 292 AAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLT 371 (1057)
T ss_pred chhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCcee
Confidence 112355567788999999999999999999999999 8898754 999999999999999999999999999
Q ss_pred cCceEEEEEEeCCcccCCCCC---------CC-------------------------------CCCHHHHHHHHHHHHhc
Q 043305 330 LNQMTVVEAYVGGRKMNPTDS---------NS-------------------------------QLSPMVTSLLVEGIAQN 369 (892)
Q Consensus 330 ~n~M~V~~~~~~~~~~~~~~~---------~~-------------------------------~~~~~~~~ll~~~i~~n 369 (892)
+|+|++++++++|..|..... .. ...+...+++ .+++.|
T Consensus 372 ~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~lC 450 (1057)
T TIGR01652 372 QNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFF-LALALC 450 (1057)
T ss_pred eeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHH-HHHHhc
Confidence 999999999998876542100 00 0011123333 344555
Q ss_pred CCCccccCCCC-C-CccccCChHHHHHHHHHHHcCCChhh--------------hhcccceeeeeccccCCceeEEEEec
Q 043305 370 TTGSVYLPPNG-G-EAEVSGSPTEKAILQWGMKLGMNFEA--------------VRSECSVLHVFPFNSLKKRGGVAVQL 433 (892)
Q Consensus 370 ~~~~~~~~~~~-~-~~~~~g~ptE~ALl~~a~~~g~~~~~--------------~r~~~~i~~~~pF~S~rK~msvvv~~ 433 (892)
|+......+++ + ..+..|||+|.||+++|.+.|+.+.. ...++++++++||+|+||||||+++.
T Consensus 451 ~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~ 530 (1057)
T TIGR01652 451 HTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRN 530 (1057)
T ss_pred CcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEe
Confidence 55433221111 1 12346999999999999999976542 22368899999999999999999998
Q ss_pred CCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchh--------
Q 043305 434 PNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEE-------- 505 (892)
Q Consensus 434 ~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~-------- 505 (892)
+++++.+++|||||.|+++|++. +++.++.+.+.+++|+.+|+||+++|||.++++++.+..
T Consensus 531 ~~~~~~l~~KGA~e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~ 600 (1057)
T TIGR01652 531 PDGRIKLLCKGADTVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEAST 600 (1057)
T ss_pred CCCeEEEEEeCcHHHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHh
Confidence 88889999999999999999741 234567889999999999999999999999754322110
Q ss_pred -------h-hhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC----
Q 043305 506 -------E-LSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD---- 573 (892)
Q Consensus 506 -------~-~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~---- 573 (892)
. ....+.+|+||+|+|++|++||+|+||+++|++|++|||+|||+|||+++||.+||++|||++++..
T Consensus 601 ~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i 680 (1057)
T TIGR01652 601 ALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVI 680 (1057)
T ss_pred hhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEE
Confidence 0 0112347899999999999999999999999999999999999999999999999999999976531
Q ss_pred --------------------------------CCCCceecchhhhhcCHHH----HHHHhcccccceEEEeccCHhhHHH
Q 043305 574 --------------------------------ATEPNIIEGKSFRALSETQ----REEIAGEDFGMICVMGRSSPSDKLL 617 (892)
Q Consensus 574 --------------------------------~~~~~vi~G~~~~~l~~~e----~~~i~~~~~~~~~V~aR~sP~dK~~ 617 (892)
....++++|+++..+.+++ +.+++. .++..||||++|+||.+
T Consensus 681 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~--~~~~vV~aR~sP~qK~~ 758 (1057)
T TIGR01652 681 TSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLAL--KCKAVICCRVSPSQKAD 758 (1057)
T ss_pred ecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHh--hCCEEEEeCCCHHHHHH
Confidence 0123589999998665543 334444 23557999999999999
Q ss_pred HHHHHHHc-CCeEEEeCCCCCChHhhhcCCeeEeecCCCcH--hhhhcccEEEcCCCchHHHHHH-HHHHHHHHHHHHHH
Q 043305 618 LVQALRKR-GDVVAVTGDGTNDAPALHEADIGLAMGIQGTE--VAKESSDIIILDDNFASVVKVV-RWGRSVYANIQKFI 693 (892)
Q Consensus 618 lV~~Lq~~-g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~--vAkeaaDiil~ddnf~sIv~~i-~~GR~v~~nI~k~i 693 (892)
+|+.+|+. |++|+|||||+||+||||+|||||+ +.|+| .|+++||++|.+ |++|.+++ .+||++|+|+++++
T Consensus 759 IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIg--i~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i 834 (1057)
T TIGR01652 759 VVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVG--ISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMI 834 (1057)
T ss_pred HHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeE--ecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHH
Confidence 99999998 9999999999999999999999995 46787 599999999986 99999998 88999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC---CCchhHHHHHHHHhhhhhhhhhhccc--CCCCccccccCCC----CCCCCCccHH
Q 043305 694 QFQLTVNVAALVINFVAAVSSG---DVPLNAVQLLWVNLIMDTLGALALAT--EPPTDHLMQRSPV----GRREPLITNI 764 (892)
Q Consensus 694 ~f~lt~Nv~~~~~~~~~~~~~~---~~pl~~vqlLwvnli~d~l~alaLa~--e~p~~~lm~r~P~----~r~~~li~~~ 764 (892)
+|+++.|++.+++.+++.++.+ .+|+++++++|+|+++|++|++++|. +++++++|.++|+ +++.++++..
T Consensus 835 ~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~ 914 (1057)
T TIGR01652 835 LYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTK 914 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHH
Confidence 9999999999999999888754 46899999999999999999999986 6778899999997 6778899988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh--cccCCCCcccccccchhHHHHHHHHHHHhhh
Q 043305 765 MWRNLLIQASYQVSVLLVLNFQGKRI--LNLESDSNAHSNKVKNTLIFNSFVLCQIFNE 821 (892)
Q Consensus 765 m~~~i~~~ai~q~~v~~~l~~~g~~~--~~~~~~~~~~~~~~~~T~~F~~fV~~qvfn~ 821 (892)
.+..+++.++||+++++++.+..... ...+|. ........+++|.++++...+..
T Consensus 915 ~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~ 971 (1057)
T TIGR01652 915 TFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGS--LDDFSSVGVIVFTALVVIVNLKI 971 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCc--ccchhhHHHHHHHHHHHHHHHHH
Confidence 88888999999998887665433211 011121 11223455677777766655443
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-76 Score=740.13 Aligned_cols=503 Identities=22% Similarity=0.304 Sum_probs=404.4
Q ss_pred HHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCC----------ceeeccccccccCceeEEEeCCCCCcccCceEEEE
Q 043305 268 LTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADK----------ALVRRLSACETMGSATTICSDKTGTLTLNQMTVVE 337 (892)
Q Consensus 268 ~~~avtilvvavPegLplavtl~la~~~~~m~k~~----------~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~ 337 (892)
|...+.++-..||++|+..++++..+....|.+|+ +.||+.+.+|+||++++||||||||||+|+|++++
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 34445566699999999999999977677887776 77999999999999999999999999999999999
Q ss_pred EEeCCcccCCCCC--------------------CCC--C----------------CHHHHHHHHHHHHhcCCCccccCCC
Q 043305 338 AYVGGRKMNPTDS--------------------NSQ--L----------------SPMVTSLLVEGIAQNTTGSVYLPPN 379 (892)
Q Consensus 338 ~~~~~~~~~~~~~--------------------~~~--~----------------~~~~~~ll~~~i~~n~~~~~~~~~~ 379 (892)
++++|..|..... ... . .+.+.+ +..+++.||+......++
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-fl~~lalChtv~~~~~~~ 552 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHD-FFLALAACNTIVPIVVDD 552 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHH-HHHHHHhcCCceeeccCC
Confidence 9998766632100 000 0 011223 344556666653321111
Q ss_pred C-C----Cc-cccCChHHHHHHHHHHHcCC------------ChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEE
Q 043305 380 G-G----EA-EVSGSPTEKAILQWGMKLGM------------NFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIH 441 (892)
Q Consensus 380 ~-~----~~-~~~g~ptE~ALl~~a~~~g~------------~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~ 441 (892)
+ + .. +..+||+|.||+++|.++|+ +....+.++++++++||+|+||||||+++.+++.+.+|
T Consensus 553 ~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~ 632 (1178)
T PLN03190 553 TSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVF 632 (1178)
T ss_pred CCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEE
Confidence 1 1 12 33459999999999999997 44455678999999999999999999999888889999
Q ss_pred EcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh---------------
Q 043305 442 WKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE--------------- 506 (892)
Q Consensus 442 ~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~--------------- 506 (892)
+|||||.|+++|++.. +++.++.+.+.+++||++|+||||+|||+++.+++.+...
T Consensus 633 ~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~ 703 (1178)
T PLN03190 633 VKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAAL 703 (1178)
T ss_pred EecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHH
Confidence 9999999999997542 2335677889999999999999999999997543321100
Q ss_pred -hhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC------------
Q 043305 507 -LSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD------------ 573 (892)
Q Consensus 507 -~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~------------ 573 (892)
....+.+|+||+++|+++++||+|+|++++|++|++|||+|||+|||+.+||.+||++|||++++..
T Consensus 704 l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~ 783 (1178)
T PLN03190 704 LRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESC 783 (1178)
T ss_pred HHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhH
Confidence 0112457899999999999999999999999999999999999999999999999999999876431
Q ss_pred --------------------------------CCCCceecchhhhhcCH----HHHHHHhcccccceEEEeccCHhhHHH
Q 043305 574 --------------------------------ATEPNIIEGKSFRALSE----TQREEIAGEDFGMICVMGRSSPSDKLL 617 (892)
Q Consensus 574 --------------------------------~~~~~vi~G~~~~~l~~----~e~~~i~~~~~~~~~V~aR~sP~dK~~ 617 (892)
....++++|.++..+.+ +++.++.. .|++.||||+||.||.+
T Consensus 784 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~--~~~~VI~cR~sP~QKa~ 861 (1178)
T PLN03190 784 RKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLAS--KCSVVLCCRVAPLQKAG 861 (1178)
T ss_pred HHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHH--hCCEEEEecCCHHHHHH
Confidence 01237899999988765 34445554 23566899999999999
Q ss_pred HHHHHHHc-CCeEEEeCCCCCChHhhhcCCeeEeecCCCcH--hhhhcccEEEcCCCchHHHHHH-HHHHHHHHHHHHHH
Q 043305 618 LVQALRKR-GDVVAVTGDGTNDAPALHEADIGLAMGIQGTE--VAKESSDIIILDDNFASVVKVV-RWGRSVYANIQKFI 693 (892)
Q Consensus 618 lV~~Lq~~-g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~--vAkeaaDiil~ddnf~sIv~~i-~~GR~v~~nI~k~i 693 (892)
+|+.+|++ +++|+|+|||+||+||||+||||| |++|+| .|+.+||+.|.. |+.+.+++ .|||+.|.|+.+++
T Consensus 862 IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i 937 (1178)
T PLN03190 862 IVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMI 937 (1178)
T ss_pred HHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHH
Confidence 99999997 589999999999999999999999 778998 799999999987 99999998 69999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC---CchhHHHHHHHHhhhhhhhhhhccc---CCCCccccccCC---CCCCCCCccHH
Q 043305 694 QFQLTVNVAALVINFVAAVSSGD---VPLNAVQLLWVNLIMDTLGALALAT---EPPTDHLMQRSP---VGRREPLITNI 764 (892)
Q Consensus 694 ~f~lt~Nv~~~~~~~~~~~~~~~---~pl~~vqlLwvnli~d~l~alaLa~---e~p~~~lm~r~P---~~r~~~li~~~ 764 (892)
+|.+++|++..+++|++.++.+. ..+..+-+..+|++++.+|.+++|. +-|.+.+++.|- .++....++..
T Consensus 938 ~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~ 1017 (1178)
T PLN03190 938 LYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSK 1017 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHH
Confidence 99999999999999999888665 4567888999999999999999964 334444444432 24567788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 043305 765 MWRNLLIQASYQVSVLLVLNFQ 786 (892)
Q Consensus 765 m~~~i~~~ai~q~~v~~~l~~~ 786 (892)
.+..|++.|+||.++++++.+.
T Consensus 1018 ~F~~w~~~~i~qs~iiff~~~~ 1039 (1178)
T PLN03190 1018 LFWLTMIDTLWQSAVVFFVPLF 1039 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 7778899999999988876543
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-68 Score=620.60 Aligned_cols=572 Identities=21% Similarity=0.304 Sum_probs=431.8
Q ss_pred HHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcc
Q 043305 265 IKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRK 344 (892)
Q Consensus 265 ~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~ 344 (892)
-.+++.++.++.+.||++||+++|+...++.+||.|+||+|-++..+...|+.+++|||||||||++.+.+-.+..-...
T Consensus 416 ~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~ 495 (1140)
T KOG0208|consen 416 KTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERN 495 (1140)
T ss_pred HHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccc
Confidence 35667788889999999999999999999999999999999999999999999999999999999999999887753221
Q ss_pred cCCCC-------CC----CCCC--H--HHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHH---c----C
Q 043305 345 MNPTD-------SN----SQLS--P--MVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMK---L----G 402 (892)
Q Consensus 345 ~~~~~-------~~----~~~~--~--~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~---~----g 402 (892)
.+..+ .. ..++ . ....-+..+++.||+... ......|||.|.-+.+...- - +
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~------v~g~l~GDPLdlkmfe~t~w~~ee~~~~~ 569 (1140)
T KOG0208|consen 496 VDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTL------VDGTLVGDPLDLKMFESTGWVYEEADIED 569 (1140)
T ss_pred ccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEE------eCCeeccCceeeeeeeccceEEEeccccc
Confidence 10000 00 0000 0 012235566777776433 12246789988877754320 0 0
Q ss_pred C-------------Ch-----hhhhc----ccceeeeeccccCCceeEEEEecC-CCcEEEEEcCceeeeeccccccccC
Q 043305 403 M-------------NF-----EAVRS----ECSVLHVFPFNSLKKRGGVAVQLP-NSEVHIHWKGAAEIVLDSCTGYIDT 459 (892)
Q Consensus 403 ~-------------~~-----~~~r~----~~~i~~~~pF~S~rK~msvvv~~~-~~~~~~~~KGA~e~IL~~C~~~~~~ 459 (892)
- +. +.-.+ ++.+++.+||+|.-+||||+++.+ +.+..+|+|||||.|.+.|+.-
T Consensus 570 ~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--- 646 (1140)
T KOG0208|consen 570 EATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--- 646 (1140)
T ss_pred hhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc---
Confidence 0 00 00000 467899999999999999999976 4678999999999999999741
Q ss_pred CCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHH
Q 043305 460 DDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRL 539 (892)
Q Consensus 460 ~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~ 539 (892)
.+ .+.+++.++.|+.+|+|+||+|+|.++...+.+. ....++..|+||+|+|++.|++++|++++.+|++
T Consensus 647 ---tv------P~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~-~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~e 716 (1140)
T KOG0208|consen 647 ---TV------PADYQEVLKEYTHQGFRVIALASKELETSTLQKA-QKLSRDTVESNLEFLGLIVMENKLKEETKRVIDE 716 (1140)
T ss_pred ---cC------CccHHHHHHHHHhCCeEEEEEecCccCcchHHHH-hhccHhhhhccceeeEEEEeecccccccHHHHHH
Confidence 22 3458889999999999999999999986522211 1234667899999999999999999999999999
Q ss_pred HHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC----------------------------------------------
Q 043305 540 CRIAGVKVRMVTGDNIQTARAIALECGILTSEAD---------------------------------------------- 573 (892)
Q Consensus 540 l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~---------------------------------------------- 573 (892)
|++|.||++|+||||..||..+||+|||+.+...
T Consensus 717 L~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d 796 (1140)
T KOG0208|consen 717 LNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLD 796 (1140)
T ss_pred HHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChh
Confidence 9999999999999999999999999999976431
Q ss_pred ----CCCCceecchhhhhc---CHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCC
Q 043305 574 ----ATEPNIIEGKSFRAL---SETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEAD 646 (892)
Q Consensus 574 ----~~~~~vi~G~~~~~l---~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~Ad 646 (892)
.+..++++|+.|+-+ ..+.+++++. +..||||++|.||..+|+.||+.|..|+|+|||+||+.|||+||
T Consensus 797 ~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~----~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAd 872 (1140)
T KOG0208|consen 797 VLSEKDYHLAMSGKTFQVILEHFPELVPKILL----KGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAAD 872 (1140)
T ss_pred hhccceeEEEecCchhHHHHhhcHHHHHHHHh----cCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcc
Confidence 012467889988765 4566777777 88999999999999999999999999999999999999999999
Q ss_pred eeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCCCchhHHHH
Q 043305 647 IGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAA--VSSGDVPLNAVQL 724 (892)
Q Consensus 647 VGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~--~~~~~~pl~~vql 724 (892)
+|||++.+ .|.-||.+.-.-.+.+++.++|++||+....--..++|...+.+. +|++. +++...-++..|.
T Consensus 873 vGISLSea---EASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~i----qFisv~~LY~~~~nl~D~Qf 945 (1140)
T KOG0208|consen 873 VGISLSEA---EASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAI----QFISVVFLYLINSNLGDLQF 945 (1140)
T ss_pred cCcchhhh---hHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHH----HHHhhheeeeecccccchhh
Confidence 99999733 355568888887789999999999999999888888888777655 44443 3456788999999
Q ss_pred HHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhh--hcccCCCC-cccc
Q 043305 725 LWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKR--ILNLESDS-NAHS 801 (892)
Q Consensus 725 Lwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~--~~~~~~~~-~~~~ 801 (892)
|+++++..+..|++++..+|.+.|-..|| ...|+++......++|.++..++.+++++.+.. ++..+... ..+-
T Consensus 946 l~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt 1022 (1140)
T KOG0208|consen 946 LFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNT 1022 (1140)
T ss_pred hhhHHHHHHHHHHHHccCcHHHHhcCCCC---CccccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCccc
Confidence 99999999999999999999999988877 456888888888888877776666665554322 11111100 1223
Q ss_pred cccchhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHH--HH--H-hhhccccccCCh
Q 043305 802 NKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILI--IQ--F-LGKFASTTRLNW 871 (892)
Q Consensus 802 ~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~--v~--~-~~~~f~~~~L~~ 871 (892)
....+|.+|..-.|..+++.+-.-+ ..++.+.+|+|+.|...+......-+.+ +. + ..+.+..++.+-
T Consensus 1023 ~s~~~T~lF~vS~fqYi~~a~v~S~--g~pfr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~ 1095 (1140)
T KOG0208|consen 1023 QSSDNTSLFFVSSFQYIFIALVLSK--GSPFRRPLWKNVLFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPT 1095 (1140)
T ss_pred ccceeeEeeehhHHHHHHhheeecc--CCcccCchhcCceeeeehhhHHhhhhhhhhccccchhhhhhceeccCc
Confidence 3556788898888888888765433 3445567889988875544333322222 21 1 124566666655
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-67 Score=619.93 Aligned_cols=343 Identities=23% Similarity=0.344 Sum_probs=291.0
Q ss_pred HHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCccc
Q 043305 266 KILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKM 345 (892)
Q Consensus 266 ~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~ 345 (892)
..+.++++++|++|||+||+++|++++.|++||+|+|+++|+++++|++|++|+||+|||||||+|++.++++...+.
T Consensus 247 ~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~-- 324 (673)
T PRK14010 247 LSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS-- 324 (673)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC--
Confidence 456788889999999999999999999999999999999999999999999999999999999997776666542110
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCc
Q 043305 346 NPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKK 425 (892)
Q Consensus 346 ~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK 425 (892)
....+++..+..++.. ..||+++|+++++.+.+++....+ .+.+||++++|
T Consensus 325 ----------~~~~~ll~~a~~~~~~--------------s~~P~~~AIv~~a~~~~~~~~~~~-----~~~~pF~~~~k 375 (673)
T PRK14010 325 ----------SSFERLVKAAYESSIA--------------DDTPEGRSIVKLAYKQHIDLPQEV-----GEYIPFTAETR 375 (673)
T ss_pred ----------ccHHHHHHHHHHhcCC--------------CCChHHHHHHHHHHHcCCCchhhh-----cceeccccccc
Confidence 0112333333333321 249999999999998776543222 23579999999
Q ss_pred eeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchh
Q 043305 426 RGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEE 505 (892)
Q Consensus 426 ~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~ 505 (892)
+|++.++ ++ .+.|||+|.++++|+. +|...+. .+.+.+++++++|+|+++++.
T Consensus 376 ~~gv~~~---g~--~i~kGa~~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~~------------ 428 (673)
T PRK14010 376 MSGVKFT---TR--EVYKGAPNSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVLE------------ 428 (673)
T ss_pred eeEEEEC---CE--EEEECCHHHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEEE------------
Confidence 9999753 22 4569999999999974 2222221 256677889999999998762
Q ss_pred hhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhh
Q 043305 506 ELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSF 585 (892)
Q Consensus 506 ~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~ 585 (892)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.
T Consensus 429 ----------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~----------------- 481 (673)
T PRK14010 429 ----------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD----------------- 481 (673)
T ss_pred ----------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-----------------
Confidence 56899999999999999999999999999999999999999999999999995
Q ss_pred hhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccE
Q 043305 586 RALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDI 665 (892)
Q Consensus 586 ~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDi 665 (892)
.++||++|+||.++|+.+|++|++|||||||+||+|||++|||||||| +|||+|||+||+
T Consensus 482 -------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADi 541 (673)
T PRK14010 482 -------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANL 541 (673)
T ss_pred -------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCE
Confidence 389999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043305 666 IILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVS 713 (892)
Q Consensus 666 il~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~ 713 (892)
|++||||++|++++++||++|+|++|++.|.++.|+..++..+.+.+.
T Consensus 542 VLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~ 589 (673)
T PRK14010 542 IDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFM 589 (673)
T ss_pred EEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999887766654443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-64 Score=599.48 Aligned_cols=333 Identities=27% Similarity=0.398 Sum_probs=285.2
Q ss_pred HHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccC
Q 043305 267 ILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMN 346 (892)
Q Consensus 267 ~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~ 346 (892)
.+.++++++|++|||+|+.++++++..|++||+|+|+++|+++++|+||++|+||+|||||||+|+|++++++..+.
T Consensus 248 ~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~--- 324 (679)
T PRK01122 248 SITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG--- 324 (679)
T ss_pred HHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC---
Confidence 57788999999999999999999999999999999999999999999999999999999999999999999874221
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHH-cCCChhhhhcccceeeeeccccCCc
Q 043305 347 PTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMK-LGMNFEAVRSECSVLHVFPFNSLKK 425 (892)
Q Consensus 347 ~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~-~g~~~~~~r~~~~i~~~~pF~S~rK 425 (892)
.+++ +++ ..++.++.. ..||..+||++++.+ .+.+. .+..++..+.+||++.+|
T Consensus 325 -------~~~~--~ll-~~a~~~s~~-------------s~hP~~~AIv~~a~~~~~~~~--~~~~~~~~~~~pF~s~~~ 379 (679)
T PRK01122 325 -------VTEE--ELA-DAAQLSSLA-------------DETPEGRSIVVLAKQRFNLRE--RDLQSLHATFVPFSAQTR 379 (679)
T ss_pred -------CCHH--HHH-HHHHHhcCC-------------CCCchHHHHHHHHHhhcCCCc--hhhccccceeEeecCcCc
Confidence 1111 222 333333221 237889999999986 34332 222356778899999999
Q ss_pred eeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchh
Q 043305 426 RGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEE 505 (892)
Q Consensus 426 ~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~ 505 (892)
+|++.+. + +.+.|||+|.+++.|.. +|... .+++.+.+++++++|+|++++|+
T Consensus 380 ~~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~------------ 432 (679)
T PRK01122 380 MSGVDLD---G--REIRKGAVDAIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE------------ 432 (679)
T ss_pred eEEEEEC---C--EEEEECCHHHHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE------------
Confidence 9988653 3 57899999999999953 23211 24577788999999999999994
Q ss_pred hhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhh
Q 043305 506 ELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSF 585 (892)
Q Consensus 506 ~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~ 585 (892)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++|||.
T Consensus 433 ----------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId----------------- 485 (679)
T PRK01122 433 ----------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD----------------- 485 (679)
T ss_pred ----------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-----------------
Confidence 45799999999999999999999999999999999999999999999999995
Q ss_pred hhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccE
Q 043305 586 RALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDI 665 (892)
Q Consensus 586 ~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDi 665 (892)
.++||++|+||.++|+.+|++|++|||||||+||+|||++|||||||| +|||+|||+||+
T Consensus 486 -------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADi 545 (679)
T PRK01122 486 -------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNM 545 (679)
T ss_pred -------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCE
Confidence 389999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 666 IILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVA 702 (892)
Q Consensus 666 il~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~ 702 (892)
|++||||++|+++++|||++.-.--..-.|++. |-+
T Consensus 546 VLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~-n~~ 581 (679)
T PRK01122 546 VDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA-NDV 581 (679)
T ss_pred EEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH-HHH
Confidence 999999999999999999999777777888877 444
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-66 Score=628.54 Aligned_cols=569 Identities=22% Similarity=0.288 Sum_probs=441.8
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceecCcEEEEEEeeccccccccceEEeeccccccchhhhHHHH
Q 043305 188 PRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKI 267 (892)
Q Consensus 188 ~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (892)
|+.|+....+.+-....-...+++..|.+.+++.+++.. ++.. . .+..++.... +........
T Consensus 265 ~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~--------~~~~-~----~~~~~~~~~~----~~~~~~~~~ 327 (1151)
T KOG0206|consen 265 PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTR--------QDGR-H----NGEWWYLSPS----EAAYAGFVH 327 (1151)
T ss_pred CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeee--------eccc-c----cCchhhhcCc----hHHHHHHHH
Confidence 566666777777677777777777888888887777642 0000 0 0000011000 012234556
Q ss_pred HHHHHHHhhhcccCCchhHHHHHHHHHH------HHHHhC----CceeeccccccccCceeEEEeCCCCCcccCceEEEE
Q 043305 268 LTVAVTIVVVAVPEGLPLAVTLTLAYSM------RKMMAD----KALVRRLSACETMGSATTICSDKTGTLTLNQMTVVE 337 (892)
Q Consensus 268 ~~~avtilvvavPegLplavtl~la~~~------~~m~k~----~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~ 337 (892)
|..++.+....||-+|...+.+.-.+.. ..|..+ .+.+|..+..|.||++++|.+|||||||+|.|++.+
T Consensus 328 f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~k 407 (1151)
T KOG0206|consen 328 FLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKK 407 (1151)
T ss_pred HHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeec
Confidence 7778888999999999988777655544 334433 577999999999999999999999999999999999
Q ss_pred EEeCCcccCCCCC--------CC-----------------C---------CCHHHHHHHHHHHHhcCCCccccCCCC-CC
Q 043305 338 AYVGGRKMNPTDS--------NS-----------------Q---------LSPMVTSLLVEGIAQNTTGSVYLPPNG-GE 382 (892)
Q Consensus 338 ~~~~~~~~~~~~~--------~~-----------------~---------~~~~~~~ll~~~i~~n~~~~~~~~~~~-~~ 382 (892)
+.++|..|..... .+ . ..+.....+..+.++||+......+++ ..
T Consensus 408 Csi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~ 487 (1151)
T KOG0206|consen 408 CSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKL 487 (1151)
T ss_pred ccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccce
Confidence 9999877653210 00 0 111223455667888888654332222 34
Q ss_pred ccccCChHHHHHHHHHHHcCCChhhh------------hcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeee
Q 043305 383 AEVSGSPTEKAILQWGMKLGMNFEAV------------RSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVL 450 (892)
Q Consensus 383 ~~~~g~ptE~ALl~~a~~~g~~~~~~------------r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL 450 (892)
.+...+|+|.|+++.|++.|+.+-.. ..+++++++.+|||.||||||+||.++|++++|||||+.+|.
T Consensus 488 ~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~ 567 (1151)
T KOG0206|consen 488 SYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIF 567 (1151)
T ss_pred eeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhH
Confidence 56778999999999999999865332 237899999999999999999999999999999999999999
Q ss_pred ccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh----------------hhhccCCC
Q 043305 451 DSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE----------------LSRWALPE 514 (892)
Q Consensus 451 ~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~----------------~~~~~~~e 514 (892)
+++.. -.+..+++..++++++|.+||||||+|||+++++++..... .+..+.+|
T Consensus 568 erL~~----------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iE 637 (1151)
T KOG0206|consen 568 ERLSK----------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIE 637 (1151)
T ss_pred hhhhh----------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHH
Confidence 99975 12345667788999999999999999999998766543111 12245689
Q ss_pred CCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC---------------------
Q 043305 515 DDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD--------------------- 573 (892)
Q Consensus 515 ~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~--------------------- 573 (892)
+||+++|..+|||++++||+++|+.|++||||+||+|||..+||.+||..|+++.++..
T Consensus 638 k~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~ 717 (1151)
T KOG0206|consen 638 KDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAAL 717 (1151)
T ss_pred hcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999986432
Q ss_pred ---------------------CCCCceecchhhhhcCHHHHHHHhcc--cccceEEEeccCHhhHHHHHHHHHHc-CCeE
Q 043305 574 ---------------------ATEPNIIEGKSFRALSETQREEIAGE--DFGMICVMGRSSPSDKLLLVQALRKR-GDVV 629 (892)
Q Consensus 574 ---------------------~~~~~vi~G~~~~~l~~~e~~~i~~~--~~~~~~V~aR~sP~dK~~lV~~Lq~~-g~vV 629 (892)
...+++++|+.+...-+++.+..+.+ .-|+..++||+||.||..+|+..++. +.++
T Consensus 718 ~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~T 797 (1151)
T KOG0206|consen 718 KETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVT 797 (1151)
T ss_pred HHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceE
Confidence 13568889988876433322222221 24688999999999999999999854 8999
Q ss_pred EEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 630 AVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV-RWGRSVYANIQKFIQFQLTVNVAALVINF 708 (892)
Q Consensus 630 a~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i-~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~ 708 (892)
+++|||+||.+|+++|||||.++..+-..|..+||+.|.. |+.+.+++ .|||+.|.|+.|++.|.+++|+...++.|
T Consensus 798 LAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~f 875 (1151)
T KOG0206|consen 798 LAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLF 875 (1151)
T ss_pred EEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999966544445699999999998 99999997 89999999999999999999999999999
Q ss_pred HHHHhc---CCCchhHHHHHHHHhhhhhhhhhhccc--CCCCccccccCCC----CCCCCCccHHHHHHHHHHHHHHHHH
Q 043305 709 VAAVSS---GDVPLNAVQLLWVNLIMDTLGALALAT--EPPTDHLMQRSPV----GRREPLITNIMWRNLLIQASYQVSV 779 (892)
Q Consensus 709 ~~~~~~---~~~pl~~vqlLwvnli~d~l~alaLa~--e~p~~~lm~r~P~----~r~~~li~~~m~~~i~~~ai~q~~v 779 (892)
.+.++. +...+..+++..+|+++..+|.++||. ...+.+.+.+.|. ++..-++++.-++.++..++||.++
T Consensus 876 wy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli 955 (1151)
T KOG0206|consen 876 WYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLV 955 (1151)
T ss_pred HhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhhee
Confidence 998875 457889999999999999999999985 3334444445552 4555677877777888999999998
Q ss_pred HHHHHH
Q 043305 780 LLVLNF 785 (892)
Q Consensus 780 ~~~l~~ 785 (892)
+|++.+
T Consensus 956 ~Ff~~~ 961 (1151)
T KOG0206|consen 956 IFFLPY 961 (1151)
T ss_pred eeeeeH
Confidence 887644
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-60 Score=561.25 Aligned_cols=337 Identities=26% Similarity=0.406 Sum_probs=286.8
Q ss_pred HHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccC
Q 043305 267 ILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMN 346 (892)
Q Consensus 267 ~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~ 346 (892)
.+.++++++|++|||+|+...+.....|++||+|+|+++|++++||+||++|+||||||||||+|+|+|++++..+.
T Consensus 249 ~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~--- 325 (675)
T TIGR01497 249 SVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG--- 325 (675)
T ss_pred HHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC---
Confidence 36677999999999988777777777899999999999999999999999999999999999999999999874211
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCce
Q 043305 347 PTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKR 426 (892)
Q Consensus 347 ~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~ 426 (892)
.++ .+++ ..++.++.. ..||+++||++++.+.|.+.... .++..+..||++.+|+
T Consensus 326 -------~~~--~~ll-~~aa~~~~~-------------s~hP~a~Aiv~~a~~~~~~~~~~--~~~~~~~~pf~~~~~~ 380 (675)
T TIGR01497 326 -------VDE--KTLA-DAAQLASLA-------------DDTPEGKSIVILAKQLGIREDDV--QSLHATFVEFTAQTRM 380 (675)
T ss_pred -------CcH--HHHH-HHHHHhcCC-------------CCCcHHHHHHHHHHHcCCCcccc--ccccceEEEEcCCCcE
Confidence 111 1222 233333221 25899999999999877654322 2355678999999888
Q ss_pred eEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh
Q 043305 427 GGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE 506 (892)
Q Consensus 427 msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~ 506 (892)
|++.+. ++ +.++||++|.+++.|.. +|... .+.+.+.+++++++|+|++++|+
T Consensus 381 sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~------~~~~~~~~~~~a~~G~r~l~va~------------- 433 (675)
T TIGR01497 381 SGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHI------PTDLDQAVDQVARQGGTPLVVCE------------- 433 (675)
T ss_pred EEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCC------cHHHHHHHHHHHhCCCeEEEEEE-------------
Confidence 887543 33 56899999999988852 22221 23567788999999999999995
Q ss_pred hhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhh
Q 043305 507 LSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFR 586 (892)
Q Consensus 507 ~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~ 586 (892)
|.+++|+++++||+|||++++|++||++||+++|+||||..||.++|+++||.
T Consensus 434 ---------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~------------------ 486 (675)
T TIGR01497 434 ---------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD------------------ 486 (675)
T ss_pred ---------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------------
Confidence 24799999999999999999999999999999999999999999999999995
Q ss_pred hcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEE
Q 043305 587 ALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDII 666 (892)
Q Consensus 587 ~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDii 666 (892)
.++||++|+||..+|+.+|++|+.|+|+|||+||+|||++|||||||| +|+++||++||++
T Consensus 487 ------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadiv 547 (675)
T TIGR01497 487 ------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMV 547 (675)
T ss_pred ------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEE
Confidence 378999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 667 ILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAAL 704 (892)
Q Consensus 667 l~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~ 704 (892)
++||||++|+++++|||+++-+...+..|++..+++-.
T Consensus 548 Lldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~ 585 (675)
T TIGR01497 548 DLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKY 585 (675)
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHH
Confidence 99999999999999999999999999999998877643
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-61 Score=535.40 Aligned_cols=578 Identities=23% Similarity=0.306 Sum_probs=432.5
Q ss_pred HHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCC----ceeeccccccccCceeEEEeCCCCCcccCceEEEEEE
Q 043305 264 AIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADK----ALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAY 339 (892)
Q Consensus 264 ~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~----~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~ 339 (892)
|-.+++..+-+.-..||-.|-.-+-++-.+-.+.+.+|. .+||....-|+||++.++.+|||||||+|+|.++++.
T Consensus 350 wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiH 429 (1051)
T KOG0210|consen 350 WYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIH 429 (1051)
T ss_pred hHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeee
Confidence 445556666677777999999999999888888888875 5699999999999999999999999999999999999
Q ss_pred eCCcccCCC----------------CC---------CCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHH
Q 043305 340 VGGRKMNPT----------------DS---------NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAI 394 (892)
Q Consensus 340 ~~~~~~~~~----------------~~---------~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~AL 394 (892)
+|...|..+ .. ..+++..+.++ ..+++.||+.....++++...++..+|+|.||
T Consensus 430 LGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~-V~alalCHNVTPv~e~~ge~sYQAaSPDEVAi 508 (1051)
T KOG0210|consen 430 LGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNA-VLALALCHNVTPVFEDDGEVSYQAASPDEVAI 508 (1051)
T ss_pred eeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHH-HHHHHHhccCCcccCCCceEEeecCCCCeEEE
Confidence 875443211 00 12233334443 34556666555555555556778899999999
Q ss_pred HHHHHHcCCChhhh-------------hcccceeeeeccccCCceeEEEEecC-CCcEEEEEcCceeeeeccccccccCC
Q 043305 395 LQWGMKLGMNFEAV-------------RSECSVLHVFPFNSLKKRGGVAVQLP-NSEVHIHWKGAAEIVLDSCTGYIDTD 460 (892)
Q Consensus 395 l~~a~~~g~~~~~~-------------r~~~~i~~~~pF~S~rK~msvvv~~~-~~~~~~~~KGA~e~IL~~C~~~~~~~ 460 (892)
++|....|+..... ..+|+|+++|||+|+.|||+++|+.+ .+++..|.|||.-++-...+.
T Consensus 509 VkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----- 583 (1051)
T KOG0210|consen 509 VKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----- 583 (1051)
T ss_pred EEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc-----
Confidence 99999888754322 12799999999999999999999987 678999999998877554321
Q ss_pred CcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh---------------hh--hccCCCCCcEEEEEE
Q 043305 461 DRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE---------------LS--RWALPEDDLVLLAIV 523 (892)
Q Consensus 461 g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~---------------~~--~~~~~e~~l~~lGlv 523 (892)
-+.+++....||++||||+.+|.|.++.+++...+. .. ....+|+||.++|+.
T Consensus 584 ----------NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LT 653 (1051)
T KOG0210|consen 584 ----------NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLT 653 (1051)
T ss_pred ----------chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhccc
Confidence 246778889999999999999999998665432211 00 012578999999999
Q ss_pred EecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC-----------------------CCCCcee
Q 043305 524 GIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD-----------------------ATEPNII 580 (892)
Q Consensus 524 gi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~-----------------------~~~~~vi 580 (892)
|.||.++++|+.+++.||+|||+|||+|||..+||..||+..++...+.. .+.+++|
T Consensus 654 GVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi 733 (1051)
T KOG0210|consen 654 GVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVI 733 (1051)
T ss_pred ChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEE
Confidence 99999999999999999999999999999999999999999999976542 3457899
Q ss_pred cchhhh---hcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHc-CCeEEEeCCCCCChHhhhcCCeeEeecCCCc
Q 043305 581 EGKSFR---ALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKR-GDVVAVTGDGTNDAPALHEADIGLAMGIQGT 656 (892)
Q Consensus 581 ~G~~~~---~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~-g~vVa~tGDG~NDapALk~AdVGIAmgi~gt 656 (892)
+|+.+. ++-++|+.++..+. ...|+|||+|+||+++++.||++ |..|+++|||-||..|+++||+||.+-....
T Consensus 734 ~G~Sl~~cl~yye~Ef~el~~~~--~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEG 811 (1051)
T KOG0210|consen 734 DGESLEFCLKYYEDEFIELVCEL--PAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEG 811 (1051)
T ss_pred cCchHHHHHHHHHHHHHHHHHhc--CcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccc
Confidence 998775 34567777766533 67899999999999999999986 8999999999999999999999995432333
Q ss_pred HhhhhcccEEEcCCCchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHH---HHHHHhhhh
Q 043305 657 EVAKESSDIIILDDNFASVVKVVR-WGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQ---LLWVNLIMD 732 (892)
Q Consensus 657 ~vAkeaaDiil~ddnf~sIv~~i~-~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vq---lLwvnli~d 732 (892)
..|.-|||+.|.+ |+.+-+++. +||+.|.+-.|.-||.+...+...+++.+++....+.|..-.| |.-+..+.+
T Consensus 812 kQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YT 889 (1051)
T KOG0210|consen 812 KQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYT 889 (1051)
T ss_pred cccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHH
Confidence 4588899999998 999999985 5999999999999999999998888888887777666666555 445677788
Q ss_pred hhhhhhcccCCCC-ccccccCCC----CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCcccccccchh
Q 043305 733 TLGALALATEPPT-DHLMQRSPV----GRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNT 807 (892)
Q Consensus 733 ~l~alaLa~e~p~-~~lm~r~P~----~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~~~~~~~~~~~~~T 807 (892)
.+|.++|..+.-- +++-...|. -.++..++.+.+..|+..++||..++.+..+. ++. .......+
T Consensus 890 mlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~---l~~-------~ef~~iva 959 (1051)
T KOG0210|consen 890 MLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALL---LFD-------TEFIHIVA 959 (1051)
T ss_pred HhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHH---Hhh-------hhheEeee
Confidence 8999999875432 222222331 12233344444555577899998887654221 111 11233456
Q ss_pred HHHHHHHHHHHhhh-hcccCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcccccc-CChHHHHHHHHHHH
Q 043305 808 LIFNSFVLCQIFNE-FNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTR-LNWKHWIISVVIGF 882 (892)
Q Consensus 808 ~~F~~fV~~qvfn~-~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~v~~~~~~f~~~~-L~~~~w~~~i~~~~ 882 (892)
+.|.++++..+... +..+ ..+|..+..-++++.+.++.+++++.+|+..- ++|.+.+...++.+
T Consensus 960 isFtaLi~tELiMVaLtv~-----------tw~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~ 1025 (1051)
T KOG0210|consen 960 ISFTALILTELIMVALTVR-----------TWHWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITL 1025 (1051)
T ss_pred eeeHHHHHHHHHHHhhhhh-----------hhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 77777776655432 2222 23566666777888888888999999887654 44443333333333
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-57 Score=504.26 Aligned_cols=395 Identities=25% Similarity=0.430 Sum_probs=315.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEE----EEeCCcccCCCCCCCCC
Q 043305 279 VPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVE----AYVGGRKMNPTDSNSQL 354 (892)
Q Consensus 279 vPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~----~~~~~~~~~~~~~~~~~ 354 (892)
||-|||..+|.++|.|..+|+++|++++++.|+|.|+.++++|||||||||.|+++|.+ ++..| .
T Consensus 289 iPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g-----------v 357 (942)
T KOG0205|consen 289 IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG-----------V 357 (942)
T ss_pred cccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC-----------C
Confidence 99999999999999999999999999999999999999999999999999999999987 33322 2
Q ss_pred CHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecC
Q 043305 355 SPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLP 434 (892)
Q Consensus 355 ~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~ 434 (892)
+++.. +|..+.+. .+ + + -|..|.|+++.... .++.|..++.++..|||+..||-+..+..+
T Consensus 358 ~~D~~-~L~A~rAs----r~---e--n-----~DAID~A~v~~L~d----PKeara~ikevhF~PFnPV~Krta~ty~d~ 418 (942)
T KOG0205|consen 358 DKDDV-LLTAARAS----RK---E--N-----QDAIDAAIVGMLAD----PKEARAGIKEVHFLPFNPVDKRTALTYIDP 418 (942)
T ss_pred ChHHH-HHHHHHHh----hh---c--C-----hhhHHHHHHHhhcC----HHHHhhCceEEeeccCCccccceEEEEECC
Confidence 22222 22222221 11 1 1 36789999886543 578889999999999999999999999999
Q ss_pred CCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCC
Q 043305 435 NSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPE 514 (892)
Q Consensus 435 ~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e 514 (892)
+|+.+..+|||||.|++.|.. +.+.++.+.+.+++||++|+|.+++||+..++.. .+...
T Consensus 419 dG~~~r~sKGAPeqil~l~~~-----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~---------~~~~g 478 (942)
T KOG0205|consen 419 DGNWHRVSKGAPEQILKLCNE-----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKT---------KESPG 478 (942)
T ss_pred CCCEEEecCCChHHHHHHhhc-----------cCcchHHHHHHHHHHHHhcchhhhhhhhcccccc---------ccCCC
Confidence 999999999999999999963 3455778999999999999999999998876431 12234
Q ss_pred CCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhh-hhcCHHHH
Q 043305 515 DDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSF-RALSETQR 593 (892)
Q Consensus 515 ~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~-~~l~~~e~ 593 (892)
....|+|+.-+-||+|.+..++|+....-|++|.|+|||...-++..++++|+-++-.... .+-|.+- ..+...+.
T Consensus 479 ~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss---~llG~~~~~~~~~~~v 555 (942)
T KOG0205|consen 479 GPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS---ALLGLGKDGSMPGSPV 555 (942)
T ss_pred CCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCch---hhccCCCCCCCCCCcH
Confidence 5578999999999999999999999999999999999999999999999999865422110 1111110 11222234
Q ss_pred HHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCch
Q 043305 594 EEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFA 673 (892)
Q Consensus 594 ~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~ 673 (892)
++.+. +..-||-+.|++|+.+|+.||++|+.|+|||||+||+||||+||+|||+. ..|+.|+.+||||+++..++
T Consensus 556 ~elie----~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglS 630 (942)
T KOG0205|consen 556 DELIE----KADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLS 630 (942)
T ss_pred HHHhh----hccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCch
Confidence 44555 66789999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhh
Q 043305 674 SVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMD 732 (892)
Q Consensus 674 sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d 732 (892)
-|+.++..+|.+|.+++.+..|.++..+-.+ +.|.....-...-++|...+.+-++-|
T Consensus 631 viI~avltSraIfqrmknytiyavsitiriv-~gfml~alIw~~df~pfmvliiailnd 688 (942)
T KOG0205|consen 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIV-FGFMLIALIWEFDFSPFMVLIIAILND 688 (942)
T ss_pred hhHHHHHHHHHHHHHHhhheeeeehhHHHHH-HHHHHHHHHHHhcCCHHHHHHHHHhcC
Confidence 9999999999999999999888877655433 222222222334455555555554444
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-54 Score=502.32 Aligned_cols=322 Identities=42% Similarity=0.664 Sum_probs=287.4
Q ss_pred HHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCc
Q 043305 264 AIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR 343 (892)
Q Consensus 264 ~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~ 343 (892)
+...+..++++++++|||+||++++++++++..+|+++|+++|+++++|+||++++||||||||||+|+|+|++++..+.
T Consensus 177 ~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~ 256 (499)
T TIGR01494 177 IFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG 256 (499)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999875321
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccC
Q 043305 344 KMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSL 423 (892)
Q Consensus 344 ~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~ 423 (892)
.+.++||.|.|+++++++. .++..||++.
T Consensus 257 ---------------------------------------~~~s~hp~~~ai~~~~~~~------------~~~~~~f~~~ 285 (499)
T TIGR01494 257 ---------------------------------------EYLSGHPDERALVKSAKWK------------ILNVFEFSSV 285 (499)
T ss_pred ---------------------------------------CcCCCChHHHHHHHHhhhc------------CcceeccCCC
Confidence 0125799999999998652 1356899999
Q ss_pred CceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCc
Q 043305 424 KKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPD 503 (892)
Q Consensus 424 rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~ 503 (892)
+|+|+++++.+++ .++||+++.+++.|.. +.+.+++++.+|+|++++||+.
T Consensus 286 ~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------------~~~~~~~~~~~g~~~~~~a~~~-------- 336 (499)
T TIGR01494 286 RKRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------------LEEKVKELAQSGLRVLAVASKE-------- 336 (499)
T ss_pred CceEEEEEecCCc---EEEeCCHHHHHHhhHH------------------HHHHHHHHHhCCCEEEEEEECC--------
Confidence 9999999885333 3789999999988852 2234456788999999999742
Q ss_pred hhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecch
Q 043305 504 EEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGK 583 (892)
Q Consensus 504 ~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~ 583 (892)
+++|+++++|++|++++++|+.|+++|++++|+|||+..||..+|+++||
T Consensus 337 --------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------- 386 (499)
T TIGR01494 337 --------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------- 386 (499)
T ss_pred --------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc----------------
Confidence 58999999999999999999999999999999999999999999999986
Q ss_pred hhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcc
Q 043305 584 SFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESS 663 (892)
Q Consensus 584 ~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaa 663 (892)
++|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||||| |+++|
T Consensus 387 -----------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~a 437 (499)
T TIGR01494 387 -----------------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAA 437 (499)
T ss_pred -----------------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhC
Confidence 3678999999999999999999999999999999999999999997 79999
Q ss_pred cEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhh
Q 043305 664 DIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALA 738 (892)
Q Consensus 664 Diil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~ala 738 (892)
|+++++|++..+..++++||+++.+|++++.|.+++|++.+.+.+.+.+ +|+++|+.++++
T Consensus 438 divl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~--------------~~~~~~~~~~~~ 498 (499)
T TIGR01494 438 DIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV--------------LNLVPPGLAALA 498 (499)
T ss_pred CeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHhcchhhhc
Confidence 9999999999999999999999999999999999999997777665431 888888887765
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-53 Score=479.79 Aligned_cols=560 Identities=20% Similarity=0.245 Sum_probs=395.4
Q ss_pred HHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCCC
Q 043305 273 TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNS 352 (892)
Q Consensus 273 tilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~ 352 (892)
-|+...||+.||+-+++|.--+...++|.+++|..+-.+--.|++++.|||||||||+..|.|..+--....-....+.+
T Consensus 435 LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s 514 (1160)
T KOG0209|consen 435 LILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPAS 514 (1160)
T ss_pred EEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchh
Confidence 35666799999999999999999999999999999999999999999999999999999999987653111110111222
Q ss_pred CCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHH-cC-CChhhhh----cccceeeeeccccCCce
Q 043305 353 QLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMK-LG-MNFEAVR----SECSVLHVFPFNSLKKR 426 (892)
Q Consensus 353 ~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~-~g-~~~~~~r----~~~~i~~~~pF~S~rK~ 426 (892)
..+.+..+ .+++||+.-. .++ ..+|||.|+|.+++... +. .+...-| ...+|.+.+.|+|+-||
T Consensus 515 ~~p~~t~~----vlAscHsLv~-le~-----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKR 584 (1160)
T KOG0209|consen 515 KAPNETVL----VLASCHSLVL-LED-----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKR 584 (1160)
T ss_pred hCCchHHH----HHHHHHHHHH-hcC-----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHH
Confidence 23333322 3455555322 111 27899999999987521 10 0100111 14678999999999999
Q ss_pred eEEEEecCC----CcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCC
Q 043305 427 GGVAVQLPN----SEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIP 502 (892)
Q Consensus 427 msvvv~~~~----~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~ 502 (892)
|+|++...+ -++.+.+|||||.|-++-+. ..+.+.++..+++++|.||||++||++..-...
T Consensus 585 msvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d--------------vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~ 650 (1160)
T KOG0209|consen 585 MSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD--------------VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVS 650 (1160)
T ss_pred HHhhhhcccCCCceEEEEEecCCHHHHHHHHHh--------------CchhHHHHHHHHhhccceEEEEecccccccchh
Confidence 999987543 25889999999999776542 234577888999999999999999999732111
Q ss_pred chhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcC----------
Q 043305 503 DEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEA---------- 572 (892)
Q Consensus 503 ~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~---------- 572 (892)
+....+++..|+||+|.|++.+.-|+|++++++|+.+++++.+|+||||||+.||.++|+++||.....
T Consensus 651 -q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~ 729 (1160)
T KOG0209|consen 651 -QVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGD 729 (1160)
T ss_pred -hhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCC
Confidence 111234667899999999999999999999999999999999999999999999999999999975410
Q ss_pred C--------------------------CCCCceecchhhhhcCH-HHHHHHhcccccceEEEeccCHhhHHHHHHHHHHc
Q 043305 573 D--------------------------ATEPNIIEGKSFRALSE-TQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKR 625 (892)
Q Consensus 573 ~--------------------------~~~~~vi~G~~~~~l~~-~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~ 625 (892)
. ..+.++++|..+..+.. +++.++++ ++.||||++|.||..++..|++.
T Consensus 730 ~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~----hv~VfARvaP~QKE~ii~tlK~~ 805 (1160)
T KOG0209|consen 730 GNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIP----HVWVFARVAPKQKEFIITTLKKL 805 (1160)
T ss_pred CceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhh----heeEEEeeChhhHHHHHHHHHhc
Confidence 0 12346778888887654 46788888 99999999999999999999999
Q ss_pred CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHh-----------------------------------------------
Q 043305 626 GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV----------------------------------------------- 658 (892)
Q Consensus 626 g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~v----------------------------------------------- 658 (892)
|++++|+|||+||..|||+||||||+- ++++.
T Consensus 806 Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 884 (1160)
T KOG0209|consen 806 GYVTLMCGDGTNDVGALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKT 884 (1160)
T ss_pred CeEEEEecCCCcchhhhhhcccceehh-cCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHH
Confidence 999999999999999999999999984 22210
Q ss_pred ------------------------hhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043305 659 ------------------------AKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSS 714 (892)
Q Consensus 659 ------------------------AkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~ 714 (892)
|.-||.+.-.-.+.++|-+.|+.|||..-+.-+..... .-|.. +....++.++.
T Consensus 885 ~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKIL-ALN~L-isAYslSvlyl 962 (1160)
T KOG0209|consen 885 RERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKIL-ALNCL-ISAYSLSVLYL 962 (1160)
T ss_pred HHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHH-HHHHH-HHHHHHHHhhh
Confidence 00122222223367889999999999987654333221 12211 11122334445
Q ss_pred CCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC
Q 043305 715 GDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLE 794 (892)
Q Consensus 715 ~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~ 794 (892)
...-++..|...--+++- ..-+.+...+|-+.|.+..|. .++++......++.|-..++..++++.-.... ..-+
T Consensus 963 dGVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~-~~p~ 1037 (1160)
T KOG0209|consen 963 DGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYK-LEPP 1037 (1160)
T ss_pred cCceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHh-cCCc
Confidence 567788888776655543 345566678899999988885 45777776666777766666555444322111 1111
Q ss_pred CC----CcccccccchhHHHHHHHHHHHhh-hhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHHH----HHhhhccc
Q 043305 795 SD----SNAHSNKVKNTLIFNSFVLCQIFN-EFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILII----QFLGKFAS 865 (892)
Q Consensus 795 ~~----~~~~~~~~~~T~~F~~fV~~qvfn-~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~v----~~~~~~f~ 865 (892)
.. .....+...+|.+|..-...|+.. .+|-+ ..++.+.+..|+.++..++++..+-+.++ +=++..|.
T Consensus 1038 ~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAVNY~---G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~ 1114 (1160)
T KOG0209|consen 1038 EEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAVNYQ---GRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFE 1114 (1160)
T ss_pred ccccChhcccChhhhhhHHHHHHHHHHHHHhhhhcc---CcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhhee
Confidence 00 112345667888888777778765 45554 34666788889877766555444333332 33677888
Q ss_pred cccCChH
Q 043305 866 TTRLNWK 872 (892)
Q Consensus 866 ~~~L~~~ 872 (892)
.++++-.
T Consensus 1115 lV~mp~~ 1121 (1160)
T KOG0209|consen 1115 LVDMPQD 1121 (1160)
T ss_pred eecccHH
Confidence 9888744
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-52 Score=491.56 Aligned_cols=371 Identities=29% Similarity=0.377 Sum_probs=294.1
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceecCcEEEEEEeeccccccccceEEeeccccccchhhhHHHHHH
Q 043305 190 KKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILT 269 (892)
Q Consensus 190 ~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (892)
...|+-.+-+.+.+......+-++.|+++++++... +. ..+...+.
T Consensus 312 q~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~-------------~~---------------------~~~~~a~~ 357 (713)
T COG2217 312 QSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLF-------------GG---------------------GDWETALY 357 (713)
T ss_pred hhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHh-------------cC---------------------CcHHHHHH
Confidence 345666778888888877775666666666643211 00 12667899
Q ss_pred HHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCC
Q 043305 270 VAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTD 349 (892)
Q Consensus 270 ~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~ 349 (892)
.+++++|++|||+|.+++++++..++.+.+++|+|+|+..++|+++++++|+||||||||+|+|+|+++...+. +
T Consensus 358 ~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--- 432 (713)
T COG2217 358 RALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--- 432 (713)
T ss_pred HHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999876432 1
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEE
Q 043305 350 SNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGV 429 (892)
Q Consensus 350 ~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msv 429 (892)
.++++. .+.+.. ..+.||...||++++.+.|.. .. + +|.+.
T Consensus 433 -----e~~~L~---laAalE--------------~~S~HPiA~AIv~~a~~~~~~--~~----~-----~~~~i------ 473 (713)
T COG2217 433 -----EDELLA---LAAALE--------------QHSEHPLAKAIVKAAAERGLP--DV----E-----DFEEI------ 473 (713)
T ss_pred -----HHHHHH---HHHHHH--------------hcCCChHHHHHHHHHHhcCCC--Cc----c-----ceeee------
Confidence 122332 222221 225799999999998876621 10 1 12111
Q ss_pred EEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhh
Q 043305 430 AVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSR 509 (892)
Q Consensus 430 vv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~ 509 (892)
++.++...+.| +.++-...+++..++.. .+. ..+..+.+.++|..++.++.
T Consensus 474 ----~G~Gv~~~v~g--~~v~vG~~~~~~~~~~~--~~~-----~~~~~~~~~~~G~t~v~va~---------------- 524 (713)
T COG2217 474 ----PGRGVEAEVDG--ERVLVGNARLLGEEGID--LPL-----LSERIEALESEGKTVVFVAV---------------- 524 (713)
T ss_pred ----ccCcEEEEECC--EEEEEcCHHHHhhcCCC--ccc-----hhhhHHHHHhcCCeEEEEEE----------------
Confidence 22233333333 11111112232222211 111 45567788889988888874
Q ss_pred ccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcC
Q 043305 510 WALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALS 589 (892)
Q Consensus 510 ~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~ 589 (892)
|-.++|++++.|++||+++++|++||+.||++.|+||||..+|++||+++||.
T Consensus 525 ------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId--------------------- 577 (713)
T COG2217 525 ------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID--------------------- 577 (713)
T ss_pred ------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH---------------------
Confidence 33799999999999999999999999999999999999999999999999995
Q ss_pred HHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcC
Q 043305 590 ETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILD 669 (892)
Q Consensus 590 ~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~d 669 (892)
.|+|.+.|+||.++|+.||++|++|+|+|||+||+|||.+|||||||| +|||+|+|+||++|++
T Consensus 578 ---------------~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~ 641 (713)
T COG2217 578 ---------------EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMR 641 (713)
T ss_pred ---------------hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEec
Confidence 488999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 670 DNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVA 710 (892)
Q Consensus 670 dnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~ 710 (892)
|++..++++++.+|.++.+|++++.|.+.+|++++.+...+
T Consensus 642 ~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 642 DDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999988877765
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-49 Score=484.07 Aligned_cols=382 Identities=25% Similarity=0.328 Sum_probs=298.3
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceecCcEEEEEEeeccccccccceEEeeccccccchhhhHHHHHHH
Q 043305 191 KGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTV 270 (892)
Q Consensus 191 ~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (892)
..|+-++.+.+.+-.....+.++.|++.++++.. +.+ ..|...+..
T Consensus 344 ~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~------------~~~----------------------~~~~~~i~~ 389 (741)
T PRK11033 344 ERRAPIERFIDRFSRIYTPAIMLVALLVILVPPL------------LFA----------------------APWQEWIYR 389 (741)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------Hcc----------------------CCHHHHHHH
Confidence 3466677788888766655555555554444311 000 124556788
Q ss_pred HHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCC
Q 043305 271 AVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS 350 (892)
Q Consensus 271 avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~ 350 (892)
++++++++|||+|.+++++++..++.+++|+|+++|+.+++|+|+++++||||||||||+|+|+|++++..+.
T Consensus 390 a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~------- 462 (741)
T PRK11033 390 GLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG------- 462 (741)
T ss_pred HHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC-------
Confidence 9999999999999999999999999999999999999999999999999999999999999999999875321
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeE-E
Q 043305 351 NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGG-V 429 (892)
Q Consensus 351 ~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~ms-v 429 (892)
.+++ +++..+.+.. ..+.||.++||++++.+.+.+ +||.++++.+. .
T Consensus 463 ---~~~~--~~l~~aa~~e--------------~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~ 510 (741)
T PRK11033 463 ---ISES--ELLALAAAVE--------------QGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGS 510 (741)
T ss_pred ---CCHH--HHHHHHHHHh--------------cCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeE
Confidence 1121 1222221111 124799999999999876643 46777777653 1
Q ss_pred EEec-CCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhh
Q 043305 430 AVQL-PNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELS 508 (892)
Q Consensus 430 vv~~-~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~ 508 (892)
-++. -+|.. +.-|+++.+.+ ++ +.+.+.++++..+|.|++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~--------------~~----~~~~~~~~~~~~~g~~~v~va~--------------- 555 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP--------------LA----DAFAGQINELESAGKTVVLVLR--------------- 555 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh--------------cc----HHHHHHHHHHHhCCCEEEEEEE---------------
Confidence 1221 12221 22366654421 12 2344567789999999999996
Q ss_pred hccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhc
Q 043305 509 RWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRAL 588 (892)
Q Consensus 509 ~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l 588 (892)
|.+++|+++++||+|||++++|++|+++||+++|+|||+..+|.++|+++||.
T Consensus 556 -------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------- 608 (741)
T PRK11033 556 -------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------- 608 (741)
T ss_pred -------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--------------------
Confidence 34799999999999999999999999999999999999999999999999994
Q ss_pred CHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEc
Q 043305 589 SETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIIL 668 (892)
Q Consensus 589 ~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ 668 (892)
++++.+|+||..+|+.||+. +.|+|+|||.||+|||++|||||||| +|+++++++||++++
T Consensus 609 -----------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~ 669 (741)
T PRK11033 609 -----------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALT 669 (741)
T ss_pred -----------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEe
Confidence 24567899999999999965 68999999999999999999999999 899999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhh
Q 043305 669 DDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGAL 737 (892)
Q Consensus 669 ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~al 737 (892)
+|++..|.+++++||.++.||++++.|.+.+|++.+.+.+++.+ | +|+..+.+.+.++
T Consensus 670 ~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~~-----~------~~~a~~~~~~ss~ 727 (741)
T PRK11033 670 HNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGIT-----G------LWLAVLADSGATA 727 (741)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----H------HHHHHHHHcChHH
Confidence 99999999999999999999999999999999988777654321 1 5777776655444
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-48 Score=457.46 Aligned_cols=373 Identities=28% Similarity=0.370 Sum_probs=302.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceecCcEEEEEEeeccccccccceEEeeccccccchhhhHHHHHHHH
Q 043305 192 GRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVA 271 (892)
Q Consensus 192 ~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 271 (892)
+++-++...+.+-+.+..+.++.|++.+++..... .. ..+..+
T Consensus 158 ~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~------------------------------------~~-~~~~~~ 200 (556)
T TIGR01525 158 SKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG------------------------------------AL-GALYRA 200 (556)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------------------------------cc-hHHHHH
Confidence 45567777888877777766666666665543210 01 567889
Q ss_pred HHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCC
Q 043305 272 VTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSN 351 (892)
Q Consensus 272 vtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~ 351 (892)
+++++++|||+||+++++++++++++|+++|++||+++++|++|++++||||||||||+|+|+|.+++..+...
T Consensus 201 ~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~------ 274 (556)
T TIGR01525 201 LAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS------ 274 (556)
T ss_pred HHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC------
Confidence 99999999999999999999999999999999999999999999999999999999999999999987643211
Q ss_pred CCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEE
Q 043305 352 SQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAV 431 (892)
Q Consensus 352 ~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv 431 (892)
...++++.+ +.... ..+.||++.||++++++.|.+... +| +. .
T Consensus 275 -~~~~~~l~~---a~~~e--------------~~~~hp~~~Ai~~~~~~~~~~~~~-----------~~--~~------~ 317 (556)
T TIGR01525 275 -ISEEELLAL---AAALE--------------QSSSHPLARAIVRYAKKRGLELPK-----------QE--DV------E 317 (556)
T ss_pred -ccHHHHHHH---HHHHh--------------ccCCChHHHHHHHHHHhcCCCccc-----------cc--Ce------e
Confidence 001222221 11110 124699999999999987754221 12 00 0
Q ss_pred ecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhcc
Q 043305 432 QLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWA 511 (892)
Q Consensus 432 ~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~ 511 (892)
..++.++..++||+++..+..|+.. ..++. ....+++.+++++.+|+|++.++.
T Consensus 318 ~~~~~gi~~~~~g~~~~~lg~~~~~-~~~~~-------~~~~~~~~~~~~~~~g~~~~~v~~------------------ 371 (556)
T TIGR01525 318 EVPGKGVEATVDGQEEVRIGNPRLL-ELAAE-------PISASPDLLNEGESQGKTVVFVAV------------------ 371 (556)
T ss_pred EecCCeEEEEECCeeEEEEecHHHH-hhcCC-------CchhhHHHHHHHhhCCcEEEEEEE------------------
Confidence 1134467788899999999999743 11111 112234556778899999999984
Q ss_pred CCCCCcEEEEEEEecCCCchhHHHHHHHHHhCC-CEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCH
Q 043305 512 LPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAG-VKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSE 590 (892)
Q Consensus 512 ~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AG-I~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~ 590 (892)
|.+++|.+.++|++|||++++++.|+++| +++.|+|||+..++.++++++||.
T Consensus 372 ----~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~---------------------- 425 (556)
T TIGR01525 372 ----DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID---------------------- 425 (556)
T ss_pred ----CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC----------------------
Confidence 34799999999999999999999999999 999999999999999999999994
Q ss_pred HHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCC
Q 043305 591 TQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDD 670 (892)
Q Consensus 591 ~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~dd 670 (892)
.+|++..|++|..+++.+++.++.|+|+|||.||+||+++||||++|| .+++.+++.||+++.+|
T Consensus 426 --------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~ 490 (556)
T TIGR01525 426 --------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLND 490 (556)
T ss_pred --------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCC
Confidence 367888999999999999999999999999999999999999999999 89999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 671 NFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAA 711 (892)
Q Consensus 671 nf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~ 711 (892)
+++.|.+++++||+++.||++++.|.+++|++++.+.+.+.
T Consensus 491 ~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 491 DLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999987766543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-48 Score=447.52 Aligned_cols=340 Identities=27% Similarity=0.358 Sum_probs=274.2
Q ss_pred hhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeC
Q 043305 262 DGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVG 341 (892)
Q Consensus 262 ~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~ 341 (892)
..+...|..+++++|+||||+|.||++++...|...-+++|+|+|..+++|++.++++|.||||||||+|+++|+++...
T Consensus 527 ~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~ 606 (951)
T KOG0207|consen 527 DAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSL 606 (951)
T ss_pred HHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEec
Confidence 35778899999999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred CcccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccc
Q 043305 342 GRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFN 421 (892)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~ 421 (892)
+.. ++......+..+.-. -+.||...|+++||++..... ....+.....|.
T Consensus 607 ~~~---------~~~~e~l~~v~a~Es----------------~SeHPig~AIv~yak~~~~~~----~~~~~~~~~~~p 657 (951)
T KOG0207|consen 607 SNP---------ISLKEALALVAAMES----------------GSEHPIGKAIVDYAKEKLVEP----NPEGVLSFEYFP 657 (951)
T ss_pred CCc---------ccHHHHHHHHHHHhc----------------CCcCchHHHHHHHHHhccccc----Cccccceeeccc
Confidence 432 222111112122211 146999999999999765110 111112222222
Q ss_pred cCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCC
Q 043305 422 SLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERI 501 (892)
Q Consensus 422 S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~ 501 (892)
.+.+...+.+ .| -|+.+. ...++..+|...+ +.+++.+++-...|..+.++|+
T Consensus 658 g~g~~~~~~~-----------~~-~~i~iG-N~~~~~r~~~~~~------~~i~~~~~~~e~~g~tvv~v~v-------- 710 (951)
T KOG0207|consen 658 GEGIYVTVTV-----------DG-NEVLIG-NKEWMSRNGCSIP------DDILDALTESERKGQTVVYVAV-------- 710 (951)
T ss_pred CCCcccceEE-----------ee-eEEeec-hHHHHHhcCCCCc------hhHHHhhhhHhhcCceEEEEEE--------
Confidence 2221211111 11 112222 2234444554332 2367777788889999999985
Q ss_pred CchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceec
Q 043305 502 PDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIE 581 (892)
Q Consensus 502 ~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~ 581 (892)
|-+++|+++++|++|||+..+|+.||+.||++.|+||||..||+++|+++||.
T Consensus 711 --------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------- 763 (951)
T KOG0207|consen 711 --------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------- 763 (951)
T ss_pred --------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc-------------
Confidence 44799999999999999999999999999999999999999999999999964
Q ss_pred chhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhh
Q 043305 582 GKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE 661 (892)
Q Consensus 582 G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAke 661 (892)
.|+|...|+||.+.|+.+|++|..|||+|||+||+|||.+|||||+|| .|+++|.|
T Consensus 764 -----------------------~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAie 819 (951)
T KOG0207|consen 764 -----------------------NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIE 819 (951)
T ss_pred -----------------------eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHh
Confidence 599999999999999999999999999999999999999999999999 88999999
Q ss_pred cccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 662 SSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINF 708 (892)
Q Consensus 662 aaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~ 708 (892)
+|||+|+.+|+..++.++..+|+...+||.++.|.+++|++++.+..
T Consensus 820 aADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAa 866 (951)
T KOG0207|consen 820 AADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAA 866 (951)
T ss_pred hCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhe
Confidence 99999999999999999999999999999999999999999877654
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-46 Score=439.43 Aligned_cols=323 Identities=31% Similarity=0.444 Sum_probs=262.0
Q ss_pred HHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCccc
Q 043305 266 KILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKM 345 (892)
Q Consensus 266 ~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~ 345 (892)
..+..++++++++|||+|+++++++++.++.+++++|+++|+.+++|+|+++++||||||||||+|+|+|+++...+..
T Consensus 226 ~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~- 304 (562)
T TIGR01511 226 FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR- 304 (562)
T ss_pred HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC-
Confidence 3678899999999999999999999999999999999999999999999999999999999999999999998753210
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCc
Q 043305 346 NPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKK 425 (892)
Q Consensus 346 ~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK 425 (892)
..++++.+ +.+.. ..+.||.+.|+++++.+.+.+... ..+|..
T Consensus 305 --------~~~~~l~~---aa~~e--------------~~s~HPia~Ai~~~~~~~~~~~~~---------~~~~~~--- 347 (562)
T TIGR01511 305 --------DRTELLAL---AAALE--------------AGSEHPLAKAIVSYAKEKGITLVE---------VSDFKA--- 347 (562)
T ss_pred --------CHHHHHHH---HHHHh--------------ccCCChHHHHHHHHHHhcCCCcCC---------CCCeEE---
Confidence 01222222 11111 113599999999999877653211 011111
Q ss_pred eeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchh
Q 043305 426 RGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEE 505 (892)
Q Consensus 426 ~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~ 505 (892)
.++.++...++| .+..+..|+.. ..+|. .++ ++.++|.+++.++.
T Consensus 348 -------~~g~Gi~~~~~g-~~~~iG~~~~~-~~~~~--~~~------------~~~~~g~~~~~~~~------------ 392 (562)
T TIGR01511 348 -------IPGIGVEGTVEG-TKIQLGNEKLL-GENAI--KID------------GKAEQGSTSVLVAV------------ 392 (562)
T ss_pred -------ECCceEEEEECC-EEEEEECHHHH-HhCCC--CCC------------hhhhCCCEEEEEEE------------
Confidence 123334445555 44555555432 22221 111 23467888887762
Q ss_pred hhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhh
Q 043305 506 ELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSF 585 (892)
Q Consensus 506 ~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~ 585 (892)
|.+++|+++++|++|||++++|++|++.|+++.|+|||+..++.++|+++||.
T Consensus 393 ----------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~----------------- 445 (562)
T TIGR01511 393 ----------NGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN----------------- 445 (562)
T ss_pred ----------CCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----------------
Confidence 56899999999999999999999999999999999999999999999999982
Q ss_pred hhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccE
Q 043305 586 RALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDI 665 (892)
Q Consensus 586 ~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDi 665 (892)
++++..|++|.++++.++++++.|+|+|||.||+||+++|||||+|| .|++.++++||+
T Consensus 446 --------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Adv 504 (562)
T TIGR01511 446 --------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADV 504 (562)
T ss_pred --------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCE
Confidence 46677899999999999999999999999999999999999999999 899999999999
Q ss_pred EEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 666 IILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFV 709 (892)
Q Consensus 666 il~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~ 709 (892)
++++|+++.|.+++++||.++.+|++++.|.+++|++.+.+.+.
T Consensus 505 vl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~ 548 (562)
T TIGR01511 505 VLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAG 548 (562)
T ss_pred EEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999988776653
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=455.05 Aligned_cols=330 Identities=29% Similarity=0.376 Sum_probs=270.6
Q ss_pred HHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCc
Q 043305 264 AIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR 343 (892)
Q Consensus 264 ~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~ 343 (892)
+...+..+++++|++|||+|+++++++++.++.+|+|+|+|||+++++|++|+++++|||||||||+|+|+|.+++..+.
T Consensus 464 ~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~ 543 (834)
T PRK10671 464 IVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG 543 (834)
T ss_pred HHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC
Confidence 55678889999999999999999999999999999999999999999999999999999999999999999998864321
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccC
Q 043305 344 KMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSL 423 (892)
Q Consensus 344 ~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~ 423 (892)
+++. +++..+.+.++ .+.||.+.||++++...... ....|...
T Consensus 544 ----------~~~~--~~l~~a~~~e~--------------~s~hp~a~Ai~~~~~~~~~~-----------~~~~~~~~ 586 (834)
T PRK10671 544 ----------VDEA--QALRLAAALEQ--------------GSSHPLARAILDKAGDMTLP-----------QVNGFRTL 586 (834)
T ss_pred ----------CCHH--HHHHHHHHHhC--------------CCCCHHHHHHHHHHhhCCCC-----------CcccceEe
Confidence 1111 22222222221 14699999999988643211 11233332
Q ss_pred CceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCc
Q 043305 424 KKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPD 503 (892)
Q Consensus 424 rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~ 503 (892)
..+ ++-... +|. .+++|+++.+.+. + ++ ++.+.+.+++++++|.+++.+|+
T Consensus 587 ~g~-Gv~~~~-~g~--~~~~G~~~~~~~~--------~----~~---~~~~~~~~~~~~~~g~~~v~va~---------- 637 (834)
T PRK10671 587 RGL-GVSGEA-EGH--ALLLGNQALLNEQ--------Q----VD---TKALEAEITAQASQGATPVLLAV---------- 637 (834)
T ss_pred cce-EEEEEE-CCE--EEEEeCHHHHHHc--------C----CC---hHHHHHHHHHHHhCCCeEEEEEE----------
Confidence 222 222111 232 2456888754321 1 11 23456677888999999999985
Q ss_pred hhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecch
Q 043305 504 EEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGK 583 (892)
Q Consensus 504 ~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~ 583 (892)
|..++|++++.|++||+++++|++|++.|+++.|+|||+..+|.++|+++||.
T Consensus 638 ------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~--------------- 690 (834)
T PRK10671 638 ------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID--------------- 690 (834)
T ss_pred ------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC---------------
Confidence 23689999999999999999999999999999999999999999999999995
Q ss_pred hhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcc
Q 043305 584 SFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESS 663 (892)
Q Consensus 584 ~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaa 663 (892)
.++++..|++|.++++.++.+++.|+|+|||.||+|||++||+||+|| +|++.++++|
T Consensus 691 ---------------------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~a 748 (834)
T PRK10671 691 ---------------------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETA 748 (834)
T ss_pred ---------------------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhC
Confidence 377889999999999999999999999999999999999999999999 8999999999
Q ss_pred cEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 664 DIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINF 708 (892)
Q Consensus 664 Diil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~ 708 (892)
|+++++|++..|.+++++||.++.||++++.|.+.+|++++.+.+
T Consensus 749 d~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 749 AITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred CEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998877654
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=435.20 Aligned_cols=311 Identities=29% Similarity=0.405 Sum_probs=254.5
Q ss_pred HHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccC
Q 043305 267 ILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMN 346 (892)
Q Consensus 267 ~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~ 346 (892)
.+..++++++++|||+||++++++++.++++|+|+|+++|+++++|++|+++++|||||||||+|+|+|.+++..
T Consensus 196 ~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~----- 270 (536)
T TIGR01512 196 WVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA----- 270 (536)
T ss_pred HHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-----
Confidence 677899999999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCce
Q 043305 347 PTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKR 426 (892)
Q Consensus 347 ~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~ 426 (892)
+++..+.+.. ..+.||.+.||++++.+.+ ||++.+..
T Consensus 271 -------------~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~----------------~~~~~~~~ 307 (536)
T TIGR01512 271 -------------EVLRLAAAAE--------------QASSHPLARAIVDYARKRE----------------NVESVEEV 307 (536)
T ss_pred -------------HHHHHHHHHh--------------ccCCCcHHHHHHHHHHhcC----------------CCcceEEe
Confidence 2222222211 1246999999999987653 22222111
Q ss_pred e--EEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCch
Q 043305 427 G--GVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDE 504 (892)
Q Consensus 427 m--svvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~ 504 (892)
. ++....++..+ ..|+++.+ ..++ ...+..+|.+++.++
T Consensus 308 ~g~gi~~~~~g~~~---~ig~~~~~--------~~~~----------------~~~~~~~~~~~~~v~------------ 348 (536)
T TIGR01512 308 PGEGVRAVVDGGEV---RIGNPRSL--------EAAV----------------GARPESAGKTIVHVA------------ 348 (536)
T ss_pred cCCeEEEEECCeEE---EEcCHHHH--------hhcC----------------CcchhhCCCeEEEEE------------
Confidence 1 11111111111 12443211 1111 114556777776665
Q ss_pred hhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCC-EEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecch
Q 043305 505 EELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGV-KVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGK 583 (892)
Q Consensus 505 ~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI-~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~ 583 (892)
.|..++|.+.++|++|||++++|+.|+++|+ ++.|+|||+..+|.++++++||.
T Consensus 349 ----------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------- 403 (536)
T TIGR01512 349 ----------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--------------- 403 (536)
T ss_pred ----------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------
Confidence 2468999999999999999999999999999 99999999999999999999995
Q ss_pred hhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcc
Q 043305 584 SFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESS 663 (892)
Q Consensus 584 ~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaa 663 (892)
.+|++..|++|..+++.++++++.|+|+|||.||+||+++||+|++||.+|++.++++|
T Consensus 404 ---------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~a 462 (536)
T TIGR01512 404 ---------------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETA 462 (536)
T ss_pred ---------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhC
Confidence 25678889999999999999999999999999999999999999999977899999999
Q ss_pred cEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 664 DIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVA 710 (892)
Q Consensus 664 Diil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~ 710 (892)
|+++.+|+++.+.+++++||.++.||++++.|++.+|++++.+.+++
T Consensus 463 d~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 463 DVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFG 509 (536)
T ss_pred CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999988887754
|
. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=351.90 Aligned_cols=319 Identities=28% Similarity=0.402 Sum_probs=255.9
Q ss_pred HHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCC
Q 043305 269 TVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPT 348 (892)
Q Consensus 269 ~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~ 348 (892)
..-++++|+.+|-....-++-.=..+|.|+.+-|++.++..|+|..|.++++..|||||+|-|.=...+++....
T Consensus 251 ~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~g----- 325 (681)
T COG2216 251 TVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPG----- 325 (681)
T ss_pred HHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCC-----
Confidence 445778899999887666665556699999999999999999999999999999999999988765555553221
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeE
Q 043305 349 DSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGG 428 (892)
Q Consensus 349 ~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~ms 428 (892)
.+++ + +..+....+ + .+ ..|.-+.+++++++++.+.+...... -....||+.+.++++
T Consensus 326 -----v~~~--~-la~aa~lsS---l-~D---------eTpEGrSIV~LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSG 383 (681)
T COG2216 326 -----VSEE--E-LADAAQLAS---L-AD---------ETPEGRSIVELAKKLGIELREDDLQS-HAEFVPFTAQTRMSG 383 (681)
T ss_pred -----CCHH--H-HHHHHHHhh---h-cc---------CCCCcccHHHHHHHhccCCCcccccc-cceeeecceeccccc
Confidence 1111 1 222222221 1 11 24566789999999886544322111 346789999988877
Q ss_pred EEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhh
Q 043305 429 VAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELS 508 (892)
Q Consensus 429 vvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~ 508 (892)
+-.. ++ +-.-|||.+.+.+..+. .|.. ..+.++...++.++.|-..|+++.
T Consensus 384 vd~~--~~--~~irKGA~dai~~~v~~----~~g~------~p~~l~~~~~~vs~~GGTPL~V~~--------------- 434 (681)
T COG2216 384 VDLP--GG--REIRKGAVDAIRRYVRE----RGGH------IPEDLDAAVDEVSRLGGTPLVVVE--------------- 434 (681)
T ss_pred ccCC--CC--ceeecccHHHHHHHHHh----cCCC------CCHHHHHHHHHHHhcCCCceEEEE---------------
Confidence 7543 33 45679999998776542 2211 134577888899999999998872
Q ss_pred hccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhc
Q 043305 509 RWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRAL 588 (892)
Q Consensus 509 ~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l 588 (892)
|-.++|++.++|-++||.+|-+.++|+.||+.+|+||||+.||.+||+|.|+.
T Consensus 435 -------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD-------------------- 487 (681)
T COG2216 435 -------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD-------------------- 487 (681)
T ss_pred -------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch--------------------
Confidence 44799999999999999999999999999999999999999999999999986
Q ss_pred CHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEc
Q 043305 589 SETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIIL 668 (892)
Q Consensus 589 ~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ 668 (892)
...|.++||||..+++.-|.+|+.|||||||+||||||.+||||+||. +||.+|||++.+|=+
T Consensus 488 ----------------dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDL 550 (681)
T COG2216 488 ----------------DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDL 550 (681)
T ss_pred ----------------hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhccccc
Confidence 256899999999999999999999999999999999999999999998 999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHH
Q 043305 669 DDNFASVVKVVRWGRSVYA 687 (892)
Q Consensus 669 ddnf~sIv~~i~~GR~v~~ 687 (892)
|.|-..+.+.+.-|+...-
T Consensus 551 DS~PTKlievV~IGKqlLi 569 (681)
T COG2216 551 DSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred CCCccceehHhhhhhhhee
Confidence 9999999999999998654
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=236.58 Aligned_cols=175 Identities=32% Similarity=0.593 Sum_probs=142.9
Q ss_pred CCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCC
Q 043305 716 DVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLES 795 (892)
Q Consensus 716 ~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~~ 795 (892)
|.|++++|+||+|+++|++|+++|+.|||++++|+|||++++++++++.+|++++.++++++++.+..++.+.+.++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999888887776554432
Q ss_pred CCcccccccchhHHHHHHHHHHHhhhhcccCCCCcccc--cCCcchHHHHHHHHHHHHHHHHHHHH--hhhccccccCCh
Q 043305 796 DSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIF--GGITKNRLFMGIVAVTLVLQILIIQF--LGKFASTTRLNW 871 (892)
Q Consensus 796 ~~~~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f--~~~~~N~~f~~~i~~~~~~qi~~v~~--~~~~f~~~~L~~ 871 (892)
.........++|+.|++++++|++|.+++|+.++ ++| ++.++|++++.++++++++|+++++. ++.+|++.|+++
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~-~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~ 159 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRR-SVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPL 159 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSS-TCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----TH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccccc-cceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCH
Confidence 1111123468999999999999999999999653 344 58889999999999999999888754 899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 043305 872 KHWIISVVIGFIRLFEHPVL 891 (892)
Q Consensus 872 ~~w~~~i~~~~~~l~~~eiv 891 (892)
.+|+++++++++.+++.|++
T Consensus 160 ~~w~~~l~~~~~~~~~~ei~ 179 (182)
T PF00689_consen 160 WQWLICLALALLPFIVDEIR 179 (182)
T ss_dssp HHHHCHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999874
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-25 Score=229.12 Aligned_cols=97 Identities=43% Similarity=0.700 Sum_probs=92.7
Q ss_pred CcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHH
Q 043305 516 DLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREE 595 (892)
Q Consensus 516 ~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~ 595 (892)
+++++|.+.+.||+||+++++|+.|+++||+++|+|||+..+|.++|+++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 67899999999999999999999999999999999999999999999999994
Q ss_pred HhcccccceEEEecc--CHhhH--HHHHHHHHHcCCeEEEeCCCCCChHhhhcCC
Q 043305 596 IAGEDFGMICVMGRS--SPSDK--LLLVQALRKRGDVVAVTGDGTNDAPALHEAD 646 (892)
Q Consensus 596 i~~~~~~~~~V~aR~--sP~dK--~~lV~~Lq~~g~vVa~tGDG~NDapALk~Ad 646 (892)
+..|++++ +|++| .++++.||.+++.|+|+|||.||++|+++||
T Consensus 168 -------~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 168 -------DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -------SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -------cccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 56799999 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.2e-17 Score=185.86 Aligned_cols=307 Identities=13% Similarity=0.200 Sum_probs=221.5
Q ss_pred CceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccC-------------CCCc-------
Q 043305 444 GAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERE-------------RIPD------- 503 (892)
Q Consensus 444 GA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~-------------~~~~------- 503 (892)
|-.+.+++.|+.++|. ..+.||+..+|+++++...+-.-.| .|+|+|||+.... ..|.
T Consensus 698 g~ad~~~eACTdfWdG-adi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDG-ADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCC-ceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 5667788999999975 3578999999999998887766666 5999999974210 0000
Q ss_pred --------------hhh------------hhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHH
Q 043305 504 --------------EEE------------LSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQT 557 (892)
Q Consensus 504 --------------~~~------------~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~T 557 (892)
+.. .+..+..-.+.+|.|+|..+...|++....|+.+-+|.|+.+..+-.+...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 000 000112335778999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcCCC---------------------------------------CCCceec-------chhhhhcCHH
Q 043305 558 ARAIALECGILTSEADA---------------------------------------TEPNIIE-------GKSFRALSET 591 (892)
Q Consensus 558 A~aIA~~~GI~~~~~~~---------------------------------------~~~~vi~-------G~~~~~l~~~ 591 (892)
.+-.|.++||...++.. .++...+ -..|+.++..
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999998765510 0000000 0111111100
Q ss_pred -------HHHHHhccccc--------------ceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCC--ChHhhhcCCee
Q 043305 592 -------QREEIAGEDFG--------------MICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTN--DAPALHEADIG 648 (892)
Q Consensus 592 -------e~~~i~~~~~~--------------~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~N--DapALk~AdVG 648 (892)
--...++...+ -+..|..|+|+.-.+|++.+|++|+|+++.|...| ..-.+-+|||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 00011111111 23579999999999999999999999999999988 44466889999
Q ss_pred EeecCC------------CcHh--h----------------hhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 649 LAMGIQ------------GTEV--A----------------KESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLT 698 (892)
Q Consensus 649 IAmgi~------------gt~v--A----------------keaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt 698 (892)
||+..- ++.. | .-++|+-+.....-+|.++|..+|.....+|+.+.|.|.
T Consensus 1016 ialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq 1095 (1354)
T KOG4383|consen 1016 IALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQ 1095 (1354)
T ss_pred EEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 997321 1111 1 113344444444567889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhh-cccCCCCccccccC
Q 043305 699 VNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALA-LATEPPTDHLMQRS 752 (892)
Q Consensus 699 ~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~ala-La~e~p~~~lm~r~ 752 (892)
..+...++.|++.++..+..++..|++|...+--++..+. |-+.+|.+.+|-+.
T Consensus 1096 ~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~ma 1150 (1354)
T KOG4383|consen 1096 AQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMA 1150 (1354)
T ss_pred HHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEee
Confidence 9999999999999999999999999999999876666555 55677777776553
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.5e-16 Score=141.70 Aligned_cols=73 Identities=38% Similarity=0.682 Sum_probs=65.1
Q ss_pred ccccCChHHHHHHHHHHHc--CCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeecccccc
Q 043305 383 AEVSGSPTEKAILQWGMKL--GMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGY 456 (892)
Q Consensus 383 ~~~~g~ptE~ALl~~a~~~--g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~ 456 (892)
.+..|+|||.||+.|+.++ +.+....+..+++++++||||+||||+|+++ .++.+.+|+|||||.||++|+++
T Consensus 17 ~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 17 EEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred ccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCCC
Confidence 3489999999999999999 4567889999999999999999999999998 34457779999999999999864
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.3e-14 Score=120.34 Aligned_cols=67 Identities=28% Similarity=0.576 Sum_probs=64.6
Q ss_pred cccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 150 SLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAAS 218 (892)
Q Consensus 150 ~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvS 218 (892)
+++++++++.|+||..+||+.+ |+++|+++||+|++++++++++|+.++++|.|+++++|++||++|
T Consensus 3 ~~~~~~v~~~l~t~~~~GLs~~--ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 3 QLSVEEVLKRLNTSSSQGLSSE--EVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TSSHHHHHHHHTTBTSSBBTHH--HHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCcCCCCCCCHH--HHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 4679999999999999999987 999999999999999999999999999999999999999999997
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.2e-13 Score=125.77 Aligned_cols=125 Identities=24% Similarity=0.338 Sum_probs=106.5
Q ss_pred EEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHh
Q 043305 518 VLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIA 597 (892)
Q Consensus 518 ~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~ 597 (892)
...+.+.---.+=++|++.|++|++. ++|.+.|||..-+-...|+-.||.
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~----------------------------- 69 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP----------------------------- 69 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc-----------------------------
Confidence 45566666667889999999999999 999999999999999999999986
Q ss_pred cccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCC--CcHhhhhcccEEEcCCCchHH
Q 043305 598 GEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQ--GTEVAKESSDIIILDDNFASV 675 (892)
Q Consensus 598 ~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~--gt~vAkeaaDiil~ddnf~sI 675 (892)
.-+|||-..|+.|.++++.|+++++.|.|+|||.||.+||++||+||..=.+ ..+-+.++||+++.+ ...+
T Consensus 70 -----~~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ 142 (152)
T COG4087 70 -----VERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEI 142 (152)
T ss_pred -----eeeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHH
Confidence 3479999999999999999999999999999999999999999999876322 234467899999876 5555
Q ss_pred HHHH
Q 043305 676 VKVV 679 (892)
Q Consensus 676 v~~i 679 (892)
++++
T Consensus 143 ldl~ 146 (152)
T COG4087 143 LDLL 146 (152)
T ss_pred HHHh
Confidence 5543
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.4e-13 Score=112.28 Aligned_cols=62 Identities=31% Similarity=0.485 Sum_probs=59.2
Q ss_pred HhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 043305 159 MLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALG 222 (892)
Q Consensus 159 ~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg 222 (892)
.|+||++.||+++ ++++|+++||+|++++++++++|+++|++|.|+++++|++||++|+++|
T Consensus 2 ~l~~~~~~GLs~~--~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSE--EAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHH--HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 4789999999988 8999999999999999999999999999999999999999999999887
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases [] | Back alignment and domain information |
|---|
Probab=99.36 E-value=3e-13 Score=103.85 Aligned_cols=45 Identities=58% Similarity=0.871 Sum_probs=41.6
Q ss_pred CCCCCccCCCCCCCchHHhHHHHHHh-hhhcccccccccccchhHHH
Q 043305 28 DDEGTFSIPRTKDAPIVRLKRWRQAA-LVLNASRRFRYTLDLKKEEE 73 (892)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 73 (892)
|+.++|+++ +||+|+|+++|||+|+ +|+|++|||||++||+|+++
T Consensus 1 yl~~~Fdi~-~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFDIP-AKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccCCC-CCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 568899999 4999999999999999 99999999999999998764
|
This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=9.2e-09 Score=111.66 Aligned_cols=66 Identities=26% Similarity=0.352 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+|..-++.|.+. | +.|+++|||.||.+||+.|++|+||| ++.+.+|+.||+|..+++=.++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 566666666654 3 57999999999999999999999999 999999999999998888888888875
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.90 E-value=5e-09 Score=109.95 Aligned_cols=148 Identities=24% Similarity=0.245 Sum_probs=102.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhh---hh-----c-----------
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSF---RA-----L----------- 588 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~---~~-----l----------- 588 (892)
.+.+++.++|++++++|+++.++||.+...++.+++++++..+-...+++.+....+- .. +
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998643222222222221100 00 0
Q ss_pred -------------------CHHHHHHHhcccccceEEE-----ec--cCHhhHHHHHHHHHHc----CCeEEEeCCCCCC
Q 043305 589 -------------------SETQREEIAGEDFGMICVM-----GR--SSPSDKLLLVQALRKR----GDVVAVTGDGTND 638 (892)
Q Consensus 589 -------------------~~~e~~~i~~~~~~~~~V~-----aR--~sP~dK~~lV~~Lq~~----g~vVa~tGDG~ND 638 (892)
..+++.+.+.+. .+.+. .. ....+|...++.+.+. .+.++++||+.||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND 175 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKER--GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSEND 175 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhC--CeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHH
Confidence 001111111110 11111 11 2245888888888764 3469999999999
Q ss_pred hHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHH
Q 043305 639 APALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 639 apALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~ 678 (892)
.+|++.|++|+||+ ++.+.+|+.||+|..+++-.+|.++
T Consensus 176 ~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 176 IDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 99999999999999 9999999999999987666666554
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.1e-08 Score=108.16 Aligned_cols=152 Identities=22% Similarity=0.173 Sum_probs=105.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceec---chhhhh--c--------------
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIE---GKSFRA--L-------------- 588 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~---G~~~~~--l-------------- 588 (892)
++.+.+.++|+++++.|+++.++||.....+..+++++|+..+-...+++.+.. ++.+.. +
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 378899999999999999999999999999999999999864322222222221 110000 0
Q ss_pred -------------------------CHHHHHHHhcccccceEE-----EeccCHh--hHHHHHHHHHHc----CCeEEEe
Q 043305 589 -------------------------SETQREEIAGEDFGMICV-----MGRSSPS--DKLLLVQALRKR----GDVVAVT 632 (892)
Q Consensus 589 -------------------------~~~e~~~i~~~~~~~~~V-----~aR~sP~--dK~~lV~~Lq~~----g~vVa~t 632 (892)
..++..+.+.+......+ +....|. +|..-++.+.+. .+.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 011122222110001111 1122232 477778777664 3569999
Q ss_pred CCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 633 GDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 633 GDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
||+.||.+|++.|++|+||| ++.+.+|+.||+|..+++=.++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999 999999999999998888888888775
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.5e-08 Score=106.77 Aligned_cols=152 Identities=23% Similarity=0.237 Sum_probs=102.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchh----hh-hc--------------
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKS----FR-AL-------------- 588 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~----~~-~l-------------- 588 (892)
.+.+.+.++|++++++||++.++||.+...+..+++++|+..+....+++.+..... +. .+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999653322112222211100 00 00
Q ss_pred ----------------------CHHHHHHHhcccccceEEE-----eccCH--hhHHHHHHHHHHc----CCeEEEeCCC
Q 043305 589 ----------------------SETQREEIAGEDFGMICVM-----GRSSP--SDKLLLVQALRKR----GDVVAVTGDG 635 (892)
Q Consensus 589 ----------------------~~~e~~~i~~~~~~~~~V~-----aR~sP--~dK~~lV~~Lq~~----g~vVa~tGDG 635 (892)
..++..++.........+. ....| .+|..-++.+.++ .+.|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0111111111100011111 11122 4788888888664 3579999999
Q ss_pred CCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchH----HHHHHH
Q 043305 636 TNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFAS----VVKVVR 680 (892)
Q Consensus 636 ~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~s----Iv~~i~ 680 (892)
.||.+|++.|++|+||| ++.+.+|+.||.|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 999999999999988777777 555553
|
catalyze the same reaction as SPP. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.8e-08 Score=109.25 Aligned_cols=66 Identities=29% Similarity=0.313 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhccc--EEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSD--IIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaD--iil~ddnf~sIv~~i~ 680 (892)
+|..-++.|.+. | +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .|..+++=.++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466667766553 2 56999999999999999999999999 99999999988 6777777778888774
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.3e-08 Score=110.79 Aligned_cols=152 Identities=14% Similarity=0.138 Sum_probs=101.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceec--chhhh--hcC--------------
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIE--GKSFR--ALS-------------- 589 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~--G~~~~--~l~-------------- 589 (892)
.+.+.++++|+++++.|+++.+.||.....+..+.+++|+..+-...+++.+.+ |+.+. .++
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588999999999999999999999999999999999999864311111111110 10000 000
Q ss_pred -----------------------------------------------------HHHHH---HHhccccc-ceEEE-----
Q 043305 590 -----------------------------------------------------ETQRE---EIAGEDFG-MICVM----- 607 (892)
Q Consensus 590 -----------------------------------------------------~~e~~---~i~~~~~~-~~~V~----- 607 (892)
++++. +.+.+.+. .+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 01111 11110000 11111
Q ss_pred -eccCH--hhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccE--EEcCCCchHHHHH
Q 043305 608 -GRSSP--SDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDI--IILDDNFASVVKV 678 (892)
Q Consensus 608 -aR~sP--~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDi--il~ddnf~sIv~~ 678 (892)
...+| -+|..-++.|.+. | +.|+++|||.||.+||+.|+.|+||| ++.+.+|++||. +..+++-.++.++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 11222 2588888877664 3 57999999999999999999999999 999999999996 6667777888877
Q ss_pred HH
Q 043305 679 VR 680 (892)
Q Consensus 679 i~ 680 (892)
|+
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 74
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.6e-08 Score=107.91 Aligned_cols=152 Identities=28% Similarity=0.321 Sum_probs=108.3
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchh------------------------
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKS------------------------ 584 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~------------------------ 584 (892)
+.+.++++|+++++.|++|.++||.....++.+.+++|+..+-...+++.+....+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 89999999999999999999999999999999999999985321111111111000
Q ss_pred ------------------------------------hhhc----------CH---HHHHHHhccccc-ceEEEeccCH--
Q 043305 585 ------------------------------------FRAL----------SE---TQREEIAGEDFG-MICVMGRSSP-- 612 (892)
Q Consensus 585 ------------------------------------~~~l----------~~---~e~~~i~~~~~~-~~~V~aR~sP-- 612 (892)
+... .. ++..+.+.+.+. ....+.++.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0000 01 111122221111 2233334333
Q ss_pred -------hhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 613 -------SDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 613 -------~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
.+|..-++.|.+. | +.|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++....+-.+|.+++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 3798888888774 4 35999999999999999999999999 8899999999988888899999998864
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.84 E-value=2e-08 Score=104.70 Aligned_cols=130 Identities=14% Similarity=0.063 Sum_probs=95.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecc-hhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEG-KSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G-~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..--. +.+.+++ ..+ + . ..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~a---n~l~~~~~g~~---t-------------G-~~ 126 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLC---HKLEIDDSDRV---V-------------G-YQ 126 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhc---eeeEEecCCee---E-------------C-ee
Confidence 57999999999999975 999999999999999999999963111 0011111 000 0 0 01
Q ss_pred EeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHH
Q 043305 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWG 682 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~G 682 (892)
. ..|++|...++.+++.|..+.++|||.||.||++.||+|+++. +.+..+++||=.-.-.+.+.+..++.+.
T Consensus 127 ~--~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 127 L--RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred e--cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 1 3577999999999988888999999999999999999999995 5665555554333333577777776553
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.6e-08 Score=110.87 Aligned_cols=130 Identities=22% Similarity=0.312 Sum_probs=98.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
|++|++.+.++.|+++|+++.++||.....+..+.+++|+...-. +.-.+.+|.- .-.+.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~a--n~lei~dg~l------------------tg~v~ 240 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVA--NELEIMDGKL------------------TGNVL 240 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEE--eEEEEECCEE------------------EeEec
Confidence 689999999999999999999999999888999999999853110 0000111100 00111
Q ss_pred ec-cCHhhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 608 GR-SSPSDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR-~sP~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
.. +....|...++.+.++ | +.+.++|||.||.+|++.|++|+|| ++.+..|+.||.++...++..+..++
T Consensus 241 g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 241 GDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred CccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 10 2236788888888764 3 6788999999999999999999999 78899999999999988888887655
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.6e-08 Score=104.56 Aligned_cols=129 Identities=19% Similarity=0.273 Sum_probs=95.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++|++++.++.|++.|+++.++||.+...+..+.+.+|+..--. .....++..+ ...+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~---~~~~~~~~~~-----------------~~~~~ 144 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFA---NRLEVEDGKL-----------------TGLVE 144 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEe---eEEEEECCEE-----------------EEEec
Confidence 689999999999999999999999999999999999999863110 0000000000 00111
Q ss_pred ec-cCHhhHHHHHHHHHHcC----CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHH
Q 043305 608 GR-SSPSDKLLLVQALRKRG----DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 608 aR-~sP~dK~~lV~~Lq~~g----~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~ 678 (892)
++ ..+..|..+++.+.++. +.+.++||+.||.+|++.|+++++++ +.+..+++||.+|.++||..+..+
T Consensus 145 ~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 145 GPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 11 12234666777665542 35888999999999999999999885 778899999999999999888754
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.9e-08 Score=105.26 Aligned_cols=66 Identities=27% Similarity=0.410 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+|...++.+.++ | +.|+++||+.||.+|++.|++|+||| ++.+..|+.||++..+++-.++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466666666543 3 56999999999999999999999999 888889999999998888888888875
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.8e-08 Score=104.24 Aligned_cols=151 Identities=23% Similarity=0.255 Sum_probs=103.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCce-e-cchhhh--hc---------------
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNI-I-EGKSFR--AL--------------- 588 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~v-i-~G~~~~--~l--------------- 588 (892)
.+.+++.+++++++++|+++.+.||.....++.+..++++..+....+++.+ . +|+.+. .+
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 94 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKEH 94 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHHT
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhhc
Confidence 4679999999999999999999999999999999999998732211111111 0 000000 00
Q ss_pred ------------------------------------------------------CHHHHHHH---hcccccceEEEecc-
Q 043305 589 ------------------------------------------------------SETQREEI---AGEDFGMICVMGRS- 610 (892)
Q Consensus 589 ------------------------------------------------------~~~e~~~i---~~~~~~~~~V~aR~- 610 (892)
+.+++..+ +.+.+.....+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 174 (254)
T PF08282_consen 95 NISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSS 174 (254)
T ss_dssp TCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred ccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEec
Confidence 01111111 11111111122222
Q ss_pred --------CHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHH
Q 043305 611 --------SPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 611 --------sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~ 678 (892)
...+|..-++.|.+. .+.++++||+.||.+||+.|+.|+||| ++++..|..||.+....|=.+|.++
T Consensus 175 ~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 175 PYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp TTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred ccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHHh
Confidence 235799888888763 368999999999999999999999999 9999999999999988777888776
Q ss_pred H
Q 043305 679 V 679 (892)
Q Consensus 679 i 679 (892)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.1e-07 Score=113.18 Aligned_cols=66 Identities=30% Similarity=0.437 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+|..-++.|.+. | +.|+++|||.||.+||+.|++||||| ++.+.+|+.||+|..+++=.+|.++|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 344444444443 2 46899999999999999999999999 999999999999998888888888875
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.7e-08 Score=97.31 Aligned_cols=102 Identities=17% Similarity=0.247 Sum_probs=81.6
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhh
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSD 614 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~d 614 (892)
.+|+.|+++|+++.++|+.+...+..+.+.+|+..-. .+ ..-.|+-
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f---------~~-------------------------~kpkp~~ 86 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFH---------EG-------------------------IKKKTEP 86 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEE---------ec-------------------------CCCCHHH
Confidence 6899999999999999999999999999999996210 00 0123444
Q ss_pred HHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC
Q 043305 615 KLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN 671 (892)
Q Consensus 615 K~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn 671 (892)
-..+++.+.-..+.++++||+.||.+|++.|++++||+ ++.+.+|+.|++|..+++
T Consensus 87 ~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 87 YAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCC
Confidence 44445544433467999999999999999999999999 899999999999986544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.64 E-value=3e-07 Score=99.29 Aligned_cols=151 Identities=15% Similarity=0.094 Sum_probs=97.4
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchh--------h--hhcCHHHHHHHhc
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKS--------F--RALSETQREEIAG 598 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~--------~--~~l~~~e~~~i~~ 598 (892)
..+.+.++|++++++|+++.++||.....+..+.+++|+..+....+++.+..... + ..++.+...+++.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 34468999999999999999999999999999999999864322223333332110 0 0011111100000
Q ss_pred -------------------------------------cccc--------------------ceEEEe-----cc--CHhh
Q 043305 599 -------------------------------------EDFG--------------------MICVMG-----RS--SPSD 614 (892)
Q Consensus 599 -------------------------------------~~~~--------------------~~~V~a-----R~--sP~d 614 (892)
.... .+.+.. .. .-.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0000 011100 00 1235
Q ss_pred HHHHHHHHHHc------CCeEEEeCCCCCChHhhhcCCeeEeecCCCc---Hhhhhc--c-cEEEcCCCchHHHHHHH
Q 043305 615 KLLLVQALRKR------GDVVAVTGDGTNDAPALHEADIGLAMGIQGT---EVAKES--S-DIIILDDNFASVVKVVR 680 (892)
Q Consensus 615 K~~lV~~Lq~~------g~vVa~tGDG~NDapALk~AdVGIAmgi~gt---~vAkea--a-Diil~ddnf~sIv~~i~ 680 (892)
|..-++.+.+. .+.|.++||+.||.+||+.|++|+||| ++. +..|+. | ++|..+++-.++.++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 66666666543 456999999999999999999999999 776 467886 4 58877778888888775
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.9e-07 Score=93.14 Aligned_cols=97 Identities=21% Similarity=0.312 Sum_probs=77.7
Q ss_pred HHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhH
Q 043305 536 AIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDK 615 (892)
Q Consensus 536 aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK 615 (892)
+|+.|++.|+++.++||+....+..+.+..|+... +++ . ..|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~---------~~~---------------------------~--~~k 77 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL---------YQG---------------------------Q--SNK 77 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------Eec---------------------------c--cch
Confidence 99999999999999999999999999999998621 111 0 123
Q ss_pred HHHHHHHHH----cCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC
Q 043305 616 LLLVQALRK----RGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN 671 (892)
Q Consensus 616 ~~lV~~Lq~----~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn 671 (892)
...++.+.+ ..+.+.++||+.||.+|++.|+++++|. .+.+..+..||+++..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 78 LIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 444444332 3467999999999999999999999998 778889999999997553
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.56 E-value=7.1e-07 Score=97.24 Aligned_cols=152 Identities=13% Similarity=0.040 Sum_probs=95.7
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCC-CcCCCCCCceecchh--------h--hhcCHHHHHHHh
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILT-SEADATEPNIIEGKS--------F--RALSETQREEIA 597 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~-~~~~~~~~~vi~G~~--------~--~~l~~~e~~~i~ 597 (892)
+-+.++++|++++++||++++.||.....+..+++++|+.. +-...+++.+..... . ..++.+...+++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45779999999999999999999999999999999999842 222223333332110 0 001111111110
Q ss_pred cc----------------------------------ccc--ceEEEe----------------------------ccCH-
Q 043305 598 GE----------------------------------DFG--MICVMG----------------------------RSSP- 612 (892)
Q Consensus 598 ~~----------------------------------~~~--~~~V~a----------------------------R~sP- 612 (892)
.. ... ...+.. ...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 00 000 000111 1112
Q ss_pred -hhHHHHHHHHHH-------cCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHh-----hhhcccEEEcCCCchHHHHHH
Q 043305 613 -SDKLLLVQALRK-------RGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV-----AKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 613 -~dK~~lV~~Lq~-------~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~v-----AkeaaDiil~ddnf~sIv~~i 679 (892)
-+|..-++.|.+ ..+.|+++|||.||.+||+.|++|+|||....+. .+..+|++.....-.++.+++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 356666666654 2357999999999999999999999999333221 455789988887777888877
Q ss_pred H
Q 043305 680 R 680 (892)
Q Consensus 680 ~ 680 (892)
+
T Consensus 265 ~ 265 (271)
T PRK03669 265 D 265 (271)
T ss_pred H
Confidence 5
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.2e-07 Score=98.95 Aligned_cols=65 Identities=31% Similarity=0.324 Sum_probs=55.9
Q ss_pred hhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHH
Q 043305 613 SDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 613 ~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~ 678 (892)
.+|..-++.+.+. .+.++++||+.||.+|++.|++|+||| ++.+.+|+.||+++.+++-.+|.++
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 3688888888764 357999999999999999999999999 8899999999999988777776654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.3e-06 Score=93.29 Aligned_cols=152 Identities=18% Similarity=0.129 Sum_probs=97.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchh----------------hh--hcC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKS----------------FR--ALS 589 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~----------------~~--~l~ 589 (892)
.+.+++.++|++|++.|+++.++||.....+..+++++|+..+....+++.+...+. +. .++
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGPP 100 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCCC
Confidence 467889999999999999999999999999999999999864332223333322100 00 011
Q ss_pred HHHHHHHh-------------------------------------cccccc----------------------eEEE---
Q 043305 590 ETQREEIA-------------------------------------GEDFGM----------------------ICVM--- 607 (892)
Q Consensus 590 ~~e~~~i~-------------------------------------~~~~~~----------------------~~V~--- 607 (892)
.+...+++ ...... +.+.
T Consensus 101 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 180 (273)
T PRK00192 101 YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRGG 180 (273)
T ss_pred HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEECC
Confidence 11000000 000000 0000
Q ss_pred --ecc-CHhhHHHHHHHHHHc----C-CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhh----hcc-cEEE--cCCCc
Q 043305 608 --GRS-SPSDKLLLVQALRKR----G-DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAK----ESS-DIII--LDDNF 672 (892)
Q Consensus 608 --aR~-sP~dK~~lV~~Lq~~----g-~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAk----eaa-Diil--~ddnf 672 (892)
-.. .+.+|..-++.+.+. . +.|+++||+.||.+|++.|++|++|+ ++.+..| .+| +.+. ...+=
T Consensus 181 ~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~ 259 (273)
T PRK00192 181 RFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGP 259 (273)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCc
Confidence 000 011677667666543 4 88999999999999999999999999 9999999 666 5666 34456
Q ss_pred hHHHHHHH
Q 043305 673 ASVVKVVR 680 (892)
Q Consensus 673 ~sIv~~i~ 680 (892)
.++.++++
T Consensus 260 ~Gv~~~l~ 267 (273)
T PRK00192 260 EGWAEAIN 267 (273)
T ss_pred HHHHHHHH
Confidence 67777664
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.43 E-value=8.7e-07 Score=93.05 Aligned_cols=116 Identities=23% Similarity=0.297 Sum_probs=86.2
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCC---CCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADA---TEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~---~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
.+++|++.+.++.++++|.+|+++||-...-+..||+.+|+...-... .++ +++|
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-~ltG--------------------- 133 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-KLTG--------------------- 133 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC-EEec---------------------
Confidence 588999999999999999999999999999999999999997532200 001 1222
Q ss_pred eEEEe-ccCHhhHHHHHHHHHHc-CC---eEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEE
Q 043305 604 ICVMG-RSSPSDKLLLVQALRKR-GD---VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIII 667 (892)
Q Consensus 604 ~~V~a-R~sP~dK~~lV~~Lq~~-g~---vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil 667 (892)
.|.. .+..+.|...++.+.+. |. .+.++|||.||.|||+.|+.+++.. .....+..|+..+
T Consensus 134 -~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~ 199 (212)
T COG0560 134 -RVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRI 199 (212)
T ss_pred -eeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhc
Confidence 2222 33447888888666653 54 4888999999999999999999985 5544445555444
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.2e-06 Score=90.02 Aligned_cols=110 Identities=20% Similarity=0.280 Sum_probs=83.4
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhh
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSD 614 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~d 614 (892)
.+|+.+++.|+++.++||.....+..+++++|+... ..| .++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~---------f~g-----------------------------~~~ 96 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL---------YQG-----------------------------QSN 96 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee---------ecC-----------------------------CCc
Confidence 699999999999999999999999999999998521 111 123
Q ss_pred HHHHHHHHHH-c---CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC----chHHHHHHHHHH
Q 043305 615 KLLLVQALRK-R---GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN----FASVVKVVRWGR 683 (892)
Q Consensus 615 K~~lV~~Lq~-~---g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn----f~sIv~~i~~GR 683 (892)
|...++.+.+ . .+.|+|+||+.||.+|++.|+++++++ ++.+..+..+|+++...+ +..+.+.+...|
T Consensus 97 k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 97 KLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 4444444433 3 357999999999999999999999987 777888899999996432 455555554333
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=2e-06 Score=89.23 Aligned_cols=125 Identities=20% Similarity=0.257 Sum_probs=90.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+++ +++.++|+-....+..+.+++|+...-. .....++.. .+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~---~~~~~~~~~--------------------~i~ 123 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC---HSLEVDEDG--------------------MIT 123 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc---ceEEECCCC--------------------eEE
Confidence 4689999999999999 9999999999999999999999853110 001111000 011
Q ss_pred e--ccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccE-EEcCCCchHHHHHH
Q 043305 608 G--RSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDI-IILDDNFASVVKVV 679 (892)
Q Consensus 608 a--R~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDi-il~ddnf~sIv~~i 679 (892)
. -..|..|...++.++..++.+.|+|||.||.+|.+.|++|+..+ .+.+...+.++. ++. ++..+...+
T Consensus 124 ~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 195 (205)
T PRK13582 124 GYDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAI 195 (205)
T ss_pred CccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHH
Confidence 0 12477888999999888899999999999999999999999876 333344455665 443 466666555
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.7e-06 Score=87.66 Aligned_cols=117 Identities=21% Similarity=0.268 Sum_probs=81.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++|++.+.++.|++.|+++.++|+-....+..+++..|+..--. .....+...+ .. + . .+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~---~~~~~~~~g~--~~--------p----~--~~ 140 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYS---NELVFDEKGF--IQ--------P----D--GI 140 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEE---EEEEEcCCCe--Ee--------c----c--ee
Confidence 589999999999999999999999999999999999999752110 0001100000 00 0 1 11
Q ss_pred eccCHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhccc
Q 043305 608 GRSSPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSD 664 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaD 664 (892)
-...|..|...++.+.++ .+.+.++||+.||.+|++.||++++++ .+....+.++|
T Consensus 141 ~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 141 VRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred eEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 123456677777776554 345999999999999999999999997 43444555555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.24 E-value=7.6e-06 Score=87.21 Aligned_cols=66 Identities=20% Similarity=0.298 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhccc----EEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSD----IIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaD----iil~ddnf~sIv~~i~ 680 (892)
+|...++.|.++ | +.|+++||+.||.+||+.|++|++|+ ++.+..|+.|| ++...++=.++.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 788888888764 3 35888999999999999999999999 89999999999 7766666677888774
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.9e-06 Score=86.68 Aligned_cols=92 Identities=30% Similarity=0.369 Sum_probs=69.6
Q ss_pred hhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEecc
Q 043305 531 PSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRS 610 (892)
Q Consensus 531 ~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~ 610 (892)
+++.+.|+.++++|++++++||+....++.+|+.+|+.... ++ +.++..- ......+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-------v~-~~~~~~~-------------~~~~~~~~~ 150 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-------VI-GNELFDN-------------GGGIFTGRI 150 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-------EE-EEEEECT-------------TCCEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-------EE-EEeeeec-------------ccceeeeeE
Confidence 78889999999999999999999999999999999997421 11 1111000 012344555
Q ss_pred CHh---hHHHHHHHH------HHcCCeEEEeCCCCCChHhhh
Q 043305 611 SPS---DKLLLVQAL------RKRGDVVAVTGDGTNDAPALH 643 (892)
Q Consensus 611 sP~---dK~~lV~~L------q~~g~vVa~tGDG~NDapALk 643 (892)
+|. .|...++.+ +.....+.++|||.||.||||
T Consensus 151 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 151 TGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 544 499999999 334789999999999999996
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.7e-05 Score=83.27 Aligned_cols=136 Identities=14% Similarity=0.092 Sum_probs=89.7
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
-+++||+.+.++.|++.|+++.++||.....+..+.+..+...... .+...++|..+.... + .-..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~--~n~~~~~~~~~~~~~--------p----~~~~ 134 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIY--CNEADFSNEYIHIDW--------P----HPCD 134 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEE--eceeEeeCCeeEEeC--------C----CCCc
Confidence 3789999999999999999999999999999999998875432110 011223333221100 0 0000
Q ss_pred E---eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhh--cccEEEcCCCchHHHHHHH
Q 043305 607 M---GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE--SSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 607 ~---aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAke--aaDiil~ddnf~sIv~~i~ 680 (892)
+ ..| ...|..+++.++...+.+.|+|||.||.+|++.||+++|=+ .-.+-.++ .+.+.+ ++|..|...++
T Consensus 135 ~~~~~~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 135 GTCQNQC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred cccccCC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 0 012 35799999999888888899999999999999999988754 11111111 122222 46888877764
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.1e-05 Score=82.93 Aligned_cols=128 Identities=23% Similarity=0.297 Sum_probs=84.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+.....-. ..+..+.. -.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~-~~~~~~~~--------------------g~~~ 142 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFA-NQILFGDS--------------------GEYA 142 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEE-eEEEEcCC--------------------CcEE
Confidence 37899999999999999999999999999999999999996311000 00000000 0000
Q ss_pred ec------cCHhhHHHHHHHHHHc--CCeEEEeCCCCCChHhhhc--CCeeEeecCCC-cHhhhhcccEEEcCCCchHHH
Q 043305 608 GR------SSPSDKLLLVQALRKR--GDVVAVTGDGTNDAPALHE--ADIGLAMGIQG-TEVAKESSDIIILDDNFASVV 676 (892)
Q Consensus 608 aR------~sP~dK~~lV~~Lq~~--g~vVa~tGDG~NDapALk~--AdVGIAmgi~g-t~vAkeaaDiil~ddnf~sIv 676 (892)
+. +.+..|...++.++++ .+.+.++||+.||..|.+. ++++++.|... .+.....+|+++.+ +..+.
T Consensus 143 g~~~~~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~ 220 (224)
T PLN02954 143 GFDENEPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLI 220 (224)
T ss_pred CccCCCcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHH
Confidence 00 1123476777776654 3568899999999999877 57777666222 23345568999864 66665
Q ss_pred HH
Q 043305 677 KV 678 (892)
Q Consensus 677 ~~ 678 (892)
+.
T Consensus 221 ~~ 222 (224)
T PLN02954 221 EV 222 (224)
T ss_pred Hh
Confidence 43
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00061 Score=80.03 Aligned_cols=94 Identities=20% Similarity=0.277 Sum_probs=71.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
|++|++.+.+++++++|+++.++|+-+...+..+++..|+.+ .++.++. .
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd--------~Vigsd~----------------------~ 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD--------GVFASDG----------------------T 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC--------EEEeCCC----------------------c
Confidence 578999999999999999999999999999999999999832 2222211 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeec
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmg 652 (892)
.++.|+.|...++..... +-+.++||..||.|+++.|+-.++++
T Consensus 122 ~~~kg~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 122 TNLKGAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred cccCCchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 135566676554422222 22577899999999999999999997
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.1e-05 Score=78.71 Aligned_cols=118 Identities=23% Similarity=0.357 Sum_probs=95.4
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhh
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSD 614 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~d 614 (892)
-.|+.+.++||+|-++||.+....+.=|+++||. .+..| -++
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~---------~~~qG-----------------------------~~d 83 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK---------HLYQG-----------------------------ISD 83 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc---------eeeec-----------------------------hHh
Confidence 5789999999999999999999999999999996 22222 247
Q ss_pred HHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC----chHHHHHHHHHHHHH
Q 043305 615 KLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN----FASVVKVVRWGRSVY 686 (892)
Q Consensus 615 K~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn----f~sIv~~i~~GR~v~ 686 (892)
|....+.|.++ -+-||++||-.||.|+|+..++++|.. .+.+-.++.||+|+.... ++.+.++|..++.-+
T Consensus 84 K~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~ 162 (170)
T COG1778 84 KLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKL 162 (170)
T ss_pred HHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcH
Confidence 77777766654 467999999999999999999999987 788888999999987543 666777777777766
Q ss_pred HHHHH
Q 043305 687 ANIQK 691 (892)
Q Consensus 687 ~nI~k 691 (892)
+-..+
T Consensus 163 d~~~~ 167 (170)
T COG1778 163 DEALG 167 (170)
T ss_pred HHHHh
Confidence 65544
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.3e-05 Score=80.58 Aligned_cols=110 Identities=21% Similarity=0.286 Sum_probs=78.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
.+-||+++.+..||+.|.+|.++||--..-+..+|.++||...+...+.-..-...+|...+ ...-.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd-------------~~~pt 154 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFD-------------TNEPT 154 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccc-------------cCCcc
Confidence 35799999999999999999999999999999999999998654432211111100111000 00011
Q ss_pred eccCHhhHHHHHHHHHHc--CCeEEEeCCCCCChHhhhcCCeeEeec
Q 043305 608 GRSSPSDKLLLVQALRKR--GDVVAVTGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~--g~vVa~tGDG~NDapALk~AdVGIAmg 652 (892)
+| ..-|...++.+++. -..++|+|||.||.+|+..||-=|+.|
T Consensus 155 sd--sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 155 SD--SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cc--CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 12 24788999999885 468999999999999999988777665
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.99 E-value=5.8e-05 Score=81.20 Aligned_cols=154 Identities=15% Similarity=0.119 Sum_probs=98.5
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCc--CCCCCCceecchhh------h-----------
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSE--ADATEPNIIEGKSF------R----------- 586 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~--~~~~~~~vi~G~~~------~----------- 586 (892)
..+..|...+.++++++.||.++.+||......+.+.++.++..++ ...+++.+..+... .
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3467899999999999999999999999999999999999987652 11223323221100 0
Q ss_pred ---------hc-----------------CHHH-------HHHHhcccccceEEE-e-----ccCH--hhHHHHHHHHHHc
Q 043305 587 ---------AL-----------------SETQ-------REEIAGEDFGMICVM-G-----RSSP--SDKLLLVQALRKR 625 (892)
Q Consensus 587 ---------~l-----------------~~~e-------~~~i~~~~~~~~~V~-a-----R~sP--~dK~~lV~~Lq~~ 625 (892)
.+ ..+. +.+.+.+...++.+. + ...| .+|...++.|+++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 0011 111111100011111 1 1122 4788888888764
Q ss_pred ----CCeEEEeCCCCCChHhhhc-CCeeEeecCCCcHhhhhccc-------EEEcCCCchHHHHHHH
Q 043305 626 ----GDVVAVTGDGTNDAPALHE-ADIGLAMGIQGTEVAKESSD-------IIILDDNFASVVKVVR 680 (892)
Q Consensus 626 ----g~vVa~tGDG~NDapALk~-AdVGIAmgi~gt~vAkeaaD-------iil~ddnf~sIv~~i~ 680 (892)
.+.|.++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++-..-.-++|.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3679999999999999998 77999999 88887776443 4333334466666663
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.96 E-value=2.9e-05 Score=79.01 Aligned_cols=113 Identities=15% Similarity=0.113 Sum_probs=77.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++|++.+.++.|++.|+++.++|+.+......+.+..|+...-. .++..+...+ . .......+. +..++
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~-----~i~~~~~~~~-~-~g~~~~~~~---~~~~~ 141 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFI-----EIYSNPASFD-N-DGRHIVWPH---HCHGC 141 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhee-----EEeccCceEC-C-CCcEEEecC---CCCcc
Confidence 789999999999999999999999999999999999999853211 1121111000 0 000000000 00011
Q ss_pred ec-cCHhhHHHHHHHHHHc-CCeEEEeCCCCCChHhhhcCCeeEe
Q 043305 608 GR-SSPSDKLLLVQALRKR-GDVVAVTGDGTNDAPALHEADIGLA 650 (892)
Q Consensus 608 aR-~sP~dK~~lV~~Lq~~-g~vVa~tGDG~NDapALk~AdVGIA 650 (892)
.. .....|..+++.++++ .+.+.++|||.||..|.++||+-+|
T Consensus 142 ~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 142 CSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 11 1123699999999887 8889999999999999999998775
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.8e-05 Score=83.82 Aligned_cols=89 Identities=24% Similarity=0.332 Sum_probs=68.8
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceecCcEEEEEEeeccccccccceEEeeccccccchhhhHHHHHHHH
Q 043305 192 GRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVA 271 (892)
Q Consensus 192 ~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 271 (892)
+++.++...+.+...++.+.++.+++.++++... .. ...+...+..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~----------------~~~~~~~~~~~ 188 (230)
T PF00122_consen 142 KKSPLERKLNKIAKILIIIILAIAILVFIIWFFN-----------------DS----------------GISFFKSFLFA 188 (230)
T ss_dssp S-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG-----------------ST----------------TCHCCHHHHHH
T ss_pred cchhhhhhhHHHHHHHHhcccccchhhhccceec-----------------cc----------------ccccccccccc
Confidence 4577788888887777766666666666544320 00 02356778889
Q ss_pred HHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccc
Q 043305 272 VTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACET 313 (892)
Q Consensus 272 vtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~Et 313 (892)
+++++++||++||+++++++.+++++|+++|++||+++++|+
T Consensus 189 i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 189 ISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred cceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 999999999999999999999999999999999999999996
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.8e-05 Score=82.00 Aligned_cols=135 Identities=16% Similarity=0.123 Sum_probs=86.3
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++||+.+.++.|++.|+++.++||-....+..+.+.. +...... .+...++|+.+..- .+ .-...
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~-~n~~~~~~~~~~~~--------kp----~p~~~ 139 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIY-CNGSDFSGEYITIT--------WP----HPCDE 139 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEE-EeEEEecCCeeEEe--------cc----CCccc
Confidence 68999999999999999999999999999999999988 6431100 00011222221100 00 00000
Q ss_pred ---eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhh--cccEEEcCCCchHHHHHHH
Q 043305 608 ---GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE--SSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 ---aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAke--aaDiil~ddnf~sIv~~i~ 680 (892)
.++ ...|..+++.++...+.+.++|||.||.+|.+.||+.++-+ .-.+.+++ .+.+.+ ++|..|...++
T Consensus 140 ~~~~~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l~ 213 (219)
T PRK09552 140 HCQNHC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTELK 213 (219)
T ss_pred cccccC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHHH
Confidence 011 13488888888877778999999999999999999977632 11122222 233333 45888777663
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.86 E-value=4.4e-05 Score=81.01 Aligned_cols=43 Identities=12% Similarity=0.094 Sum_probs=38.8
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCC
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILT 569 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~ 569 (892)
+..-+++.++|++++++|++++++||.....+..+.+++|+..
T Consensus 14 ~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 14 GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 4455679999999999999999999999999999999999854
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.85 E-value=3.6e-05 Score=77.74 Aligned_cols=97 Identities=22% Similarity=0.244 Sum_probs=70.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC---C-CCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD---A-TEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~---~-~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
+++|++.+.++.+++.|+++.++||.....+..+++..|+..--.. . .++ .++|+.. . +
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g-~~~g~~~------------~----~ 135 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG-LLTGPIE------------G----Q 135 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC-EEeCccC------------C----c
Confidence 4689999999999999999999999999999999999998631100 0 000 1111100 0 0
Q ss_pred eEEEeccCHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcC
Q 043305 604 ICVMGRSSPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEA 645 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~A 645 (892)
..+.+..|...++.++++ .+.+.++|||.||.+|++.|
T Consensus 136 ----~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 ----VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ----ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 124567899999887664 35689999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.84 E-value=6.9e-05 Score=77.56 Aligned_cols=107 Identities=15% Similarity=0.125 Sum_probs=77.1
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecch-hhhhcCHHHHHHHhcccccce
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGK-SFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~-~~~~l~~~e~~~i~~~~~~~~ 604 (892)
..+++|++.+.++.+++.|+++.++||-....+..+++.+|+..--.. .+....+ .+. -
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~---~l~~~~~g~~~-----------------g 144 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGT---RLEESEDGIYT-----------------G 144 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEec---ceEEcCCCEEe-----------------C
Confidence 346899999999999999999999999999999999999998631110 0111000 000 0
Q ss_pred EEE-eccCHhhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeec
Q 043305 605 CVM-GRSSPSDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 605 ~V~-aR~sP~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmg 652 (892)
.+. -.+.++.|...++.+.++ + +.+.++||+.||.|+++.|+.++++.
T Consensus 145 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 145 NIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 000 124567888878776543 3 36888999999999999999999875
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=9.9e-05 Score=77.59 Aligned_cols=128 Identities=23% Similarity=0.338 Sum_probs=87.9
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
-++.||+.+.++.+++.|+++.++||........+.+..|+...-. .++.+....
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~-------------------- 146 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS-----VVIGGDSLP-------------------- 146 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc-----EEEcCCCCC--------------------
Confidence 3578999999999999999999999999999999999999853211 122221110
Q ss_pred EeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe-eEee--cCC-CcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI-GLAM--GIQ-GTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV-GIAm--gi~-gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
...-.|+--..+++.++...+.+.++||+.||..|.+.|++ +|.+ |.. ..+.....+|+++. ++..+...+.+
T Consensus 147 ~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 147 NKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred CCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 00112332233444444445679999999999999999988 4444 322 23445567888884 58888887754
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.76 E-value=6.1e-05 Score=71.31 Aligned_cols=117 Identities=18% Similarity=0.203 Sum_probs=78.5
Q ss_pred EecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 524 GIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 524 gi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
.-..++++++.+.+++|++.|++++++||.....+....+.+|+..... .++................ ...
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~~~----~~~ 90 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFD-----PVITSNGAAIYYPKEGLFL----GGG 90 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhh-----heeccchhhhhcccccccc----ccc
Confidence 4456899999999999999999999999999999999999999842211 1111110000000000000 012
Q ss_pred eEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhc-CCeeE
Q 043305 604 ICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHE-ADIGL 649 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~-AdVGI 649 (892)
...+.+-.|+.+..+.+.+....+.+.++||+.||..|++. ..-+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 91 PFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred ccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 23445666777777777776666789999999999999998 44444
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00015 Score=76.35 Aligned_cols=39 Identities=13% Similarity=0.132 Sum_probs=36.1
Q ss_pred chhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCC
Q 043305 530 RPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL 568 (892)
Q Consensus 530 R~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~ 568 (892)
-+.++++|+.++++||++.++||.....+..+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0003 Score=74.28 Aligned_cols=127 Identities=23% Similarity=0.344 Sum_probs=94.0
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceE
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMIC 605 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~ 605 (892)
+.++-|+++++++.++++|++..++|++....+..+.+..|+...-. .++.+....
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~-----~i~g~~~~~------------------- 142 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD-----VIVGGDDVP------------------- 142 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc-----eEEcCCCCC-------------------
Confidence 44678999999999999999999999999999999999999975321 111111110
Q ss_pred EEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCC---eeEeecCC-CcHhhhhcccEEEcCCCchHHHHHH
Q 043305 606 VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEAD---IGLAMGIQ-GTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 606 V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~Ad---VGIAmgi~-gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
...-.|.....+.+.+....+.+.|+||..+|..|=|.|+ ||+..|.. +.......+|+++.+ +..+...+
T Consensus 143 -~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 143 -PPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred -CCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 0112455555555555544447999999999999999998 88888853 556677789999965 77766654
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00074 Score=78.12 Aligned_cols=151 Identities=18% Similarity=0.138 Sum_probs=92.5
Q ss_pred CchhHHHHH-HHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcC--CCCCCceecchhh--------------------
Q 043305 529 CRPSVKDAI-RLCRIAGVKVRMVTGDNIQTARAIALECGILTSEA--DATEPNIIEGKSF-------------------- 585 (892)
Q Consensus 529 lR~~v~~aI-~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~--~~~~~~vi~G~~~-------------------- 585 (892)
+.+...+++ +++++.|+.++..||..+..++.+.++.++..++. ..++..+..+...
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333445555 88999999999999999999999999999887631 0111111111100
Q ss_pred ---hhc--------------------CHHH-------HHHHhcccccceEEE------eccCH--hhHHHHHHHHHHc--
Q 043305 586 ---RAL--------------------SETQ-------REEIAGEDFGMICVM------GRSSP--SDKLLLVQALRKR-- 625 (892)
Q Consensus 586 ---~~l--------------------~~~e-------~~~i~~~~~~~~~V~------aR~sP--~dK~~lV~~Lq~~-- 625 (892)
..+ .+++ +.+.+.+.-..+.+. -...| .+|..-++.|.++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 000 0111 111111000011211 12233 3588888888765
Q ss_pred --C---CeEEEeCCCCCChHhhhcCC-eeEeecCCCcHhhhhcc--------cEEEcCC-CchHHHHHHH
Q 043305 626 --G---DVVAVTGDGTNDAPALHEAD-IGLAMGIQGTEVAKESS--------DIIILDD-NFASVVKVVR 680 (892)
Q Consensus 626 --g---~vVa~tGDG~NDapALk~Ad-VGIAmgi~gt~vAkeaa--------Diil~dd-nf~sIv~~i~ 680 (892)
| +.|.++||+.||.+||+.|+ .||+|| ++.+..|+.+ +++..++ +-++|.++++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 2 47899999999999999999 699999 8888877643 5554432 4556666664
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00061 Score=81.69 Aligned_cols=40 Identities=18% Similarity=0.207 Sum_probs=36.6
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL 568 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~ 568 (892)
.-+.+.++|+.++++||.++++||.....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3457899999999999999999999999999999999974
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00089 Score=72.92 Aligned_cols=42 Identities=2% Similarity=-0.018 Sum_probs=38.5
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILT 569 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~ 569 (892)
..-+.+.++|++|+++||.|++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 355679999999999999999999999999999999999864
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00052 Score=71.35 Aligned_cols=125 Identities=18% Similarity=0.227 Sum_probs=84.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+++|+++.++||.....+..+-+..|+...-. .++.+.+. ..
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~-----~i~~~~~~--------------------~~ 129 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFD-----HVIGSDEV--------------------PR 129 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhee-----eEEecCcC--------------------CC
Confidence 678999999999999999999999999999999999999853211 11111110 01
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEe---ecC-CCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLA---MGI-QGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIA---mgi-~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
.+-.|+-=..+++.++-..+.+.|+||+.+|..+-++|++... -|. +..+..++.+|+++.+ +..+..++
T Consensus 130 ~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 130 PKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred CCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 1222332233334343335679999999999999999998643 231 2233467789998854 66666554
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.001 Score=72.67 Aligned_cols=125 Identities=20% Similarity=0.299 Sum_probs=79.8
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
.++.|++.++++.|++.|+++.++||-....+..+....|+...- ..++.+.+..
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-----~~i~~~d~~~-------------------- 154 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-----RWIIGGDTLP-------------------- 154 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-----eEEEecCCCC--------------------
Confidence 368899999999999999999999999999999888888875311 0122211100
Q ss_pred EeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee-Ee--ecCC-CcHhhhhcccEEEcCCCchHHHHH
Q 043305 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG-LA--MGIQ-GTEVAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG-IA--mgi~-gt~vAkeaaDiil~ddnf~sIv~~ 678 (892)
..+-.|+-=..+.+.+.-..+.+.++||+.||..+-+.|++- ++ .|.. ..+..+..+|.++.+ +..+..+
T Consensus 155 ~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~--l~el~~~ 228 (272)
T PRK13223 155 QKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDD--LRALLPG 228 (272)
T ss_pred CCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECC--HHHHHHH
Confidence 001112212223333322346799999999999999999973 33 3321 222345678998854 6555543
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00097 Score=69.44 Aligned_cols=120 Identities=18% Similarity=0.220 Sum_probs=79.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+-+...+..+.+..|+...-. .++.+.+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~---------------------- 137 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS-----VLIGGDSL---------------------- 137 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc-----EEEecCCC----------------------
Confidence 578999999999999999999999999999999999999863211 12211110
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCCCCChHhhhcCCeeEeecCCC--c--HhhhhcccEEEcCCCchHHHH
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDGTNDAPALHEADIGLAMGIQG--T--EVAKESSDIIILDDNFASVVK 677 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~NDapALk~AdVGIAmgi~g--t--~vAkeaaDiil~ddnf~sIv~ 677 (892)
.+..|. ...+.+.+++. .+.+.++||+.||..|.++|++-...-..| + +.....+|+++.+ +..+..
T Consensus 138 ~~~Kp~-p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~~ 211 (213)
T TIGR01449 138 AQRKPH-PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELPP 211 (213)
T ss_pred CCCCCC-hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHHh
Confidence 111221 12233333333 466999999999999999999865421112 1 2334568888754 655543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0016 Score=71.00 Aligned_cols=145 Identities=12% Similarity=0.171 Sum_probs=86.0
Q ss_pred CCchhHHHHHHHHHh-CCCEEEEEecCCHHHHHHHHHHcCCC--CCcCC----CCC------------------------
Q 043305 528 PCRPSVKDAIRLCRI-AGVKVRMVTGDNIQTARAIALECGIL--TSEAD----ATE------------------------ 576 (892)
Q Consensus 528 plR~~v~~aI~~l~~-AGI~v~mvTGDn~~TA~aIA~~~GI~--~~~~~----~~~------------------------ 576 (892)
.+-+++.+++++|++ .|++|.++||.....+..+.+..++. ..+.. ..+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345899999999998 89999999999999999888777642 11110 000
Q ss_pred ---Cceecch------hhhhcC--HHHHHH---HhcccccceEEE-----e--ccCHhhHHHHHHHHHHc----CCeEEE
Q 043305 577 ---PNIIEGK------SFRALS--ETQREE---IAGEDFGMICVM-----G--RSSPSDKLLLVQALRKR----GDVVAV 631 (892)
Q Consensus 577 ---~~vi~G~------~~~~l~--~~e~~~---i~~~~~~~~~V~-----a--R~sP~dK~~lV~~Lq~~----g~vVa~ 631 (892)
+..++-+ .++... ++.+.. .+.+.+....+. - +..-.+|..-++.+.+. ...|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000000 001111 111111 111111111111 1 22224888888877654 357888
Q ss_pred eCCCCCChHhhhcC----CeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 632 TGDGTNDAPALHEA----DIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 632 tGDG~NDapALk~A----dVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
+||+.||.+|++.+ ++||+|| ++. ..|++.|.+ -..+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC--HHHHHHHH
Confidence 99999999999999 9999999 443 446777764 44444433
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0025 Score=66.73 Aligned_cols=125 Identities=17% Similarity=0.196 Sum_probs=83.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+...-. .++.+.+.. .
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~-----~i~~~~~~~--------------------~ 136 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFD-----VVITLDDVE--------------------H 136 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhcee-----EEEecCcCC--------------------C
Confidence 367999999999999999999999999999999999999863211 112111100 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee---EeecCCCc-HhhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG---LAMGIQGT-EVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG---IAmgi~gt-~vAkeaaDiil~ddnf~sIv~~i 679 (892)
.+..|+--..+.+.+....+.+.++||+.+|..|-++|++- +.-|.... +.....+|.++. ++..+...+
T Consensus 137 ~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 137 AKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred CCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 11223333334444433346789999999999999999984 33342222 234456888875 477776654
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0027 Score=68.34 Aligned_cols=53 Identities=21% Similarity=0.285 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHHcCCeEEEeCC----CCCChHhhhcC-CeeEeecCCCcHhhhhcccEE
Q 043305 613 SDKLLLVQALRKRGDVVAVTGD----GTNDAPALHEA-DIGLAMGIQGTEVAKESSDII 666 (892)
Q Consensus 613 ~dK~~lV~~Lq~~g~vVa~tGD----G~NDapALk~A-dVGIAmgi~gt~vAkeaaDii 666 (892)
-+|..-++.|.++.+.|+++|| |-||.+||+.| -.|++++ +..+..|..+.++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 4788888888777788999999 99999999976 5677776 7888877766544
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0037 Score=65.87 Aligned_cols=119 Identities=14% Similarity=0.241 Sum_probs=78.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.++++.|++.|+++.++|+........+.+..||...-. .++.+.+.. .
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~--------------------~ 146 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD-----ALASAEKLP--------------------Y 146 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc-----EEEEcccCC--------------------C
Confidence 578999999999999999999999999999999999999864321 122221110 0
Q ss_pred eccCHhhHHHHHHHHHHcC---CeEEEeCCCCCChHhhhcCCeeEeecCCC---cHhhhhcccEEEcCCCchHHH
Q 043305 608 GRSSPSDKLLLVQALRKRG---DVVAVTGDGTNDAPALHEADIGLAMGIQG---TEVAKESSDIIILDDNFASVV 676 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g---~vVa~tGDG~NDapALk~AdVGIAmgi~g---t~vAkeaaDiil~ddnf~sIv 676 (892)
.+-.|+ .+.+.+++.| +.+.++||..||+.+-++|++....-..+ .+.-...+|+++.+ |..+.
T Consensus 147 ~Kp~~~---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 147 SKPHPE---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred CCCCHH---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 112232 2333444433 56899999999999999999865432122 12222357777754 65554
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0035 Score=65.05 Aligned_cols=39 Identities=28% Similarity=0.390 Sum_probs=35.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECG 566 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~G 566 (892)
++.+++.++++++++.|+++.++||.....+..+.++.+
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477999999999999999999999999999999998844
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.011 Score=64.49 Aligned_cols=130 Identities=14% Similarity=0.186 Sum_probs=82.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCC-C------CCceecchhhhhcCHHHHHHHhccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADA-T------EPNIIEGKSFRALSETQREEIAGED 600 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~-~------~~~vi~G~~~~~l~~~e~~~i~~~~ 600 (892)
++|||+.+.++.|++.||++.++||-....+..+.++.|+..+.... . ..-+.+|.. . +
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~--~----------P-- 186 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK--G----------P-- 186 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC--C----------C--
Confidence 68999999999999999999999999999999999999986433210 0 001112210 0 0
Q ss_pred ccceEEEeccCHhhHHHHHHH-----HH--HcCCeEEEeCCCCCChHhhhcC---CeeEeecC-CC-----cHhhhhccc
Q 043305 601 FGMICVMGRSSPSDKLLLVQA-----LR--KRGDVVAVTGDGTNDAPALHEA---DIGLAMGI-QG-----TEVAKESSD 664 (892)
Q Consensus 601 ~~~~~V~aR~sP~dK~~lV~~-----Lq--~~g~vVa~tGDG~NDapALk~A---dVGIAmgi-~g-----t~vAkeaaD 664 (892)
- +....|...+.. ++ .....|.++|||.||++|-.-. +--+.+|- +. -+.-+++-|
T Consensus 187 --~------i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~D 258 (277)
T TIGR01544 187 --L------IHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYD 258 (277)
T ss_pred --c------ccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCC
Confidence 0 011345544432 22 1235788999999999995543 12233331 11 122467899
Q ss_pred EEEcCCCchHHHHHH
Q 043305 665 IIILDDNFASVVKVV 679 (892)
Q Consensus 665 iil~ddnf~sIv~~i 679 (892)
|||.+|.=-.++.+|
T Consensus 259 ivl~~D~t~~v~~~i 273 (277)
T TIGR01544 259 IVLVQDETLEVANSI 273 (277)
T ss_pred EEEECCCCchHHHHH
Confidence 999999766666554
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0055 Score=65.07 Aligned_cols=127 Identities=17% Similarity=0.167 Sum_probs=85.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+...- ..++.+.... .
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~--------------------~ 149 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC-----AVLIGGDTLA--------------------E 149 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc-----cEEEecCcCC--------------------C
Confidence 57899999999999999999999999999888888888885321 1222221100 1
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEe---ecCC-Cc-HhhhhcccEEEcCCCchHHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLA---MGIQ-GT-EVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIA---mgi~-gt-~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
.+-.|+-=..+++.+.-..+.+.|+||+.||..|-+.|++-.. -|.. .. +.....+|+++.+ +..|...+-|
T Consensus 150 ~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~~~~ 226 (229)
T PRK13226 150 RKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNPATW 226 (229)
T ss_pred CCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHHhcC
Confidence 1223433334444444445779999999999999999987642 2311 11 1234568998854 7777766554
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0095 Score=65.20 Aligned_cols=119 Identities=17% Similarity=0.219 Sum_probs=80.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+.+...+..+-+.+|+...-. .++.+..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~-----~vi~~~~----------------------- 193 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS-----VVQAGTP----------------------- 193 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE-----EEEecCC-----------------------
Confidence 568999999999999999999999999999999999999863211 1222211
Q ss_pred eccCHhhHHHHHHHHHH---cCCeEEEeCCCCCChHhhhcCCeeEe---ecCCCc-HhhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRK---RGDVVAVTGDGTNDAPALHEADIGLA---MGIQGT-EVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~---~g~vVa~tGDG~NDapALk~AdVGIA---mgi~gt-~vAkeaaDiil~ddnf~sIv~~i 679 (892)
.+..+..+.+.+++ ..+.++|+||+.+|..|-++|++-.. -|.... +.....+|+++. ++..|...+
T Consensus 194 ---~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 194 ---ILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred ---CCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 00011222333333 34579999999999999999987543 221111 123456899885 477777655
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.017 Score=71.87 Aligned_cols=60 Identities=20% Similarity=0.246 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHc--CCeEEEeCCCCCChHhhhcC---CeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 613 SDKLLLVQALRKR--GDVVAVTGDGTNDAPALHEA---DIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 613 ~dK~~lV~~Lq~~--g~vVa~tGDG~NDapALk~A---dVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
-+|...++.+.+. .+.|+++||+.||.+|++.+ ..+++|| + ++.+|++.+.+. ..+.+.+
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~----~~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-P----GESRARYRLPSQ--REVRELL 720 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-C----CCCcceEeCCCH--HHHHHHH
Confidence 5799999888874 35899999999999999986 6899998 4 356788888752 4444444
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.011 Score=62.04 Aligned_cols=122 Identities=25% Similarity=0.374 Sum_probs=80.9
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCC--CCcCCCCCCceecchhhhhcCHHHHHHHhcccccce
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL--TSEADATEPNIIEGKSFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~--~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~ 604 (892)
.++.||+.+.++.|++.|+++.++|+-....+..+.+..|+. ..- ..++.+.+..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-----~~i~~~~~~~------------------ 142 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-----DAVVCPSDVA------------------ 142 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-----CEEEcCCcCC------------------
Confidence 378999999999999999999999999999999999999986 211 1222222110
Q ss_pred EEEeccCHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeec-CCCcH----hhhhcccEEEcCCCchHH
Q 043305 605 CVMGRSSPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMG-IQGTE----VAKESSDIIILDDNFASV 675 (892)
Q Consensus 605 ~V~aR~sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmg-i~gt~----vAkeaaDiil~ddnf~sI 675 (892)
..+-.|+ .+-+.+++. .+.+.|+||+.+|..|-+.|++..+++ ..|.. .....+|.++.+ ++.+
T Consensus 143 --~~KP~p~---~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~--~~~l 215 (220)
T TIGR03351 143 --AGRPAPD---LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDS--VADL 215 (220)
T ss_pred --CCCCCHH---HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecC--HHHH
Confidence 0111222 222333332 357999999999999999999986322 13321 223457877743 6665
Q ss_pred HHH
Q 043305 676 VKV 678 (892)
Q Consensus 676 v~~ 678 (892)
..+
T Consensus 216 ~~~ 218 (220)
T TIGR03351 216 PAL 218 (220)
T ss_pred HHh
Confidence 543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.014 Score=63.45 Aligned_cols=123 Identities=13% Similarity=0.164 Sum_probs=80.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+..... ..++.+.+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~----d~i~~~~~~---------------------- 154 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP----DHVVTTDDV---------------------- 154 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc----eEEEcCCcC----------------------
Confidence 467899999999999999999999999998888888777653210 112222110
Q ss_pred eccCHhhHHHHHHHHHHcC----CeEEEeCCCCCChHhhhcCCe---eEeecCCC------------------------c
Q 043305 608 GRSSPSDKLLLVQALRKRG----DVVAVTGDGTNDAPALHEADI---GLAMGIQG------------------------T 656 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g----~vVa~tGDG~NDapALk~AdV---GIAmgi~g------------------------t 656 (892)
.+..| +...+.+.+++.| +.+.|+||+.+|..|=+.|++ |+.-|... .
T Consensus 155 ~~~KP-~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (267)
T PRK13478 155 PAGRP-YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARA 233 (267)
T ss_pred CCCCC-ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHH
Confidence 01122 2233444555443 569999999999999999996 55444210 1
Q ss_pred HhhhhcccEEEcCCCchHHHHHH
Q 043305 657 EVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 657 ~vAkeaaDiil~ddnf~sIv~~i 679 (892)
+.....+|+++.+ +..+...+
T Consensus 234 ~l~~~~a~~vi~~--~~~l~~~l 254 (267)
T PRK13478 234 RLRAAGAHYVIDT--IADLPAVI 254 (267)
T ss_pred HHHHcCCCeehhh--HHHHHHHH
Confidence 2234468888854 77776655
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.013 Score=61.62 Aligned_cols=106 Identities=14% Similarity=0.192 Sum_probs=73.9
Q ss_pred CCchhHHHHHH-HHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIR-LCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~-~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
.++|++.+.|+ .+++.|++++++|+=....++.+|+..|+.... .++ |.++..-.. +++ .
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~------~~i-~t~le~~~g-----------g~~-~ 154 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL------NLI-ASQIERGNG-----------GWV-L 154 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC------cEE-EEEeEEeCC-----------ceE-c
Confidence 46899999996 788899999999999999999999996664321 111 222211000 010 1
Q ss_pred EeccCHhhHHHHHHHHHH-cCCeEEEeCCCCCChHhhhcCCeeEeec
Q 043305 607 MGRSSPSDKLLLVQALRK-RGDVVAVTGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~-~g~vVa~tGDG~NDapALk~AdVGIAmg 652 (892)
-..|..+.|..-++..-. ..+..-+=||+.||.|||+.||..+++.
T Consensus 155 g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 155 PLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred CccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 124667889877765432 2234557799999999999999999885
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.016 Score=60.80 Aligned_cols=105 Identities=14% Similarity=0.165 Sum_probs=74.1
Q ss_pred CCchhHHHHH-HHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhh-cCHHHHHHHhcccccceE
Q 043305 528 PCRPSVKDAI-RLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRA-LSETQREEIAGEDFGMIC 605 (892)
Q Consensus 528 plR~~v~~aI-~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~-l~~~e~~~i~~~~~~~~~ 605 (892)
+++|++.+.| +.+++.|+++.++|+-....+..+++..|+...+ .++ |.++.. ++ . + .
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~------~~i-~t~l~~~~t--------g----~-~ 154 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV------NLI-ASQMQRRYG--------G----W-V 154 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC------ceE-EEEEEEEEc--------c----E-E
Confidence 4589999999 5788899999999999999999999999963211 111 222211 00 0 1 0
Q ss_pred EEeccCHhhHHHHHHHHH-HcCCeEEEeCCCCCChHhhhcCCeeEeec
Q 043305 606 VMGRSSPSDKLLLVQALR-KRGDVVAVTGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 606 V~aR~sP~dK~~lV~~Lq-~~g~vVa~tGDG~NDapALk~AdVGIAmg 652 (892)
.-..|..+.|...++..- ......-+=||..||.|+|+.|+-+++++
T Consensus 155 ~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 155 LTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 112367789988777542 22344456799999999999999999985
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.036 Score=59.71 Aligned_cols=121 Identities=17% Similarity=0.172 Sum_probs=70.5
Q ss_pred HHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC--CCCCceecchhhhh-----------cC--------------
Q 043305 537 IRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD--ATEPNIIEGKSFRA-----------LS-------------- 589 (892)
Q Consensus 537 I~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~--~~~~~vi~G~~~~~-----------l~-------------- 589 (892)
++...+.++.++++||.+...++.+.++.++..++.- ..+..+..|+.+.. ..
T Consensus 28 l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l 107 (247)
T PF05116_consen 28 LEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGL 107 (247)
T ss_dssp HHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCE
T ss_pred HHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCc
Confidence 3334488999999999999999999999998765421 11222222221110 00
Q ss_pred -------------------------HHHHHHHhcccccceEEEe-c-----c--CHhhHHHHHHHHHHc----CCeEEEe
Q 043305 590 -------------------------ETQREEIAGEDFGMICVMG-R-----S--SPSDKLLLVQALRKR----GDVVAVT 632 (892)
Q Consensus 590 -------------------------~~e~~~i~~~~~~~~~V~a-R-----~--sP~dK~~lV~~Lq~~----g~vVa~t 632 (892)
-+++.+.+...--...+.. . . ....|...|+.|+++ .+.|.+.
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~a 187 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVA 187 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEE
T ss_pred ccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEE
Confidence 0233333322111122211 1 1 135799999999886 2457778
Q ss_pred CCCCCChHhhhcCCeeEeecCCCcHh
Q 043305 633 GDGTNDAPALHEADIGLAMGIQGTEV 658 (892)
Q Consensus 633 GDG~NDapALk~AdVGIAmgi~gt~v 658 (892)
||+.||.+||..++-||.+| ++.+.
T Consensus 188 GDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 188 GDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp ESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred eCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 99999999999999999999 66555
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.011 Score=63.11 Aligned_cols=88 Identities=22% Similarity=0.253 Sum_probs=62.0
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecC----CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccce
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGD----NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGD----n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~ 604 (892)
+.+++++.++.+++.|+++.++|+. ...++..+.+..||.... ..++.|....
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f-----~~i~~~d~~~------------------ 171 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN-----PVIFAGDKPG------------------ 171 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe-----eEEECCCCCC------------------
Confidence 4555999999999999999999998 777999999999996321 1222222110
Q ss_pred EEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 605 CVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 605 ~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
...| +|. ..+++.| ++.|+||..||..+-++|++-
T Consensus 172 ----~~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 172 ----QYQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred ----CCCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 0112 232 2445544 578999999999999998753
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.015 Score=62.14 Aligned_cols=89 Identities=21% Similarity=0.267 Sum_probs=63.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecC----CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGD----NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGD----n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
.+.+++++.++.+++.|+++.++||. ...|+..+.+..||...+. ...++.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~---f~vil~gd~~------------------ 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM---NPVIFAGDKP------------------ 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc---eeEEEcCCCC------------------
Confidence 46788999999999999999999995 4679999999999942211 0122222110
Q ss_pred eEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 604 ICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
.-.+|.. .+++.| ++.++||..+|..|-++|++-
T Consensus 173 -------~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 -------GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -------CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 0134443 444444 588999999999999999875
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.031 Score=60.72 Aligned_cols=121 Identities=10% Similarity=0.175 Sum_probs=79.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+...-. .++.+.+.. .
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd-----~ii~~~d~~--------------------~ 163 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFS-----VVLAAEDVY--------------------R 163 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCc-----EEEecccCC--------------------C
Confidence 568999999999999999999999999999999999999864211 233332211 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCc--HhhhhcccEEEcCCCchHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGT--EVAKESSDIIILDDNFASVV 676 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt--~vAkeaaDiil~ddnf~sIv 676 (892)
.+-.|+-=...++.+.-..+.+.|+||..+|..|=+.|++-.. +..|. ......+|.++.+ ++.+.
T Consensus 164 ~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i-~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 164 GKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCV-AVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEE-EEecCCchhhhccCCEEeCC--HHHHH
Confidence 1122322223333333334679999999999999999998432 22222 2222347887654 55543
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.03 Score=60.29 Aligned_cols=94 Identities=17% Similarity=0.196 Sum_probs=66.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++||.....+..+-+..|+..... ..++.+.+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~----d~ii~~~~~---------------------- 152 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP----DYNVTTDDV---------------------- 152 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC----ceEEccccC----------------------
Confidence 467899999999999999999999999999999999998864210 122222211
Q ss_pred eccCHhhHHHHHHHHHHcC----CeEEEeCCCCCChHhhhcCCee
Q 043305 608 GRSSPSDKLLLVQALRKRG----DVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g----~vVa~tGDG~NDapALk~AdVG 648 (892)
.+..| +...+.+.+++.| +.+.|+||..+|..|=+.|++-
T Consensus 153 ~~~KP-~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 153 PAGRP-APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred CCCCC-CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 01123 2223344444433 4599999999999999999964
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.041 Score=59.23 Aligned_cols=120 Identities=15% Similarity=0.121 Sum_probs=80.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||...-. .++.+.+.. .
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd-----~iv~~~~~~--------------------~ 162 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ-----AVIIGSECE--------------------H 162 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc-----EEEecCcCC--------------------C
Confidence 468899999999999999999999999999999999999864211 233332211 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEe---ecCCCcHhhhhcccEEEcCCCchH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLA---MGIQGTEVAKESSDIIILDDNFAS 674 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIA---mgi~gt~vAkeaaDiil~ddnf~s 674 (892)
.+-.|+-=....+.+.-..+.+.|+||..+|..|=++|++-.. -|....+.....+|+++.+ +..
T Consensus 163 ~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~--~~e 230 (248)
T PLN02770 163 AKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD--YED 230 (248)
T ss_pred CCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc--chh
Confidence 1223333333444444345679999999999999999987532 2211112234468888765 544
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.016 Score=58.27 Aligned_cols=105 Identities=15% Similarity=0.142 Sum_probs=74.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcC----CCCCcCCCC-CCceecchhhhhcCHHHHHHHhccccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECG----ILTSEADAT-EPNIIEGKSFRALSETQREEIAGEDFG 602 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~G----I~~~~~~~~-~~~vi~G~~~~~l~~~e~~~i~~~~~~ 602 (892)
.++|+-++.++.|++.+|+++++|+--..-...+-...+ |..-+...+ ..+-.+|+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~------------------- 133 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQ------------------- 133 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCc-------------------
Confidence 579999999999999999999999987777777666554 221110000 00111221
Q ss_pred ceEEEeccCH--hhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee
Q 043305 603 MICVMGRSSP--SDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM 651 (892)
Q Consensus 603 ~~~V~aR~sP--~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm 651 (892)
.-.+.-..+| .||...|+.|++..+.+-++|||+.|..|-|.+|+=+|-
T Consensus 134 h~i~~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 134 HSIKYTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred eeeecCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 1112222222 589999999999999999999999999999999998863
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.018 Score=59.55 Aligned_cols=94 Identities=20% Similarity=0.133 Sum_probs=67.1
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceE
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMIC 605 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~ 605 (892)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+...-. .++.+.+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~-----~~~~~~~--------------------- 157 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP-----VQIWMED--------------------- 157 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC-----EEEeecC---------------------
Confidence 34567778999999999999999999999999999999999863211 1222111
Q ss_pred EEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcC
Q 043305 606 VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEA 645 (892)
Q Consensus 606 V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~A 645 (892)
+..+-.|+--..+.+.+.-..+.+.|+||+.+|..|-+.|
T Consensus 158 ~~~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 158 CPPKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CCCCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 1113345544555555554566799999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.038 Score=55.35 Aligned_cols=102 Identities=22% Similarity=0.267 Sum_probs=68.7
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHH---HHHHHc---C--CCCCcCCCCCCceec-chhhhhcCHHHHHHH
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTAR---AIALEC---G--ILTSEADATEPNIIE-GKSFRALSETQREEI 596 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~---aIA~~~---G--I~~~~~~~~~~~vi~-G~~~~~l~~~e~~~i 596 (892)
+|.+.|+++++++++++.|+++.++||.....+. ....++ | +.. ..++.. |..+..+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~------g~li~~~g~~~~~~~------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH------GPVLLSPDRLFAALH------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC------ceEEEcCCcchhhhh-------
Confidence 5788999999999999999999999999998884 444452 2 321 112222 22111111
Q ss_pred hcccccceEEEeccCHh-hHHHHHHHHHH-----cCCeEEEeCCCCCChHhhhcCCee
Q 043305 597 AGEDFGMICVMGRSSPS-DKLLLVQALRK-----RGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 597 ~~~~~~~~~V~aR~sP~-dK~~lV~~Lq~-----~g~vVa~tGDG~NDapALk~AdVG 648 (892)
+ .+. ...|+ .|...++.+++ ....++..||+.+|+.+-++++|-
T Consensus 92 ------~-e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 ------R-EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ------c-ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 1 122 22344 48888888877 357888999999999999987653
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.023 Score=62.70 Aligned_cols=107 Identities=12% Similarity=0.010 Sum_probs=75.6
Q ss_pred ecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCC-CcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 525 IKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILT-SEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 525 i~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~-~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
..+++.+++.++++.+++.|+++.++||....++..+.+.+|+.. .-. .+.|.+- ..+.. +
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~------~i~~~~~--------~~~~~----~ 245 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD------DLIGRPP--------DMHFQ----R 245 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh------hhhCCcc--------hhhhc----c
Confidence 578999999999999999999999999999999999999998863 110 1111110 00000 0
Q ss_pred eEEEeccCHhhHHHHHHHHHH-cCCeEEEeCCCCCChHhhhcCCeeE
Q 043305 604 ICVMGRSSPSDKLLLVQALRK-RGDVVAVTGDGTNDAPALHEADIGL 649 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~-~g~vVa~tGDG~NDapALk~AdVGI 649 (892)
-.---+-.|+-+...++.+-. .-+.+.|+||..+|+.+-+.|++-.
T Consensus 246 ~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 246 EQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 000024456677777666533 2378999999999999999998864
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.087 Score=53.74 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=69.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHH---------------HHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHH
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQ---------------TARAIALECGILTSEADATEPNIIEGKSFRALSETQ 592 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~---------------TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e 592 (892)
.+.||+.+++++|++.|+++.++|..+.. ....+-+..|+.-. .++...... .
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-------~i~~~~~~~---~-- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-------GIYYCPHHP---E-- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-------eEEECCCCC---C--
Confidence 35799999999999999999999987621 11122233444210 000000000 0
Q ss_pred HHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecC-CCcH---hhhhcc--cEE
Q 043305 593 REEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGI-QGTE---VAKESS--DII 666 (892)
Q Consensus 593 ~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi-~gt~---vAkeaa--Dii 666 (892)
...-..+-.|+--..+.+.+.-..+.+.|+||..+|..+-+.|++- +++. .|.. .....+ |.+
T Consensus 97 ----------~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~-~i~v~~g~~~~~~~~~~~~~~~i 165 (181)
T PRK08942 97 ----------DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT-PVLVRTGKGVTTLAEGAAPGTWV 165 (181)
T ss_pred ----------CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe-EEEEcCCCCchhhhcccCCCcee
Confidence 0000012223333334444433457799999999999999999973 3332 2221 122335 777
Q ss_pred EcCCCchHHHHHH
Q 043305 667 ILDDNFASVVKVV 679 (892)
Q Consensus 667 l~ddnf~sIv~~i 679 (892)
+.+ +..+...+
T Consensus 166 i~~--l~el~~~l 176 (181)
T PRK08942 166 LDS--LADLPQAL 176 (181)
T ss_pred ecC--HHHHHHHH
Confidence 743 76666654
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.069 Score=62.86 Aligned_cols=122 Identities=16% Similarity=0.176 Sum_probs=81.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+...-. .++.+.+..
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~-----~i~~~d~v~--------------------- 383 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVT-----ETFSIEQIN--------------------- 383 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcc-----eeEecCCCC---------------------
Confidence 678999999999999999999999999999999999999864211 223222211
Q ss_pred eccCHhhHHHHHHHHHH-cCCeEEEeCCCCCChHhhhcCCee-EeecC-CCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRK-RGDVVAVTGDGTNDAPALHEADIG-LAMGI-QGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~-~g~vVa~tGDG~NDapALk~AdVG-IAmgi-~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
....|+ .+...+++ .-+.+.++||..+|..|-+.|++- |.+.- .+.+.....+|+++.+ ++.+...+.
T Consensus 384 ~~~kP~---~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 454 (459)
T PRK06698 384 SLNKSD---LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDD--LLELKGILS 454 (459)
T ss_pred CCCCcH---HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCC--HHHHHHHHH
Confidence 112232 12222222 235699999999999999999973 33321 1222223458888754 777766553
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.082 Score=50.78 Aligned_cols=91 Identities=21% Similarity=0.166 Sum_probs=62.3
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCC--------HHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDN--------IQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGE 599 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn--------~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~ 599 (892)
++.|++.++++.|+++|+++.++|+.. .....++.+.+|+.... ..+.+ ..
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~-~~-------------- 83 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV------LYACP-HC-------------- 83 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE------EEECC-CC--------------
Confidence 678999999999999999999999998 77788888888875210 11111 00
Q ss_pred cccceEEEeccCHhhHHHHHHHHH-HcCCeEEEeCC-CCCChHhhhcCCe
Q 043305 600 DFGMICVMGRSSPSDKLLLVQALR-KRGDVVAVTGD-GTNDAPALHEADI 647 (892)
Q Consensus 600 ~~~~~~V~aR~sP~dK~~lV~~Lq-~~g~vVa~tGD-G~NDapALk~AdV 647 (892)
.+-.|+-=..+.+.++ -..+.+.|+|| -.+|..+-+.|++
T Consensus 84 --------~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 84 --------RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --------CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 0112222223334442 33467999999 5899999998876
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.09 Score=55.24 Aligned_cols=115 Identities=16% Similarity=0.188 Sum_probs=72.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+... ..++.+.... .
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~------~~i~~~~~~~--------------------~ 136 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP------EVFVTAERVK--------------------R 136 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc------cEEEEHHHhc--------------------C
Confidence 5689999999999999999999999887777766667776321 1223222110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee-EeecCCCc-HhhhhcccEEEcC
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG-LAMGIQGT-EVAKESSDIIILD 669 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG-IAmgi~gt-~vAkeaaDiil~d 669 (892)
.+-.|+-=....+.+.-..+.+.|+||..+|..|=+.|++- +++. .+. ......+|+++.+
T Consensus 137 ~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 137 GKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHS 199 (218)
T ss_pred CCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecc
Confidence 11123222233333333357799999999999999999984 4443 221 2223457777653
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.069 Score=54.47 Aligned_cols=111 Identities=12% Similarity=0.057 Sum_probs=72.5
Q ss_pred EEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecC-CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHH
Q 043305 518 VLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGD-NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEI 596 (892)
Q Consensus 518 ~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGD-n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i 596 (892)
......+-+-+++||+.+.++.|+++|+++.++|+- ....+..+-..+|+....... .+.+.
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~-----------------~~~~~ 97 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV-----------------PMHSL 97 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc-----------------cHHHh
Confidence 345555556688999999999999999999999975 899999999999985211100 00000
Q ss_pred hcccccceEEEeccCHhhH--HHHHHHHHHc------CCeEEEeCCCCCChHhhhcCCeeEe
Q 043305 597 AGEDFGMICVMGRSSPSDK--LLLVQALRKR------GDVVAVTGDGTNDAPALHEADIGLA 650 (892)
Q Consensus 597 ~~~~~~~~~V~aR~sP~dK--~~lV~~Lq~~------g~vVa~tGDG~NDapALk~AdVGIA 650 (892)
+ ...+.+...+..| ..+.+.+.+. -+.+.++||...|+.+-++|++-..
T Consensus 98 F-----d~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 98 F-----DDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred c-----eeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 0 1112222111122 2334444432 3689999999999999999988654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.04 Score=56.81 Aligned_cols=94 Identities=14% Similarity=0.205 Sum_probs=64.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+++++|++.|+++.++|+-+...+..+.+..|+...-. .++.+.+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd-----~i~~s~~~---------------------- 144 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFD-----AVLSADAV---------------------- 144 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhh-----eeEehhhc----------------------
Confidence 578999999999999999999999999999999999999853211 12221111
Q ss_pred eccCHh--hHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 608 GRSSPS--DKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~--dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
.+..|. -=..+.+.+.-.-+.+.++||+.+|..+-+.|++-
T Consensus 145 ~~~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 145 RAYKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CCCCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 011232 11222233322346789999999999999988764
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.18 Score=52.49 Aligned_cols=145 Identities=19% Similarity=0.232 Sum_probs=93.1
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCC-----CCCceecchh---h------hhcCHHHHH
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADA-----TEPNIIEGKS---F------RALSETQRE 594 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~-----~~~~vi~G~~---~------~~l~~~e~~ 594 (892)
+-||+.++++.+++. ....++|--...-+.++|+-+|+....... +...+-++.. + ..++.+|+-
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 468899999888764 456667777888999999999996432210 0001111110 0 012233333
Q ss_pred HHhcccccceEEEeccCHhh---------------HHHHHHHHHHc---CCeEEEeCCCCCChHhhhcCC-e-eEeecCC
Q 043305 595 EIAGEDFGMICVMGRSSPSD---------------KLLLVQALRKR---GDVVAVTGDGTNDAPALHEAD-I-GLAMGIQ 654 (892)
Q Consensus 595 ~i~~~~~~~~~V~aR~sP~d---------------K~~lV~~Lq~~---g~vVa~tGDG~NDapALk~Ad-V-GIAmgi~ 654 (892)
+.++ .+|.|.+|.. |.++++.+.+. ....+++||++.|..||+.+. - |+|+.-+
T Consensus 163 e~lD------e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFN 236 (315)
T COG4030 163 EKLD------ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFN 236 (315)
T ss_pred HHHH------HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEec
Confidence 3333 2455655654 44555554443 345688999999999999874 2 3666668
Q ss_pred CcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 655 GTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 655 gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
|.+-|-.-||+.+...+..+...+|.
T Consensus 237 GNeYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 237 GNEYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred CCcccccccceEEeccchhhhhHHHH
Confidence 99999999999999888888777773
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.1 Score=54.59 Aligned_cols=93 Identities=16% Similarity=0.220 Sum_probs=64.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.++++.|++.|+++.++|+-+...+....+.+|+...-. .++.+.+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~-----~i~~~~~~---------------------- 146 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFD-----AVITSEEE---------------------- 146 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhcc-----EEEEeccC----------------------
Confidence 578999999999999999999999998888888888888853211 12222111
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCCC-CChHhhhcCCee
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDGT-NDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~-NDapALk~AdVG 648 (892)
.+..|.. ..+.+.+++. .+.+.++||.. +|..+=+.|++-
T Consensus 147 ~~~KP~~-~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 147 GVEKPHP-KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CCCCCCH-HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 1222321 1233344443 45799999998 999999999874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.042 Score=55.71 Aligned_cols=91 Identities=12% Similarity=0.198 Sum_probs=59.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.++++.|+++|+++.++|+.. .+..+.+..|+...-. .++.+.+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~-----~~~~~~~~---------------------- 137 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFD-----AIVDPAEI---------------------- 137 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCc-----EEEehhhc----------------------
Confidence 578999999999999999999999743 2456677788753211 22222111
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCCCCChHhhhcCCee
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~NDapALk~AdVG 648 (892)
.+..|. ...+-+.+++. .+.+.|+||..+|..+-+.|++-
T Consensus 138 ~~~kp~-p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 138 KKGKPD-PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred CCCCCC-hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 112231 22223334433 35689999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.12 Score=59.11 Aligned_cols=120 Identities=13% Similarity=0.176 Sum_probs=79.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+++|+++.++|+-....+..+-+..||...-. .++.+.+.. .
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd-----~Iv~sddv~--------------------~ 270 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS-----VIVAAEDVY--------------------R 270 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce-----EEEecCcCC--------------------C
Confidence 467999999999999999999999999999999999999864211 222222211 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCc-Hhh-hhcccEEEcCCCchHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGT-EVA-KESSDIIILDDNFASV 675 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt-~vA-keaaDiil~ddnf~sI 675 (892)
..-.|+-=...++.+.-..+.+.|+||..+|+.|-+.|++-. +|..+. ... ...+|+++.+ +..+
T Consensus 271 ~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~-IgV~~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 271 GKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKC-VAVASKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE-EEECCCCChhHhcCCCEEECC--HHHH
Confidence 111222223334444434678999999999999999999853 343332 222 2348888754 5544
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.38 Score=54.97 Aligned_cols=62 Identities=19% Similarity=0.211 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHHc-C-----C-eEEEeCCCCCChHhhhc-----CCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 613 SDKLLLVQALRKR-G-----D-VVAVTGDGTNDAPALHE-----ADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 613 ~dK~~lV~~Lq~~-g-----~-vVa~tGDG~NDapALk~-----AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
-+|...|+.|.+. | . .+.++||+.||-.|++. +++||+|| +|... -.|++-|.+ -..+...+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHH
Confidence 4999999888764 2 2 25899999999999995 69999999 44432 256787765 55555444
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.2 Score=55.24 Aligned_cols=119 Identities=16% Similarity=0.118 Sum_probs=72.5
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+-+......+-+..++..... ...++.+.+.. .
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~~~--------------------~ 200 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQ---GLDVFAGDDVP--------------------K 200 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccC---ceEEEeccccC--------------------C
Confidence 578999999999999999999999998888877666553221100 00111221110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcH--hhhhcccEEEcC
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTE--VAKESSDIIILD 669 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~--vAkeaaDiil~d 669 (892)
.+-.|+-=..+.+.+.-..+.+.|+||+.+|..|-++|++....-..|.. .....+|+++.+
T Consensus 201 ~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 201 KKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred CCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 11222222333333433356799999999999999999987554323321 112357888743
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.15 Score=53.18 Aligned_cols=121 Identities=10% Similarity=0.066 Sum_probs=74.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++||+.+.++.|++. +++.++|+-....+..+.++.|+...-+ .++.+.+.. .
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd-----~i~~~~~~~--------------------~ 150 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFD-----DIFVSEDAG--------------------I 150 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcC-----EEEEcCccC--------------------C
Confidence 5789999999999999 9999999999999999999999864211 111111100 0
Q ss_pred eccCHhhHHHHHHHH-HHcCCeEEEeCCCC-CChHhhhcCCe---eEeecCCCcHhhhhcccEEEcCCCchHHHH
Q 043305 608 GRSSPSDKLLLVQAL-RKRGDVVAVTGDGT-NDAPALHEADI---GLAMGIQGTEVAKESSDIIILDDNFASVVK 677 (892)
Q Consensus 608 aR~sP~dK~~lV~~L-q~~g~vVa~tGDG~-NDapALk~AdV---GIAmgi~gt~vAkeaaDiil~ddnf~sIv~ 677 (892)
.+-.|+-=...++.+ .-..+.+.++||.. +|..+=+.+++ ++.-| ..++.....+|.++.+ ++.+..
T Consensus 151 ~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~-~~~~~~~~~~~~~~~~--~~el~~ 222 (224)
T TIGR02254 151 QKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPD-MHPNPDDIIPTYEIRS--LEELYE 222 (224)
T ss_pred CCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCC-CCCCCCCCCCceEECC--HHHHHh
Confidence 011121112223333 22235699999998 89999999996 33333 1222223456777643 655544
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.11 Score=52.38 Aligned_cols=94 Identities=18% Similarity=0.213 Sum_probs=61.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|+++|+++.++|+-.... ..+..++|+...-. .++.+.+.. .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~-----~i~~~~~~~--------------------~ 138 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFD-----VVIFSGDVG--------------------R 138 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCC-----EEEEcCCCC--------------------C
Confidence 678999999999999999999999988877 55555588753211 122221110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI 647 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV 647 (892)
..-.|+-=..+.+.+.-..+.+.++||...|..+-+++++
T Consensus 139 ~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 139 GKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 1112222233333333335678999999999999888876
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.078 Score=53.72 Aligned_cols=91 Identities=14% Similarity=0.196 Sum_probs=60.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+- ..+..+-+.+|+...-. .++.+...
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~-----~v~~~~~~---------------------- 138 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFD-----AIVDADEV---------------------- 138 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCC-----EeeehhhC----------------------
Confidence 68999999999999999999999986 66777778888753211 11111110
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCCCCChHhhhcCCee
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~NDapALk~AdVG 648 (892)
.+..|... .+-+.+++. .+.+.++||+.+|..+=++|++-
T Consensus 139 ~~~kp~~~-~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 139 KEGKPHPE-TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred CCCCCChH-HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 01223211 122333333 35688999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.13 Score=52.22 Aligned_cols=95 Identities=15% Similarity=0.025 Sum_probs=57.5
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHH--------HHHHHHHHcCCCCCcCCCCCCceec----chhhhhcCHHHHHHH
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQ--------TARAIALECGILTSEADATEPNIIE----GKSFRALSETQREEI 596 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~--------TA~aIA~~~GI~~~~~~~~~~~vi~----G~~~~~l~~~e~~~i 596 (892)
+-||+++.++.|++.|+++.++|+.... .....-+..|+.. .+.. +.+.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~--------~~~~~~~~~~~~----------- 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDD--------IYLCPHKHGDGC----------- 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCE--------EEECcCCCCCCC-----------
Confidence 6899999999999999999999987631 1222233444431 0000 0000
Q ss_pred hcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee
Q 043305 597 AGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM 651 (892)
Q Consensus 597 ~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm 651 (892)
-..+-.|+-=..+.+.+.-.-+.+.|+||..+|..|=++|++-...
T Consensus 90 ---------~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 90 ---------ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred ---------CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 0012223222333333333346799999999999999999876543
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.14 Score=51.81 Aligned_cols=84 Identities=24% Similarity=0.254 Sum_probs=59.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCC-HHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDN-IQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn-~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
.+-|++.++++.|++.|+++.++|+-+ ...+..+.+.+|+...
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~------------------------------------ 86 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL------------------------------------ 86 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE------------------------------------
Confidence 568999999999999999999999988 6777888888876410
Q ss_pred EeccCHhhHHHHHHHHHH---cCCeEEEeCCCC-CChHhhhcCCee
Q 043305 607 MGRSSPSDKLLLVQALRK---RGDVVAVTGDGT-NDAPALHEADIG 648 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~---~g~vVa~tGDG~-NDapALk~AdVG 648 (892)
.....|.. ..+-..+++ ..+.+.|+||.. .|..+=+.|++-
T Consensus 87 ~~~~KP~p-~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 87 PHAVKPPG-CAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred cCCCCCCh-HHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 00112211 122233333 245699999998 799999999873
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.28 Score=51.47 Aligned_cols=121 Identities=17% Similarity=0.208 Sum_probs=75.5
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+ +|+++.++|......+...-+..|+...-. .++.+.+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd-----~v~~~~~~---------------------- 146 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFD-----LLVISEQV---------------------- 146 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcC-----EEEEECcc----------------------
Confidence 46899999999999 689999999998888888888888753111 11111110
Q ss_pred eccCHhhHHHHHHHHHHcC----CeEEEeCCCC-CChHhhhcCCeeE-eecCCCcH-hhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRG----DVVAVTGDGT-NDAPALHEADIGL-AMGIQGTE-VAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g----~vVa~tGDG~-NDapALk~AdVGI-Amgi~gt~-vAkeaaDiil~ddnf~sIv~~i 679 (892)
....| +..-+-+.+++.| +.+.++||.. +|..+=+.|++-. .....+.. .....+|+++.+ +..+...+
T Consensus 147 ~~~KP-~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 147 GVAKP-DVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred CCCCC-CHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 01123 2222333344332 5799999998 7999999999753 32211211 112247887754 77776554
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.13 Score=54.59 Aligned_cols=96 Identities=9% Similarity=0.049 Sum_probs=65.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|.-+...+...-+..|+...-. .++.+.++
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd-----~iv~s~~~---------------------- 145 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLD-----LLLSTHTF---------------------- 145 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCC-----EEEEeeeC----------------------
Confidence 578999999999999999999999998888888878788753211 12211111
Q ss_pred eccCH--hhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEe
Q 043305 608 GRSSP--SDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLA 650 (892)
Q Consensus 608 aR~sP--~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIA 650 (892)
.+..| +-=..+.+.+.-..+.+.++||..+|..+=+.|++...
T Consensus 146 ~~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~ 190 (224)
T PRK14988 146 GYPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYC 190 (224)
T ss_pred CCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEE
Confidence 11223 21122222222234679999999999999999999643
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.45 Score=49.56 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=32.7
Q ss_pred hHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCC
Q 043305 532 SVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL 568 (892)
Q Consensus 532 ~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~ 568 (892)
.+.+.+..++++|++|+.+|.-....-...=+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4567899999999999999998888888888889887
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.073 Score=52.62 Aligned_cols=92 Identities=13% Similarity=-0.018 Sum_probs=64.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++|||+.+.++.|+ .++++.++|.-+...+..+-+.+|+...- ...++.+.+..
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~----f~~i~~~~d~~--------------------- 98 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF----GYRRLFRDECV--------------------- 98 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE----eeeEEECcccc---------------------
Confidence 57999999999999 57999999999999999999998874210 01122222111
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCCCCChHhhhcCCeeEe
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDGTNDAPALHEADIGLA 650 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~NDapALk~AdVGIA 650 (892)
+..|. +.+.++.. .+.+.++||..+|..|-++|.|-|.
T Consensus 99 -~~KP~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 99 -FVKGK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred -ccCCe----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 11222 44444443 4689999999999999888866653
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.094 Score=51.81 Aligned_cols=97 Identities=16% Similarity=0.229 Sum_probs=67.3
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
.++.|++.+.++.|++.|+++.++|+-.........+..|+...-. .++.+.+...
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~-----~i~~~~~~~~------------------- 131 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFD-----EIISSDDVGS------------------- 131 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCS-----EEEEGGGSSS-------------------
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccc-----cccccchhhh-------------------
Confidence 3678999999999999999999999999999999999999873211 1222211110
Q ss_pred EeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
.+-.|+-=..+++.+.-..+.+.++||+..|..+-++|++-
T Consensus 132 -~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 132 -RKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp -STTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred -hhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 01112222333333433457899999999999999998764
|
... |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.21 Score=57.34 Aligned_cols=117 Identities=18% Similarity=0.118 Sum_probs=71.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHH-HcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIAL-ECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~-~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+...- ..++.+.+..
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F-----d~ii~~d~v~-------------------- 147 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF-----SVIVGGDEVE-------------------- 147 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC-----CEEEehhhcC--------------------
Confidence 467999999999999999999999998888777655 56774321 1222222110
Q ss_pred EeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCC--cHhhhhcccEEEcC
Q 043305 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQG--TEVAKESSDIIILD 669 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~g--t~vAkeaaDiil~d 669 (892)
...-.|+-=...++.+.-..+.+.++||+.+|..|-+.|++....=..+ .+.....+|.++.+
T Consensus 148 ~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 148 KGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred CCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 0111222222233333323567999999999999999999863221122 12233456666543
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.4 Score=60.51 Aligned_cols=51 Identities=18% Similarity=0.115 Sum_probs=38.2
Q ss_pred CCcEEEEEEEecCCCchhHHHHHHHH-HhCCCEEEEEecCCHHHHHHHHHHc
Q 043305 515 DDLVLLAIVGIKDPCRPSVKDAIRLC-RIAGVKVRMVTGDNIQTARAIALEC 565 (892)
Q Consensus 515 ~~l~~lGlvgi~DplR~~v~~aI~~l-~~AGI~v~mvTGDn~~TA~aIA~~~ 565 (892)
-|.||+-.....-.+-+++.+++++| ++.|+.|.++||....+....-..+
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 34455533323335668999999996 8889999999999999998877554
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.42 Score=52.12 Aligned_cols=87 Identities=16% Similarity=0.136 Sum_probs=60.1
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHH---HHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhccccc
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQT---ARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFG 602 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~T---A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~ 602 (892)
..++-||+.+.++.+++.|+++.++|+..... +...-+..|+.....
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~------------------------------ 165 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE------------------------------ 165 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc------------------------------
Confidence 34678999999999999999999999977433 345556678753211
Q ss_pred ceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhh
Q 043305 603 MICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALH 643 (892)
Q Consensus 603 ~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk 643 (892)
-.++.|-....|..-.+.+.+.-.+|+++||-.+|.....
T Consensus 166 -d~lllr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 166 -EHLLLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred -ceEEeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 1233332223455556666666678999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.24 Score=52.17 Aligned_cols=97 Identities=14% Similarity=0.243 Sum_probs=57.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHH-HHHHcCCCCCcCCCCCCceecch--hhhhcCHHHHHHHhcccccce
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARA-IALECGILTSEADATEPNIIEGK--SFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~a-IA~~~GI~~~~~~~~~~~vi~G~--~~~~l~~~e~~~i~~~~~~~~ 604 (892)
++.||+.+.++.|++.|+++.++||-....... ..+..|+.... ..++.+. +..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f-----~~i~~~~~~~~~------------------ 134 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM-----HHVVTGDDPEVK------------------ 134 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC-----CEEEECChhhcc------------------
Confidence 568999999999999999999999877654332 21112332100 0111111 000
Q ss_pred EEEeccCHhhHHHHHHHHH---HcCCeEEEeCCCCCChHhhhcCCeeE
Q 043305 605 CVMGRSSPSDKLLLVQALR---KRGDVVAVTGDGTNDAPALHEADIGL 649 (892)
Q Consensus 605 ~V~aR~sP~dK~~lV~~Lq---~~g~vVa~tGDG~NDapALk~AdVGI 649 (892)
...-.|+-=...++.+. -..+.+.|+||...|+.|-+.|++-.
T Consensus 135 --~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 135 --QGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred --CCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 00112222223333332 12367999999999999999999854
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.29 Score=52.24 Aligned_cols=112 Identities=21% Similarity=0.280 Sum_probs=73.9
Q ss_pred CCchhHHHHHHHH--HhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC-CCCCceecchhhhhcCHHHHHHHhcccccce
Q 043305 528 PCRPSVKDAIRLC--RIAGVKVRMVTGDNIQTARAIALECGILTSEAD-ATEPNIIEGKSFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 528 plR~~v~~aI~~l--~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~-~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~ 604 (892)
|+.|+.+++++.| ++.|+.+.++|--|..--..|=+.-|+...-.. ..+...++..-. -.+.+.+ .
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~--------l~v~pyh--~- 139 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGR--------LRVRPYH--S- 139 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCce--------EEEeCcc--C-
Confidence 7789999999999 568999999999999999999999998642110 001111111100 0011110 1
Q ss_pred EEEeccCH-hhHHHHHHHHHHc----C---CeEEEeCCCCCChH-hh--hcCCeeEe
Q 043305 605 CVMGRSSP-SDKLLLVQALRKR----G---DVVAVTGDGTNDAP-AL--HEADIGLA 650 (892)
Q Consensus 605 ~V~aR~sP-~dK~~lV~~Lq~~----g---~vVa~tGDG~NDap-AL--k~AdVGIA 650 (892)
+-+.+|.| .=|..+++.+++. | ..|.++|||.||-. ++ +.+|+-++
T Consensus 140 h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~ 196 (234)
T PF06888_consen 140 HGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFP 196 (234)
T ss_pred CCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEec
Confidence 22446655 4799999988875 4 68999999999965 43 35666553
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.94 E-value=0.17 Score=54.35 Aligned_cols=69 Identities=19% Similarity=0.166 Sum_probs=51.0
Q ss_pred EEeccCHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcC--------CeeEeecCCCcHhhhhcccEEEcCCCch
Q 043305 606 VMGRSSPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEA--------DIGLAMGIQGTEVAKESSDIIILDDNFA 673 (892)
Q Consensus 606 V~aR~sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~A--------dVGIAmgi~gt~vAkeaaDiil~ddnf~ 673 (892)
+-.+..+.+|...++.+.+. ...++++||+.||.+|++.+ ..|++|+ .| ..+..|++++.+ ..
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~~--~~ 233 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLTG--PQ 233 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCCC--HH
Confidence 34455677999888887664 35799999999999999999 5888885 33 245678898864 66
Q ss_pred HHHHHH
Q 043305 674 SVVKVV 679 (892)
Q Consensus 674 sIv~~i 679 (892)
.+...+
T Consensus 234 ~v~~~L 239 (244)
T TIGR00685 234 QVLEFL 239 (244)
T ss_pred HHHHHH
Confidence 665555
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.93 Score=48.51 Aligned_cols=46 Identities=13% Similarity=0.025 Sum_probs=35.9
Q ss_pred EecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHH--HHHHHcCCCC
Q 043305 524 GIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTAR--AIALECGILT 569 (892)
Q Consensus 524 gi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~--aIA~~~GI~~ 569 (892)
.-.+.+-|++.++++.|+++|+++.++|.-....+. ...++.|+..
T Consensus 20 ~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~ 67 (242)
T TIGR01459 20 IDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINA 67 (242)
T ss_pred ccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCc
Confidence 335677899999999999999999999995544433 4567788863
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.53 Score=47.81 Aligned_cols=26 Identities=27% Similarity=0.307 Sum_probs=23.9
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDN 554 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn 554 (892)
+.||+.++++.|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999999999999999765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.41 Score=47.11 Aligned_cols=96 Identities=21% Similarity=0.223 Sum_probs=58.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCH---------------HHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHH
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNI---------------QTARAIALECGILTSEADATEPNIIEGKSFRALSETQ 592 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~---------------~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e 592 (892)
++.||+.++++.|++.|+++.++|.... ..+..+.+.+|+.... ... .....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~-~~~~~------ 93 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG------VLF-CPHHP------ 93 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE------EEE-CCCCC------
Confidence 4689999999999999999999998662 3455666777775210 000 00000
Q ss_pred HHHHhcccccceEEEeccCHhhHHHHHHHHHHc---CCeEEEeCCCCCChHhhhcCCee
Q 043305 593 REEIAGEDFGMICVMGRSSPSDKLLLVQALRKR---GDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 593 ~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~NDapALk~AdVG 648 (892)
.-..-. ..|. ...+-..+++. .+.+.++||...|..+-+.|++-
T Consensus 94 ----------~~~~~~-~KP~-~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 94 ----------ADNCSC-RKPK-PGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ----------CCCCCC-CCCC-HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 000000 1232 11223333333 36799999999999998888764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=92.09 E-value=0.39 Score=46.31 Aligned_cols=39 Identities=8% Similarity=0.103 Sum_probs=34.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecC-CHHHHHHHHHHcC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGD-NIQTARAIALECG 566 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGD-n~~TA~aIA~~~G 566 (892)
++.+|+.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777767666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=91.82 E-value=0.74 Score=46.64 Aligned_cols=81 Identities=17% Similarity=0.167 Sum_probs=60.5
Q ss_pred cCCCchhHHHHHHHHHhCCC--EEEEEecC-------CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHH
Q 043305 526 KDPCRPSVKDAIRLCRIAGV--KVRMVTGD-------NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEI 596 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI--~v~mvTGD-------n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i 596 (892)
++.+-|++.+.+++|++.+. +|.++|-- +...|.++++.+||.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp---------------------------- 108 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP---------------------------- 108 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc----------------------------
Confidence 45678999999999999987 49999986 488999999999974
Q ss_pred hcccccceEEEeccCHhhHHHHHHHHHHc-----CCeEEEeCCC-CCChHh
Q 043305 597 AGEDFGMICVMGRSSPSDKLLLVQALRKR-----GDVVAVTGDG-TNDAPA 641 (892)
Q Consensus 597 ~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~-----g~vVa~tGDG-~NDapA 641 (892)
+-.+....|.-..++.+.++.+ -+.++|+||- ..|.-+
T Consensus 109 -------vl~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 109 -------VLRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred -------EEEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 1122334576666778888765 5679999996 335433
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.62 E-value=0.85 Score=48.54 Aligned_cols=87 Identities=16% Similarity=0.173 Sum_probs=56.1
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHH---HHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTAR---AIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~---aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
-|.-|++.++++.+++.|++|+++||....... .--++.|+..- ..+++.+..-.
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-----~~LiLR~~~d~----------------- 176 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-----KHLILRGLEDS----------------- 176 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-----CeeeecCCCCC-----------------
Confidence 478899999999999999999999999976522 22244565421 11222221000
Q ss_pred eEEEeccCHhhHHHHHHHHHHcC-CeEEEeCCCCCCh
Q 043305 604 ICVMGRSSPSDKLLLVQALRKRG-DVVAVTGDGTNDA 639 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~~g-~vVa~tGDG~NDa 639 (892)
....-.-|...-+.+.+.| .+++.+||-.+|.
T Consensus 177 ----~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 177 ----NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred ----CchHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 0001122667776777665 5788899999887
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=91.29 E-value=0.49 Score=48.80 Aligned_cols=91 Identities=16% Similarity=0.231 Sum_probs=58.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++-||+.++++.|+++|+++.++|+-.. ....+.+.+|+...-. .++.+.+.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l~~~fd-----~i~~s~~~---------------------- 156 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGLLEYFD-----FVVTSYEV---------------------- 156 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCcHHhcc-----eEEeeccc----------------------
Confidence 5679999999999999999999997554 3466777777742211 11111110
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCCC-CChHhhhcCCe
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDGT-NDAPALHEADI 647 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~-NDapALk~AdV 647 (892)
....|. ...+-+.+++. .+.+.++||+. +|..+=++|++
T Consensus 157 ~~~KP~-~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 157 GAEKPD-PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred CCCCCC-HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 011121 12233334443 46799999997 89998888865
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=91.18 E-value=0.5 Score=46.40 Aligned_cols=38 Identities=11% Similarity=0.282 Sum_probs=33.3
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALEC 565 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~ 565 (892)
+..+|+.+.++.|++.|+++.++|+-....+....+..
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 34579999999999999999999999999888877765
|
HAD subfamilies caused by an overly broad single model. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.12 E-value=0.48 Score=53.74 Aligned_cols=97 Identities=24% Similarity=0.175 Sum_probs=58.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecC---------------CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHH
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGD---------------NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQ 592 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGD---------------n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e 592 (892)
++.|++.++++.|+++|+++.++|.- ....+..+.+..|+.-. ...+... .. ++
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd------~i~i~~~-~~--sd-- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD------EVLICPH-FP--ED-- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee------eEEEeCC-cC--cc--
Confidence 67999999999999999999999982 13345556666666310 0111100 00 00
Q ss_pred HHHHhcccccceEEEeccCHhhHHHHHHHH-HHc---CCeEEEeCCCCCChHhhhcCCeeEe
Q 043305 593 REEIAGEDFGMICVMGRSSPSDKLLLVQAL-RKR---GDVVAVTGDGTNDAPALHEADIGLA 650 (892)
Q Consensus 593 ~~~i~~~~~~~~~V~aR~sP~dK~~lV~~L-q~~---g~vVa~tGDG~NDapALk~AdVGIA 650 (892)
...+| .|. -.++..+ ++. .+.+.|+||+.+|..+=+.|++-..
T Consensus 99 ------------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 ------------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred ------------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00011 222 2233333 222 3679999999999999999988643
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.59 E-value=2.8 Score=47.73 Aligned_cols=46 Identities=20% Similarity=0.187 Sum_probs=35.6
Q ss_pred CcEEEEEEEecC--CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHH
Q 043305 516 DLVLLAIVGIKD--PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIA 562 (892)
Q Consensus 516 ~l~~lGlvgi~D--plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA 562 (892)
|.||+-++.-.| .+-++..++|+++. .|++|.++||........+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 345554443222 36789999999999 78999999999999999884
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=90.00 E-value=0.63 Score=46.80 Aligned_cols=97 Identities=23% Similarity=0.193 Sum_probs=57.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecC---------------CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHH
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGD---------------NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQ 592 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGD---------------n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e 592 (892)
++-|++.+++++|++.|+++.++|-- ....+..+.++.|+.-. ..++ +..+. ++
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd------~ii~-~~~~~--~~-- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD------DVLI-CPHFP--DD-- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee------EEEE-CCCCC--CC--
Confidence 45789999999999999999999974 23455666666676410 0111 10000 00
Q ss_pred HHHHhcccccceEEEeccCHhhHHHHHH-HHHHc---CCeEEEeCCCCCChHhhhcCCeeEe
Q 043305 593 REEIAGEDFGMICVMGRSSPSDKLLLVQ-ALRKR---GDVVAVTGDGTNDAPALHEADIGLA 650 (892)
Q Consensus 593 ~~~i~~~~~~~~~V~aR~sP~dK~~lV~-~Lq~~---g~vVa~tGDG~NDapALk~AdVGIA 650 (892)
.+- ...|. ..++. .+++. .+.+.|+||+.+|..+-+.|++-..
T Consensus 98 ------------~~~-~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 ------------NCD-CRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------------CCC-CCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 000 01222 22222 22332 3569999999999999999987643
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.00 E-value=1.1 Score=45.20 Aligned_cols=40 Identities=13% Similarity=0.119 Sum_probs=31.7
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCH------------HHHHHHHHHcCCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNI------------QTARAIALECGIL 568 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~------------~TA~aIA~~~GI~ 568 (892)
+-||+.++++.|+++|+++.++|.-.. ..+..+.+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 348999999999999999999996443 2455677778874
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=89.69 E-value=0.85 Score=48.34 Aligned_cols=99 Identities=11% Similarity=0.107 Sum_probs=64.5
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcC---CCCCcCCCCCCceecchhhhhcCHHHHHHHhccccc
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECG---ILTSEADATEPNIIEGKSFRALSETQREEIAGEDFG 602 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~G---I~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~ 602 (892)
+-++.||+.+++++++++|+++.++|..+....+.+-+..+ +... +++ .+
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~---------f~~-------------~f----- 145 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY---------FSG-------------YF----- 145 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh---------cce-------------EE-----
Confidence 34789999999999999999999999998887777665542 2110 000 00
Q ss_pred ceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee
Q 043305 603 MICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM 651 (892)
Q Consensus 603 ~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm 651 (892)
...+...-.|+-=..+.+.+.-..+.+.++||...|+.|=++|++-...
T Consensus 146 d~~~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 146 DTTVGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred EeCcccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 0011122233333334444433346799999999999999999986543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=88.95 E-value=0.98 Score=50.60 Aligned_cols=90 Identities=9% Similarity=0.054 Sum_probs=65.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHH----cCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALE----CGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~----~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
++.+++.++++.|++.||++.++|.-+...|..+-+. .|+...-
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------------- 78 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------------- 78 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe--------------------------------
Confidence 4589999999999999999999999999999998887 6664210
Q ss_pred eEEEeccCHhhHHHHHHHH-HHc---CCeEEEeCCCCCChHhhhcCCeeEee
Q 043305 604 ICVMGRSSPSDKLLLVQAL-RKR---GDVVAVTGDGTNDAPALHEADIGLAM 651 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~L-q~~---g~vVa~tGDG~NDapALk~AdVGIAm 651 (892)
..+ +.++..|...++.+ ++. -+.+.++||...|..+.+.+..++.+
T Consensus 79 ~~~--~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 79 DAR--SINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred eEE--EEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 011 11122344334333 322 47899999999999999998887644
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=88.24 E-value=1.4 Score=57.28 Aligned_cols=120 Identities=18% Similarity=0.215 Sum_probs=76.4
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEe
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMG 608 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~a 608 (892)
+.||+.+.++.|+++|+++.++|+-....+..+-+..|+.... ...++.+.+... .
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~----Fd~iv~~~~~~~--------------------~ 217 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM----FDAIVSADAFEN--------------------L 217 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH----CCEEEECccccc--------------------C
Confidence 5689999999999999999999999999999888889985110 012222221110 1
Q ss_pred ccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee-Eee--cCCCcHhhhhcccEEEcCCCchH
Q 043305 609 RSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG-LAM--GIQGTEVAKESSDIIILDDNFAS 674 (892)
Q Consensus 609 R~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG-IAm--gi~gt~vAkeaaDiil~ddnf~s 674 (892)
.-.|+-=....+.+.-..+.+.++||..+|+.|-+.|++- |.+ |....+.....+|+++.+ +..
T Consensus 218 KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~--l~e 284 (1057)
T PLN02919 218 KPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD--IGN 284 (1057)
T ss_pred CCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC--hHH
Confidence 1122222233333333356799999999999999999873 222 211122344567888755 544
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.41 E-value=0.4 Score=50.25 Aligned_cols=97 Identities=10% Similarity=0.102 Sum_probs=61.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||++++++.| ++++.++|+.....+...-+..|+...-. ..++.+.+...
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~----~~v~~~~~~~~-------------------- 140 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP----DKLFSGYDIQR-------------------- 140 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc----ceEeeHHhcCC--------------------
Confidence 4568999999998 49999999999888888777888853210 12222221110
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM 651 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm 651 (892)
.+-.|+-=....+.+.-..+.++++||..+|..+=++|++....
T Consensus 141 ~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 141 WKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 01122222222333322235699999999999999999977643
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=87.39 E-value=0.74 Score=47.85 Aligned_cols=96 Identities=19% Similarity=0.171 Sum_probs=54.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHH--HHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQT--ARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMIC 605 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~T--A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~ 605 (892)
++.|++.+.++.|++.|+++.++|...... ........|+...-. .++.+.+.
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd-----~v~~s~~~-------------------- 148 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFD-----AVVESCLE-------------------- 148 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCC-----EEEEeeec--------------------
Confidence 678999999999999999999999865433 222222233321100 01100000
Q ss_pred EEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 606 VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 606 V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
-..+-.|+-=..+.+.+.-..+.+.|+||...|..+=++|++-
T Consensus 149 ~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 149 GLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 0011223222222333332346688899999999999999874
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=87.30 E-value=2.9 Score=44.99 Aligned_cols=39 Identities=31% Similarity=0.351 Sum_probs=32.9
Q ss_pred hhHHHHHHHHHHcCCeEEEeCC----CCCChHhhhc-CCeeEeec
Q 043305 613 SDKLLLVQALRKRGDVVAVTGD----GTNDAPALHE-ADIGLAMG 652 (892)
Q Consensus 613 ~dK~~lV~~Lq~~g~vVa~tGD----G~NDapALk~-AdVGIAmg 652 (892)
-+|..-++.|+ ..+.|++.|| |-||.+||+. -=+|+++-
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 47888888888 6778899999 8999999996 66777763
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.17 E-value=2.3 Score=42.79 Aligned_cols=108 Identities=17% Similarity=0.209 Sum_probs=74.3
Q ss_pred HHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHH
Q 043305 478 IEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQT 557 (892)
Q Consensus 478 i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~T 557 (892)
.+.+...|+|++.+- ++. |+++.= ....-|++++=+.+++.+|+++.++|--+...
T Consensus 20 ~~~L~~~Gikgvi~D---lDN-------------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~R 75 (175)
T COG2179 20 PDILKAHGIKGVILD---LDN-------------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESR 75 (175)
T ss_pred HHHHHHcCCcEEEEe---ccC-------------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHH
Confidence 467888999998763 332 111111 12457899999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHc---CCeEEEeCC
Q 043305 558 ARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKR---GDVVAVTGD 634 (892)
Q Consensus 558 A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~---g~vVa~tGD 634 (892)
+...+..+|+.- +.-. ..|.- ..+-+++++. -+.|+|+||
T Consensus 76 V~~~~~~l~v~f--------i~~A----------------------------~KP~~-~~fr~Al~~m~l~~~~vvmVGD 118 (175)
T COG2179 76 VARAAEKLGVPF--------IYRA----------------------------KKPFG-RAFRRALKEMNLPPEEVVMVGD 118 (175)
T ss_pred HHhhhhhcCCce--------eecc----------------------------cCccH-HHHHHHHHHcCCChhHEEEEcc
Confidence 999999999862 1111 11222 3456666665 478999999
Q ss_pred C-CCChHhhhcCC
Q 043305 635 G-TNDAPALHEAD 646 (892)
Q Consensus 635 G-~NDapALk~Ad 646 (892)
- ..|.-+=+.|+
T Consensus 119 qL~TDVlggnr~G 131 (175)
T COG2179 119 QLFTDVLGGNRAG 131 (175)
T ss_pred hhhhhhhcccccC
Confidence 7 44775555553
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=86.18 E-value=7.9 Score=41.91 Aligned_cols=40 Identities=28% Similarity=0.296 Sum_probs=33.0
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHH---HHHHHHHcCCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQT---ARAIALECGIL 568 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~T---A~aIA~~~GI~ 568 (892)
+=|++.++|++|+++|++++++||....+ .....+++|+.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 77899999999999999999999977665 44455567875
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=82.92 E-value=2.1 Score=47.81 Aligned_cols=43 Identities=19% Similarity=0.258 Sum_probs=36.1
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHH---HHcCCC
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIA---LECGIL 568 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA---~~~GI~ 568 (892)
.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+.
T Consensus 42 ~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 42 GDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 3455699999999999999999999999988877777 557764
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=81.23 E-value=4.2 Score=41.70 Aligned_cols=94 Identities=19% Similarity=0.157 Sum_probs=54.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.+ +...+|.-+..+....-+..|+...... -| ...+.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~----------~f-----------------~~i~~ 125 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPG----------AF-----------------SEVLM 125 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCC----------cc-----------------cEEEE
Confidence 46899999999999985 5666676444444434455565321000 00 01111
Q ss_pred eccCHhhHHHHHHHHHHcC-CeEEEeCCCCCChHhhhcC--CeeE
Q 043305 608 GRSSPSDKLLLVQALRKRG-DVVAVTGDGTNDAPALHEA--DIGL 649 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g-~vVa~tGDG~NDapALk~A--dVGI 649 (892)
++..+..+..+...+++.| +.++++||..+|..|-++| ++-.
T Consensus 126 ~~~~~~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 126 CGHDESKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred eccCcccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 2222111222333444444 4588999999999999999 8853
|
2 hypothetical protein; Provisional |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.44 E-value=3 Score=43.05 Aligned_cols=95 Identities=17% Similarity=0.140 Sum_probs=56.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHH-cCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALE-CGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~-~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
++.||+.++++.|+++|+++.++|.-+.......-.. .|+...- ..++...+
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f-----d~v~~s~~---------------------- 136 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA-----DHIYLSQD---------------------- 136 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc-----CEEEEecc----------------------
Confidence 4789999999999999999999998765544332211 2222100 01111110
Q ss_pred EeccCH--hhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeE
Q 043305 607 MGRSSP--SDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL 649 (892)
Q Consensus 607 ~aR~sP--~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGI 649 (892)
+....| +==..+.+.+.-..+.+.++||...|..+=++|++-.
T Consensus 137 ~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 137 LGMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 011122 2212223333323467899999999999999988753
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.22 E-value=14 Score=39.05 Aligned_cols=113 Identities=22% Similarity=0.261 Sum_probs=72.5
Q ss_pred CCchhHHHHHHHHHhCCC-EEEEEecCCHHHHHHHHHHcCCCCC-------cC--CCCCCceecchhhhhcCHHHHHHHh
Q 043305 528 PCRPSVKDAIRLCRIAGV-KVRMVTGDNIQTARAIALECGILTS-------EA--DATEPNIIEGKSFRALSETQREEIA 597 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI-~v~mvTGDn~~TA~aIA~~~GI~~~-------~~--~~~~~~vi~G~~~~~l~~~e~~~i~ 597 (892)
|.-|+..++|+.+++.|- .+++||--|..--..+-+..||..- .. +..+.+.+.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~---------------- 147 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVR---------------- 147 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEee----------------
Confidence 678999999999999996 9999999998888888877776420 00 001111110
Q ss_pred cccccceEEEeccCHh-hHHHHHHHHHHc-------CCeEEEeCCCCCC-hHhhhcCCeeEeecCCCcHh
Q 043305 598 GEDFGMICVMGRSSPS-DKLLLVQALRKR-------GDVVAVTGDGTND-APALHEADIGLAMGIQGTEV 658 (892)
Q Consensus 598 ~~~~~~~~V~aR~sP~-dK~~lV~~Lq~~-------g~vVa~tGDG~ND-apALk~AdVGIAmgi~gt~v 658 (892)
+ ++.-.-+.||.|. =|..++..++.. -+.+-.+|||.|| +|.++...--+||-..|-+.
T Consensus 148 p--yH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 148 P--YHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred c--CCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 1 1111233444332 367776666543 2479999999999 46776666666776566554
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.08 E-value=6.2 Score=40.55 Aligned_cols=101 Identities=25% Similarity=0.246 Sum_probs=65.6
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccc-cceEEE
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDF-GMICVM 607 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~-~~~~V~ 607 (892)
+.+++.+++..++++|++++|+|- +-||.+ -..++..|..+.+--+..+..+.. -....+
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~r--------gyf~~~~f~~~~~~m~~~l~~~gv~id~i~~ 92 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGR--------GYFTEADFDKLHNKMLKILASQGVKIDGILY 92 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCccc--------cCccHHHHHHHHHHHHHHHHHcCCccceEEE
Confidence 468999999999999999999994 445543 234455555544322222211110 012344
Q ss_pred eccCHhh--------HHHHHHHHHHcC---CeEEEeCCCCCChHhhhcCCee
Q 043305 608 GRSSPSD--------KLLLVQALRKRG---DVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~d--------K~~lV~~Lq~~g---~vVa~tGDG~NDapALk~AdVG 648 (892)
|.-.|++ ...+.+.+++.+ ....|+||-..|..+=..|+++
T Consensus 93 Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 93 CPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 5545543 456667777765 7889999999999988888877
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 892 | ||||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 5e-63 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 5e-63 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 5e-63 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 3e-62 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 5e-62 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 6e-62 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 4e-59 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-55 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-28 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 7e-27 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 3e-16 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-14 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 2e-14 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 4e-13 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 5e-13 | ||
| 4aqr_D | 57 | Crystal Structure Of A Calmodulin In Complex With T | 4e-12 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 7e-12 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 1e-11 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 2e-11 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 1e-06 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 5e-05 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 5e-05 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 5e-05 |
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|4AQR|D Chain D, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 57 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 892 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-173 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-172 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 6e-04 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-171 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-06 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-129 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 8e-04 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-122 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 3e-05 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 8e-33 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 6e-31 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-30 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 4e-30 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 9e-29 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-28 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 2e-22 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-07 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-06 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 527 bits (1361), Expect = e-173
Identities = 175/688 (25%), Positives = 293/688 (42%), Gaps = 76/688 (11%)
Query: 265 IKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDK 324
++ + + IVV VPEGL VT+ L+ + +++ + +V+ L A ET+GS + ICSDK
Sbjct: 328 LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDK 387
Query: 325 TGTLTLNQMTVVEAYVGGRKMNPTDSN-------SQLSPMVTSLLVEGI----AQNTTGS 373
TGTLT N+MTV + + + Q S +L A +G
Sbjct: 388 TGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQ 447
Query: 374 VYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQL 433
+P + V G +E A+L++ N R + PFNS K L
Sbjct: 448 DAVPV--PKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTL 505
Query: 434 PNSEVHIHW---KGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVA 490
+ H KGA E VL+ C+ I + + +DE F+ A + R +
Sbjct: 506 EDPRDPRHVLVMKGAPERVLERCS-SILIKGQELPLDEQWREAFQTAYLSLGGLGERVLG 564
Query: 491 IAYRTYERERIPDEEELSRWAL--PEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVR 548
+ P A+ P L +V + DP R +V DA+ CR AG++V
Sbjct: 565 FCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVI 624
Query: 549 MVTGDNIQTARAIALECGILTSEADATEPN-------------------IIEGKSFRALS 589
MVTGD+ TA+AIA GI++ ++ E +I G + +
Sbjct: 625 MVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMD 684
Query: 590 ETQ-REEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648
++ E + V R+SP KL++V++ ++ G +VAVTGDG ND+PAL +ADIG
Sbjct: 685 PSELVEALRTHP---EMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIG 741
Query: 649 LAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINF 708
+AMGI G++ AK ++D+I+LDDNFAS+V V GR ++ N++K I + LT N+ L
Sbjct: 742 VAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYL 801
Query: 709 VAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITN----- 763
+ S +PL + +L++ L D +++LA E +M P + + N
Sbjct: 802 IYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAA 861
Query: 764 --IMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKN--------------- 806
+ + + +G L N
Sbjct: 862 YSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQR 921
Query: 807 --------TLIFNSFVLCQIFNEFNARKPDEKNIFG-GITKNRLFMGIVAVTLVLQILII 857
T+ F S +CQI + + + F G +NR+ + + + + +
Sbjct: 922 LYQQYTCYTVFFISIEMCQIADVLIRKT-RRLSAFQQGFFRNRILVIAIVFQVCIGCFLC 980
Query: 858 Q--FLGKFASTTRLNWKHWIISVVIGFI 883
+ + + ++ W++ + G +
Sbjct: 981 YCPGMPNIFNFMPIRFQWWLVPMPFGLL 1008
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 527 bits (1359), Expect = e-172
Identities = 177/687 (25%), Positives = 298/687 (43%), Gaps = 75/687 (10%)
Query: 265 IKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDK 324
++ + + I+V VPEGL VT+ L + ++M LV+ L A ET+GS +TICSDK
Sbjct: 323 LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDK 382
Query: 325 TGTLTLNQMTVVEAYVGGRKMNPTDSN-------SQLSPMVTSLLVEGI----AQNTTGS 373
TGTLT N+MTV + + + + S ++L A G
Sbjct: 383 TGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQ 442
Query: 374 VYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQL 433
+P + V+G +E A+L+ + + +R + PFNS K +
Sbjct: 443 DNVPI--LKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHEN 500
Query: 434 PNSEVHIHW---KGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVA 490
S + KGA E +LD C+ I + + ED F+ A ++ R +
Sbjct: 501 EKSSESRYLLVMKGAPERILDRCS-TILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLG 559
Query: 491 IAYRTYERERIPD--EEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVR 548
+ ++ + + P DL + ++ + DP R +V DA+ CR AG+KV
Sbjct: 560 FCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVI 619
Query: 549 MVTGDNIQTARAIALECGILTSEADATEPN-------------------IIEGKSFRALS 589
MVTGD+ TA+AIA GI++ + E ++ G + LS
Sbjct: 620 MVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLS 679
Query: 590 ETQ-REEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648
+ + V R+SP KL++V+ +++G +VAVTGDG ND+PAL +ADIG
Sbjct: 680 TEVLDDILHYHT---EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG 736
Query: 649 LAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINF 708
+AMGI G++V+K+++D+I+LDDNFAS+V V GR ++ N++K I + LT N+ +
Sbjct: 737 VAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFL 796
Query: 709 VAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREP-LITNIMWR 767
V + + +PL V +L ++L D + A++LA E +M+R P + L+ +
Sbjct: 797 VFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLIS 856
Query: 768 NLLIQASYQVSVL------LVLNFQGKRILNLESDSNAHSNKVKN--------------- 806
Q ++ ++L G ++L ++ +
Sbjct: 857 MAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQR 916
Query: 807 --------TLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQ 858
T F S V+ Q + + +IF KN++ + + L +
Sbjct: 917 KIVEFTCHTSFFISIVVVQWADLIICKT-RRNSIFQQGMKNKILIFGLFEETALAAFLSY 975
Query: 859 --FLGKFASTTRLNWKHWIISVVIGFI 883
L W + I
Sbjct: 976 CPGTDVALRMYPLKPSWWFCAFPYSLI 1002
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 6e-04
Identities = 27/169 (15%), Positives = 47/169 (27%), Gaps = 51/169 (30%)
Query: 150 SLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLI 209
L + L + T+L +G+ + + G N+ W+ I
Sbjct: 50 KLSLDELHNKYGTDLTRGLTNARAK--EILARDGPNSLTPPPTTPEWIKFCRQLFGGFSI 107
Query: 210 ILMIAAAASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILT 269
+L I A F A + + + A L
Sbjct: 108 LLWIGAILC-------------------------------FLAYGIQAATEDEPANDNLY 136
Query: 270 VAVTIVVVAVPEGLPLAVTLTLAY-----------SMRKMMADKALVRR 307
+ V + V + VT +Y S + M+ +ALV R
Sbjct: 137 LGVVLSTVVI-------VTGCFSYYQEAKSSRIMDSFKNMVPQQALVIR 178
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 523 bits (1349), Expect = e-171
Identities = 191/701 (27%), Positives = 300/701 (42%), Gaps = 95/701 (13%)
Query: 263 GAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICS 322
GAI +AV + V A+PEGLP +T LA R+M A+VR L + ET+G + ICS
Sbjct: 292 GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICS 351
Query: 323 DKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYL------ 376
DKTGTLT NQM+V + ++ + S ++ S + G G V
Sbjct: 352 DKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFS-------ITGSTYAPEGEVLKNDKPIR 404
Query: 377 ------------------------PPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSEC 412
G E G TE A+ K+ + VR+
Sbjct: 405 SGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLS 464
Query: 413 SV----------------LHVFPFNSLKKRGGVAVQLPNSEVH-----IHWKGAAEIVLD 451
V F+ +K V S + KGA E V+D
Sbjct: 465 KVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVID 524
Query: 452 SCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSS--LRCVAIAYRTYERE-RIPDEEELS 508
C Y+ V M I++ + LRC+A+A R + ++ S
Sbjct: 525 RCN-YVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSS 583
Query: 509 RWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL 568
R+ E DL + +VG+ DP R V +I+LCR AG++V M+TGDN TA AI GI
Sbjct: 584 RFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 643
Query: 569 TSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDV 628
+ + G+ F L ++ E C R PS K +V+ L+ ++
Sbjct: 644 GENEEVADR-AYTGREFDDLPLAEQREACRR----ACCFARVEPSHKSKIVEYLQSYDEI 698
Query: 629 VAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYAN 688
A+TGDG NDAPAL +A+IG+AMG GT VAK +S++++ DDNF+++V V GR++Y N
Sbjct: 699 TAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNN 757
Query: 689 IQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHL 748
+++FI++ ++ NV +V F+ A L VQLLWVNL+ D L A AL PP +
Sbjct: 758 MKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 817
Query: 749 MQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVL------NFQGKRILNLESDSNAHSN 802
M R P +EPLI+ ++ + Y + + + + ++
Sbjct: 818 MDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQC 877
Query: 803 KVKN-----------------TLIFNSFVLCQIFNEFNARKPDEKNIFG-GITKNRLFMG 844
+ T+ + V ++ N N+ + +++ N +G
Sbjct: 878 TEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLS-ENQSLMRMPPWVNIWLLG 936
Query: 845 IVAVTLVLQILIIQ--FLGKFASTTRLNWKHWIISVVIGFI 883
+ +++ L LI+ L L+ W++ + I
Sbjct: 937 SICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLP 977
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 1e-06
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 160 LKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASL 219
+ G+ D V + +G N P ++G+S W + E ++DL + IL++AA S
Sbjct: 17 FGVSETTGLTPDQVK--RHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISF 74
Query: 220 ALGIKTEYLAGV 231
L E +
Sbjct: 75 VLAWFEEGEETI 86
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 410 bits (1055), Expect = e-129
Identities = 109/617 (17%), Positives = 227/617 (36%), Gaps = 60/617 (9%)
Query: 267 ILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTG 326
+ + +++ +P +P +++T+A ++ A+ +R++A E M +CSDKTG
Sbjct: 273 GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 332
Query: 327 TLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVS 386
TLTLN+++V + V V LL +A +
Sbjct: 333 TLTLNKLSVDKNLV------EVFCKGVEKDQV--LLFAAMASRVE--------------N 370
Query: 387 GSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAA 446
+ A++ R+ +H PFN + KR + + H KGA
Sbjct: 371 QDAIDAAMVGMLADPK----EARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAP 426
Query: 447 EIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE 506
E +L+ D I+ A LR +A+A + +
Sbjct: 427 EQILELAK-----------ASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPG- 474
Query: 507 LSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECG 566
+ ++ + DP R + IR GV V+M+TGD + + G
Sbjct: 475 --------APWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 526
Query: 567 ILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRG 626
+ T+ ++ ++ L+ EE+ + P K +V+ L++R
Sbjct: 527 MGTNMYPSSA--LLGTHKDANLASIPVEELIEK----ADGFAGVFPEHKYEIVKKLQERK 580
Query: 627 DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVY 686
+V +TGDG NDAPAL +ADIG+A+ T+ A+ +SDI++ + + ++ V R+++
Sbjct: 581 HIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIF 639
Query: 687 ANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTD 746
++ + + +++ + +V F+ + +A +L + ++ D + ++ +
Sbjct: 640 QRMKNYTIYAVSITI-RIVFGFMLIALIWEFDFSAFMVLIIAILND-GTIMTISKDRV-- 695
Query: 747 HLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKN 806
+ + + + A V + S +N
Sbjct: 696 KPSPTPDSWKLKEIFATGVVLGGYQ-AIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELM 754
Query: 807 TLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFAST 866
++ + F R F L + + L+ ++ + +FA
Sbjct: 755 GAVYLQVSIISQALIFVTRS--RSWSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKI 812
Query: 867 TRLNWKHWIISVVIGFI 883
+ W + + +
Sbjct: 813 RGIGWGWAGVIWLYSIV 829
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 8e-04
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 148 FSSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLT 207
+ ++ + LK + E G+ + + R FG N KK FL W +
Sbjct: 14 LEKIPIEEVFQQLKCSRE-GLTTQEGE--DRIQIFGPNKLEEKKESKLLKFLGFMW-NPL 69
Query: 208 LIILMIAAAASLALGI 223
++ +AA ++AL
Sbjct: 70 SWVMEMAAIMAIALAN 85
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 391 bits (1006), Expect = e-122
Identities = 118/619 (19%), Positives = 243/619 (39%), Gaps = 72/619 (11%)
Query: 265 IKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDK 324
++IL + I ++ VP GLP VT T+A + KA+V++LSA E++ +CSDK
Sbjct: 320 VQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDK 379
Query: 325 TGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAE 384
TGTLT N++++ + Y + D + L +
Sbjct: 380 TGTLTKNKLSLHDPYT----VAGVDPEDLMLTA-----------------CL--AASRKK 416
Query: 385 VSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKG 444
+KA L+ ++V S+ VL PF+ + K+ V+ P E KG
Sbjct: 417 KGIDAIDKAFLKSLKYYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKG 475
Query: 445 AAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDE 504
A VL + + E+ +K + + A+ R + +A +
Sbjct: 476 APLFVLKTVEEDHP-------IPEEVDQAYKNKVAEFATRGFRSLGVARKR--------- 519
Query: 505 EELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALE 564
E +L I+ DP R + + G+ ++M+TGD + AR + +
Sbjct: 520 --------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQ 571
Query: 565 CGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRK 624
G+ T+ +A + + ++ + P K +V+ L++
Sbjct: 572 LGLGTNIYNAER---LGLGGGGDMPGSEVYDFVEA----ADGFAEVFPQHKYNVVEILQQ 624
Query: 625 RGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRS 684
RG +VA+TGDG NDAP+L +AD G+A+ ++ A+ ++DI+ L +++ ++ R
Sbjct: 625 RGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQ 683
Query: 685 VYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPP 744
++ + ++ +++ +++ L I ++ + LN ++++ + D + LA+A +
Sbjct: 684 IFHRMYAYVVYRIALSI-HLEIFLGLWIAILNRSLNIELVVFIAIFAD-VATLAIAYDNA 741
Query: 745 TDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKV 804
P + + ++ A + + QG E+ +
Sbjct: 742 PYSQTPVKW---NLPKLWGMSVLLGVVLAVGTWITVTTMYAQG------ENGGIVQNFGN 792
Query: 805 KNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFA 864
+ ++F L + + F R F + G + + +L + +
Sbjct: 793 MDEVLFLQISLTENWLIFITR---ANGPFWSSIPSWQLSGAIFLVDILATCFTIW--GWF 847
Query: 865 STTRLNWKHWIISVVIGFI 883
+ + + + F
Sbjct: 848 EHSDTSIVAVVRIWIFSFG 866
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-05
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 158 DMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAA 217
DML+T+ G+ ++V +RR +G N +K F FL ++ AA
Sbjct: 78 DMLQTDTRVGLTSEEVV--QRRRKYGLNQMKEEKENHFLKFLGFFV-GPIQFVMEGAAVL 134
Query: 218 SLALG 222
+ L
Sbjct: 135 AAGLE 139
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 8e-33
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 37/171 (21%)
Query: 519 LLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPN 578
+A I D RP++KD + + G+K+ +++GD + ++ E I
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI----------- 175
Query: 579 IIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTND 638
+E + P DK+ +++ L++ G+ V + GDG ND
Sbjct: 176 ---------------QEYYSN------LS----PEDKVRIIEKLKQNGNKVLMIGDGVND 210
Query: 639 APALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANI 689
A AL AD+ +AMG G +++K +DII++ ++ +++ +++ + + I
Sbjct: 211 AAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAI 260
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 6e-31
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 38/171 (22%)
Query: 519 LLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPN 578
+ ++ + D RP ++AI + G+K M+TGDN A+ +A E G+
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL----------- 183
Query: 579 IIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTND 638
+ A V+ P +K V+ ++++ V A+ GDG ND
Sbjct: 184 --------------DDYFAE-------VL----PHEKAEKVKEVQQKY-VTAMVGDGVND 217
Query: 639 APALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANI 689
APAL +AD+G+A+G GT+VA E++DI+++ ++ V +V R Y+
Sbjct: 218 APALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKF 267
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 3e-30
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 37/171 (21%)
Query: 519 LLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPN 578
+A++ ++DP + S + I + +G+++ M+TGD+ +TA A+A GI
Sbjct: 545 TVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI----------- 593
Query: 579 IIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTND 638
+++ E +M P DK +V L+ +G +VA+ GDG ND
Sbjct: 594 ---------------KKVVAE------IM----PEDKSRIVSELKDKGLIVAMAGDGVND 628
Query: 639 APALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANI 689
APAL +ADIG+AMG GT+VA ES+ + +L + + K R S +NI
Sbjct: 629 APALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNI 678
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 4e-30
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 38/171 (22%)
Query: 519 LLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPN 578
+ I+ + D + S K A++ + G+KV M+TGDN ++A AI+ E + A+
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAE----- 208
Query: 579 IIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTND 638
V+ P K V+ L+ + VVA GDG ND
Sbjct: 209 ---------------------------VL----PHQKSEEVKKLQAKE-VVAFVGDGIND 236
Query: 639 APALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANI 689
APAL +AD+G+A+G G++VA ES DI+++ D+ VV ++ R + I
Sbjct: 237 APALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 286
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 9e-29
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 38/171 (22%)
Query: 519 LLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPN 578
+ I+ + D + S K A++ + G+KV M+TGDN ++A AI+ E +
Sbjct: 448 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 496
Query: 579 IIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTND 638
+ + E V+ P K V+ L+ + VVA GDG ND
Sbjct: 497 ---------------DLVIAE------VL----PHQKSEEVKKLQAKE-VVAFVGDGIND 530
Query: 639 APALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANI 689
APAL +AD+G+A+G G++VA ES DI+++ D+ VV ++ R + I
Sbjct: 531 APALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 580
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 3e-28
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 38/171 (22%)
Query: 519 LLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPN 578
+ I+ + D + S K A++ + G+KV M+TGDN ++A AI+ E +
Sbjct: 526 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 574
Query: 579 IIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTND 638
IA V+ P K V+ L+ + VVA GDG ND
Sbjct: 575 --------------DLVIAE-------VL----PHQKSEEVKKLQAKE-VVAFVGDGIND 608
Query: 639 APALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANI 689
APAL +AD+G+A+G G++VA ES DI+++ D+ VV ++ R + I
Sbjct: 609 APALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 658
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 2e-22
Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 9/142 (6%)
Query: 387 GSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAA 446
+ + A+L+ + ++ S + PF+ ++R V V + KGA
Sbjct: 33 KNLLDTAVLEGTDEESA--RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90
Query: 447 EIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE 506
+ +L+ C+ + + +V +D+ L K+ + + LR VA+A + +
Sbjct: 91 QEILNVCS-QVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRA 149
Query: 507 LSRWALPEDDLVLLAIVGIKDP 528
E DL+L + D
Sbjct: 150 D------ESDLILEGYIAFLDH 165
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 69.1 bits (168), Expect = 4e-12
Identities = 80/572 (13%), Positives = 156/572 (27%), Gaps = 196/572 (34%)
Query: 326 GTLTLNQMTVVEAYVGG--RK-----MNPTDSNSQLSPMVTSLLVEGIAQ-NTTGSVYLP 377
TL Q +V+ +V R M+P + + M+T + +E + V+
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK 128
Query: 378 PNGGEAEVSGSPTEKAILQWGMKL---------GMN--------FEAVRSECSVLHVFPF 420
N VS + Q ++L G+ + S V F
Sbjct: 129 YN-----VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY-KVQCKMDF 182
Query: 421 NSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIED 480
I W + L ++ + +++M + L
Sbjct: 183 K------------------IFW-----LNL----KNCNSPETVLEMLQKLLYQIDPNWTS 215
Query: 481 MASSSLRCVAIAYRTYERERIPD-EEELSR----WALPEDDLVLLAIVGIKDPCRPSVKD 535
+ S + RI + EL R LVL + +
Sbjct: 216 RSDHSSN---------IKLRIHSIQAELRRLLKSKPYENCLLVL------LNVQNAKAWN 260
Query: 536 AIRL-CRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQRE 594
A L C+I ++T Q + S A T ++ L+ + +
Sbjct: 261 AFNLSCKI------LLTTRFKQVTDFL--------SAATTTHISLDHHSM--TLTPDEVK 304
Query: 595 EIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG--LAMG 652
LL++ L R D P E +
Sbjct: 305 S---------------------LLLKYLDCR----------PQDLP--REVLTTNPRRLS 331
Query: 653 IQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQ-FQLTVNV---------- 701
I + D A W + N K + ++NV
Sbjct: 332 IIAES----------IRDGLA------TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375
Query: 702 AALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRR-EPL 760
L + F + +P + L+W ++I + L + S V ++ +
Sbjct: 376 DRLSV-FPPSA---HIPTILLSLIWFDVIKSD-------VMVVVNKLHKYSLVEKQPKES 424
Query: 761 ITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFN 820
+I ++ ++ ++ L+ + I++ H N K + + +
Sbjct: 425 TISIP--SIYLELKVKLENEYALH---RSIVD-------HYNIPKT-FDSDDLIPPYLDQ 471
Query: 821 EF---------NARKPDEKNIFGGITKNRLFM 843
F N P+ +F +F+
Sbjct: 472 YFYSHIGHHLKNIEHPERMTLF-----RMVFL 498
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.1 bits (129), Expect = 2e-07
Identities = 51/353 (14%), Positives = 104/353 (29%), Gaps = 85/353 (24%)
Query: 576 EPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAV-TGD 634
E ++ + + + + ++ E+ I + + L L K+ ++V +
Sbjct: 26 EDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEE 85
Query: 635 GTND-----APALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANI 689
+ +M T + E D + D+ + V R Y +
Sbjct: 86 VLRINYKFLMSPIKTEQRQPSMM---TRMYIEQRDRLYNDNQVFAKYNVSR--LQPYLKL 140
Query: 690 QKFIQFQLTV--NVA----------ALVINFVAAVSSGDV-PLNAVQLLWVNL------- 729
++ + +L NV + ++ S V ++ W+NL
Sbjct: 141 RQALL-ELRPAKNVLIDGVLGSGKTWVALD---VCLSYKVQCKMDFKIFWLNLKNCNSPE 196
Query: 730 -IMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMW---RNLLIQASYQVSVLLVLNF 785
+++ L L +P RS L + + R LL Y+ LLVL
Sbjct: 197 TVLEMLQKLLYQIDPN---WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC-LLVL-- 250
Query: 786 QGKRILNLESDSNAHSNKVKNTLIFNSFVL-CQI------------FNEFNARKPDEKNI 832
+ V+N +N+F L C+I + +
Sbjct: 251 ---------LN-------VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 833 FGGITKN---RLF---MGIVAVTL---VLQI--LIIQFLGKFASTTRLNWKHW 874
+T + L + L VL + + + W +W
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 7e-07
Identities = 86/608 (14%), Positives = 165/608 (27%), Gaps = 183/608 (30%)
Query: 114 DFAIGQEQLSIMTRDHNNNALQQFGRASLASYFPF-SSLQVKGLSDMLKTNLEK------ 166
DF G+ Q + L F A F + K + DM K+ L K
Sbjct: 8 DFETGEHQY------QYKDILSVFEDA-------FVDNFDCKDVQDMPKSILSKEEIDHI 54
Query: 167 -GIPGDD------VDLLKRRSAFGSNTYPRKKGRSF---WMFLWEAWQDLTLIILMIAAA 216
L + + + FL +
Sbjct: 55 IMSKDAVSGTLRLFWTLLSK---QEEMVQKFVEEVLRINYKFLMSPIK------------ 99
Query: 217 ASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQ-FKAGKTKVS-----DAVDGAIKILTV 270
TE R + Y Q F K VS + A+ L
Sbjct: 100 --------TEQRQPSMMTRMYIEQRDRLYNDNQVFA--KYNVSRLQPYLKLRQALLELRP 149
Query: 271 AVTIVVVAVPEGLP------LAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDK 324
A +++ +G+ +A+ + L+Y ++ M K L C + + +
Sbjct: 150 AKNVLI----DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205
Query: 325 TGTLTLNQMTVVEAYVGGRKMNPTDSNSQLS------PMVTSLLV--------------- 363
+ N + + + + ++L P LLV
Sbjct: 206 LYQIDPNWTSRSDHSSNIK-LRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264
Query: 364 ----------EGIAQNTTGSVYLPPNGGEAEVSGSPTE-KAIL-QWGMKLGMNFEAVRSE 411
+ + + + + ++ +P E K++L ++ L + + E
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY---LDCRPQDLPRE 321
Query: 412 CSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKL 471
VL P + + I AE + D + T D ++ DKL
Sbjct: 322 --VLTTNPR---------RLSI------I-----AESIRD----GLATWDNWKHVNCDKL 355
Query: 472 LT-FKKAIEDMASSSLRCVAIAYRTYER-------ERIPDEEELSR-WA-----LPEDDL 517
T + ++ + + R + ++R IP LS W +
Sbjct: 356 TTIIESSLNVLEPAEYR------KMFDRLSVFPPSAHIP-TILLSLIWFDVIKSDVMVVV 408
Query: 518 VLLAIVGI--KDPCRPSVKDAIRLCRIAGVKVRM-VTGDNIQTARAIALEC--GILTSEA 572
L + K P I + + + V +N ++ T ++
Sbjct: 409 NKLHKYSLVEKQPKE-------STISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS 461
Query: 573 DATEPNIIEGKSF----RALSETQREEIAGE------DFGM----ICVMG--RSSPSDKL 616
D P ++ + L + E DF I ++ L
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521
Query: 617 LLVQALRK 624
+Q L+
Sbjct: 522 NTLQQLKF 529
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 16/158 (10%), Positives = 41/158 (25%), Gaps = 15/158 (9%)
Query: 496 YERERIPDEEELS-RWAL--PEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTG 552
+ + +E + + L + + V R ++ + + +++G
Sbjct: 42 VLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISG 101
Query: 553 DNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSP 612
+ LE + + + G
Sbjct: 102 GMDFFVYPL-LEGIVEKDRIYCNHASFDNDY-IHIDWPHSCKGTCSNQCGC--------- 150
Query: 613 SDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLA 650
K ++ L + + + GD D A +D+ A
Sbjct: 151 -CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 892 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.93 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.94 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.91 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.86 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.8 | |
| 4aqr_D | 57 | Calcium-transporting ATPase 8, plasma membrane-TY; | 99.56 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.39 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.23 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.21 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.13 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.04 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.02 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.01 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.99 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.97 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.85 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.83 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.82 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.81 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.8 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.78 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.76 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.76 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.76 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.74 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.74 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.66 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.66 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.64 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.61 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.59 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.59 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.59 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.54 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.45 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.4 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.38 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.38 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.36 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.31 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.3 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.29 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.28 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.28 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.24 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.24 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.23 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.2 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.16 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.14 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.14 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.14 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.14 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.09 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.08 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.02 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.02 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.01 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.0 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.0 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.98 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.97 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.96 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.96 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.95 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.95 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.93 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.93 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.93 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.91 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.9 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.88 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.87 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.84 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.84 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.82 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.8 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.76 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.74 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.73 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.67 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.67 | |
| 2l1w_B | 26 | Vacuolar calcium ATPase BCA1 peptide; calmodulin, | 97.64 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.63 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.62 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.61 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.58 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.55 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.54 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.53 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.53 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.52 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.51 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.41 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.4 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.4 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.39 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.38 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.34 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.31 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.29 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.28 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.25 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.07 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.96 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.96 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.9 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.83 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.75 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.64 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.6 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.59 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.58 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.42 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.32 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.26 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.24 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.01 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.82 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.81 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 95.76 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 95.69 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 95.67 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.64 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 94.99 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.98 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.98 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 94.89 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 94.88 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 94.66 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.21 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.11 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.03 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 93.52 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 93.03 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 91.47 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 88.98 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 87.97 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 87.12 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 85.91 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 83.86 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 83.59 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 83.26 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 82.17 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 81.81 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-113 Score=1082.74 Aligned_cols=735 Identities=26% Similarity=0.379 Sum_probs=595.2
Q ss_pred cccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----
Q 043305 150 SLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIK----- 224 (892)
Q Consensus 150 ~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~----- 224 (892)
.++++++++.|+||+++|||++ |+++|+++||+|++++++++++|+.++++|.|++.++|+++|++|++++..
T Consensus 55 ~~~~~~~~~~l~~~~~~GLs~~--ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~ 132 (1034)
T 3ixz_A 55 QLSVAELEQKYQTSATKGLSAS--LAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEG 132 (1034)
T ss_pred hCCHHHHHHHhCCCcccCCCHH--HHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccC
Confidence 4569999999999999999998 999999999999999999999999999999999999999999999876411
Q ss_pred --------ceec---------------------------------------Cc---------------------------
Q 043305 225 --------TEYL---------------------------------------AG--------------------------- 230 (892)
Q Consensus 225 --------~eg~---------------------------------------~g--------------------------- 230 (892)
.++. ||
T Consensus 133 ~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD 212 (1034)
T 3ixz_A 133 DLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPAD 212 (1034)
T ss_pred CCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCC
Confidence 1111 22
Q ss_pred --EEEEE-------Eeecccc----ccc----cceE-----Eee----------------ccc-----------------
Q 043305 231 --VRFVR-------FFTGHTK----NAY----GTIQ-----FKA----------------GKT----------------- 255 (892)
Q Consensus 231 --vl~~~-------~~~~~~~----~~~----~~~~-----~~~----------------~~~----------------- 255 (892)
++.+. .++|... ... .+.. |.+ ..+
T Consensus 213 ~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~t 292 (1034)
T 3ixz_A 213 IRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKT 292 (1034)
T ss_pred eEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCCC
Confidence 11110 0111000 000 0000 000 000
Q ss_pred ccc----c----------------------hhhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccc
Q 043305 256 KVS----D----------------------AVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLS 309 (892)
Q Consensus 256 ~~~----~----------------------~~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~ 309 (892)
... . ....+.+.+..+++++|++||||||+++|++++++++||+|+|++||+++
T Consensus 293 pl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr~l~ 372 (1034)
T 3ixz_A 293 PIAIEIEHFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLE 372 (1034)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhhCCeEecChH
Confidence 000 0 00235567788999999999999999999999999999999999999999
Q ss_pred cccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCC-------CCCCCHHHHHHHHHHHHhcCCCccccCCCC--
Q 043305 310 ACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS-------NSQLSPMVTSLLVEGIAQNTTGSVYLPPNG-- 380 (892)
Q Consensus 310 a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~-------~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~-- 380 (892)
++|+||++++||||||||||+|+|+|+++|+++..+..... ....++....++..+..|| ++......+.
T Consensus 373 avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~-~a~~~~~~~~~~ 451 (1034)
T 3ixz_A 373 AVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCN-RAAFKSGQDAVP 451 (1034)
T ss_pred HHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhc-cceeccCcCCCc
Confidence 99999999999999999999999999999998765432211 0112233334444444444 4332111111
Q ss_pred -CCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCC---CcEEEEEcCceeeeecccccc
Q 043305 381 -GEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPN---SEVHIHWKGAAEIVLDSCTGY 456 (892)
Q Consensus 381 -~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~---~~~~~~~KGA~e~IL~~C~~~ 456 (892)
..+...|+|+|.|+++++.+.+.+....+.++++++.+||+|+||+|+++++..+ +++++++|||||.|+++|+++
T Consensus 452 ~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~ 531 (1034)
T 3ixz_A 452 VPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSI 531 (1034)
T ss_pred ccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHh
Confidence 1345789999999999999998888888999999999999999999998887543 678999999999999999987
Q ss_pred ccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh--hhhccCCCCCcEEEEEEEecCCCchhHH
Q 043305 457 IDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE--LSRWALPEDDLVLLAIVGIKDPCRPSVK 534 (892)
Q Consensus 457 ~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~--~~~~~~~e~~l~~lGlvgi~DplR~~v~ 534 (892)
. .+|+..+++++.++.+.+.+++|+.+|+||||+|||.++.++++.... .+..+.+|+||+|+|+++++||+|++++
T Consensus 532 ~-~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~ 610 (1034)
T 3ixz_A 532 L-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVP 610 (1034)
T ss_pred h-cCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHH
Confidence 6 467788999999999999999999999999999999987654432211 1122346899999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC-------------------CCCCceecchhhhhcCHHHHHH
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD-------------------ATEPNIIEGKSFRALSETQREE 595 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~-------------------~~~~~vi~G~~~~~l~~~e~~~ 595 (892)
++|++|+++||+|+|+|||+..||.+||++|||..++.. .....+++|.++..++++++.+
T Consensus 611 ~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~ 690 (1034)
T 3ixz_A 611 DAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVE 690 (1034)
T ss_pred HHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHHH
Confidence 999999999999999999999999999999999764321 1123588999999999999988
Q ss_pred HhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHH
Q 043305 596 IAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASV 675 (892)
Q Consensus 596 i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sI 675 (892)
.+... +..||||++|+||.++|+.+|+.|++|+|+|||.||+||||+||||||||++|+++||++||+|+.+|||++|
T Consensus 691 ~~~~~--~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI 768 (1034)
T 3ixz_A 691 ALRTH--PEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASI 768 (1034)
T ss_pred HHHhC--CceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHH
Confidence 87622 3369999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCC
Q 043305 676 VKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVG 755 (892)
Q Consensus 676 v~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~ 755 (892)
++++++||++|+||+|+++|++++|+.++++.+++.+++.+.||+++|+||+|+++|++|+++|++|||++++|+|||++
T Consensus 769 ~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~Pr~ 848 (1034)
T 3ixz_A 769 VTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRN 848 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C-CCCCccHHHHHHHHHH-HHHHHHHHHHHHHHhhh--------hcccCCC-------Cc-------------ccccccc
Q 043305 756 R-REPLITNIMWRNLLIQ-ASYQVSVLLVLNFQGKR--------ILNLESD-------SN-------------AHSNKVK 805 (892)
Q Consensus 756 r-~~~li~~~m~~~i~~~-ai~q~~v~~~l~~~g~~--------~~~~~~~-------~~-------------~~~~~~~ 805 (892)
+ +++++++.++..++++ ++++.++.++.+|.... ++++... +. .......
T Consensus 849 ~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (1034)
T 3ixz_A 849 PKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTC 928 (1034)
T ss_pred CccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhH
Confidence 7 6999999887765544 77776655554443211 1111000 00 0011236
Q ss_pred hhHHHHHHHHHHHhhhhcccCCCCccccc-CCcchHHHHHHHHHHHHHHHHH--HHHhhhccccccCChHHHHHHHHHHH
Q 043305 806 NTLIFNSFVLCQIFNEFNARKPDEKNIFG-GITKNRLFMGIVAVTLVLQILI--IQFLGKFASTTRLNWKHWIISVVIGF 882 (892)
Q Consensus 806 ~T~~F~~fV~~qvfn~~n~R~~~~~~~f~-~~~~N~~f~~~i~~~~~~qi~~--v~~~~~~f~~~~L~~~~w~~~i~~~~ 882 (892)
+|++|+++|++|+||.||||+.+ .++|+ ++++|+++++.+++++++|+++ +|+++.+|+++||++.+|++++++++
T Consensus 929 ~t~~f~~lv~~q~~~~~~~r~~~-~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 1007 (1034)
T 3ixz_A 929 YTVFFISIEMCQIADVLIRKTRR-LSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGL 1007 (1034)
T ss_pred HHHHHHHHHHHHHHHHHhhccCC-CcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCCCHHHHHHHHHHHH
Confidence 89999999999999999999865 45665 8899999999999999888765 57889999999999999999999999
Q ss_pred HHHHHHhhc
Q 043305 883 IRLFEHPVL 891 (892)
Q Consensus 883 ~~l~~~eiv 891 (892)
+.+++.|+.
T Consensus 1008 ~~~~~~e~~ 1016 (1034)
T 3ixz_A 1008 LIFVYDEIR 1016 (1034)
T ss_pred HHHHHHHHH
Confidence 999998863
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-111 Score=1059.51 Aligned_cols=735 Identities=26% Similarity=0.349 Sum_probs=591.4
Q ss_pred ccccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccc---
Q 043305 149 SSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKT--- 225 (892)
Q Consensus 149 ~~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~--- 225 (892)
..++++++++.|+||+++||+++ |+++|+++||+|++++++++++|+.++++|.|++.++|++||++|++++.+.
T Consensus 49 ~~~~~~~~~~~l~t~~~~GLs~~--e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 126 (1028)
T 2zxe_A 49 HKLSLDELHNKYGTDLTRGLTNA--RAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAAT 126 (1028)
T ss_dssp SSSCHHHHHHHHTCCSSSCBCHH--HHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhCCHHHHHHHhCcCccCCCCHH--HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhccc
Confidence 45669999999999999999987 8999999999999999999999999999999999999999999998875322
Q ss_pred ----------eec---------------------------------------Cc--------------------------
Q 043305 226 ----------EYL---------------------------------------AG-------------------------- 230 (892)
Q Consensus 226 ----------eg~---------------------------------------~g-------------------------- 230 (892)
+++ ||
T Consensus 127 ~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPa 206 (1028)
T 2zxe_A 127 EDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPA 206 (1028)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeec
Confidence 111 12
Q ss_pred ---EEEEEE-ee------ccc----ccc---------------------ccceE----Eeecccccc-------------
Q 043305 231 ---VRFVRF-FT------GHT----KNA---------------------YGTIQ----FKAGKTKVS------------- 258 (892)
Q Consensus 231 ---vl~~~~-~~------~~~----~~~---------------------~~~~~----~~~~~~~~~------------- 258 (892)
++.+.. .+ |.. +.. .|... ..+..+..+
T Consensus 207 D~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 286 (1028)
T 2zxe_A 207 DLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGR 286 (1028)
T ss_dssp EEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCC
T ss_pred eEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCC
Confidence 111211 11 100 000 00000 000000000
Q ss_pred c----hh--------------------------hhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeecc
Q 043305 259 D----AV--------------------------DGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRL 308 (892)
Q Consensus 259 ~----~~--------------------------~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l 308 (892)
. .. ..+...+..+++++|++||||||+++|+++++++++|+|+|++||++
T Consensus 287 t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~~ 366 (1028)
T 2zxe_A 287 TPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNL 366 (1028)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESST
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHhhCCceeccc
Confidence 0 00 12345667788899999999999999999999999999999999999
Q ss_pred ccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCC-------CCCCCHHHHHHHHHHHHhcCCCccccCCCC-
Q 043305 309 SACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS-------NSQLSPMVTSLLVEGIAQNTTGSVYLPPNG- 380 (892)
Q Consensus 309 ~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~-------~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~- 380 (892)
+++|+||++++||||||||||+|+|+|+++++++..+..... ....++....++..+ +.|+++......++
T Consensus 367 ~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-alc~~~~~~~~~~~h 445 (1028)
T 2zxe_A 367 EAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIA-ALCNRAVFQAGQDNV 445 (1028)
T ss_dssp THHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHH-HHSCCCEECTTCTTS
T ss_pred hHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHH-HhcCCCeeecCCCCC
Confidence 999999999999999999999999999999987654422110 011123333444444 44444332111111
Q ss_pred --CCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecC---CCcEEEEEcCceeeeeccccc
Q 043305 381 --GEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLP---NSEVHIHWKGAAEIVLDSCTG 455 (892)
Q Consensus 381 --~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~---~~~~~~~~KGA~e~IL~~C~~ 455 (892)
...+..|||+|.||++++.+.+.+....+..+++++.+||+|+||||+++++.+ ++++++++|||||.|+++|++
T Consensus 446 p~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~ 525 (1028)
T 2zxe_A 446 PILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCST 525 (1028)
T ss_dssp CGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEE
T ss_pred ccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhh
Confidence 123568999999999999988767777788899999999999999999999864 467899999999999999998
Q ss_pred cccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh--hhhccCCCCCcEEEEEEEecCCCchhH
Q 043305 456 YIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE--LSRWALPEDDLVLLAIVGIKDPCRPSV 533 (892)
Q Consensus 456 ~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~--~~~~~~~e~~l~~lGlvgi~DplR~~v 533 (892)
+. .+|+..+++++.++.+.+.+++|+++|+|||++|||+++.++++.... .+..+..|+|++|+|+++++||+||++
T Consensus 526 ~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~ 604 (1028)
T 2zxe_A 526 IL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAV 604 (1028)
T ss_dssp EC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTH
T ss_pred hh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhH
Confidence 64 478888999999999999999999999999999999987543332100 011234578999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC-------------------CCCCceecchhhhhcCHHHHH
Q 043305 534 KDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD-------------------ATEPNIIEGKSFRALSETQRE 594 (892)
Q Consensus 534 ~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~-------------------~~~~~vi~G~~~~~l~~~e~~ 594 (892)
+++|++|+++||+|+|+|||+..||.+||++|||..++.. .....+++|.++..+++++++
T Consensus 605 ~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~ 684 (1028)
T 2zxe_A 605 PDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLD 684 (1028)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHH
Confidence 9999999999999999999999999999999999854321 012368899999999999999
Q ss_pred HHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchH
Q 043305 595 EIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFAS 674 (892)
Q Consensus 595 ~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~s 674 (892)
+++... +..||||++|+||..+|+.+|+.|++|+|+|||.||+||||+||||||||++|+++||++||+|+.+|||++
T Consensus 685 ~~~~~~--~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~ 762 (1028)
T 2zxe_A 685 DILHYH--TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFAS 762 (1028)
T ss_dssp HHHHHC--SEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHH
T ss_pred HHHhhC--CcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHH
Confidence 888721 235999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCC
Q 043305 675 VVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPV 754 (892)
Q Consensus 675 Iv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~ 754 (892)
|++++++||++|+||+|+++|++++|+.+++..+++.++..+.|++++|+||+|+++|++|+++|++|||++++|+|||+
T Consensus 763 I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr 842 (1028)
T 2zxe_A 763 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPR 842 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC-CCccHHHHHH-HHHHHHHHHHHHHHHHHHhhhhccc---------------CCCCc----cc---------cccc
Q 043305 755 GRRE-PLITNIMWRN-LLIQASYQVSVLLVLNFQGKRILNL---------------ESDSN----AH---------SNKV 804 (892)
Q Consensus 755 ~r~~-~li~~~m~~~-i~~~ai~q~~v~~~l~~~g~~~~~~---------------~~~~~----~~---------~~~~ 804 (892)
++++ +++++.++.. ++..++++.++.++.++......+. ...+. .. ....
T Consensus 843 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (1028)
T 2zxe_A 843 NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFT 922 (1028)
T ss_dssp CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHH
T ss_pred CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhH
Confidence 8766 9999998776 4556788877665544432111110 00000 00 0125
Q ss_pred chhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHHHH--HhhhccccccCChHHHHHHHHHHH
Q 043305 805 KNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQ--FLGKFASTTRLNWKHWIISVVIGF 882 (892)
Q Consensus 805 ~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~v~--~~~~~f~~~~L~~~~w~~~i~~~~ 882 (892)
++|++|++||++|+||.||||+.+ .++|+..++|++|++++++++++|+++++ +++.+|+++||++.+|++|+++++
T Consensus 923 ~~T~~f~~~v~~q~~~~~~~r~~~-~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 1001 (1028)
T 2zxe_A 923 CHTSFFISIVVVQWADLIICKTRR-NSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSL 1001 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSS-SCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCC-cchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHH
Confidence 789999999999999999999864 46777558999999999999999887764 679999999999999999999999
Q ss_pred HHHHHHhh
Q 043305 883 IRLFEHPV 890 (892)
Q Consensus 883 ~~l~~~ei 890 (892)
+.+++.|+
T Consensus 1002 ~~~~~~e~ 1009 (1028)
T 2zxe_A 1002 IIFLYDEM 1009 (1028)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998876
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-110 Score=1048.65 Aligned_cols=732 Identities=30% Similarity=0.435 Sum_probs=587.0
Q ss_pred cccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccc----
Q 043305 150 SLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKT---- 225 (892)
Q Consensus 150 ~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~---- 225 (892)
.++++++++.|+||.++||+.+ |+++|+++||+|++++++++++|++++++|+|++.++|+++|++|+++++..
T Consensus 7 ~~~~~~~~~~l~~~~~~GLs~~--e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~ 84 (995)
T 3ar4_A 7 SKSTEECLAYFGVSETTGLTPD--QVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEE 84 (995)
T ss_dssp GSCHHHHHHHHTCCTTTCBCHH--HHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSG
T ss_pred hCCHHHHHHHhCCCcccCCCHH--HHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 5679999999999999999987 9999999999999999999999999999999999999999999999986433
Q ss_pred ------eec---------------------------------------Cc------------------------------
Q 043305 226 ------EYL---------------------------------------AG------------------------------ 230 (892)
Q Consensus 226 ------eg~---------------------------------------~g------------------------------ 230 (892)
++. ||
T Consensus 85 ~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~ 164 (995)
T 3ar4_A 85 TITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADI 164 (995)
T ss_dssp GGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEE
T ss_pred chhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccE
Confidence 111 11
Q ss_pred EEE-EEE---------eeccc----ccc------------------------ccceE----Eeecccc------------
Q 043305 231 VRF-VRF---------FTGHT----KNA------------------------YGTIQ----FKAGKTK------------ 256 (892)
Q Consensus 231 vl~-~~~---------~~~~~----~~~------------------------~~~~~----~~~~~~~------------ 256 (892)
++. +.- ++|.. +.. .|... ..+..+.
T Consensus 165 ~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 244 (995)
T 3ar4_A 165 RILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATE 244 (995)
T ss_dssp EEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTCC
T ss_pred EEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcCC
Confidence 110 100 00000 000 00000 0000000
Q ss_pred -----------------------------------------ccchhhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHH
Q 043305 257 -----------------------------------------VSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSM 295 (892)
Q Consensus 257 -----------------------------------------~~~~~~~~~~~~~~avtilvvavPegLplavtl~la~~~ 295 (892)
...++..+..+|..+++++|++||||||+++|+++++++
T Consensus 245 ~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~ 324 (995)
T 3ar4_A 245 QDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGT 324 (995)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHH
Confidence 000112223456688999999999999999999999999
Q ss_pred HHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCccc----------------CCCCC--------C
Q 043305 296 RKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKM----------------NPTDS--------N 351 (892)
Q Consensus 296 ~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~----------------~~~~~--------~ 351 (892)
++|+++|++||+++++|+||++++||||||||||+|+|+|++++..+..+ .+... .
T Consensus 325 ~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 404 (995)
T 3ar4_A 325 RRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIR 404 (995)
T ss_dssp HHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECC
T ss_pred HHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCcccccccccccc
Confidence 99999999999999999999999999999999999999999998753211 11000 0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCC-Ch--h-------------hhhccccee
Q 043305 352 SQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGM-NF--E-------------AVRSECSVL 415 (892)
Q Consensus 352 ~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~-~~--~-------------~~r~~~~i~ 415 (892)
...++.+.+++..+ +.|+++.+...++++.++..|||+|.||++++.+.|. +. . ..+..++++
T Consensus 405 ~~~~~~~~~l~~~~-alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 483 (995)
T 3ar4_A 405 SGQFDGLVELATIC-ALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 483 (995)
T ss_dssp GGGCHHHHHHHHHH-HHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEE
T ss_pred ccccHHHHHHHHHH-HHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceE
Confidence 01123344444333 4444443322222344566799999999999998876 21 1 134578899
Q ss_pred eeeccccCCceeEEEEecCCC-----cEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHH--HhccCeE
Q 043305 416 HVFPFNSLKKRGGVAVQLPNS-----EVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDM--ASSSLRC 488 (892)
Q Consensus 416 ~~~pF~S~rK~msvvv~~~~~-----~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~--a~~glR~ 488 (892)
+++||+|+||||+|+++.+++ ++++|+|||||.|+++|+++... ++..+++++.++.+.+.+++| +++|+||
T Consensus 484 ~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~GlRv 562 (995)
T 3ar4_A 484 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVG-TTRVPMTGPVKEKILSVIKEWGTGRDTLRC 562 (995)
T ss_dssp EEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEET-TEEEECCHHHHHHHHHHHHHHHHSTTCCEE
T ss_pred EEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcC-CCcccCCHHHHHHHHHHHHHHHhhhccceE
Confidence 999999999999999987655 68899999999999999987654 467889999999999999999 9999999
Q ss_pred EEEEEeccccCCCCc-hhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 043305 489 VAIAYRTYERERIPD-EEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGI 567 (892)
Q Consensus 489 l~~Ayk~~~~~~~~~-~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI 567 (892)
||+|||+++..+... .......+..|+|++|+|+++++||+|||++++|+.|+++||+|+|+|||+..||.+||++|||
T Consensus 563 La~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi 642 (995)
T 3ar4_A 563 LALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGI 642 (995)
T ss_dssp EEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTS
T ss_pred EEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCc
Confidence 999999885321000 0000112335789999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe
Q 043305 568 LTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI 647 (892)
Q Consensus 568 ~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV 647 (892)
...+.+ -...+++|+++..++++++.+++. +..||||++|+||.++|+.||++|++|+|+|||+||+||||+|||
T Consensus 643 ~~~~~~-i~~~~~~g~~~~~l~~~~~~~~~~----~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Adv 717 (995)
T 3ar4_A 643 FGENEE-VADRAYTGREFDDLPLAEQREACR----RACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEI 717 (995)
T ss_dssp SCTTCC-CTTTEEEHHHHHTSCHHHHHHHHH----HCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTE
T ss_pred CCCCCc-ccceEEEchhhhhCCHHHHHHHHh----hCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCe
Confidence 864321 124689999999999999999888 889999999999999999999999999999999999999999999
Q ss_pred eEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHH
Q 043305 648 GLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWV 727 (892)
Q Consensus 648 GIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwv 727 (892)
||||| +|+++||++||+++.+|||++|+++++|||++|+||+|+++|++++|+..++..+++++++.+.||+++|+||+
T Consensus 718 giamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~ 796 (995)
T 3ar4_A 718 GIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWV 796 (995)
T ss_dssp EEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHH
T ss_pred EEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH-hhhhc--------ccC----
Q 043305 728 NLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQ-GKRIL--------NLE---- 794 (892)
Q Consensus 728 nli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~-g~~~~--------~~~---- 794 (892)
|+++|++|+++|++|||++++|+|||+.++++++++.++.+++.+++++.++.+..+++ ..... .+.
T Consensus 797 nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (995)
T 3ar4_A 797 NLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQ 876 (995)
T ss_dssp HHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSS
T ss_pred HHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhccccc
Confidence 99999999999999999999999999999999999999999999999997765443221 11000 000
Q ss_pred --C--CCc-----c-cccccchhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHH--HHHhhh
Q 043305 795 --S--DSN-----A-HSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILI--IQFLGK 862 (892)
Q Consensus 795 --~--~~~-----~-~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~--v~~~~~ 862 (892)
+ ... . ......+|++|+++|++|+||.||||+.++..++.++++|+++++++++++++|+++ +++++.
T Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~ 956 (995)
T 3ar4_A 877 CTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPM 956 (995)
T ss_dssp CSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHH
T ss_pred cccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 0 001246899999999999999999998765445558899999998888888777655 467899
Q ss_pred ccccccCChHHHHHHHHHHHHHHHHHhhc
Q 043305 863 FASTTRLNWKHWIISVVIGFIRLFEHPVL 891 (892)
Q Consensus 863 ~f~~~~L~~~~w~~~i~~~~~~l~~~eiv 891 (892)
+|+++||++.+|+++++++++.+++.|+.
T Consensus 957 ~f~~~~l~~~~w~~~~~~~~~~~~~~e~~ 985 (995)
T 3ar4_A 957 IFKLKALDLTQWLMVLKISLPVIGLDEIL 985 (995)
T ss_dssp HTTCCCCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred hhccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888763
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-101 Score=947.97 Aligned_cols=688 Identities=20% Similarity=0.293 Sum_probs=531.9
Q ss_pred cccCHHHHHhhhccCChhHH---H---HhCCCcccCCCCcccccHHH-HHHHhcCCCCCCCCCChHHHHHHHHhcCCCCC
Q 043305 115 FAIGQEQLSIMTRDHNNNAL---Q---QFGRASLASYFPFSSLQVKG-LSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTY 187 (892)
Q Consensus 115 ~~~~~~~l~~~~~~~~~~~~---~---~~gg~~~~~~~~~~~~~~~g-l~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~ 187 (892)
+..+.++|.+.++.+|.+.. + ..|+ +++ +++.|+||..+||+++ |+++|+++||+|++
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~t~~~~GLs~~--ea~~r~~~~G~N~l 105 (920)
T 1mhs_A 41 EDEDIDALIEDLESHDGHDAEEEEEEATPGG-------------GRVVPEDMLQTDTRVGLTSE--EVVQRRRKYGLNQM 105 (920)
T ss_dssp CHHHHHHHHHHHSSCCCCCCSSSCCCSHHHH-------------HSCCSSTTTTTCCCCCCCSH--HHHHHHHHTSSSSC
T ss_pred hhcCHHHHHHHHhhhcccccccchhhhhcCc-------------cchhHHHHhCCCcCCCCCHH--HHHHHHHhcCCCcc
Confidence 55677777777764443322 1 2344 444 4567999999999988 89999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceec---------------------------------------
Q 043305 188 PRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYL--------------------------------------- 228 (892)
Q Consensus 188 ~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~--------------------------------------- 228 (892)
++++ +++|..++++|.+++.++|++|+++++++|.|.++.
T Consensus 106 ~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~R 184 (920)
T 1mhs_A 106 KEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLEDWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLR 184 (920)
T ss_dssp CCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEEC
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEE
Confidence 9665 789999999999999999999999999999876653
Q ss_pred Cc-----------------------------EEEEEE--ee------ccc---------------cccccceEEee----
Q 043305 229 AG-----------------------------VRFVRF--FT------GHT---------------KNAYGTIQFKA---- 252 (892)
Q Consensus 229 ~g-----------------------------vl~~~~--~~------~~~---------------~~~~~~~~~~~---- 252 (892)
|| ++.+.- .+ |.. ....|......
T Consensus 185 dG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG 264 (920)
T 1mhs_A 185 DGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATG 264 (920)
T ss_dssp SSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECS
T ss_pred CCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccccCCCCcceEecCCCeeecCceEecceEEEEEEEeC
Confidence 22 111210 00 000 00000000000
Q ss_pred cc-----------------ccccch--------------------------hhhHHHHHHHHHHHhhhcccCCchhHHHH
Q 043305 253 GK-----------------TKVSDA--------------------------VDGAIKILTVAVTIVVVAVPEGLPLAVTL 289 (892)
Q Consensus 253 ~~-----------------~~~~~~--------------------------~~~~~~~~~~avtilvvavPegLplavtl 289 (892)
.. ...... ...+.++|..+++++|++||||||+++|+
T Consensus 265 ~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti 344 (920)
T 1mhs_A 265 DNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTT 344 (920)
T ss_dssp TTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHH
Confidence 00 000000 01245677789999999999999999999
Q ss_pred HHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCCCCCCHHHHHHHHHHHHhc
Q 043305 290 TLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQN 369 (892)
Q Consensus 290 ~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~n 369 (892)
++++++++|+|+|++||+++++|+||++++||||||||||+|+|+|++++..+. ++ .+ +++..+..||
T Consensus 345 ~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~~--------~~---~ll~~a~l~~ 412 (920)
T 1mhs_A 345 TMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-VD--------PE---DLMLTACLAA 412 (920)
T ss_dssp HHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-CC--------CT---HHHHHHHHSC
T ss_pred HHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-CC--------HH---HHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999998875321 11 11 2333333333
Q ss_pred CCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeee
Q 043305 370 TTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIV 449 (892)
Q Consensus 370 ~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~I 449 (892)
... . . .+||+|.||++++.+.+.. ...+..+++++.+||+|.+|+|+++++.++++..+++|||||.|
T Consensus 413 ~~~----~--~-----~~~P~e~Al~~~~~~~~~~-~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~i 480 (920)
T 1mhs_A 413 SRK----K--K-----GIDAIDKAFLKSLKYYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFV 480 (920)
T ss_dssp CCS----S--C-----SCCSHHHHHHHHHHHSSSC-CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHH
T ss_pred CCc----c--c-----CCChHHHHHHHHHHhcccc-hhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHH
Confidence 221 0 1 1599999999999876642 23456788999999999999999999877777888999999999
Q ss_pred eccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCC
Q 043305 450 LDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPC 529 (892)
Q Consensus 450 L~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~Dpl 529 (892)
+++|+. ..+++++.++.+.+.+++|+++|+||+++|||.. |++++|+|+++++||+
T Consensus 481 l~~c~~-------~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~-----------------e~~l~~lGli~i~Dp~ 536 (920)
T 1mhs_A 481 LKTVEE-------DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-----------------EGSWEILGIMPCMDPP 536 (920)
T ss_dssp HHHCCC-------SSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS-----------------SCSCCCCBBCCCCCCC
T ss_pred HHhccc-------cCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc-----------------ccccEEEEEEEEeccc
Confidence 999974 2357788888999999999999999999999731 4578999999999999
Q ss_pred chhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEec
Q 043305 530 RPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGR 609 (892)
Q Consensus 530 R~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR 609 (892)
|||++++|++||++||+|+|+||||+.||.+||++|||..... ..+..+++|. ..++++++.+.++ +..||||
T Consensus 537 R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~-~~~~~~~~g~--~~~~~~el~~~~~----~~~V~ar 609 (920)
T 1mhs_A 537 RHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIY-NAERLGLGGG--GDMPGSEVYDFVE----AADGFAE 609 (920)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCC-CSSSSSSCBC--CCGGGGGGGTTTT----TTSCEES
T ss_pred cccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCcccc-CccceeecCc--ccCCHHHHHHHHh----hCeEEEE
Confidence 9999999999999999999999999999999999999974321 1123566776 5677777777777 7889999
Q ss_pred cCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHH
Q 043305 610 SSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANI 689 (892)
Q Consensus 610 ~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI 689 (892)
++|+||.++|+.||++|++|+|||||+||+||||+|||||||| +|+++||++||+++++|||++|++++++||++|+||
T Consensus 610 v~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni 688 (920)
T 1mhs_A 610 VFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRM 688 (920)
T ss_dssp CCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHH
Q 043305 690 QKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNL 769 (892)
Q Consensus 690 ~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i 769 (892)
+|+++|+++.|+...++.++...+. ..|+++.|++|+|+++|. |+++|++|+++.+ +||++++.+ .+|+.+
T Consensus 689 ~k~i~~~l~~n~~~~~~~~~~~~~~-~~~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~----~~~~~~ 759 (920)
T 1mhs_A 689 YAYVVYRIALSIHLEIFLGLWIAIL-NRSLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLP----KLWGMS 759 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSC-SCCCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSS----SCSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHH-HhhhhcccCcccc---cCCCCchHH----HHHHHH
Confidence 9999999999998754444333333 345999999999999997 8999999998765 677765542 233334
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCcccccccchhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHH
Q 043305 770 LIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVT 849 (892)
Q Consensus 770 ~~~ai~q~~v~~~l~~~g~~~~~~~~~~~~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~ 849 (892)
+.++++..+..++.++..+. .+..+. ........+|++|++++++|+|+.||+|+.+. +|++. .|+++++++++.
T Consensus 760 ~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~--~~~~~-~~~~~~~~~~~~ 834 (920)
T 1mhs_A 760 VLLGVVLAVGTWITVTTMYA-QGENGG-IVQNFGNMDEVLFLQISLTENWLIFITRANGP--FWSSI-PSWQLSGAIFLV 834 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-TTTTCC-SSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSS--CSCCS-CTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhccchh--hhcCc-hHHHHHHHHHHH
Confidence 45555555444333332221 111110 00112357999999999999999999998643 66655 788888887777
Q ss_pred HHHHHHHHHHhhhccccccCChHHHHHHHHHHHHHHHHHhh
Q 043305 850 LVLQILIIQFLGKFASTTRLNWKHWIISVVIGFIRLFEHPV 890 (892)
Q Consensus 850 ~~~qi~~v~~~~~~f~~~~L~~~~w~~~i~~~~~~l~~~ei 890 (892)
.++++++.++ + +|+++||+|.+|+++++++++.+++.|+
T Consensus 835 ~~~~~~~~~~-~-~f~~~~l~~~~~~~~~~~~~~~~~~~e~ 873 (920)
T 1mhs_A 835 DILATCFTIW-G-WFEHSDTSIVAVVRIWIFSFGIFCIMGG 873 (920)
T ss_dssp HHHHHHHHSS-S-STTSCSHHHHTHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHh-h-hhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 7777666543 4 8999999999999999999998888775
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-97 Score=915.03 Aligned_cols=669 Identities=20% Similarity=0.300 Sum_probs=503.1
Q ss_pred cccccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----
Q 043305 148 FSSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALG----- 222 (892)
Q Consensus 148 ~~~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg----- 222 (892)
...++++++++.|+|+ ++||+.+ |+++|+++||+|++++++ +++|..++++|.|++.++|++||++|+++|
T Consensus 14 ~~~~~~~~~~~~l~~~-~~GLs~~--e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~~ 89 (885)
T 3b8c_A 14 LEKIPIEEVFQQLKCS-REGLTTQ--EGEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGR 89 (885)
T ss_dssp CSSSSTTCCTTTSSSC-SSCSTHH--HHHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTTS
T ss_pred hHhCCHHHHHHHhCCC-CCCCCHH--HHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4456789999999998 6799987 999999999999999887 788889999999999999999999999998
Q ss_pred --ccceec---------------------------------------Cc-----------------------------EE
Q 043305 223 --IKTEYL---------------------------------------AG-----------------------------VR 232 (892)
Q Consensus 223 --~~~eg~---------------------------------------~g-----------------------------vl 232 (892)
.|.++. || ++
T Consensus 90 ~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll 169 (885)
T 3b8c_A 90 PPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLL 169 (885)
T ss_dssp CSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCC
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEE
Confidence 454443 11 00
Q ss_pred EEEE-------eec--------------------------------cc------------cccccceEEeeccccccch-
Q 043305 233 FVRF-------FTG--------------------------------HT------------KNAYGTIQFKAGKTKVSDA- 260 (892)
Q Consensus 233 ~~~~-------~~~--------------------------------~~------------~~~~~~~~~~~~~~~~~~~- 260 (892)
.+.. ++| .. ....++++-... .....
T Consensus 170 ~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~--~i~~~~ 247 (885)
T 3b8c_A 170 EGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT--AIGNFC 247 (885)
T ss_dssp CSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTH--HHHHHH
T ss_pred EcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHH--HHHHHH
Confidence 0000 000 00 000011110000 00000
Q ss_pred -------------------hhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEE
Q 043305 261 -------------------VDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTIC 321 (892)
Q Consensus 261 -------------------~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~Ic 321 (892)
...+.+.+..+++++|++||||||+++|+++++++++|+|+|++||+++++|+||++++||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic 327 (885)
T 3b8c_A 248 ICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 327 (885)
T ss_dssp HHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCE
T ss_pred HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEE
Confidence 0122345667889999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCcccCceEEEEEEeCCcccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHc
Q 043305 322 SDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKL 401 (892)
Q Consensus 322 sDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~ 401 (892)
||||||||+|+|+|++.++. .+. ...++ .+++..+.+|+.. ..+||+|.|+++++.+
T Consensus 328 ~DKTGTLT~n~m~v~~~~~~--~~~-----~~~~~--~~ll~~aa~~~~~-------------~~~~p~~~Al~~~~~~- 384 (885)
T 3b8c_A 328 SDKTGTLTLNKLSVDKNLVE--VFC-----KGVEK--DQVLLFAAMASRV-------------ENQDAIDAAMVGMLAD- 384 (885)
T ss_dssp EECCCCCSCCCCCCCSCCCC--SSC-----SSTTH--HHHHHHHHHHCCS-------------SSCCSHHHHHHHTTCC-
T ss_pred ECCCCCcccCceEEEEEEEe--ccC-----CCCCH--HHHHHHHHHHhCC-------------CCCCchHHHHHHHhhc-
Confidence 99999999999999753321 010 01122 1333334444321 0379999999988643
Q ss_pred CCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHH
Q 043305 402 GMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDM 481 (892)
Q Consensus 402 g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~ 481 (892)
..+.+..+++++.+||+|.+|||+++++..+++.++++|||||.++++|+. +++.++.+.+.+++|
T Consensus 385 ---~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~-----------~~~~~~~~~~~~~~~ 450 (885)
T 3b8c_A 385 ---PKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKA-----------SNDLSKKVLSIIDKY 450 (885)
T ss_dssp ---TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCC-----------CSTTTTTHHHHHHHH
T ss_pred ---hhhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccC-----------chhhHHHHHHHHHHH
Confidence 223455788899999999999999998866777788999999999999963 112234577888999
Q ss_pred HhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHH
Q 043305 482 ASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAI 561 (892)
Q Consensus 482 a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aI 561 (892)
+++|+||+++||++++.++ .+..|++++|+|+++++||+|||++++|++||++||+|+|+||||..||++|
T Consensus 451 a~~G~rvl~vA~~~~~~~~---------~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~i 521 (885)
T 3b8c_A 451 AERGLRSLAVARQVVPEKT---------KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET 521 (885)
T ss_dssp TTTTCEEEEECCBCCCSSS---------SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHH
T ss_pred HhCCCeEEEEEEecccccc---------ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHH
Confidence 9999999999999886421 2345789999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCcCCCCCCceecchhhhh-cCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChH
Q 043305 562 ALECGILTSEADATEPNIIEGKSFRA-LSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAP 640 (892)
Q Consensus 562 A~~~GI~~~~~~~~~~~vi~G~~~~~-l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDap 640 (892)
|+++||..... ...+++|.++++ ++++++++++. +..||||++|+||.++|+.||++|++|+|||||+||+|
T Consensus 522 A~~lGi~~~~~---~~~~l~g~~~~~~~~~~~l~~~~~----~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDap 594 (885)
T 3b8c_A 522 GRRLGMGTNMY---PSSALLGTHKDANLASIPVEELIE----KADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAP 594 (885)
T ss_dssp HHTTTCTTCCS---TTSSCCBGGGGTTSCCSCHHHHHH----TSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHH
T ss_pred HHHhCCccccC---CcceeeccccccccchhHHHHHHh----hCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHH
Confidence 99999974321 124677888876 77777888888 78899999999999999999999999999999999999
Q ss_pred hhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q 043305 641 ALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLN 720 (892)
Q Consensus 641 ALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~ 720 (892)
|||+|||||||| +|+++||++||+++++|||++|++++++||++|+||+|++.|++++|+..++..+... +..+.|++
T Consensus 595 aLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~-~~~~~~l~ 672 (885)
T 3b8c_A 595 ALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA-LIWEFDFS 672 (885)
T ss_dssp HHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHH-SSCSSCSC
T ss_pred HHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCcCcC
Confidence 999999999999 8999999999999999999999999999999999999999999999997544444333 35668999
Q ss_pred HHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhh--h----cccC
Q 043305 721 AVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKR--I----LNLE 794 (892)
Q Consensus 721 ~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~--~----~~~~ 794 (892)
|+|++|+|+++|..+ +++++|++.+. ++| +...+ +.++..++..++++.+..+++++.+.. . ++.+
T Consensus 673 p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (885)
T 3b8c_A 673 AFMVLIIAILNDGTI-MTISKDRVKPS---PTP---DSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVR 744 (885)
T ss_dssp HHHHHHHHHHHHTTT-CCCCCCCCCCS---SCC---CSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSS
T ss_pred HHHHHHHHHHHHHHH-HhhcccccCcc---cCC---cchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCcc
Confidence 999999999999875 99999887552 233 33333 333444556666666665544433321 0 1110
Q ss_pred CCCcccccccchh-HHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhccccccCChHH
Q 043305 795 SDSNAHSNKVKNT-LIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKH 873 (892)
Q Consensus 795 ~~~~~~~~~~~~T-~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~v~~~~~~f~~~~L~~~~ 873 (892)
. ........+| +.|.+++++|+ +.||+|+.. .++|+.. .|++++++++.++++|++.+.+...+|+++|++|.+
T Consensus 745 ~--~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 819 (885)
T 3b8c_A 745 S--IRDNNHELMGAVYLQVSIISQA-LIFVTRSRS-WSFVERP-GALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGW 819 (885)
T ss_dssp C--CGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCT-TTSTTST-TTTTSGGGSSTTTTTTSSSSSCCCCSSCCCCCTTTT
T ss_pred c--ccchHHHHHHHHHHHHHHHHHH-HHHHhccCC-CCcccCc-cHHHHHHHHHHHHHHHHHHHhccccccccCCchHHH
Confidence 0 0000123434 46667888886 899999864 3455433 455555555555555555544334566799999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 043305 874 WIISVVIGFIRLFEHPV 890 (892)
Q Consensus 874 w~~~i~~~~~~l~~~ei 890 (892)
|+++++++++.+++.|+
T Consensus 820 ~~~~~~~~~~~~~~~e~ 836 (885)
T 3b8c_A 820 AGVIWLYSIVTYFPLDV 836 (885)
T ss_dssp HHHHHHHTGGGTHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999888877776664
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-55 Score=532.20 Aligned_cols=331 Identities=27% Similarity=0.374 Sum_probs=281.6
Q ss_pred HHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCc
Q 043305 264 AIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR 343 (892)
Q Consensus 264 ~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~ 343 (892)
+...+..++++++++|||+||++++++++.++.+|+++|++||+++++|+||++++||||||||||+|+|+|++++..+.
T Consensus 367 ~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~ 446 (736)
T 3rfu_A 367 LSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDF 446 (736)
T ss_dssp TTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSS
T ss_pred HHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCC
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999984321
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccC
Q 043305 344 KMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSL 423 (892)
Q Consensus 344 ~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~ 423 (892)
+ .++.+. .+.+.. ..+.||.+.|+++++.+.|... ....+|++.
T Consensus 447 --~--------~~~~l~---~aa~le--------------~~s~hPla~Aiv~~a~~~~~~~---------~~~~~f~~~ 490 (736)
T 3rfu_A 447 --V--------EDNALA---LAAALE--------------HQSEHPLANAIVHAAKEKGLSL---------GSVEAFEAP 490 (736)
T ss_dssp --C--------HHHHHH---HHHHHH--------------HSSCCHHHHHHHHHHHTTCCCC---------CCCSCCCCC
T ss_pred --C--------HHHHHH---HHHHHh--------------hcCCChHHHHHHHHHHhcCCCc---------cCccccccc
Confidence 0 122222 222211 1246999999999998876543 234578888
Q ss_pred CceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCc
Q 043305 424 KKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPD 503 (892)
Q Consensus 424 rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~ 503 (892)
+++.. ....++.. +.+|+++.+.+.+.. ...+.+..++++.+|+|++++|+
T Consensus 491 ~g~gv-~~~~~g~~---~~~G~~~~~~~~~~~---------------~~~~~~~~~~~~~~G~~vl~va~---------- 541 (736)
T 3rfu_A 491 TGKGV-VGQVDGHH---VAIGNARLMQEHGGD---------------NAPLFEKADELRGKGASVMFMAV---------- 541 (736)
T ss_dssp TTTEE-EECSSSSC---EEEESHHHHHHHCCC---------------CHHHHHHHHHHHHTTCEEEEEEE----------
T ss_pred CCceE-EEEECCEE---EEEcCHHHHHHcCCC---------------hhHHHHHHHHHHhcCCeEEEEEE----------
Confidence 77643 33333333 346888765433211 12356678899999999999996
Q ss_pred hhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecch
Q 043305 504 EEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGK 583 (892)
Q Consensus 504 ~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~ 583 (892)
|.+++|+++++|++|++++++|++|+++||+++|+|||+..+|.++|+++||.
T Consensus 542 ------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~--------------- 594 (736)
T 3rfu_A 542 ------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK--------------- 594 (736)
T ss_dssp ------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC---------------
T ss_pred ------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC---------------
Confidence 34799999999999999999999999999999999999999999999999995
Q ss_pred hhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcc
Q 043305 584 SFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESS 663 (892)
Q Consensus 584 ~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaa 663 (892)
.++++++|+||.++|+.||++|+.|+|+|||.||+|||++|||||||| +|+++++++|
T Consensus 595 ---------------------~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~A 652 (736)
T 3rfu_A 595 ---------------------KVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESA 652 (736)
T ss_dssp ---------------------CEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHC
T ss_pred ---------------------EEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhC
Confidence 388999999999999999999999999999999999999999999999 8999999999
Q ss_pred cEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 664 DIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINF 708 (892)
Q Consensus 664 Diil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~ 708 (892)
|+++++|++..|++++++||++|+||++++.|.+.+|++++.+..
T Consensus 653 D~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAa 697 (736)
T 3rfu_A 653 GVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAA 697 (736)
T ss_dssp SEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998876643
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-53 Score=519.88 Aligned_cols=398 Identities=25% Similarity=0.282 Sum_probs=306.2
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceecCcEEEEEEeeccccccccceEEeeccccccchhhhHHHHHH
Q 043305 190 KKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILT 269 (892)
Q Consensus 190 ~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (892)
+.+++-.+.+.+.+-..++.++++.|+++++++... .. ..+...+.
T Consensus 311 ~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~-------------~~---------------------~~~~~~~~ 356 (723)
T 3j09_A 311 MGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFI-------------AH---------------------APLLFAFT 356 (723)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSS-------------TT---------------------CTTCCSHH
T ss_pred hccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------cC---------------------CcHHHHHH
Confidence 345677777888887777777666667666554321 00 01233478
Q ss_pred HHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCC
Q 043305 270 VAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTD 349 (892)
Q Consensus 270 ~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~ 349 (892)
.++++++++|||+||++++++++.++.+|+++|++||+++++|+||++++||||||||||+|+|+|++++..+..
T Consensus 357 ~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~----- 431 (723)
T 3j09_A 357 TLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD----- 431 (723)
T ss_dssp HHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC-----
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC-----
Confidence 889999999999999999999999999999999999999999999999999999999999999999999875310
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEE
Q 043305 350 SNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGV 429 (892)
Q Consensus 350 ~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msv 429 (892)
.+++ +..+.++. ..+.||++.|+++++.+.|..... ..+|.+...+...
T Consensus 432 -----~~~~---l~~aa~~e--------------~~s~hP~~~Ai~~~a~~~~~~~~~---------~~~~~~~~g~g~~ 480 (723)
T 3j09_A 432 -----EREL---LRLAAIAE--------------RRSEHPIAEAIVKKALEHGIELGE---------PEKVEVIAGEGVV 480 (723)
T ss_dssp -----HHHH---HHHHHHHH--------------TTCCSHHHHHHHHHHHHTTCCCCS---------CCCCEEETTTEEE
T ss_pred -----HHHH---HHHHHHHh--------------ccCCCchhHHHHHHHHhcCCCcCC---------ccceEEecCCceE
Confidence 1222 22222221 124699999999999988764322 1123222221111
Q ss_pred EEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhh
Q 043305 430 AVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSR 509 (892)
Q Consensus 430 vv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~ 509 (892)
. . .+.+|+++.+. ..+. +. .+.+.+.+++++.+|+|++++|+
T Consensus 481 ~-----~---~~~~g~~~~~~--------~~~~--~~----~~~~~~~~~~~~~~g~~~~~va~---------------- 522 (723)
T 3j09_A 481 A-----D---GILVGNKRLME--------DFGV--AV----SNEVELALEKLEREAKTAVIVAR---------------- 522 (723)
T ss_dssp E-----T---TEEEECHHHHH--------HTTC--CC----CHHHHHHHHHHHTTTCEEEEEEE----------------
T ss_pred E-----E---EEEECCHHHHH--------hcCC--Cc----cHHHHHHHHHHHhcCCeEEEEEE----------------
Confidence 0 1 13345544332 2221 11 23567788899999999999995
Q ss_pred ccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcC
Q 043305 510 WALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALS 589 (892)
Q Consensus 510 ~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~ 589 (892)
|++++|+++++|++||+++++|++|+++||+++|+|||+..+|.++|+++||.
T Consensus 523 ------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--------------------- 575 (723)
T 3j09_A 523 ------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--------------------- 575 (723)
T ss_dssp ------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS---------------------
T ss_pred ------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc---------------------
Confidence 46899999999999999999999999999999999999999999999999985
Q ss_pred HHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcC
Q 043305 590 ETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILD 669 (892)
Q Consensus 590 ~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~d 669 (892)
.+++|++|+||..+|+.||++ +.|+|+|||.||+|||++|||||||| +|+++++++||+++.+
T Consensus 576 ---------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~ 638 (723)
T 3j09_A 576 ---------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIR 638 (723)
T ss_dssp ---------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSS
T ss_pred ---------------EEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeC
Confidence 589999999999999999988 99999999999999999999999999 9999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCchhHHHHHHHHhhhhhhhhhhc
Q 043305 670 DNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSS---GDVPLNAVQLLWVNLIMDTLGALAL 739 (892)
Q Consensus 670 dnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~---~~~pl~~vqlLwvnli~d~l~alaL 739 (892)
|++..|++++++||++|+||++++.|.+++|++.+.+.+.+.... .-.|..+.-....+-+.-.+-++-|
T Consensus 639 ~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl 711 (723)
T 3j09_A 639 DDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLL 711 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCHHHHHHHHhccHHHHHHHHHHh
Confidence 999999999999999999999999999999998766654331111 1234444444444444444444444
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-54 Score=514.38 Aligned_cols=397 Identities=25% Similarity=0.288 Sum_probs=302.7
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceecCcEEEEEEeeccccccccceEEeeccccccchhhhHHHHHHH
Q 043305 191 KGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTV 270 (892)
Q Consensus 191 ~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (892)
.+++..+.+.+.+-..++.++++.+++.++.+.... . . .+...+..
T Consensus 234 ~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~-------------~-----~----------------~~~~~~~~ 279 (645)
T 3j08_A 234 GSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA-------------H-----A----------------PLLFAFTT 279 (645)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC-------------S-----C----------------SCCCTTTT
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------C-----C----------------cHHHHHHH
Confidence 345566677777776666666666666665543210 0 0 01223567
Q ss_pred HHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCC
Q 043305 271 AVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS 350 (892)
Q Consensus 271 avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~ 350 (892)
++++++++|||+||++++++++.++.+|+|+|++||+++++|+||++++||||||||||+|+|+|++++..+..
T Consensus 280 ~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~------ 353 (645)
T 3j08_A 280 LIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD------ 353 (645)
T ss_dssp THHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC------
Confidence 88999999999999999999999999999999999999999999999999999999999999999999875310
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEE
Q 043305 351 NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVA 430 (892)
Q Consensus 351 ~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvv 430 (892)
.++. +..+.++. ..+.||++.|+++++.+.|.+... ..+|.+...+....
T Consensus 354 ----~~~~---l~~aa~~e--------------~~s~hPla~Aiv~~a~~~g~~~~~---------~~~~~~~~g~g~~~ 403 (645)
T 3j08_A 354 ----EREL---LRLAAIAE--------------RRSEHPIAEAIVKKALEHGIELGE---------PEKVEVIAGEGVVA 403 (645)
T ss_dssp ----HHHH---HHHHHHHH--------------TTCCSHHHHHHHHHHHHTTCCCCS---------CCCCEEETTTEEEE
T ss_pred ----HHHH---HHHHHHHh--------------hcCCChhHHHHHHHHHhcCCCcCC---------ccceEEecCCceEE
Confidence 1222 22222221 124699999999999988764322 12232222221110
Q ss_pred EecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhc
Q 043305 431 VQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRW 510 (892)
Q Consensus 431 v~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~ 510 (892)
. .+.+|+++.+ ...+. +. .+.+.+.+++++.+|+|++++|+
T Consensus 404 -----~---~v~~g~~~~~--------~~~~~--~~----~~~~~~~~~~~~~~g~~~l~va~----------------- 444 (645)
T 3j08_A 404 -----D---GILVGNKRLM--------EDFGV--AV----SNEVELALEKLEREAKTAVIVAR----------------- 444 (645)
T ss_dssp -----T---TEEEECHHHH--------HHTTC--CC----CHHHHHHHHHHHTTTCCCEEEEE-----------------
T ss_pred -----E---EEEECCHHHH--------HhcCC--Cc----cHHHHHHHHHHHhcCCeEEEEEE-----------------
Confidence 1 1234554433 22221 11 23567778899999999999996
Q ss_pred cCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCH
Q 043305 511 ALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSE 590 (892)
Q Consensus 511 ~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~ 590 (892)
|++++|+++++|++||+++++|++|+++||+++|+|||+..+|+++|+++||.
T Consensus 445 -----~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~---------------------- 497 (645)
T 3j08_A 445 -----NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD---------------------- 497 (645)
T ss_dssp -----TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----------------------
T ss_pred -----CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC----------------------
Confidence 45899999999999999999999999999999999999999999999999985
Q ss_pred HHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCC
Q 043305 591 TQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDD 670 (892)
Q Consensus 591 ~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~dd 670 (892)
.+++|++|+||..+|+.||++ +.|+|+|||.||+|||++|||||||| +|+++++++||+++.+|
T Consensus 498 --------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~ 561 (645)
T 3j08_A 498 --------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRD 561 (645)
T ss_dssp --------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSC
T ss_pred --------------EEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecC
Confidence 589999999999999999998 99999999999999999999999999 99999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCchhHHHHHHHHhhhhhhhhhhc
Q 043305 671 NFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSS---GDVPLNAVQLLWVNLIMDTLGALAL 739 (892)
Q Consensus 671 nf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~---~~~pl~~vqlLwvnli~d~l~alaL 739 (892)
+++.+.+++++||++|+||++++.|.+++|++.+.+.+.+.... .-.|.-+.-....+-+.-.+-++-|
T Consensus 562 ~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl 633 (645)
T 3j08_A 562 DLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLL 633 (645)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHHHHHHHHTTSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccccCHHHHHHHHhcchHHHHHhhHHh
Confidence 99999999999999999999999999999998666544321111 1234444444444444444444443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-31 Score=286.01 Aligned_cols=260 Identities=23% Similarity=0.379 Sum_probs=195.8
Q ss_pred HHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 043305 293 YSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTG 372 (892)
Q Consensus 293 ~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~ 372 (892)
.++.+++|+|+|||+.+++|+|+++++||||||||||+|+|.|.+++ +. ++++.++. ++
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~------~~--------~~~l~~~~-~~------ 62 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI------GD--------SLSLAYAA-SV------ 62 (263)
Confidence 36789999999999999999999999999999999999999998774 00 11111110 10
Q ss_pred ccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeecc
Q 043305 373 SVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDS 452 (892)
Q Consensus 373 ~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~ 452 (892)
...+.||...|+..++.+.|...... ..|.. ..+.+....++|...
T Consensus 63 ----------e~~s~hp~a~ai~~~~~~~g~~~~~~---------~~~~~----------~~G~g~~~~~~~~~~----- 108 (263)
T 2yj3_A 63 ----------EALSSHPIAKAIVKYAKEQGVKILEV---------KDFKE----------ISGIGVRGKISDKII----- 108 (263)
Confidence 12256899999999887665431110 00100 011111111111000
Q ss_pred ccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchh
Q 043305 453 CTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPS 532 (892)
Q Consensus 453 C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~ 532 (892)
.+ |. . .++.+ +.++ .+-.+.|.+.+.|+++|+
T Consensus 109 ---~~---G~------~-------------~~~~~-~~~~----------------------~~~~~~~~~~~~~~~~~g 140 (263)
T 2yj3_A 109 ---EV---KK------A-------------ENNND-IAVY----------------------INGEPIASFNISDVPRPN 140 (263)
Confidence 00 00 0 01222 2222 233578999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCH
Q 043305 533 VKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSP 612 (892)
Q Consensus 533 v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP 612 (892)
+.++++.|++.|+++.|+|||+..++..+++++||. .+|+...|
T Consensus 141 ~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~------------------------------------~~f~~~~p 184 (263)
T 2yj3_A 141 LKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ------------------------------------EYYSNLSP 184 (263)
Confidence 999999999999999999999999999999999985 23445569
Q ss_pred hhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHH
Q 043305 613 SDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKF 692 (892)
Q Consensus 613 ~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~ 692 (892)
++|..+++.++..++.|+|+|||.||++|++.||+|++|| ++++.+++.+|++++++++..+..+++.+|.++.+|+++
T Consensus 185 ~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 185 EDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 9999999999999999999999999999999999999999 789999999999999999999999999999999999874
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-25 Score=242.97 Aligned_cols=277 Identities=28% Similarity=0.381 Sum_probs=201.9
Q ss_pred HHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCCCCCCHHHHHHHHHHHHhcCCCc
Q 043305 294 SMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGS 373 (892)
Q Consensus 294 ~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~ 373 (892)
+.++|+|+|++||++.++|+|+++++||||||||||.+.+.+.+++..+. ..++++++ +.+..
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------~~~~~l~~---~~~~e---- 71 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------DERELLRL---AAIAE---- 71 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------CHHHHHHH---HHHHT----
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----------CHHHHHHH---HHHHh----
Confidence 56889999999999999999999999999999999999999998887532 01223222 11111
Q ss_pred cccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCCCcEE--EEEcCceeeeec
Q 043305 374 VYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVH--IHWKGAAEIVLD 451 (892)
Q Consensus 374 ~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~--~~~KGA~e~IL~ 451 (892)
..+.||.+.|+.+++.+.|+...... .|.+. .+.+.. .+.+|.++.+
T Consensus 72 ----------~~s~hp~~~a~~~~~~~~g~~~~~~~---------~~~~~----------~G~~~~~~~~~~g~~~~~-- 120 (287)
T 3a1c_A 72 ----------RRSEHPIAEAIVKKALEHGIELGEPE---------KVEVI----------AGEGVVADGILVGNKRLM-- 120 (287)
T ss_dssp ----------TTCCSHHHHHHHHHHHHTTCCCCCCS---------CEEEE----------TTTEEEETTEEEECHHHH--
T ss_pred ----------hcCCCHHHHHHHHHHHhcCCCccccc---------cceee----------cCCCeEEEEEEECCHHHH--
Confidence 12479999999999998886421100 01000 111111 0122332211
Q ss_pred cccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCch
Q 043305 452 SCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRP 531 (892)
Q Consensus 452 ~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~ 531 (892)
...+. +++ +.+.+..+.+..+|.+++++++ +.++.+.+..+++++|
T Consensus 121 ------~~~~~--~~~----~~~~~~~~~~~~~g~~~i~~~~----------------------d~~~~~~~~~~~~~~~ 166 (287)
T 3a1c_A 121 ------EDFGV--AVS----NEVELALEKLEREAKTAVIVAR----------------------NGRVEGIIAVSDTLKE 166 (287)
T ss_dssp ------HHTTC--CCC----HHHHHHHHHHHHTTCEEEEEEE----------------------TTEEEEEEEEECCBCT
T ss_pred ------HhcCC--Ccc----HHHHHHHHHHHhCCCeEEEEEE----------------------CCEEEEEEEeccccch
Confidence 11111 111 1345567778889999999986 2368899999999999
Q ss_pred hHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccC
Q 043305 532 SVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSS 611 (892)
Q Consensus 532 ~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~s 611 (892)
++.++++.|+++|+++.++||++...+..+++.+|+. .+|....
T Consensus 167 g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~------------------------------------~~f~~i~ 210 (287)
T 3a1c_A 167 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------------LVIAEVL 210 (287)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------------EEECSCC
T ss_pred hHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc------------------------------------eeeeecC
Confidence 9999999999999999999999999999999999985 2455556
Q ss_pred HhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHH
Q 043305 612 PSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQ 690 (892)
Q Consensus 612 P~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~ 690 (892)
|..|...++.|+.. +.++|+||+.||.+|.+.|++|+++| ++.+..++.+|+++.++++..+..++.++|.++.|||
T Consensus 211 ~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 211 PHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp TTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred hHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 88999999999888 89999999999999999999999998 6777778899999988899999999999999999986
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-23 Score=220.85 Aligned_cols=276 Identities=25% Similarity=0.351 Sum_probs=192.2
Q ss_pred eeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCcc
Q 043305 305 VRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAE 384 (892)
Q Consensus 305 Vr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~ 384 (892)
+|+++++|+|+++++||||||||||.|+|+|.+++..+. ..+.+..++ .++..
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~----------~~~~~~~~~-~~~~~---------------- 53 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH----------SEDELLQIA-ASLEA---------------- 53 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS----------CHHHHHHHH-HHHHT----------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC----------CHHHHHHHH-HHhhc----------------
Confidence 688999999999999999999999999999999886432 112232222 11111
Q ss_pred ccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCccc
Q 043305 385 VSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLV 464 (892)
Q Consensus 385 ~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~ 464 (892)
.+.+|...++.+.+.+.|...... ..+..++ .+.....+ .+. . +..|.++.+...+. .
T Consensus 54 ~s~~~~~~a~~~~~~~~g~~~~~~----~~~~~~~----g~~~~~~~--~~~--~-~~~~~~~~~~~~~~--------~- 111 (280)
T 3skx_A 54 RSEHPIAAAIVEEAEKRGFGLTEV----EEFRAIP----GKGVEGIV--NGR--R-YMVVSPGYIRELGI--------K- 111 (280)
T ss_dssp TCCSHHHHHHHHHHHHTTCCCCCC----EEEEEET----TTEEEEEE--TTE--E-EEEECHHHHHHTTC--------C-
T ss_pred cCCCHHHHHHHHHHHhcCCCCCCc----cceeecC----CCEEEEEE--CCE--E-EEEecHHHHHHcCC--------C-
Confidence 134788899999988877643211 1111110 01111111 111 1 11233322221111 0
Q ss_pred ccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCC
Q 043305 465 QMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAG 544 (892)
Q Consensus 465 ~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AG 544 (892)
. ...+.++..++.+.+.+++ +..++|.+.+.|+++|++.++++.|++.|
T Consensus 112 -~--------~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g 160 (280)
T 3skx_A 112 -T--------DESVEKLKQQGKTVVFILK----------------------NGEVSGVIALADRIRPESREAISKLKAIG 160 (280)
T ss_dssp -C--------CTTHHHHHTTTCEEEEEEE----------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTT
T ss_pred -c--------hHHHHHHHhCCCeEEEEEE----------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCC
Confidence 0 1224456777888877764 23688999999999999999999999999
Q ss_pred CEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHH
Q 043305 545 VKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRK 624 (892)
Q Consensus 545 I~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~ 624 (892)
+++.++||++...+..+++.+|+. ..|....|.+|...++.+.+
T Consensus 161 ~~~~i~T~~~~~~~~~~~~~~gl~------------------------------------~~f~~~~~~~k~~~~k~~~~ 204 (280)
T 3skx_A 161 IKCMMLTGDNRFVAKWVAEELGLD------------------------------------DYFAEVLPHEKAEKVKEVQQ 204 (280)
T ss_dssp CEEEEECSSCHHHHHHHHHHHTCS------------------------------------EEECSCCGGGHHHHHHHHHT
T ss_pred CEEEEEeCCCHHHHHHHHHHcCCh------------------------------------hHhHhcCHHHHHHHHHHHHh
Confidence 999999999999999999999985 35667778999999999988
Q ss_pred cCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 625 RGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLT 698 (892)
Q Consensus 625 ~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt 698 (892)
.. .++|+||+.||.+|++.|++|++|| ++++.+++.||+++..+++..+.++++.+|.++.++++++.|.+.
T Consensus 205 ~~-~~~~vGD~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 205 KY-VTAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp TS-CEEEEECTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred cC-CEEEEeCCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 76 4589999999999999999999999 789999999999999999999999999999999999999888764
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-22 Score=201.32 Aligned_cols=134 Identities=20% Similarity=0.264 Sum_probs=114.6
Q ss_pred cCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccc
Q 043305 386 SGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQ 465 (892)
Q Consensus 386 ~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~ 465 (892)
.+||+|.||++++...+ ....+.++++++.+||||+||||+++++.+++++++++|||||.||++|+.+. .+|+.+|
T Consensus 32 ~~n~~d~Ail~~~~~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~-~~g~~~~ 108 (170)
T 3gwi_A 32 LKNLLDTAVLEGTDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVR-HNGEIVP 108 (170)
T ss_dssp CCCHHHHHHHHTSCHHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEE-ETTEEEE
T ss_pred CCChHHHHHHHHHHhcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHh-cCCCccc
Confidence 37999999999876533 34567789999999999999999999987777889999999999999999875 4888999
Q ss_pred cCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCC
Q 043305 466 MDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDP 528 (892)
Q Consensus 466 l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~Dp 528 (892)
++++.++.+.+.+++|+++|+||||+|||+++...... ....|+||+|+|++|+-|.
T Consensus 109 l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~------~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 109 LDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDY------QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCC------CGGGSCSEEEEEEEEEEC-
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcccc------CccccCCcEEEehhccccc
Confidence 99999999999999999999999999999997542110 1125899999999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-20 Score=204.67 Aligned_cols=147 Identities=14% Similarity=0.118 Sum_probs=115.8
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceE
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMIC 605 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~ 605 (892)
.+|+|||++++++.|+++|++|.|+|||+..+++++|+++|+..++. .++. ..+ ..+++++...+. ...+.
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~-----~i~~-n~l-~~~~~~~~~~~~--~~~i~ 209 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV-----KVVS-NFM-DFDENGVLKGFK--GELIH 209 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTE-----EEEE-ECE-EECTTSBEEEEC--SSCCC
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccc-----eEEe-eeE-EEcccceeEecc--ccccc
Confidence 57999999999999999999999999999999999999999975432 1110 000 011111000000 01335
Q ss_pred EEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhh---cCCeeEeecC------CCcHhhhhcccEEEcCCCchHHH
Q 043305 606 VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALH---EADIGLAMGI------QGTEVAKESSDIIILDDNFASVV 676 (892)
Q Consensus 606 V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk---~AdVGIAmgi------~gt~vAkeaaDiil~ddnf~sIv 676 (892)
++++..|.+|...+..+++.|+.|+|+|||+||+||++ .||+|||||. ++++++++++||||+||++.+++
T Consensus 210 ~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~ 289 (297)
T 4fe3_A 210 VFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVV 289 (297)
T ss_dssp TTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHH
T ss_pred hhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHH
Confidence 67888899999999999999999999999999999955 9999999996 67778899999999999999999
Q ss_pred HHHHH
Q 043305 677 KVVRW 681 (892)
Q Consensus 677 ~~i~~ 681 (892)
.+|.+
T Consensus 290 ~~il~ 294 (297)
T 4fe3_A 290 NSILQ 294 (297)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98853
|
| >4aqr_D Calcium-transporting ATPase 8, plasma membrane-TY; Ca-binding protein-hydrolase complex, plasma-membrane calciu; 1.95A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-15 Score=119.57 Aligned_cols=56 Identities=63% Similarity=0.906 Sum_probs=54.0
Q ss_pred CchHHhHHHHHHhhhhcccccccccccchhHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 043305 41 APIVRLKRWRQAALVLNASRRFRYTLDLKKEEEKLQTLRKIRAHAQAIRAAVLFKE 96 (892)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (892)
+|.|+++|||+|++|+||+||||||+||+|+++++++.+|+|++.+|++|+++|++
T Consensus 1 ~s~e~L~rWR~a~lVlNa~RRFR~t~dL~K~~e~~~~~rkiR~~~~v~rAa~~F~~ 56 (57)
T 4aqr_D 1 SSIERLQQWRKAALVLNASRRFRYTLDLKKEQETREMRQKIRSHAHALLAANRFMD 56 (57)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhchHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 47899999999999999999999999999999999999999999999999999985
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.39 E-value=3.1e-13 Score=137.45 Aligned_cols=137 Identities=16% Similarity=0.218 Sum_probs=112.2
Q ss_pred EEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhc
Q 043305 519 LLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAG 598 (892)
Q Consensus 519 ~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~ 598 (892)
.++.++++|.. +++.|+++|+++.++||++...+..+++++||..
T Consensus 43 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~----------------------------- 87 (189)
T 3mn1_A 43 EIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH----------------------------- 87 (189)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE-----------------------------
T ss_pred EeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH-----------------------------
Confidence 45555555443 9999999999999999999999999999999862
Q ss_pred ccccceEEEeccCHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC---
Q 043305 599 EDFGMICVMGRSSPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN--- 671 (892)
Q Consensus 599 ~~~~~~~V~aR~sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn--- 671 (892)
+|... .+|...++.+.++ .+.++|+||+.||.+|++.|++|++|+ ++.+.+++.||+++.+++
T Consensus 88 -------~f~~~--~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G 157 (189)
T 3mn1_A 88 -------LFQGR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEG 157 (189)
T ss_dssp -------EECSC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTT
T ss_pred -------HhcCc--CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCc
Confidence 11111 4566777666654 478999999999999999999999999 789999999999998764
Q ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 672 -FASVVKVVRWGRSVYANIQKFIQFQLTVN 700 (892)
Q Consensus 672 -f~sIv~~i~~GR~v~~nI~k~i~f~lt~N 700 (892)
+..+.+.+...|..+++|++++.|.+.+|
T Consensus 158 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 158 AAREFCELILSAQGNLEAAHSVYLEGHHHH 187 (189)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHTTSTTC---
T ss_pred HHHHHHHHHHHccCcHHHHHHHHhcccccc
Confidence 67788888999999999999999998887
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.23 E-value=8.4e-12 Score=137.97 Aligned_cols=156 Identities=15% Similarity=0.144 Sum_probs=109.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
|++|++.+.++.|+++|+++.++||+....+..+++++|+...... ...+.+|. +... +. ...+.
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~--~l~~~d~~-~tg~--------~~----~~~~~ 242 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSN--TLEIVSGK-LTGQ--------VL----GEVVS 242 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETTE-EEEE--------EE----SCCCC
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEee--eeEeeCCe-eeee--------ec----ccccC
Confidence 7899999999999999999999999999999999999999631110 00000000 0000 00 00011
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYA 687 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~ 687 (892)
++..|+-...+.+.+.-..+.+.++|||.||.+|++.|++|++| ++.+..++.||.++..+++..|..++.......+
T Consensus 243 ~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~ 320 (335)
T 3n28_A 243 AQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQ 320 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhh
Confidence 22233334444444443457899999999999999999999999 7899999999999999999999999988877777
Q ss_pred HHHHHHHHHHHHH
Q 043305 688 NIQKFIQFQLTVN 700 (892)
Q Consensus 688 nI~k~i~f~lt~N 700 (892)
+|+.++.|..++|
T Consensus 321 r~~~~~~~~~~~~ 333 (335)
T 3n28_A 321 KLSWKSKEGHHHH 333 (335)
T ss_dssp CCCCC--------
T ss_pred hhccccccccccc
Confidence 8888888887776
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.21 E-value=5.8e-11 Score=124.15 Aligned_cols=151 Identities=17% Similarity=0.146 Sum_probs=110.0
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCcee--cchhh-hh----------------
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNII--EGKSF-RA---------------- 587 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi--~G~~~-~~---------------- 587 (892)
..+.+++.++|++|+++|+++.++||+....+..+++++|+..+-...+++.+. +|+.+ ..
T Consensus 21 ~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~ 100 (227)
T 1l6r_A 21 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 100 (227)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999999999986422112222232 23222 00
Q ss_pred ---------------------cCHHHHHHHhcccccceEEEe-----ccCH--hhHHHHHHHHHHc----CCeEEEeCCC
Q 043305 588 ---------------------LSETQREEIAGEDFGMICVMG-----RSSP--SDKLLLVQALRKR----GDVVAVTGDG 635 (892)
Q Consensus 588 ---------------------l~~~e~~~i~~~~~~~~~V~a-----R~sP--~dK~~lV~~Lq~~----g~vVa~tGDG 635 (892)
-+++++.++... + .+.+.. ...| .+|...++.+.+. .+.|.++||+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~ 178 (227)
T 1l6r_A 101 SMRSILTNRWREASTGFDIDPEDVDYVRKEAES-R-GFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDS 178 (227)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHT-T-TEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCS
T ss_pred cCCccccccceecccceEEecCCHHHHHHHHHh-c-CEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCc
Confidence 012233333221 1 233321 1124 6899999888764 3579999999
Q ss_pred CCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 636 TNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 636 ~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
.||.+|++.|++|++|| ++.+..|+.||+++.+++-.++.++++
T Consensus 179 ~nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 179 NNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HHhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 99999999999999999 889999999999998888888888875
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-10 Score=117.19 Aligned_cols=133 Identities=17% Similarity=0.164 Sum_probs=105.9
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEe
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMG 608 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~a 608 (892)
+.++..++++.|+++|+++.++||++...+..+++++|+... |.
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~------------------------------------~~ 79 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF------------------------------------FL 79 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE------------------------------------EE
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCcee------------------------------------ec
Confidence 456778999999999999999999999999999999998621 11
Q ss_pred ccCHhhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHH----HHHH
Q 043305 609 RSSPSDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVV----KVVR 680 (892)
Q Consensus 609 R~sP~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv----~~i~ 680 (892)
. ...|...++.+.++ | +.|+++||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++..+++ +.+.
T Consensus 80 ~--~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l 156 (180)
T 1k1e_A 80 G--KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMIL 156 (180)
T ss_dssp S--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHH
T ss_pred C--CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHH
Confidence 1 13456666555443 4 68999999999999999999999998 88899999999999887665555 4445
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 043305 681 WGRSVYANIQKFIQFQLTVN 700 (892)
Q Consensus 681 ~GR~v~~nI~k~i~f~lt~N 700 (892)
..|..|+++++.+.|..+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~ 176 (180)
T 1k1e_A 157 QAQGKSSVFDTAQGFLKSVK 176 (180)
T ss_dssp HHTTCTHHHHCHHHHHHHGG
T ss_pred HhcCchhhhhhccchhhhhc
Confidence 56777888888887776653
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.05 E-value=1.4e-10 Score=117.95 Aligned_cols=126 Identities=17% Similarity=0.160 Sum_probs=100.3
Q ss_pred HHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhH
Q 043305 536 AIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDK 615 (892)
Q Consensus 536 aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK 615 (892)
+++.|+++|+++.++||+....+..+++++|+... +.+ ....|+-.
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~---------~~~-------------------------~kpk~~~~ 99 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHY---------YKG-------------------------QVDKRSAY 99 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEE---------ECS-------------------------CSSCHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccc---------eeC-------------------------CCChHHHH
Confidence 69999999999999999999999999999998621 110 02345555
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC----chHHHHHHHHHHHHHHHHHH
Q 043305 616 LLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN----FASVVKVVRWGRSVYANIQK 691 (892)
Q Consensus 616 ~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn----f~sIv~~i~~GR~v~~nI~k 691 (892)
..+++.+.-..+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++ +..+.+.+...|..|+++.+
T Consensus 100 ~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~ 178 (191)
T 3n1u_A 100 QHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAIT 178 (191)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHH
Confidence 5666665555678999999999999999999999998 888999999999999877 55566666677888877666
Q ss_pred HHHHH
Q 043305 692 FIQFQ 696 (892)
Q Consensus 692 ~i~f~ 696 (892)
...+|
T Consensus 179 ~~~~~ 183 (191)
T 3n1u_A 179 GYLKQ 183 (191)
T ss_dssp HHHTC
T ss_pred HHHhc
Confidence 55443
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.04 E-value=8.6e-11 Score=120.21 Aligned_cols=113 Identities=14% Similarity=0.220 Sum_probs=89.1
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhh
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSD 614 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~d 614 (892)
.+|+.|+++|+++.++||++...+..+++++||.. +|... ..
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------------------------~~~~~--k~ 100 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------------------------IYQGQ--DD 100 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------------------------EECSC--SS
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------------------------EeeCC--CC
Confidence 46999999999999999999999999999999862 12222 35
Q ss_pred HHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchH----HHHHHHHHHHHH
Q 043305 615 KLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFAS----VVKVVRWGRSVY 686 (892)
Q Consensus 615 K~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~s----Iv~~i~~GR~v~ 686 (892)
|...++.+.++ .+.|+++||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++-.+ +.+.+...|..|
T Consensus 101 k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~~~ 179 (195)
T 3n07_A 101 KVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNEL 179 (195)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTTSS
T ss_pred cHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcccH
Confidence 66666655543 467999999999999999999999999 899999999999998766444 444444444433
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.02 E-value=6.2e-10 Score=115.26 Aligned_cols=107 Identities=20% Similarity=0.250 Sum_probs=88.4
Q ss_pred HHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhH
Q 043305 536 AIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDK 615 (892)
Q Consensus 536 aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK 615 (892)
+++.|+++|+++.++||++...+..+++++||.. +|... .+|
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~------------------------------------~f~~~--k~K 125 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH------------------------------------LYQGQ--SDK 125 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------------EECSC--SSH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch------------------------------------hhccc--CCh
Confidence 9999999999999999999999999999999962 22222 467
Q ss_pred HHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC----chHHHHHHHH
Q 043305 616 LLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN----FASVVKVVRW 681 (892)
Q Consensus 616 ~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn----f~sIv~~i~~ 681 (892)
...++.+.++ .+.|+|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++ +..+.+.+..
T Consensus 126 ~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll~ 198 (211)
T 3ij5_A 126 LVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRGAVREVCDLILL 198 (211)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCcHHHHHHHHHHH
Confidence 7777776654 578999999999999999999999999 788999999999998764 3444444443
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.01 E-value=8.1e-10 Score=110.74 Aligned_cols=104 Identities=15% Similarity=0.193 Sum_probs=87.4
Q ss_pred HHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhH
Q 043305 536 AIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDK 615 (892)
Q Consensus 536 aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK 615 (892)
+++.|+++|+++.++||++...+..+++++||. +++.. ..|
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------------------------------------~~~~~--~~k 87 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------------------------------------VLHGI--DRK 87 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------------------------------------EEESC--SCH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------------------------------------eEeCC--CCh
Confidence 899999999999999999999999999999984 11111 456
Q ss_pred HHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 616 LLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 616 ~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
...++.+.++ .+.+.++||+.||.+|++.|++|++|+ ++++.+++.||+++.+++..+++..+
T Consensus 88 ~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 88 DLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 6666666554 367999999999999999999999999 78999999999999988866665554
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=3.3e-10 Score=111.47 Aligned_cols=117 Identities=22% Similarity=0.206 Sum_probs=90.6
Q ss_pred HHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhH
Q 043305 536 AIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDK 615 (892)
Q Consensus 536 aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK 615 (892)
+++.|+++|+++.++||++...+..+++++|+... +... ..|
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~------------------------------------~~~~--kpk 80 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL------------------------------------FQGV--VDK 80 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE------------------------------------ECSC--SCH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe------------------------------------eccc--CCh
Confidence 89999999999999999999999999999998631 1111 234
Q ss_pred HHHHHHHHH----cCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC----chHHHHHHHHHHHHHH
Q 043305 616 LLLVQALRK----RGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN----FASVVKVVRWGRSVYA 687 (892)
Q Consensus 616 ~~lV~~Lq~----~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn----f~sIv~~i~~GR~v~~ 687 (892)
...++.+.+ ..+.++|+||+.||.+|++.|+++++++ ++.+.+++.||+++.+++ +..+.+.+. +..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll--~~~~~ 157 (164)
T 3e8m_A 81 LSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFVEKVL--GINLE 157 (164)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHHHHHT--TCCHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHHHHHH--ccCch
Confidence 444444433 2468999999999999999999999998 899999999999999988 444554444 44455
Q ss_pred HHHHHH
Q 043305 688 NIQKFI 693 (892)
Q Consensus 688 nI~k~i 693 (892)
.+.+++
T Consensus 158 ~~~~~~ 163 (164)
T 3e8m_A 158 DFIAVI 163 (164)
T ss_dssp HHHHHT
T ss_pred hhHHhh
Confidence 555544
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.97 E-value=6e-10 Score=111.26 Aligned_cols=112 Identities=20% Similarity=0.193 Sum_probs=89.6
Q ss_pred cEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHH--HcCCCCCcCCCCCCceecchhhhhcCHHHHH
Q 043305 517 LVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIAL--ECGILTSEADATEPNIIEGKSFRALSETQRE 594 (892)
Q Consensus 517 l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~--~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~ 594 (892)
-..++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+||.
T Consensus 31 g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-------------------------- 76 (168)
T 3ewi_A 31 QKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-------------------------- 76 (168)
T ss_dssp CCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC--------------------------
T ss_pred CCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE--------------------------
Confidence 356777777776 3899999999999999999 77888888 55552
Q ss_pred HHhcccccceEEEeccCHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCC
Q 043305 595 EIAGEDFGMICVMGRSSPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDD 670 (892)
Q Consensus 595 ~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~dd 670 (892)
++. .+.+|...++.+.++ .+.++++||+.||.+|++.|+++++|+ ++.+.+++.||+++.++
T Consensus 77 -----------~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~ 142 (168)
T 3ewi_A 77 -----------TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCS 142 (168)
T ss_dssp -----------EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSC
T ss_pred -----------EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCC
Confidence 111 124677777777664 367999999999999999999999998 89999999999999876
Q ss_pred CchHHH
Q 043305 671 NFASVV 676 (892)
Q Consensus 671 nf~sIv 676 (892)
+=.+++
T Consensus 143 ~~~G~~ 148 (168)
T 3ewi_A 143 GGRGAI 148 (168)
T ss_dssp TTTTHH
T ss_pred CCccHH
Confidence 655533
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.85 E-value=1.3e-08 Score=109.11 Aligned_cols=68 Identities=21% Similarity=0.257 Sum_probs=59.2
Q ss_pred hhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 613 SDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 613 ~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
.+|...++.+.++ .+.|+++||+.||.+|++.|++|+||| ++.+..|+.||+|..+++-.+|.++|++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 4588888777664 356999999999999999999999999 9999999999999988888889888863
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.83 E-value=1.2e-09 Score=120.70 Aligned_cols=155 Identities=16% Similarity=0.175 Sum_probs=103.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecch------------------hhhhcC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGK------------------SFRALS 589 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~------------------~~~~l~ 589 (892)
++++++.+.++.|++ |+.+.++||++...+..+.+.+|+..... ...+... .+....
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 177 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELH----GTEVDFDSIAVPEGLREELLSIIDVIASLSG 177 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEE----EEBCCGGGCCCCHHHHHHHHHHHHHHHHCCH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhc----ccccchhhhccccccceeEEecCHHHHhhhh
Confidence 568999999999999 99999999999777777888888742110 0000000 000000
Q ss_pred HHHHHHHhcccc--cc-eEEE---eccCHhhHHHHHHHHHHcC--CeEEEeCCCCCChHhhhcC----CeeEeecCCCcH
Q 043305 590 ETQREEIAGEDF--GM-ICVM---GRSSPSDKLLLVQALRKRG--DVVAVTGDGTNDAPALHEA----DIGLAMGIQGTE 657 (892)
Q Consensus 590 ~~e~~~i~~~~~--~~-~~V~---aR~sP~dK~~lV~~Lq~~g--~vVa~tGDG~NDapALk~A----dVGIAmgi~gt~ 657 (892)
++++ +.+++.. .. -.+. --..+.+|...++.+.... ++|+++|||.||.+|++.| ++|||| ++.+
T Consensus 178 ~~~l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~ 254 (332)
T 1y8a_A 178 EELF-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNE 254 (332)
T ss_dssp HHHH-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCH
T ss_pred HHHH-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCH
Confidence 1122 1111000 00 0000 0123567998888776543 5699999999999999999 999999 7899
Q ss_pred hhhhcccEEEcCCCchHHHHHH----HHHHHHHHHHHH
Q 043305 658 VAKESSDIIILDDNFASVVKVV----RWGRSVYANIQK 691 (892)
Q Consensus 658 vAkeaaDiil~ddnf~sIv~~i----~~GR~v~~nI~k 691 (892)
.+|+.||+++.+++...+..++ ..||..+ |+-|
T Consensus 255 ~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~ 291 (332)
T 1y8a_A 255 YALKHADVVIISPTAMSEAKVIELFMERKERAF-EVLS 291 (332)
T ss_dssp HHHTTCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGG
T ss_pred HHHhhCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHH
Confidence 9999999999988887777765 4577666 5544
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.82 E-value=2e-08 Score=107.18 Aligned_cols=67 Identities=31% Similarity=0.466 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 614 DKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 614 dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
+|...++.+.++ .+.|+++||+.||.+|++.|++|+||| ++.+.+|++||+|+.+++-.+|.++|++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 788888777664 356999999999999999999999999 8999999999999988888888888853
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.6e-08 Score=108.73 Aligned_cols=67 Identities=27% Similarity=0.271 Sum_probs=56.7
Q ss_pred hhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccE--EEcCCCchHHHHHHH
Q 043305 613 SDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDI--IILDDNFASVVKVVR 680 (892)
Q Consensus 613 ~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDi--il~ddnf~sIv~~i~ 680 (892)
.+|...++.+.+. | +.|+++||+.||.+|++.|++|+||| ++.+..|++||. +..+++=.+|.++|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 4588888877664 3 57999999999999999999999999 999999999984 666667778888775
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.80 E-value=2.3e-08 Score=107.48 Aligned_cols=67 Identities=22% Similarity=0.219 Sum_probs=59.2
Q ss_pred hhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 613 SDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 613 ~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
.+|...++.+.+. | +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+|..+++=.+|.++|+
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 3588888887764 3 56999999999999999999999999 999999999999999888888988875
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.78 E-value=1e-08 Score=104.15 Aligned_cols=135 Identities=17% Similarity=0.115 Sum_probs=97.5
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
-+++|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. .++...+ . .....+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~-----~~~~~~~-------------~--~~~~~~ 133 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFS-----NTLIVEN-------------D--ALNGLV 133 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE-----EEEEEET-------------T--EEEEEE
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcc-----ceeEEeC-------------C--EEEeee
Confidence 3689999999999999999999999999999999999999863211 1110000 0 000001
Q ss_pred Eec-cCHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 607 MGR-SSPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 607 ~aR-~sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
... ..+..|..+++.+.++ .+.+.++||+.||.+|++.|+++++| ++.+..++.||+++.+++++.+..++.|
T Consensus 134 ~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 134 TGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp EESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred ccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 111 1234566666655543 36789999999999999999999999 6788889999999999999999988877
Q ss_pred HH
Q 043305 682 GR 683 (892)
Q Consensus 682 GR 683 (892)
-.
T Consensus 212 ~~ 213 (217)
T 3m1y_A 212 HH 213 (217)
T ss_dssp --
T ss_pred cc
Confidence 43
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.9e-08 Score=114.43 Aligned_cols=139 Identities=21% Similarity=0.282 Sum_probs=107.5
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCc-eecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPN-IIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~-vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
+++||+.+.++.|++.|+++.++||.....+..+++.+|+..... ..+ +.+|. + .-.+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~---~~l~~~dg~-~-----------------tg~~ 314 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAA---NELEIVDGT-L-----------------TGRV 314 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEE---ECEEEETTE-E-----------------EEEE
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceee---eeEEEeCCE-E-----------------EeeE
Confidence 789999999999999999999999999999999999999953110 000 01110 0 0001
Q ss_pred Ee-ccCHhhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 607 MG-RSSPSDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 607 ~a-R~sP~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
.. -..+..|..+++.+.++ | +.+.++|||.||.+|++.|++|+++ ++.+..++.||+++..+++..+..++.+
T Consensus 315 ~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~ 392 (415)
T 3p96_A 315 VGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGV 392 (415)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTC
T ss_pred ccCCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCC
Confidence 10 12356777777766654 3 5799999999999999999999999 5788889999999999999999999988
Q ss_pred HHHHHHHH
Q 043305 682 GRSVYANI 689 (892)
Q Consensus 682 GR~v~~nI 689 (892)
+|.-+.+.
T Consensus 393 ~~~~~~~~ 400 (415)
T 3p96_A 393 TRGEIEAA 400 (415)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHh
Confidence 88766554
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.76 E-value=1.6e-08 Score=107.82 Aligned_cols=66 Identities=27% Similarity=0.371 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+|...++.+.+. .+.|.++||+.||.+|++.|++|+||| ++.+..|+.||+|..+++=.+|.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHH
Confidence 488888877664 356999999999999999999999999 899999999999998877788888874
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.76 E-value=2.3e-08 Score=105.63 Aligned_cols=66 Identities=23% Similarity=0.260 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+|..-++.+.+. .+.|+++||+.||.+|++.|++|+||| ++.+..|+.||+|..+.+-.++.++++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 466667776653 357999999999999999999999999 899999999999998888888988875
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.74 E-value=4.1e-08 Score=102.31 Aligned_cols=152 Identities=20% Similarity=0.191 Sum_probs=103.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceec-chh---------------hh-----
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIE-GKS---------------FR----- 586 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~-G~~---------------~~----- 586 (892)
.+.+.+.+++++++++|+++.++||.....+..+.+.+|+..+....+++.+.. |+. ++
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~ 99 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 99 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCC
Confidence 467889999999999999999999999999999999999753211111111111 110 00
Q ss_pred -------------------hcCHHHHHHHhcccccceEEEe-----cc--CHhhHHHHHHHHHHc----CCeEEEeCCCC
Q 043305 587 -------------------ALSETQREEIAGEDFGMICVMG-----RS--SPSDKLLLVQALRKR----GDVVAVTGDGT 636 (892)
Q Consensus 587 -------------------~l~~~e~~~i~~~~~~~~~V~a-----R~--sP~dK~~lV~~Lq~~----g~vVa~tGDG~ 636 (892)
....+..++++......+.+.+ .. ....|...++.+.++ .+.|.++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~ 179 (231)
T 1wr8_A 100 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 179 (231)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 0023333333321111223321 11 124688888877654 35689999999
Q ss_pred CChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 637 NDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 637 NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
||.+|++.|++|++|| ++.+..|+.||+++.+.+-.++.++++
T Consensus 180 nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 180 NDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 9999999999999999 788888999999988766667777775
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.74 E-value=2e-08 Score=106.52 Aligned_cols=68 Identities=22% Similarity=0.240 Sum_probs=59.2
Q ss_pred hhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 613 SDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 613 ~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
.+|...++.+.++ .+.++++||+.||.+|++.|++|+||| ++.+..|+.||+++.+.+=.+|.++|++
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 3588777777654 467999999999999999999999999 8999999999999998888889888853
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.9e-08 Score=107.83 Aligned_cols=68 Identities=26% Similarity=0.303 Sum_probs=59.4
Q ss_pred HhhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 612 PSDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 612 P~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+.+|...++.+.++ | +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+++=.++.++|+
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 35688888877664 3 56999999999999999999999999 999999999999998877888888886
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=4e-08 Score=98.89 Aligned_cols=128 Identities=21% Similarity=0.258 Sum_probs=90.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|+++++++.|++.|+++.++||+....+..+.+.+|+...-. ........ .+ .-.+.
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------------~~-----~~~~~ 135 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA---NRLIVKDG------------KL-----TGDVE 135 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE---EEEEEETT------------EE-----EEEEE
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEE---eeeEEECC------------EE-----cCCcc
Confidence 467899999999999999999999999998888888888742100 00001000 00 00111
Q ss_pred ec-cCHhhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHH
Q 043305 608 GR-SSPSDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVK 677 (892)
Q Consensus 608 aR-~sP~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~ 677 (892)
.. +.+..|...++.+.++ | +.+.++||+.||.+|++.|+++++|+ +.+..++.||+++.++++..+..
T Consensus 136 ~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 136 GEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp CSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred cCccCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 11 2245676666655443 3 56999999999999999999999997 55667888999998767776654
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.64 E-value=3.6e-08 Score=108.33 Aligned_cols=131 Identities=17% Similarity=0.216 Sum_probs=97.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++||+.+.++.|+++|+++.++||.....+..+++.+|+...-. ..+..++..+. -.+.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~---~~l~~~dg~~t-----------------g~i~ 238 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFS---NTVEIRDNVLT-----------------DNIT 238 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE---ECEEEETTEEE-----------------EEEC
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEE---EEEEeeCCeee-----------------eeEe
Confidence 489999999999999999999999999999999999999963211 00111110000 0011
Q ss_pred e-ccCHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 608 G-RSSPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 a-R~sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
. -..+..|..+++.+.++ .+.+.++||+.||.+|++.|++|++++ +.+..++.+|.++..+++..+..+++
T Consensus 239 ~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 239 LPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp SSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred cccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 1 11345666666555443 367999999999999999999999994 77888899999999889998887664
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.61 E-value=4.6e-08 Score=103.65 Aligned_cols=68 Identities=25% Similarity=0.378 Sum_probs=59.8
Q ss_pred hhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 613 SDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 613 ~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
.+|..-++.+.++ .+.|+++||+.||.+|++.|++|+||| ++.+.+|++||+|..+++=.+|.+++++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 4688888777664 356999999999999999999999999 9999999999999999888999988853
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.4e-07 Score=92.20 Aligned_cols=114 Identities=12% Similarity=0.140 Sum_probs=87.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
...+++.++++.|+++|+++.++||.+...+..+.+++|+.. .+++
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------~~~~------------------------- 81 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE---------IYTG------------------------- 81 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------EEEC-------------------------
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------hccC-------------------------
Confidence 346888999999999999999999999999999999999852 1111
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVV 676 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv 676 (892)
....|+--..+++.+.-..+.+.++||+.||.++.+.|+++++++ ++.+..++.||+++.+.+-.+++
T Consensus 82 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 82 SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHH
Confidence 111222222233333323467999999999999999999999987 77888888999999887766666
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.59 E-value=3.8e-08 Score=98.22 Aligned_cols=119 Identities=24% Similarity=0.359 Sum_probs=90.3
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++|++.+.++.|++.|+++.++|+++...+..+ +.+|+... . ........ ...-
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~---~~~~~~~~-------------------~~~~- 133 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-A---NRAIFEDG-------------------KFQG- 133 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-E---EEEEEETT-------------------EEEE-
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-e---eeEEeeCC-------------------ceEC-
Confidence 7899999999999999999999999998888888 88887421 0 00000100 0000
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
....|..|...++.+ ..+.+.++||+.||.+|++.|++|++|+ ++.+ .||+++.+ +..+.++++
T Consensus 134 ~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~~--~~el~~~l~ 197 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVKD--LKELVDFIK 197 (201)
T ss_dssp EECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEESS--HHHHHHHHH
T ss_pred CcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEcc--HHHHHHHHH
Confidence 345677899999888 5567889999999999999999999999 5555 78999864 777766654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=1e-07 Score=96.27 Aligned_cols=107 Identities=20% Similarity=0.273 Sum_probs=84.4
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhh
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSD 614 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~d 614 (892)
.+++.|+++|+++.++||++...+..+++++|+.. +|... ..
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~------------------------------------~~~~~--kp 101 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH------------------------------------LYQGQ--SN 101 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------------EECSC--SC
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce------------------------------------eecCC--CC
Confidence 48999999999999999999999999999999862 11111 23
Q ss_pred HHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHH-HHHH
Q 043305 615 KLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVV-KVVR 680 (892)
Q Consensus 615 K~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv-~~i~ 680 (892)
|...++.+.++ | +.++++||+.||.++++.|+++++++ ++.+.+++.||+++.+.+-.+++ ++++
T Consensus 102 k~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 102 KLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 44444444332 4 67999999999999999999999998 67888888999999887666666 4443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.54 E-value=1.6e-07 Score=100.92 Aligned_cols=66 Identities=20% Similarity=0.253 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+|...++.+.+. .+.++++||+.||.+|++.|++|++|| ++.+..|+.||+++.+.+-.++.++++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 788888888764 357999999999999999999999999 888889999999998877788888775
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.45 E-value=2.7e-07 Score=94.94 Aligned_cols=129 Identities=26% Similarity=0.347 Sum_probs=94.3
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.... .
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~--------------------~ 158 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL-----TVIAGDDSVE--------------------R 158 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC-----SEEECTTTSS--------------------S
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe-----eeEEeCCCCC--------------------C
Confidence 46789999999999999999999999999999999999985321 1223222110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe---eEeecCCCcHhhhh-cccEEEcCCCchHHHHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI---GLAMGIQGTEVAKE-SSDIIILDDNFASVVKVVRWGR 683 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV---GIAmgi~gt~vAke-aaDiil~ddnf~sIv~~i~~GR 683 (892)
....|+--..+.+.+.-..+.+.++||+.||..|++.|++ +++||.+..+..++ .+|+++.+ +..+.++++.|+
T Consensus 159 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l~~~~ 236 (237)
T 4ex6_A 159 GKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDS--FPAAVTAVLDGH 236 (237)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESS--HHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECC--HHHHHHHHHccC
Confidence 1123343444555554445779999999999999999999 99999544355454 89999854 999988887654
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.40 E-value=6.9e-07 Score=97.16 Aligned_cols=66 Identities=26% Similarity=0.347 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEc-CCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIIL-DDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~-ddnf~sIv~~i~ 680 (892)
+|...++.+.+. | +.|+++||+.||.+|++.|++|++|| ++.+..|+.||+++. +.+-.+|.++|+
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 788888887764 2 46899999999999999999999999 888889999999998 877888888875
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.38 E-value=1.4e-06 Score=87.92 Aligned_cols=129 Identities=15% Similarity=0.095 Sum_probs=94.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-. ..++.+.+. .....
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~----~~~~~~~~~-----------------~~~~~ 126 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLC----HKLEIDDSD-----------------RVVGY 126 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEE----EEEEECTTS-----------------CEEEE
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceec----ceeEEcCCc-----------------eEEee
Confidence 5799999999999999 9999999999999999999999863210 011111100 00111
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
-...|+.|...++.+....+.+.++||+.||.+|.+.|+++++++ ...+..+.+.+++. -+++..+..++.
T Consensus 127 ~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~l~ 197 (206)
T 1rku_A 127 QLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPA-VHTYEDLKREFL 197 (206)
T ss_dssp ECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCE-ECSHHHHHHHHH
T ss_pred ecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC-CcHHHHHHHhhhcc-ccchHHHHHHHH
Confidence 125688999999999888889999999999999999999999985 33344334455542 246888877663
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.38 E-value=4.7e-07 Score=91.22 Aligned_cols=131 Identities=14% Similarity=0.075 Sum_probs=88.8
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEe
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMG 608 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~a 608 (892)
++|++.+.++.|++.|+++.++|+.....+..+.+.+|+....... ...+..+... . .-....
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~-----~~~~~~ 145 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFA-VETIWNSDGS-----------F-----KELDNS 145 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEE-EEEEECTTSB-----------E-----EEEECT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEE-eeeeecCCCc-----------e-----eccCCC
Confidence 7899999999999999999999999999999999999985311000 0011100000 0 001122
Q ss_pred ccCHhhHHHHHHHH-HHcCCeEEEeCCCCCChHhhhc----CCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 609 RSSPSDKLLLVQAL-RKRGDVVAVTGDGTNDAPALHE----ADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 609 R~sP~dK~~lV~~L-q~~g~vVa~tGDG~NDapALk~----AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
..+|..|...+..+ .-..+.+.++||+.||.+|++. +.||++|+ +..+..++.||+++.+ +..+.+++
T Consensus 146 ~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~~--~~el~~~l 218 (219)
T 3kd3_A 146 NGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVARN--VAELASLI 218 (219)
T ss_dssp TSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEESS--HHHHHHHH
T ss_pred CCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeCC--HHHHHHhh
Confidence 34566676666544 3356789999999999999975 34555555 4567788899999864 77666543
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-06 Score=93.34 Aligned_cols=66 Identities=36% Similarity=0.451 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+|...++.+.+. .+.++++||+.||.+|++.|++|++|| ++.+..|+.||+++.+.+-.++.++++
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 788888877664 356899999999999999999999999 788888999999998877888888774
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=3.9e-07 Score=92.05 Aligned_cols=129 Identities=16% Similarity=0.125 Sum_probs=92.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. ...++.+.. ..
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---~~~i~~~~~---------------------~~ 125 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFA---EADVLGRDE---------------------AP 125 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSC---GGGEECTTT---------------------SC
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcC---cceEEeCCC---------------------CC
Confidence 457899999999999999999999999999999999999853210 011221111 00
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe-eEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI-GLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGR 683 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV-GIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR 683 (892)
....|+--..+.+.+.-..+.+.++||+.||..|.+.|++ +|+|+ ++.+..++.||+++.+ +..+...++..|
T Consensus 126 ~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~~--~~el~~~~~~~~ 199 (205)
T 3m9l_A 126 PKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHARD--CAQLRDLLSAEG 199 (205)
T ss_dssp CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECSS--HHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeCC--HHHHHHHHHhcc
Confidence 1112222233333333234679999999999999999999 99999 7777778889999864 888888876543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.30 E-value=6.6e-07 Score=93.88 Aligned_cols=142 Identities=13% Similarity=0.086 Sum_probs=90.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCcee-cchh------h--hhcCHHH------
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNII-EGKS------F--RALSETQ------ 592 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi-~G~~------~--~~l~~~e------ 592 (892)
.+.+.+.++|++++++| +|.++||.....+..+.+++ + +-...+++.+. +|+. + ..++.+.
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~--~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 98 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-I--NMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRS 98 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-C--EEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-h--heEEECCEEEeeCCeeeecccccccchhhHHHHHHHHH
Confidence 46789999999999999 99999999999998887665 1 10111111111 1111 0 0011111
Q ss_pred ----------------------------------HHHHhcccccceEEEe-----ccCH--hhHHHHHHHHHHcCCeEEE
Q 043305 593 ----------------------------------REEIAGEDFGMICVMG-----RSSP--SDKLLLVQALRKRGDVVAV 631 (892)
Q Consensus 593 ----------------------------------~~~i~~~~~~~~~V~a-----R~sP--~dK~~lV~~Lq~~g~vVa~ 631 (892)
+.+.+.+. ..+.+.. ...| .+|..-++.|.+.-. |++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via 176 (239)
T 1u02_A 99 WVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARI-FGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AII 176 (239)
T ss_dssp HHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHH-HTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEE
T ss_pred HHhhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhcc-CCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEE
Confidence 11111100 0122211 1122 378888888887633 889
Q ss_pred eCCCCCChHhhhcC--CeeEeecCCCcHhhhhcccEEEcC-CCchHHHHHHH
Q 043305 632 TGDGTNDAPALHEA--DIGLAMGIQGTEVAKESSDIIILD-DNFASVVKVVR 680 (892)
Q Consensus 632 tGDG~NDapALk~A--dVGIAmgi~gt~vAkeaaDiil~d-dnf~sIv~~i~ 680 (892)
+||+.||.+||+.| ++||||| ++ ++.||+++.+ .+-.++.++|+
T Consensus 177 ~GD~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 177 AGDDATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp EESSHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred EeCCCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHH
Confidence 99999999999999 9999999 65 7889999876 55666666664
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.29 E-value=3e-06 Score=91.03 Aligned_cols=66 Identities=29% Similarity=0.380 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+|...++.+.+. .+.++++||+.||.+|++.|++|++|| ++.+..|+.||+++.+.+-.++.++|+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHH
Confidence 566667777654 357999999999999999999999999 888889999999998877888888875
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.28 E-value=1.4e-06 Score=92.70 Aligned_cols=67 Identities=30% Similarity=0.345 Sum_probs=57.8
Q ss_pred hhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 613 SDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 613 ~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
.+|...++.+.++ | +.++++||+.||.+|++.|++|++|| ++.+..|+.||+++.+.+-.++.++++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 4788888877664 3 56999999999999999999999999 888889999999998877778888775
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=1.5e-06 Score=91.79 Aligned_cols=64 Identities=22% Similarity=0.246 Sum_probs=53.8
Q ss_pred hhHHHHHHHHHHc-C-----CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 613 SDKLLLVQALRKR-G-----DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 613 ~dK~~lV~~Lq~~-g-----~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
.+|...++.+.++ | +.|+++||+.||.+|++.|++|++|| ++.+ . .++++..+++-.++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5888888888775 3 78999999999999999999999999 7777 4 6788888777777777664
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.24 E-value=1.1e-06 Score=92.50 Aligned_cols=55 Identities=27% Similarity=0.199 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHHc-----CCeEEEeCCCCCChHhhhcCCeeEeecCCCc-HhhhhcccEEEc
Q 043305 613 SDKLLLVQALRKR-----GDVVAVTGDGTNDAPALHEADIGLAMGIQGT-EVAKESSDIIIL 668 (892)
Q Consensus 613 ~dK~~lV~~Lq~~-----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt-~vAkeaaDiil~ 668 (892)
.+|..-++.|.+. .+.|+++||+.||.+||+.|++|+||| ++. +..|+.||+++.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~ 238 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDV 238 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEec
Confidence 4688888877654 357999999999999999999999999 777 667788888754
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.24 E-value=1.5e-06 Score=88.39 Aligned_cols=126 Identities=11% Similarity=0.101 Sum_probs=88.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+..+.+..|+...-. .++.+.....
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~~-------------------- 140 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD-----AIVGSSLDGK-------------------- 140 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS-----EEEEECTTSS--------------------
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee-----eeeccCCCCC--------------------
Confidence 578999999999999999999999999999999999999863211 2222211100
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe---eEeecCCCcHh-hhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI---GLAMGIQGTEV-AKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV---GIAmgi~gt~v-AkeaaDiil~ddnf~sIv~~i~ 680 (892)
....|+--..+.+.+.-..+.+.++||+.||..|.+.|++ +++||....+. .+..+|+++.+ +..+.+++.
T Consensus 141 ~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s--~~el~~~~~ 215 (226)
T 3mc1_A 141 LSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNS--VDELHKKIL 215 (226)
T ss_dssp SCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESS--HHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECC--HHHHHHHHH
Confidence 0112222233333333334689999999999999999999 99998433333 36889999964 888887764
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.23 E-value=3.3e-06 Score=90.38 Aligned_cols=150 Identities=13% Similarity=0.048 Sum_probs=76.9
Q ss_pred chhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCC-CcCCCCCCcee-cc--h---h---h-hhcCHHHHHHHhc
Q 043305 530 RPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILT-SEADATEPNII-EG--K---S---F-RALSETQREEIAG 598 (892)
Q Consensus 530 R~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~-~~~~~~~~~vi-~G--~---~---~-~~l~~~e~~~i~~ 598 (892)
-+.+.++|++++++|+++.++||.....+..+.+++|+.. +-...+++.+. ++ + . + ..++.+...+++.
T Consensus 28 ~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 107 (275)
T 1xvi_A 28 WQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLN 107 (275)
T ss_dssp CCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHHHH
Confidence 3567999999999999999999999999999999999853 21112223332 21 1 0 0 0122111111000
Q ss_pred ---c----------------------------------ccc----------------------ceEEEe-----ccCH--
Q 043305 599 ---E----------------------------------DFG----------------------MICVMG-----RSSP-- 612 (892)
Q Consensus 599 ---~----------------------------------~~~----------------------~~~V~a-----R~sP-- 612 (892)
+ .+. .+.+.. ...|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~leI~~~~ 187 (275)
T 1xvi_A 108 TLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDAS 187 (275)
T ss_dssp HHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHHTTEEEEECSSCEEEEETT
T ss_pred HHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHhhCeEEEECCceEEEecCC
Confidence 0 000 011110 0111
Q ss_pred hhHHHHHHHHHHc-C----Ce--EEEeCCCCCChHhhhcCCeeEeecCCCc---Hhhhhc--cc-EEEcCCCchHHHHHH
Q 043305 613 SDKLLLVQALRKR-G----DV--VAVTGDGTNDAPALHEADIGLAMGIQGT---EVAKES--SD-IIILDDNFASVVKVV 679 (892)
Q Consensus 613 ~dK~~lV~~Lq~~-g----~v--Va~tGDG~NDapALk~AdVGIAmgi~gt---~vAkea--aD-iil~ddnf~sIv~~i 679 (892)
.+|...++.+.+. | +. ++++||+.||.+|++.|++|++|| ++. +..|+. || ++..+++-.++.++|
T Consensus 188 ~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l 266 (275)
T 1xvi_A 188 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREGL 266 (275)
T ss_dssp CCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC-----------------------------
T ss_pred CCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHHH
Confidence 2566666655432 3 35 899999999999999999999999 776 455543 78 888777777787777
Q ss_pred H
Q 043305 680 R 680 (892)
Q Consensus 680 ~ 680 (892)
+
T Consensus 267 ~ 267 (275)
T 1xvi_A 267 D 267 (275)
T ss_dssp -
T ss_pred H
Confidence 4
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=6.1e-06 Score=81.03 Aligned_cols=143 Identities=11% Similarity=0.202 Sum_probs=87.5
Q ss_pred CCCCcccCceEEEEEEeCCcccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHc-C
Q 043305 324 KTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKL-G 402 (892)
Q Consensus 324 KTGTLT~n~M~V~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~-g 402 (892)
..||+|-|...|+++...+. .++ .+++..+.+.. ..+.||...||++++++. |
T Consensus 13 ~~~tit~gnr~vt~v~~~~g----------~~e--~elL~lAAs~E--------------~~SeHPla~AIv~~A~~~~~ 66 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG----------VDE--KTLADAAQLAS--------------LADETPEGRSIVILAKQRFN 66 (156)
T ss_dssp --------CEEEEEEEECTT----------SCH--HHHHHHHHHTT--------------SSCCSHHHHHHHHHHHHHTT
T ss_pred CCCceecCCCeEEEEEecCC----------CCH--HHHHHHHHHHh--------------CcCCCHHHHHHHHHHHHhcC
Confidence 47999999999999875321 112 12333333221 124699999999999976 6
Q ss_pred CChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHH
Q 043305 403 MNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMA 482 (892)
Q Consensus 403 ~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a 482 (892)
........ ......||++..++.++.+ +| +-+.+|+++.|.+.+.. .|. .++ ..+.+.+++++
T Consensus 67 l~~~~~~~--~~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~~~i~~l~~~----~gi--~~~----~~~~~~~~~la 129 (156)
T 1svj_A 67 LRERDVQS--LHATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRRHVEA----NGG--HFP----TDVDQKVDQVA 129 (156)
T ss_dssp CCCCCHHH--HTCEEEEEETTTTEEEEEE---TT--EEEEEEEHHHHHHHHHH----HTC--CCC----HHHHHHHHHHH
T ss_pred CCcccccc--cccceeeccccCCCCeEEE---CC--EEEEEeCcHHHHHHHHH----cCC--CCc----HHHHHHHHHHH
Confidence 54322100 0133579999998788744 34 34678998766655432 111 122 13667788999
Q ss_pred hccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCch
Q 043305 483 SSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRP 531 (892)
Q Consensus 483 ~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~ 531 (892)
++|.+++.+|. |-.++|++++.|++||
T Consensus 130 ~~G~T~v~VA~----------------------d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 130 RQGATPLVVVE----------------------GSRVLGVIALKDIVKG 156 (156)
T ss_dssp HTTCEEEEEEE----------------------TTEEEEEEEEEECCCC
T ss_pred hCCCCEEEEEE----------------------CCEEEEEEEEecCCCC
Confidence 99999999994 3469999999999996
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.14 E-value=9e-06 Score=83.47 Aligned_cols=105 Identities=20% Similarity=0.126 Sum_probs=75.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++||+.+.++.|++.|+++.++||.....+..+++.+|+..--. .........+ .-.+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~-----------------~g~~~ 151 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIA---TDPEYRDGRY-----------------TGRIE 151 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEE---CEEEEETTEE-----------------EEEEE
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEE---cceEEECCEE-----------------eeeec
Confidence 479999999999999999999999999999999999999852100 0000000000 00111
Q ss_pred -eccCHhhHHHHHHHHHH-cC------CeEEEeCCCCCChHhhhcCCeeEeec
Q 043305 608 -GRSSPSDKLLLVQALRK-RG------DVVAVTGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 608 -aR~sP~dK~~lV~~Lq~-~g------~vVa~tGDG~NDapALk~AdVGIAmg 652 (892)
..+.+..|...++.+.+ .| +.+.++||+.||.+|++.|++++++.
T Consensus 152 ~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 152 GTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp SSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred CCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 12335677777765544 45 67999999999999999999999985
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.14 E-value=2.8e-06 Score=85.87 Aligned_cols=122 Identities=13% Similarity=0.180 Sum_probs=84.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.+++.+.++.+++.|+++.++|+.....+..+.+..|+...-. .++.+.... .
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~--------------------~ 148 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD-----ALASAEKLP--------------------Y 148 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----EEEECTTSS--------------------C
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc-----EEEeccccC--------------------C
Confidence 457899999999999999999999999988888888888753211 122211100 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee----cCCCcHhhhhcccEEEcCCCchHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM----GIQGTEVAKESSDIIILDDNFASVVK 677 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm----gi~gt~vAkeaaDiil~ddnf~sIv~ 677 (892)
....|+--..+.+.+.-..+.+.++||+.||.+|++.|+++++| + ++.+..+..||+++.+ +..+..
T Consensus 149 ~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~~--~~el~~ 219 (226)
T 1te2_A 149 SKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLSS--LTELTA 219 (226)
T ss_dssp CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECSC--GGGCCH
T ss_pred CCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEECC--HHHHhH
Confidence 01123333444444443456799999999999999999999999 4 4444567889999854 555543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=4.9e-06 Score=87.43 Aligned_cols=148 Identities=16% Similarity=0.175 Sum_probs=95.2
Q ss_pred hhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCc--CCCCCCceecchh----hh-----hc-----------
Q 043305 531 PSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSE--ADATEPNIIEGKS----FR-----AL----------- 588 (892)
Q Consensus 531 ~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~--~~~~~~~vi~G~~----~~-----~l----------- 588 (892)
+...+++++++ +|++++++||.....+..+.+++|+..++ ...+++.+..... +. ..
T Consensus 22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (244)
T 1s2o_A 22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG 100 (244)
T ss_dssp HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCCcChHHHHHHhccccHHHHHHHHHh
Confidence 46677888865 68999999999999999999998874321 1112222221100 00 00
Q ss_pred ---------------------CH-------HHHHHHhcccccceEEEe------ccCH--hhHHHHHHHHHHc-C---Ce
Q 043305 589 ---------------------SE-------TQREEIAGEDFGMICVMG------RSSP--SDKLLLVQALRKR-G---DV 628 (892)
Q Consensus 589 ---------------------~~-------~e~~~i~~~~~~~~~V~a------R~sP--~dK~~lV~~Lq~~-g---~v 628 (892)
.+ +++.+.+......+.+.. ...| .+|...++.+.+. | +.
T Consensus 101 ~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~ 180 (244)
T 1s2o_A 101 FEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQ 180 (244)
T ss_dssp CTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGG
T ss_pred ccCccccCcccCCCeEEEEEeChhhHHHHHHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHhCCCHHH
Confidence 00 112222211000122210 1112 2688888887764 2 56
Q ss_pred EEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhc-------ccEEEcCCCchHHHHHHH
Q 043305 629 VAVTGDGTNDAPALHEADIGLAMGIQGTEVAKES-------SDIIILDDNFASVVKVVR 680 (892)
Q Consensus 629 Va~tGDG~NDapALk~AdVGIAmgi~gt~vAkea-------aDiil~ddnf~sIv~~i~ 680 (892)
|+++||+.||.+|++.|++|++|| ++.+..|+. ||++..+.+-.++.++++
T Consensus 181 ~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 181 TLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp EEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred EEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 899999999999999999999999 888888885 889988777778888775
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.14 E-value=2.8e-06 Score=87.02 Aligned_cols=129 Identities=16% Similarity=0.225 Sum_probs=87.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCc------eecchhhhhcCHHHHHHHhcccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPN------IIEGKSFRALSETQREEIAGEDF 601 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~------vi~G~~~~~l~~~e~~~i~~~~~ 601 (892)
+++||+.++++.|+++|+++.++|+.....+..+.+.+|+..... ....+ .+.|.+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~-f~~~~~~~~~~~~~~~~~---------------- 148 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNV-FANRLKFYFNGEYAGFDE---------------- 148 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGE-EEECEEECTTSCEEEECT----------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccE-EeeeEEEcCCCcEecCCC----------------
Confidence 689999999999999999999999999999999999999863100 00000 0001000
Q ss_pred cceEEEeccCHhhHHHHHHHHHHc-C-CeEEEeCCCCCChHhhhcCCeeEeecCCC-cHhhhhcccEEEcCCCchHHHHH
Q 043305 602 GMICVMGRSSPSDKLLLVQALRKR-G-DVVAVTGDGTNDAPALHEADIGLAMGIQG-TEVAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 602 ~~~~V~aR~sP~dK~~lV~~Lq~~-g-~vVa~tGDG~NDapALk~AdVGIAmgi~g-t~vAkeaaDiil~ddnf~sIv~~ 678 (892)
....+.+..|-.+++.+.++ | +.+.++||+.||.+|.+.|+++|++|... .+.....+|+++.+ +..+...
T Consensus 149 ----~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~~ 222 (225)
T 1nnl_A 149 ----TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVELLGE 222 (225)
T ss_dssp ----TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGGCC-
T ss_pred ----CCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecC--HHHHHHH
Confidence 00011223566666655443 4 67999999999999999999988887332 23345578998854 7766554
Q ss_pred H
Q 043305 679 V 679 (892)
Q Consensus 679 i 679 (892)
+
T Consensus 223 l 223 (225)
T 1nnl_A 223 L 223 (225)
T ss_dssp -
T ss_pred H
Confidence 4
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.09 E-value=3.7e-06 Score=85.66 Aligned_cols=127 Identities=17% Similarity=0.120 Sum_probs=89.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.+++.+.++.+++.|+++.++|+.....+..+.+..|+...-. .++.+.... .
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~--------------------~ 145 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI-----NIVTRDDVS--------------------Y 145 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSS-----CEECGGGSS--------------------C
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhh-----eeeccccCC--------------------C
Confidence 457899999999999999999999999999999999999864211 223222110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe---eEeecCCCcHhhhhc-ccEEEcCCCchHHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI---GLAMGIQGTEVAKES-SDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV---GIAmgi~gt~vAkea-aDiil~ddnf~sIv~~i~~ 681 (892)
....|+--..+.+.+.-..+.+.++||+.||..|.+.|++ ++++|.+..+..++. +|+++.+ +..+...++.
T Consensus 146 ~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~--~~el~~~l~~ 221 (233)
T 3s6j_A 146 GKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYED--PLDLLNHLDE 221 (233)
T ss_dssp CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESS--HHHHHHTGGG
T ss_pred CCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECC--HHHHHHHHHH
Confidence 1112222222333332234679999999999999999999 888875555555554 9999864 8888887754
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.08 E-value=1.7e-05 Score=83.70 Aligned_cols=198 Identities=18% Similarity=0.127 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHhccCeEEEEEEeccccC-CCCchhhhh---hccCCCCCcEEE---EEEEecC-CCchhHHHHHHHHHhC
Q 043305 472 LTFKKAIEDMASSSLRCVAIAYRTYERE-RIPDEEELS---RWALPEDDLVLL---AIVGIKD-PCRPSVKDAIRLCRIA 543 (892)
Q Consensus 472 ~~~~~~i~~~a~~glR~l~~Ayk~~~~~-~~~~~~~~~---~~~~~e~~l~~l---Glvgi~D-plR~~v~~aI~~l~~A 543 (892)
+...+.++++.++|.++....-|. ..- ..- ..... ....+..|..++ |-+..+. ..++++.+.++.+++.
T Consensus 23 ~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~-~~l~~~~~~~~~i~~nGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~ 100 (261)
T 2rbk_A 23 SSTIEALEAAHAKGLKIFIATGRP-KAIINNL-SELQDRNLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKK 100 (261)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSC-GGGCCSC-HHHHHTTCCCEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCh-HHHHHHH-HHhCcccccCeEEEeCCEEEEECCEEEEecCCCHHHHHHHHHHHHHc
Confidence 456677888888999876555454 321 111 11000 000011111111 1112223 3468889999999999
Q ss_pred CCEEEEEecCCH------HHHH-HHHHHcCC-CCCcC-------CCCCCceecchhhhhcCHHHHHHHhcccccceEEEe
Q 043305 544 GVKVRMVTGDNI------QTAR-AIALECGI-LTSEA-------DATEPNIIEGKSFRALSETQREEIAGEDFGMICVMG 608 (892)
Q Consensus 544 GI~v~mvTGDn~------~TA~-aIA~~~GI-~~~~~-------~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~a 608 (892)
|+.+.+.|+|.. .... ..-..+++ ..... .....+++.+ ++++..++.+ .+..+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~-~~~~~~~~- 172 (261)
T 2rbk_A 101 GVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFI------TEEEEKEVLP-SIPTCEIG- 172 (261)
T ss_dssp TCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECC------CHHHHHHHGG-GSTTCEEE-
T ss_pred CCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEe------CHHHHHHHHH-hcCCeEEE-
Confidence 999888887764 1111 11112222 00000 0000011111 1222222222 11122322
Q ss_pred cc---------CHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHH
Q 043305 609 RS---------SPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASV 675 (892)
Q Consensus 609 R~---------sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sI 675 (892)
++ ....|...++.+.++ .+.+.++||+.||.+|++.|++|++|| ++.+..|+.||+++.+.+-.++
T Consensus 173 ~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv 251 (261)
T 2rbk_A 173 RWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGI 251 (261)
T ss_dssp CSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHH
T ss_pred EecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhH
Confidence 11 123677777777653 357899999999999999999999999 8888889999999876555568
Q ss_pred HHHHH
Q 043305 676 VKVVR 680 (892)
Q Consensus 676 v~~i~ 680 (892)
.++++
T Consensus 252 ~~~l~ 256 (261)
T 2rbk_A 252 SKAMK 256 (261)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87774
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.02 E-value=5.4e-06 Score=85.52 Aligned_cols=125 Identities=14% Similarity=0.109 Sum_probs=86.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. .++.+.....
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~~-------------------- 164 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK-----YIAGSNLDGT-------------------- 164 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS-----EEEEECTTSC--------------------
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE-----EEEeccccCC--------------------
Confidence 468999999999999999999999999999999999999863211 1222111100
Q ss_pred eccCHhhHHHHHHHHHHc-CCeEEEeCCCCCChHhhhcCCe---eEeecCCCcHh-hhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKR-GDVVAVTGDGTNDAPALHEADI---GLAMGIQGTEV-AKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~-g~vVa~tGDG~NDapALk~AdV---GIAmgi~gt~v-AkeaaDiil~ddnf~sIv~~i 679 (892)
....|+--..+.+.+.-. .+.+.++||+.||..|.+.|++ ++++|....+. .+..+|+++.+ +..+.++|
T Consensus 165 ~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l 239 (240)
T 3sd7_A 165 RVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVEN--VESIKDIL 239 (240)
T ss_dssp CCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESS--STTHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECC--HHHHHHHh
Confidence 011122222333333334 5679999999999999999999 88888333333 35789999865 77777654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.02 E-value=3.4e-06 Score=85.22 Aligned_cols=123 Identities=16% Similarity=0.153 Sum_probs=80.2
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEe
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMG 608 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~a 608 (892)
+.+++.+.++.+++.|+++.++|+........+.+..|+...- ..++.+.... ..
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--------------------~~ 144 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF-----DIIIGGEDVT--------------------HH 144 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC-----SEEECGGGCS--------------------SC
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe-----eeeeehhhcC--------------------CC
Confidence 3689999999999999999999999999999888888875321 1222221110 00
Q ss_pred ccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee----cCCCcHhhhhc-ccEEEcCCCchHHHHHH
Q 043305 609 RSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM----GIQGTEVAKES-SDIIILDDNFASVVKVV 679 (892)
Q Consensus 609 R~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm----gi~gt~vAkea-aDiil~ddnf~sIv~~i 679 (892)
...|.--..+.+.+.-..+.+.++||+.||.+|++.|+++++| + +..+..++. ||+++.+ +..+...+
T Consensus 145 k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~~--~~el~~~l 217 (225)
T 3d6j_A 145 KPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIST--LGQLISVP 217 (225)
T ss_dssp TTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEESS--GGGGC---
T ss_pred CCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEECC--HHHHHHhh
Confidence 1112222233333332345688999999999999999999887 3 333334444 8999854 66666665
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.01 E-value=1e-05 Score=84.86 Aligned_cols=127 Identities=18% Similarity=0.188 Sum_probs=87.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.+++.+.++.+++.|+++.++|++....+..+.+.+|+..... ..++.+.... .
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~--------------------~ 158 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP----DFLVTPDDVP--------------------A 158 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC----SCCBCGGGSS--------------------C
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh----HheecCCccC--------------------C
Confidence 467899999999999999999999999988888888887643210 1222221110 0
Q ss_pred eccCHhhHHHHHHHHHHcC-CeEEEeCCCCCChHhhhcCC---eeEeecCCC-----------------------cHhhh
Q 043305 608 GRSSPSDKLLLVQALRKRG-DVVAVTGDGTNDAPALHEAD---IGLAMGIQG-----------------------TEVAK 660 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g-~vVa~tGDG~NDapALk~Ad---VGIAmgi~g-----------------------t~vAk 660 (892)
....|+--..+.+.+.-.. +.+.++||+.||..|++.|+ +++++|... .+..+
T Consensus 159 ~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T 1swv_A 159 GRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFV 238 (267)
T ss_dssp CTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHH
Confidence 1123444444555554444 67999999999999999999 788888331 23334
Q ss_pred hc-ccEEEcCCCchHHHHHHH
Q 043305 661 ES-SDIIILDDNFASVVKVVR 680 (892)
Q Consensus 661 ea-aDiil~ddnf~sIv~~i~ 680 (892)
+. ||+++. ++..+..++.
T Consensus 239 ~~~ad~v~~--~~~el~~~l~ 257 (267)
T 1swv_A 239 ENGAHFTIE--TMQELESVME 257 (267)
T ss_dssp HTTCSEEES--SGGGHHHHHH
T ss_pred hcCCceecc--CHHHHHHHHH
Confidence 44 999985 4888877764
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.00 E-value=3.9e-05 Score=78.21 Aligned_cols=124 Identities=19% Similarity=0.207 Sum_probs=89.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.+++. +++.++|+.....+..+.+..|+...-. .++.+.... .
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~-----~~~~~~~~~--------------------~ 153 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFD-----SITTSEEAG--------------------F 153 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCS-----EEEEHHHHT--------------------B
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcc-----eeEeccccC--------------------C
Confidence 4679999999999999 9999999999999999999999863211 222221110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCC-CChHhhhcCC---eeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGT-NDAPALHEAD---IGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~-NDapALk~Ad---VGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
....|+--..+.+.+.-..+.+.++||+. ||..|.+.|+ +++++| ++.+..++.+|+++.+ +..+...++
T Consensus 154 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~~--~~el~~~l~ 227 (234)
T 3u26_A 154 FKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVSD--LREVIKIVD 227 (234)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEESS--THHHHHHHH
T ss_pred CCcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeCC--HHHHHHHHH
Confidence 11223333344444443457899999997 9999999999 788888 6666677799999965 888887764
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.00 E-value=5.4e-06 Score=88.88 Aligned_cols=67 Identities=18% Similarity=0.262 Sum_probs=55.9
Q ss_pred hhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 613 SDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 613 ~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
..|...++.+.++ | +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+.+-.++.++++
T Consensus 210 ~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 210 TGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLITDSEYSKGITNTLK 280 (289)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBCSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEcCCCCcCHHHHHHH
Confidence 3577777766554 3 56999999999999999999999999 788889999999998877777877775
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.98 E-value=4e-06 Score=94.35 Aligned_cols=114 Identities=21% Similarity=0.189 Sum_probs=75.8
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceE-
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMIC- 605 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~- 605 (892)
..++|++++.|+.||++|++|++|||.....++.+|+++|+..... ...++ |.++..-.+. ++.
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip---~~~Vi-g~~l~~~~dG-----------~~tg 284 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMK---EEKVL-GLRLMKDDEG-----------KILP 284 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCC---GGGEE-EECEEECTTC-----------CEEE
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCC---cceEE-EeEEEEecCC-----------ceee
Confidence 4578999999999999999999999999999999999998742110 00111 2221100000 000
Q ss_pred EEe----ccCHhhHHHHHHHHHHc---CCeEEEeCCCCCChHhhhc-CCeeEeecCCC
Q 043305 606 VMG----RSSPSDKLLLVQALRKR---GDVVAVTGDGTNDAPALHE-ADIGLAMGIQG 655 (892)
Q Consensus 606 V~a----R~sP~dK~~lV~~Lq~~---g~vVa~tGDG~NDapALk~-AdVGIAmgi~g 655 (892)
-+. -+..+.|...++.+.+. ...|.++|||.||.|||++ +|.++++.++.
T Consensus 285 ~~~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liinr 342 (385)
T 4gxt_A 285 KFDKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIHR 342 (385)
T ss_dssp EECTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEEECC
T ss_pred eecCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEEEcC
Confidence 010 13457899888876432 1346677999999999996 67777766553
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.97 E-value=5.8e-06 Score=83.48 Aligned_cols=113 Identities=10% Similarity=0.060 Sum_probs=77.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.+++.|+++.++|++ ..+..+.+.+|+...-. .++.+.... .
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~-----~~~~~~~~~--------------------~ 143 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFD-----AIADPAEVA--------------------A 143 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCS-----EECCTTTSS--------------------S
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcc-----eEeccccCC--------------------C
Confidence 46789999999999999999999998 45566777788753211 122221110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcC
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILD 669 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~d 669 (892)
....|+--..+.+.+.-..+.+.++||+.||.+|++.|+++++|+ ++.+..+ .||+++.+
T Consensus 144 ~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~ 203 (221)
T 2wf7_A 144 SKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPD 203 (221)
T ss_dssp CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESS
T ss_pred CCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcC
Confidence 011222333333443333467899999999999999999999998 6666667 89999865
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.96 E-value=6.9e-06 Score=85.60 Aligned_cols=123 Identities=23% Similarity=0.313 Sum_probs=85.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.....
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~~~~-------------------- 168 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF-----SEMLGGQSLPE-------------------- 168 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-----SEEECTTTSSS--------------------
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE-----EEEEecccCCC--------------------
Confidence 56799999999999999999999999999999999999986321 12333222110
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee---cCC-CcHhhhhcccEEEcCCCchHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM---GIQ-GTEVAKESSDIIILDDNFASVVK 677 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm---gi~-gt~vAkeaaDiil~ddnf~sIv~ 677 (892)
..-.|+--..+.+.+.-..+.+.++||+.||.+|.+.|+++..+ |.. +.+..+..+|+++.+ +..+..
T Consensus 169 ~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~--~~el~~ 240 (243)
T 2hsz_A 169 IKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILK 240 (243)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGG
T ss_pred CCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECC--HHHHHH
Confidence 01123333444455444456799999999999999999988432 311 234457789999854 666544
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.96 E-value=2.9e-05 Score=78.98 Aligned_cols=125 Identities=10% Similarity=0.064 Sum_probs=84.0
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCC---HHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceE
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDN---IQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMIC 605 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn---~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~ 605 (892)
+.|++.+.++.+++.|+++.++|+.. ......+.+..|+...-. .++.+.+...
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~~------------------ 156 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFID-----KTFFADEVLS------------------ 156 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCS-----EEEEHHHHTC------------------
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhh-----hheeccccCC------------------
Confidence 47999999999999999999999999 888888888888753211 2222211100
Q ss_pred EEeccCHhhHHHHHHHHHHcCCeEEEeCCCC-CChHhhhcCCeeEeecC--CCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 606 VMGRSSPSDKLLLVQALRKRGDVVAVTGDGT-NDAPALHEADIGLAMGI--QGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 606 V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~-NDapALk~AdVGIAmgi--~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
....|+--..+.+.+.-..+.+.++||+. ||..|++.|+++++|-. +..+..++.+|+++. ++..+...+.
T Consensus 157 --~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 230 (235)
T 2om6_A 157 --YKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIP--SIANLKDVIE 230 (235)
T ss_dssp --CTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEES--SGGGHHHHHH
T ss_pred --CCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHh--hHHHHHHHHH
Confidence 01123222223333322346799999999 99999999999999932 333334456888875 4777776663
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.2e-05 Score=81.74 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=88.5
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. .++.+.... .
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~--------------------~ 150 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD-----HLISVDEVR--------------------L 150 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS-----EEEEGGGTT--------------------C
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc-----eeEehhhcc--------------------c
Confidence 578999999999999999999999999999999999999863211 222222110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecC---CCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGI---QGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi---~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
....|+--..+.+.+.-..+.+.++||+.||..|.+.|+++++|-. +..+..+..+|+++.+ +..+...+
T Consensus 151 ~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 223 (230)
T 3um9_A 151 FKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSD--VGVLASRF 223 (230)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESS--HHHHHHTC
T ss_pred CCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCC--HHHHHHHH
Confidence 1112333333444443334679999999999999999999999932 3344456789999865 77776654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.95 E-value=5.2e-06 Score=82.37 Aligned_cols=119 Identities=16% Similarity=0.202 Sum_probs=81.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++|++.+.++.|++.|+++.++|+....... ..+..|+...-. .++.+.+.. .
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~-----~~~~~~~~~--------------------~ 138 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT-----EILTSQSGF--------------------V 138 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE-----EEECGGGCC--------------------C
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee-----eEEecCcCC--------------------C
Confidence 35799999999999999999999999988888 878888753110 111111100 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee-EeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG-LAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG-IAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
....|+--..+.+.+.-..+.+.++||+.||.+|++.|+++ ++|+ +|.+ .+|+++.+ +..+.+++
T Consensus 139 ~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~~----~a~~v~~~--~~el~~~l 204 (207)
T 2go7_A 139 RKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-ESTY----EGNHRIQA--LADISRIF 204 (207)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCSC----TTEEECSS--TTHHHHHT
T ss_pred CCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCCC----CCCEEeCC--HHHHHHHH
Confidence 01123333344454443456799999999999999999997 8887 5552 68988754 66666554
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.1e-05 Score=82.42 Aligned_cols=126 Identities=13% Similarity=0.128 Sum_probs=91.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. .++.+.... .
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~--------------------~ 153 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFD-----HVLSVDAVR--------------------L 153 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCS-----EEEEGGGTT--------------------C
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcC-----EEEEecccC--------------------C
Confidence 567899999999999999999999999999999999999864211 222222111 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee----cCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM----GIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm----gi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
..-.|+--..+.+.+.-..+.+.++||+.||..|.+.|+++.+| + +..+..+..+|+++.+ +..+..++..
T Consensus 154 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~~--~~el~~~l~~ 228 (233)
T 3umb_A 154 YKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGHD--MRDLLQFVQA 228 (233)
T ss_dssp CTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEESS--HHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEECC--HHHHHHHHHH
Confidence 11123333334444443446799999999999999999999999 4 4455557789999964 8888887754
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.93 E-value=6.9e-06 Score=82.06 Aligned_cols=122 Identities=11% Similarity=0.129 Sum_probs=86.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.+++.|+++.++|+.....+..+.+..|+...-. .++.+.+.. .
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~--------------------~ 143 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFD-----IVLSGEEFK--------------------E 143 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----EEEEGGGCS--------------------S
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhee-----eEeeccccc--------------------C
Confidence 468899999999999999999999999999999999999863211 222222110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCC-cHhhhhcccEEEcCCCchHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQG-TEVAKESSDIIILDDNFASVV 676 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~g-t~vAkeaaDiil~ddnf~sIv 676 (892)
....|+--..+.+.+.-..+.+.++||+.||..|.+.|+++..|...+ ....+..+|+++.+ +..+.
T Consensus 144 ~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~--~~el~ 211 (214)
T 3e58_A 144 SKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDS--LTDVL 211 (214)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESS--GGGGG
T ss_pred CCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHH--HHHHH
Confidence 112233334444444434567999999999999999999999887443 34445788999864 65554
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.2e-05 Score=82.12 Aligned_cols=113 Identities=13% Similarity=0.140 Sum_probs=73.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+...-. .++.+.+.. .
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~-----~i~~~~~~~--------------------~ 144 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFH-----AIVDPTTLA--------------------K 144 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCS-----EECCC-------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcC-----EEeeHhhCC--------------------C
Confidence 4689999999999999999999999744 777888888863211 222221110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcC
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILD 669 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~d 669 (892)
....|+--..+.+.+.-..+.+.++||+.||..|.+.|+++++|. +..+..+ .||+++.+
T Consensus 145 ~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s 204 (233)
T 3nas_A 145 GKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQ 204 (233)
T ss_dssp ----CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSS
T ss_pred CCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCC
Confidence 111222223444444444577999999999999999999999998 5555555 89999865
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.8e-05 Score=80.85 Aligned_cols=122 Identities=13% Similarity=0.112 Sum_probs=82.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. .++.+.+.. .
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~-----~i~~~~~~~--------------------~ 157 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD-----SIIGSGDTG--------------------T 157 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS-----EEEEETSSS--------------------C
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee-----eEEcccccC--------------------C
Confidence 468999999999999999999999999999999999999863211 122221100 0
Q ss_pred eccCHhhHHHHHHHHHHcCC-eEEEeCCCCCChHhhhcCCe-eEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGD-VVAVTGDGTNDAPALHEADI-GLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~-vVa~tGDG~NDapALk~AdV-GIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
....|+--..+.+.+.-..+ .+.++||+.||..|.+.|++ ++.|+ ++.+ ..+|.++.+ |..+..++.
T Consensus 158 ~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~~--~~el~~~l~ 226 (231)
T 3kzx_A 158 IKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFKN--FYDIRNFIC 226 (231)
T ss_dssp CTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEESS--HHHHHHHHH
T ss_pred CCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeCC--HHHHHHHHH
Confidence 11223333444444443445 79999999999999999997 77776 4443 356777754 888777664
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.90 E-value=1.5e-05 Score=81.32 Aligned_cols=122 Identities=18% Similarity=0.144 Sum_probs=81.0
Q ss_pred CCchhHHHHHHHHHhC-CCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIA-GVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~A-GI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
++.|++.+.++.|++. |+++.++|+.....+..+.+..|+...-. .++.+.+..
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~-------------------- 147 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP-----FGAFADDAL-------------------- 147 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS-----CEECTTTCS--------------------
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcC-----cceecCCCc--------------------
Confidence 3579999999999999 99999999999999999999998863211 122222110
Q ss_pred EeccCHhhHHHHHH-HHHHcC-----CeEEEeCCCCCChHhhhcCC---eeEeecCCCcHhhhh-cccEEEcCCCchHHH
Q 043305 607 MGRSSPSDKLLLVQ-ALRKRG-----DVVAVTGDGTNDAPALHEAD---IGLAMGIQGTEVAKE-SSDIIILDDNFASVV 676 (892)
Q Consensus 607 ~aR~sP~dK~~lV~-~Lq~~g-----~vVa~tGDG~NDapALk~Ad---VGIAmgi~gt~vAke-aaDiil~ddnf~sIv 676 (892)
. .|.-+..+.+ .+++.| +.+.++||+.||.+|.+.|+ |++++|....+..+. .+|+++.+ +..+.
T Consensus 148 -~--~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~--~~el~ 222 (234)
T 2hcf_A 148 -D--RNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKN--FAETD 222 (234)
T ss_dssp -S--GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESC--SCCHH
T ss_pred -C--ccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCC--HHhHH
Confidence 0 1111222222 223333 57999999999999999999 667666333333333 38998864 56666
Q ss_pred HHH
Q 043305 677 KVV 679 (892)
Q Consensus 677 ~~i 679 (892)
..+
T Consensus 223 ~~l 225 (234)
T 2hcf_A 223 EVL 225 (234)
T ss_dssp HHH
T ss_pred HHH
Confidence 555
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.88 E-value=1.6e-05 Score=83.37 Aligned_cols=127 Identities=14% Similarity=0.079 Sum_probs=87.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...++.+.... .
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~--------------------~ 166 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT----PASTVFATDVV--------------------R 166 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC----CSEEECGGGSS--------------------S
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC----CceEecHHhcC--------------------C
Confidence 46789999999999999999999999999999999988875320 01222222110 0
Q ss_pred eccCHhhHHHHHHHHHHcC-CeEEEeCCCCCChHhhhcCC---eeEeecCC-----------------------CcHhhh
Q 043305 608 GRSSPSDKLLLVQALRKRG-DVVAVTGDGTNDAPALHEAD---IGLAMGIQ-----------------------GTEVAK 660 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g-~vVa~tGDG~NDapALk~Ad---VGIAmgi~-----------------------gt~vAk 660 (892)
....|.--..+.+.+.-.. +.+.++||+.||..|.+.|+ |++++|.+ ..+..+
T Consensus 167 ~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (277)
T 3iru_A 167 GRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLF 246 (277)
T ss_dssp CTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHh
Confidence 0112333334444444445 78999999999999999999 67888732 123333
Q ss_pred -hcccEEEcCCCchHHHHHHH
Q 043305 661 -ESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 661 -eaaDiil~ddnf~sIv~~i~ 680 (892)
..+|+++.+ +..+..++.
T Consensus 247 ~~~ad~v~~~--~~el~~~l~ 265 (277)
T 3iru_A 247 NAGAHYVIDS--VADLETVIT 265 (277)
T ss_dssp HHTCSEEESS--GGGTHHHHH
T ss_pred hCCCCEEecC--HHHHHHHHH
Confidence 459999964 888888774
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=8.3e-06 Score=86.69 Aligned_cols=129 Identities=12% Similarity=0.044 Sum_probs=87.5
Q ss_pred CCchhHHHHHHHHHhCCC--EEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceE
Q 043305 528 PCRPSVKDAIRLCRIAGV--KVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMIC 605 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI--~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~ 605 (892)
++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+...-. .++.+.... ...
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd-----~v~~~~~~~----------------~~~ 200 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFD-----GLTYCDYSR----------------TDT 200 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCS-----EEECCCCSS----------------CSS
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccc-----eEEEeccCC----------------Ccc
Confidence 578999999999999999 999999999999999999999864211 222211100 000
Q ss_pred EEeccCHhhHHHHHHHHHHcC-CeEEEeCCCCCChHhhhcCCeeEeecCCCcHh-----hhhcccEEEcCCCchHHHHHH
Q 043305 606 VMGRSSPSDKLLLVQALRKRG-DVVAVTGDGTNDAPALHEADIGLAMGIQGTEV-----AKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 606 V~aR~sP~dK~~lV~~Lq~~g-~vVa~tGDG~NDapALk~AdVGIAmgi~gt~v-----AkeaaDiil~ddnf~sIv~~i 679 (892)
..+...|+-=..+.+.+.-.. +.+.++||+.||..|.+.|++|.+|+...... ....+|+++.+ +..+..++
T Consensus 201 ~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~s--l~el~~~l 278 (282)
T 3nuq_A 201 LVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISD--ILELPHVV 278 (282)
T ss_dssp CCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESS--GGGGGGTS
T ss_pred cCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCC--HHHHHHHh
Confidence 111222332233333333344 78999999999999999999999998544332 13478898864 77666554
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.84 E-value=4.2e-05 Score=77.39 Aligned_cols=116 Identities=9% Similarity=0.007 Sum_probs=80.2
Q ss_pred CCchhHHHHHHHHHhCC-CEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAG-VKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AG-I~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
++.|++.+.++.|++.| +++.++|+........+.+.+|+...-. .+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~--------------------------------~~ 152 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD--------------------------------HI 152 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS--------------------------------EE
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh--------------------------------ee
Confidence 46789999999999999 9999999999999899999988853211 12
Q ss_pred EeccCHhhHHHHHHHHHH----cCCeEEEeCCCC-CChHhhhcCCeeEeecC------CCcHhhhhc-ccEEEcCCCchH
Q 043305 607 MGRSSPSDKLLLVQALRK----RGDVVAVTGDGT-NDAPALHEADIGLAMGI------QGTEVAKES-SDIIILDDNFAS 674 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~----~g~vVa~tGDG~-NDapALk~AdVGIAmgi------~gt~vAkea-aDiil~ddnf~s 674 (892)
++...| |...++.+.+ ..+.+.++||+. ||..|.+.|+++.+|=. .+....+.. +|+++.+ +..
T Consensus 153 ~~~~kp--k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~--l~e 228 (234)
T 3ddh_A 153 EVMSDK--TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKR--LDD 228 (234)
T ss_dssp EEESCC--SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSS--GGG
T ss_pred eecCCC--CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceeccc--HHH
Confidence 222223 3333333332 346799999996 99999999999988721 222222344 4888764 777
Q ss_pred HHHHH
Q 043305 675 VVKVV 679 (892)
Q Consensus 675 Iv~~i 679 (892)
+..++
T Consensus 229 l~~~l 233 (234)
T 3ddh_A 229 LLSLL 233 (234)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 76543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.84 E-value=2.9e-05 Score=79.56 Aligned_cols=125 Identities=16% Similarity=0.147 Sum_probs=86.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.+.. .
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f-----~~i~~~~~~~--------------------~ 137 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF-----DLIVGGDTFG--------------------E 137 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-----SEEECTTSSC--------------------T
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh-----eEEEecCcCC--------------------C
Confidence 56899999999999999999999999999999999999975321 1222222110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee-EeecC-CCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG-LAMGI-QGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG-IAmgi-~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
....|+--..+.+.+.-..+.+.++||+.||.+|.+.|++. +++.. .+.... ..+|+++.+ +..+...+.
T Consensus 138 ~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~--~~el~~~l~ 209 (222)
T 2nyv_A 138 KKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSR--PSDLVKLMD 209 (222)
T ss_dssp TCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESS--TTHHHHHHH
T ss_pred CCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECC--HHHHHHHHH
Confidence 12234444555555544456799999999999999999987 55431 222222 668988854 888877664
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.82 E-value=2.2e-05 Score=81.38 Aligned_cols=139 Identities=12% Similarity=0.087 Sum_probs=89.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++|++.+.++.|+++|+++.++|+.....+..+.+ |+... . .++.+..... . ..+....+ ......+
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~-----~v~~~~~~~~-~-~~~~~~~~--kp~p~~~ 144 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-D-----RIYCNHASFD-N-DYIHIDWP--HSCKGTC 144 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-G-----GEEEEEEECS-S-SBCEEECT--TCCCTTC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-C-----eEEeeeeEEc-C-CceEEecC--CCCcccc
Confidence 678999999999999999999999999998888887 77432 1 2232221100 0 00000000 0000001
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhc--ccEEEcCCCchHHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKES--SDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkea--aDiil~ddnf~sIv~~i~~ 681 (892)
-+....+|..+++.+....+.+.++||+.||.+|.+.|++.++.+ ...+..++. +|+++. ++..+...+..
T Consensus 145 ~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~~l~~ 217 (236)
T 2fea_A 145 SNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRKEIEN 217 (236)
T ss_dssp CSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHHHHHT
T ss_pred ccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHHHHHH
Confidence 111245788888888766788999999999999999999998753 112223332 777764 58888887754
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=4.8e-05 Score=78.43 Aligned_cols=124 Identities=8% Similarity=0.084 Sum_probs=85.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. .++.+.+.. .
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~--------------------~ 159 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLD-----SCLSADDLK--------------------I 159 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----EEEEGGGTT--------------------C
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcC-----EEEEccccC--------------------C
Confidence 578999999999999999999999999999999999999863211 222222110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCC---eeEeecCCCcHhhhhcc-cEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEAD---IGLAMGIQGTEVAKESS-DIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~Ad---VGIAmgi~gt~vAkeaa-Diil~ddnf~sIv~~i 679 (892)
..-.|+--..+.+.+.-..+.+.++||+.||..|.+.|+ +++..| .+.+..+..+ |+++.+ +..+...+
T Consensus 160 ~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~~--~~el~~~l 232 (240)
T 2no4_A 160 YKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVNS--LSELWPLL 232 (240)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEESS--GGGHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeCC--HHHHHHHH
Confidence 112233333444444434467889999999999999999 555555 2233334557 998854 88877765
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.76 E-value=3.1e-05 Score=79.18 Aligned_cols=125 Identities=14% Similarity=0.132 Sum_probs=86.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. .++.+.+.. .
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~--------------------~ 149 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD-----HLLSVDPVQ--------------------V 149 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----EEEESGGGT--------------------C
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhh-----eEEEecccC--------------------C
Confidence 467999999999999999999999999999999999999853211 222222110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCC---cHhhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQG---TEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~g---t~vAkeaaDiil~ddnf~sIv~~i 679 (892)
....|+--..+.+.+.-..+.+.++||+.||..|.+.|+++.+|-..+ .+..+..+|+++.+ +..+...+
T Consensus 150 ~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 222 (232)
T 1zrn_A 150 YKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVELF 222 (232)
T ss_dssp CTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHTTC
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECC--HHHHHHHH
Confidence 122333334444444434467889999999999999999999883222 23345678998854 77766554
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.74 E-value=6.4e-05 Score=74.25 Aligned_cols=126 Identities=15% Similarity=0.062 Sum_probs=79.5
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCH---------------HHHHHHHHHcC--CCCCcCCCCCCceecchhhhhcCH
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNI---------------QTARAIALECG--ILTSEADATEPNIIEGKSFRALSE 590 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~---------------~TA~aIA~~~G--I~~~~~~~~~~~vi~G~~~~~l~~ 590 (892)
++.|++.++++.|+++|+++.++|+... ..+..+.+.+| +..--. .....+.+.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~----~~~~~~~~~----- 97 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFM----CPHGPDDGC----- 97 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEE----ECCCTTSCC-----
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE----cCCCCCCCC-----
Confidence 5789999999999999999999999875 45556666666 221000 000000000
Q ss_pred HHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCC---eeEeecCCCcHhhh----hcc
Q 043305 591 TQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEAD---IGLAMGIQGTEVAK----ESS 663 (892)
Q Consensus 591 ~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~Ad---VGIAmgi~gt~vAk----eaa 663 (892)
-...-.|+-=..+.+.+.-..+.+.++||+.||..+.++|+ |++++| .+..... ..+
T Consensus 98 ---------------~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~ 161 (179)
T 3l8h_A 98 ---------------ACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEG 161 (179)
T ss_dssp ---------------SSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTT
T ss_pred ---------------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCC
Confidence 00111222222333333334577999999999999999999 588887 4444433 457
Q ss_pred cEEEcCCCchHHHHHHH
Q 043305 664 DIIILDDNFASVVKVVR 680 (892)
Q Consensus 664 Diil~ddnf~sIv~~i~ 680 (892)
|+++.+ +..+...+.
T Consensus 162 d~v~~~--l~el~~~l~ 176 (179)
T 3l8h_A 162 TRVCED--LAAVAEQLL 176 (179)
T ss_dssp EEEESS--HHHHHHHHH
T ss_pred cEEecC--HHHHHHHHH
Confidence 999875 877777664
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00014 Score=74.91 Aligned_cols=124 Identities=14% Similarity=0.131 Sum_probs=82.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.+.. .
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~--------------------~ 148 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF-----EHVIISDFEG--------------------V 148 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC-----SEEEEGGGGT--------------------C
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc-----cEEEEeCCCC--------------------C
Confidence 46789999999999999999999999999999999999975321 1222222110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCC-CChHhhhcCCeeEee---cCCCcHhhh---hcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGT-NDAPALHEADIGLAM---GIQGTEVAK---ESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~-NDapALk~AdVGIAm---gi~gt~vAk---eaaDiil~ddnf~sIv~~i 679 (892)
....|+-=..+.+.+.-..+.+.++||+. ||..|.+.|+++... | .+..... ..+|.++.+ +..+...+
T Consensus 149 ~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~~--~~el~~~l 224 (241)
T 2hoq_A 149 KKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEIDN--LESLLEVL 224 (241)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEESS--TTHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEECC--HHHHHHHH
Confidence 11122222233333333346799999998 999999999987654 3 2333333 268998854 77776655
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.67 E-value=9.4e-06 Score=81.79 Aligned_cols=121 Identities=9% Similarity=0.110 Sum_probs=80.3
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-. .++.+.+.. .
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~--------------------~ 136 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA-----VTISADDTP--------------------K 136 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE-----EEECGGGSS--------------------C
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc-----EEEecCcCC--------------------C
Confidence 4689999999999999 9999999999998888888888752110 122211110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCC---CcHhhhhcccEEEcCCCchHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQ---GTEVAKESSDIIILDDNFASVVK 677 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~---gt~vAkeaaDiil~ddnf~sIv~ 677 (892)
..-.|+--..+.+.+.-..+.+.++||+.||.+|.+.|+++++|... ..+..++ +|+++.+ +..+..
T Consensus 137 ~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~--~~el~~ 206 (209)
T 2hdo_A 137 RKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQK--PLDILE 206 (209)
T ss_dssp CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESS--GGGGGG
T ss_pred CCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCC--HHHHHH
Confidence 01112222333343333346799999999999999999999997421 2344455 9998854 555543
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.67 E-value=6.9e-05 Score=77.00 Aligned_cols=127 Identities=13% Similarity=0.109 Sum_probs=80.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+....+. |+...-. ...++.+.+.. .
T Consensus 108 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~---~~~~~~~~~~~--------------------~ 163 (247)
T 3dv9_A 108 ERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQ---ANLMVTAFDVK--------------------Y 163 (247)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCC---GGGEECGGGCS--------------------S
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcC---CCeEEecccCC--------------------C
Confidence 5679999999999999999999999988877777777 7753210 01233332210 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee---EeecCCCcHh-hhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG---LAMGIQGTEV-AKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG---IAmgi~gt~v-AkeaaDiil~ddnf~sIv~~i~ 680 (892)
....|+--..+.+.+.-..+.+.++||+.||..|.+.|+++ +..|....+. .+..+|+++.+ +..+..++.
T Consensus 164 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~--~~el~~~l~ 238 (247)
T 3dv9_A 164 GKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHS--MPDFNKNWE 238 (247)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESS--HHHHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 12233333444444444456799999999999999999964 3333111122 23479999865 887777664
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00016 Score=74.03 Aligned_cols=136 Identities=16% Similarity=0.118 Sum_probs=82.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCC---------------HHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHH
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDN---------------IQTARAIALECGILTSEADATEPNIIEGKSFRALSETQ 592 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn---------------~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e 592 (892)
++.|++.++++.|+++|+++.++|+.. ...+..+.++.|+.-. ..+..+........+
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~------~~~~~~~~~~~~~~~- 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD------GIYYCPHHPQGSVEE- 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS------EEEEECCBTTCSSGG-
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceE------EEEECCcCCCCcccc-
Confidence 678999999999999999999999999 4677778888887410 011111000000000
Q ss_pred HHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCC----eeEeecCCCcHhhhhcccEEEc
Q 043305 593 REEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEAD----IGLAMGIQGTEVAKESSDIIIL 668 (892)
Q Consensus 593 ~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~Ad----VGIAmgi~gt~vAkeaaDiil~ 668 (892)
.. .......-.|+--..+.+.+.-..+.+.|+||+.||..+.++|+ |++..|....+.....+|+++.
T Consensus 123 ----~~----~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~ 194 (211)
T 2gmw_A 123 ----FR----QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN 194 (211)
T ss_dssp ----GB----SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES
T ss_pred ----cC----ccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC
Confidence 00 00001122333333344444333467899999999999999999 4555453223333456899885
Q ss_pred CCCchHHHHHHH
Q 043305 669 DDNFASVVKVVR 680 (892)
Q Consensus 669 ddnf~sIv~~i~ 680 (892)
++..+.+++.
T Consensus 195 --~l~el~~~l~ 204 (211)
T 2gmw_A 195 --SLADLPQAIK 204 (211)
T ss_dssp --CGGGHHHHHH
T ss_pred --CHHHHHHHHH
Confidence 4888877664
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00019 Score=73.04 Aligned_cols=123 Identities=11% Similarity=0.072 Sum_probs=84.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.++ .|+++.++|+.....+..+.+.+|+...-. .++.+.+.. .
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~--------------------~ 160 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFK-----KIILSEDLG--------------------V 160 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCS-----EEEEGGGTT--------------------C
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhce-----eEEEeccCC--------------------C
Confidence 46789999999999 999999999999999999999998863211 222222110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCC-CChHhhhcCCeeEeecCCCcH-hhhhcccEEEcCCCchHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGT-NDAPALHEADIGLAMGIQGTE-VAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~-NDapALk~AdVGIAmgi~gt~-vAkeaaDiil~ddnf~sIv~~ 678 (892)
....|+--..+.+.+.-..+.+.++||+. ||..|.+.|+++++|+..+.. ..+..+|+++.+ +..+.++
T Consensus 161 ~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~s--l~e~~~~ 231 (240)
T 3qnm_A 161 LKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHS--LKELMNL 231 (240)
T ss_dssp CTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESS--THHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECC--HHHHHHH
Confidence 11122222223333322346899999995 999999999999999855542 456789999865 6666554
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.61 E-value=7.4e-05 Score=77.35 Aligned_cols=123 Identities=17% Similarity=0.173 Sum_probs=81.2
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEe
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMG 608 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~a 608 (892)
+.|++.+.++.|++.|+++.++|+.....+..+-+.+|+. .-. .++.+.+.. ..
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~-----~~~~~~~~~--------------------~~ 164 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFD-----FALGEKSGI--------------------RR 164 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCS-----EEEEECTTS--------------------CC
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-cee-----EEEecCCCC--------------------CC
Confidence 5689999999999999999999999988888888888874 211 233222110 00
Q ss_pred ccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee---EeecCCCcHh-hhhcccEEEcCCCchHHHHHH
Q 043305 609 RSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG---LAMGIQGTEV-AKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 609 R~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG---IAmgi~gt~v-AkeaaDiil~ddnf~sIv~~i 679 (892)
...|+-=..+.+.+.-..+.+.++||+.||..|.+.|++. +++|....+. .+..+|.++.+ +..+...+
T Consensus 165 Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~--~~el~~~l 237 (240)
T 2hi0_A 165 KPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDT--AEKLEEAI 237 (240)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECS--HHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECC--HHHHHHHh
Confidence 1122221223333332346799999999999999999994 6666322233 33468988854 77766554
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.58 E-value=7.4e-05 Score=77.15 Aligned_cols=127 Identities=13% Similarity=0.116 Sum_probs=82.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+....+. |+...-. ...++.+.+.. .
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~---~d~i~~~~~~~--------------------~ 164 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFH---KELMVTAFDVK--------------------Y 164 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCC---GGGEECTTTCS--------------------S
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcC---cceEEeHHhCC--------------------C
Confidence 5679999999999999999999999887777776666 7753210 01233332211 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHh----hhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV----AKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~v----AkeaaDiil~ddnf~sIv~~i~ 680 (892)
....|+--..+.+.+.-..+.+.++||+.||..|.+.|+++..+-..|... .+..+|+++.+ +..+..++.
T Consensus 165 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s--~~el~~~l~ 239 (243)
T 3qxg_A 165 GKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPS--MQTLCDSWD 239 (243)
T ss_dssp CTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESC--HHHHHHHHH
T ss_pred CCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 112233333333333333467999999999999999999854432244332 23469999864 888877664
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.55 E-value=4.5e-05 Score=79.62 Aligned_cols=128 Identities=13% Similarity=0.080 Sum_probs=85.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.....+..+.+..|+...-. ..++.+.+.. ..
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~i~~~~~~~-------------------~~ 166 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAG----EHIYDPSWVG-------------------GR 166 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHC----SCEECGGGGT-------------------TC
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhcc----ceEEeHhhcC-------------------cC
Confidence 457899999999999999999999999999999999998752111 0022222110 00
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee-EeecCCC-------cHh-hhhcccEEEcCCCchHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG-LAMGIQG-------TEV-AKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG-IAmgi~g-------t~v-AkeaaDiil~ddnf~sIv~~ 678 (892)
....|+--..+.+.+.-..+.+.++||+.||..|.+.|+++ +.+. .| .+. .+..+|+++.+ +..+.+.
T Consensus 167 ~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~~--l~el~~~ 243 (259)
T 4eek_A 167 GKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLTS--HAELRAA 243 (259)
T ss_dssp CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEECS--HHHHHHH
T ss_pred CCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhCC--HHHHHHH
Confidence 11122222233333333346799999999999999999998 4343 23 223 34559999865 8888887
Q ss_pred HHH
Q 043305 679 VRW 681 (892)
Q Consensus 679 i~~ 681 (892)
+..
T Consensus 244 l~~ 246 (259)
T 4eek_A 244 LAE 246 (259)
T ss_dssp HHH
T ss_pred HHh
Confidence 753
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00048 Score=71.41 Aligned_cols=120 Identities=13% Similarity=0.106 Sum_probs=81.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+...-. .+...
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~------------------------------~i~~~ 160 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP------------------------------RIEVV 160 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC------------------------------CEEEE
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc------------------------------eeeee
Confidence 45799999999999 999999999999988888888888753210 11111
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCC-CChHhhhcCCeeEeecCCCcH--------hhhhcccE-EEcCCCchHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGT-NDAPALHEADIGLAMGIQGTE--------VAKESSDI-IILDDNFASVVK 677 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~-NDapALk~AdVGIAmgi~gt~--------vAkeaaDi-il~ddnf~sIv~ 677 (892)
..-.|+--..+.+.+.-..+.+.++||+. ||..|.+.|++++++=..|.. .....+|+ ++. ++..+..
T Consensus 161 ~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 238 (251)
T 2pke_A 161 SEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--DPSGWPA 238 (251)
T ss_dssp SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--SGGGHHH
T ss_pred CCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--CHHHHHH
Confidence 11223333334444433456799999999 999999999999876433321 11345787 664 4888877
Q ss_pred HHH
Q 043305 678 VVR 680 (892)
Q Consensus 678 ~i~ 680 (892)
++.
T Consensus 239 ~l~ 241 (251)
T 2pke_A 239 AVR 241 (251)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00031 Score=71.46 Aligned_cols=125 Identities=10% Similarity=0.051 Sum_probs=84.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-. .++.+.+.. .
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~--------------------~ 156 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK-----DIFVSEDTG--------------------F 156 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS-----EEEEGGGTT--------------------S
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh-----eEEEecccC--------------------C
Confidence 5688999999999999 9999999999999999999998863211 222221110 0
Q ss_pred eccCHhhHHHHHHHHH-HcCCeEEEeCCCC-CChHhhhcCCeeEeecCCC--cHhhhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALR-KRGDVVAVTGDGT-NDAPALHEADIGLAMGIQG--TEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq-~~g~vVa~tGDG~-NDapALk~AdVGIAmgi~g--t~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
....|+--..+.+.+. -..+.+.++||+. ||..|.+.|+++..+...| .+..+..+|+++.+ +..+.+++.
T Consensus 157 ~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~--~~el~~~l~ 231 (238)
T 3ed5_A 157 QKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRK--LEELYHILN 231 (238)
T ss_dssp CTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESS--GGGHHHHHT
T ss_pred CCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECC--HHHHHHHHH
Confidence 0112222222222222 1235799999998 9999999999954433243 45567789999865 888887764
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00012 Score=74.27 Aligned_cols=116 Identities=17% Similarity=0.147 Sum_probs=80.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++ |+++.++|+.....+..+-+.+|+...-. .+ +.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~-----~i--------------------------~~ 131 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD-----GI--------------------------YG 131 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----EE--------------------------EE
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----ee--------------------------ec
Confidence 467999999999999 99999999999888888888999863211 11 11
Q ss_pred eccCHhhHHHHHH-HHHHc---CCeEEEeCCCCCChHhhhcCCe---eEeecCCCcHhhh-hcccEEEcCCCchHHHH
Q 043305 608 GRSSPSDKLLLVQ-ALRKR---GDVVAVTGDGTNDAPALHEADI---GLAMGIQGTEVAK-ESSDIIILDDNFASVVK 677 (892)
Q Consensus 608 aR~sP~dK~~lV~-~Lq~~---g~vVa~tGDG~NDapALk~AdV---GIAmgi~gt~vAk-eaaDiil~ddnf~sIv~ 677 (892)
+...+.-|..+.+ .+++. .+.+.++||+.||..|.++|++ |+++|....+..+ ..+|+++.+ +..+..
T Consensus 132 ~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~--~~el~~ 207 (210)
T 2ah5_A 132 SSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLA 207 (210)
T ss_dssp ECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHH
T ss_pred CCCCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHH
Confidence 1111112333333 33333 3579999999999999999999 8888733233333 468998864 666554
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00021 Score=74.47 Aligned_cols=124 Identities=15% Similarity=0.167 Sum_probs=86.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+...-. .++.+.+.. .
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~-----~~~~~~~~~--------------------~ 145 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFD-----AVISVDAKR--------------------V 145 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCS-----EEEEGGGGT--------------------C
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhcc-----EEEEccccC--------------------C
Confidence 57899999999999 99999999999999999999999853211 222222110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCC-----------------------C---cHhhhh
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQ-----------------------G---TEVAKE 661 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~-----------------------g---t~vAke 661 (892)
....|+--..+.+.+.-..+.+.++||+.||..|.+.|+++.+|... + .+..+.
T Consensus 146 ~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~ 225 (253)
T 1qq5_A 146 FKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAE 225 (253)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSC
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCC
Confidence 11223333344444433346788999999999999999999988743 1 122345
Q ss_pred cccEEEcCCCchHHHHHHH
Q 043305 662 SSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 662 aaDiil~ddnf~sIv~~i~ 680 (892)
.+|+++.+ +..+...+.
T Consensus 226 ~~~~~~~~--~~el~~~l~ 242 (253)
T 1qq5_A 226 APDFVVPA--LGDLPRLVR 242 (253)
T ss_dssp CCSEEESS--GGGHHHHHH
T ss_pred CCCeeeCC--HHHHHHHHH
Confidence 78998854 888887763
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00018 Score=71.92 Aligned_cols=121 Identities=12% Similarity=0.131 Sum_probs=83.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+...- ..++.+.+.. .
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~--------------------~ 126 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF-----KGIFSAESVK--------------------E 126 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEEGGGGT--------------------C
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC-----cEEEehhhcC--------------------C
Confidence 46789999 9999999 999999999999999999999985321 1223322110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecC---CCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGI---QGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi---~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
..-.|+--..+.+.+. .+.+.++||+.||..|.+.|+++..+-. +..+..+..+|.++.+ +..+...+
T Consensus 127 ~Kp~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 197 (201)
T 2w43_A 127 YKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVND--FKELYEWI 197 (201)
T ss_dssp CTTCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESS--HHHHHHHH
T ss_pred CCCCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECC--HHHHHHHH
Confidence 1112433344455554 4678899999999999999999987721 2223334568998864 77776655
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00015 Score=72.51 Aligned_cols=92 Identities=11% Similarity=0.008 Sum_probs=64.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCC-HHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDN-IQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn-~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+...-. .+.+
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~------------------------------~~~~ 117 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV------------------------------HREI 117 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE------------------------------EEEE
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc------------------------------eeEE
Confidence 688999999999999999999999998 799999999999863210 1111
Q ss_pred EeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeE
Q 043305 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL 649 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGI 649 (892)
.....|+--..+.+.+.-..+.+.++||+.||..+.++|++..
T Consensus 118 ~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 118 YPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC 160 (187)
T ss_dssp SSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred EeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence 1111122112222222222357899999999999999998754
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00013 Score=77.30 Aligned_cols=115 Identities=16% Similarity=0.073 Sum_probs=78.9
Q ss_pred CchhHHHHHHHHHhC-CCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 529 CRPSVKDAIRLCRIA-GVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 529 lR~~v~~aI~~l~~A-GI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+.|++.+.++.+++. |+++.++|+.....+..+.+..|+..- ..++.+.+...
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f------~~i~~~~~~~~-------------------- 168 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRP------EYFITANDVKQ-------------------- 168 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCC------SSEECGGGCSS--------------------
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCcc------CEEEEcccCCC--------------------
Confidence 478999999999999 999999999999999999999887521 13333332110
Q ss_pred eccCHhhHHHHHHHHHH-------cCCeEEEeCCCCCChHhhhcCCeeEee---cCCCcHhhhhcccEEEcC
Q 043305 608 GRSSPSDKLLLVQALRK-------RGDVVAVTGDGTNDAPALHEADIGLAM---GIQGTEVAKESSDIIILD 669 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~-------~g~vVa~tGDG~NDapALk~AdVGIAm---gi~gt~vAkeaaDiil~d 669 (892)
....|+--..+.+.+.- ..+.+.++||+.||..|++.|+++++| |.+..+..+..||+++.+
T Consensus 169 ~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 169 GKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp CTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred CCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 01123333344444443 445699999999999999999966555 533333344468998854
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.40 E-value=4.6e-05 Score=79.06 Aligned_cols=118 Identities=12% Similarity=0.133 Sum_probs=76.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHH-cCCCCCcCCCCCCceecch--hhhhcCHHHHHHHhcccccce
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALE-CGILTSEADATEPNIIEGK--SFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~-~GI~~~~~~~~~~~vi~G~--~~~~l~~~e~~~i~~~~~~~~ 604 (892)
++.|++.+.++.|++.|+++.++|+.....+...-.+ .|+...- ..++.+. ..
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f-----~~~~~~~~~~~------------------- 167 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLF-----SHIVLGDDPEV------------------- 167 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTS-----SCEECTTCTTC-------------------
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhe-----eeEEecchhhc-------------------
Confidence 4688999999999999999999999987655443222 2332110 0122211 10
Q ss_pred EEEeccCHhhHHHHH-HHHHHcC-----CeEEEeCCCCCChHhhhcCC---eeEeecCCCcHhhhhcccEEEcCCCchHH
Q 043305 605 CVMGRSSPSDKLLLV-QALRKRG-----DVVAVTGDGTNDAPALHEAD---IGLAMGIQGTEVAKESSDIIILDDNFASV 675 (892)
Q Consensus 605 ~V~aR~sP~dK~~lV-~~Lq~~g-----~vVa~tGDG~NDapALk~Ad---VGIAmgi~gt~vAkeaaDiil~ddnf~sI 675 (892)
.+..| |..++ +.+++.| +.+.++||+.||..|.+.|+ +++++| ++.+..+..||+++.+ +..+
T Consensus 168 ---~~~Kp--~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~s--l~el 239 (250)
T 3l5k_A 168 ---QHGKP--DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLNS--LQDF 239 (250)
T ss_dssp ---CSCTT--STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECSC--GGGC
T ss_pred ---cCCCC--ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeecC--HHHh
Confidence 01111 11222 3333333 78999999999999999999 777778 5566688899999864 6555
Q ss_pred HH
Q 043305 676 VK 677 (892)
Q Consensus 676 v~ 677 (892)
..
T Consensus 240 ~~ 241 (250)
T 3l5k_A 240 QP 241 (250)
T ss_dssp CG
T ss_pred hH
Confidence 43
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00027 Score=71.64 Aligned_cols=122 Identities=15% Similarity=0.177 Sum_probs=80.5
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.+++.+.++.++. ++.++|+........+.+++|+...-. ..++.+... . .
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~----~~~~~~~~~------------~----~---- 139 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFA----PHIYSAKDL------------G----A---- 139 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTT----TCEEEHHHH------------C----T----
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhcc----ceEEecccc------------c----c----
Confidence 456788888888874 899999999999999999998863210 122222111 0 0
Q ss_pred e--ccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee-EeecCCCcH-------hhhhc-ccEEEcCCCchHHH
Q 043305 608 G--RSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG-LAMGIQGTE-------VAKES-SDIIILDDNFASVV 676 (892)
Q Consensus 608 a--R~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG-IAmgi~gt~-------vAkea-aDiil~ddnf~sIv 676 (892)
. ...|+--..+.+.+.-..+.+.++||+.||.+|++.|+++ ++|+ ++.+ ..++. +|+++.+ +..+.
T Consensus 140 ~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~~--~~el~ 216 (229)
T 2fdr_A 140 DRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLP 216 (229)
T ss_dssp TCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHH
T ss_pred CCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeecC--HHHHH
Confidence 0 1122333334444433346789999999999999999998 6666 5443 35666 9999854 77777
Q ss_pred HHH
Q 043305 677 KVV 679 (892)
Q Consensus 677 ~~i 679 (892)
..+
T Consensus 217 ~~l 219 (229)
T 2fdr_A 217 AVI 219 (229)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00038 Score=70.69 Aligned_cols=123 Identities=13% Similarity=0.161 Sum_probs=84.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++ |+++.++|+........+.+.++-. ...++.+.+.. .
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~-------fd~i~~~~~~~--------------------~ 150 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE-------FDHIITAQDVG--------------------S 150 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC-------CSEEEEHHHHT--------------------S
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc-------cCEEEEccccC--------------------C
Confidence 678999999999999 8999999999888777776653321 11223222111 1
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCCC-CChHhhhcCCeeEeecCCC----------cHhhhhcccEEEcCCCch
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDGT-NDAPALHEADIGLAMGIQG----------TEVAKESSDIIILDDNFA 673 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~-NDapALk~AdVGIAmgi~g----------t~vAkeaaDiil~ddnf~ 673 (892)
....|+-....++.+++. .+.+.++||+. ||..|.+.|+++.+|...+ .+..+..+|+++.+ +.
T Consensus 151 ~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~--~~ 228 (240)
T 3smv_A 151 YKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNS--MG 228 (240)
T ss_dssp CTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESS--HH
T ss_pred CCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCC--HH
Confidence 123444444554444443 46799999996 9999999999999995322 13345789999964 88
Q ss_pred HHHHHHH
Q 043305 674 SVVKVVR 680 (892)
Q Consensus 674 sIv~~i~ 680 (892)
.+.+++.
T Consensus 229 el~~~l~ 235 (240)
T 3smv_A 229 EMAEAHK 235 (240)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777664
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00027 Score=72.88 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=85.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.+++. +++.++|+.....+..+.+.+|+.- ..++.+... . .
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f-------~~~~~~~~~------------~--------~ 171 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW-------DMLLCADLF------------G--------H 171 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC-------SEECCHHHH------------T--------C
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc-------ceEEeeccc------------c--------c
Confidence 4578999999999985 9999999999999999999999851 122222111 0 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecC----CCc---Hh--hhhcccEEEcCCCchHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGI----QGT---EV--AKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi----~gt---~v--AkeaaDiil~ddnf~sIv~~ 678 (892)
....|+--..+.+.+.-..+.|.++||+.||..|.+.|+++++|.. .|. +. .+..+|+++.+ +..+..+
T Consensus 172 ~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~--l~el~~~ 249 (254)
T 3umc_A 172 YKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASD--LLDLHRQ 249 (254)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESS--HHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECC--HHHHHHH
Confidence 1122333333444443335679999999999999999999999984 232 11 26789999865 8887776
Q ss_pred HH
Q 043305 679 VR 680 (892)
Q Consensus 679 i~ 680 (892)
+.
T Consensus 250 l~ 251 (254)
T 3umc_A 250 LA 251 (254)
T ss_dssp HH
T ss_pred hc
Confidence 64
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00033 Score=71.96 Aligned_cols=123 Identities=19% Similarity=0.191 Sum_probs=84.5
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.-+ .++.+.....
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~-------~~~~~~~~~~-------------------- 167 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD-------VIIGSDINRK-------------------- 167 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS-------CCCCHHHHTC--------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee-------EEEEcCcCCC--------------------
Confidence 5678999999999997 99999999999999999999998511 1222211100
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCC----CcH----h-hhhcccEEEcCCCchHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQ----GTE----V-AKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~----gt~----v-AkeaaDiil~ddnf~sIv~~ 678 (892)
....|+-=..+.+.+.-..+.+.++||+.||..|.+.|+++++|... |.. . .+..+|+++.+ +..+..+
T Consensus 168 ~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~--~~el~~~ 245 (254)
T 3umg_A 168 YKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATD--ITDLAAQ 245 (254)
T ss_dssp CTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESS--HHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECC--HHHHHHH
Confidence 01112211122222222246799999999999999999999999842 211 1 36778999965 8888887
Q ss_pred HH
Q 043305 679 VR 680 (892)
Q Consensus 679 i~ 680 (892)
+.
T Consensus 246 l~ 247 (254)
T 3umg_A 246 LR 247 (254)
T ss_dssp HH
T ss_pred hc
Confidence 74
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00025 Score=69.87 Aligned_cols=106 Identities=16% Similarity=0.070 Sum_probs=68.2
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEe
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMG 608 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~a 608 (892)
+.|++.+.++.|++.|+++.++|+... .+..+.+..|+...-. .++.+.+.. ..
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~-----~~~~~~~~~--------------------~~ 136 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFT-----EVVTSSSGF--------------------KR 136 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEE-----EEECGGGCC--------------------CC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhee-----eeeeccccC--------------------CC
Confidence 578999999999999999999998864 5677778888753210 122211100 00
Q ss_pred ccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcc
Q 043305 609 RSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESS 663 (892)
Q Consensus 609 R~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaa 663 (892)
...|+--..+.+.+.-. .+.++||+.||.+|++.|++++++. +.....++..
T Consensus 137 kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l 188 (190)
T 2fi1_A 137 KPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVL 188 (190)
T ss_dssp TTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhcc
Confidence 11222222233332222 6899999999999999999998887 4444444443
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00029 Score=74.09 Aligned_cols=125 Identities=12% Similarity=0.151 Sum_probs=87.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+...-. .++.+.+.. .
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~-----~~~~~~~~~--------------------~ 159 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFD-----FVLTSEAAG--------------------W 159 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCS-----CEEEHHHHS--------------------S
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhh-----EEEeecccC--------------------C
Confidence 36799999999999999999999987664 578888889853211 222222110 1
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCC-CChHhhhcCCeeEeecCCCcHh-----hhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGT-NDAPALHEADIGLAMGIQGTEV-----AKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~-NDapALk~AdVGIAmgi~gt~v-----AkeaaDiil~ddnf~sIv~~i~ 680 (892)
..-.|+--..+.+.+.-..+.+.++||+. ||..|.+.|+++.+|...+... ....+|+++.+ +..+..++.
T Consensus 160 ~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~--l~el~~~l~ 236 (263)
T 3k1z_A 160 PKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPS--LAHLLPALD 236 (263)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESS--GGGHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCC--HHHHHHHHH
Confidence 12234444445555544457899999997 9999999999999998555322 12368999864 888888774
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0012 Score=66.05 Aligned_cols=136 Identities=13% Similarity=0.078 Sum_probs=89.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCH---HHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccce
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNI---QTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~---~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~ 604 (892)
++.||+.++++.|+++|+++.++|+-.. ..+..+.+.+|+...-. .++.+.+... .
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd-----~i~~~~~~~~----------------~ 92 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFD-----FIYASNSELQ----------------P 92 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEE-----EEEECCTTSS----------------T
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheE-----EEEEcccccc----------------c
Confidence 6899999999999999999999998765 88899999999863211 1111111000 0
Q ss_pred EEEeccCHhhHHHHHHHHHHcCCeEEEeCCC-CCChHhhhcCCeeEeecCCCcH-----hh-hhcccEEEcCCCchHHHH
Q 043305 605 CVMGRSSPSDKLLLVQALRKRGDVVAVTGDG-TNDAPALHEADIGLAMGIQGTE-----VA-KESSDIIILDDNFASVVK 677 (892)
Q Consensus 605 ~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG-~NDapALk~AdVGIAmgi~gt~-----vA-keaaDiil~ddnf~sIv~ 677 (892)
.-...-.|+--..+.+.+.-..+.+.++||+ .+|..+-++|++....-..+.. .. ...+|.++.+.++..+..
T Consensus 93 ~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~ 172 (189)
T 3ib6_A 93 GKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPE 172 (189)
T ss_dssp TCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHH
T ss_pred cCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHH
Confidence 0011223333334444444345779999999 7999999999987543212221 11 127899998667999998
Q ss_pred HHHHHHH
Q 043305 678 VVRWGRS 684 (892)
Q Consensus 678 ~i~~GR~ 684 (892)
++...+.
T Consensus 173 ~l~l~~~ 179 (189)
T 3ib6_A 173 ALLLLKK 179 (189)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8866543
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00079 Score=66.98 Aligned_cols=102 Identities=10% Similarity=0.050 Sum_probs=71.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.| ++.++|+........+.+.+|+...-. .++.+.+.. .
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~-----~~~~~~~~~--------------------~ 139 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLL-----AFFTSSALG--------------------V 139 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCS-----CEEEHHHHS--------------------C
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcc-----eEEeecccC--------------------C
Confidence 36799999999999999 999999999999999999999753211 222221110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCC
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQG 655 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~g 655 (892)
....|+--..+.+.+.-..+.+.++||+.||..|.+.|++...+-..+
T Consensus 140 ~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 140 MKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 122343333444444434467999999999999999999998775344
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00053 Score=68.74 Aligned_cols=102 Identities=8% Similarity=-0.021 Sum_probs=68.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHH------cCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALE------CGILTSEADATEPNIIEGKSFRALSETQREEIAGEDF 601 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~------~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~ 601 (892)
++.|++.+.++.|++ |+++.++|+.....+..+.+. .|+...- ..++.+.+..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f-----~~~~~~~~~~--------------- 147 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF-----DKVYASCQMG--------------- 147 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS-----SEEEEHHHHT---------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc-----CeEEeecccC---------------
Confidence 467999999999999 999999999988887777766 5654211 1122211100
Q ss_pred cceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCC
Q 043305 602 GMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQG 655 (892)
Q Consensus 602 ~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~g 655 (892)
...-.|+--..+.+.+.-..+.+.++||+.||..|.+.|+++..|...+
T Consensus 148 -----~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 148 -----KYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp -----CCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred -----CCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 0112233333344444333567999999999999999999999987444
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0035 Score=65.74 Aligned_cols=41 Identities=12% Similarity=0.109 Sum_probs=35.1
Q ss_pred CchhHHHHHHHHHhCCCEEEEEec---CCHHHHHHHHHHcCCCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTG---DNIQTARAIALECGILT 569 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTG---Dn~~TA~aIA~~~GI~~ 569 (892)
+-|+++++|++++++|++|+++|| ..........+++|+..
T Consensus 25 ~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 25 PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 457899999999999999999999 67777777778888853
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.003 Score=63.57 Aligned_cols=125 Identities=16% Similarity=0.240 Sum_probs=82.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+...-+ .++.+.+.. .
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd-----~~~~~~~~~--------------------~ 138 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFD-----VMVFGDQVK--------------------N 138 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS-----EEECGGGSS--------------------S
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcccc-----ccccccccC--------------------C
Confidence 357899999999999999999999999999999999999874311 222222211 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee----EeecCCCcHhhhhc-ccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG----LAMGIQGTEVAKES-SDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG----IAmgi~gt~vAkea-aDiil~ddnf~sIv~~i~ 680 (892)
..-.|+-=..+.+.+.-..+.+.|+||..+|..+=++|++. +.-|.+..+..+++ ++.+. + ...+++.++
T Consensus 139 ~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~-~--~~eli~~l~ 213 (216)
T 3kbb_A 139 GKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV-K--PEEILNVLK 213 (216)
T ss_dssp CTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE-C--GGGHHHHHH
T ss_pred CcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC-C--HHHHHHHHH
Confidence 11223333333444433456799999999999999999974 33343444444444 45544 3 455555553
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00085 Score=70.52 Aligned_cols=37 Identities=22% Similarity=0.202 Sum_probs=32.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGI 567 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI 567 (892)
.+-+++.++|++++++|+++.++||..... +.+.++.
T Consensus 21 ~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~---~~~~l~~ 57 (246)
T 3f9r_A 21 CQTDEMRALIKRARGAGFCVGTVGGSDFAK---QVEQLGR 57 (246)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHCT
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHhhh
Confidence 567899999999999999999999999884 5666664
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0007 Score=69.29 Aligned_cols=108 Identities=18% Similarity=0.088 Sum_probs=63.3
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCH---------------HHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHH
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNI---------------QTARAIALECGILTSEADATEPNIIEGKSFRALSET 591 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~---------------~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~ 591 (892)
.++.|++.++++.|+++|+++.++|+... ..+..+.+++|+.-... .....+.. ..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----~~~~~~~~-g~~~-- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMV----LACAYHEA-GVGP-- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEE----EEECCCTT-CCST--
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceeeE----EEeecCCC-Ccee--
Confidence 46789999999999999999999999887 67777888888741100 00000000 0000
Q ss_pred HHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeE
Q 043305 592 QREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL 649 (892)
Q Consensus 592 e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGI 649 (892)
+. .. . .....-.|.-=..+.+.+.-..+.+.|+||+.||..+.+.|++..
T Consensus 128 ~~---~~----~-~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 LA---IP----D-HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp TC---CS----S-CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred ec---cc----C-CccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 00 00 0 000011121112222323223457899999999999999999754
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0078 Score=63.05 Aligned_cols=41 Identities=15% Similarity=0.068 Sum_probs=35.1
Q ss_pred CchhHHHHHHHHHhCCCEEEEEec---CCHHHHHHHHHHcCCCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTG---DNIQTARAIALECGILT 569 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTG---Dn~~TA~aIA~~~GI~~ 569 (892)
+-++++++|++++++|++|+++|| ..........+++|+..
T Consensus 23 ~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 23 KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 447899999999999999999998 77777777888888854
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0044 Score=62.66 Aligned_cols=119 Identities=13% Similarity=0.210 Sum_probs=75.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.+++. +++.++|+.... -+.+|+...- ..++.+... . .
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f-----~~~~~~~~~------------~--------~ 153 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF-----AFALCAEDL------------G--------I 153 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC-----SEEEEHHHH------------T--------C
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe-----eeeEEcccc------------C--------C
Confidence 4678999999999998 999999987654 2334443211 011111110 0 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCC-CChHhhhcCCeeEeec---CCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGT-NDAPALHEADIGLAMG---IQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~-NDapALk~AdVGIAmg---i~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
....|+--..+.+.+.-..+.+.++||+. ||..|.+.|+++.++- ....+. +..+|+++.+ +..+.+++.
T Consensus 154 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~--l~el~~~l~ 227 (230)
T 3vay_A 154 GKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHN--LSQLPEVLA 227 (230)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESS--GGGHHHHHH
T ss_pred CCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECC--HHHHHHHHH
Confidence 12223333344444433456799999998 9999999999988872 122222 6688999865 888887763
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.001 Score=61.87 Aligned_cols=96 Identities=9% Similarity=0.020 Sum_probs=64.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.+.. .
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~--------------------~ 72 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV-----DKVLLSGELG--------------------V 72 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS-----SEEEEHHHHS--------------------C
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc-----cEEEEeccCC--------------------C
Confidence 57899999999999999999999999988888888888875321 1122211100 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
.+-.|+--..+.+.+.-..+.+.++||+.+|..+.++|++-
T Consensus 73 ~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 73 EKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp CTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCE
Confidence 11223322233333322335689999999999999999874
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0097 Score=62.48 Aligned_cols=124 Identities=15% Similarity=0.153 Sum_probs=83.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+...-. .++.+.+.. .
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~-----~i~~~~~~~--------------------~ 174 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFD-----AIVIGGEQK--------------------E 174 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCS-----EEEEGGGSS--------------------S
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhh-----eEEecCCCC--------------------C
Confidence 578999999999998 69999999999999999999999863211 222222110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCC-CCChHhhhcCCe--eEeecCCCcH--hhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDG-TNDAPALHEADI--GLAMGIQGTE--VAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG-~NDapALk~AdV--GIAmgi~gt~--vAkeaaDiil~ddnf~sIv~~i 679 (892)
..-.|+--..+.+.+.-..+.+.|+||. .||..+-++|++ .+.++..+.. .....+|+++.+ +..+...+
T Consensus 175 ~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~--~~el~~~l 249 (260)
T 2gfh_A 175 EKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALL 249 (260)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECC--HHHHHHHH
Confidence 1122333333444443345679999994 999999999999 5777522221 133468888864 77777655
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.42 E-value=0.00047 Score=68.79 Aligned_cols=105 Identities=16% Similarity=0.120 Sum_probs=63.3
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHH-cCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALE-CGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~-~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
++.|++.+.++.|++.|+++.++|+........+... .|+...- ..++.+.+. .
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f-----~~~~~~~~~------------~-------- 145 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAA-----DHIYLSQDL------------G-------- 145 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHC-----SEEEEHHHH------------T--------
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhhe-----eeEEEeccc------------C--------
Confidence 5689999999999999999999998654433222222 2221000 011111100 0
Q ss_pred EeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcH
Q 043305 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTE 657 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~ 657 (892)
...-.|+--..+.+.+.-..+.+.++||+.||..|.+.|++...+...+.+
T Consensus 146 ~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 196 (206)
T 2b0c_A 146 MRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTT 196 (206)
T ss_dssp CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTH
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCch
Confidence 011223333444444443456799999999999999999999887644433
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.001 Score=70.19 Aligned_cols=56 Identities=18% Similarity=0.317 Sum_probs=47.8
Q ss_pred hhHHHHHHHHHHc--CCeEEEeCC----CCCChHhhhcCC-eeEeecCCCcHhhhhcccEEEcCC
Q 043305 613 SDKLLLVQALRKR--GDVVAVTGD----GTNDAPALHEAD-IGLAMGIQGTEVAKESSDIIILDD 670 (892)
Q Consensus 613 ~dK~~lV~~Lq~~--g~vVa~tGD----G~NDapALk~Ad-VGIAmgi~gt~vAkeaaDiil~dd 670 (892)
-+|..-++.| .. .+.|+++|| |.||.+||+.|+ +|++|| ++.+..|+.||++..+.
T Consensus 196 vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 196 WDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPET 258 (262)
T ss_dssp CSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCC
Confidence 4688888888 21 467999999 999999999999 699998 99999999999987543
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0036 Score=63.80 Aligned_cols=103 Identities=10% Similarity=-0.015 Sum_probs=68.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHH------cCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALE------CGILTSEADATEPNIIEGKSFRALSETQREEIAGEDF 601 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~------~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~ 601 (892)
++.|++.++++.|++. +++.++|+.....+..+.+. .|+...- ..++.+.+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f-----d~i~~~~~~~--------------- 170 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF-----EKTYLSYEMK--------------- 170 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC-----SEEEEHHHHT---------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhC-----CEEEeecccC---------------
Confidence 4679999999999999 99999999999888877643 3442110 0111111100
Q ss_pred cceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCc
Q 043305 602 GMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGT 656 (892)
Q Consensus 602 ~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt 656 (892)
...-.|+--..+.+.+.-..+.+.++||+.||..|.++|+++..+...+.
T Consensus 171 -----~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 171 -----MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGE 220 (229)
T ss_dssp -----CCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred -----CCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence 11223343344445554445789999999999999999999998874443
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.081 Score=53.06 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=25.0
Q ss_pred HHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCC
Q 043305 474 FKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDP 528 (892)
Q Consensus 474 ~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~Dp 528 (892)
+.+.++++..+|..++.+|. |-.++|++++.|+
T Consensus 153 ~~~~~~~~~~~G~T~V~vai----------------------dg~l~g~iavaD~ 185 (185)
T 2kmv_A 153 VNDFMTEHERKGRTAVLVAV----------------------DDELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHTTCEEEEEEE----------------------TTEEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEE----------------------CCEEEEEEEEEcC
Confidence 34456677888988888884 2368999999995
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.01 E-value=0.0016 Score=67.89 Aligned_cols=52 Identities=15% Similarity=0.234 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHH--cCCeEEEeCC----CCCChHhhhcCCe-eEeecCCCcHhhhhcccEE
Q 043305 613 SDKLLLVQALRK--RGDVVAVTGD----GTNDAPALHEADI-GLAMGIQGTEVAKESSDII 666 (892)
Q Consensus 613 ~dK~~lV~~Lq~--~g~vVa~tGD----G~NDapALk~AdV-GIAmgi~gt~vAkeaaDii 666 (892)
.+|..-++.| . ..+.|+++|| |.||.+||+.|+. |++|| ++.+..|+.||+|
T Consensus 187 ~~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v 245 (246)
T 2amy_A 187 WDKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF 245 (246)
T ss_dssp CSGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred CchHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence 3677777777 2 2468999999 9999999999988 99999 9999999999876
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.81 E-value=0.029 Score=58.70 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=37.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEe---cCCHHHHHHHHHHcCCCC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVT---GDNIQTARAIALECGILT 569 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvT---GDn~~TA~aIA~~~GI~~ 569 (892)
++ |+++++|++++++|++|+++| |..........+++|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 56 899999999999999999999 888888888888999864
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=95.76 E-value=0.017 Score=64.64 Aligned_cols=134 Identities=18% Similarity=0.178 Sum_probs=83.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+...-. ...++.+.+...- .+..+ ...-.
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd---~~~Ivs~ddv~~~-----~~~~~----~~kp~ 282 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFE---ADFIATASDVLEA-----ENMYP----QARPL 282 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSC---GGGEECHHHHHHH-----HHHST----TSCCC
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcC---CCEEEeccccccc-----ccccc----cccCC
Confidence 689999999999999999999999999999999999999864210 0134444332110 00011 00000
Q ss_pred eccCHhhHHHHHHHHHHc-----------------CCeEEEeCCCCCChHhhhcCCeeE-eecCCCc-------Hhhhhc
Q 043305 608 GRSSPSDKLLLVQALRKR-----------------GDVVAVTGDGTNDAPALHEADIGL-AMGIQGT-------EVAKES 662 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~-----------------g~vVa~tGDG~NDapALk~AdVGI-Amgi~gt-------~vAkea 662 (892)
..-.|+- ....+++. .+.+.|+||+.+|..|-++|++.. .+. .|. +.....
T Consensus 283 ~KP~P~~---~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ 358 (384)
T 1qyi_A 283 GKPNPFS---YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHH 358 (384)
T ss_dssp CTTSTHH---HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTT
T ss_pred CCCCHHH---HHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcC
Confidence 1112222 22233322 367999999999999999999753 222 221 122346
Q ss_pred ccEEEcCCCchHHHHHH
Q 043305 663 SDIIILDDNFASVVKVV 679 (892)
Q Consensus 663 aDiil~ddnf~sIv~~i 679 (892)
+|+++.+ +..+...+
T Consensus 359 ad~vi~s--l~eL~~~l 373 (384)
T 1qyi_A 359 ADYVINH--LGELRGVL 373 (384)
T ss_dssp CSEEESS--GGGHHHHH
T ss_pred CCEEECC--HHHHHHHH
Confidence 8999865 88877665
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.017 Score=58.33 Aligned_cols=87 Identities=11% Similarity=0.041 Sum_probs=57.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.++++.|+++|+++.++||.....+..+.. ... ..++.+.+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~~-------d~v~~~~~~---------------------- 83 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PVN-------DWMIAAPRP---------------------- 83 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TTT-------TTCEECCCC----------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---ccC-------CEEEECCcC----------------------
Confidence 568999999999999999999999998877755443 110 122222111
Q ss_pred eccCHhhHHHHHHHHHHcC----CeEEEeCCCCCChHhhhcCCe
Q 043305 608 GRSSPSDKLLLVQALRKRG----DVVAVTGDGTNDAPALHEADI 647 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g----~vVa~tGDG~NDapALk~AdV 647 (892)
.+..|. ...+.+.+++.| +.+.|+||..+|..+=++|++
T Consensus 84 ~~~KP~-p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~ 126 (196)
T 2oda_A 84 TAGWPQ-PDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGL 126 (196)
T ss_dssp SSCTTS-THHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTC
T ss_pred CCCCCC-hHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCC
Confidence 011221 123334444432 568999999999999999996
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.67 E-value=0.086 Score=54.28 Aligned_cols=41 Identities=15% Similarity=0.088 Sum_probs=36.0
Q ss_pred CchhHHHHHHHHHhCCCEEEEEe---cCCHHHHHHHHHHcCCCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVT---GDNIQTARAIALECGILT 569 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvT---GDn~~TA~aIA~~~GI~~ 569 (892)
+-++..++++.+++.|+++..+| |..........+++|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 45788999999999999999999 999998888888888753
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.64 E-value=0.007 Score=64.06 Aligned_cols=85 Identities=14% Similarity=0.143 Sum_probs=64.3
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCH----HHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccc
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNI----QTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDF 601 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~----~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~ 601 (892)
+.|+.|++.+.++.|+++|+++.++||... ..+..-.++.||..... .
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~---~------------------------- 150 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND---K------------------------- 150 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST---T-------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc---c-------------------------
Confidence 357899999999999999999999999865 46677778889963211 0
Q ss_pred cceEEEeccCHhhHHHHHHHHHHc-CCeEEEeCCCCCChHh
Q 043305 602 GMICVMGRSSPSDKLLLVQALRKR-GDVVAVTGDGTNDAPA 641 (892)
Q Consensus 602 ~~~~V~aR~sP~dK~~lV~~Lq~~-g~vVa~tGDG~NDapA 641 (892)
.++-|....+|....+.|++. -.+|+++||-.+|.++
T Consensus 151 ---~Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 151 ---TLLLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ---TEEEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred ---eeEecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 122232335788888888874 4689999999999986
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=94.99 E-value=0.022 Score=58.20 Aligned_cols=115 Identities=10% Similarity=0.114 Sum_probs=72.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.| ++.++|+-....+..+.+.+|+...- . .....
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f--------------------------~----~~~~~ 144 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEV--------------------------E----GRVLI 144 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHT--------------------------T----TCEEE
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhc--------------------------C----eeEEe
Confidence 67899999999999999 99999999998899999988875210 0 00111
Q ss_pred eccCHhhHHHHHHHHHH--cCCeEEEeCCCCC---ChHhhhcCCee---EeecCC--CcHhhhh--cccEEEcCCCchHH
Q 043305 608 GRSSPSDKLLLVQALRK--RGDVVAVTGDGTN---DAPALHEADIG---LAMGIQ--GTEVAKE--SSDIIILDDNFASV 675 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~--~g~vVa~tGDG~N---DapALk~AdVG---IAmgi~--gt~vAke--aaDiil~ddnf~sI 675 (892)
.. .|..+.+.+.+ ..+.+.++||+.| |..+-+.|++- +.-|.. ..+..++ .+|+++.+ +..+
T Consensus 145 ~~----~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~--~~el 218 (231)
T 2p11_A 145 YI----HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVER--IGDL 218 (231)
T ss_dssp ES----SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESS--GGGG
T ss_pred cC----ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecC--HHHH
Confidence 11 12223333332 3568999999999 55566777753 333311 1122333 38998854 6666
Q ss_pred HHHH
Q 043305 676 VKVV 679 (892)
Q Consensus 676 v~~i 679 (892)
...+
T Consensus 219 ~~~l 222 (231)
T 2p11_A 219 VEMD 222 (231)
T ss_dssp GGCG
T ss_pred HHHH
Confidence 5544
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.98 E-value=0.016 Score=61.49 Aligned_cols=85 Identities=18% Similarity=0.130 Sum_probs=63.0
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCH----HHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccc
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNI----QTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDF 601 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~----~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~ 601 (892)
++|+.|++.+.++.++++|+++.++||... ..+..-.++.||..-..
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----------------------------- 149 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE----------------------------- 149 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG-----------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc-----------------------------
Confidence 467899999999999999999999999854 46666677889963110
Q ss_pred cceEEEeccCHhhHHHHHHHHHHcC-CeEEEeCCCCCChHh
Q 043305 602 GMICVMGRSSPSDKLLLVQALRKRG-DVVAVTGDGTNDAPA 641 (892)
Q Consensus 602 ~~~~V~aR~sP~dK~~lV~~Lq~~g-~vVa~tGDG~NDapA 641 (892)
. .++-|..-.+|....+.|.+.| .+|+++||-.+|.++
T Consensus 150 -~-~Lilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 150 -S-AFYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp -G-GEEEESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred -c-ceeccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 0 1222322346777777787774 589999999999975
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.98 E-value=0.034 Score=56.24 Aligned_cols=95 Identities=12% Similarity=0.064 Sum_probs=60.5
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|+++|+++.++|+... .+..+.+.+|+...-. .++.+.+.. .
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~-----~~~~~~~~~--------------------~ 148 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFD-----ALALSYEIK--------------------A 148 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCS-----EEC---------------------------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHee-----EEEeccccC--------------------C
Confidence 4679999999999999999999998866 4778888889863211 122211100 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCC-ChHhhhcCCeeEee
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTN-DAPALHEADIGLAM 651 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~N-DapALk~AdVGIAm 651 (892)
..-.|+- +-+.+++.|-.-.++||+.+ |..+-++|++....
T Consensus 149 ~Kp~~~~---~~~~~~~~~~~~~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 149 VKPNPKI---FGFALAKVGYPAVHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp ----CCH---HHHHHHHHCSSEEEEESSCCCCCCCSSSCSEEEEE
T ss_pred CCCCHHH---HHHHHHHcCCCeEEEcCCchHhHHHHHHCCCeEEE
Confidence 1111222 22333333322289999999 99999999987553
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=94.89 E-value=0.067 Score=55.79 Aligned_cols=43 Identities=12% Similarity=0.037 Sum_probs=37.6
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEe---cCCHHHHHHHHHHcCCCC
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVT---GDNIQTARAIALECGILT 569 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvT---GDn~~TA~aIA~~~GI~~ 569 (892)
+++-+++.+++++++++|++++++| |..........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 4566889999999999999999999 888888888888888853
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=94.88 E-value=0.035 Score=57.54 Aligned_cols=116 Identities=12% Similarity=0.189 Sum_probs=75.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.+.|+.. .+..+-+.+|+...-. .++.+.+.. .
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd-----~i~~~~~~~--------------------~ 168 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFD-----FIADAGKCK--------------------N 168 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCS-----EECCGGGCC--------------------S
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccc-----eeecccccC--------------------C
Confidence 578999999999999999998877543 4566778889864321 333333221 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe-eEeecCCCcHhhhhcccEEEcCCCchHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI-GLAMGIQGTEVAKESSDIIILDDNFASV 675 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV-GIAmgi~gt~vAkeaaDiil~ddnf~sI 675 (892)
..-.|+-=..+.+.+.-..+.+.|+||..+|..|-++|++ .|+++ ..+. ...||+++.+ +..+
T Consensus 169 ~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~--~~~~-~~~ad~vi~~--l~eL 232 (250)
T 4gib_A 169 NKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVG--NYEN-LKKANLVVDS--TNQL 232 (250)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES--CTTT-TTTSSEEESS--GGGC
T ss_pred CCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEEC--ChhH-hccCCEEECC--hHhC
Confidence 1223433344444444445679999999999999999997 44443 2222 2458999854 6665
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.66 E-value=0.038 Score=55.93 Aligned_cols=44 Identities=16% Similarity=0.178 Sum_probs=32.5
Q ss_pred CCeEEEeCCC-CCChHhhhcCCeeE---eecCCCcHhhh---hcccEEEcC
Q 043305 626 GDVVAVTGDG-TNDAPALHEADIGL---AMGIQGTEVAK---ESSDIIILD 669 (892)
Q Consensus 626 g~vVa~tGDG-~NDapALk~AdVGI---Amgi~gt~vAk---eaaDiil~d 669 (892)
.+.+.++||+ .||..|++.|++++ ++|....+..+ ..+|+++.+
T Consensus 193 ~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~ 243 (250)
T 2c4n_A 193 SEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp GGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred cceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence 4679999999 79999999999884 45533324443 468998854
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.21 E-value=0.042 Score=58.71 Aligned_cols=95 Identities=15% Similarity=0.089 Sum_probs=65.8
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHH---HHHHHH--------cCCCCCcCCCCCCceecchhhhhcCHHHHH
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTA---RAIALE--------CGILTSEADATEPNIIEGKSFRALSETQRE 594 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA---~aIA~~--------~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~ 594 (892)
++++.|++.++++.|+++|+++.++||-....+ ..+-+. .|+. . ..++.+.+..
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~-~------~~~~~~~~~~-------- 250 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP-L------VMQCQREQGD-------- 250 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC-C------SEEEECCTTC--------
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC-c------hheeeccCCC--------
Confidence 578899999999999999999999999875432 333334 6772 1 1222211100
Q ss_pred HHhcccccceEEEeccCHhhHHHHHHHHHHcC-CeEEEeCCCCCChHhhhcCCee
Q 043305 595 EIAGEDFGMICVMGRSSPSDKLLLVQALRKRG-DVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 595 ~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g-~vVa~tGDG~NDapALk~AdVG 648 (892)
.+-.|+-|..+.+.+.... +.+.|+||..+|+.|-++|++-
T Consensus 251 -------------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 251 -------------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp -------------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred -------------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 1234677777777774443 4468899999999999999875
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.11 E-value=0.044 Score=57.95 Aligned_cols=42 Identities=12% Similarity=0.195 Sum_probs=34.6
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCC---HHHHHHHHHHcCCC
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDN---IQTARAIALECGIL 568 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn---~~TA~aIA~~~GI~ 568 (892)
.++.|++.++++.|++.|+++.++||.. .......-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4678999999999999999999999988 34444555677886
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.03 E-value=0.02 Score=56.53 Aligned_cols=96 Identities=16% Similarity=0.085 Sum_probs=60.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecC---------------CHHHHHHHHHHcCCCCCcCCCCCCceecc----hhhhhc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGD---------------NIQTARAIALECGILTSEADATEPNIIEG----KSFRAL 588 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGD---------------n~~TA~aIA~~~GI~~~~~~~~~~~vi~G----~~~~~l 588 (892)
++.|++.++++.|++.|+++.++|+- ....+..+.+..|+.- + .+++.+ .+...
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f-d-----~v~~s~~~~~~~~~~- 114 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF-D-----EVLICPHLPADECDC- 114 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE-E-----EEEEECCCGGGCCSS-
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe-e-----EEEEcCCCCcccccc-
Confidence 57899999999999999999999997 4667778888888751 0 111221 11000
Q ss_pred CHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeE
Q 043305 589 SETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL 649 (892)
Q Consensus 589 ~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGI 649 (892)
..-.|+-=..+.+.+.-..+.+.++||+.+|..+-++|++-.
T Consensus 115 -------------------~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~ 156 (176)
T 2fpr_A 115 -------------------RKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGING 156 (176)
T ss_dssp -------------------STTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred -------------------cCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeE
Confidence 000111001112222223456889999999999999998863
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=93.52 E-value=0.63 Score=47.59 Aligned_cols=43 Identities=21% Similarity=0.245 Sum_probs=32.0
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEe---cCCHHHHHHHHHHcCCCC
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVT---GDNIQTARAIALECGILT 569 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvT---GDn~~TA~aIA~~~GI~~ 569 (892)
++.-+++.++++.+++.|+++..+| |.........-++.|+..
T Consensus 22 ~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 22 DAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp --CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 3444688899999999999999999 666666656556777753
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=93.03 E-value=0.07 Score=58.38 Aligned_cols=128 Identities=13% Similarity=0.090 Sum_probs=73.2
Q ss_pred ecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHc----CCCCCcCCCCCCceecc-hhhhhcC-HHHHHHHhc
Q 043305 525 IKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALEC----GILTSEADATEPNIIEG-KSFRALS-ETQREEIAG 598 (892)
Q Consensus 525 i~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~----GI~~~~~~~~~~~vi~G-~~~~~l~-~~e~~~i~~ 598 (892)
....+.|+..+.++.++++|++|++|||-+...++.+|.+. ||..++.-.. ...++. ..-..+. ..+..+-..
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~-~~~~~~~~~~~~~~~~~~~~dg~y 218 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGV-TTLLKNRKTGELTTARKQIAEGKY 218 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEE-CEEEECTTTCCEECHHHHHHTTCC
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEee-eeeeeccccccccccccccccccc
Confidence 33457899999999999999999999999999999999984 6654321000 000110 0000000 001110000
Q ss_pred --ccccceEEEe-----ccCHhhHHHHHHHHHHc-CCeEEEeCCC-CCChHhhhc--CCeeEeecC
Q 043305 599 --EDFGMICVMG-----RSSPSDKLLLVQALRKR-GDVVAVTGDG-TNDAPALHE--ADIGLAMGI 653 (892)
Q Consensus 599 --~~~~~~~V~a-----R~sP~dK~~lV~~Lq~~-g~vVa~tGDG-~NDapALk~--AdVGIAmgi 653 (892)
.......+-. .+--+-|..-++..... +..+++.||+ ..|.+||.. ++.|+.+-+
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~i 284 (327)
T 4as2_A 219 DPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWV 284 (327)
T ss_dssp CGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEEE
T ss_pred cccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEEE
Confidence 0000111111 22246687777766543 3568899999 479999965 555665543
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=91.47 E-value=0.23 Score=52.00 Aligned_cols=94 Identities=18% Similarity=0.197 Sum_probs=64.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHc---CCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccce
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALEC---GILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~---GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~ 604 (892)
++.|++.++++.|+++|+++.++|.-+...+..+-+.. |+...-. .++.+ +..
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd-----~i~~~-~~~------------------ 185 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVD-----GHFDT-KIG------------------ 185 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCS-----EEECG-GGC------------------
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhcc-----EEEec-CCC------------------
Confidence 68999999999999999999999999988888776643 4542111 12221 110
Q ss_pred EEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 605 CVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 605 ~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
..-.|+-=..+.+.+.-..+.+.|+||..+|..+=++|++-
T Consensus 186 ---~KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~ 226 (261)
T 1yns_A 186 ---HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVH 226 (261)
T ss_dssp ---CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCE
T ss_pred ---CCCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCE
Confidence 12223322334444443456799999999999999999974
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=88.98 E-value=0.33 Score=49.88 Aligned_cols=93 Identities=11% Similarity=0.104 Sum_probs=62.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|++.|+++.++|... .+..+-+.+|+...-. .++.+.+...
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd-----~i~~~~~~~~-------------------- 147 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFT-----FCADASQLKN-------------------- 147 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCS-----EECCGGGCSS--------------------
T ss_pred cccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhccccc-----cccccccccC--------------------
Confidence 568999999999999999999999754 3566677888864321 2333322210
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI 647 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV 647 (892)
.+-.|+-=....+.+.-..+.+.|+||..+|..|=++|++
T Consensus 148 ~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~ 187 (243)
T 4g9b_A 148 SKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGM 187 (243)
T ss_dssp CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTC
T ss_pred CCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 1122333233344443345779999999999999999986
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=87.97 E-value=0.097 Score=53.27 Aligned_cols=88 Identities=16% Similarity=0.165 Sum_probs=53.8
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHH----cCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccce
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALE----CGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~----~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~ 604 (892)
+.+++.+.++.|+++|+++.++|+.....+..+.+. .+... .|. ..
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~-----------~~~-------------------~~ 138 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA-----------TNM-------------------NP 138 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT-----------TTB-------------------CC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc-----------ccc-------------------ch
Confidence 467999999999999999999999864433222222 22210 000 00
Q ss_pred EEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 605 CVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 605 ~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
..+....|. ...+.+.+++.|- +.++||..+|..+-+.|++-
T Consensus 139 ~~~~~~KP~-p~~~~~~~~~~g~-~l~VGDs~~Di~aA~~aG~~ 180 (211)
T 2b82_A 139 VIFAGDKPG-QNTKSQWLQDKNI-RIFYGDSDNDITAARDVGAR 180 (211)
T ss_dssp CEECCCCTT-CCCSHHHHHHTTE-EEEEESSHHHHHHHHHTTCE
T ss_pred hhhcCCCCC-HHHHHHHHHHCCC-EEEEECCHHHHHHHHHCCCe
Confidence 011112221 1122344455554 99999999999999999875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=87.12 E-value=0.12 Score=55.18 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=26.9
Q ss_pred HHhCCceeecccccccc---------CceeEEEeCCCCCcccCce
Q 043305 298 MMADKALVRRLSACETM---------GSATTICSDKTGTLTLNQM 333 (892)
Q Consensus 298 m~k~~~lVr~l~a~Etl---------G~vt~IcsDKTGTLT~n~M 333 (892)
+.|.++++|+..++|.+ .+.. |+||||||||+...
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 46788999999999874 2233 56799999998654
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=85.91 E-value=11 Score=36.46 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=23.6
Q ss_pred HHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecC
Q 043305 474 FKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKD 527 (892)
Q Consensus 474 ~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~D 527 (892)
+.+.+..+..+|..++.+|. |-.++|++++.|
T Consensus 134 ~~~~~~~~~~~G~T~v~va~----------------------dg~~~g~i~l~D 165 (165)
T 2arf_A 134 VSDAMTDHEMKGQTAILVAI----------------------DGVLCGMIAIAD 165 (165)
T ss_dssp HHHHHHHHHTTTSEEEEEEE----------------------TTEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEE----------------------CCEEEEEEEEEC
Confidence 34455667788988888884 236899999987
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=83.86 E-value=1.6 Score=49.06 Aligned_cols=40 Identities=15% Similarity=0.206 Sum_probs=33.5
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCC------------HHHHHHHHHHcCCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDN------------IQTARAIALECGIL 568 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn------------~~TA~aIA~~~GI~ 568 (892)
+-|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999955 22367778888874
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=83.59 E-value=1.1 Score=50.52 Aligned_cols=97 Identities=12% Similarity=0.132 Sum_probs=58.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecC------CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGD------NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDF 601 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGD------n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~ 601 (892)
++.|++.++++.|+++|+++.++|+- ......... .|+... ...++.+.+...
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~-----fd~i~~~~~~~~-------------- 158 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMH-----FDFLIESCQVGM-------------- 158 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTT-----SSEEEEHHHHTC--------------
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhh-----eeEEEeccccCC--------------
Confidence 57899999999999999999999985 222111111 133211 012333322110
Q ss_pred cceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee
Q 043305 602 GMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM 651 (892)
Q Consensus 602 ~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm 651 (892)
..-.|+-=..+.+.+.-..+.+.++||..||..+-+.|++....
T Consensus 159 ------~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 159 ------VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp ------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ------CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 11223333334444443456788889999999999999987654
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=83.26 E-value=0.73 Score=49.10 Aligned_cols=53 Identities=15% Similarity=0.164 Sum_probs=37.7
Q ss_pred CCeEEEeCCCC-CChHhhhcCCeeEeecCCC---cHhhh---------hcccEEEcCCCchHHHHHHH
Q 043305 626 GDVVAVTGDGT-NDAPALHEADIGLAMGIQG---TEVAK---------ESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 626 g~vVa~tGDG~-NDapALk~AdVGIAmgi~g---t~vAk---------eaaDiil~ddnf~sIv~~i~ 680 (892)
.+.+.|+||+. ||..|.+.|++...+=..| .+..+ ..+|+++.+ +..+...++
T Consensus 232 ~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~--l~el~~~l~ 297 (306)
T 2oyc_A 232 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVES--IADLTEGLE 297 (306)
T ss_dssp GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESS--GGGGGGGC-
T ss_pred hHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECC--HHHHHHHHH
Confidence 36799999996 9999999999987762222 22222 368999854 888877763
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=82.17 E-value=2.3 Score=43.79 Aligned_cols=118 Identities=14% Similarity=0.087 Sum_probs=62.7
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHH--HHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQT--ARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~T--A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
..++.+++.++++.|+ .|+++ ++|..+... +.. ....-..+. .-++.+... .
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~-----------------~~~~~~~l~----~~f~~~~~~---~ 177 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERG-----------------LLPGAGSVV----TFVETATQT---K 177 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTE-----------------EEECHHHHH----HHHHHHHTC---C
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCC-----------------cccCCcHHH----HHHHHHhCC---C
Confidence 4567899999999997 89997 777644311 000 000000010 011122210 1
Q ss_pred eEEEeccCHhhHHHHHHHHHHcCCeEEEeCCC-CCChHhhhcCCee---EeecCCCcHhhhh---cccEEEcC
Q 043305 604 ICVMGRSSPSDKLLLVQALRKRGDVVAVTGDG-TNDAPALHEADIG---LAMGIQGTEVAKE---SSDIIILD 669 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG-~NDapALk~AdVG---IAmgi~gt~vAke---aaDiil~d 669 (892)
......-.|+-=..+.+.+.-..+.+.|+||+ .||..+-++|++. +..|....+..++ .+|+++.+
T Consensus 178 ~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~ 250 (264)
T 1yv9_A 178 PVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 250 (264)
T ss_dssp CEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred ccccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEec
Confidence 11122223333233333333234679999999 6999999999976 5555322222333 58998754
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=81.81 E-value=1.3 Score=42.28 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=34.6
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCC---HHHHHHHHHHcCCCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDN---IQTARAIALECGILT 569 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn---~~TA~aIA~~~GI~~ 569 (892)
+-|++.++|++++++|++++++||.+ ...+....++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 34699999999999999999999998 566677777888853
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 892 | ||||
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 9e-40 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-20 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 5e-39 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 8e-37 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-33 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 1e-23 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 5e-22 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 8e-17 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-09 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-07 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 2e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 9e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 3e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 4e-05 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 1e-04 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 3e-04 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 4e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 8e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 8e-04 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 151 bits (383), Expect = 9e-40
Identities = 58/269 (21%), Positives = 105/269 (39%), Gaps = 32/269 (11%)
Query: 640 PALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTV 699
P A I + + +AK+++ + S+ V GR++Y N+++FI++ ++
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYNNMKQFIRYLISS 245
Query: 700 NVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREP 759
NV +V F+ A L VQLLWVNL+ D L A AL PP +M R P +EP
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 760 LITNIMWRNLLIQASYQVSVLL---------------VLNFQGKRILNLESDSNAHSN-- 802
LI+ ++ + Y + + V Q + D
Sbjct: 306 LISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLD 365
Query: 803 ------KVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILI 856
T+ + V ++ N N+ ++ + N +G + +++ L LI
Sbjct: 366 CEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI 425
Query: 857 IQ--FLGKFASTTRLNWKHWIISVVIGFI 883
+ L L+ W++ + I
Sbjct: 426 LYVDPLPMIFKLKALDLTQWLMVLKISLP 454
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 93.6 bits (232), Expect = 2e-20
Identities = 43/255 (16%), Positives = 73/255 (28%), Gaps = 61/255 (23%)
Query: 150 SLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLI 209
S + + G+ D V + +G N P ++G+S W + E ++DL +
Sbjct: 6 SKSTEECLAYFGVSETTGLTPDQVK--RHLEKYGHNELPAEEGKSLWELVIEQFEDLLVR 63
Query: 210 ILMIAAAASLALGIKTEYL-------------------AGVRFVRFFTGHTKNAYGTIQF 250
IL++AA S L E A V +
Sbjct: 64 ILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYE 123
Query: 251 KAGKTKVSDAVD----------GAIKILTVAVTIVV------------------------ 276
A + + + L ++
Sbjct: 124 PAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKI 183
Query: 277 ------VAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTL 330
A+PEGLP +T LA R+M A+VR L + ET+G A + +
Sbjct: 184 AVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLI 243
Query: 331 NQMTVVEAYVGGRKM 345
+ +
Sbjct: 244 SSNVGEVVCIFLTAA 258
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 147 bits (371), Expect = 5e-39
Identities = 42/393 (10%), Positives = 105/393 (26%), Gaps = 54/393 (13%)
Query: 300 ADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVV----EAYVGGRKMNPTDSNSQLS 355
+ + L +G + I + + + + + K +SN +
Sbjct: 22 SALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDML 81
Query: 356 PMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVL 415
+V S+ + I + +A + + + + + + +
Sbjct: 82 FIVFSIHLIDILKKL----------------SHDEIEAFMYQDEPVELKLQNISTNLADC 125
Query: 416 HVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFK 475
+ N+ + A + + + L + K
Sbjct: 126 FNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH---------------VSDATLFSLK 170
Query: 476 KAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKD 535
A+ +A + + + YE + +++L VK
Sbjct: 171 GALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRP--------VDEVKV 222
Query: 536 AIRLCRIAGVKVRMVTGDNIQTARAIALECGILT--SEADATEPNIIEGKSFRALSETQR 593
+ + AG ++ + TG G+L + +
Sbjct: 223 LLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPL 282
Query: 594 EEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEAD---IGLA 650
+ + + + Q D V + GD D + + IG
Sbjct: 283 GKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL 342
Query: 651 MGIQGTEVAKE----SSDIIILDDNFASVVKVV 679
G++G + A E +D +I ++ + V+
Sbjct: 343 TGLKGKDAAGELEAHHADYVI--NHLGELRGVL 373
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 134 bits (337), Expect = 8e-37
Identities = 64/167 (38%), Positives = 91/167 (54%), Gaps = 6/167 (3%)
Query: 516 DLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADAT 575
D DP R V +I+LCR AG++V M+TGDN TA AI GI +
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA 67
Query: 576 EPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDG 635
+ G+ F L ++ E C R PS K +V+ L+ ++ A+TGDG
Sbjct: 68 D-RAYTGREFDDLPLAEQREA----CRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDG 122
Query: 636 TNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWG 682
NDAPAL +A+IG+AMG GT VAK +S++++ DDNF+++V V G
Sbjct: 123 VNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 126 bits (318), Expect = 1e-33
Identities = 35/212 (16%), Positives = 69/212 (32%), Gaps = 14/212 (6%)
Query: 333 MTVVEAYVGGRKMNPTDSNSQ-------LSPMVTSLLVEGIAQNTTGSVYLPPN--GGEA 383
MTV + + + Q SP T+L N N +
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 384 EVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHW- 442
+ +G +E A+L+ + +R + FNS K + ++
Sbjct: 62 DTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLV 121
Query: 443 -KGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERI 501
KGA E +LD C+ I + + +D++ F+ A ++ R + +
Sbjct: 122 MKGAPERILDRCS-SILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKF 180
Query: 502 PDEEELSR--WALPEDDLVLLAIVGIKDPCRP 531
P + P + L + ++ + D
Sbjct: 181 PRGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 95.2 bits (236), Expect = 1e-23
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 38/165 (23%)
Query: 516 DLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADAT 575
D G D + S K A++ + G+KV M+TGDN ++A AI
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAI-------------- 54
Query: 576 EPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDG 635
+ + V+ P K V+ L+ + VVA GDG
Sbjct: 55 ----------------------SRELNLDLVIAEVLPHQKSEEVKKLQAKE-VVAFVGDG 91
Query: 636 TNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680
NDAPAL +AD+G+A+G G++VA ES DI+++ D+ VV ++
Sbjct: 92 INDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 93.8 bits (232), Expect = 5e-22
Identities = 42/213 (19%), Positives = 67/213 (31%), Gaps = 31/213 (14%)
Query: 337 EAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQ 396
E + + + + L A S+ G E G TE A+
Sbjct: 34 EVLKNDKPIRSGQFDGLV------ELATICALCNDSSLDFNETKGVYEKVGEATETALTT 87
Query: 397 WGMKLGMNFEAVRS----------------ECSVLHVFPFNSLKKRGGVAVQLPNSEVHI 440
K+ + VR+ F+ +K V S
Sbjct: 88 LVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAA 147
Query: 441 HW-----KGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIED--MASSSLRCVAIAY 493
KGA E V+D C Y+ V M I++ +LRC+A+A
Sbjct: 148 VGNKMFVKGAPEGVIDRCN-YVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206
Query: 494 RTYERERIP-DEEELSRWALPEDDLVLLAIVGI 525
R +R ++ SR+ E DL + +VG+
Sbjct: 207 RDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 78.5 bits (192), Expect = 8e-17
Identities = 23/234 (9%), Positives = 62/234 (26%), Gaps = 17/234 (7%)
Query: 462 RLVQMDEDKLLTFKKAIEDMASS-SLRCVAIAYRTYERERIPDEEELSR---WALPEDDL 517
+ D D +T I ++ + + + + +E + R
Sbjct: 5 PFIICDFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKE 64
Query: 518 VLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEP 577
+ + V R ++ + + +++G + +
Sbjct: 65 EITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK--DRIYCNH 122
Query: 578 NIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTN 637
+ + K ++ L + + + GD
Sbjct: 123 ASFDNDYIHIDWPHSCK----------GTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVT 172
Query: 638 DAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQK 691
D A +D+ A E +++ + + D F + K + + V +Q
Sbjct: 173 DVEAAKLSDLCFARDYLLNECREQNLNHLPYQD-FYEIRKEIENVKEVQEWLQN 225
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.9 bits (136), Expect = 1e-09
Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 31/238 (13%)
Query: 436 SEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRT 495
SE+ + A + D D +++ + L +ED V+ R
Sbjct: 1 SELRKLFYSADAVCFD-------VDSTVIREEGIDELAKICGVEDA-------VSEMTRR 46
Query: 496 YERERIPDEEELSRWALPEDDL---VLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTG 552
+P + L+ V I P +++ + + V+V +++G
Sbjct: 47 AMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISG 106
Query: 553 DNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSP 612
+A + I + A L E AG D
Sbjct: 107 GFRSIVEHVASKLNIPATNVFANR-----------LKFYFNGEYAGFDETQ-PTAESGGK 154
Query: 613 SDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMG-IQGTEVAKESSDIIILD 669
+ L++ ++ + GDG D A AD + G + K+++ I D
Sbjct: 155 GKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 50.0 bits (118), Expect = 3e-07
Identities = 27/202 (13%), Positives = 57/202 (28%), Gaps = 52/202 (25%)
Query: 531 PSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTS-----------------EAD 573
+AIR G+ + +VTG+ +Q A A ++ G A
Sbjct: 22 EKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLAS 81
Query: 574 ATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVT- 632
E I+ + + + + + +M + + + + V +
Sbjct: 82 MDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSG 141
Query: 633 ---------------------------------GDGTNDAPALHEADIGLAMGIQGTEVA 659
GDG ND A +A+ Q ++
Sbjct: 142 FAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKIL 200
Query: 660 KESSDIIILDDNFASVVKVVRW 681
KE++D + + + +
Sbjct: 201 KENADYVTKKEYGEGGAEAIYH 222
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 47.5 bits (111), Expect = 2e-06
Identities = 30/223 (13%), Positives = 71/223 (31%), Gaps = 21/223 (9%)
Query: 462 RLVQMDEDKLLTFKKAIEDMASSSLRCVAIA--YRTYERERIPDEEELSR--WALPEDDL 517
+L+ D D L + I+++A + + + ++ E+ L + L + +
Sbjct: 5 KLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPI 64
Query: 518 VLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEP 577
+ + ++ I+ + G V +V+G I
Sbjct: 65 EKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKI---------------K 109
Query: 578 NIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTN 637
+ A ++ D + + + + + GDG N
Sbjct: 110 EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGAN 169
Query: 638 DAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680
D +A + +A + KE +DI I + ++K ++
Sbjct: 170 DISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILKYIK 210
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.4 bits (106), Expect = 9e-06
Identities = 24/199 (12%), Positives = 47/199 (23%), Gaps = 50/199 (25%)
Query: 531 PSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGI----------LTSEADATEPNII 580
++IR G+ V +++G+ I A+ + GI + + D +
Sbjct: 23 TKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFF 82
Query: 581 EGKSFRALSETQREE---------------------------------------IAGEDF 601
+ E +
Sbjct: 83 SNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYS 142
Query: 602 GMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE 661
+ G L + D + V GD ND P T+ K
Sbjct: 143 WHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKA 201
Query: 662 SSDIIILDDNFASVVKVVR 680
SD + + ++ +
Sbjct: 202 VSDFVSDYSYGEEIGQIFK 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 43.7 bits (102), Expect = 3e-05
Identities = 12/51 (23%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Query: 620 QALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDD 670
A + V GD ND L EA G+ V +E +
Sbjct: 139 IAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHT 188
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 43.8 bits (102), Expect = 4e-05
Identities = 27/140 (19%), Positives = 47/140 (33%), Gaps = 4/140 (2%)
Query: 553 DNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSP 612
++ + I + + ++ K AL + +G F + + G
Sbjct: 133 KPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKA 192
Query: 613 SDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNF 672
+ L++ V GD NDA L A AMG E K+ + D+N
Sbjct: 193 NGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNH 251
Query: 673 ASVVKVVRWGRSVYANIQKF 692
+ V++ V N F
Sbjct: 252 EGALNVIQA---VLDNTYPF 268
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 42.6 bits (99), Expect = 1e-04
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 627 DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680
+ AV GD ND L A G+AMG E K +D + L ++ V +++
Sbjct: 231 ETAAV-GDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 18/108 (16%), Positives = 33/108 (30%), Gaps = 1/108 (0%)
Query: 572 ADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAV 631
D +E + G + + +G + L++ D V V
Sbjct: 169 LDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLV 228
Query: 632 TGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679
GD ND L A+ T+ AK + ++ + V +
Sbjct: 229 VGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYL 275
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 40.7 bits (94), Expect = 4e-04
Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 627 DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680
+ + GD ND + A +G+A+ KE ++ + + V +
Sbjct: 214 EEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 39.9 bits (92), Expect = 8e-04
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 598 GEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTE 657
F + G + +++ + + GDG ND L A IG+AMG Q E
Sbjct: 174 YPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKE 232
Query: 658 VAKESSDIIILDDNFASVVKVVR 680
K ++D + + + K ++
Sbjct: 233 DVKAAADYVTAPIDEDGISKAMK 255
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 40.0 bits (92), Expect = 8e-04
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 627 DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680
+ + V GD ND EA + +AM E KE+SDI+ L +N + V V+
Sbjct: 207 EEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 892 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.98 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.97 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.93 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.24 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.16 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.99 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.97 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.93 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.89 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.87 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.84 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.82 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.8 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.73 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.7 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.65 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.6 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.45 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.19 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.61 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.51 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.36 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.29 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.18 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.05 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.62 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.53 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.4 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.02 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.85 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.7 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.63 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 95.52 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.48 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.37 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.27 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 94.5 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.3 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 93.91 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.35 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 91.86 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 91.72 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 90.54 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 88.83 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 88.53 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 86.67 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 86.17 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 86.1 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 84.8 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 83.99 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 80.96 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.9e-49 Score=458.44 Aligned_cols=206 Identities=23% Similarity=0.338 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHH
Q 043305 686 YANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIM 765 (892)
Q Consensus 686 ~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m 765 (892)
|.|++|+++|+++.|+..++..+++.++..+.|++|+|+||+|+++|++|+++|++|||++++|+|||++++++++++.|
T Consensus 232 ~~~~~k~i~~~l~~n~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~li~~~~ 311 (472)
T d1wpga4 232 YNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWL 311 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCSSCTHH
T ss_pred HHHhHHhhhhhhhhhHHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCCCccccCHHH
Confidence 44555556666666666667777888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccC-C-------------CC---------cccccccchhHHHHHHHHHHHhhhh
Q 043305 766 WRNLLIQASYQVSVLLVLNFQGKRILNLE-S-------------DS---------NAHSNKVKNTLIFNSFVLCQIFNEF 822 (892)
Q Consensus 766 ~~~i~~~ai~q~~v~~~l~~~g~~~~~~~-~-------------~~---------~~~~~~~~~T~~F~~fV~~qvfn~~ 822 (892)
|++++.+++++.++.+.++++........ + .+ .......++|++|++++++|+||.+
T Consensus 312 ~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~ 391 (472)
T d1wpga4 312 FFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNAL 391 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999877766655443221110 0 00 0112245689999999999999999
Q ss_pred cccCCCCcccccCCcchHHHHHHHHHHHHHHHHHH--HHhhhccccccCChHHHHHHHHHHHHHHHHHhhc
Q 043305 823 NARKPDEKNIFGGITKNRLFMGIVAVTLVLQILII--QFLGKFASTTRLNWKHWIISVVIGFIRLFEHPVL 891 (892)
Q Consensus 823 n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~v--~~~~~~f~~~~L~~~~w~~~i~~~~~~l~~~eiv 891 (892)
++|+.++..+.+++++|++++.++++++++|++++ |+++.+|+++||++.+|+++++++++.+++.|++
T Consensus 392 ~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El~ 462 (472)
T d1wpga4 392 NSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEIL 462 (472)
T ss_dssp TTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99998765566789999999999998888887775 5689999999999999999999999999999874
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.2e-36 Score=299.48 Aligned_cols=150 Identities=42% Similarity=0.687 Sum_probs=143.5
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
||+|++++++|+.||++||+|+|+|||+..||++||++|||+.++.+. ....++|.+++.+++.++.+..+ +..|
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~----~~~v 93 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV-ADRAYTGREFDDLPLAEQREACR----RACC 93 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCC-TTTEEEHHHHHHSCHHHHHHHHH----HCCE
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccc-ccccccccccchhhHHHHhhhhh----hhhh
Confidence 999999999999999999999999999999999999999999765432 34678999999999999999999 8999
Q ss_pred EeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHH
Q 043305 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWG 682 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~G 682 (892)
|||++|+||..+|+.||++|++|+|+|||+||+|||++|||||||| +|+++|+++||+++++|+|++|+++|+||
T Consensus 94 ~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 94 FARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp EESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred hhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999 99999999999999999999999999998
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.98 E-value=2.2e-32 Score=282.75 Aligned_cols=198 Identities=16% Similarity=0.195 Sum_probs=149.9
Q ss_pred eEEEEEEeCCcccCCCC-------CCCCCCHHHHHHHHHHHHhcCCCccccCCC---CCCccccCChHHHHHHHHHHHcC
Q 043305 333 MTVVEAYVGGRKMNPTD-------SNSQLSPMVTSLLVEGIAQNTTGSVYLPPN---GGEAEVSGSPTEKAILQWGMKLG 402 (892)
Q Consensus 333 M~V~~~~~~~~~~~~~~-------~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~---~~~~~~~g~ptE~ALl~~a~~~g 402 (892)
|||+++|++++.++... .....++....++..++. |+++.+..+++ ...+...|||||.||+.++.+.|
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l-cn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~ 80 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGL-CNRAVFKAGQENISVSKRDTAGDASESALLKCIELSC 80 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHH-SCCCCCC----------CCCCSCHHHHHHHHHHHHHH
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHH-hCCCccccCCCCCcccccccccChHHHHHHHHHHHhC
Confidence 99999999988664321 112234444444444444 44544422221 12456789999999999999999
Q ss_pred CChhhhhcccceeeeeccccCCceeEEEEecC--CCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHH
Q 043305 403 MNFEAVRSECSVLHVFPFNSLKKRGGVAVQLP--NSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIED 480 (892)
Q Consensus 403 ~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~--~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~ 480 (892)
.++..+|+++++++.+||||+||||+++++.+ ++.+++|+|||||+||++|++++. +|+..+|+++.++.+.+.+++
T Consensus 81 ~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~ 159 (214)
T d1q3ia_ 81 GSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLE 159 (214)
T ss_dssp SCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHH
T ss_pred CCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHH
Confidence 99999999999999999999999999999875 456899999999999999999875 788999999999999999999
Q ss_pred HHhccCeEEEEEEeccccCCCCchhh--hhhccCCCCCcEEEEEEEecCCCchh
Q 043305 481 MASSSLRCVAIAYRTYERERIPDEEE--LSRWALPEDDLVLLAIVGIKDPCRPS 532 (892)
Q Consensus 481 ~a~~glR~l~~Ayk~~~~~~~~~~~~--~~~~~~~e~~l~~lGlvgi~DplR~~ 532 (892)
||++|+||||+|||+++.++++.... .+..+.+++||+|+|++||+||||+.
T Consensus 160 ~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 160 LGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred HhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 99999999999999998766543221 22345678999999999999999974
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.97 E-value=8.5e-36 Score=334.55 Aligned_cols=332 Identities=11% Similarity=0.013 Sum_probs=235.5
Q ss_pred eccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccc
Q 043305 306 RRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEV 385 (892)
Q Consensus 306 r~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~ 385 (892)
+-+.+.|+||..++||+|||||+|.|+|++..+..+..... -....++.+ ++++....+|+... ..+.
T Consensus 28 ~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~--~k~~g~n~~-~dl~~~~~~~~~~~---------~~~~ 95 (380)
T d1qyia_ 28 ELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNK--LKSLGLNSN-WDMLFIVFSIHLID---------ILKK 95 (380)
T ss_dssp HHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHH--HHHTTCCCH-HHHHHHHHHHHHHH---------HHTT
T ss_pred HHhhchhhcccceeeecCcccchhhhhheeeeecchhhhHh--hhhcCCChh-HHHHHHHHHHHHHH---------HHhh
Confidence 55678899999999999999999999998864332110000 000112222 23332222332211 1123
Q ss_pred cCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccc
Q 043305 386 SGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQ 465 (892)
Q Consensus 386 ~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~ 465 (892)
.++|++.+++...+..+......++.+.....+||+|.+|+|+++....++.+....||+++.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~--------------- 160 (380)
T d1qyia_ 96 LSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH--------------- 160 (380)
T ss_dssp SCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT---------------
T ss_pred cCCCcHHHHHHHHhhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC---------------
Confidence 58899999998776666666777888888889999999999998876555555666778877542
Q ss_pred cCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCC--chhHHHHHHHHHhC
Q 043305 466 MDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPC--RPSVKDAIRLCRIA 543 (892)
Q Consensus 466 l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~Dpl--R~~v~~aI~~l~~A 543 (892)
+++..+..+++.+..++.+|+|++++||+.++..+ .....+....|+++.+||+ |+|++++++.||++
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~----------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~a 230 (380)
T d1qyia_ 161 VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE----------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGA 230 (380)
T ss_dssp CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHH----------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccc----------cccchhhHhcccccccccccchhhHHHHHHHHHHC
Confidence 23334455677888999999999999998765311 1122344556888899985 55999999999999
Q ss_pred CCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHH-----hcccccceEEEeccCHhhHHHH
Q 043305 544 GVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEI-----AGEDFGMICVMGRSSPSDKLLL 618 (892)
Q Consensus 544 GI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i-----~~~~~~~~~V~aR~sP~dK~~l 618 (892)
||++.|+|||+..+|+++++++||...-. ...+++|.+............ -+..+....+++|++|++|..+
T Consensus 231 Gi~v~i~Tg~~~~~a~~il~~lgl~~~F~---~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~i 307 (380)
T d1qyia_ 231 GFELGIATGRPYTETVVPFENLGLLPYFE---ADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYIN 307 (380)
T ss_dssp TCEEEEECSSCHHHHHHHHHHHTCGGGSC---GGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHH
T ss_pred CCeEEEECCCCHHHHHHHHHHcCCcccCC---cceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHH
Confidence 99999999999999999999999975321 123555554322111000000 0000113456789999999999
Q ss_pred HHHHHHcCCeEEEeCCCCCChHhhhcCC---eeEeecCCCcHhhhh----cccEEEcCCCchHHHHHH
Q 043305 619 VQALRKRGDVVAVTGDGTNDAPALHEAD---IGLAMGIQGTEVAKE----SSDIIILDDNFASVVKVV 679 (892)
Q Consensus 619 V~~Lq~~g~vVa~tGDG~NDapALk~Ad---VGIAmgi~gt~vAke----aaDiil~ddnf~sIv~~i 679 (892)
++.++..++.|+|||||.||+||+|+|| |||+||..|++++++ .||+++ |++..|.+++
T Consensus 308 v~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 308 KQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp CCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred HHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 9999999999999999999999999999 999999999987665 899999 4588887665
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=4.9e-30 Score=245.17 Aligned_cols=123 Identities=40% Similarity=0.598 Sum_probs=108.8
Q ss_pred EEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcc
Q 043305 520 LAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGE 599 (892)
Q Consensus 520 lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~ 599 (892)
.+.+|++||+|++++++|+.|+++||+++|+|||+..||.++|++|||.
T Consensus 13 ~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~------------------------------- 61 (135)
T d2b8ea1 13 TLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------- 61 (135)
T ss_dssp CCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------------
T ss_pred EEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-------------------------------
Confidence 4468999999999999999999999999999999999999999999994
Q ss_pred cccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 600 DFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 600 ~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
.++++++|++|..+|+.+|+ |++|+|+|||.||+|||++|||||||| +++++++++||++|++++|++|+++|
T Consensus 62 -----~v~~~~~p~~k~~~v~~~q~-~~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI 134 (135)
T d2b8ea1 62 -----LVIAEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 134 (135)
T ss_dssp -----EEECSCCHHHHHHHHHHHTT-TSCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHH
T ss_pred -----hhccccchhHHHHHHHHHHc-CCEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHh
Confidence 58999999999999999986 569999999999999999999999999 89999999999999999999999987
Q ss_pred H
Q 043305 680 R 680 (892)
Q Consensus 680 ~ 680 (892)
+
T Consensus 135 ~ 135 (135)
T d2b8ea1 135 Q 135 (135)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.93 E-value=2e-26 Score=241.67 Aligned_cols=168 Identities=24% Similarity=0.233 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhh----------------hcccceeeeec
Q 043305 356 PMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAV----------------RSECSVLHVFP 419 (892)
Q Consensus 356 ~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~----------------r~~~~i~~~~p 419 (892)
+.+.+++..++.|| ++.+...++++.+...|+|||.||+.++.+.|++.... +..+++++.+|
T Consensus 48 ~~l~~ll~~~~LCn-~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p 126 (239)
T d1wpga3 48 DGLVELATICALCN-DSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLE 126 (239)
T ss_dssp HHHHHHHHHHHHSC-SCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHHHHhcC-CCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEee
Confidence 44555555555554 45454444456788899999999999999999876543 45789999999
Q ss_pred cccCCceeEEEEecCCC-----cEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHH--HhccCeEEEEE
Q 043305 420 FNSLKKRGGVAVQLPNS-----EVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDM--ASSSLRCVAIA 492 (892)
Q Consensus 420 F~S~rK~msvvv~~~~~-----~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~--a~~glR~l~~A 492 (892)
|||+||||+|+++.+++ .+++|+|||||.||++|++++. +|+..+++++.++.+.+.++++ |++|+||||+|
T Consensus 127 F~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A 205 (239)
T d1wpga3 127 FSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALA 205 (239)
T ss_dssp EETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEE
T ss_pred ecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEE
Confidence 99999999999997654 4789999999999999998876 6778899999999999999986 78999999999
Q ss_pred EeccccCCCCch-hhhhhccCCCCCcEEEEEEEe
Q 043305 493 YRTYERERIPDE-EELSRWALPEDDLVLLAIVGI 525 (892)
Q Consensus 493 yk~~~~~~~~~~-~~~~~~~~~e~~l~~lGlvgi 525 (892)
||+++.+..... ......+.+|+||+|+|++||
T Consensus 206 ~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 206 TRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred EEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 999975432111 111223446899999999997
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.24 E-value=1.3e-11 Score=124.52 Aligned_cols=153 Identities=20% Similarity=0.181 Sum_probs=107.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecch----------------hh------
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGK----------------SF------ 585 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~----------------~~------ 585 (892)
.+.+++.+++++++++|++|+++||+....+..+++.+++..+....++..+.... ++
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 46789999999999999999999999999999999999886431110011000000 00
Q ss_pred ------------------hhcCHHHHHHHhcccccce-------EEEeccCHhhHHHHHHHHHHc----CCeEEEeCCCC
Q 043305 586 ------------------RALSETQREEIAGEDFGMI-------CVMGRSSPSDKLLLVQALRKR----GDVVAVTGDGT 636 (892)
Q Consensus 586 ------------------~~l~~~e~~~i~~~~~~~~-------~V~aR~sP~dK~~lV~~Lq~~----g~vVa~tGDG~ 636 (892)
.....+.+.+++.+..... .+-......+|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 0011223333332211111 112223446788888877664 46799999999
Q ss_pred CChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 637 NDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 637 NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
||.|||+.||+||||| ++++.+|++||+|+.+++..++++++++
T Consensus 179 NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~ 222 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 222 (230)
T ss_dssp GGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 9999999999999999 9999999999999999899999888765
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.16 E-value=5.4e-11 Score=120.89 Aligned_cols=154 Identities=17% Similarity=0.200 Sum_probs=105.6
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchh----------------------
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKS---------------------- 584 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~---------------------- 584 (892)
..+.+++.+++++|++.|++++++||++...+..++...|+..+-...++..+.+...
T Consensus 19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (225)
T d1l6ra_ 19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 98 (225)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhc
Confidence 3567899999999999999999999999999999999999865321111111111000
Q ss_pred ---------hhh------cCHHHHHHHhccc-ccceEEE-------eccCHhhHHHHHHHHHHc----CCeEEEeCCCCC
Q 043305 585 ---------FRA------LSETQREEIAGED-FGMICVM-------GRSSPSDKLLLVQALRKR----GDVVAVTGDGTN 637 (892)
Q Consensus 585 ---------~~~------l~~~e~~~i~~~~-~~~~~V~-------aR~sP~dK~~lV~~Lq~~----g~vVa~tGDG~N 637 (892)
++. ...++.+.+.... .....++ -.....+|...++.|.++ .+.|+++|||.|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~n 178 (225)
T d1l6ra_ 99 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 178 (225)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred CcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcc
Confidence 000 0111111111100 0011111 112245888888877664 345888899999
Q ss_pred ChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 638 DAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 638 DapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
|.+|++.|++||||+ ++.+.+|+.||+|...++..+|.+++++
T Consensus 179 D~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 179 DMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred hHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 999999999999999 8999999999999999999999998863
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.99 E-value=5.3e-10 Score=116.88 Aligned_cols=67 Identities=28% Similarity=0.371 Sum_probs=59.7
Q ss_pred hHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 614 DKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 614 dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
+|..-++.+.+. .+.|+++|||.||.+||+.|+.|+||+ ++++.+|+.||++....+-.+|.++|++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 799999998774 356999999999999999999999999 9999999999999988777888888753
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.97 E-value=1.6e-10 Score=117.50 Aligned_cols=126 Identities=17% Similarity=0.256 Sum_probs=93.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCcee-cchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNII-EGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi-~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
+++|++.+.++.||+.|++++++||.....+..+++.+||...+.-.+...+. +|. ..-
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~--------------------~~g 141 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGE--------------------YAG 141 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSC--------------------EEE
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhc--------------------ccc
Confidence 36899999999999999999999999999999999999996421100000000 111 111
Q ss_pred Ee----ccCHhhHHHHHHHHHHc--CCeEEEeCCCCCChHhhhcCCeeEeecCC-CcHhhhhcccEEEcCCCchHH
Q 043305 607 MG----RSSPSDKLLLVQALRKR--GDVVAVTGDGTNDAPALHEADIGLAMGIQ-GTEVAKESSDIIILDDNFASV 675 (892)
Q Consensus 607 ~a----R~sP~dK~~lV~~Lq~~--g~vVa~tGDG~NDapALk~AdVGIAmgi~-gt~vAkeaaDiil~ddnf~sI 675 (892)
+- -..+..|..+++.++++ -+.+.++|||.||.+|++.||+|||+|.+ ..+..++.+|.++.+ |..|
T Consensus 142 ~~~~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~--f~el 215 (217)
T d1nnla_ 142 FDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVEL 215 (217)
T ss_dssp ECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGG
T ss_pred ceeeeeeeccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC--HHHh
Confidence 11 13467899999999875 34689999999999999999999999833 345677889999864 6543
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.93 E-value=7.5e-10 Score=114.95 Aligned_cols=66 Identities=20% Similarity=0.253 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+|...++.+.+. .+.++++|||.||.+||+.|++|+||+ ++++..|+.||+|...++=.++.++++
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 699999988874 346899999999999999999999999 999999999999998777778888775
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.89 E-value=6.1e-10 Score=112.53 Aligned_cols=149 Identities=9% Similarity=0.035 Sum_probs=107.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+...... +....++...... .+ .......
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~a--n~~~~~~~~~~~~--------~~--~~~~~~~ 142 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYC--NHASFDNDYIHID--------WP--HSCKGTC 142 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEE--EEEECSSSBCEEE--------CT--TCCCTTC
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceee--eeEEEeCCcceec--------cc--ccccccc
Confidence 5789999999999999999999999999999999999987632100 0011111111000 00 0011234
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYA 687 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~ 687 (892)
++.+|..|..+++.++..++.|.++||+.||.+|+++||++||++..++.+.++..+++. -++|+.|...+.+-..+.+
T Consensus 143 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~ 221 (226)
T d2feaa1 143 SNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQE 221 (226)
T ss_dssp CSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHH
T ss_pred ccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHH
Confidence 567899999999999988999999999999999999999999998444444555555544 4579999988877655555
Q ss_pred HH
Q 043305 688 NI 689 (892)
Q Consensus 688 nI 689 (892)
.|
T Consensus 222 ~~ 223 (226)
T d2feaa1 222 WL 223 (226)
T ss_dssp HH
T ss_pred Hh
Confidence 44
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=5.5e-10 Score=115.97 Aligned_cols=67 Identities=30% Similarity=0.336 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 613 SDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 613 ~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
.+|..-++.|+++ .+.|.++|||.||.|||+.|+.|+||+ ++.+.+|+.||+|+.+.+-.++.++|+
T Consensus 189 ~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 189 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 3699999888764 246889999999999999999999999 999999999999998877778887775
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.84 E-value=3.9e-09 Score=103.80 Aligned_cols=107 Identities=19% Similarity=0.241 Sum_probs=86.2
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhh
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSD 614 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~d 614 (892)
.+|+.+++.|+.+.++||++...+...++++++.. ++.- ..+
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------------~~~~--~~~ 80 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------------FFLG--KLE 80 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------------EEES--CSC
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------------cccc--ccc
Confidence 48999999999999999999999999999999862 1111 234
Q ss_pred HHHHHHHHHH-c---CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC----chHHHHHHH
Q 043305 615 KLLLVQALRK-R---GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN----FASVVKVVR 680 (892)
Q Consensus 615 K~~lV~~Lq~-~---g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn----f~sIv~~i~ 680 (892)
|...++.+.+ . .+.|+++|||.||.|+|+.|++|+||+ ++.+.+|+.||+|+.... ++.+++.|.
T Consensus 81 K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il 153 (177)
T d1k1ea_ 81 KETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMIL 153 (177)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHHHHHHH
Confidence 5555554443 2 478999999999999999999999999 999999999999998776 444555543
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.82 E-value=3.3e-09 Score=110.12 Aligned_cols=66 Identities=26% Similarity=0.335 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC-chHHHHHHH
Q 043305 614 DKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN-FASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn-f~sIv~~i~ 680 (892)
.|...++.+.+. .+.|+++|||.||.+||+.||+|+||+ ++.+.+|+.||+|+..++ -..+.++++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 677777777664 467999999999999999999999999 999999999999997554 344555553
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.80 E-value=1.4e-08 Score=99.74 Aligned_cols=130 Identities=14% Similarity=0.093 Sum_probs=98.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+..++....++.+ +.+.++..+|+.............++...... ..+... .......
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-----~l~~~~----------------~~~~~~~ 126 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCH-----KLEIDD----------------SDRVVGY 126 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEE-----EEEECT----------------TSCEEEE
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcc-----eeeeec----------------ccccccc
Confidence 3456666777665 57899999999999999999999988642210 000000 0023344
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
....+..+...++.++...+.|+++|||.||.|||+.||+||||+ +..++.++++|++.. .|+..+++++..
T Consensus 127 ~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 127 QLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp ECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred cccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 455667777888888888999999999999999999999999996 778888899999876 478888887754
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.73 E-value=9.3e-09 Score=106.32 Aligned_cols=68 Identities=26% Similarity=0.347 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 613 SDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 613 ~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
.+|...++.|.++ .+.++++|||.||.+||+.|+.|+||+ ++++.+|+.||+|..+++=..+.++|++
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 3698888888764 467888899999999999999999999 9999999999999888778889888853
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.70 E-value=1e-08 Score=106.36 Aligned_cols=66 Identities=36% Similarity=0.451 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+|...|+.|.++ ...|+++|||.||.|||+.|++|+||| ++.+.+|+.||+|+.+.+-.++..+|+
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 699888888764 245788899999999999999999999 999999999999999888888888774
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.65 E-value=2e-08 Score=98.75 Aligned_cols=130 Identities=18% Similarity=0.200 Sum_probs=92.9
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
.++.+++.+.++.++..|..+.++||.....+....++.++...-. ......... ....
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~----------------~~~~ 132 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA-----NRLIVKDGK----------------LTGD 132 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE-----EEEEEETTE----------------EEEE
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhh-----hhhcccccc----------------cccc
Confidence 3678899999999999999999999999999999999988764211 000000000 0001
Q ss_pred E--eccCHhhHHHHHHHHH----HcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 607 M--GRSSPSDKLLLVQALR----KRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 607 ~--aR~sP~dK~~lV~~Lq----~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
. .-..+..|...++.+. -..+.+.++|||.||.||++.|++|||| ++.+..|+.||+|+..+|+..|.++|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 133 VEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp EECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccccccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 1 1111223333333333 2356788999999999999999999999 68889999999999888888887654
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.60 E-value=3e-08 Score=100.24 Aligned_cols=44 Identities=11% Similarity=0.004 Sum_probs=39.1
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCC
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTS 570 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~ 570 (892)
+...+.+++++++++++|+++.++||++...+..+.+++|+..+
T Consensus 16 ~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~ 59 (243)
T d1wzca1 16 GYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETP 59 (243)
T ss_dssp SSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSC
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccccc
Confidence 34456789999999999999999999999999999999998653
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.45 E-value=2.1e-07 Score=94.71 Aligned_cols=148 Identities=16% Similarity=0.120 Sum_probs=96.0
Q ss_pred hHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcC--CCCCCceecchhhh----h-----c------------
Q 043305 532 SVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEA--DATEPNIIEGKSFR----A-----L------------ 588 (892)
Q Consensus 532 ~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~--~~~~~~vi~G~~~~----~-----l------------ 588 (892)
+...++.++++.|+.+.++||.+...+..+.++.|+..++. ..+++.+....... + .
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 44556777789999999999999999999999999875532 11122222111100 0 0
Q ss_pred ------------------------CH---HHHHHHhcccccceEE--------EeccCHhhHHHHHHHHHHc-C---CeE
Q 043305 589 ------------------------SE---TQREEIAGEDFGMICV--------MGRSSPSDKLLLVQALRKR-G---DVV 629 (892)
Q Consensus 589 ------------------------~~---~e~~~i~~~~~~~~~V--------~aR~sP~dK~~lV~~Lq~~-g---~vV 629 (892)
.+ +++.+...+....... ---....+|...++.|.+. | +.|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 00 1122222111111111 1112345799999998875 2 458
Q ss_pred EEeCCCCCChHhhhcCCeeEeecCCCcHhhhhccc-------EEEcCCCchHHHHHHH
Q 043305 630 AVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSD-------IIILDDNFASVVKVVR 680 (892)
Q Consensus 630 a~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaD-------iil~ddnf~sIv~~i~ 680 (892)
.++|||.||.|||+.||.|++|| ++.+..|+.|| ++-..++-.+|.++++
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHH
Confidence 88999999999999999999999 89999898888 4544555667777765
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.19 E-value=3.9e-06 Score=83.25 Aligned_cols=41 Identities=12% Similarity=0.006 Sum_probs=37.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL 568 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~ 568 (892)
.+.+.+.+++++++++|+.++++||.+...+..+.+++|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 35678899999999999999999999999999999999985
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.61 E-value=3.5e-06 Score=83.74 Aligned_cols=54 Identities=19% Similarity=0.319 Sum_probs=46.7
Q ss_pred hhHHHHHHHHHHc-CCeEEEeCC----CCCChHhhhcCC-eeEeecCCCcHhhhhcccEEE
Q 043305 613 SDKLLLVQALRKR-GDVVAVTGD----GTNDAPALHEAD-IGLAMGIQGTEVAKESSDIII 667 (892)
Q Consensus 613 ~dK~~lV~~Lq~~-g~vVa~tGD----G~NDapALk~Ad-VGIAmgi~gt~vAkeaaDiil 667 (892)
-+|..-++.|.+. .+.|.++|| |-||.+||+.|+ .|+||+ ++.|.+|..+|+++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 4788888888764 567999999 569999999997 799999 99999999998865
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.51 E-value=2.9e-05 Score=76.49 Aligned_cols=61 Identities=18% Similarity=0.348 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 613 SDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 613 ~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
.+|..-++.|.++. .+.++||+.||.+||+.|+-|+||+ .|- ++.+|++.+.+ -..+...+
T Consensus 158 ~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~-~g~--~~~~A~~~~~~--~~ev~~~l 218 (229)
T d1u02a_ 158 VNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIK-VGE--GETHAKFHVAD--YIEMRKIL 218 (229)
T ss_dssp CCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEE-ESS--SCCCCSEEESS--HHHHHHHH
T ss_pred CCHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEE-eCC--CCccCeEEcCC--HHHHHHHH
Confidence 47999999998775 4567899999999999997666664 232 25678898864 44444333
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.36 E-value=0.00022 Score=70.64 Aligned_cols=125 Identities=19% Similarity=0.166 Sum_probs=84.6
Q ss_pred CCchhHHHHHHHHHhCC-CEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAG-VKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AG-I~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
++-||+.+.+++|++.| +++.++|+.....+..+.+..||...-. .++.+.+..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd-----~i~~~~~~~-------------------- 145 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP-----FGAFADDAL-------------------- 145 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS-----CEECTTTCS--------------------
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccccc-----ccccccccc--------------------
Confidence 34689999999999987 8999999999999999999999974321 222221100
Q ss_pred Eec-cCHhhHHHHHHHHHHc---CCeEEEeCCCCCChHhhhcCC---eeEeecCCCcH-hhhhcccEEEcCCCchHHHHH
Q 043305 607 MGR-SSPSDKLLLVQALRKR---GDVVAVTGDGTNDAPALHEAD---IGLAMGIQGTE-VAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 607 ~aR-~sP~dK~~lV~~Lq~~---g~vVa~tGDG~NDapALk~Ad---VGIAmgi~gt~-vAkeaaDiil~ddnf~sIv~~ 678 (892)
.+ -.|.--...++.+... .+.+.|+||+.+|..|-+.|+ |||+.|....+ ..+..+|+++. +|+.+.++
T Consensus 146 -~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~ 222 (228)
T d2hcfa1 146 -DRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEV 222 (228)
T ss_dssp -SGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHH
T ss_pred -cccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHHHH
Confidence 01 0122222233333322 367999999999999999999 55555633333 25556899984 58888877
Q ss_pred HH
Q 043305 679 VR 680 (892)
Q Consensus 679 i~ 680 (892)
+.
T Consensus 223 l~ 224 (228)
T d2hcfa1 223 LA 224 (228)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.29 E-value=0.00034 Score=72.98 Aligned_cols=135 Identities=12% Similarity=0.129 Sum_probs=82.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC-CCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD-ATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~-~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
++|+|+++.++.|++.||.+.++||--.....+++++.|+..++.. ..+..-+++..+. ..+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~-----------------~~~ 197 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVL-----------------KGF 197 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBE-----------------EEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeE-----------------eec
Confidence 5899999999999999999999999999999999999998754210 0000001111000 000
Q ss_pred Eec-cCHhhHHHHH----HHHHH--cCCeEEEeCCCCCChHhhhc---CCeeEeecC-C-CcH----hhhhcccEEEcCC
Q 043305 607 MGR-SSPSDKLLLV----QALRK--RGDVVAVTGDGTNDAPALHE---ADIGLAMGI-Q-GTE----VAKESSDIIILDD 670 (892)
Q Consensus 607 ~aR-~sP~dK~~lV----~~Lq~--~g~vVa~tGDG~NDapALk~---AdVGIAmgi-~-gt~----vAkeaaDiil~dd 670 (892)
-.. .....|..-+ ...+. ....|.++|||.||.+|.+. ++.+++.|- + ..+ .=+++-|||+.+|
T Consensus 198 ~~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d 277 (291)
T d2bdua1 198 KGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKE 277 (291)
T ss_dssp CSSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETC
T ss_pred cCCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecC
Confidence 000 0112222221 22222 34678889999999999874 455555552 1 111 1336889999988
Q ss_pred CchHHHHHH
Q 043305 671 NFASVVKVV 679 (892)
Q Consensus 671 nf~sIv~~i 679 (892)
.--.++..+
T Consensus 278 ~~~~v~~~i 286 (291)
T d2bdua1 278 ESLEVVNSI 286 (291)
T ss_dssp CBCHHHHHH
T ss_pred CChhHHHHH
Confidence 655554443
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.18 E-value=0.00013 Score=71.49 Aligned_cols=125 Identities=24% Similarity=0.333 Sum_probs=86.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++++.++.|++.|+++.++||.....+..+.+++||...-. .++.+.+.. .
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~-----~~~~~~~~~--------------------~ 149 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS-----EMLGGQSLP--------------------E 149 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS-----EEECTTTSS--------------------S
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcc-----ccccccccc--------------------c
Confidence 357999999999999999999999999999999999999864211 122111110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe---eEeecCCC-cHhhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI---GLAMGIQG-TEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV---GIAmgi~g-t~vAkeaaDiil~ddnf~sIv~~i 679 (892)
....|+--..+.+.++-..+.+.|+||..+|..+-+.|++ ++..|.+. .+.....+|+++.+ ++.+.+++
T Consensus 150 ~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~--l~dL~~ii 223 (224)
T d2hsza1 150 IKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILKIT 223 (224)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGGGT
T ss_pred ccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECC--HHHHHHhh
Confidence 1223444444555555557789999999999999999986 33333222 23455668999864 77776543
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.05 E-value=0.0005 Score=67.25 Aligned_cols=120 Identities=14% Similarity=0.201 Sum_probs=82.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.++++.|+++|+++.++|+.....+..+.+..|+...-. .++.+.+.. .
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~-----~i~~~~~~~--------------------~ 142 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD-----ALASAEKLP--------------------Y 142 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----EEEECTTSS--------------------C
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccccc-----ccccccccc--------------------c
Confidence 457999999999999999999999999999999999999963211 233332211 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHh----hhhcccEEEcCCCchHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV----AKESSDIIILDDNFASV 675 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~v----AkeaaDiil~ddnf~sI 675 (892)
++-.|+-=..+++.+.-..+.++++||+.+|..|-+.|++.. ++..+.+. ....||.++.+ |..+
T Consensus 143 ~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~-i~v~~~~~~~~~~~~~a~~~i~~--l~el 211 (218)
T d1te2a_ 143 SKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRS-IVVPAPEAQNDPRFVLANVKLSS--LTEL 211 (218)
T ss_dssp CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEE-EECCCTTTTTCGGGGGSSEECSC--GGGC
T ss_pred chhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEE-EEECCCCCccchhhcCCCEEECC--hhhC
Confidence 122233334455555445678999999999999999999743 33333222 23467888754 6543
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.62 E-value=0.0014 Score=63.48 Aligned_cols=121 Identities=15% Similarity=0.080 Sum_probs=81.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.+++.+.++.++..| ++.++|+.....++.+.+..|+...-. .++.+.+.
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd-----~v~~~~~~---------------------- 135 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD-----GIYGSSPE---------------------- 135 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS-----EEEEECSS----------------------
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccc-----cccccccc----------------------
Confidence 46789999999998775 899999999999999999999874321 22222111
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe---eEeecCCCcHh-hhhcccEEEcCCCchHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI---GLAMGIQGTEV-AKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV---GIAmgi~gt~v-AkeaaDiil~ddnf~sIv~~ 678 (892)
.+..|+--..+.+.++-..+.+.|+||+.||..|-+.|++ ++.-|....+. ....+|+++.+ +..+...
T Consensus 136 ~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~--l~el~~~ 208 (210)
T d2ah5a1 136 APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLAY 208 (210)
T ss_dssp CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHHH
T ss_pred ccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHHH
Confidence 1223333333333333335679999999999999999997 55445333333 44458999754 7766553
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.53 E-value=0.0073 Score=59.29 Aligned_cols=125 Identities=17% Similarity=0.186 Sum_probs=82.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.++++.|+ +|+++.++|+........+.+.+|+...-. .++.+.+.. .
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd-----~i~~s~~~~--------------------~ 153 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFD-----SITTSEEAG--------------------F 153 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCS-----EEEEHHHHT--------------------B
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccc-----ccccccccc--------------------c
Confidence 46899999999996 589999999999999999999999863211 222211110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCC-CCChHhhhcCCeeEeecCC---CcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDG-TNDAPALHEADIGLAMGIQ---GTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG-~NDapALk~AdVGIAmgi~---gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
.+-.|+-=..+.+.+.-..+.+.++||. .+|..+=++|++-. ++.+ ......+.+|+++.+ ++.++++++.
T Consensus 154 ~KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~-v~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~~ 228 (230)
T d1x42a1 154 FKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTS-ILLDRKGEKREFWDKCDFIVSD--LREVIKIVDE 228 (230)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEE-EEECTTSCCGGGGGGSSEEESS--TTHHHHHHHH
T ss_pred cchhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEE-EEECCCCCCcccccCCCEEECC--HHHHHHHHHH
Confidence 1112222223333333334679999997 68999988898742 3322 222345678999875 9999888763
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.40 E-value=0.0024 Score=63.95 Aligned_cols=127 Identities=19% Similarity=0.206 Sum_probs=85.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.++++.|++.|+++.++||.+...+..+-+..|+..... ..++.+.+.. .
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~----d~~~~~d~~~--------------------~ 154 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP----DFLVTPDDVP--------------------A 154 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC----SCCBCGGGSS--------------------C
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccc----cccccccccc--------------------c
Confidence 478999999999999999999999999999999999999864211 1233332211 1
Q ss_pred eccCHhhHHHHHHHHHHc-CCeEEEeCCCCCChHhhhcCCe---eEeecCCC---cH---------------------hh
Q 043305 608 GRSSPSDKLLLVQALRKR-GDVVAVTGDGTNDAPALHEADI---GLAMGIQG---TE---------------------VA 659 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~-g~vVa~tGDG~NDapALk~AdV---GIAmgi~g---t~---------------------vA 659 (892)
.+-.|+.=....+.+.-. .+.|+|+||..+|..+=+.|++ |++-|.+- ++ ..
T Consensus 155 ~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 234 (257)
T d1swva_ 155 GRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFV 234 (257)
T ss_dssp CTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 122344444445555432 4679999999999999999986 44333110 00 01
Q ss_pred hhcccEEEcCCCchHHHHHHH
Q 043305 660 KESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 660 keaaDiil~ddnf~sIv~~i~ 680 (892)
+..||+++.+ +..+..+|.
T Consensus 235 ~~gad~vi~~--l~eL~~ii~ 253 (257)
T d1swva_ 235 ENGAHFTIET--MQELESVME 253 (257)
T ss_dssp HTTCSEEESS--GGGHHHHHH
T ss_pred hCCCCEEECC--HHHHHHHHH
Confidence 1238999964 888887774
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.02 E-value=0.012 Score=56.12 Aligned_cols=63 Identities=21% Similarity=0.244 Sum_probs=44.1
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeE--ee--cCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 616 LLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL--AM--GIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 616 ~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGI--Am--gi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
..+.+.+.-.-+.+.|+||..+|..|=+.|+++- .+ |..-.+.....||+++.+ +..++++|+
T Consensus 115 ~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~--l~dl~~~ik 181 (182)
T d2gmwa1 115 LSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS--LADLPQAIK 181 (182)
T ss_dssp HHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC--GGGHHHHHH
T ss_pred cchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECC--HHHHHHHhc
Confidence 3444444434567999999999999999999853 22 322234556679999864 999888875
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.85 E-value=0.0048 Score=57.98 Aligned_cols=88 Identities=13% Similarity=-0.006 Sum_probs=61.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecC-CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGD-NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGD-n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
++.|++.++++.|++.|+++.++|+- ....++.+-+..++.... ..+
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~--------------------------------~~~ 93 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF--------------------------------IQR 93 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC--------------------------------SEE
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccc--------------------------------eee
Confidence 57899999999999999999999964 456667666766664211 012
Q ss_pred EeccCHh--hHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe
Q 043305 607 MGRSSPS--DKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI 647 (892)
Q Consensus 607 ~aR~sP~--dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV 647 (892)
.....|. .-..+.+.+.-..+.+.++||..+|..+-++|++
T Consensus 94 ~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~ 136 (164)
T d1u7pa_ 94 EIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGV 136 (164)
T ss_dssp EESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred ecccCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 2222233 3333334443346789999999999999999977
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.70 E-value=0.0016 Score=63.77 Aligned_cols=45 Identities=18% Similarity=0.301 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHHc-CCeEEEeCC----CCCChHhhhcCC-eeEeecCCCcHh
Q 043305 613 SDKLLLVQALRKR-GDVVAVTGD----GTNDAPALHEAD-IGLAMGIQGTEV 658 (892)
Q Consensus 613 ~dK~~lV~~Lq~~-g~vVa~tGD----G~NDapALk~Ad-VGIAmgi~gt~v 658 (892)
-+|..-++.|.+. .+.|.++|| |-||.+||+.|+ .|++++ +..|+
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~~~~ 234 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDT 234 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHH
T ss_pred cCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CHHHH
Confidence 3677667666543 578999999 789999999997 788886 54443
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.63 E-value=0.017 Score=56.99 Aligned_cols=125 Identities=15% Similarity=0.146 Sum_probs=80.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.++++.|++ |+++.++|+.........-+.+|+...-. .++.+.+.. .
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd-----~i~~s~~~~--------------------~ 162 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFD-----AIVIGGEQK--------------------E 162 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCS-----EEEEGGGSS--------------------S
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccccc-----ccccccccc--------------------c
Confidence 367999999999985 89999999999999999999999864311 122222111 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCC-CChHhhhcCCeeEeecCCCcH----hhhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGT-NDAPALHEADIGLAMGIQGTE----VAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~-NDapALk~AdVGIAmgi~gt~----vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
++-+|+==..+.+.+.-..+.+.|+||.. +|..+=+.|++.-....++.. .....+|+++.+ +..+.++++
T Consensus 163 ~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~--l~eL~~ll~ 238 (247)
T d2gfha1 163 EKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALLQ 238 (247)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHHH
T ss_pred chhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECC--HHHHHHHHH
Confidence 11122211223333333346799999985 899999999986333222211 123457888875 888888775
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=95.52 E-value=0.023 Score=51.62 Aligned_cols=107 Identities=11% Similarity=0.236 Sum_probs=69.5
Q ss_pred cCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccc
Q 043305 386 SGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQ 465 (892)
Q Consensus 386 ~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~ 465 (892)
+.||..+||+++|++.+..... .....-....||....+..++.+ ++ ..+..|++..+.+.+. .+|. .
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~---~g--~~v~~G~~~~~~~~~~----~~g~--~ 96 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRER-DVQSLHATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRRHVE----ANGG--H 96 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCC-CTTTTTCEEEEEETTTTEEEEEE---TT--EEEEEECHHHHHHHHH----HHTC--C
T ss_pred CCchHHHHHHHHHHHhcCCCcc-ccccccccccccccccceEEEEE---CC--EEEEecHHHHHHHHHH----HcCC--C
Confidence 4699999999999976532211 11233345667777766555543 23 2455788765543321 1111 1
Q ss_pred cCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCc
Q 043305 466 MDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCR 530 (892)
Q Consensus 466 l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR 530 (892)
++ ..+.+.+++++.+|..++.+|. |-.++|++++.|+++
T Consensus 97 ~~----~~~~~~~~~~~~~G~Tvv~Va~----------------------d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 97 FP----TDVDQKVDQVARQGATPLVVVE----------------------GSRVLGVIALKDIVK 135 (136)
T ss_dssp CC----HHHHHHHHHHHHTTSEEEEEEE----------------------TTEEEEEEEEEESSC
T ss_pred Cc----HHHHHHHHHHHHCCCeEEEEEE----------------------CCEEEEEEEEEeecC
Confidence 12 3567788999999999999983 347999999999986
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.48 E-value=0.003 Score=60.91 Aligned_cols=118 Identities=17% Similarity=0.203 Sum_probs=74.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.++++.|++.|+++.++|+... .+..+-+..||...-. .++.+.+. ..
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~-----~i~~s~~~--------------------~~ 135 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFT-----EILTSQSG--------------------FV 135 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEE-----EEECGGGC--------------------CC
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccc-----cccccccc--------------------cc
Confidence 3579999999999999999999998554 5667788899864211 12211111 01
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeE-eecCCCcHhhhhcccEEEcCCCchHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL-AMGIQGTEVAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGI-Amgi~gt~vAkeaaDiil~ddnf~sIv~~ 678 (892)
..-.|+--..+++.+.-..+.+.|+||+.+|..+-+.|++.. .+. .++. .+|..+. ++..|.++
T Consensus 136 ~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~~----~~~~~~~--~~~dl~~l 200 (204)
T d2go7a1 136 RKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-ESTY----EGNHRIQ--ALADISRI 200 (204)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCSC----TTEEECS--STTHHHHH
T ss_pred cchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc-CCCC----CcCeecC--CHHHHHHH
Confidence 122344444445555444578999999999999999999853 233 3322 3444443 35555544
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.37 E-value=0.0024 Score=61.84 Aligned_cols=120 Identities=10% Similarity=0.142 Sum_probs=79.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+ +++++.++|+-....+..+.+..|+...-. .++.+.+.. .
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~-----~i~~~~~~~--------------------~ 135 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRMA-----VTISADDTP--------------------K 135 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGEE-----EEECGGGSS--------------------C
T ss_pred ccccchhhhhhhhc-cccccccccccccccccccccccccccccc-----ccccccccc--------------------c
Confidence 35689999999997 589999999999999999999999864211 122221110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee---cCCCcHhhhhcccEEEcCCCchHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM---GIQGTEVAKESSDIIILDDNFASVV 676 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm---gi~gt~vAkeaaDiil~ddnf~sIv 676 (892)
..-.|+--..+++.++-..+.+.|+||+.+|..+=++|++...+ | ..+....+.+|.++. ++..|.
T Consensus 136 ~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 136 RKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGGG
T ss_pred chhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeC--CHHHHH
Confidence 11223333444444433346789999999999999999987553 3 233344567888874 466554
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.27 E-value=0.0095 Score=58.15 Aligned_cols=117 Identities=16% Similarity=0.136 Sum_probs=77.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
.+.||+.+.+++|++.|+++.++|+......+.....+|+..-.... ....+ +. ..
T Consensus 127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~--~~~~d--~~--------------------~~ 182 (253)
T d1zs9a1 127 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV--DGHFD--TK--------------------IG 182 (253)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC--SEEEC--GG--------------------GC
T ss_pred ccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhc--ceeec--cc--------------------cc
Confidence 56899999999999999999999999999999999999975321100 00000 00 01
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee----cCCCcHhhhhcccEEEc
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM----GIQGTEVAKESSDIIIL 668 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm----gi~gt~vAkeaaDiil~ 668 (892)
.+-.|+-=....+.+.-..+.++|+||..+|+.+=++|++-... |.....-....++.+|.
T Consensus 183 ~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 183 HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred cCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 12233333344444444467899999999999999999986544 32223334455676664
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.50 E-value=0.036 Score=55.21 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHc
Q 043305 531 PSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALEC 565 (892)
Q Consensus 531 ~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~ 565 (892)
|++.++|+.|+++|++++.+|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78999999999999999999998877777776653
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.30 E-value=0.008 Score=54.89 Aligned_cols=101 Identities=18% Similarity=0.122 Sum_probs=60.0
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceE
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMIC 605 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~ 605 (892)
+|.+.|++.+.++.++++|+++.++||.+...+..+-+.+ .. .......+.. ......
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l--------------------~~-~~~~~~~~~~-~~~~~~ 91 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY--------------------RM-TRKWVEDIAG-VPLVMQ 91 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH--------------------HH-HHHHHHHTTC-CCCSEE
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHH--------------------HH-HhhhhhhcCC-CcEEEe
Confidence 5688999999999999999999999997632111100000 00 0000000000 000111
Q ss_pred EEe-----ccCHhhHHHHHHHHHHc-CCeEEEeCCCCCChHhhhcCCee
Q 043305 606 VMG-----RSSPSDKLLLVQALRKR-GDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 606 V~a-----R~sP~dK~~lV~~Lq~~-g~vVa~tGDG~NDapALk~AdVG 648 (892)
... |..+.-|..+.+.+... .++++|+||-..|+.|.++++|=
T Consensus 92 ~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 92 CQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp EECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 111 22345667777666554 46778999999999999998764
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.91 E-value=0.042 Score=51.95 Aligned_cols=109 Identities=18% Similarity=0.093 Sum_probs=70.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+++.++.+++.|+++.++|+-+..+. .+-+..|+...-. .++.+.+...
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd-----~i~~~~~~~~-------------------- 132 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFT-----EVVTSSSGFK-------------------- 132 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEE-----EEECGGGCCC--------------------
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccc-----cccccccccc--------------------
Confidence 4679999999999999999999998766554 5677888763211 1222221110
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccE
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDI 665 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDi 665 (892)
..-.|+--..+.+.+. -+.+.++||..+|..|=++|++=.. +.++.+..++.-||
T Consensus 133 ~KP~p~~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i-~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 133 RKPNPESMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTH-LFTSIVNLRQVLDI 187 (187)
T ss_dssp CTTSCHHHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEE-ECSCHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEE-EECCCCChHhhcCC
Confidence 0112222223333322 2458999999999999999988753 34677777766554
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.35 E-value=0.035 Score=54.23 Aligned_cols=85 Identities=16% Similarity=0.206 Sum_probs=62.1
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCC----HHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccce
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDN----IQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn----~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~ 604 (892)
+-|++.+.++.+++.|++|..|||.. ..|++.+-+.+|+...+. +-
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~------------------------------~~ 136 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNM------------------------------NP 136 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTB------------------------------CC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccc------------------------------cc
Confidence 45799999999999999999999975 457778878889864332 11
Q ss_pred EEEecc--CHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe
Q 043305 605 CVMGRS--SPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI 647 (892)
Q Consensus 605 ~V~aR~--sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV 647 (892)
.++.+. ....|...|+ + -.++++.||..+|..+-++|++
T Consensus 137 vll~~~~~~K~~rr~~Ik---~-y~I~l~~GD~l~Df~aA~eagi 177 (209)
T d2b82a1 137 VIFAGDKPGQNTKSQWLQ---D-KNIRIFYGDSDNDITAARDVGA 177 (209)
T ss_dssp CEECCCCTTCCCSHHHHH---H-TTEEEEEESSHHHHHHHHHTTC
T ss_pred eEeeCCCCCchHHHHHHH---H-cCeEEEecCCHHHHhHHHHcCC
Confidence 122222 2234555554 3 4699999999999999999985
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=91.86 E-value=0.16 Score=48.34 Aligned_cols=123 Identities=15% Similarity=0.121 Sum_probs=81.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
.+.+++.++++.+++.|+++.++|+-.......+-+..|+...-+ .++...+.. .
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd-----~~~~s~~~~--------------------~ 147 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD-----HLLSVDPVQ--------------------V 147 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----EEEESGGGT--------------------C
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccccc-----ceeeeeeee--------------------c
Confidence 457899999999999999999999999999999998888764321 222222111 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecC---CCcHhhhhcccEEEcCCCchHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGI---QGTEVAKESSDIIILDDNFASVVK 677 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi---~gt~vAkeaaDiil~ddnf~sIv~ 677 (892)
.+-.|+-=..+.+.+.-.-+.++|+||..+|.-+=++|++--..-. ...+-....+|.++.+ +..+.+
T Consensus 148 ~KP~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~--l~el~~ 218 (220)
T d1zrna_ 148 YKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVE 218 (220)
T ss_dssp CTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHT
T ss_pred cccHHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECC--HHHHHh
Confidence 1222333333444444345689999999999999999997644321 1122234458998854 776654
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=91.72 E-value=0.46 Score=46.78 Aligned_cols=62 Identities=19% Similarity=0.279 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCeEEEeCCCC-CChHhhhcCCe-eEee--cCCCcHhhhh---cccEEEcCCCchHHHHHH
Q 043305 616 LLLVQALRKRGDVVAVTGDGT-NDAPALHEADI-GLAM--GIQGTEVAKE---SSDIIILDDNFASVVKVV 679 (892)
Q Consensus 616 ~~lV~~Lq~~g~vVa~tGDG~-NDapALk~AdV-GIAm--gi~gt~vAke---aaDiil~ddnf~sIv~~i 679 (892)
..+.+.+.-..+.++|+||.. ||..+-++|++ ++.+ |....+.... ..|+++. ++..|.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~--~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK--NLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES--SHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEEC--CHHHHHHHh
Confidence 334444433467899999995 69999999996 4444 3222222222 3599986 488887776
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=90.54 E-value=0.41 Score=47.05 Aligned_cols=148 Identities=20% Similarity=0.239 Sum_probs=92.8
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC----CCCCceecch--h-------hhhcCHHHHHH
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD----ATEPNIIEGK--S-------FRALSETQREE 595 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~----~~~~~vi~G~--~-------~~~l~~~e~~~ 595 (892)
+=||+.++++.++++ ....++|---..-.+++|+..|+...... .+...+-+|. + ..+.+.+++.+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e 160 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFR 160 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHH
Confidence 357999999999877 67888888889999999999999622100 0000010110 0 01112233333
Q ss_pred Hhcccc---------cceEEEeccCHhhHHHHHHHHHHc-C-CeEEEeCCCCCChHhhhcCCe--eEeecCCCcHhhhhc
Q 043305 596 IAGEDF---------GMICVMGRSSPSDKLLLVQALRKR-G-DVVAVTGDGTNDAPALHEADI--GLAMGIQGTEVAKES 662 (892)
Q Consensus 596 i~~~~~---------~~~~V~aR~sP~dK~~lV~~Lq~~-g-~vVa~tGDG~NDapALk~AdV--GIAmgi~gt~vAkea 662 (892)
++.+.+ ..+... --..|..+++..-.. + ...+++||++.|..+|+.|.= |+|+.-+|-+-|-..
T Consensus 161 ~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~e 237 (308)
T d1y8aa1 161 KLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKH 237 (308)
T ss_dssp HHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTT
T ss_pred HHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccc
Confidence 322111 022222 124666666554432 2 345889999999999998743 666666899999999
Q ss_pred ccEEEcCCCchHHHHHHH
Q 043305 663 SDIIILDDNFASVVKVVR 680 (892)
Q Consensus 663 aDiil~ddnf~sIv~~i~ 680 (892)
||+.+...+-..+..++.
T Consensus 238 A~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 238 ADVVIISPTAMSEAKVIE 255 (308)
T ss_dssp CSEEEECSSTHHHHHHHH
T ss_pred cceEEeccchhHHHHHHH
Confidence 999999888777766664
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.83 E-value=0.37 Score=45.66 Aligned_cols=96 Identities=14% Similarity=0.145 Sum_probs=63.3
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecC----CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGD----NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGD----n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
.++|++.+.++.++++|+++.++|+- .....+......|+...-+ .++.+.+..
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd-----~i~~s~~~~----------------- 154 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFD-----FLIESCQVG----------------- 154 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCS-----EEEEHHHHS-----------------
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhc-----eeeehhhcc-----------------
Confidence 35799999999999999999999962 3334455555566543111 222221110
Q ss_pred eEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 604 ICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
...-.|+--....+.++-.-+.+.|+||..+|..+=+.|++-
T Consensus 155 ---~~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ 196 (222)
T d1cr6a1 155 ---MIKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMV 196 (222)
T ss_dssp ---CCTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCE
T ss_pred ---CCCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCE
Confidence 112345555556666655567789999999999999999873
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=88.53 E-value=0.1 Score=50.07 Aligned_cols=109 Identities=10% Similarity=0.120 Sum_probs=68.7
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
.++-||+.+.++.|++.|+++.++|+... +..+-+..|+...-. .++.+.+..
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~-----~i~~~~~~~-------------------- 142 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFD-----AIADPAEVA-------------------- 142 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCS-----EECCTTTSS--------------------
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccc-----ccccccccc--------------------
Confidence 45678999999999999999999999754 567778888864321 222222111
Q ss_pred EeccCHhhHHHHHHHHHH---cCCeEEEeCCCCCChHhhhcCCe-eEeecCCCcHhhhhcccEEEc
Q 043305 607 MGRSSPSDKLLLVQALRK---RGDVVAVTGDGTNDAPALHEADI-GLAMGIQGTEVAKESSDIIIL 668 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~---~g~vVa~tGDG~NDapALk~AdV-GIAmgi~gt~vAkeaaDiil~ 668 (892)
...|.- ..+-+.+++ ..+.+.|+||..+|..+-+.|++ .|.++ . ......++.++.
T Consensus 143 --~~KP~~-~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~--~-~~~~~~~~~~~~ 202 (221)
T d1o08a_ 143 --ASKPAP-DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG--R-PEDLGDDIVIVP 202 (221)
T ss_dssp --SCTTST-HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES--C-HHHHCSSSEEES
T ss_pred --ccccCh-HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEEC--C-hhhcccccEEcC
Confidence 112211 113333443 35678999999999999999987 33333 2 222334555554
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=86.67 E-value=0.96 Score=44.26 Aligned_cols=59 Identities=17% Similarity=0.117 Sum_probs=37.6
Q ss_pred CHhhHHHHHHHHHHcCCeEEEeCCCCC-ChHhhhcCCe-eEeec--CCCcHhhhhc---ccEEEcC
Q 043305 611 SPSDKLLLVQALRKRGDVVAVTGDGTN-DAPALHEADI-GLAMG--IQGTEVAKES---SDIIILD 669 (892)
Q Consensus 611 sP~dK~~lV~~Lq~~g~vVa~tGDG~N-DapALk~AdV-GIAmg--i~gt~vAkea---aDiil~d 669 (892)
+|+--..+.+.+.-..+.++|+||..+ |..+-++|++ +|.+. ....+..++. .|+++.+
T Consensus 182 ~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 182 EAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp SHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESC
T ss_pred CcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECC
Confidence 344444555555445678999999976 9999999998 66553 2222222233 3888754
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=86.17 E-value=1.9 Score=41.94 Aligned_cols=39 Identities=13% Similarity=0.069 Sum_probs=29.4
Q ss_pred hhHHHHHHHHHhCCCEEEEEecCC---HHHHHHHHHHcCCCC
Q 043305 531 PSVKDAIRLCRIAGVKVRMVTGDN---IQTARAIALECGILT 569 (892)
Q Consensus 531 ~~v~~aI~~l~~AGI~v~mvTGDn---~~TA~aIA~~~GI~~ 569 (892)
|++.++|+.|+++|++++.+|+.. .......-+++|+.-
T Consensus 22 ~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~ 63 (250)
T d2c4na1 22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 63 (250)
T ss_dssp TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCC
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccc
Confidence 689999999999999999999544 444444445678754
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=86.10 E-value=0.31 Score=46.41 Aligned_cols=125 Identities=15% Similarity=0.149 Sum_probs=76.5
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
.+.|++.+.++.++. +..++|+-....+..+-+.+|+...-. ..+..+.+... -.
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~------------------~~ 139 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFA----PHIYSAKDLGA------------------DR 139 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTT----TCEEEHHHHCT------------------TC
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccc----eeecccccccc------------------cc
Confidence 467888888877754 557899999999999999999975321 12222211100 00
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe---eEeecCCCc----H-hhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI---GLAMGIQGT----E-VAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV---GIAmgi~gt----~-vAkeaaDiil~ddnf~sIv~~i 679 (892)
+.-.|+-=....+.+.-..+.+.|+||..+|..+=+.|++ |++-|.... + .....+|+++.+ ++.+..++
T Consensus 140 ~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll 217 (222)
T d2fdra1 140 VKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISR--MQDLPAVI 217 (222)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHH
T ss_pred cccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECC--HHHHHHHH
Confidence 1112222233334443345789999999999999999996 343231110 1 122348999975 77776665
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=84.80 E-value=0.8 Score=44.08 Aligned_cols=24 Identities=38% Similarity=0.466 Sum_probs=22.4
Q ss_pred CchhHHHHHHHHHhCCCEEEEEec
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTG 552 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTG 552 (892)
+-||+.++++.|+++|+++.++|-
T Consensus 49 l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 49 LRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp BCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred ecccHHHHHHHHHhhCCeEEEecc
Confidence 569999999999999999999995
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=83.99 E-value=1.5 Score=41.76 Aligned_cols=123 Identities=14% Similarity=0.186 Sum_probs=78.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++-+++.+++++++ |+.+.++|..+...+..+-+..|+...-+ .++.+.+...
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd-----~v~~s~~~~~-------------------- 145 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFD-----AVISVDAKRV-------------------- 145 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCS-----EEEEGGGGTC--------------------
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccc-----cccccccccc--------------------
Confidence 56789999999885 78899999999999999888888864321 2333332211
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCC--CcH-------------------------hhh
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQ--GTE-------------------------VAK 660 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~--gt~-------------------------vAk 660 (892)
++-.|+-=...++.+.-.-+.+.++||..+|.-+=++|++-- ++++ +.+ ...
T Consensus 146 ~KP~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~t-v~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (245)
T d1qq5a_ 146 FKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSV-ARVARLSQEALARELVSGTIAPLTMFKALRMREETYA 224 (245)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEE-EEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTS
T ss_pred cCccHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeE-EEEcCCCcccccccccccccccchhhhhhhhhhhhcc
Confidence 111222222333434334467999999999999999998631 1211 111 012
Q ss_pred hcccEEEcCCCchHHHHHHH
Q 043305 661 ESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 661 eaaDiil~ddnf~sIv~~i~ 680 (892)
...|+++. ++..+..+|+
T Consensus 225 ~~pd~~i~--~l~el~~lv~ 242 (245)
T d1qq5a_ 225 EAPDFVVP--ALGDLPRLVR 242 (245)
T ss_dssp CCCSEEES--SGGGHHHHHH
T ss_pred CCCCEEEC--CHHHHHHHHH
Confidence 34799996 4999988875
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.96 E-value=0.63 Score=43.49 Aligned_cols=99 Identities=14% Similarity=0.161 Sum_probs=57.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHH----HHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAI----ALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aI----A~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
.+.|++.++++.|++.|+++.++|......+... -...|+...- ..++.+.+..
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~f-----d~i~~s~~~~----------------- 156 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF-----DFLIESCQVG----------------- 156 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS-----SEEEEHHHHT-----------------
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhc-----cEEEeccccc-----------------
Confidence 3578999999999999999999997543322222 1222222110 0112111110
Q ss_pred eEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe-eEee
Q 043305 604 ICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI-GLAM 651 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV-GIAm 651 (892)
...-+|+-=..+++.+.-..+.+.|+||...|..+-++|++ +|.+
T Consensus 157 ---~~KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v 202 (225)
T d1zd3a1 157 ---MVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 202 (225)
T ss_dssp ---CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred ---cchhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEE
Confidence 01122333333444443334678899999999999999988 4444
|