Citrus Sinensis ID: 043315

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------
MDTTRILQVAKNALSVGMPCFLLSFNFTISLTLVLRENIPGMVGGSFPFLLSMVLSLNYFPVVHALSELNLLTSDLSQLAISCAILHKTIGWLSVALTSAIIKSDKGPAVCWIIKINPEGKPVKEIYVLAIGALVMGFLSDAIGTTYLLGALLMGLIIPPGPPLGIAIIERFELVIFHFFLPFFYIRIGQYTNLSSIQNGSRLISFEIIIGASYLGKFVGSLLIWVFIKASIPNAVIFSCILSLKGIMDLIFILRWRIRKLIDKDTFTLAMLTHTAVTAVRTPLISLYYTPYRKLEITQSMEDRMRTLCTTPVNSELRKNLMENTPITQHKIYVENSKSGEKPRPFVHSLITLLKAFNSSEMSPLCACVLHLVELVGRAAPLLVPHNTHKRKIKENSTDRIMRAMTKFSKSSQVTIQPFILIAPYKTMYESISKLAQDEFIPFIILPSHQSHKMQQGGGFNCKIQNCAPCSVGIYVDRGINDLIEAEDVSERILDDNVINDFKSRNLGNACVLCHHVDVTNTLEAWEVIRSSDNDYDLVVVGKRRRPNSSRERDMTPWTDYEELRVIGDMLASQDFCGGMNPVLVVQ
cccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccHHHHcccccccccHHEEcccccccccccccccHHHHHHHcccccccccEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHccccEEEEEEEEEccccccHHHHHHHHHHccccEEEEcccccccccccccHHHcccccccccEEEEEEcccccccccccccccccccHHHHHHHHHHccccEEEEEEEEEEcHHHHHHHHHHHcccccEEEEcccccccccccccccccccccccccccccccccccccccccEEEEc
ccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHEEEEEEHHHcHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHccccccccccEEccccccccEEEEEEEccHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccEEEEEEEEEEcccccccEEEHcHccccccccccHHHHHHHHHHHHHcccEEEEEEEEEcccHHHHHHHHHHHHHccEEEEEEEccccccccccHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHccccHHHHHHHccccccEEEEEEEEccHHHHHHHHHHHcccccEEEEEccccccccHHcccHcHHHccccccccHHHEccccccccEEEEEEc
MDTTRILQVAKNALSVGMPCFLLSFNFTISLTLVLrenipgmvggsFPFLLSMVLSLNYFPVVHALSELNLLTSDLSQLAISCAILHKTIGWLSVALTSAiiksdkgpavcwiikinpegkpvkEIYVLAIGALVMGFLSDAIGTTYLLGALLMgliippgpplgIAIIERFELVIFHfflpffyirigqytnlssiqngsrLISFEIIIGASYLGKFVGSLLIWVFIKASIPNAVIFSCILSLKGIMDLIFILRWRIRKLIDKDTFTLAMLTHTAVTAVRtplislyytpyrklEITQSMEDRMRTLCTTPVNSELRKNlmentpitQHKIYVensksgekprpFVHSLITLLKafnssemsplCACVLHLVELVgraapllvphnthkrkikeNSTDRIMRAMTkfskssqvtiqpfilIAPYKTMYESISKLaqdefipfiilpshqshkmqqgggfnckiqncapcsvgiyvdrgindlieaedvserilddnvindfksrnlgnacvlchhvdvtnTLEAWEVIRssdndydlvvvgkrrrpnssrerdmtpwtdyeELRVIGDMLAsqdfcggmnpvlvvq
MDTTRILQVAKNALSVGMPCFLLSFNFTISLTLVLRENIPGMVGGSFPFLLSMVLSLNYFPVVHALSELNLLTSDLSQLAISCAILHKTIGWLSVALTSAIiksdkgpaVCWIIKINPEGKPVKEIYVLAIGALVMGFLSDAIGTTYLLGALLMGLIIPPGPPLGIAIIERFELVIFHFFLPFFYIRIGQYTNLSSIQNGSRLISFEIIIGASYLGKFVGSLLIWVFIKASIPNAVIFSCILSLKGIMDLIFILRWRIRKLIDKDTFTLAMLThtavtavrtplislyytpyRKLEITQSMEDRMRTLCTTPVNSELRKNLMENTPITQHKIYVensksgekPRPFVHSLITLLKAFNSSEMSPLCACVLHLVELVGRAapllvphnthkrkikenstdRIMRAMtkfskssqvtiqPFILIAPYKTMYESISKLAQDEFIPFIILPSHQSHKMQQGGGFNCKIQNCAPCSVGIYVDRGINDLIEAEDVSERILDDNVINDFKSRNLGNACVLCHHVDVTNTLEAWEVIrssdndydlvvvgkrrrpnssrerdmtpwtdyEELRVIGDMLASqdfcggmnpvlvvq
MDTTRILQVAKNALSVGMPCFLLSFNFTISLTLVLRENIPGMVGGSFPFLLSMVLSLNYFPVVHALSELNLLTSDLSQLAISCAILHKTIGWLSVALTSAIIKSDKGPAVCWIIKINPEGKPVKEIYVLAIGALVMGFLSDAIGTTYllgallmgliippgpplgiaiiERFELVIFHFFLPFFYIRIGQYTNLSSIQNGSRLISFEIIIGASYLGKFVGSLLIWVFIKASIPNAVIFSCILSLKGIMDLIFILRWRIRKLIDKDTFTLAMLTHTAVTAVRTPLISLYYTPYRKLEITQSMEDRMRTLCTTPVNSELRKNLMENTPITQHKIYVENSKSGEKPRPFVHSLITLLKAFNSSEMSPLCACVLHLVELVGRAAPLLVPHNTHKRKIKENSTDRIMRAMTKFSKSSQVTIQPFILIAPYKTMYESISKLAQDEFIPFIILPSHQSHKMQQGGGFNCKIQNCAPCSVGIYVDRGINDLIEAEDVSERILDDNVINDFKSRNLGNACVLCHHVDVTNTLEAWEVIRSSDNDYDLVVVGKRRRPNSSRERDMTPWTDYEELRVIGDMLASQDFCGGMNPVLVVQ
*****ILQVAKNALSVGMPCFLLSFNFTISLTLVLRENIPGMVGGSFPFLLSMVLSLNYFPVVHALSELNLLTSDLSQLAISCAILHKTIGWLSVALTSAIIKSDKGPAVCWIIKINPEGKPVKEIYVLAIGALVMGFLSDAIGTTYLLGALLMGLIIPPGPPLGIAIIERFELVIFHFFLPFFYIRIGQYTNLSSIQNGSRLISFEIIIGASYLGKFVGSLLIWVFIKASIPNAVIFSCILSLKGIMDLIFILRWRIRKLIDKDTFTLAMLTHTAVTAVRTPLISLYYTPYRKLEITQSMEDRMRTLCTTPV*************ITQHKIYV**********PFVHSLITLLKAFNSSEMSPLCACVLHLVELVGRAAPLLVPHN************************SQVTIQPFILIAPYKTMYESISKLAQDEFIPFIILPSHQSHKMQQGGGFNCKIQNCAPCSVGIYVDRGINDLIEAEDVSERILDDNVINDFKSRNLGNACVLCHHVDVTNTLEAWEVIRSSDNDYDLVVVG**************PWTDYEELRVIGDMLASQDFCGGMNPVLV**
MDTTRILQVAKNALSVGMPCFLLSFNFTISLTLVLRENIPGMVGGSFPFLLSMVLSLNYFPVVHALSELNLLTSDLSQLAISCAILHKTIGWLSVALTSAIIKSDKGPAVCWIIKINPEGKPVKEIYVLAIGALVMGFLSDAIGTTYLLGALLMGLIIPPGPPLGIAIIERFELVIFHFFLPFFYIRIGQYTNLSSIQNGSRLISFEIIIGASYLGKFVGSLLIWVFIKASIPNAVIFSCILSLKGIMDLIFILRWRIRKLIDKDTFTLAMLTHTAVTAVRTPLISLYYTPYR***************************LMENTPITQHKIYV********************************ACVLHLVELVGRAA*********************MRAMTKFSKSSQVTIQPFILIAPYKTMYESISKLAQDEFIPFIILPSHQSHKMQQGGGFNCKIQNCAPCSVGIYVDRGINDLIEAEDVSERILDDNVINDFKSRNLGNACVLCHHVDVTNTLEAWEVIRSSDNDYDLVVVGKRRRPN*SRERDMTPWTDYEELRVIGDMLASQDFCGGMNPVLVVQ
MDTTRILQVAKNALSVGMPCFLLSFNFTISLTLVLRENIPGMVGGSFPFLLSMVLSLNYFPVVHALSELNLLTSDLSQLAISCAILHKTIGWLSVALTSAIIKSDKGPAVCWIIKINPEGKPVKEIYVLAIGALVMGFLSDAIGTTYLLGALLMGLIIPPGPPLGIAIIERFELVIFHFFLPFFYIRIGQYTNLSSIQNGSRLISFEIIIGASYLGKFVGSLLIWVFIKASIPNAVIFSCILSLKGIMDLIFILRWRIRKLIDKDTFTLAMLTHTAVTAVRTPLISLYYTPYRKLEITQSMEDRMRTLCTTPVNSELRKNLMENTPITQHKIYVENSKSGEKPRPFVHSLITLLKAFNSSEMSPLCACVLHLVELVGRAAPLLVPHNTHKRKIKENSTDRIMRAMTKFSKSSQVTIQPFILIAPYKTMYESISKLAQDEFIPFIILPSHQSHKMQQGGGFNCKIQNCAPCSVGIYVDRGINDLIEAEDVSERILDDNVINDFKSRNLGNACVLCHHVDVTNTLEAWEVIRSSDNDYDLVVVGKR**********MTPWTDYEELRVIGDMLASQDFCGGMNPVLVVQ
MDTTRILQVAKNALSVGMPCFLLSFNFTISLTLVLRENIPGMVGGSFPFLLSMVLSLNYFPVVHALSELNLLTSDLSQLAISCAILHKTIGWLSVALTSAIIKSDKGPAVCWIIKINPEGKPVKEIYVLAIGALVMGFLSDAIGTTYLLGALLMGLIIPPGPPLGIAIIERFELVIFHFFLPFFYIRIGQYTNLSSIQNGSRLISFEIIIGASYLGKFVGSLLIWVFIKASIPNAVIFSCILSLKGIMDLIFILRWRIRKLIDKDTFTLAMLTHTAVTAVRTPLISLYYTPYRKLEITQSMEDRMRTLCTTPVNSELRKNLMENTPITQHKIYVENSKSGEKPRPFVHSLITLLKAFNSSEMSPLCACVLHLVELVGRAAPLLVPHNTHKRKIKENSTDRIMRAMTKFSKSSQVTIQPFILIAPYKTMYESISKLAQDEFIPFIILPSHQSHKMQQGGGFNCKIQNCAPCSVGIYVDRGINDLIEAEDVSERILDDNVINDFKSRNLGNACVLCHHVDVTNTLEAWEVIRSSDNDYDLVVVGKRRRPNSSRERDMTPWTDYEELRVIGDMLASQDFCGGMNPVLVVQ
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDTTRILQVAKNALSVGMPCFLLSFNFTISLTLVLRENIPGMVGGSFPFLLSMVLSLNYFPVVHALSELNLLTSDLSQLAISCAILHKTIGWLSVALTSAIIKSDKGPAVCWIIKINPEGKPVKEIYVLAIGALVMGFLSDAIGTTYLLGALLMGLIIPPGPPLGIAIIERFELVIFHFFLPFFYIRIGQYTNLSSIQNGSRLISFEIIIGASYLGKFVGSLLIWVFIKASIPNAVIFSCILSLKGIMDLIFILRWRIRKLIDKDTFTLAMLTHTAVTAVRTPLISLYYTPYRKLEITQSMEDRMRTLCTTPVNSELRKNLMENTPITQHKIYVENSKSGEKPRPFVHSLITLLKAFNSSEMSPLCACVLHLVELVGRAAPLLVPHNTHKRKIKENSTDRIMRAMTKFSKSSQVTIQPFILIAPYKTMYESISKLAQDEFIPFIILPSHQSHKMQQGGGFNCKIQNCAPCSVGIYVDRGINDLIEAEDVSERILDDNVINDFKSRNLGNACVLCHHVDVTNTLEAWEVIRSSDNDYDLVVVGKRRRPNSSRERDMTPWTDYEELRVIGDMLASQDFCGGMNPVLVVQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query587 2.2.26 [Sep-21-2011]
Q9SIT5821 Cation/H(+) antiporter 15 yes no 0.957 0.684 0.273 9e-70
Q9FFR9810 Cation/H(+) antiporter 18 no no 0.800 0.580 0.272 3e-49
Q9FYC1817 Cation/H(+) antiporter 4 no no 0.948 0.681 0.259 7e-46
Q9FGH6857 Cation/H(+) antiporter 25 no no 0.890 0.610 0.255 4e-45
O22920831 Cation/H(+) symporter 13 no no 0.843 0.595 0.256 1e-42
Q9SUQ7820 Cation/H(+) antiporter 17 no no 0.783 0.560 0.248 4e-42
Q9FFB8822 Cation/H(+) antiporter 3 no no 0.952 0.680 0.258 6e-42
Q9LMJ1829 Cation/H(+) antiporter 14 no no 0.928 0.657 0.256 9e-42
Q1HDT3811 Cation/H(+) antiporter 16 no no 0.780 0.564 0.252 2e-41
Q1HDT2859 Cation/H(+) antiporter 24 no no 0.708 0.484 0.266 4e-41
>sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1 Back     alignment and function desciption
 Score =  265 bits (676), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 190/694 (27%), Positives = 329/694 (47%), Gaps = 132/694 (19%)

Query: 1   MDTTRILQVAKNALSVGMPCFLLSFNFTISLTLVLRENIPGMVGGSFPFLLSMVLSLNYF 60
           MD   + +  K AL++ +   +L F    + +  +  +   +  G++   L + LS+  F
Sbjct: 119 MDIMVVRKTGKRALTIAIGGMVLPFLIGAAFSFSMHRSEDHLGQGTYILFLGVALSVTAF 178

Query: 61  PVV-HALSELNLLTSDLSQLAISCAILHKTIGWLSVALTSAIIKSDKG------------ 107
           PV+   L+EL L+ +++ ++++S A+++    W+ +AL  A+ +SDK             
Sbjct: 179 PVLARILAELKLINTEIGRISMSAALVNDMFAWILLALAIALAESDKTSFASLWVMISSA 238

Query: 108 -----------PAVCWIIKINPEGKPVKEIYVLAI--GALVMGFLSDAIGTTYLLGALLM 154
                      P + WII+  PEG+   E ++  I  G ++ GF++DAIGT  + GA + 
Sbjct: 239 VFIAVCVFVVRPGIAWIIRKTPEGENFSEFHICLILTGVMISGFITDAIGTHSVFGAFVF 298

Query: 155 GLIIPPGPPLGIAIIERFELVIFHFFLPFFYIRIGQYTNLSSIQNGSRLISFEIIIGASY 214
           GL+IP GP LG+ +IE+ E  +    LP F+   G  TN+++IQ  +  ++  ++I  + 
Sbjct: 299 GLVIPNGP-LGLTLIEKLEDFVSGLLLPLFFAISGLKTNIAAIQGPATWLTLFLVIFLAC 357

Query: 215 LGKFVGSLLIWVFIKASIPNAVIFSCILSLKGIMDLIFILRWRIRKLIDKDTFTLAMLTH 274
            GK +G++++  F    +   +    +L+ KG++++I +   + +K++D +TF   +L  
Sbjct: 358 AGKVIGTVIVAFFHGMPVREGITLGLLLNTKGLVEMIVLNVGKDQKVLDDETFATMVLVA 417

Query: 275 TAVTAVRTPLISLYYTPYRKLEITQSMEDRMRTLCTTPVNSELRKNLMENTPITQHKIYV 334
             +T V TP++++ Y P +K     S+  + RT+  T  +SELR  +  +TP        
Sbjct: 418 LVMTGVITPIVTILYKPVKK-----SVSYKRRTIQQTKPDSELRVLVCVHTPRN------ 466

Query: 335 ENSKSGEKPRPFVHSLITLLKAFNSSEMSPLCACVLHLVELVGRAAPLLVPHNTHKR--- 391
                       V ++I LL+A + ++ SP+C  VLHLVEL GRA+ +L+ HNT K    
Sbjct: 467 ------------VPTIINLLEASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRP 514

Query: 392 --KIKENSTDRIMRAMTKFSKSSQ-VTIQPFILIAPYKTMYESISKLAQDEFIPFIILPS 448
                +  +D I+ A   + + +  V +QP   I+PY TM+E +  LA+D+ + FII+P 
Sbjct: 515 ALNRTQAQSDHIINAFENYEQHAAFVAVQPLTAISPYSTMHEDVCSLAEDKRVSFIIIPF 574

Query: 449 HQSHKMQQGGG--------FNCKIQNCAPCSVGIYVDRGIN------------------- 481
           H+   +  G           N  +   +PCSVGI VDRG+N                   
Sbjct: 575 HKQQTVDGGMESTNPAYRLVNQNLLENSPCSVGILVDRGLNGATRLNSNTVSLQVAVLFF 634

Query: 482 ------------------------------DLIEAEDVSERILDD--------------- 496
                                         D  EA+  S R  +D               
Sbjct: 635 GGPDDREALAYAWRMAQHPGITLTVLRFIHDEDEADTASTRATNDSDLKIPKMDHRKQRQ 694

Query: 497 ---NVINDFKSRNLGNACVLCHHVDVTNTLEAWEVIRSSDNDYDLVVVGKRRRPNSSRER 553
              + IN F++ N     ++     V+N  E    +RS D+ +DL +VG+    +S    
Sbjct: 695 LDDDYINLFRAENAEYESIVYIEKLVSNGEETVAAVRSMDSSHDLFIVGRGEGMSSPLTA 754

Query: 554 DMTPWTDYEELRVIGDMLASQDFCGGMNPVLVVQ 587
            +T W++  EL  IGD+LAS DF   ++ VLVVQ
Sbjct: 755 GLTDWSECPELGAIGDLLASSDFAATVS-VLVVQ 787
May operate as a cation/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9FFR9|CHX18_ARATH Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 PE=2 SV=1 Back     alignment and function description
>sp|Q9FYC1|CHX4_ARATH Cation/H(+) antiporter 4 OS=Arabidopsis thaliana GN=CHX4 PE=2 SV=1 Back     alignment and function description
>sp|Q9FGH6|CHX25_ARATH Cation/H(+) antiporter 25 OS=Arabidopsis thaliana GN=CHX25 PE=2 SV=1 Back     alignment and function description
>sp|O22920|CHX13_ARATH Cation/H(+) symporter 13 OS=Arabidopsis thaliana GN=CHX13 PE=1 SV=1 Back     alignment and function description
>sp|Q9SUQ7|CHX17_ARATH Cation/H(+) antiporter 17 OS=Arabidopsis thaliana GN=CHX17 PE=1 SV=1 Back     alignment and function description
>sp|Q9FFB8|CHX3_ARATH Cation/H(+) antiporter 3 OS=Arabidopsis thaliana GN=CHX3 PE=2 SV=1 Back     alignment and function description
>sp|Q9LMJ1|CHX14_ARATH Cation/H(+) antiporter 14 OS=Arabidopsis thaliana GN=CHX14 PE=2 SV=1 Back     alignment and function description
>sp|Q1HDT3|CHX16_ARATH Cation/H(+) antiporter 16 OS=Arabidopsis thaliana GN=CHX16 PE=2 SV=1 Back     alignment and function description
>sp|Q1HDT2|CHX24_ARATH Cation/H(+) antiporter 24 OS=Arabidopsis thaliana GN=CHX24 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query587
255576723 789 K(+)/H(+) antiporter, putative [Ricinus 0.967 0.719 0.331 2e-89
255559551 1512 monovalent cation:proton antiporter, put 0.950 0.369 0.322 4e-81
255559563 746 monovalent cation:proton antiporter, put 0.906 0.713 0.309 7e-76
357461421 827 Cation proton exchanger [Medicago trunca 0.884 0.627 0.315 6e-75
356569280 1584 PREDICTED: uncharacterized protein LOC10 0.967 0.358 0.291 1e-70
357432837 871 monovalent cation H+ exchanger 23 [Glyci 0.967 0.652 0.291 2e-70
449459268 837 PREDICTED: cation/H(+) antiporter 15-lik 0.957 0.671 0.281 3e-69
357461423 821 K(+)/H(+) antiporter [Medicago truncatul 0.962 0.688 0.294 5e-69
296088536 820 unnamed protein product [Vitis vinifera] 0.957 0.685 0.285 2e-68
15225447 821 cation/H(+) antiporter 15 [Arabidopsis t 0.957 0.684 0.273 6e-68
>gi|255576723|ref|XP_002529249.1| K(+)/H(+) antiporter, putative [Ricinus communis] gi|223531285|gb|EEF33127.1| K(+)/H(+) antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 221/667 (33%), Positives = 344/667 (51%), Gaps = 99/667 (14%)

Query: 1   MDTTRILQVAKNALSVGMPCFLLSFNFTISLTLVLRENIPGMVGG-SFPFLLSMVLSLNY 59
           MD   +L  AK    +G+  ++  F  T+  +  + + +   + G +    L   +S+ Y
Sbjct: 129 MDVKTLLSSAKKIWPIGLCSYIFPFVITLIFSSAMYKELSACLKGMNMVTFLCGAISVTY 188

Query: 60  FPVV-HALSELNLLTSDLSQLAISCAIL---------------------HKTIGWLSVAL 97
           FPVV   + EL+LLT++L QLA+S ++L                     H    +L++  
Sbjct: 189 FPVVAQFIEELDLLTTELGQLALSSSMLIQMTSHAITIIGVAVTRDSYIHSIYYFLAICA 248

Query: 98  TSAIIKSDKGPAVCWIIKINPEGKPVKEIYVLAI--GALVMGFLSDAIGTTYLLGALLMG 155
           T  +      PA+   IKI PEGKP+KE+YV+AI  G L+M  ++D +   +L GALL G
Sbjct: 249 TIILAVYVIRPAILLSIKITPEGKPIKEVYVIAILIGTLIMAVITDVMWYDFLSGALLTG 308

Query: 156 LIIPPGPPLGIAIIERFELVIFHFFLPFFYIRIGQYTNLSSIQNGSRLISFEIIIGASYL 215
           LIIP GPPLG  ++E+ EL++   FLP F++++G  T++SS+QN   +    +++    L
Sbjct: 309 LIIPDGPPLGAILVEKSELMVMEIFLPLFFVQVGYLTDVSSLQNIKAVTVVLLLVTVCCL 368

Query: 216 GKFVGSLLIWVFIKASIPNAVIFSCILSLKGIMDLIFILRWRIRKLIDKDTFTLAMLTHT 275
            K +G+LL  +++      A+    IL+ KG++DL    R++ R +++K  +T  +L + 
Sbjct: 369 TKIIGTLLASLYLNIKFQTALFLGLILNFKGVVDLTTFHRFQSRNILEKRCYTALVLFNL 428

Query: 276 AVTAVRTPLISLYYTPYRKLEITQSMEDRMRTLCTTPVNSELRKNLMENTPITQHKIYVE 335
            V A+  PLI  +Y P  +L    S     R L +TP   ELR             IY E
Sbjct: 429 LVVAIFYPLIEFFYKPRIRLAGRYSKTKYSRALQSTPQAEELR---------ALTCIYHE 479

Query: 336 NSKSGEKPRPFVHSLITLLKAFNSSEMSPLCACVLHLVELVGRAAPLLVPHNTHKRKIKE 395
           N+  G         +I LL A N   +SPLCA V+H+V+LVGR AP L+P+    R    
Sbjct: 480 NNVPG---------MIALLDASNHRAISPLCAYVVHVVDLVGRTAPSLLPYKGKTRMSNH 530

Query: 396 N---STDRIMRAMTKFSK--SSQVTIQPFILIAPYKTMYESISKLAQDEFIPFIILPSHQ 450
           +   S+ RIM A   +SK  S +V++QPF ++AP++TM+  I  LA++  IPFII+P H+
Sbjct: 531 DPCSSSSRIMSAFINYSKTASGRVSLQPFTMVAPFRTMHNIICNLAEENLIPFIIVPFHE 590

Query: 451 SHKM----QQGG---GFNCKIQNCAPCSVGIYVDRGINDLIE-----------AED---- 488
           +  +    +Q G    FN ++Q  APC+VGI  DRG+   +            A+D    
Sbjct: 591 NQILDLNSKQKGVLQDFNSQLQAHAPCTVGILYDRGLQPRLNKCRIVVVFIGGADDREAL 650

Query: 489 ----------------------------VSERILDDNVINDFKSRNLGNACVLCHHVDVT 520
                                       ++E  LD+ ++ +F   NL N  +LC  V V 
Sbjct: 651 ALAIRMSGNPDMNITMLRINSAKDKDRSITEAQLDELLVKEFIDNNLNNPRILCQQVSVN 710

Query: 521 NTLEAWEVIRSSDNDYDLVVVGKRRRPNSSRERDMTPWTDYEELRVIGDMLASQDFCGGM 580
           ++L+    ++S   +YDLV+VGK     +  E+D+T W +Y EL VIGDMLAS DF   M
Sbjct: 711 DSLQMLNAVQSLRRNYDLVMVGKNSGARAF-EKDLTEWVEYAELGVIGDMLASTDFYNEM 769

Query: 581 NPVLVVQ 587
             VLV++
Sbjct: 770 TSVLVME 776

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255559551|ref|XP_002520795.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223539926|gb|EEF41504.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255559563|ref|XP_002520801.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223539932|gb|EEF41510.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357461421|ref|XP_003600992.1| Cation proton exchanger [Medicago truncatula] gi|355490040|gb|AES71243.1| Cation proton exchanger [Medicago truncatula] Back     alignment and taxonomy information
>gi|356569280|ref|XP_003552831.1| PREDICTED: uncharacterized protein LOC100781310 [Glycine max] Back     alignment and taxonomy information
>gi|357432837|gb|AET79251.1| monovalent cation H+ exchanger 23 [Glycine max] Back     alignment and taxonomy information
>gi|449459268|ref|XP_004147368.1| PREDICTED: cation/H(+) antiporter 15-like [Cucumis sativus] gi|449513321|ref|XP_004164295.1| PREDICTED: cation/H(+) antiporter 15-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357461423|ref|XP_003600993.1| K(+)/H(+) antiporter [Medicago truncatula] gi|355490041|gb|AES71244.1| K(+)/H(+) antiporter [Medicago truncatula] Back     alignment and taxonomy information
>gi|296088536|emb|CBI37527.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|15225447|ref|NP_178985.1| cation/H(+) antiporter 15 [Arabidopsis thaliana] gi|75313480|sp|Q9SIT5.1|CHX15_ARATH RecName: Full=Cation/H(+) antiporter 15; AltName: Full=Protein CATION/H+ EXCHANGER 15; Short=AtCHX15 gi|4558666|gb|AAD22684.1| putative Na/H antiporter [Arabidopsis thaliana] gi|61658321|gb|AAX49544.1| cation/H+ exchanger [Arabidopsis thaliana] gi|330251152|gb|AEC06246.1| cation/H(+) antiporter 15 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query587
TAIR|locus:2054152821 CHX15 "cation/hydrogen exchang 0.289 0.207 0.348 1.3e-50
TAIR|locus:2128484820 CHX17 "cation/H+ exchanger 17" 0.674 0.482 0.244 2.9e-36
TAIR|locus:2007392829 CHX14 "cation/hydrogen exchang 0.224 0.159 0.351 8.2e-36
TAIR|locus:2024578811 CHX16 "cation/H+ exchanger 16" 0.603 0.436 0.246 2.6e-35
TAIR|locus:2082142817 CHX4 "cation/H+ exchanger 4" [ 0.349 0.250 0.294 9.9e-35
TAIR|locus:2172631822 CHX3 "cation/H+ exchanger 3" [ 0.224 0.160 0.305 3.9e-34
TAIR|locus:2160457810 CHX18 "cation/H+ exchanger 18" 0.633 0.459 0.241 4.4e-33
TAIR|locus:2166168859 CHX24 "cation/H+ exchanger 24" 0.487 0.332 0.265 8.3e-32
TAIR|locus:2084370 842 CHX20 "cation/H+ exchanger 20" 0.562 0.391 0.232 1.9e-31
TAIR|locus:2060827831 ATCHX13 [Arabidopsis thaliana 0.224 0.158 0.337 1.2e-28
TAIR|locus:2054152 CHX15 "cation/hydrogen exchanger 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 255 (94.8 bits), Expect = 1.3e-50, Sum P(4) = 1.3e-50
 Identities = 67/192 (34%), Positives = 104/192 (54%)

Query:   307 TLCTTPVNSEL---RKNLMENTPITQHKIYVENSKSGEKPRPFVHSLITLLKAFNSSEMS 363
             T+   PV   +   R+ + +  P ++ ++ V        PR  V ++I LL+A + ++ S
Sbjct:   429 TILYKPVKKSVSYKRRTIQQTKPDSELRVLV----CVHTPRN-VPTIINLLEASHPTKRS 483

Query:   364 PLCACVLHLVELVGRAAPLLVPHNTHKR-KIKENST----DRIMRAMTKFSKSSQ-VTIQ 417
             P+C  VLHLVEL GRA+ +L+ HNT K  +   N T    D I+ A   + + +  V +Q
Sbjct:   484 PICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHAAFVAVQ 543

Query:   418 PFILIAPYKTMYESISKLAQDEFIPFIILPSHQSHKMQQG-----GGFNCKIQNC---AP 469
             P   I+PY TM+E +  LA+D+ + FII+P H+   +  G       +    QN    +P
Sbjct:   544 PLTAISPYSTMHEDVCSLAEDKRVSFIIIPFHKQQTVDGGMESTNPAYRLVNQNLLENSP 603

Query:   470 CSVGIYVDRGIN 481
             CSVGI VDRG+N
Sbjct:   604 CSVGILVDRGLN 615
GO:0006812 "cation transport" evidence=IEA;IC
GO:0009507 "chloroplast" evidence=ISM
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0035725 "sodium ion transmembrane transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005451 "monovalent cation:hydrogen antiporter activity" evidence=NAS
GO:0006885 "regulation of pH" evidence=IMP
GO:0009827 "plant-type cell wall modification" evidence=RCA
GO:0009860 "pollen tube growth" evidence=RCA
TAIR|locus:2128484 CHX17 "cation/H+ exchanger 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007392 CHX14 "cation/hydrogen exchanger 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024578 CHX16 "cation/H+ exchanger 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082142 CHX4 "cation/H+ exchanger 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172631 CHX3 "cation/H+ exchanger 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160457 CHX18 "cation/H+ exchanger 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166168 CHX24 "cation/H+ exchanger 24" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084370 CHX20 "cation/H+ exchanger 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060827 ATCHX13 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ATCHX15
ATCHX15; monovalent cation-proton antiporter/ sodium-hydrogen antiporter; member of Putative Na+/H+ antiporter family (821 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
KEA3
KEA3; potassium ion transmembrane transporter/ potassium-hydrogen antiporter; member of Putativ [...] (637 aa)
      • 0.679
NHX1
NHX1 (NA+/H+ EXCHANGER); protein binding / sodium ion transmembrane transporter/ sodium-hydroge [...] (538 aa)
      • 0.657
CAX2
CAX2 (CATION EXCHANGER 2); calcium-cation antiporter/ calcium-hydrogen antiporter; low affinity [...] (441 aa)
      • 0.657
CAX1
CAX1 (cation exchanger 1); calcium ion transmembrane transporter/ calcium-cation antiporter/ ca [...] (475 aa)
      • 0.657
ATHSP22.0
ATHSP22.0; Columbia endomembrane-localized small heat shock protein (195 aa)
      • 0.589
AT4G26470
calcium ion binding; calcium ion binding; FUNCTIONS IN- calcium ion binding; INVOLVED IN- N-ter [...] (231 aa)
      • 0.569
AT1G62820
calmodulin, putative; calmodulin, putative; FUNCTIONS IN- calcium ion binding; INVOLVED IN- res [...] (148 aa)
      • 0.569
AT1G18530
calmodulin, putative; calmodulin, putative; FUNCTIONS IN- calcium ion binding; INVOLVED IN- bio [...] (157 aa)
      • 0.563
AT3G10300
calcium-binding EF hand family protein; calcium-binding EF hand family protein; FUNCTIONS IN- c [...] (335 aa)
      • 0.562
NHX2
NHX2 (SODIUM HYDROGEN EXCHANGER 2); sodium ion transmembrane transporter/ sodium-hydrogen antip [...] (546 aa)
      • 0.536

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query587
PLN03159 832 PLN03159, PLN03159, cation/H(+) antiporter 15; Pro 6e-70
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 9e-15
PLN03159832 PLN03159, PLN03159, cation/H(+) antiporter 15; Pro 1e-13
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 4e-13
>gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
 Score =  241 bits (616), Expect = 6e-70
 Identities = 152/521 (29%), Positives = 271/521 (52%), Gaps = 64/521 (12%)

Query: 1   MDTTRILQVAKNALSVGMPCFLLSFNFTISLTLVLRENIPGMVGGSFPFLLSMVLSLNYF 60
           MD + I +  K AL++ +    L F   ++ + +  +    +  G+F   L + LS+  F
Sbjct: 123 MDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFHQVSRNVHQGTFILFLGVALSVTAF 182

Query: 61  PVV-HALSELNLLTSDLSQLAISCAILHKTIGWLSVALTSAIIKSDKG------------ 107
           PV+   L+E+ L+ ++L ++A+S A+++    W+ +AL  A+ ++D              
Sbjct: 183 PVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAENDSTSLASLWVLLSSV 242

Query: 108 -----------PAVCWIIKINPEGKPVKEIYVLAI--GALVMGFLSDAIGTTYLLGALLM 154
                      P + WII+  PEG+   E Y+  I  G ++ GF++DAIGT  + GA + 
Sbjct: 243 AFVLFCFYVVRPGIWWIIRRTPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVF 302

Query: 155 GLIIPPGPPLGIAIIERFELVIFHFFLPFFYIRIGQYTNLSSIQNGSRLISFEIIIGASY 214
           GL+IP GP LG+ +IE+ E  +    LP F+   G  TN++ IQ  +      ++I  + 
Sbjct: 303 GLVIPNGP-LGVTLIEKLEDFVSGLLLPLFFAISGLKTNVTKIQGPATWGLLVLVIIMAS 361

Query: 215 LGKFVGSLLIWVFIKASIPNAVIFSCILSLKGIMDLIFILRWRIRKLIDKDTFTLAMLTH 274
            GK +G+++I  F        +    +++ KG++++I +   R ++++D ++F + +L  
Sbjct: 362 AGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQEVLDDESFAVMVLVA 421

Query: 275 TAVTAVRTPLISLYYTPYRKLEITQSMEDRMRTLCTTPVNSELRKNLMENTPITQHKIYV 334
            A+TA+ TP++++ Y P R+L     +  + RT+  +  ++ELR  +  +TP        
Sbjct: 422 VAMTALITPVVTVVYRPARRL-----VGYKRRTIQRSKHDAELRMLVCVHTPRN------ 470

Query: 335 ENSKSGEKPRPFVHSLITLLKAFNSSEMSPLCACVLHLVELVGRAAPLLVPHNTHKRKIK 394
                       V ++I LL+A + ++ SP+C  VLHLVEL GRA+ +L+ HNT K    
Sbjct: 471 ------------VPTIINLLEASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRP 518

Query: 395 ENS-----TDRIMRAMTKFSK-SSQVTIQPFILIAPYKTMYESISKLAQDEFIPFIILPS 448
             +     +D I+ A   + + +  V++QP   I+PY TM+E +  LA+D+ +  II+P 
Sbjct: 519 ALNRTQAQSDHIINAFENYEQHAGCVSVQPLTAISPYSTMHEDVCNLAEDKRVSLIIIPF 578

Query: 449 HQSHKMQQG--------GGFNCKIQNCAPCSVGIYVDRGIN 481
           H+   +  G         G N  +   APCSVGI VDRG++
Sbjct: 579 HKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLS 619

Length = 832
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information
>gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 587
PLN03159832 cation/H(+) antiporter 15; Provisional 100.0
KOG1650769 consensus Predicted K+/H+-antiporter [Inorganic io 100.0
PRK10669558 putative cation:proton antiport protein; Provision 100.0
PRK03562621 glutathione-regulated potassium-efflux system prot 100.0
PRK03659601 glutathione-regulated potassium-efflux system prot 100.0
COG0475397 KefB Kef-type K+ transport systems, membrane compo 100.0
PRK05326562 potassium/proton antiporter; Reviewed 99.94
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 99.94
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 99.92
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 99.91
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 99.64
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.56
TIGR00844810 c_cpa1 na(+)/h(+) antiporter. This model is specif 99.33
TIGR00840559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.29
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 99.29
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.2
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 99.01
COG3263574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 98.55
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 98.35
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 98.25
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 98.22
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 98.21
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 98.15
cd01987124 USP_OKCHK USP domain is located between the N-term 98.0
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 97.91
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 97.91
KOG1965575 consensus Sodium/hydrogen exchanger protein [Inorg 97.84
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 97.72
PF00582140 Usp: Universal stress protein family; InterPro: IP 97.72
cd00293130 USP_Like Usp: Universal stress protein family. The 97.72
PRK15456142 universal stress protein UspG; Provisional 97.66
PRK15005144 universal stress protein F; Provisional 97.63
PF03812314 KdgT: 2-keto-3-deoxygluconate permease; InterPro: 97.62
PRK15118144 universal stress global response regulator UspA; P 97.45
PRK11175305 universal stress protein UspE; Provisional 97.4
TIGR00793314 kdgT 2-keto-3-deoxygluconate transporter. This fam 97.3
PRK09982142 universal stress protein UspD; Provisional 97.3
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 97.21
PRK11175305 universal stress protein UspE; Provisional 97.17
PRK10116142 universal stress protein UspC; Provisional 97.13
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 96.97
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 96.95
KOG4505467 consensus Na+/H+ antiporter [Inorganic ion transpo 96.84
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 96.78
PRK05274326 2-keto-3-deoxygluconate permease; Provisional 96.44
PRK03562 621 glutathione-regulated potassium-efflux system prot 96.37
PF03390414 2HCT: 2-hydroxycarboxylate transporter family; Int 96.25
PRK03659 601 glutathione-regulated potassium-efflux system prot 96.09
PRK05326562 potassium/proton antiporter; Reviewed 96.07
COG3493438 CitS Na+/citrate symporter [Energy production and 96.04
COG0475397 KefB Kef-type K+ transport systems, membrane compo 95.98
PRK10669558 putative cation:proton antiport protein; Provision 95.96
COG2855334 Predicted membrane protein [Function unknown] 95.68
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 95.59
TIGR00698335 conserved hypothetical integral membrane protein. 95.01
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 94.9
COG0589154 UspA Universal stress protein UspA and related nuc 94.52
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 94.49
PLN03159 832 cation/H(+) antiporter 15; Provisional 94.28
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 94.24
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 93.69
PF03977360 OAD_beta: Na+-transporting oxaloacetate decarboxyl 91.67
TIGR03136399 malonate_biotin Na+-transporting malonate decarbox 91.04
PRK12652357 putative monovalent cation/H+ antiporter subunit E 90.89
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 90.64
PF03956191 DUF340: Membrane protein of unknown function (DUF3 89.79
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 89.76
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 88.85
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 85.83
TIGR00841286 bass bile acid transporter. Functionally character 85.77
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 85.69
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 84.72
KOG1966670 consensus Sodium/hydrogen exchanger protein [Inorg 83.39
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 83.22
PRK10490 895 sensor protein KdpD; Provisional 82.06
PF03547385 Mem_trans: Membrane transport protein; InterPro: I 80.07
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
Probab=100.00  E-value=9.1e-121  Score=1051.10  Aligned_cols=560  Identities=34%  Similarity=0.636  Sum_probs=511.9

Q ss_pred             CCchHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHhhHHHH-HHHhhccccCCchHHH
Q 043315            1 MDTTRILQVAKNALSVGMPCFLLSFNFTISLTLVLRENIPGMVGGSFPFLLSMVLSLNYFPVV-HALSELNLLTSDLSQL   79 (587)
Q Consensus         1 mD~~~l~~~~~~a~~ig~~~~~ip~~~g~~~~~~l~~~~~~~~~~~~~l~lg~~ls~Ts~pVv-~iL~el~ll~s~~Grl   79 (587)
                      ||++.+||++|+++.+|++++++||++|++++++++....+.......+++|+++|+||+||+ ++|+|+|+++|+.||+
T Consensus       123 ~Dl~~lr~~~k~a~~ia~~~~ilpf~lg~~~~~~l~~~~~~~~~~~~~l~~g~alS~Ts~pVv~riL~Elkll~s~~Grl  202 (832)
T PLN03159        123 MDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFHQVSRNVHQGTFILFLGVALSVTAFPVLARILAEIKLINTELGRI  202 (832)
T ss_pred             CcHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHhhHHHHHHHHHHcCcccCcHHHH
Confidence            699999999999999999999999999999988884421111223467899999999999999 9999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh--c------C---------------hhHHHHHHHHHcCCCCcchhHHHHHH--HHH
Q 043315           80 AISCAILHKTIGWLSVALTSAIIK--S------D---------------KGPAVCWIIKINPEGKPVKEIYVLAI--GAL  134 (587)
Q Consensus        80 als~avi~Di~~~ill~i~~~~~~--s------~---------------~rp~~~~l~~r~~~g~~~~e~~i~~i--~~~  134 (587)
                      ++++++++|+++|++++++.+..+  +      +               +||++.|+.||++++++.+|.+++++  +++
T Consensus       203 aLsaavv~Dl~~~ilLav~~~l~~~~~~~~~~l~~~l~~~~f~~~~~~v~r~~~~~~~r~~~~~~~~~e~~v~~il~~vl  282 (832)
T PLN03159        203 AMSAALVNDMCAWILLALAIALAENDSTSLASLWVLLSSVAFVLFCFYVVRPGIWWIIRRTPEGETFSEFYICLILTGVM  282 (832)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCcccchhHHHHHHHH
Confidence            999999999999999988766541  1      1               68999999999999888888887665  778


Q ss_pred             HHHHHHHHhChhHHHHHHHhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhcccccccccccc-hhHHHHHHHHHHH
Q 043315          135 VMGFLSDAIGTTYLLGALLMGLIIPPGPPLGIAIIERFELVIFHFFLPFFYIRIGQYTNLSSIQNG-SRLISFEIIIGAS  213 (587)
Q Consensus       135 ~~a~lae~~G~~~ilGAFlaGL~lp~~~p~~~~l~ekl~~~~~~~flPlFF~~~Gl~~dl~~l~~~-~~~~~~~~l~~~a  213 (587)
                      ++++++|.+|+|+++|||++|+++|+. |+++++.+|++++++++|+|+||+++||++|+..+.+. .|.+ ++++++++
T Consensus       283 ~~a~lae~~Gl~~ilGAFlaGl~lp~~-~~~~~l~ekle~~~~~lflPlFFv~vGl~idl~~l~~~~~~~~-~~~liv~a  360 (832)
T PLN03159        283 ISGFITDAIGTHSVFGAFVFGLVIPNG-PLGVTLIEKLEDFVSGLLLPLFFAISGLKTNVTKIQGPATWGL-LVLVIIMA  360 (832)
T ss_pred             HHHHHHHHhCccHHHHHHHHhhccCCc-chHHHHHHHHHHHHHHHHHHHHHHHhhheeeHHHhcCchHHHH-HHHHHHHH
Confidence            899999999999999999999999985 89999999999999999999999999999999887654 4555 66777888


Q ss_pred             HHHHHHHHHHHHHHhCCChHHHHHHHHHhhhhhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 043315          214 YLGKFVGSLLIWVFIKASIPNAVIFSCILSLKGIMDLIFILRWRIRKLIDKDTFTLAMLTHTAVTAVRTPLISLYYTPYR  293 (587)
Q Consensus       214 ~~~K~l~~~l~~~~~~~~~~~a~~lglll~~kG~~~li~~~i~~~~gli~~~~f~~lvl~~lvtt~i~~plv~~ly~p~~  293 (587)
                      +++|+++++++++++|+|++|++.+|++||+||+++++++++|++.|+++++.|++++++++++|.+++|++.++|||+|
T Consensus       361 ~~gK~~g~~l~a~~~g~~~~eal~lG~lm~~kG~~~Lii~~ig~~~gvi~~~~f~~lVl~avl~T~i~~Plv~~ly~p~r  440 (832)
T PLN03159        361 SAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQEVLDDESFAVMVLVAVAMTALITPVVTVVYRPAR  440 (832)
T ss_pred             HHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccHHHHHHHHHHHhcCccCchhhhHHHHHHHHHHHHHHHHHHHHhCHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccCCCCccccceeeecCCcccccccccccCCCCCCCCCHHHHHHHHHHhcCCCCCCcEEEEEEee
Q 043315          294 KLEITQSMEDRMRTLCTTPVNSELRKNLMENTPITQHKIYVENSKSGEKPRPFVHSLITLLKAFNSSEMSPLCACVLHLV  373 (587)
Q Consensus       294 ~~~~~~~~~~~~r~~~~~~~~~elril~c~~~~~~~~~v~~~~~~~~~~~~~~v~~li~Ll~~~~~~~~sp~~v~~lhlv  373 (587)
                      ||     ..||+|++|+.++++|+|||+|         +|+|+         |++++|+|++++++++++|+++|++||+
T Consensus       441 k~-----~~~~~r~i~~~~~~~elriL~c---------v~~~~---------~v~~li~Lle~s~~t~~sp~~vy~lhLv  497 (832)
T PLN03159        441 RL-----VGYKRRTIQRSKHDAELRMLVC---------VHTPR---------NVPTIINLLEASHPTKRSPICIYVLHLV  497 (832)
T ss_pred             hh-----ccccccccccCCCCCceeEEEE---------eccCC---------cHHHHHHHHHhcCCCCCCCceEEEEEEE
Confidence            99     9999999999999999999999         99999         9999999999999999999999999999


Q ss_pred             eccCCCcccccccccccc-c----cCCCchhHHHHHHHhhhc-CCceEEEEEEEEecCCChHHHHHHHHhhcCCCEEEec
Q 043315          374 ELVGRAAPLLVPHNTHKR-K----IKENSTDRIMRAMTKFSK-SSQVTIQPFILIAPYKTMYESISKLAQDEFIPFIILP  447 (587)
Q Consensus       374 el~~r~s~~l~~~~~~~~-~----~~~~~~~~i~~~f~~~~~-~~~v~v~~~~~vs~~~~m~~dI~~~A~e~~~~lIilp  447 (587)
                      ||+||++|++++|+.+++ .    ....++|+++++|++|++ .+.|+|+++|++|||++||+|||++|+|+++++||+|
T Consensus       498 eL~~r~~~~l~~h~~~~~~~~~~~~~~~~~~~i~~af~~~~~~~~~v~v~~~t~vs~~~~mh~dIc~~A~d~~~slIilp  577 (832)
T PLN03159        498 ELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHAGCVSVQPLTAISPYSTMHEDVCNLAEDKRVSLIIIP  577 (832)
T ss_pred             eecCCCccceeeeecccccccccccccccccHHHHHHHHHHhhcCceEEEEEEEEeCcccHHHHHHHHHHhcCCCEEEEC
Confidence            999999999999987654 1    133558999999999965 4689999999999999999999999999999999999


Q ss_pred             cCCCccccccc---------hhHHHhhccCCCcEEEEEeCCCC----------------------CC-------------
Q 043315          448 SHQSHKMQQGG---------GFNCKIQNCAPCSVGIYVDRGIN----------------------DL-------------  483 (587)
Q Consensus       448 ~h~~~~~~dg~---------~~n~~vl~~apcsVgIlvdRg~~----------------------dd-------------  483 (587)
                      |||+|+. ||+         ++|+|||++||||||||||||..                      ||             
T Consensus       578 fhk~~~~-dg~~~~~~~~~r~~n~~VL~~ApCsVgIlVDRg~~~~~~~~~~~~~~~v~~~F~GG~DDREALa~a~rma~~  656 (832)
T PLN03159        578 FHKQQTV-DGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGATRLASNQVSHHVAVLFFGGPDDREALAYAWRMSEH  656 (832)
T ss_pred             CCCccCC-CCCccccCchHHHHHHHHHccCCCCEEEEEeCCCCccccccccccceeEEEEecCCcchHHHHHHHHHHhcC
Confidence            9999997 764         89999999999999999999832                      66             


Q ss_pred             ----------c-----cc-------------------cCchhhcchHHHHHHHHhhccCCCceEEEEEEecChHHHHHHH
Q 043315          484 ----------I-----EA-------------------EDVSERILDDNVINDFKSRNLGNACVLCHHVDVTNTLEAWEVI  529 (587)
Q Consensus       484 ----------~-----~~-------------------~~~~~~~~d~~~~~~~~~~~~~~~~v~y~e~~v~~~~~~~~~i  529 (587)
                                .     .+                   +++.|+++|+++++|||.++..+++|.|.||.|+|++||+++|
T Consensus       657 p~v~lTVirf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~D~~~~~ef~~~~~~~~~v~y~E~~V~~~~e~~~~l  736 (832)
T PLN03159        657 PGITLTVMRFIPGEDAAPTASQPASSPSDPRIPTVETDGKKERQLDEEYINEFRARNAGNESIVYTEKVVSNGEETVAAI  736 (832)
T ss_pred             CCeEEEEEEEEcccccccccccccccccccccccccccchhHHHHHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHHH
Confidence                      0     00                   0245888999999999999998999999999999999999999


Q ss_pred             HhhcCCCcEEEEcccCCCCCccccCCCCCCCCCcccccccccccCCCCCCCccEEEeC
Q 043315          530 RSSDNDYDLVVVGKRRRPNSSRERDMTPWTDYEELRVIGDMLASQDFCGGMNPVLVVQ  587 (587)
Q Consensus       530 ~~~~~~~dLviVGr~~~~~s~~~~gl~~w~e~~eLG~iGd~Las~d~~~~~~svLVvq  587 (587)
                      |+++++|||+||||+|+.+|++|+||+||+||||||+|||+|||+|| ++++||||||
T Consensus       737 ~~~~~~ydL~iVGr~~~~~~~~~~gL~~w~e~pELG~iGD~LaS~d~-~~~~SVLVvQ  793 (832)
T PLN03159        737 RSMDSAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDF-AATVSVLVVQ  793 (832)
T ss_pred             HHhhccCcEEEEecCCCCCcchhccccccccCCccchhhhHHhcCCC-CCceeEEEEE
Confidence            99999999999999998889999999999999999999999999999 9999999999

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PRK05274 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>COG3493 CitS Na+/citrate symporter [Energy production and conversion] Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>PF03977 OAD_beta: Na+-transporting oxaloacetate decarboxylase beta subunit; InterPro: IPR005661 Members of this family are integral membrane proteins Back     alignment and domain information
>TIGR03136 malonate_biotin Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00841 bass bile acid transporter Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query587
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 53.3 bits (127), Expect = 2e-07
 Identities = 77/539 (14%), Positives = 163/539 (30%), Gaps = 112/539 (20%)

Query: 112 WIIKINPEGKPVKEIYVLAIGALVM---GFLSDAIGTTYLLGALLMGLIIPPGPPLGIAI 168
           W +    E     E+    +  ++     FL   I T              P     + I
Sbjct: 69  WTLLSKQE-----EMVQKFVEEVLRINYKFLMSPIKTEQ----------RQPSMMTRMYI 113

Query: 169 IERFELV-IFHFFLPFFYIRIGQYTN----LSSIQNGSRLISFEIIIGASYLGKFVGSLL 223
            +R  L      F  +   R+  Y      L  ++    ++    I G    GK    + 
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL----IDGVLGSGKTW--VA 167

Query: 224 IWVF----IKASIPNAVI---FSCILSLKGIMDLIFILRWRIRK----LIDKDTFTLAML 272
           + V     ++  +   +         S + +++++  L ++I        D  +  + + 
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH-SSNIKLR 226

Query: 273 THTAVTAVRTPLISLYYTPYRK-L---------EITQSMEDRMRTLCTTPVNSELRKNLM 322
            H+    +R  L S    PY   L         +   +     + L TT    ++   L 
Sbjct: 227 IHSIQAELRRLLKS---KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR-FKQVTDFLS 282

Query: 323 ENTPITQHKIYVENSKSGEKPRPFVHSLITLLKAFN-SSEMSPLCACVLH--LVELVGRA 379
             T  T H     +S +             LLK  +   +  P      +   + ++   
Sbjct: 283 AAT--TTHISLDHHSMTLTPDE----VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE- 335

Query: 380 APLLVPHNTHKRKIKENSTDRIMRAMTKFSKSSQVTIQPFILIAPYKTMYESISKLAQDE 439
              +          K  + D++   +    +SS   ++P    A Y+ M++ +S      
Sbjct: 336 --SIRDGLATWDNWKHVNCDKLTTII----ESSLNVLEP----AEYRKMFDRLSVFPPSA 385

Query: 440 FIPFIIL--------PSHQSHKMQQGGGFNCKIQNCAPCSVGIYVDRGINDLIEAEDVSE 491
            IP I+L         S     + +   ++   +     ++ I     +   ++ E+   
Sbjct: 386 HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP-SIYLELKVKLENEYA 444

Query: 492 ---RILD-DNVINDFKSRNLGNACV-------LCHHVDVTNTLEAWEVIRSSDNDYD--- 537
               I+D  N+   F S +L    +       + HH+      E   + R    D+    
Sbjct: 445 LHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE 504

Query: 538 --LVVVGKRRRPNSSRERDMTPWTDYEEL---------RVIGDMLASQDFCGGMNPVLV 585
             +         + S    +     Y+           R++  +L   DF   +   L+
Sbjct: 505 QKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAIL---DFLPKIEENLI 560
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query587
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.87
3s3t_A146 Nucleotide-binding protein, universal stress PROT 97.94
3loq_A294 Universal stress protein; structural genomics, PSI 97.91
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 97.9
3mt0_A290 Uncharacterized protein PA1789; structural genomic 97.86
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 97.85
3dlo_A155 Universal stress protein; unknown function, struct 97.8
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 97.79
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 97.76
3fg9_A156 Protein of universal stress protein USPA family; A 97.75
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 97.72
3fdx_A143 Putative filament protein / universal stress PROT; 97.71
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 97.7
3tnj_A150 Universal stress protein (USP); structural genomic 97.61
2z08_A137 Universal stress protein family; uncharacterized c 97.59
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 97.57
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 97.37
3olq_A319 Universal stress protein E; structural genomics, P 97.12
1q77_A138 Hypothetical protein AQ_178; structural genomics, 96.84
3mt0_A290 Uncharacterized protein PA1789; structural genomic 96.57
3loq_A294 Universal stress protein; structural genomics, PSI 96.49
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 96.39
3olq_A319 Universal stress protein E; structural genomics, P 96.26
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 94.52
3zux_A332 Transporter, ASBTNM; transport protein, membrane p 93.4
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 92.74
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
Probab=99.87  E-value=3.5e-23  Score=218.01  Aligned_cols=264  Identities=11%  Similarity=0.053  Sum_probs=193.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHhhHHHH-HHHhhcccc-CCchHHHHHHHHHHHHH
Q 043315           12 NALSVGMPCFLLSFNFTISLTLVLRENIPGMVGGSFPFLLSMVLSLNYFPVV-HALSELNLL-TSDLSQLAISCAILHKT   89 (587)
Q Consensus        12 ~a~~ig~~~~~ip~~~g~~~~~~l~~~~~~~~~~~~~l~lg~~ls~Ts~pVv-~iL~el~ll-~s~~Grlals~avi~Di   89 (587)
                      .+...++.|+++|++++..    +...      ......-..+.+.|+.+.. .+|..++.. .+..++.+++.|++||+
T Consensus        96 ~p~~aAlgGmivP~~iy~~----~~~~------~~~~~~gw~ip~ATdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl  165 (388)
T 1zcd_A           96 FPVIAAIGGMIVPALLYLA----FNYA------DPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDL  165 (388)
T ss_dssp             HHHHHHHHHTTTTHHHHGG----GCCS------STTHHHHTSSSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH----HhcC------ChhhhhhhHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHH
Confidence            3789999999999988422    2111      1234455555566888888 888887664 45556999999999999


Q ss_pred             HHHHHHHHHHHHhhc--C-----hhHHHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHhChhHHHHHHHhhhhcCCCC
Q 043315           90 IGWLSVALTSAIIKS--D-----KGPAVCWIIKINPEGKPVKEIYVLAIGALVMGFLSDAIGTTYLLGALLMGLIIPPGP  162 (587)
Q Consensus        90 ~~~ill~i~~~~~~s--~-----~rp~~~~l~~r~~~g~~~~e~~i~~i~~~~~a~lae~~G~~~ilGAFlaGL~lp~~~  162 (587)
                      .+|++++++....-+  +     ...+..++.+|..    +++...+.++.+++.+.++..|+|+++|+|++|+++|+.+
T Consensus       166 ~aiivIAvfyt~~~~~~~l~~~~~~~~~~~~l~r~~----v~~~~~y~~lgl~~w~~~~~sGvHatigg~l~Gl~ip~~~  241 (388)
T 1zcd_A          166 GAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCG----ARRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLKE  241 (388)
T ss_dssp             HHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHTT----CCCTHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHSCCCG
T ss_pred             HHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHhccCCC
Confidence            999999988642111  1     2222334445532    1222233332335556679999999999999999999853


Q ss_pred             ----CchhHHHHHHHHHHHHHHHHHH-HHHhcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh---------
Q 043315          163 ----PLGIAIIERFELVIFHFFLPFF-YIRIGQYTNLSSIQNGSRLISFEIIIGASYLGKFVGSLLIWVFI---------  228 (587)
Q Consensus       163 ----p~~~~l~ekl~~~~~~~flPlF-F~~~Gl~~dl~~l~~~~~~~~~~~l~~~a~~~K~l~~~l~~~~~---------  228 (587)
                          +..+++++++++++..+++|+| |+..|+++|...+....-.. ...+++..++||.+|++..++..         
T Consensus       242 ~~~~~~~~~le~~l~p~v~~~ilPlFaFanaGv~l~~~~~~~l~~~~-~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp  320 (388)
T 1zcd_A          242 KHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSIL-PLGIIAGLLIGKPLGISLFCWLALRLKLAHLP  320 (388)
T ss_dssp             GGSSCHHHHHHHHHHHHHHHTHHHHHHHHHCCCCCSSSCCCTHHHHS-STTTTHHHHHTTGGGSTTHHHHTSSCTTTCCC
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeecccchhhccChH-HHHHHHHHHHHHHHHHHHHHHHHHHhccCcCC
Confidence                3578999999999999999999 99999999985332110011 12344455889999966666666         


Q ss_pred             -CCChHHHHHHHHHhhhhhhHHHHHHHHhhhcCC--CCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 043315          229 -KASIPNAVIFSCILSLKGIMDLIFILRWRIRKL--IDKDTFTLAMLTHTAVTAVRTPLISLYYT  290 (587)
Q Consensus       229 -~~~~~~a~~lglll~~kG~~~li~~~i~~~~gl--i~~~~f~~lvl~~lvtt~i~~plv~~ly~  290 (587)
                       |++|+|+..+|.+++.+++++++++++|++.+.  +.++.+..++++++++++++|.++++.++
T Consensus       321 ~g~~~~~~~~vg~L~gigftmsL~Ia~laf~~~~~~~~~~ak~~il~~s~~s~i~g~~~L~~~~~  385 (388)
T 1zcd_A          321 EGTTYQQIMVVGILCGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLR  385 (388)
T ss_dssp             CSCCGGGGTTHHHHTTCCHHHHHHHHHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTTC-
T ss_pred             CCCCHHHHHHHHHHhccchHHHHHHHHHhccCCchhhHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence             999999999999999999999999999999876  35777999999999999988888876553
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query587
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 98.18
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 98.13
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 97.97
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 97.86
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 97.65
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 97.03
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: Hypothetical protein TTHA0895
species: Thermus thermophilus [TaxId: 274]

Probab=98.18  E-value=8.5e-07  Score=76.89  Aligned_cols=129  Identities=16%  Similarity=0.110  Sum_probs=76.8

Q ss_pred             cceeeecCCcccccccccccCCCCCCCCCHHHHHHHHHHhcCCCCCCcEEEEEEeeeccCCCccccccccccccccCCCc
Q 043315          318 RKNLMENTPITQHKIYVENSKSGEKPRPFVHSLITLLKAFNSSEMSPLCACVLHLVELVGRAAPLLVPHNTHKRKIKENS  397 (587)
Q Consensus       318 ril~c~~~~~~~~~v~~~~~~~~~~~~~~v~~li~Ll~~~~~~~~sp~~v~~lhlvel~~r~s~~l~~~~~~~~~~~~~~  397 (587)
                      |||+|         +..-+         +-..+++.+..+...  ...+++++|+++-.....    .+...++ .....
T Consensus         3 ~Ilv~---------~D~s~---------~s~~a~~~a~~~a~~--~~~~l~ll~V~~~~~~~~----~~~~~~~-~~~~~   57 (135)
T d2z3va1           3 TILLA---------YDGSE---------HARRAAEVAKAEAEA--HGARLIVVHAYEPVPDYL----GEPFFEE-ALRRR   57 (135)
T ss_dssp             EEEEE---------CCSSH---------HHHHHHHHHHHHHHH--HTCEEEEEEEECCCCTTC----CTTHHHH-HHHHH
T ss_pred             EEEEE---------ECCCH---------HHHHHHHHHHHHHHH--cCCEEEEEEEecCCcccc----ccchhHH-HHHHH
Confidence            68888         76655         666666666555422  225789999987432211    1110000 01111


Q ss_pred             hhHHHHHHHhhhcCCceEEEEEEEEecCCChHHHHHHHHhhcCCCEEEeccCCCccccc---cchhHHHhhccCCCcEEE
Q 043315          398 TDRIMRAMTKFSKSSQVTIQPFILIAPYKTMYESISKLAQDEFIPFIILPSHQSHKMQQ---GGGFNCKIQNCAPCSVGI  474 (587)
Q Consensus       398 ~~~i~~~f~~~~~~~~v~v~~~~~vs~~~~m~~dI~~~A~e~~~~lIilp~h~~~~~~d---g~~~n~~vl~~apcsVgI  474 (587)
                      .++..+.++.+.+..++........+  .+..+.||+.|+++++|+||+|+|++.....   | ++-+++++++||+|-|
T Consensus        58 ~~~~~~~l~~~~~~~~~~~~~~~~~~--g~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~G-s~~~~ll~~~~~pVlv  134 (135)
T d2z3va1          58 LERAEGVLEEARALTGVPKEDALLLE--GVPAEAILQAARAEKADLIVMGTRGLGALGSLFLG-SQSQRVVAEAPCPVLL  134 (135)
T ss_dssp             HHHHHHHHHHHHHHHCCCGGGEEEEE--SCHHHHHHHHHHHTTCSEEEEESSCSSSCBCSSCB-HHHHHHHHHCSSCEEE
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEEc--CChHHHHHHHhhhhheeeEEeccCCCCcccccccC-cHHHHHHHhCCCCEEe
Confidence            22333333333222222222233333  6778999999999999999999998765522   3 7788999999999866
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure